Query 008457
Match_columns 564
No_of_seqs 444 out of 5498
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 04:00:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008457.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008457hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v97_A Ribosomal RNA large sub 99.8 3.1E-19 1.1E-23 194.8 29.1 170 328-527 502-682 (703)
2 4gek_A TRNA (CMO5U34)-methyltr 99.8 2.7E-20 9.2E-25 179.5 17.7 162 74-241 69-245 (261)
3 3bzb_A Uncharacterized protein 99.8 8.9E-20 3.1E-24 178.5 19.4 200 337-561 45-262 (281)
4 3e23_A Uncharacterized protein 99.8 1.4E-19 4.7E-24 169.6 19.5 164 74-270 42-206 (211)
5 2a14_A Indolethylamine N-methy 99.8 2.1E-20 7.1E-25 181.4 13.2 190 35-242 9-239 (263)
6 3h2b_A SAM-dependent methyltra 99.8 1.6E-19 5.4E-24 168.1 15.9 181 32-243 4-184 (203)
7 2gb4_A Thiopurine S-methyltran 99.8 1.4E-19 4.8E-24 173.5 15.8 178 37-240 28-226 (252)
8 3lcc_A Putative methyl chlorid 99.8 1.9E-19 6.5E-24 171.6 16.5 183 40-250 31-216 (235)
9 3dtn_A Putative methyltransfer 99.8 6.5E-19 2.2E-23 167.8 17.2 164 73-244 42-217 (234)
10 3ou2_A SAM-dependent methyltra 99.8 1.4E-18 4.6E-23 163.5 19.0 156 73-240 44-204 (218)
11 3hnr_A Probable methyltransfer 99.8 2.7E-19 9.3E-24 168.7 14.2 163 67-241 37-201 (220)
12 2kw5_A SLR1183 protein; struct 99.8 5.4E-19 1.8E-23 164.3 14.3 169 74-268 29-197 (202)
13 1pjz_A Thiopurine S-methyltran 99.8 5.6E-19 1.9E-23 164.2 12.4 148 69-242 16-177 (203)
14 1xtp_A LMAJ004091AAA; SGPP, st 99.8 1.3E-18 4.5E-23 167.8 15.4 155 66-241 84-238 (254)
15 3dli_A Methyltransferase; PSI- 99.8 9.6E-19 3.3E-23 167.3 14.1 145 74-241 40-184 (240)
16 2ex4_A Adrenal gland protein A 99.8 7.6E-19 2.6E-23 168.1 13.0 146 75-241 79-225 (241)
17 3ujc_A Phosphoethanolamine N-m 99.8 2.4E-18 8.1E-23 167.1 16.4 162 63-241 43-206 (266)
18 3dlc_A Putative S-adenosyl-L-m 99.8 6.2E-19 2.1E-23 165.9 11.8 168 65-241 34-203 (219)
19 3sm3_A SAM-dependent methyltra 99.8 6.3E-18 2.1E-22 160.9 18.8 168 74-247 29-213 (235)
20 2p7i_A Hypothetical protein; p 99.8 1.4E-18 4.8E-23 167.0 13.6 155 74-240 41-198 (250)
21 3l8d_A Methyltransferase; stru 99.8 7.2E-18 2.5E-22 161.3 18.6 157 65-242 45-201 (242)
22 3e8s_A Putative SAM dependent 99.8 3.5E-18 1.2E-22 161.6 15.9 198 31-241 11-209 (227)
23 3g5l_A Putative S-adenosylmeth 99.8 1.9E-18 6.4E-23 166.7 14.0 168 66-242 35-217 (253)
24 4htf_A S-adenosylmethionine-de 99.8 7.1E-19 2.4E-23 172.8 10.1 161 74-241 67-232 (285)
25 3pfg_A N-methyltransferase; N, 99.8 3.8E-18 1.3E-22 165.6 14.7 155 74-239 49-235 (263)
26 2i62_A Nicotinamide N-methyltr 99.8 6.7E-18 2.3E-22 163.9 16.1 186 41-243 18-241 (265)
27 3dh0_A SAM dependent methyltra 99.8 6.9E-18 2.4E-22 158.9 15.3 153 65-241 27-181 (219)
28 2xvm_A Tellurite resistance pr 99.8 1.5E-17 5.2E-22 153.9 16.9 149 67-241 24-173 (199)
29 2p8j_A S-adenosylmethionine-de 99.8 1.8E-17 6.2E-22 154.8 17.2 182 74-268 22-206 (209)
30 3mgg_A Methyltransferase; NYSG 99.8 9.3E-19 3.2E-23 171.2 8.5 167 62-241 24-198 (276)
31 1y8c_A S-adenosylmethionine-de 99.8 1.3E-17 4.5E-22 159.8 16.4 159 75-241 37-225 (246)
32 2o57_A Putative sarcosine dime 99.7 1.2E-17 4.3E-22 164.9 15.6 161 65-241 68-234 (297)
33 3g2m_A PCZA361.24; SAM-depende 99.7 1.1E-17 3.7E-22 165.5 15.1 171 65-243 73-276 (299)
34 1vl5_A Unknown conserved prote 99.7 3.8E-18 1.3E-22 165.3 11.1 163 65-242 27-191 (260)
35 1ri5_A MRNA capping enzyme; me 99.7 1E-17 3.6E-22 165.5 14.4 205 31-241 21-250 (298)
36 2g72_A Phenylethanolamine N-me 99.7 2.3E-17 7.9E-22 162.3 16.5 161 65-242 59-257 (289)
37 3thr_A Glycine N-methyltransfe 99.7 1E-17 3.5E-22 165.2 13.6 145 37-188 23-178 (293)
38 3jwh_A HEN1; methyltransferase 99.7 1.6E-17 5.3E-22 156.3 14.0 159 70-241 24-192 (217)
39 3ege_A Putative methyltransfer 99.7 3.3E-18 1.1E-22 165.7 9.0 162 61-244 20-181 (261)
40 1xxl_A YCGJ protein; structura 99.7 8.2E-18 2.8E-22 160.7 11.6 162 65-241 11-174 (239)
41 3bkw_A MLL3908 protein, S-aden 99.7 4.1E-17 1.4E-21 156.1 15.7 166 65-240 33-213 (243)
42 3jwg_A HEN1, methyltransferase 99.7 2.7E-17 9.1E-22 154.9 14.1 159 70-241 24-192 (219)
43 2aot_A HMT, histamine N-methyl 99.7 3E-17 1E-21 161.7 15.1 156 74-238 51-218 (292)
44 3bus_A REBM, methyltransferase 99.7 1.6E-17 5.5E-22 162.0 12.6 165 65-242 51-217 (273)
45 2p35_A Trans-aconitate 2-methy 99.7 2.9E-17 9.9E-22 158.8 14.1 160 65-236 23-185 (259)
46 3ccf_A Cyclopropane-fatty-acyl 99.7 2.2E-17 7.5E-22 161.6 13.2 162 66-242 48-211 (279)
47 3bxo_A N,N-dimethyltransferase 99.7 2.6E-17 9E-22 157.1 13.3 105 74-189 39-145 (239)
48 3ggd_A SAM-dependent methyltra 99.7 3E-17 1E-21 157.4 13.2 162 74-241 55-219 (245)
49 1kpg_A CFA synthase;, cyclopro 99.7 2.1E-17 7.4E-22 162.4 12.2 162 67-241 56-228 (287)
50 2yqz_A Hypothetical protein TT 99.7 4.3E-17 1.5E-21 158.0 13.9 152 73-238 37-193 (263)
51 3kkz_A Uncharacterized protein 99.7 6E-17 2E-21 157.4 14.9 156 66-240 36-195 (267)
52 1wzn_A SAM-dependent methyltra 99.7 2.1E-16 7E-21 152.2 18.0 108 73-187 39-147 (252)
53 1nkv_A Hypothetical protein YJ 99.7 3.6E-17 1.2E-21 157.9 12.4 158 64-239 25-185 (256)
54 3f4k_A Putative methyltransfer 99.7 1E-16 3.5E-21 154.8 15.5 154 67-239 37-194 (257)
55 4hg2_A Methyltransferase type 99.7 3E-17 1E-21 157.5 11.6 102 74-189 38-139 (257)
56 3g07_A 7SK snRNA methylphospha 99.7 1.2E-17 4E-22 164.4 8.0 159 74-241 45-269 (292)
57 3i9f_A Putative type 11 methyl 99.7 7.9E-17 2.7E-21 145.2 12.7 135 72-241 14-148 (170)
58 2pxx_A Uncharacterized protein 99.7 9.6E-17 3.3E-21 150.4 13.6 139 42-188 7-162 (215)
59 3cc8_A Putative methyltransfer 99.7 2.7E-16 9.4E-21 148.9 16.0 159 66-242 24-186 (230)
60 2vdw_A Vaccinia virus capping 99.7 5.2E-17 1.8E-21 160.0 11.2 165 74-240 47-245 (302)
61 3hem_A Cyclopropane-fatty-acyl 99.7 1.8E-16 6.2E-21 157.0 15.1 162 67-241 64-243 (302)
62 1vlm_A SAM-dependent methyltra 99.7 3.3E-16 1.1E-20 147.4 15.8 143 75-242 47-189 (219)
63 3d2l_A SAM-dependent methyltra 99.7 1.8E-16 6.1E-21 151.7 14.1 160 74-241 32-223 (243)
64 3gu3_A Methyltransferase; alph 99.7 3.5E-17 1.2E-21 160.6 9.3 109 72-187 19-128 (284)
65 3dp7_A SAM-dependent methyltra 99.7 1E-16 3.6E-21 162.7 13.1 162 74-240 178-341 (363)
66 4fsd_A Arsenic methyltransfera 99.7 4.7E-17 1.6E-21 166.4 10.3 157 74-240 82-250 (383)
67 3vc1_A Geranyl diphosphate 2-C 99.7 1.4E-16 4.9E-21 158.4 13.2 158 69-242 110-270 (312)
68 3cgg_A SAM-dependent methyltra 99.7 6.9E-16 2.4E-20 142.0 16.6 149 74-265 45-194 (195)
69 3bkx_A SAM-dependent methyltra 99.7 1.1E-16 3.8E-21 156.3 11.0 170 68-241 36-219 (275)
70 2fk8_A Methoxy mycolic acid sy 99.7 5.7E-16 2E-20 154.5 15.9 162 66-240 81-253 (318)
71 3i53_A O-methyltransferase; CO 99.7 2.4E-16 8.3E-21 158.2 13.2 152 74-241 168-321 (332)
72 1ve3_A Hypothetical protein PH 99.7 9.2E-16 3.1E-20 145.1 16.4 108 74-187 37-144 (227)
73 3ocj_A Putative exported prote 99.7 2.4E-16 8.1E-21 156.3 12.5 161 74-240 117-290 (305)
74 3m70_A Tellurite resistance pr 99.7 7.2E-16 2.5E-20 151.4 15.3 144 71-240 116-259 (286)
75 3ofk_A Nodulation protein S; N 99.7 1.5E-15 5.2E-20 142.5 16.4 113 68-188 44-157 (216)
76 3gwz_A MMCR; methyltransferase 99.7 5.7E-16 1.9E-20 157.6 14.2 159 68-240 195-355 (369)
77 2qe6_A Uncharacterized protein 99.7 1E-15 3.6E-20 148.6 15.5 154 74-239 76-240 (274)
78 3iv6_A Putative Zn-dependent a 99.7 6E-16 2.1E-20 147.8 13.2 141 32-187 9-150 (261)
79 2r3s_A Uncharacterized protein 99.6 1.7E-15 5.8E-20 152.3 15.4 157 74-240 164-322 (335)
80 2gs9_A Hypothetical protein TT 99.6 8.6E-16 2.9E-20 143.6 11.4 135 75-232 36-171 (211)
81 3reo_A (ISO)eugenol O-methyltr 99.6 1.5E-15 5.1E-20 154.3 13.2 154 73-241 201-355 (368)
82 3g5t_A Trans-aconitate 3-methy 99.6 5.4E-16 1.8E-20 153.3 9.7 110 74-186 35-150 (299)
83 1qzz_A RDMB, aclacinomycin-10- 99.6 2.6E-15 9E-20 153.3 15.0 163 66-241 173-339 (374)
84 3mcz_A O-methyltransferase; ad 99.6 1.3E-15 4.3E-20 154.3 12.2 157 74-238 177-336 (352)
85 1x19_A CRTF-related protein; m 99.6 2.2E-15 7.6E-20 152.8 14.0 164 66-240 181-347 (359)
86 3lst_A CALO1 methyltransferase 99.6 1.7E-15 5.7E-20 153.0 12.6 158 67-240 176-335 (348)
87 3p9c_A Caffeic acid O-methyltr 99.6 2E-15 7E-20 153.0 13.2 154 73-241 199-353 (364)
88 3bgv_A MRNA CAP guanine-N7 met 99.6 3.6E-15 1.2E-19 148.3 14.7 165 74-239 33-230 (313)
89 1yzh_A TRNA (guanine-N(7)-)-me 99.6 6E-15 2E-19 138.2 15.2 142 65-239 32-180 (214)
90 4e2x_A TCAB9; kijanose, tetron 99.6 6.2E-16 2.1E-20 160.3 9.0 157 65-241 97-253 (416)
91 3orh_A Guanidinoacetate N-meth 99.6 8.3E-16 2.8E-20 146.2 9.0 106 74-184 59-169 (236)
92 4a6d_A Hydroxyindole O-methylt 99.6 3.6E-15 1.2E-19 150.5 14.1 155 74-240 178-333 (353)
93 4dcm_A Ribosomal RNA large sub 99.6 2.9E-13 1E-17 137.0 28.0 147 328-502 184-336 (375)
94 1tw3_A COMT, carminomycin 4-O- 99.6 3.7E-15 1.3E-19 151.4 13.3 163 66-241 174-339 (360)
95 2ip2_A Probable phenazine-spec 99.6 3.7E-15 1.3E-19 149.7 12.6 161 66-240 159-321 (334)
96 1xdz_A Methyltransferase GIDB; 99.6 4.3E-14 1.5E-18 134.8 18.8 134 74-242 69-203 (240)
97 2fca_A TRNA (guanine-N(7)-)-me 99.6 9.6E-15 3.3E-19 136.6 13.0 118 65-185 29-153 (213)
98 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.8E-14 6.3E-19 130.5 14.2 137 65-241 15-153 (178)
99 1zx0_A Guanidinoacetate N-meth 99.6 9.6E-15 3.3E-19 139.0 12.5 110 74-186 59-171 (236)
100 3evz_A Methyltransferase; NYSG 99.6 3.2E-14 1.1E-18 134.7 16.1 134 74-240 54-205 (230)
101 2avn_A Ubiquinone/menaquinone 99.6 2.1E-15 7E-20 145.9 7.8 102 75-188 54-155 (260)
102 3dmg_A Probable ribosomal RNA 99.6 1.1E-12 3.9E-17 132.8 28.0 150 326-503 187-343 (381)
103 4df3_A Fibrillarin-like rRNA/T 99.6 5.3E-14 1.8E-18 131.4 16.6 143 70-239 72-215 (233)
104 3e05_A Precorrin-6Y C5,15-meth 99.6 4.3E-14 1.5E-18 131.3 15.8 133 65-236 30-163 (204)
105 1fp1_D Isoliquiritigenin 2'-O- 99.6 5E-15 1.7E-19 150.9 9.7 151 74-240 208-359 (372)
106 3htx_A HEN1; HEN1, small RNA m 99.6 2.6E-14 8.9E-19 152.6 15.4 168 68-242 714-899 (950)
107 1fp2_A Isoflavone O-methyltran 99.6 8.5E-15 2.9E-19 148.1 10.4 147 74-240 187-340 (352)
108 3grz_A L11 mtase, ribosomal pr 99.6 3.4E-14 1.2E-18 132.1 13.6 125 74-240 59-184 (205)
109 2zfu_A Nucleomethylin, cerebra 99.5 4.9E-14 1.7E-18 132.0 14.7 112 74-239 66-177 (215)
110 3mti_A RRNA methylase; SAM-dep 99.5 2E-14 6.8E-19 131.3 11.6 109 74-187 21-137 (185)
111 3mq2_A 16S rRNA methyltransfer 99.5 4.6E-15 1.6E-19 139.4 7.1 155 70-243 22-186 (218)
112 3lpm_A Putative methyltransfer 99.5 5.3E-14 1.8E-18 135.8 14.6 154 353-529 29-203 (259)
113 3fpf_A Mtnas, putative unchara 99.5 9.2E-14 3.2E-18 133.7 15.2 106 70-186 117-223 (298)
114 3njr_A Precorrin-6Y methylase; 99.5 1.8E-13 6.1E-18 127.0 16.5 134 66-242 46-181 (204)
115 1af7_A Chemotaxis receptor met 99.5 5.3E-14 1.8E-18 135.6 13.3 137 44-184 71-251 (274)
116 3dxy_A TRNA (guanine-N(7)-)-me 99.5 2.5E-14 8.4E-19 134.0 10.2 112 74-186 33-151 (218)
117 3p2e_A 16S rRNA methylase; met 99.5 1.5E-14 5E-19 136.3 8.7 165 65-243 15-187 (225)
118 3bus_A REBM, methyltransferase 99.5 1.8E-13 6.1E-18 133.2 16.2 152 357-527 42-216 (273)
119 3giw_A Protein of unknown func 99.5 3E-14 1E-18 135.5 10.0 157 74-241 77-247 (277)
120 1jsx_A Glucose-inhibited divis 99.5 1.7E-13 5.8E-18 127.5 15.0 99 75-184 65-164 (207)
121 1fbn_A MJ fibrillarin homologu 99.5 1.1E-13 3.9E-18 130.9 13.9 144 69-240 68-212 (230)
122 3g5l_A Putative S-adenosylmeth 99.5 3.1E-13 1.1E-17 129.9 17.0 142 368-532 36-221 (253)
123 3q87_B N6 adenine specific DNA 99.5 8.2E-14 2.8E-18 125.3 11.8 122 74-242 22-150 (170)
124 2b3t_A Protein methyltransfera 99.5 1.3E-13 4.6E-18 134.3 14.2 129 74-238 108-260 (276)
125 3kkz_A Uncharacterized protein 99.5 1.9E-13 6.4E-18 132.6 15.0 136 373-528 43-197 (267)
126 1nkv_A Hypothetical protein YJ 99.5 1.2E-13 4.1E-18 133.1 13.0 141 365-525 25-185 (256)
127 3f4k_A Putative methyltransfer 99.5 4.1E-13 1.4E-17 129.3 16.5 144 365-528 34-197 (257)
128 3ujc_A Phosphoethanolamine N-m 99.5 2.1E-13 7E-18 132.1 14.0 148 357-526 36-205 (266)
129 2nxc_A L11 mtase, ribosomal pr 99.5 1.1E-13 3.6E-18 133.1 11.8 125 74-240 119-243 (254)
130 3m33_A Uncharacterized protein 99.5 7.8E-14 2.7E-18 131.7 9.9 119 74-240 47-166 (226)
131 3vc1_A Geranyl diphosphate 2-C 99.5 5.5E-13 1.9E-17 132.4 16.4 142 366-527 106-269 (312)
132 3g89_A Ribosomal RNA small sub 99.5 2.3E-13 8E-18 130.1 13.2 136 74-244 79-215 (249)
133 3dlc_A Putative S-adenosyl-L-m 99.5 1E-13 3.5E-18 130.0 10.3 142 364-525 32-201 (219)
134 2o57_A Putative sarcosine dime 99.5 5E-13 1.7E-17 131.8 15.5 148 361-527 63-234 (297)
135 1xxl_A YCGJ protein; structura 99.5 8.9E-13 3E-17 125.6 16.5 146 356-526 5-173 (239)
136 3dh0_A SAM dependent methyltra 99.5 3.4E-13 1.2E-17 126.6 13.3 134 374-527 35-181 (219)
137 1zg3_A Isoflavanone 4'-O-methy 99.5 5.8E-14 2E-18 142.3 8.5 148 74-240 192-346 (358)
138 1nt2_A Fibrillarin-like PRE-rR 99.5 2.5E-13 8.4E-18 126.5 12.0 108 72-185 54-161 (210)
139 1kpg_A CFA synthase;, cyclopro 99.5 1.6E-12 5.3E-17 127.5 18.1 146 359-526 47-227 (287)
140 3fzg_A 16S rRNA methylase; met 99.5 2.4E-14 8.2E-19 127.2 4.5 105 74-185 48-152 (200)
141 3eey_A Putative rRNA methylase 99.5 3E-13 1E-17 124.7 12.2 111 74-187 21-141 (197)
142 3sm3_A SAM-dependent methyltra 99.5 3.3E-13 1.1E-17 128.0 12.7 151 376-543 30-223 (235)
143 1dus_A MJ0882; hypothetical pr 99.5 4.3E-13 1.5E-17 123.1 12.7 118 63-188 40-160 (194)
144 3lpm_A Putative methyltransfer 99.5 1.3E-12 4.4E-17 126.0 16.6 139 70-242 43-202 (259)
145 3dmg_A Probable ribosomal RNA 99.5 7.3E-13 2.5E-17 134.2 15.4 108 74-187 232-342 (381)
146 4dzr_A Protein-(glutamine-N5) 99.5 4E-14 1.4E-18 132.3 5.7 139 66-239 20-190 (215)
147 3p9n_A Possible methyltransfer 99.4 2.3E-13 7.9E-18 124.7 10.4 110 74-187 43-155 (189)
148 3evz_A Methyltransferase; NYSG 99.4 5.9E-13 2E-17 126.0 12.6 131 375-525 54-204 (230)
149 1vl5_A Unknown conserved prote 99.4 1.2E-12 4.1E-17 126.3 15.0 131 375-526 36-189 (260)
150 2ex4_A Adrenal gland protein A 99.4 6.8E-13 2.3E-17 126.5 13.1 132 376-527 79-225 (241)
151 2yxd_A Probable cobalt-precorr 99.4 8.6E-13 2.9E-17 119.9 13.0 134 63-241 23-157 (183)
152 3mgg_A Methyltransferase; NYSG 99.4 1.9E-12 6.4E-17 126.1 16.2 147 361-527 22-198 (276)
153 1l3i_A Precorrin-6Y methyltran 99.4 6.2E-13 2.1E-17 121.8 12.0 136 63-240 21-159 (192)
154 4htf_A S-adenosylmethionine-de 99.4 1.8E-12 6.2E-17 126.9 16.0 133 376-527 68-232 (285)
155 3hem_A Cyclopropane-fatty-acyl 99.4 2.7E-12 9.3E-17 126.8 17.4 144 362-527 58-243 (302)
156 3lbf_A Protein-L-isoaspartate 99.4 7.2E-13 2.5E-17 123.5 12.0 112 62-187 64-176 (210)
157 3id6_C Fibrillarin-like rRNA/T 99.4 2.5E-12 8.5E-17 120.5 15.5 109 72-186 73-182 (232)
158 1yb2_A Hypothetical protein TA 99.4 4E-13 1.4E-17 130.8 10.2 131 68-240 103-236 (275)
159 2ozv_A Hypothetical protein AT 99.4 2.9E-12 1E-16 123.4 15.8 116 69-184 30-169 (260)
160 4dcm_A Ribosomal RNA large sub 99.4 8.4E-13 2.9E-17 133.7 12.2 115 66-185 213-334 (375)
161 1g8a_A Fibrillarin-like PRE-rR 99.4 2.9E-12 1E-16 121.0 15.1 106 73-184 71-177 (227)
162 3bwc_A Spermidine synthase; SA 99.4 1.7E-12 5.8E-17 128.0 13.9 143 74-244 94-243 (304)
163 1dus_A MJ0882; hypothetical pr 99.4 4.1E-12 1.4E-16 116.5 15.6 164 323-517 9-173 (194)
164 3jwg_A HEN1, methyltransferase 99.4 1.8E-12 6E-17 121.7 13.1 134 375-524 28-189 (219)
165 3uwp_A Histone-lysine N-methyl 99.4 5.1E-13 1.7E-17 133.2 9.8 118 65-189 163-292 (438)
166 3u81_A Catechol O-methyltransf 99.4 5.5E-12 1.9E-16 118.5 16.5 114 70-186 53-171 (221)
167 1xtp_A LMAJ004091AAA; SGPP, st 99.4 2E-12 6.8E-17 124.3 13.7 139 367-527 84-238 (254)
168 3ckk_A TRNA (guanine-N(7)-)-me 99.4 7.5E-13 2.6E-17 125.4 10.3 113 74-187 45-170 (235)
169 2ld4_A Anamorsin; methyltransf 99.4 1.6E-12 5.4E-17 117.5 11.9 121 73-236 10-130 (176)
170 3e05_A Precorrin-6Y C5,15-meth 99.4 2.6E-12 8.9E-17 119.1 13.6 124 373-520 37-161 (204)
171 3jwh_A HEN1; methyltransferase 99.4 3.3E-12 1.1E-16 119.7 14.4 134 375-524 28-189 (217)
172 1vbf_A 231AA long hypothetical 99.4 1.8E-12 6.3E-17 122.7 12.7 109 65-188 60-168 (231)
173 3mb5_A SAM-dependent methyltra 99.4 1.6E-12 5.4E-17 125.1 12.2 133 66-240 84-221 (255)
174 3grz_A L11 mtase, ribosomal pr 99.4 2.4E-12 8.3E-17 119.4 13.0 141 357-525 43-183 (205)
175 2pjd_A Ribosomal RNA small sub 99.4 4.5E-13 1.5E-17 134.7 8.4 117 65-187 186-305 (343)
176 3kr9_A SAM-dependent methyltra 99.4 4E-12 1.4E-16 118.0 14.1 127 74-241 14-143 (225)
177 2fk8_A Methoxy mycolic acid sy 99.4 5E-12 1.7E-16 125.9 15.8 144 360-525 74-252 (318)
178 3bkw_A MLL3908 protein, S-aden 99.4 2.6E-12 8.9E-17 122.5 12.9 130 375-527 42-214 (243)
179 3lec_A NADB-rossmann superfami 99.4 4.7E-12 1.6E-16 117.7 13.9 128 74-241 20-149 (230)
180 3h2b_A SAM-dependent methyltra 99.4 5E-12 1.7E-16 117.1 14.2 125 377-527 42-182 (203)
181 3p9n_A Possible methyltransfer 99.4 8.9E-13 3E-17 120.7 9.0 111 375-504 43-157 (189)
182 3hp7_A Hemolysin, putative; st 99.4 1.4E-12 4.9E-17 125.8 10.7 148 74-241 84-232 (291)
183 2pwy_A TRNA (adenine-N(1)-)-me 99.4 2.9E-12 1E-16 123.4 12.9 133 67-240 88-223 (258)
184 4gek_A TRNA (CMO5U34)-methyltr 99.4 7.3E-12 2.5E-16 120.4 15.2 107 375-502 69-180 (261)
185 3l8d_A Methyltransferase; stru 99.4 4.5E-12 1.5E-16 120.8 13.5 138 364-527 43-200 (242)
186 3njr_A Precorrin-6Y methylase; 99.4 1.1E-11 3.7E-16 114.9 15.4 127 373-525 52-178 (204)
187 2frn_A Hypothetical protein PH 99.4 6.6E-12 2.3E-16 122.2 14.2 129 74-238 124-254 (278)
188 1u2z_A Histone-lysine N-methyl 99.4 1.6E-12 5.3E-17 132.7 10.0 120 64-186 231-360 (433)
189 2ift_A Putative methylase HI07 99.4 1.4E-12 4.7E-17 120.7 8.8 108 75-188 53-166 (201)
190 1ws6_A Methyltransferase; stru 99.4 3.2E-13 1.1E-17 121.3 4.4 109 75-189 41-151 (171)
191 3sso_A Methyltransferase; macr 99.4 1.6E-12 5.3E-17 129.4 9.6 103 74-187 215-326 (419)
192 2yxe_A Protein-L-isoaspartate 99.4 3.2E-12 1.1E-16 119.6 11.3 112 65-188 67-180 (215)
193 2nxc_A L11 mtase, ribosomal pr 99.3 3.7E-12 1.3E-16 122.3 11.9 140 357-525 103-242 (254)
194 3e23_A Uncharacterized protein 99.3 4.9E-12 1.7E-16 117.9 12.1 125 375-527 42-182 (211)
195 1ej0_A FTSJ; methyltransferase 99.3 5E-12 1.7E-16 114.0 11.7 106 73-188 20-139 (180)
196 3dr5_A Putative O-methyltransf 99.3 2.7E-12 9.3E-17 120.3 10.1 104 75-185 56-163 (221)
197 2ozv_A Hypothetical protein AT 99.3 5.8E-12 2E-16 121.4 12.7 150 359-528 23-195 (260)
198 3gnl_A Uncharacterized protein 99.3 8E-12 2.7E-16 117.1 13.1 127 74-241 20-149 (244)
199 3ntv_A MW1564 protein; rossman 99.3 2E-12 6.7E-17 122.5 9.0 110 70-187 66-178 (232)
200 3opn_A Putative hemolysin; str 99.3 1.9E-12 6.5E-17 122.1 8.8 145 74-241 36-184 (232)
201 2fyt_A Protein arginine N-meth 99.3 4.3E-12 1.5E-16 127.1 11.8 109 66-182 55-168 (340)
202 3lcc_A Putative methyl chlorid 99.3 1.4E-11 4.6E-16 117.0 14.8 142 363-527 55-207 (235)
203 3dtn_A Putative methyltransfer 99.3 1.5E-11 5.3E-16 116.5 15.1 129 374-525 42-212 (234)
204 2ipx_A RRNA 2'-O-methyltransfe 99.3 3.2E-12 1.1E-16 121.2 10.2 109 71-185 73-182 (233)
205 3bzb_A Uncharacterized protein 99.3 5.6E-12 1.9E-16 122.9 12.1 138 74-239 78-235 (281)
206 2yxd_A Probable cobalt-precorr 99.3 1E-11 3.5E-16 112.7 13.0 134 363-525 22-155 (183)
207 3i9f_A Putative type 11 methyl 99.3 5.2E-12 1.8E-16 113.4 10.8 122 375-527 16-148 (170)
208 2a14_A Indolethylamine N-methy 99.3 1.1E-12 3.7E-17 126.8 6.7 142 374-527 53-238 (263)
209 3g89_A Ribosomal RNA small sub 99.3 7.1E-12 2.4E-16 119.7 12.2 158 374-552 78-237 (249)
210 2esr_A Methyltransferase; stru 99.3 2.9E-12 9.8E-17 115.9 9.0 117 65-188 20-141 (177)
211 1o54_A SAM-dependent O-methylt 99.3 4.5E-12 1.5E-16 123.5 11.1 129 69-239 106-237 (277)
212 3mti_A RRNA methylase; SAM-dep 99.3 1.3E-11 4.4E-16 112.5 13.5 141 363-525 10-167 (185)
213 3q7e_A Protein arginine N-meth 99.3 2.7E-12 9.1E-17 129.2 9.7 104 74-183 65-171 (349)
214 1dl5_A Protein-L-isoaspartate 99.3 4.5E-12 1.5E-16 126.0 11.2 113 63-187 63-177 (317)
215 1ixk_A Methyltransferase; open 99.3 1.2E-11 4.2E-16 122.4 14.3 139 69-238 112-272 (315)
216 2fhp_A Methylase, putative; al 99.3 1.8E-12 6.1E-17 118.3 7.7 111 74-188 43-157 (187)
217 3hnr_A Probable methyltransfer 99.3 1.2E-11 4.3E-16 115.9 13.5 124 376-525 45-199 (220)
218 3dli_A Methyltransferase; PSI- 99.3 1.2E-11 4.1E-16 117.7 13.4 127 374-527 39-184 (240)
219 1o9g_A RRNA methyltransferase; 99.3 3.2E-12 1.1E-16 122.5 9.4 114 74-187 50-216 (250)
220 2p7i_A Hypothetical protein; p 99.3 6.7E-12 2.3E-16 120.0 11.7 126 375-526 41-198 (250)
221 3kr9_A SAM-dependent methyltra 99.3 7.4E-12 2.5E-16 116.2 11.4 125 376-525 15-141 (225)
222 1p91_A Ribosomal RNA large sub 99.3 1.8E-11 6.2E-16 118.6 14.8 101 74-191 84-184 (269)
223 2plw_A Ribosomal RNA methyltra 99.3 4.2E-11 1.4E-15 110.6 16.5 104 74-187 21-156 (201)
224 2y1w_A Histone-arginine methyl 99.3 4.3E-12 1.5E-16 127.7 10.4 113 65-184 40-154 (348)
225 4hc4_A Protein arginine N-meth 99.3 3.6E-12 1.2E-16 127.9 9.8 106 368-486 75-183 (376)
226 3bkx_A SAM-dependent methyltra 99.3 3.3E-11 1.1E-15 117.2 16.2 138 373-527 40-219 (275)
227 3hm2_A Precorrin-6Y C5,15-meth 99.3 1.4E-11 4.9E-16 111.3 12.5 129 373-525 22-151 (178)
228 2i62_A Nicotinamide N-methyltr 99.3 9.7E-12 3.3E-16 120.2 12.1 142 374-527 54-239 (265)
229 2yqz_A Hypothetical protein TT 99.3 2E-11 6.8E-16 117.8 14.1 117 363-501 25-142 (263)
230 1ve3_A Hypothetical protein PH 99.3 1.9E-11 6.4E-16 115.2 13.6 117 361-501 25-143 (227)
231 1yzh_A TRNA (guanine-N(7)-)-me 99.3 3.8E-11 1.3E-15 112.1 15.4 131 376-525 41-180 (214)
232 1ri5_A MRNA capping enzyme; me 99.3 1E-11 3.5E-16 122.2 12.1 108 375-501 63-175 (298)
233 3cgg_A SAM-dependent methyltra 99.3 3.7E-11 1.3E-15 110.1 15.1 126 376-527 46-175 (195)
234 2xvm_A Tellurite resistance pr 99.3 2.2E-11 7.6E-16 112.1 13.5 127 375-525 31-171 (199)
235 3thr_A Glycine N-methyltransfe 99.3 1E-11 3.5E-16 122.0 11.9 105 376-486 57-169 (293)
236 2bm8_A Cephalosporin hydroxyla 99.3 2.7E-12 9.2E-17 121.7 7.4 103 74-186 80-188 (236)
237 1xdz_A Methyltransferase GIDB; 99.3 7.5E-12 2.6E-16 119.2 10.5 135 375-530 69-205 (240)
238 1l3i_A Precorrin-6Y methyltran 99.3 8E-12 2.8E-16 114.2 10.3 136 364-524 21-157 (192)
239 2h00_A Methyltransferase 10 do 99.3 1.1E-12 3.9E-17 126.1 4.7 156 75-241 65-238 (254)
240 4fsd_A Arsenic methyltransfera 99.3 2E-11 6.9E-16 124.5 14.3 140 374-525 81-249 (383)
241 3lec_A NADB-rossmann superfami 99.3 1.3E-11 4.5E-16 114.7 11.7 125 376-525 21-147 (230)
242 3g07_A 7SK snRNA methylphospha 99.3 7.4E-12 2.5E-16 122.9 10.6 143 374-527 44-269 (292)
243 3r0q_C Probable protein argini 99.3 6.9E-12 2.4E-16 127.4 10.6 109 69-184 57-168 (376)
244 1wy7_A Hypothetical protein PH 99.3 5E-11 1.7E-15 110.7 15.6 128 73-240 47-174 (207)
245 3tr6_A O-methyltransferase; ce 99.3 8.5E-12 2.9E-16 117.5 10.4 110 74-188 63-177 (225)
246 1jg1_A PIMT;, protein-L-isoasp 99.3 1E-11 3.6E-16 117.8 11.0 112 63-188 79-192 (235)
247 3adn_A Spermidine synthase; am 99.3 3.6E-11 1.2E-15 117.4 15.1 109 74-185 82-198 (294)
248 3tfw_A Putative O-methyltransf 99.3 1.2E-11 4E-16 118.4 11.3 109 73-187 61-172 (248)
249 3duw_A OMT, O-methyltransferas 99.3 7E-12 2.4E-16 118.0 9.6 111 72-187 55-169 (223)
250 1i1n_A Protein-L-isoaspartate 99.3 1.4E-11 4.7E-16 116.2 11.6 103 73-187 75-184 (226)
251 3gdh_A Trimethylguanosine synt 99.3 2.8E-13 9.4E-18 129.3 -0.2 101 74-183 77-179 (241)
252 3gjy_A Spermidine synthase; AP 99.3 8.9E-12 3.1E-16 121.6 10.4 109 76-186 90-201 (317)
253 3e8s_A Putative SAM dependent 99.3 2.4E-11 8.1E-16 114.4 12.9 129 376-528 52-210 (227)
254 1y8c_A S-adenosylmethionine-de 99.3 4.7E-11 1.6E-15 113.8 15.1 96 376-486 37-136 (246)
255 2vdv_E TRNA (guanine-N(7)-)-me 99.3 1.7E-11 5.9E-16 117.1 12.0 111 74-185 48-173 (246)
256 2frn_A Hypothetical protein PH 99.3 2.7E-11 9.1E-16 117.9 13.5 125 376-524 125-254 (278)
257 3gu3_A Methyltransferase; alph 99.3 5.8E-11 2E-15 116.1 15.9 110 371-502 17-128 (284)
258 2gpy_A O-methyltransferase; st 99.3 5.5E-12 1.9E-16 119.6 8.3 116 66-187 45-162 (233)
259 3ocj_A Putative exported prote 99.3 1.3E-11 4.6E-16 121.9 11.3 132 375-526 117-290 (305)
260 3gnl_A Uncharacterized protein 99.3 1.9E-11 6.7E-16 114.5 11.4 124 376-524 21-146 (244)
261 4azs_A Methyltransferase WBDD; 99.3 1.6E-12 5.6E-17 139.4 4.7 111 74-188 65-176 (569)
262 2igt_A SAM dependent methyltra 99.3 2.5E-11 8.4E-16 120.8 12.6 110 74-187 152-274 (332)
263 1ne2_A Hypothetical protein TA 99.3 9.3E-11 3.2E-15 108.2 15.7 91 73-175 49-139 (200)
264 3eey_A Putative rRNA methylase 99.3 1.4E-11 4.8E-16 113.5 10.1 152 375-544 21-190 (197)
265 2pbf_A Protein-L-isoaspartate 99.3 1.1E-11 3.9E-16 116.8 9.7 107 73-187 78-195 (227)
266 3pfg_A N-methyltransferase; N, 99.3 3E-11 1E-15 116.7 12.8 103 363-486 39-145 (263)
267 2kw5_A SLR1183 protein; struct 99.3 2.9E-11 9.9E-16 111.8 12.1 127 376-527 30-171 (202)
268 3d2l_A SAM-dependent methyltra 99.3 7.5E-11 2.6E-15 112.3 15.4 95 376-486 33-131 (243)
269 3ou2_A SAM-dependent methyltra 99.3 5.1E-11 1.7E-15 111.4 13.9 126 374-525 44-203 (218)
270 2b25_A Hypothetical protein; s 99.3 2.8E-11 9.7E-16 121.3 12.8 112 67-187 97-221 (336)
271 3ccf_A Cyclopropane-fatty-acyl 99.3 1.7E-11 6E-16 119.5 11.0 126 375-527 56-210 (279)
272 3ege_A Putative methyltransfer 99.3 1.8E-11 6.3E-16 118.1 10.9 140 364-532 22-183 (261)
273 1i9g_A Hypothetical protein RV 99.3 1.6E-11 5.6E-16 119.7 10.7 111 66-187 90-205 (280)
274 2fhp_A Methylase, putative; al 99.2 6.9E-12 2.4E-16 114.3 7.0 128 361-504 28-158 (187)
275 2fpo_A Methylase YHHF; structu 99.2 1E-11 3.4E-16 114.9 8.1 105 75-186 54-161 (202)
276 1r18_A Protein-L-isoaspartate( 99.2 1.6E-11 5.4E-16 115.9 9.5 110 65-187 72-196 (227)
277 2p35_A Trans-aconitate 2-methy 99.2 4.7E-11 1.6E-15 114.9 12.8 109 367-501 24-133 (259)
278 2ift_A Putative methylase HI07 99.2 1.4E-11 4.6E-16 113.9 8.3 112 376-504 53-167 (201)
279 3fzg_A 16S rRNA methylase; met 99.2 1.2E-11 4E-16 110.0 7.4 105 376-503 49-154 (200)
280 2esr_A Methyltransferase; stru 99.2 6.6E-12 2.2E-16 113.5 6.0 112 374-504 29-142 (177)
281 2b3t_A Protein methyltransfera 99.2 2E-11 6.9E-16 118.8 9.9 143 359-525 93-261 (276)
282 1g6q_1 HnRNP arginine N-methyl 99.2 1.7E-11 5.7E-16 122.3 9.5 104 74-183 37-143 (328)
283 2igt_A SAM dependent methyltra 99.2 1.9E-10 6.4E-15 114.4 17.0 170 327-522 111-299 (332)
284 2fyt_A Protein arginine N-meth 99.2 4E-11 1.4E-15 120.1 12.1 111 364-486 52-165 (340)
285 1pjz_A Thiopurine S-methyltran 99.2 2.1E-11 7.3E-16 112.8 9.3 148 363-529 10-178 (203)
286 4df3_A Fibrillarin-like rRNA/T 99.2 1.4E-10 4.9E-15 108.1 14.9 154 353-527 50-217 (233)
287 4hg2_A Methyltransferase type 99.2 2E-11 6.9E-16 116.9 9.4 101 364-486 29-129 (257)
288 1sui_A Caffeoyl-COA O-methyltr 99.2 2E-11 7E-16 116.5 9.4 108 72-186 76-191 (247)
289 2p8j_A S-adenosylmethionine-de 99.2 1.1E-11 3.9E-16 115.1 7.5 107 375-502 22-130 (209)
290 3q7e_A Protein arginine N-meth 99.2 3.8E-11 1.3E-15 120.7 11.8 110 365-486 55-167 (349)
291 3ofk_A Nodulation protein S; N 99.2 2.6E-11 8.8E-16 113.4 9.9 121 358-502 33-156 (216)
292 3b3j_A Histone-arginine methyl 99.2 1.4E-11 4.9E-16 128.5 8.9 108 69-183 152-261 (480)
293 2i7c_A Spermidine synthase; tr 99.2 1.4E-10 4.7E-15 113.0 15.3 109 74-185 77-192 (283)
294 3tma_A Methyltransferase; thum 99.2 6E-11 2E-15 119.8 13.1 116 67-186 195-318 (354)
295 3cc8_A Putative methyltransfer 99.2 5.6E-11 1.9E-15 112.0 12.2 129 375-529 31-187 (230)
296 2fpo_A Methylase YHHF; structu 99.2 2.8E-11 9.7E-16 111.9 9.7 109 376-504 54-164 (202)
297 1fbn_A MJ fibrillarin homologu 99.2 2.1E-10 7E-15 108.4 15.8 138 369-527 67-213 (230)
298 1yb2_A Hypothetical protein TA 99.2 8E-11 2.8E-15 114.4 13.3 134 367-527 101-237 (275)
299 3r3h_A O-methyltransferase, SA 99.2 4.6E-12 1.6E-16 120.6 4.3 108 73-187 58-172 (242)
300 3orh_A Guanidinoacetate N-meth 99.2 2.6E-12 8.9E-17 121.9 2.4 145 355-524 42-207 (236)
301 1xj5_A Spermidine synthase 1; 99.2 2E-11 6.9E-16 121.2 8.8 109 74-184 119-234 (334)
302 3mb5_A SAM-dependent methyltra 99.2 4.7E-11 1.6E-15 114.7 10.9 136 367-528 84-223 (255)
303 3c3p_A Methyltransferase; NP_9 99.2 2.2E-11 7.5E-16 113.4 8.3 105 74-187 55-162 (210)
304 2pt6_A Spermidine synthase; tr 99.2 1.8E-10 6.3E-15 114.0 15.4 109 74-185 115-230 (321)
305 2hnk_A SAM-dependent O-methylt 99.2 6.1E-11 2.1E-15 112.8 11.4 115 68-187 53-183 (239)
306 3g5t_A Trans-aconitate 3-methy 99.2 1.2E-10 4.1E-15 114.7 13.9 105 376-486 36-143 (299)
307 1iy9_A Spermidine synthase; ro 99.2 1.6E-10 5.3E-15 112.1 14.3 109 74-185 74-189 (275)
308 3lcv_B Sisomicin-gentamicin re 99.2 2.9E-11 9.7E-16 112.5 8.5 141 74-240 131-271 (281)
309 2g72_A Phenylethanolamine N-me 99.2 2.3E-11 7.9E-16 119.2 8.4 143 375-527 70-256 (289)
310 3a27_A TYW2, uncharacterized p 99.2 4.9E-11 1.7E-15 115.5 10.6 105 73-188 117-222 (272)
311 3cbg_A O-methyltransferase; cy 99.2 2.1E-11 7.2E-16 115.4 7.8 109 74-187 71-184 (232)
312 3g2m_A PCZA361.24; SAM-depende 99.2 9.8E-11 3.3E-15 115.4 12.8 136 376-530 82-277 (299)
313 1nv8_A HEMK protein; class I a 99.2 4.4E-11 1.5E-15 116.5 10.1 103 74-184 122-248 (284)
314 3m33_A Uncharacterized protein 99.2 9.1E-11 3.1E-15 110.5 11.6 117 376-525 48-165 (226)
315 3q87_B N6 adenine specific DNA 99.2 2.1E-10 7.1E-15 102.9 13.4 133 358-526 7-148 (170)
316 1zx0_A Guanidinoacetate N-meth 99.2 1.3E-11 4.5E-16 117.2 5.8 127 376-521 60-204 (236)
317 3r0q_C Probable protein argini 99.2 7.6E-11 2.6E-15 119.7 11.8 111 363-486 50-163 (376)
318 2oxt_A Nucleoside-2'-O-methylt 99.2 1.5E-11 5.2E-16 118.2 6.2 103 74-187 73-187 (265)
319 3tm4_A TRNA (guanine N2-)-meth 99.2 3.8E-10 1.3E-14 114.5 16.6 132 73-243 215-354 (373)
320 2fca_A TRNA (guanine-N(7)-)-me 99.2 2.4E-10 8.3E-15 106.5 14.0 130 376-525 38-177 (213)
321 3ajd_A Putative methyltransfer 99.2 4.1E-11 1.4E-15 116.4 8.7 120 69-188 77-214 (274)
322 2yxl_A PH0851 protein, 450AA l 99.2 3E-10 1E-14 118.1 15.7 118 69-188 253-392 (450)
323 2ipx_A RRNA 2'-O-methyltransfe 99.2 2E-10 6.8E-15 108.7 13.1 136 371-527 72-217 (233)
324 2qm3_A Predicted methyltransfe 99.2 3.1E-10 1.1E-14 115.2 15.4 104 74-184 171-277 (373)
325 2avd_A Catechol-O-methyltransf 99.2 4.6E-11 1.6E-15 112.8 8.6 110 73-187 67-181 (229)
326 1vlm_A SAM-dependent methyltra 99.2 1.4E-10 4.9E-15 108.6 11.9 119 377-527 48-188 (219)
327 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.1E-10 3.7E-15 112.4 11.3 135 367-527 87-224 (258)
328 2b2c_A Spermidine synthase; be 99.2 3E-11 1E-15 119.0 7.5 109 74-185 107-222 (314)
329 2wa2_A Non-structural protein 99.2 2.7E-11 9.2E-16 117.1 7.0 103 74-187 81-195 (276)
330 3m70_A Tellurite resistance pr 99.2 1.6E-10 5.5E-15 113.0 12.6 125 376-525 120-258 (286)
331 1o54_A SAM-dependent O-methylt 99.2 1.5E-10 5.1E-15 112.7 12.0 134 368-527 104-239 (277)
332 1qzz_A RDMB, aclacinomycin-10- 99.2 3.2E-10 1.1E-14 115.5 15.0 133 373-527 179-339 (374)
333 2vdw_A Vaccinia virus capping 99.2 1.6E-10 5.5E-15 113.5 12.3 137 357-502 28-171 (302)
334 3k6r_A Putative transferase PH 99.2 1.7E-10 5.7E-15 110.9 12.1 126 376-525 125-255 (278)
335 3c3y_A Pfomt, O-methyltransfer 99.2 8.5E-11 2.9E-15 111.5 10.0 110 72-186 67-182 (237)
336 3i53_A O-methyltransferase; CO 99.2 6.2E-10 2.1E-14 111.3 16.8 133 373-527 166-321 (332)
337 2aot_A HMT, histamine N-methyl 99.2 2.8E-10 9.6E-15 111.7 14.0 133 375-524 51-218 (292)
338 2gb4_A Thiopurine S-methyltran 99.2 1.9E-10 6.5E-15 109.9 12.3 147 363-527 55-227 (252)
339 1uir_A Polyamine aminopropyltr 99.2 5E-11 1.7E-15 117.9 8.5 109 74-185 76-195 (314)
340 2o07_A Spermidine synthase; st 99.2 4.2E-11 1.4E-15 117.7 7.9 109 74-185 94-209 (304)
341 2p41_A Type II methyltransfera 99.1 6.1E-11 2.1E-15 116.4 8.7 151 28-188 17-194 (305)
342 2b78_A Hypothetical protein SM 99.1 5.1E-10 1.7E-14 113.9 15.8 135 375-525 211-360 (385)
343 3bxo_A N,N-dimethyltransferase 99.1 1.8E-10 6.1E-15 109.3 11.6 104 363-487 29-136 (239)
344 1mjf_A Spermidine synthase; sp 99.1 5E-11 1.7E-15 116.0 7.8 107 74-185 74-193 (281)
345 3dxy_A TRNA (guanine-N(7)-)-me 99.1 4E-10 1.4E-14 105.3 13.7 127 376-521 34-171 (218)
346 2gs9_A Hypothetical protein TT 99.1 3E-10 1E-14 105.6 12.9 99 376-502 36-134 (211)
347 1g6q_1 HnRNP arginine N-methyl 99.1 1.2E-10 4.1E-15 116.1 10.6 102 373-486 35-139 (328)
348 3gwz_A MMCR; methyltransferase 99.1 7.4E-10 2.5E-14 112.4 16.7 138 367-526 193-355 (369)
349 3c0k_A UPF0064 protein YCCW; P 99.1 6.5E-10 2.2E-14 113.8 16.3 133 376-525 220-368 (396)
350 3iv6_A Putative Zn-dependent a 99.1 4.4E-10 1.5E-14 107.2 13.8 117 365-504 34-152 (261)
351 4dmg_A Putative uncharacterize 99.1 5.3E-10 1.8E-14 113.5 15.3 167 328-525 176-355 (393)
352 2r3s_A Uncharacterized protein 99.1 3.6E-10 1.2E-14 113.2 14.0 132 375-527 164-323 (335)
353 3frh_A 16S rRNA methylase; met 99.1 9.7E-11 3.3E-15 108.0 8.7 102 74-184 104-205 (253)
354 4dzr_A Protein-(glutamine-N5) 99.1 9.1E-12 3.1E-16 116.2 1.9 144 361-525 14-190 (215)
355 1sqg_A SUN protein, FMU protei 99.1 5.6E-10 1.9E-14 115.5 15.5 118 69-188 240-377 (429)
356 3fpf_A Mtnas, putative unchara 99.1 3E-10 1E-14 109.3 12.5 128 372-525 118-248 (298)
357 1inl_A Spermidine synthase; be 99.1 4.3E-10 1.5E-14 110.2 13.9 109 74-185 89-205 (296)
358 2yvl_A TRMI protein, hypotheti 99.1 2E-10 7E-15 109.7 11.2 107 68-187 84-192 (248)
359 3ggd_A SAM-dependent methyltra 99.1 5.8E-10 2E-14 106.3 14.4 124 357-501 39-164 (245)
360 3hp7_A Hemolysin, putative; st 99.1 2.1E-10 7.2E-15 110.7 11.2 147 357-527 66-232 (291)
361 4e2x_A TCAB9; kijanose, tetron 99.1 2.7E-10 9.2E-15 117.7 12.6 144 361-527 92-253 (416)
362 1x19_A CRTF-related protein; m 99.1 1E-09 3.5E-14 110.9 16.5 133 373-527 187-348 (359)
363 1wy7_A Hypothetical protein PH 99.1 9.7E-10 3.3E-14 101.9 14.8 124 374-525 47-173 (207)
364 2nyu_A Putative ribosomal RNA 99.1 2.2E-10 7.5E-15 105.2 10.1 104 74-187 21-147 (196)
365 3m6w_A RRNA methylase; rRNA me 99.1 2.5E-10 8.7E-15 117.6 11.5 117 69-188 95-232 (464)
366 3c0k_A UPF0064 protein YCCW; P 99.1 8.5E-10 2.9E-14 112.9 15.2 111 74-187 219-341 (396)
367 4hc4_A Protein arginine N-meth 99.1 1.4E-10 4.6E-15 116.4 9.0 103 74-183 82-187 (376)
368 4dmg_A Putative uncharacterize 99.1 1.6E-09 5.6E-14 109.9 16.6 109 74-187 213-328 (393)
369 2b78_A Hypothetical protein SM 99.1 3.5E-10 1.2E-14 115.1 11.7 113 74-187 211-333 (385)
370 1tw3_A COMT, carminomycin 4-O- 99.1 7.2E-10 2.5E-14 112.2 14.0 132 374-527 181-339 (360)
371 3dou_A Ribosomal RNA large sub 99.1 1.5E-10 5.2E-15 105.8 8.0 102 74-187 24-141 (191)
372 2ip2_A Probable phenazine-spec 99.1 6.8E-10 2.3E-14 111.2 13.5 128 378-527 169-322 (334)
373 1jsx_A Glucose-inhibited divis 99.1 7.9E-11 2.7E-15 109.2 6.1 121 376-525 65-186 (207)
374 3opn_A Putative hemolysin; str 99.1 6.4E-11 2.2E-15 111.6 5.4 146 358-527 19-184 (232)
375 3lbf_A Protein-L-isoaspartate 99.1 4.3E-10 1.5E-14 104.5 10.6 111 365-502 66-176 (210)
376 1zq9_A Probable dimethyladenos 99.1 1.9E-10 6.6E-15 112.1 8.4 89 63-159 16-106 (285)
377 1nt2_A Fibrillarin-like PRE-rR 99.1 2.2E-09 7.5E-14 99.6 15.2 132 374-527 55-195 (210)
378 1wzn_A SAM-dependent methyltra 99.1 8.6E-10 2.9E-14 105.6 12.7 97 375-486 40-139 (252)
379 1ws6_A Methyltransferase; stru 99.1 2.5E-10 8.6E-15 102.2 8.2 109 376-504 41-151 (171)
380 3k6r_A Putative transferase PH 99.1 7.1E-10 2.4E-14 106.6 11.7 130 74-239 124-255 (278)
381 1ej0_A FTSJ; methyltransferase 99.1 9.3E-10 3.2E-14 98.9 11.9 141 359-525 5-159 (180)
382 2y1w_A Histone-arginine methyl 99.1 4.9E-10 1.7E-14 112.6 11.0 109 365-486 39-149 (348)
383 3dp7_A SAM-dependent methyltra 99.1 1.1E-09 3.9E-14 110.7 13.6 133 376-527 179-342 (363)
384 2yvl_A TRMI protein, hypotheti 99.1 1.1E-09 3.8E-14 104.6 12.8 132 367-525 82-213 (248)
385 3mcz_A O-methyltransferase; ad 99.1 1.4E-09 4.8E-14 109.7 14.2 136 370-524 172-336 (352)
386 2pxx_A Uncharacterized protein 99.1 3.5E-10 1.2E-14 105.4 9.0 117 363-503 31-162 (215)
387 3id6_C Fibrillarin-like rRNA/T 99.0 4.4E-09 1.5E-13 98.4 16.0 152 355-527 51-216 (232)
388 2pjd_A Ribosomal RNA small sub 99.0 2.9E-10 9.8E-15 114.1 8.5 104 376-502 196-305 (343)
389 2yx1_A Hypothetical protein MJ 99.0 7.7E-10 2.6E-14 110.5 11.6 119 376-524 195-314 (336)
390 1wxx_A TT1595, hypothetical pr 99.0 2.6E-09 8.9E-14 108.7 15.7 130 376-525 209-354 (382)
391 3tma_A Methyltransferase; thum 99.0 2E-09 6.7E-14 108.6 14.6 138 362-525 189-337 (354)
392 3bwc_A Spermidine synthase; SA 99.0 1.1E-09 3.8E-14 107.7 12.5 143 376-532 95-245 (304)
393 1wxx_A TT1595, hypothetical pr 99.0 1.9E-09 6.5E-14 109.8 14.4 111 75-187 209-327 (382)
394 1i9g_A Hypothetical protein RV 99.0 9.3E-10 3.2E-14 107.2 11.6 131 372-527 95-230 (280)
395 3tm4_A TRNA (guanine N2-)-meth 99.0 3.1E-09 1.1E-13 107.7 15.5 126 374-525 215-350 (373)
396 1nv8_A HEMK protein; class I a 99.0 4.6E-10 1.6E-14 109.2 9.1 121 359-501 106-250 (284)
397 3mq2_A 16S rRNA methyltransfer 99.0 8.4E-10 2.9E-14 103.2 10.6 131 375-525 26-182 (218)
398 2f8l_A Hypothetical protein LM 99.0 6.7E-10 2.3E-14 111.5 10.4 111 72-187 127-258 (344)
399 2zfu_A Nucleomethylin, cerebra 99.0 7.6E-10 2.6E-14 103.2 10.1 111 375-525 66-177 (215)
400 4a6d_A Hydroxyindole O-methylt 99.0 4.7E-09 1.6E-13 105.7 16.5 140 366-528 169-335 (353)
401 2h00_A Methyltransferase 10 do 99.0 7E-09 2.4E-13 99.4 16.7 141 376-525 65-236 (254)
402 3duw_A OMT, O-methyltransferas 99.0 8.5E-10 2.9E-14 103.6 9.9 111 375-502 57-169 (223)
403 3u81_A Catechol O-methyltransf 99.0 1.1E-09 3.8E-14 102.6 10.4 124 376-518 58-187 (221)
404 3m4x_A NOL1/NOP2/SUN family pr 99.0 9.4E-10 3.2E-14 113.2 10.5 140 69-238 99-260 (456)
405 2as0_A Hypothetical protein PH 99.0 1.5E-09 5.1E-14 111.2 12.0 134 376-525 217-364 (396)
406 2frx_A Hypothetical protein YE 99.0 2.7E-09 9.4E-14 111.0 13.9 116 70-188 110-249 (479)
407 2xyq_A Putative 2'-O-methyl tr 99.0 1.9E-09 6.3E-14 104.3 11.7 118 73-239 61-195 (290)
408 1g8a_A Fibrillarin-like PRE-rR 99.0 6.9E-09 2.4E-13 97.6 15.4 142 364-527 58-212 (227)
409 2cmg_A Spermidine synthase; tr 99.0 3.9E-10 1.3E-14 108.2 6.8 95 74-184 71-170 (262)
410 1ixk_A Methyltransferase; open 99.0 2.2E-09 7.5E-14 106.1 12.4 141 360-524 106-272 (315)
411 3adn_A Spermidine synthase; am 99.0 1.2E-09 4E-14 106.6 10.1 141 376-532 83-232 (294)
412 3a27_A TYW2, uncharacterized p 99.0 1.9E-09 6.5E-14 104.3 11.5 105 374-503 117-222 (272)
413 1o9g_A RRNA methyltransferase; 99.0 7.8E-10 2.7E-14 105.8 8.7 126 364-501 39-215 (250)
414 2avn_A Ubiquinone/menaquinone 99.0 1E-09 3.6E-14 105.6 9.6 111 364-503 44-155 (260)
415 3dr5_A Putative O-methyltransf 99.0 3.1E-09 1.1E-13 99.4 12.5 100 376-486 56-157 (221)
416 2as0_A Hypothetical protein PH 99.0 9.5E-10 3.3E-14 112.6 9.8 113 74-187 216-337 (396)
417 3dou_A Ribosomal RNA large sub 99.0 1.1E-09 3.8E-14 99.9 9.2 141 359-527 8-164 (191)
418 3b3j_A Histone-arginine methyl 99.0 4.6E-10 1.6E-14 117.1 7.3 111 363-486 145-257 (480)
419 3ntv_A MW1564 protein; rossman 99.0 1.2E-09 4.2E-14 103.1 9.6 100 375-486 70-170 (232)
420 2yxe_A Protein-L-isoaspartate 99.0 1.5E-09 5E-14 101.3 9.8 111 367-503 68-180 (215)
421 2qm3_A Predicted methyltransfe 99.0 3.7E-09 1.3E-13 107.3 13.5 131 375-525 171-307 (373)
422 1uwv_A 23S rRNA (uracil-5-)-me 99.0 4E-09 1.4E-13 109.1 13.5 109 68-184 279-388 (433)
423 3b5i_A S-adenosyl-L-methionine 99.0 5.3E-09 1.8E-13 104.6 13.6 169 75-244 52-301 (374)
424 1vbf_A 231AA long hypothetical 99.0 2.3E-09 7.8E-14 101.2 10.4 110 365-503 59-168 (231)
425 3gdh_A Trimethylguanosine synt 99.0 1.4E-10 5E-15 110.3 2.1 98 376-486 78-175 (241)
426 3tfw_A Putative O-methyltransf 98.9 1.9E-09 6.5E-14 102.9 9.7 108 375-502 62-172 (248)
427 3lcv_B Sisomicin-gentamicin re 98.9 2.4E-09 8.2E-14 99.7 9.7 126 376-525 132-270 (281)
428 1uwv_A 23S rRNA (uracil-5-)-me 98.9 5.3E-09 1.8E-13 108.2 13.4 143 360-525 270-412 (433)
429 1dl5_A Protein-L-isoaspartate 98.9 3.2E-09 1.1E-13 105.3 10.9 111 365-501 64-176 (317)
430 3bgv_A MRNA CAP guanine-N7 met 98.9 2.1E-09 7.2E-14 106.5 9.5 116 376-501 34-156 (313)
431 2vdv_E TRNA (guanine-N(7)-)-me 98.9 8.5E-09 2.9E-13 98.3 13.1 127 375-519 48-191 (246)
432 2yx1_A Hypothetical protein MJ 98.9 3.4E-09 1.2E-13 105.8 10.7 98 74-187 194-293 (336)
433 3p2e_A 16S rRNA methylase; met 98.9 2.3E-09 8E-14 100.6 8.8 130 376-527 24-185 (225)
434 1iy9_A Spermidine synthase; ro 98.9 5.7E-09 2E-13 101.0 11.7 137 376-531 75-222 (275)
435 3lst_A CALO1 methyltransferase 98.9 4.1E-09 1.4E-13 106.0 11.0 129 373-526 181-335 (348)
436 2b25_A Hypothetical protein; s 98.9 5E-09 1.7E-13 104.9 11.5 133 373-525 102-245 (336)
437 3ckk_A TRNA (guanine-N(7)-)-me 98.9 8.7E-09 3E-13 97.3 12.4 129 376-518 46-185 (235)
438 3htx_A HEN1; HEN1, small RNA m 98.9 6.9E-09 2.4E-13 111.3 12.6 111 375-502 720-836 (950)
439 2gpy_A O-methyltransferase; st 98.9 3.2E-09 1.1E-13 100.4 9.1 104 376-499 54-159 (233)
440 3uwp_A Histone-lysine N-methyl 98.9 2.9E-09 9.8E-14 106.3 9.0 110 373-499 170-287 (438)
441 1u2z_A Histone-lysine N-methyl 98.9 4.1E-09 1.4E-13 107.5 10.4 112 372-499 238-358 (433)
442 3ajd_A Putative methyltransfer 98.9 1.2E-08 4.2E-13 98.8 13.2 132 375-524 82-238 (274)
443 2h1r_A Dimethyladenosine trans 98.9 3E-09 1E-13 104.3 8.8 87 63-157 30-117 (299)
444 3tr6_A O-methyltransferase; ce 98.9 3.9E-09 1.3E-13 99.1 9.3 107 375-501 63-175 (225)
445 1sui_A Caffeoyl-COA O-methyltr 98.9 6E-09 2.1E-13 99.3 10.6 99 376-486 79-184 (247)
446 1ne2_A Hypothetical protein TA 98.9 8.9E-09 3E-13 94.8 11.5 117 375-525 50-168 (200)
447 2pt6_A Spermidine synthase; tr 98.9 4.1E-09 1.4E-13 104.3 9.7 138 376-532 116-264 (321)
448 1jg1_A PIMT;, protein-L-isoasp 98.9 4.3E-09 1.5E-13 99.6 8.6 106 373-504 88-193 (235)
449 3v97_A Ribosomal RNA large sub 98.9 4.8E-09 1.6E-13 114.5 10.1 107 74-186 538-658 (703)
450 2i7c_A Spermidine synthase; tr 98.9 3.5E-09 1.2E-13 103.0 8.0 140 376-532 78-226 (283)
451 2efj_A 3,7-dimethylxanthine me 98.8 3E-08 1E-12 99.1 14.5 164 76-241 53-292 (384)
452 3m6w_A RRNA methylase; rRNA me 98.8 1.2E-08 4.2E-13 105.1 11.9 140 360-524 89-256 (464)
453 3m4x_A NOL1/NOP2/SUN family pr 98.8 1.3E-08 4.5E-13 104.7 12.1 142 359-524 92-260 (456)
454 2pbf_A Protein-L-isoaspartate 98.8 6.7E-09 2.3E-13 97.7 9.1 111 374-502 78-195 (227)
455 2avd_A Catechol-O-methyltransf 98.8 8.7E-09 3E-13 97.0 9.7 106 375-500 68-179 (229)
456 3r3h_A O-methyltransferase, SA 98.8 1.9E-09 6.5E-14 102.4 5.0 100 375-486 59-164 (242)
457 2hnk_A SAM-dependent O-methylt 98.8 3.3E-09 1.1E-13 100.7 6.6 109 375-500 59-181 (239)
458 1i1n_A Protein-L-isoaspartate 98.8 8.9E-09 3E-13 96.8 9.5 108 374-503 75-185 (226)
459 3c3p_A Methyltransferase; NP_9 98.8 5.5E-09 1.9E-13 97.0 7.9 97 376-486 56-154 (210)
460 2ih2_A Modification methylase 98.8 5.8E-09 2E-13 107.9 8.7 113 61-186 25-165 (421)
461 3gru_A Dimethyladenosine trans 98.8 9.1E-09 3.1E-13 99.9 9.1 89 62-157 37-125 (295)
462 2plw_A Ribosomal RNA methyltra 98.8 2.9E-08 9.8E-13 91.3 11.9 140 360-525 6-177 (201)
463 1mjf_A Spermidine synthase; sp 98.8 2.4E-08 8.2E-13 97.0 11.8 137 376-531 75-226 (281)
464 2jjq_A Uncharacterized RNA met 98.8 1.1E-07 3.7E-12 97.6 17.2 114 360-503 277-390 (425)
465 3axs_A Probable N(2),N(2)-dime 98.8 1.8E-08 6E-13 101.7 10.7 106 376-502 52-160 (392)
466 3c3y_A Pfomt, O-methyltransfer 98.8 1.1E-08 3.9E-13 96.8 8.8 99 376-486 70-175 (237)
467 2jjq_A Uncharacterized RNA met 98.8 1.6E-08 5.6E-13 103.7 10.6 99 74-185 289-387 (425)
468 1yub_A Ermam, rRNA methyltrans 98.8 7.7E-10 2.6E-14 105.5 0.6 113 63-184 17-144 (245)
469 1qam_A ERMC' methyltransferase 98.8 2.9E-08 9.9E-13 94.3 11.5 72 62-136 17-88 (244)
470 2okc_A Type I restriction enzy 98.8 1.1E-08 3.6E-13 106.4 9.2 121 61-186 157-308 (445)
471 2nyu_A Putative ribosomal RNA 98.8 2.8E-08 9.5E-13 91.0 11.0 140 360-525 6-168 (196)
472 3tqs_A Ribosomal RNA small sub 98.8 1.8E-08 6.3E-13 95.9 9.9 87 63-153 17-103 (255)
473 1inl_A Spermidine synthase; be 98.8 1.4E-08 4.8E-13 99.4 9.2 132 376-526 90-233 (296)
474 3cbg_A O-methyltransferase; cy 98.8 1.1E-08 3.9E-13 96.4 8.1 105 376-500 72-182 (232)
475 3gjy_A Spermidine synthase; AP 98.8 6.6E-08 2.2E-12 94.3 13.5 129 377-525 90-226 (317)
476 3frh_A 16S rRNA methylase; met 98.7 3.2E-08 1.1E-12 91.3 10.1 105 375-505 104-210 (253)
477 2yxl_A PH0851 protein, 450AA l 98.7 3.5E-08 1.2E-12 102.5 11.5 144 359-525 246-417 (450)
478 2qe6_A Uncharacterized protein 98.7 4.3E-08 1.5E-12 94.8 11.4 113 376-503 77-199 (274)
479 1r18_A Protein-L-isoaspartate( 98.7 2E-08 6.9E-13 94.4 8.7 106 374-502 82-196 (227)
480 1fp2_A Isoflavone O-methyltran 98.7 3.5E-08 1.2E-12 99.3 11.0 122 375-526 187-340 (352)
481 3reo_A (ISO)eugenol O-methyltr 98.7 8.7E-08 3E-12 97.0 13.6 124 374-527 201-355 (368)
482 1af7_A Chemotaxis receptor met 98.7 1E-08 3.5E-13 98.6 6.2 109 376-500 105-252 (274)
483 1xj5_A Spermidine synthase 1; 98.7 3.1E-08 1.1E-12 98.2 9.8 109 376-501 120-236 (334)
484 1fp1_D Isoliquiritigenin 2'-O- 98.7 3.2E-08 1.1E-12 100.4 10.0 123 374-526 207-359 (372)
485 2frx_A Hypothetical protein YE 98.7 7.6E-08 2.6E-12 100.1 13.1 137 360-518 103-266 (479)
486 2dul_A N(2),N(2)-dimethylguano 98.7 2.4E-08 8.4E-13 100.7 9.0 103 376-501 47-165 (378)
487 1p91_A Ribosomal RNA large sub 98.7 2.7E-08 9.2E-13 96.1 8.0 108 363-503 73-181 (269)
488 1uir_A Polyamine aminopropyltr 98.7 4.8E-08 1.6E-12 96.4 9.6 133 376-525 77-223 (314)
489 2qfm_A Spermine synthase; sper 98.7 2.1E-08 7.2E-13 98.9 6.9 108 74-184 187-313 (364)
490 1m6e_X S-adenosyl-L-methionnin 98.7 5E-08 1.7E-12 96.8 9.6 167 74-241 50-280 (359)
491 1m6y_A S-adenosyl-methyltransf 98.7 4.3E-08 1.5E-12 95.5 9.0 93 62-154 13-106 (301)
492 3p9c_A Caffeic acid O-methyltr 98.7 1.3E-07 4.5E-12 95.5 12.8 124 374-527 199-353 (364)
493 3fut_A Dimethyladenosine trans 98.7 8.5E-08 2.9E-12 91.9 10.5 99 63-170 35-133 (271)
494 1sqg_A SUN protein, FMU protei 98.6 1.2E-07 4E-12 98.0 11.8 141 359-523 233-400 (429)
495 3ldu_A Putative methylase; str 98.6 2E-07 6.7E-12 94.5 12.8 109 363-484 182-334 (385)
496 3bt7_A TRNA (uracil-5-)-methyl 98.6 2.6E-07 8.7E-12 93.5 13.5 71 361-437 199-269 (369)
497 2b2c_A Spermidine synthase; be 98.6 5.6E-08 1.9E-12 95.6 8.2 139 376-531 108-255 (314)
498 3k0b_A Predicted N6-adenine-sp 98.6 3.2E-07 1.1E-11 93.1 13.8 109 363-484 188-340 (393)
499 3ldg_A Putative uncharacterize 98.6 6.5E-07 2.2E-11 90.4 15.9 109 363-484 181-333 (384)
500 3ldg_A Putative uncharacterize 98.6 2.1E-07 7.3E-12 93.9 12.3 114 69-187 188-345 (384)
No 1
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.85 E-value=3.1e-19 Score=194.78 Aligned_cols=170 Identities=18% Similarity=0.197 Sum_probs=114.7
Q ss_pred EEEEeCCceEEEEEecccccccCCCccceechhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcC
Q 008457 328 IEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDG 407 (564)
Q Consensus 328 ~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~ 407 (564)
..+...|..+.+... ....+|... .......++.. ..++++|||||||+|+++..++..++.+|+++|+
T Consensus 502 ~~v~E~g~~~~v~~~------~~~~tG~f~--d~r~~r~~l~~---~~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~ 570 (703)
T 3v97_A 502 LEVTEYNAHLWVNLT------DYLDTGLFL--DHRIARRMLGQ---MSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDM 570 (703)
T ss_dssp EEEEETTEEEEECSS------SSSSCSCCG--GGHHHHHHHHH---HCTTCEEEEESCTTCHHHHHHHHTTCSEEEEEES
T ss_pred EEEEECCEEEEEecc------ccccCCCcc--cHHHHHHHHHH---hcCCCcEEEeeechhHHHHHHHHCCCCEEEEEeC
Confidence 445556666655321 223556322 22222333332 2378899999999999988888877788999999
Q ss_pred ChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeC-----------CCChHHHHHH
Q 008457 408 DSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI-----------PEAILPLFAT 476 (564)
Q Consensus 408 ~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~-----------~~~~~~l~~~ 476 (564)
|+.+++.+++|+..|++.. .++.+...|.. +.+ +...++||+|++....|. ...+..+++.
T Consensus 571 s~~al~~a~~N~~~ngl~~--~~v~~i~~D~~-----~~l-~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~ 642 (703)
T 3v97_A 571 SRTYLEWAERNLRLNGLTG--RAHRLIQADCL-----AWL-REANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKD 642 (703)
T ss_dssp CHHHHHHHHHHHHHTTCCS--TTEEEEESCHH-----HHH-HHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCc--cceEEEecCHH-----HHH-HhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHH
Confidence 9999999999999998741 35666554432 111 223568999986443332 2356788999
Q ss_pred HHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEcCC
Q 008457 477 AKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 477 ~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
+.++| +|+| .++++...+....+ .+.+.+.|+++..+...
T Consensus 643 a~~~L-kpgG--------~L~~s~~~~~~~~~--~~~l~~~g~~~~~i~~~ 682 (703)
T 3v97_A 643 LKRLL-RAGG--------TIMFSNNKRGFRMD--LDGLAKLGLKAQEITQK 682 (703)
T ss_dssp HHHHE-EEEE--------EEEEEECCTTCCCC--HHHHHHTTEEEEECTTT
T ss_pred HHHhc-CCCc--------EEEEEECCcccccC--HHHHHHcCCceeeeeec
Confidence 99999 9988 88888777665542 45566789987776533
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.84 E-value=2.7e-20 Score=179.50 Aligned_cols=162 Identities=19% Similarity=0.210 Sum_probs=119.3
Q ss_pred CCCCeEEEEcCCccccHHHHHHhC--CCcEEEEEeCChHHHHHHHhccccc--CCCeeEEEecCCcccccCCCCCCceeE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAY--PDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDI 149 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~--~~~~v~~iD~s~~~l~~a~~~~~~~--~~~i~~~~~d~~~~~~~~~~~~~~fD~ 149 (564)
.++.+|||||||+|.++..|++.. ++++|+|+|+|+.|++.|+++.... ..+++++++|+... +.+.||+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~------~~~~~d~ 142 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI------AIENASM 142 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC------CCCSEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc------ccccccc
Confidence 689999999999999999999874 5789999999999999999986533 35799999998643 3457999
Q ss_pred EEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhh--hhccc------cccccccee-ecCC--Cceeec
Q 008457 150 VTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQE--RLTGK------DQKISENFY-VRGD--GTRAFY 218 (564)
Q Consensus 150 V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~--~~~~~------~~~~~~~~~-~~~~--~~~~~~ 218 (564)
|+++.++||+++.+...+|++++++|||||.|++.+......... .+... .....+... .... ......
T Consensus 143 v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~ 222 (261)
T 4gek_A 143 VVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLT 222 (261)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCC
T ss_pred ceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccC
Confidence 999999999998888899999999999999999988765432111 11000 000000000 0000 001124
Q ss_pred cCHHHHHHHHHhCCCcEEEeeee
Q 008457 219 FSNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 219 ~~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
++.+++.++|+++||+.+++++.
T Consensus 223 ~s~~~~~~~L~~AGF~~ve~~fq 245 (261)
T 4gek_A 223 DSVETHKARLHKAGFEHSELWFQ 245 (261)
T ss_dssp BCHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCHHHHHHHHHHcCCCeEEEEEE
Confidence 68999999999999998887654
No 3
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.84 E-value=8.9e-20 Score=178.46 Aligned_cols=200 Identities=20% Similarity=0.288 Sum_probs=130.6
Q ss_pred EEEEEecccccccCCCccceechhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcC-ChhHHHHH
Q 008457 337 FKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDG-DSIALDLL 415 (564)
Q Consensus 337 ~~i~~~~~~~~~~~~~~G~~~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~-~~~~l~~~ 415 (564)
..+++.... ..+|+.+|+++..|++++..+....++++|||||||+|.++..++..+..+|+++|+ ++.+++.+
T Consensus 45 ~~~~i~g~~-----~~~g~~~~~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a 119 (281)
T 3bzb_A 45 VQVQTTQEH-----PLWTSHVWSGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSL 119 (281)
T ss_dssp EEEECC----------------CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHH
T ss_pred eEEEECCCC-----CCCCceeecHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHH
Confidence 555554433 678999999999999999998766788999999999998887777666669999999 89999999
Q ss_pred HHHHHhcCCCCC------CCceEEEEeecCCCccchhhhh-hcCCCccEEEEeceeeCCCChHHHHHHHHHHhhc---c-
Q 008457 416 AQNVTANLKPPF------LAKLITKRLEWGNRDHIEAIKE-ENNEGFEVILGTDVSYIPEAILPLFATAKELTAS---S- 484 (564)
Q Consensus 416 ~~n~~~n~~~~~------~~~i~~~~l~w~~~~~~~~~~~-~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~---~- 484 (564)
++|+..|..... ..++.+..++|++.. ..+.. +..++||+|+++|++|+...+..+++++.++| + |
T Consensus 120 ~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~L-k~~~p~ 196 (281)
T 3bzb_A 120 ESNIREHTANSCSSETVKRASPKVVPYRWGDSP--DSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLL-ALPAND 196 (281)
T ss_dssp HHHHHTTCC----------CCCEEEECCTTSCT--HHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHB-CCTTTC
T ss_pred HHHHHHhhhhhcccccCCCCCeEEEEecCCCcc--HHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHh-cccCCC
Confidence 999966532111 136888899998642 11111 13578999999999999999999999999999 8 8
Q ss_pred -CCCCCCCCCcEEEEEEeeccC----ChhHHHHHHHHcC-CeEEEEcCCCCCCCCccccccccccCCCCcccCCCCceeE
Q 008457 485 -NKSLREDQQPAFILCHIFRQV----DEPSMLSAATQCG-FRLVDKWPSKNSASPSESIISSWFSENGHEVYLPSPALNI 558 (564)
Q Consensus 485 -~g~~~~~~~~~~~~~~~~r~~----~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 558 (564)
+| .+++++..++. ....|++.+.+.| |.++.+.+.... ..+|+.+.+++..+ ..+++
T Consensus 197 ~gG--------~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~~~~~~--------~~~f~~~~~~~~~r-~~V~~ 259 (281)
T 3bzb_A 197 PTA--------VALVTFTHHRPHLAERDLAFFRLVNADGALIAEPWLSPLQM--------DPMFPDDPGDVCIR-GQVHR 259 (281)
T ss_dssp TTC--------EEEEEECC--------CTHHHHHHHHSTTEEEEEEECCC---------------------------CEE
T ss_pred CCC--------EEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEecccccc--------ccccccCCcchhcc-ceEEE
Confidence 76 77776665442 2357899999999 999999744221 12466666665553 33444
Q ss_pred EEe
Q 008457 559 MYF 561 (564)
Q Consensus 559 ~~~ 561 (564)
+.+
T Consensus 260 ~~l 262 (281)
T 3bzb_A 260 WRL 262 (281)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 4
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.83 E-value=1.4e-19 Score=169.59 Aligned_cols=164 Identities=18% Similarity=0.136 Sum_probs=128.7
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++. ++.+.++|+... + ++++||+|++.
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~----~-~~~~fD~v~~~ 109 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL-----GRPVRTMLFHQL----D-AIDAYDAVWAH 109 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH-----TSCCEECCGGGC----C-CCSCEEEEEEC
T ss_pred CCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc-----CCceEEeeeccC----C-CCCcEEEEEec
Confidence 46889999999999999999988 679999999999999999875 467778887542 2 57899999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCC-
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENG- 232 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG- 232 (564)
.+++|++.+++..++++++++|||||++++......... .........+++.+++.++++++|
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~aG~ 173 (211)
T 3e23_A 110 ACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEG----------------RDKLARYYNYPSEEWLRARYAEAGT 173 (211)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCE----------------ECTTSCEECCCCHHHHHHHHHHHCC
T ss_pred CchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccc----------------ccccchhccCCCHHHHHHHHHhCCC
Confidence 999999888999999999999999999999865443210 001122334679999999999999
Q ss_pred CcEEEeeeeeccccccccccccceeEEEEEEEecCCCC
Q 008457 233 FDVEELGLCCKQVENRARELVMNRRWVQAVFCSSGGAT 270 (564)
Q Consensus 233 f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 270 (564)
|+++...........+. ...|+..+..+++..+
T Consensus 174 f~~~~~~~~~~~~~~~~-----~~~wl~~~~~~~~~~~ 206 (211)
T 3e23_A 174 WASVAVESSEGKGFDQE-----LAQFLHVSVRKPELEH 206 (211)
T ss_dssp CSEEEEEEEEEECTTSC-----EEEEEEEEEECCCC--
T ss_pred cEEEEEEeccCCCCCCC-----CceEEEEEEecCcccc
Confidence 99998776554333322 2679988888877544
No 5
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.83 E-value=2.1e-20 Score=181.39 Aligned_cols=190 Identities=15% Similarity=0.195 Sum_probs=135.7
Q ss_pred HHHHH--HHhHhHHHHHHhhccccccc--cchhHHHHhhhc--cCCCCCeEEEEcCCccccHHHHHHhCCCc-EEEEEeC
Q 008457 35 DKYER--EAKKYWDLFYKRHQDRFFKD--RHYLDKEWGRYF--SGAGRKDVLEVGCGAGNTIFPLIAAYPDV-FVYACDF 107 (564)
Q Consensus 35 ~~y~~--~a~~ywd~~~~~~~~~~~~~--~~~~~~~~~~~l--~~~~~~~VLDiGcG~G~~~~~l~~~~~~~-~v~~iD~ 107 (564)
+.|+. ....||+.||+.....+..+ .+|+...+.+++ ...++.+|||||||+|.++..++.. +. +|+|+|+
T Consensus 9 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~ 86 (263)
T 2a14_A 9 DEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDF 86 (263)
T ss_dssp HHHHHHCCHHHHHHHHCCCCCSCCHHHHHHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEES
T ss_pred hhhhhccCHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccc
Confidence 34555 46789999997765555443 566666776665 3467889999999999887766655 44 6999999
Q ss_pred ChHHHHHHHhcccccC------------------------------CCee-EEEecCCcccccCCCCCCceeEEEEcccc
Q 008457 108 SPRAVNLVMTHKDFTE------------------------------TRVS-TFVCDLISDDLSRQISPSSIDIVTMVFVL 156 (564)
Q Consensus 108 s~~~l~~a~~~~~~~~------------------------------~~i~-~~~~d~~~~~~~~~~~~~~fD~V~~~~vl 156 (564)
|+.|++.|+++..... .++. +.++|+.......+...++||+|+++.+|
T Consensus 87 s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l 166 (263)
T 2a14_A 87 TDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAM 166 (263)
T ss_dssp CHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCH
T ss_pred cHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHH
Confidence 9999999987643211 1233 88899876321112235789999999999
Q ss_pred cCCC--hhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCC-ceeeccCHHHHHHHHHhCCC
Q 008457 157 SAVS--PEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDG-TRAFYFSNDFLTSLFKENGF 233 (564)
Q Consensus 157 ~~~~--~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~aGf 233 (564)
||+. .+++..++++++++|||||.|++.+..... ++..+.. ...++++.+++.++|+++||
T Consensus 167 ~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~----------------~~~~g~~~~~~~~~~~~~l~~~l~~aGF 230 (263)
T 2a14_A 167 ECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLP----------------SYMVGKREFSCVALEKGEVEQAVLDAGF 230 (263)
T ss_dssp HHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC----------------EEEETTEEEECCCCCHHHHHHHHHHTTE
T ss_pred HHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCc----------------cceeCCeEeeccccCHHHHHHHHHHCCC
Confidence 9863 367889999999999999999998643221 1111111 11235699999999999999
Q ss_pred cEEEeeeee
Q 008457 234 DVEELGLCC 242 (564)
Q Consensus 234 ~~~~~~~~~ 242 (564)
+++......
T Consensus 231 ~i~~~~~~~ 239 (263)
T 2a14_A 231 DIEQLLHSP 239 (263)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEeecc
Confidence 998876653
No 6
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.82 E-value=1.6e-19 Score=168.07 Aligned_cols=181 Identities=14% Similarity=0.084 Sum_probs=133.3
Q ss_pred hHHHHHHHHHhHhHHHHHHhhccccccccchhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHH
Q 008457 32 FWRDKYEREAKKYWDLFYKRHQDRFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRA 111 (564)
Q Consensus 32 ~~~~~y~~~a~~ywd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~ 111 (564)
...+.|+..+..|.+.+ ... ..........+..++. ..+.+|||+|||+|.++..+++. +.+|+|+|+|+.+
T Consensus 4 ~~~~~y~~~a~~y~~~~-~~~----~~~~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~ 75 (203)
T 3h2b_A 4 DVSKAYSSPTFDAEALL-GTV----ISAEDPDRVLIEPWAT-GVDGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRL 75 (203)
T ss_dssp HHHHHHHCTTTCHHHHT-CSS----CCTTCTTHHHHHHHHH-HCCSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHH
T ss_pred HHHHHHhhHHHHHHHHh-hhh----ccccHHHHHHHHHHhc-cCCCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHH
Confidence 45667777777664432 111 1111111122222232 33889999999999999999988 6799999999999
Q ss_pred HHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCch
Q 008457 112 VNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDL 191 (564)
Q Consensus 112 l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~ 191 (564)
++.|+++. .++.++++|+... ++++++||+|++..+++|++.+++..+++++.++|||||.+++.++.....
T Consensus 76 ~~~a~~~~----~~~~~~~~d~~~~----~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 147 (203)
T 3h2b_A 76 VELARQTH----PSVTFHHGTITDL----SDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSL 147 (203)
T ss_dssp HHHHHHHC----TTSEEECCCGGGG----GGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSC
T ss_pred HHHHHHhC----CCCeEEeCccccc----ccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCch
Confidence 99999874 3688999998653 356789999999999999987889999999999999999999988765431
Q ss_pred hhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCCCcEEEeeeeec
Q 008457 192 AQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENGFDVEELGLCCK 243 (564)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~ 243 (564)
. . ........++++.+++.++++++||+++.......
T Consensus 148 ~--------------~-~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 148 E--------------P-MYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp E--------------E-ECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred h--------------h-hhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 0 0 00112233467999999999999999998766543
No 7
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.82 E-value=1.4e-19 Score=173.51 Aligned_cols=178 Identities=15% Similarity=0.180 Sum_probs=128.6
Q ss_pred HHHHHhHhHHHHHHhhcccccc-ccc-hhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHH
Q 008457 37 YEREAKKYWDLFYKRHQDRFFK-DRH-YLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNL 114 (564)
Q Consensus 37 y~~~a~~ywd~~~~~~~~~~~~-~~~-~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~ 114 (564)
+......||+..|......+.. ... .+...+..+....++.+|||+|||+|..+..|++. |.+|+|+|+|+.|++.
T Consensus 28 ~~~~~~~~Wd~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~ 105 (252)
T 2gb4_A 28 NQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIRE 105 (252)
T ss_dssp TCCCCHHHHHHHHHHTCCTTCCTTCCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHH
T ss_pred cccCCHHHHHHHHhcCCCCcccCCCCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHH
Confidence 3344567888887665433321 222 23333333333357899999999999999999998 7899999999999999
Q ss_pred HHhcccc------------------cCCCeeEEEecCCcccccCCCC-CCceeEEEEcccccCCChhHHHHHHHHHHhcc
Q 008457 115 VMTHKDF------------------TETRVSTFVCDLISDDLSRQIS-PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVL 175 (564)
Q Consensus 115 a~~~~~~------------------~~~~i~~~~~d~~~~~~~~~~~-~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~L 175 (564)
|+++... ...++++.++|+..... . .++||+|++..+++|++.++...+++++.++|
T Consensus 106 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~----~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~L 181 (252)
T 2gb4_A 106 FFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR----ANIGKFDRIWDRGALVAINPGDHDRYADIILSLL 181 (252)
T ss_dssp HHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG----GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTE
T ss_pred HHHhcccccccccccccccccccccCCCceEEEECccccCCc----ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHc
Confidence 9876431 23679999999975432 3 37999999999999999888889999999999
Q ss_pred CCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCCCcEEEeee
Q 008457 176 KPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENGFDVEELGL 240 (564)
Q Consensus 176 kpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 240 (564)
||||++++.++..... . .....+.++++++.++|.. +|+++....
T Consensus 182 kpGG~l~l~~~~~~~~--------~-----------~~g~~~~~~~~el~~~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 182 RKEFQYLVAVLSYDPT--------K-----------HAGPPFYVPSAELKRLFGT-KCSMQCLEE 226 (252)
T ss_dssp EEEEEEEEEEEECCTT--------S-----------CCCSSCCCCHHHHHHHHTT-TEEEEEEEE
T ss_pred CCCeEEEEEEEecCCc--------c-----------CCCCCCCCCHHHHHHHhhC-CeEEEEEec
Confidence 9999997654432110 0 0011223689999999987 599887653
No 8
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.82 E-value=1.9e-19 Score=171.65 Aligned_cols=183 Identities=16% Similarity=0.199 Sum_probs=137.9
Q ss_pred HHhHhHHHHHHhhccccccc-cchhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhc
Q 008457 40 EAKKYWDLFYKRHQDRFFKD-RHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTH 118 (564)
Q Consensus 40 ~a~~ywd~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~ 118 (564)
....+|+..|......+... .......+..... .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++
T Consensus 31 ~~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~ 107 (235)
T 3lcc_A 31 VEEGGWEKCWEEEITPWDQGRATPLIVHLVDTSS-LPLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANET 107 (235)
T ss_dssp HHHHHHHHHHHTTCCTTCCSSCCHHHHHHHHTTC-SCCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHH
T ss_pred cCHHHHHHHHhcCCCCcccCCCCHHHHHHHHhcC-CCCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHH
Confidence 34578998887754444322 2212222222222 34569999999999999988764 78999999999999999998
Q ss_pred ccc--cCCCeeEEEecCCcccccCCCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhh
Q 008457 119 KDF--TETRVSTFVCDLISDDLSRQISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERL 196 (564)
Q Consensus 119 ~~~--~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~ 196 (564)
... ...++++.++|+.... ++++||+|++..+++|++++++..+++++.++|||||.+++.++.....
T Consensus 108 ~~~~~~~~~v~~~~~d~~~~~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----- 177 (235)
T 3lcc_A 108 YGSSPKAEYFSFVKEDVFTWR-----PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDH----- 177 (235)
T ss_dssp HTTSGGGGGEEEECCCTTTCC-----CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC-----
T ss_pred hhccCCCcceEEEECchhcCC-----CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc-----
Confidence 764 2357999999986532 4569999999999999988899999999999999999999987654321
Q ss_pred cccccccccceeecCCCceeeccCHHHHHHHHHhCCCcEEEeeeeecccccccc
Q 008457 197 TGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENGFDVEELGLCCKQVENRAR 250 (564)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~ 250 (564)
.....+.++.+++.++|+++||+++.+.........+..
T Consensus 178 ---------------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~g 216 (235)
T 3lcc_A 178 ---------------VGGPPYKVDVSTFEEVLVPIGFKAVSVEENPHAIPTRKG 216 (235)
T ss_dssp ---------------CSCSSCCCCHHHHHHHHGGGTEEEEEEEECTTCCTTTTT
T ss_pred ---------------CCCCCccCCHHHHHHHHHHcCCeEEEEEecCCccccccC
Confidence 111223468999999999999999998887776666544
No 9
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.80 E-value=6.5e-19 Score=167.81 Aligned_cols=164 Identities=17% Similarity=0.179 Sum_probs=123.8
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
..++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.|+++....+ ++.++++|+... +++ ++||+|++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~----~~~-~~fD~v~~ 115 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKY----DFE-EKYDMVVS 115 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTC----CCC-SCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhcc----CCC-CCceEEEE
Confidence 367899999999999999999999888999999999999999999876544 899999998653 223 89999999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhh--cc-cc-----ccccc----ceeecCCCceeeccC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERL--TG-KD-----QKISE----NFYVRGDGTRAFYFS 220 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~--~~-~~-----~~~~~----~~~~~~~~~~~~~~~ 220 (564)
..+++|++..+...++++++++|||||.+++.++.......... .. +. ..... .++. ...+...++
T Consensus 116 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 193 (234)
T 3dtn_A 116 ALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYE--RSKLDKDIE 193 (234)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC------CCCCCB
T ss_pred eCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHH--hcccccccC
Confidence 99999998666668999999999999999998876544221110 00 00 00000 0000 112334578
Q ss_pred HHHHHHHHHhCCCcEEEeeeeecc
Q 008457 221 NDFLTSLFKENGFDVEELGLCCKQ 244 (564)
Q Consensus 221 ~~~l~~~l~~aGf~~~~~~~~~~~ 244 (564)
.+++.++|+++||+.+++.+....
T Consensus 194 ~~~~~~ll~~aGF~~v~~~~~~~~ 217 (234)
T 3dtn_A 194 MNQQLNWLKEAGFRDVSCIYKYYQ 217 (234)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEETT
T ss_pred HHHHHHHHHHcCCCceeeeeeecc
Confidence 999999999999999988766543
No 10
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.80 E-value=1.4e-18 Score=163.54 Aligned_cols=156 Identities=21% Similarity=0.174 Sum_probs=115.5
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
..++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++. ...++.+.++|+... +++++||+|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~---~~~~~~~~~~d~~~~-----~~~~~~D~v~~ 113 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRH---GLDNVEFRQQDLFDW-----TPDRQWDAVFF 113 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGG---CCTTEEEEECCTTSC-----CCSSCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhc---CCCCeEEEecccccC-----CCCCceeEEEE
Confidence 356789999999999999999998 77999999999999999982 226799999998653 36789999999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcc-cccccccceeecCCCce----eeccCHHHHHHH
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTG-KDQKISENFYVRGDGTR----AFYFSNDFLTSL 227 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~ 227 (564)
..+++|++......+++++.++|||||.+++.++............ ......... ...+.+ ..+++.+++.++
T Consensus 114 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 191 (218)
T 3ou2_A 114 AHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRT--LQDGRSFRIVKVFRSPAELTER 191 (218)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEE--CTTSCEEEEECCCCCHHHHHHH
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeee--cCCcchhhHhhcCCCHHHHHHH
Confidence 9999999866678999999999999999999988764322111110 000000000 112221 225799999999
Q ss_pred HHhCCCcEEEeee
Q 008457 228 FKENGFDVEELGL 240 (564)
Q Consensus 228 l~~aGf~~~~~~~ 240 (564)
++++||++.....
T Consensus 192 l~~aGf~v~~~~~ 204 (218)
T 3ou2_A 192 LTALGWSCSVDEV 204 (218)
T ss_dssp HHHTTEEEEEEEE
T ss_pred HHHCCCEEEeeec
Confidence 9999999655443
No 11
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.80 E-value=2.7e-19 Score=168.70 Aligned_cols=163 Identities=20% Similarity=0.285 Sum_probs=119.4
Q ss_pred HhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCc
Q 008457 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSS 146 (564)
Q Consensus 67 ~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 146 (564)
+.+.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++.. .++.+.++|+... +++ ++
T Consensus 37 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~----~~~-~~ 106 (220)
T 3hnr_A 37 ILEDVVNKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSF----EVP-TS 106 (220)
T ss_dssp HHHHHHHTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSC----CCC-SC
T ss_pred HHHHhhccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhc----CCC-CC
Confidence 334444468899999999999999999988 7899999999999999998865 5788999998653 334 89
Q ss_pred eeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhh-hccccccccccee-ecCCCceeeccCHHHH
Q 008457 147 IDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQER-LTGKDQKISENFY-VRGDGTRAFYFSNDFL 224 (564)
Q Consensus 147 fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 224 (564)
||+|++..+++|++......+|+++.++|||||.+++.++......... ...... ...+. ........++++.+++
T Consensus 107 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 184 (220)
T 3hnr_A 107 IDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAK--QRGFHQLANDLQTEYYTRIPVM 184 (220)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHH--HTTCHHHHHHHHHSCCCBHHHH
T ss_pred eEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHH--hCCCccchhhcchhhcCCHHHH
Confidence 9999999999999755555699999999999999999986654432211 100000 00000 0001112235589999
Q ss_pred HHHHHhCCCcEEEeeee
Q 008457 225 TSLFKENGFDVEELGLC 241 (564)
Q Consensus 225 ~~~l~~aGf~~~~~~~~ 241 (564)
.++++++||+++.....
T Consensus 185 ~~~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 185 QTIFENNGFHVTFTRLN 201 (220)
T ss_dssp HHHHHHTTEEEEEEECS
T ss_pred HHHHHHCCCEEEEeecc
Confidence 99999999988766543
No 12
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.79 E-value=5.4e-19 Score=164.34 Aligned_cols=169 Identities=12% Similarity=0.082 Sum_probs=129.1
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++ +|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+.++.+.++|+... ++++++||+|++.
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~v~~~ 101 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADF----DIVADAWEGIVSI 101 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTB----SCCTTTCSEEEEE
T ss_pred CCC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhc----CCCcCCccEEEEE
Confidence 345 9999999999999999887 67999999999999999988765455789999998653 3567899999995
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCCC
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENGF 233 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 233 (564)
+.|++.+++..+++++.++|||||.+++.++....... . . .......++++.+++.++|+ ||
T Consensus 102 --~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~---~-~----------~~~~~~~~~~~~~~l~~~l~--Gf 163 (202)
T 2kw5_A 102 --FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY---N-T----------GGPKDLDLLPKLETLQSELP--SL 163 (202)
T ss_dssp --CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG---T-S----------CCSSSGGGCCCHHHHHHHCS--SS
T ss_pred --hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC---C-C----------CCCCcceeecCHHHHHHHhc--Cc
Confidence 45667678999999999999999999999887654321 0 0 00112234679999999998 99
Q ss_pred cEEEeeeeeccccccccccccceeEEEEEEEecCC
Q 008457 234 DVEELGLCCKQVENRARELVMNRRWVQAVFCSSGG 268 (564)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 268 (564)
+++.......+... .......+.|+....++.+.
T Consensus 164 ~v~~~~~~~~~~~~-g~~~~~~~~~i~~~~~~~~~ 197 (202)
T 2kw5_A 164 NWLIANNLERNLDE-GAYHQGKAALIQLLGQKLEH 197 (202)
T ss_dssp CEEEEEEEEEECSC-SSSSCCEEEEEEEEECCCSS
T ss_pred eEEEEEEEEeecCC-CCCcccHHHHHHHHHHhhhh
Confidence 99987776655422 23334558899887666653
No 13
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.78 E-value=5.6e-19 Score=164.23 Aligned_cols=148 Identities=12% Similarity=0.114 Sum_probs=113.7
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccc-------------cCCCeeEEEecCCc
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-------------TETRVSTFVCDLIS 135 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~-------------~~~~i~~~~~d~~~ 135 (564)
..+...++.+|||+|||+|..+..|++. +.+|+|+|+|+.|++.|+++... ...+++++++|+..
T Consensus 16 ~~l~~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 93 (203)
T 1pjz_A 16 SSLNVVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA 93 (203)
T ss_dssp HHHCCCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred HhcccCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc
Confidence 3334467899999999999999999998 78999999999999999987542 23579999999965
Q ss_pred ccccCCCCC-CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCc
Q 008457 136 DDLSRQISP-SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGT 214 (564)
Q Consensus 136 ~~~~~~~~~-~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (564)
.. +++ ++||+|++..+++|++.++...++++++++|||||++++........ . ...
T Consensus 94 l~----~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~---------~----------~~~ 150 (203)
T 1pjz_A 94 LT----ARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA---------L----------LEG 150 (203)
T ss_dssp ST----HHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS---------S----------SSS
T ss_pred CC----cccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc---------c----------cCC
Confidence 42 233 68999999999999987788889999999999999855544332110 0 011
Q ss_pred eeeccCHHHHHHHHHhCCCcEEEeeeee
Q 008457 215 RAFYFSNDFLTSLFKENGFDVEELGLCC 242 (564)
Q Consensus 215 ~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 242 (564)
..+.++.+++.+++++ ||+++......
T Consensus 151 ~~~~~~~~el~~~~~~-gf~i~~~~~~~ 177 (203)
T 1pjz_A 151 PPFSVPQTWLHRVMSG-NWEVTKVGGQD 177 (203)
T ss_dssp CCCCCCHHHHHHTSCS-SEEEEEEEESS
T ss_pred CCCCCCHHHHHHHhcC-CcEEEEecccc
Confidence 1223689999999998 99987665443
No 14
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.78 E-value=1.3e-18 Score=167.80 Aligned_cols=155 Identities=14% Similarity=0.246 Sum_probs=121.7
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPS 145 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 145 (564)
.+.+.+...++.+|||||||+|.++..+++.+ ..+|+++|+|+.+++.|+++.... .++.+.++|+... +++++
T Consensus 84 ~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~----~~~~~ 157 (254)
T 1xtp_A 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETA----TLPPN 157 (254)
T ss_dssp HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGC----CCCSS
T ss_pred HHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHC----CCCCC
Confidence 33444455678999999999999999998875 457999999999999999887543 5789999998643 45678
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHH
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLT 225 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 225 (564)
+||+|++..+++|++.+++..+++++.++|||||++++.++..... .++.. .....++++.+++.
T Consensus 158 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~--------------~~~~~-~~~~~~~~~~~~~~ 222 (254)
T 1xtp_A 158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGD--------------RFLVD-KEDSSLTRSDIHYK 222 (254)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--C--------------CEEEE-TTTTEEEBCHHHHH
T ss_pred CeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcc--------------cceec-ccCCcccCCHHHHH
Confidence 9999999999999987789999999999999999999987543211 00111 11223356999999
Q ss_pred HHHHhCCCcEEEeeee
Q 008457 226 SLFKENGFDVEELGLC 241 (564)
Q Consensus 226 ~~l~~aGf~~~~~~~~ 241 (564)
++|+++||+++.....
T Consensus 223 ~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 223 RLFNESGVRVVKEAFQ 238 (254)
T ss_dssp HHHHHHTCCEEEEEEC
T ss_pred HHHHHCCCEEEEeeec
Confidence 9999999999877554
No 15
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.78 E-value=9.6e-19 Score=167.34 Aligned_cols=145 Identities=17% Similarity=0.243 Sum_probs=116.7
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ +.+.++|+... ..++++++||+|++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~--~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK-------FNVVKSDAIEY--LKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT-------SEEECSCHHHH--HHTSCTTCBSEEEEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh-------cceeeccHHHH--hhhcCCCCeeEEEEC
Confidence 56799999999999999999988 67899999999999999876 56777777442 125678999999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCCC
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENGF 233 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 233 (564)
.+++|++..+...+++++.++|||||.+++.+++........- ++ ....+..+++.+++.++++++||
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~l~~~l~~aGf 176 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLIN----------FY--IDPTHKKPVHPETLKFILEYLGF 176 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHH----------HT--TSTTCCSCCCHHHHHHHHHHHTC
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHH----------Hh--cCccccccCCHHHHHHHHHHCCC
Confidence 9999998778899999999999999999999887654322110 00 11233446789999999999999
Q ss_pred cEEEeeee
Q 008457 234 DVEELGLC 241 (564)
Q Consensus 234 ~~~~~~~~ 241 (564)
+++.....
T Consensus 177 ~~~~~~~~ 184 (240)
T 3dli_A 177 RDVKIEFF 184 (240)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 98876554
No 16
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.78 E-value=7.6e-19 Score=168.15 Aligned_cols=146 Identities=16% Similarity=0.209 Sum_probs=116.2
Q ss_pred CCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc-CCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~-~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.|+++.... ..++.+.++|+... ++++++||+|++.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF----TPEPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC----CCCSSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhc----CCCCCCEEEEEEc
Confidence 68999999999999999988875 568999999999999999887644 35688999987543 3456789999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCCC
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENGF 233 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 233 (564)
.+++|++......+++++.++|||||.+++.++.... . ..+.. .......+.+++.++|+++||
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~---~-----------~~~~~--~~~~~~~~~~~~~~~l~~aGf 217 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE---G-----------VILDD--VDSSVCRDLDVVRRIICSAGL 217 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS---S-----------EEEET--TTTEEEEBHHHHHHHHHHTTC
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC---c-----------ceecc--cCCcccCCHHHHHHHHHHcCC
Confidence 9999998666779999999999999999998765432 0 11111 111223489999999999999
Q ss_pred cEEEeeee
Q 008457 234 DVEELGLC 241 (564)
Q Consensus 234 ~~~~~~~~ 241 (564)
+++.....
T Consensus 218 ~~~~~~~~ 225 (241)
T 2ex4_A 218 SLLAEERQ 225 (241)
T ss_dssp CEEEEEEC
T ss_pred eEEEeeec
Confidence 99887554
No 17
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.78 E-value=2.4e-18 Score=167.15 Aligned_cols=162 Identities=16% Similarity=0.194 Sum_probs=127.5
Q ss_pred hHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCC
Q 008457 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 63 ~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 142 (564)
....+.+.+...++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|+++.... .++++.++|+... ++
T Consensus 43 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~----~~ 116 (266)
T 3ujc_A 43 ATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILTK----EF 116 (266)
T ss_dssp HHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTC----CC
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccC----CC
Confidence 34455556666788999999999999999999976 689999999999999999987654 7899999998653 45
Q ss_pred CCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchh--hhhhcccccccccceeecCCCceeeccC
Q 008457 143 SPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLA--QERLTGKDQKISENFYVRGDGTRAFYFS 220 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (564)
++++||+|++..+++|++..++..+++++.++|||||.+++.++...... ...+.... ......+++
T Consensus 117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 185 (266)
T 3ujc_A 117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYV-----------KQRKYTLIT 185 (266)
T ss_dssp CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHH-----------HHHTCCCCC
T ss_pred CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHH-----------hcCCCCCCC
Confidence 78899999999999999888999999999999999999999886544311 00000000 001122568
Q ss_pred HHHHHHHHHhCCCcEEEeeee
Q 008457 221 NDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 221 ~~~l~~~l~~aGf~~~~~~~~ 241 (564)
.+++.++++++||+++.....
T Consensus 186 ~~~~~~~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 186 VEEYADILTACNFKNVVSKDL 206 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHcCCeEEEEEeC
Confidence 999999999999999876544
No 18
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.78 E-value=6.2e-19 Score=165.88 Aligned_cols=168 Identities=14% Similarity=0.147 Sum_probs=122.6
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~ 142 (564)
..+.+.+...++ +|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|+++....+ .++++.++|+... ++
T Consensus 34 ~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~ 107 (219)
T 3dlc_A 34 ENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI----PI 107 (219)
T ss_dssp HHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC----SS
T ss_pred HHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC----CC
Confidence 444455554445 9999999999999999998 67899999999999999998865433 4799999998653 45
Q ss_pred CCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHH
Q 008457 143 SPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSND 222 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (564)
++++||+|++..+++|+ .++..+++++.++|||||.+++.+..........+..........+... ...+..+++.+
T Consensus 108 ~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 184 (219)
T 3dlc_A 108 EDNYADLIVSRGSVFFW--EDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEF-NRKNISQENVE 184 (219)
T ss_dssp CTTCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHH-HHHHSSHHHHH
T ss_pred CcccccEEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhh-hhhccccCCHH
Confidence 78899999999999999 4788999999999999999999876554422222111111111111000 00122245889
Q ss_pred HHHHHHHhCCCcEEEeeee
Q 008457 223 FLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 223 ~l~~~l~~aGf~~~~~~~~ 241 (564)
++.++|+++||+.+++...
T Consensus 185 ~~~~~l~~aGf~~v~~~~~ 203 (219)
T 3dlc_A 185 RFQNVLDEIGISSYEIILG 203 (219)
T ss_dssp HHHHHHHHHTCSSEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEec
Confidence 9999999999998876543
No 19
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.78 E-value=6.3e-18 Score=160.88 Aligned_cols=168 Identities=20% Similarity=0.286 Sum_probs=123.4
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCC------CeeEEEecCCcccccCCCCCCce
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTET------RVSTFVCDLISDDLSRQISPSSI 147 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~------~i~~~~~d~~~~~~~~~~~~~~f 147 (564)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+. ++.+.+.|+... ++++++|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~ 102 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL----SFHDSSF 102 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC----CSCTTCE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc----CCCCCce
Confidence 57899999999999999999988 77999999999999999987654332 678999998643 4568899
Q ss_pred eEEEEcccccCCC-hhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhh---hccc--ccccccceeecCC-----Ccee
Q 008457 148 DIVTMVFVLSAVS-PEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQER---LTGK--DQKISENFYVRGD-----GTRA 216 (564)
Q Consensus 148 D~V~~~~vl~~~~-~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~-----~~~~ 216 (564)
|+|++..+++|++ .+....+++++.++|||||.+++.++......... .... .......+..... ....
T Consensus 103 D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (235)
T 3sm3_A 103 DFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIA 182 (235)
T ss_dssp EEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEE
T ss_pred eEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceee
Confidence 9999999999996 34455899999999999999999887654221110 0000 0000001111100 1234
Q ss_pred eccCHHHHHHHHHhCCCcEEEeeeeeccccc
Q 008457 217 FYFSNDFLTSLFKENGFDVEELGLCCKQVEN 247 (564)
Q Consensus 217 ~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~ 247 (564)
++++.+++.++|+++||+++.+.........
T Consensus 183 ~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~ 213 (235)
T 3sm3_A 183 HHFTEKELVFLLTDCRFEIDYFRVKELETRT 213 (235)
T ss_dssp ECBCHHHHHHHHHTTTEEEEEEEEEEEECTT
T ss_pred EeCCHHHHHHHHHHcCCEEEEEEecceeecc
Confidence 4789999999999999999988766544444
No 20
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.77 E-value=1.4e-18 Score=166.98 Aligned_cols=155 Identities=14% Similarity=0.057 Sum_probs=116.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... ++++.++|+... +++++||+|++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~-----~~~~~fD~v~~~ 110 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH--FNDITCVEASEEAISHAQGRLKD---GITYIHSRFEDA-----QLPRRYDNIVLT 110 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT--CSCEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGC-----CCSSCEEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHh--CCcEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHc-----CcCCcccEEEEh
Confidence 46789999999999999999887 45799999999999999988753 789999998643 267899999999
Q ss_pred ccccCCChhHHHHHHHHHH-hccCCCeEEEEEecCCCchhhhhh--cccccccccceeecCCCceeeccCHHHHHHHHHh
Q 008457 154 FVLSAVSPEKMSLVLQNIK-KVLKPTGYVLFRDYAIGDLAQERL--TGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKE 230 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~-r~LkpgG~lii~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 230 (564)
.+++|++ ++..+|++++ ++|||||.+++.+++......... ..................+..+++.+++.+++++
T Consensus 111 ~~l~~~~--~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 188 (250)
T 2p7i_A 111 HVLEHID--DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASR 188 (250)
T ss_dssp SCGGGCS--SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHH
T ss_pred hHHHhhc--CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHH
Confidence 9999995 6789999999 999999999999877654322110 0110000000000001122346799999999999
Q ss_pred CCCcEEEeee
Q 008457 231 NGFDVEELGL 240 (564)
Q Consensus 231 aGf~~~~~~~ 240 (564)
+||+++....
T Consensus 189 ~Gf~~~~~~~ 198 (250)
T 2p7i_A 189 AGLQVTYRSG 198 (250)
T ss_dssp TTCEEEEEEE
T ss_pred CCCeEEEEee
Confidence 9999987643
No 21
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.77 E-value=7.2e-18 Score=161.34 Aligned_cols=157 Identities=20% Similarity=0.215 Sum_probs=122.3
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 144 (564)
..+.+.+ .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ..++.++++|+... ++++
T Consensus 45 ~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~----~~~~ 114 (242)
T 3l8d_A 45 PFFEQYV--KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGE--GPDLSFIKGDLSSL----PFEN 114 (242)
T ss_dssp HHHHHHS--CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTC--BTTEEEEECBTTBC----SSCT
T ss_pred HHHHHHc--CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcc--cCCceEEEcchhcC----CCCC
Confidence 3444444 47889999999999999999998 7799999999999999998853 46799999998653 4578
Q ss_pred CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHH
Q 008457 145 SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFL 224 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 224 (564)
++||+|++..+++|++ ++..+++++.++|+|||.+++.++............ . . .....+...++++++
T Consensus 115 ~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~--~-----~--~~~~~~~~~~~~~~~ 183 (242)
T 3l8d_A 115 EQFEAIMAINSLEWTE--EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYP--R-----L--YGKDVVCNTMMPWEF 183 (242)
T ss_dssp TCEEEEEEESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGG--G-----G--GTCCCSSCCCCHHHH
T ss_pred CCccEEEEcChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhh--h-----h--ccccccccCCCHHHH
Confidence 8999999999999994 778999999999999999999987654432211110 0 0 011223345799999
Q ss_pred HHHHHhCCCcEEEeeeee
Q 008457 225 TSLFKENGFDVEELGLCC 242 (564)
Q Consensus 225 ~~~l~~aGf~~~~~~~~~ 242 (564)
.++++++||+++.....+
T Consensus 184 ~~~l~~~Gf~~~~~~~~~ 201 (242)
T 3l8d_A 184 EQLVKEQGFKVVDGIGVY 201 (242)
T ss_dssp HHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHcCCEEEEeeccc
Confidence 999999999998866443
No 22
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.77 E-value=3.5e-18 Score=161.63 Aligned_cols=198 Identities=13% Similarity=0.124 Sum_probs=130.6
Q ss_pred hhHHHHHHHHHhHhHHHHHHhhccccccccchhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChH
Q 008457 31 PFWRDKYEREAKKYWDLFYKRHQDRFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPR 110 (564)
Q Consensus 31 ~~~~~~y~~~a~~ywd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~ 110 (564)
+...+.|+..+..|.+.+. ... +..........+.+.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~ 85 (227)
T 3e8s_A 11 DALLDSWHQNAQAWIDAVR-HGA--IESRRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRT 85 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTC--CHHHHHTHHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHH
T ss_pred HHHHHHHHhhHHHHHHHhc-ccc--cccccccccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHH
Confidence 4456677777665544322 111 11111122233444444467799999999999999999888 779999999999
Q ss_pred HHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCc
Q 008457 111 AVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGD 190 (564)
Q Consensus 111 ~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~ 190 (564)
+++.|+++ .++.+...|+.........+.++||+|++..+++ . .++..++++++++|||||++++.++....
T Consensus 86 ~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 86 LVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H--QDIIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp HHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S--SCCHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred HHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECchhh-h--hhHHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 99999987 3567777777543211122445699999999999 4 47789999999999999999999887644
Q ss_pred hhhhhhcccc-cccccceeecCCCceeeccCHHHHHHHHHhCCCcEEEeeee
Q 008457 191 LAQERLTGKD-QKISENFYVRGDGTRAFYFSNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 191 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
.....+.... ......+.........++++.+++.++|+++||+++.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 209 (227)
T 3e8s_A 158 VADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQEP 209 (227)
T ss_dssp TCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEECC
T ss_pred cCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEecC
Confidence 3221111000 00000000000123445679999999999999999887653
No 23
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.77 E-value=1.9e-18 Score=166.67 Aligned_cols=168 Identities=17% Similarity=0.177 Sum_probs=121.0
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPS 145 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 145 (564)
.+.+.+...++.+|||+|||+|.++..+++.++. +|+|+|+|+.+++.|+++.. ..++.+.++|+... +++++
T Consensus 35 ~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~----~~~~~ 107 (253)
T 3g5l_A 35 ELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDI----AIEPD 107 (253)
T ss_dssp HHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGC----CCCTT
T ss_pred HHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhC----CCCCC
Confidence 3445555568899999999999999999998432 89999999999999998875 56899999998643 45788
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhh--hh--c--------ccccccccce---eec
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQE--RL--T--------GKDQKISENF---YVR 210 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~--~~--~--------~~~~~~~~~~---~~~ 210 (564)
+||+|++..+++|+ .++..++++++++|||||.+++....+...... .+ . .......... ...
T Consensus 108 ~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (253)
T 3g5l_A 108 AYNVVLSSLALHYI--ASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFL 185 (253)
T ss_dssp CEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEET
T ss_pred CeEEEEEchhhhhh--hhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeec
Confidence 99999999999999 478899999999999999999986543110000 00 0 0000000000 000
Q ss_pred CCCceeeccCHHHHHHHHHhCCCcEEEeeeee
Q 008457 211 GDGTRAFYFSNDFLTSLFKENGFDVEELGLCC 242 (564)
Q Consensus 211 ~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 242 (564)
......+.++.+++.++|+++||+++.+....
T Consensus 186 ~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~ 217 (253)
T 3g5l_A 186 GEDVQKYHRTVTTYIQTLLKNGFQINSVIEPE 217 (253)
T ss_dssp TEEEEEECCCHHHHHHHHHHTTEEEEEEECCC
T ss_pred cccCccEecCHHHHHHHHHHcCCeeeeeecCC
Confidence 01122334599999999999999998876543
No 24
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.77 E-value=7.1e-19 Score=172.84 Aligned_cols=161 Identities=17% Similarity=0.224 Sum_probs=118.8
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ .+++++++|+.... ++++++||+|+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~v~ 141 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA---SHLETPVDLIL 141 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG---GGCSSCEEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh---hhcCCCceEEE
Confidence 34789999999999999999988 7899999999999999998865433 57899999986532 24678999999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhc-ccccccccceeec--CCCceeeccCHHHHHHHH
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLT-GKDQKISENFYVR--GDGTRAFYFSNDFLTSLF 228 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l 228 (564)
+..+++|++ ++..+++++.++|||||.+++.+++.......... .....+....... ....+..+++.+++.+++
T Consensus 142 ~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 219 (285)
T 4htf_A 142 FHAVLEWVA--DPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWL 219 (285)
T ss_dssp EESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHH
T ss_pred ECchhhccc--CHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHH
Confidence 999999995 67899999999999999999988765432111110 0000111111000 111223467999999999
Q ss_pred HhCCCcEEEeeee
Q 008457 229 KENGFDVEELGLC 241 (564)
Q Consensus 229 ~~aGf~~~~~~~~ 241 (564)
+++||+++.....
T Consensus 220 ~~aGf~v~~~~~~ 232 (285)
T 4htf_A 220 EEAGWQIMGKTGV 232 (285)
T ss_dssp HHTTCEEEEEEEE
T ss_pred HHCCCceeeeeeE
Confidence 9999999876543
No 25
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.76 E-value=3.8e-18 Score=165.57 Aligned_cols=155 Identities=16% Similarity=0.254 Sum_probs=114.0
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ++.++++|+... ++ +++||+|++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~----~~-~~~fD~v~~~ 117 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNP----DAVLHHGDMRDF----SL-GRRFSAVTCM 117 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTC----CC-SCCEEEEEEC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCC----CCEEEECChHHC----Cc-cCCcCEEEEc
Confidence 46789999999999999999888 5689999999999999998754 689999998653 22 6899999999
Q ss_pred c-cccCCC-hhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhccc------c---------------cccccceeec
Q 008457 154 F-VLSAVS-PEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGK------D---------------QKISENFYVR 210 (564)
Q Consensus 154 ~-vl~~~~-~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~------~---------------~~~~~~~~~~ 210 (564)
. +++|++ ++++..+++++.++|||||.+++.++..+.......... . ..+...++..
T Consensus 118 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (263)
T 3pfg_A 118 FSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVA 197 (263)
T ss_dssp TTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEe
Confidence 8 999996 467889999999999999999997654333111100000 0 0000011110
Q ss_pred -CC--------CceeeccCHHHHHHHHHhCCCcEEEee
Q 008457 211 -GD--------GTRAFYFSNDFLTSLFKENGFDVEELG 239 (564)
Q Consensus 211 -~~--------~~~~~~~~~~~l~~~l~~aGf~~~~~~ 239 (564)
.+ ..+..+++.+++.++|+++||+++.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~ 235 (263)
T 3pfg_A 198 GPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMP 235 (263)
T ss_dssp ETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEES
T ss_pred cCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEee
Confidence 01 112346799999999999999988763
No 26
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.76 E-value=6.7e-18 Score=163.90 Aligned_cols=186 Identities=15% Similarity=0.276 Sum_probs=129.4
Q ss_pred HhHhHHHHHHhhccccccc--cchhHHHHhhhc--cCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHH
Q 008457 41 AKKYWDLFYKRHQDRFFKD--RHYLDKEWGRYF--SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVM 116 (564)
Q Consensus 41 a~~ywd~~~~~~~~~~~~~--~~~~~~~~~~~l--~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~ 116 (564)
...||+.||......+... ..+....+..++ ...++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+++.|+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~ 96 (265)
T 2i62_A 18 PRDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCLGAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQ 96 (265)
T ss_dssp HHHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhCcCCcchhHHHHHHhhHHHHHHHhcccccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHH
Confidence 4569999986654433211 111111222222 235678999999999999998887742 48999999999999998
Q ss_pred hcccccCC------------------------------Ce-eEEEecCCcccccCCCCCCceeEEEEcccccCCCh--hH
Q 008457 117 THKDFTET------------------------------RV-STFVCDLISDDLSRQISPSSIDIVTMVFVLSAVSP--EK 163 (564)
Q Consensus 117 ~~~~~~~~------------------------------~i-~~~~~d~~~~~~~~~~~~~~fD~V~~~~vl~~~~~--~~ 163 (564)
++....+. ++ .+.++|+.......+...++||+|++..+++|+++ .+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 176 (265)
T 2i62_A 97 KWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPA 176 (265)
T ss_dssp HHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHH
T ss_pred HHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHH
Confidence 87653221 27 88999987543211222389999999999995542 48
Q ss_pred HHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCc-eeeccCHHHHHHHHHhCCCcEEEeeeee
Q 008457 164 MSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGT-RAFYFSNDFLTSLFKENGFDVEELGLCC 242 (564)
Q Consensus 164 ~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 242 (564)
+..+++++.++|||||.+++.+..... ++...... ..+.++.+++.++|+++||+++......
T Consensus 177 ~~~~l~~~~~~LkpgG~li~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 177 YRTALRNLGSLLKPGGFLVMVDALKSS----------------YYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEEESSCC----------------EEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHHHhhCCCCcEEEEEecCCCc----------------eEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 899999999999999999998743321 11121221 2335789999999999999998877654
Q ss_pred c
Q 008457 243 K 243 (564)
Q Consensus 243 ~ 243 (564)
.
T Consensus 241 ~ 241 (265)
T 2i62_A 241 Q 241 (265)
T ss_dssp C
T ss_pred c
Confidence 3
No 27
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.76 E-value=6.9e-18 Score=158.90 Aligned_cols=153 Identities=20% Similarity=0.220 Sum_probs=122.8
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~ 142 (564)
..+.+.+...++.+|||+|||+|.++..+++.+ |..+|+|+|+|+.+++.|+++....+ .++.+.++|+... ++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~~ 102 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKI----PL 102 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBC----SS
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccC----CC
Confidence 344455555788999999999999999999985 67899999999999999998865433 4799999998643 45
Q ss_pred CCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHH
Q 008457 143 SPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSND 222 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (564)
++++||+|++..+++|++ ++..+++++.++|||||.+++.++...... .......+++.+
T Consensus 103 ~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~------------------~~~~~~~~~~~~ 162 (219)
T 3dh0_A 103 PDNTVDFIFMAFTFHELS--EPLKFLEELKRVAKPFAYLAIIDWKKEERD------------------KGPPPEEVYSEW 162 (219)
T ss_dssp CSSCEEEEEEESCGGGCS--SHHHHHHHHHHHEEEEEEEEEEEECSSCCS------------------SSCCGGGSCCHH
T ss_pred CCCCeeEEEeehhhhhcC--CHHHHHHHHHHHhCCCeEEEEEEecccccc------------------cCCchhcccCHH
Confidence 778999999999999995 778999999999999999999876654320 011122356899
Q ss_pred HHHHHHHhCCCcEEEeeee
Q 008457 223 FLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 223 ~l~~~l~~aGf~~~~~~~~ 241 (564)
++.++++++||+++.....
T Consensus 163 ~~~~~l~~~Gf~~~~~~~~ 181 (219)
T 3dh0_A 163 EVGLILEDAGIRVGRVVEV 181 (219)
T ss_dssp HHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEEee
Confidence 9999999999998876443
No 28
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.76 E-value=1.5e-17 Score=153.92 Aligned_cols=149 Identities=19% Similarity=0.182 Sum_probs=116.0
Q ss_pred HhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCC
Q 008457 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPS 145 (564)
Q Consensus 67 ~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~ 145 (564)
+.+.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+ .++.+.++|+... ++ ++
T Consensus 24 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~~-~~ 96 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNL----TF-DR 96 (199)
T ss_dssp HHHHTTTSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGC----CC-CC
T ss_pred HHHHhhccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhC----CC-CC
Confidence 334444567789999999999999999988 6799999999999999998765433 3789999998643 33 67
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHH
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLT 225 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 225 (564)
+||+|++..+++|++++++..+++++.++|||||.+++.++....... ......+.++.+++.
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~ 159 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYP-----------------CTVGFPFAFKEGELR 159 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC-----------------CCSCCSCCBCTTHHH
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcC-----------------CCCCCCCccCHHHHH
Confidence 899999999999998788999999999999999998886554322100 011122356899999
Q ss_pred HHHHhCCCcEEEeeee
Q 008457 226 SLFKENGFDVEELGLC 241 (564)
Q Consensus 226 ~~l~~aGf~~~~~~~~ 241 (564)
++|++ |+++.....
T Consensus 160 ~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 160 RYYEG--WERVKYNED 173 (199)
T ss_dssp HHTTT--SEEEEEECC
T ss_pred HHhcC--CeEEEeccc
Confidence 99976 988876543
No 29
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=1.8e-17 Score=154.79 Aligned_cols=182 Identities=16% Similarity=0.175 Sum_probs=131.3
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||+|||+|.++..++.. ++.+|+|+|+|+.+++.|+++....+.++.+.++|+... ++++++||+|++.
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~v~~~ 96 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKL----PFKDESMSFVYSY 96 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSC----CSCTTCEEEEEEC
T ss_pred CCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhC----CCCCCceeEEEEc
Confidence 56889999999999985444433 377999999999999999988655556789999998653 4567899999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeec---CCCceeeccCHHHHHHHHHh
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVR---GDGTRAFYFSNDFLTSLFKE 230 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~ 230 (564)
.+++|++.+++..+++++.++|||||.+++.++...+.... ....+....+.. .......+++.+++.++|++
T Consensus 97 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 172 (209)
T 2p8j_A 97 GTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYN----KGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKD 172 (209)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTT----CSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTT
T ss_pred ChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhcc----chhhhccccceeccCCCceeEEecCHHHHHHHHhh
Confidence 99999987889999999999999999999998776442211 001111111211 11223357899999999999
Q ss_pred CCCcEEEeeeeeccccccccccccceeEEEEEEEecCC
Q 008457 231 NGFDVEELGLCCKQVENRARELVMNRRWVQAVFCSSGG 268 (564)
Q Consensus 231 aGf~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 268 (564)
+||...+....... ..+....+.|....+.+.+.
T Consensus 173 ~g~~~~~~~~~~~~----~~g~~~~~~f~~~~~~~~~~ 206 (209)
T 2p8j_A 173 MKVLFKEDRVVERI----NDGLKIKQGYVDYIAEKFSK 206 (209)
T ss_dssp SEEEEEEEEEEEEE----ETTEEEEEEEEEEEEECCCC
T ss_pred cCceeeeeeeeehh----hcCCcccceeeeeehhhhhh
Confidence 99987765433321 22223346677777777543
No 30
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.75 E-value=9.3e-19 Score=171.15 Aligned_cols=167 Identities=22% Similarity=0.240 Sum_probs=121.9
Q ss_pred hhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccC
Q 008457 62 YLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSR 140 (564)
Q Consensus 62 ~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~ 140 (564)
.+...+.......++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.|+++....+ .++.+.+.|+...
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~---- 99 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL---- 99 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC----
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC----
Confidence 33344444444478899999999999999999999888999999999999999998865433 4799999998643
Q ss_pred CCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCch-------hhhhhcccccccccceeecCCC
Q 008457 141 QISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDL-------AQERLTGKDQKISENFYVRGDG 213 (564)
Q Consensus 141 ~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 213 (564)
++++++||+|++..+++|++ ++..+++++.++|||||.+++.+...... ......... .. ....
T Consensus 100 ~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~ 170 (276)
T 3mgg_A 100 PFEDSSFDHIFVCFVLEHLQ--SPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCL---IR----VQAY 170 (276)
T ss_dssp CSCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHH---HH----HHHH
T ss_pred CCCCCCeeEEEEechhhhcC--CHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHH---HH----HHHh
Confidence 45788999999999999995 66799999999999999999987543211 000000000 00 0000
Q ss_pred ceeeccCHHHHHHHHHhCCCcEEEeeee
Q 008457 214 TRAFYFSNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 214 ~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
.....++..++..+|+++||+++.+...
T Consensus 171 ~~~~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 171 MKGNSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp TTCCTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred cCCCcchHHHHHHHHHHCCCCeEEEeeE
Confidence 0011245688999999999998876544
No 31
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.75 E-value=1.3e-17 Score=159.81 Aligned_cols=159 Identities=17% Similarity=0.234 Sum_probs=116.9
Q ss_pred CCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEcc
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMVF 154 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~~ 154 (564)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+.++.+.++|+... +++ ++||+|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~-~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL----NIN-RKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC----CCS-CCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccC----Ccc-CCceEEEEcC
Confidence 7889999999999999999888 67899999999999999988754445789999988643 234 7899999998
Q ss_pred -cccCCC-hhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcc-------------ccc-----ccc--cceeecCC
Q 008457 155 -VLSAVS-PEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTG-------------KDQ-----KIS--ENFYVRGD 212 (564)
Q Consensus 155 -vl~~~~-~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~-------------~~~-----~~~--~~~~~~~~ 212 (564)
+++|++ ++++..+++++.++|||||.+++..+........ +.. +.. .+. ..++...+
T Consensus 110 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (246)
T 1y8c_A 110 DSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQV-LGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDG 188 (246)
T ss_dssp TGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTT-TTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECS
T ss_pred ccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhh-cCcceEEecCCcEEEEEecccCCceEEEEEEEEEecC
Confidence 999994 4688999999999999999999976553221100 000 000 000 00000011
Q ss_pred C--------ceeeccCHHHHHHHHHhCCCcEEEeeee
Q 008457 213 G--------TRAFYFSNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 213 ~--------~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
+ .+..+++.+++.++|+++||+++++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 189 EFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp SSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred CcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 1 1234679999999999999999887544
No 32
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.75 E-value=1.2e-17 Score=164.95 Aligned_cols=161 Identities=16% Similarity=0.085 Sum_probs=121.1
Q ss_pred HHHhhhc----cCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccc
Q 008457 65 KEWGRYF----SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDL 138 (564)
Q Consensus 65 ~~~~~~l----~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~ 138 (564)
..+.+.+ ...++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|+++....+ .++++.++|+...
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-- 144 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-- 144 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC--
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC--
Confidence 3444455 55788999999999999999999875 5699999999999999998764332 5799999998643
Q ss_pred cCCCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeec
Q 008457 139 SRQISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFY 218 (564)
Q Consensus 139 ~~~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (564)
++++++||+|++..+++|++ ++..+++++.++|||||.+++.++........... ..+...+ ....+
T Consensus 145 --~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~ 211 (297)
T 2o57_A 145 --PCEDNSYDFIWSQDAFLHSP--DKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSI---QPILDRI------KLHDM 211 (297)
T ss_dssp --SSCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGG---HHHHHHH------TCSSC
T ss_pred --CCCCCCEeEEEecchhhhcC--CHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHH---HHHHHHh------cCCCC
Confidence 56788999999999999996 58899999999999999999987654321111000 0000000 01123
Q ss_pred cCHHHHHHHHHhCCCcEEEeeee
Q 008457 219 FSNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 219 ~~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
.+.+++.++++++||+++.....
T Consensus 212 ~~~~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 212 GSLGLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp CCHHHHHHHHHHTTEEEEEEEEC
T ss_pred CCHHHHHHHHHHCCCeEEEEEEC
Confidence 58999999999999998876543
No 33
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.75 E-value=1.1e-17 Score=165.50 Aligned_cols=171 Identities=16% Similarity=0.160 Sum_probs=123.4
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC----CCeeEEEecCCcccccC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE----TRVSTFVCDLISDDLSR 140 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~----~~i~~~~~d~~~~~~~~ 140 (564)
..+.+.+. .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ .+++++++|+...
T Consensus 73 ~~~~~~~~-~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~---- 145 (299)
T 3g2m_A 73 REFATRTG-PVSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF---- 145 (299)
T ss_dssp HHHHHHHC-CCCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC----
T ss_pred HHHHHhhC-CCCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC----
Confidence 44444554 34459999999999999999988 6789999999999999999876544 6799999999753
Q ss_pred CCCCCceeEEEEc-ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhccc---------cccccc-----
Q 008457 141 QISPSSIDIVTMV-FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGK---------DQKISE----- 205 (564)
Q Consensus 141 ~~~~~~fD~V~~~-~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~---------~~~~~~----- 205 (564)
++ +++||+|++. .+++|+++++...+|+++.++|||||.|++.+++............ ...+..
T Consensus 146 ~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 224 (299)
T 3g2m_A 146 AL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPA 224 (299)
T ss_dssp CC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEE
T ss_pred Cc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEecc
Confidence 22 6789999864 6788888778899999999999999999998877654311100000 000000
Q ss_pred ------ceeecC--------CCceeeccCHHHHHHHHHhCCCcEEEeeeeec
Q 008457 206 ------NFYVRG--------DGTRAFYFSNDFLTSLFKENGFDVEELGLCCK 243 (564)
Q Consensus 206 ------~~~~~~--------~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~ 243 (564)
.++... ...+.++++.+++.++|+++||+++.+.....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~ 276 (299)
T 3g2m_A 225 EEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFAS 276 (299)
T ss_dssp EEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECT
T ss_pred ccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCC
Confidence 000000 01223368999999999999999998766543
No 34
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.74 E-value=3.8e-18 Score=165.26 Aligned_cols=163 Identities=17% Similarity=0.172 Sum_probs=122.0
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~ 143 (564)
..+.+.+...++.+|||||||+|.++..+++.. .+|+|+|+|+.|++.|+++....+ .++.+.++|+... +++
T Consensus 27 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l----~~~ 100 (260)
T 1vl5_A 27 AKLMQIAALKGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM----PFT 100 (260)
T ss_dssp HHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC----CSC
T ss_pred HHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC----CCC
Confidence 344455555788999999999999999999884 599999999999999998764333 4689999998643 567
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhh-hhhcccccccccceeecCCCceeeccCHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQ-ERLTGKDQKISENFYVRGDGTRAFYFSND 222 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (564)
+++||+|+++.+++|++ ++..+|+++.++|||||.+++.++..+.... ..+....... ....+..+++.+
T Consensus 101 ~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 171 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFP--NPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKE-------RDYSHHRAWKKS 171 (260)
T ss_dssp TTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHH-------HCTTCCCCCBHH
T ss_pred CCCEEEEEEhhhhHhcC--CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHh-------cCccccCCCCHH
Confidence 88999999999999995 7789999999999999999998655432211 1111111000 011223356899
Q ss_pred HHHHHHHhCCCcEEEeeeee
Q 008457 223 FLTSLFKENGFDVEELGLCC 242 (564)
Q Consensus 223 ~l~~~l~~aGf~~~~~~~~~ 242 (564)
++.++|+++||+++......
T Consensus 172 ~~~~~l~~aGf~~~~~~~~~ 191 (260)
T 1vl5_A 172 DWLKMLEEAGFELEELHCFH 191 (260)
T ss_dssp HHHHHHHHHTCEEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEEEee
Confidence 99999999999988765543
No 35
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.74 E-value=1e-17 Score=165.51 Aligned_cols=205 Identities=15% Similarity=0.205 Sum_probs=123.2
Q ss_pred hhHHHHHHHHHhHhHHHHHHhhccccccccchhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChH
Q 008457 31 PFWRDKYEREAKKYWDLFYKRHQDRFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPR 110 (564)
Q Consensus 31 ~~~~~~y~~~a~~ywd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~ 110 (564)
+.+.+.|+..+..||+............-..++...+.... ..++.+|||||||+|.++..+++.. ..+|+|+|+|+.
T Consensus 21 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~ 98 (298)
T 1ri5_A 21 EEIREHYNSIRERGRESRQRSKTINIRNANNFIKACLIRLY-TKRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEV 98 (298)
T ss_dssp --------------------CCSHHHHHHHHHHHHHHHHHH-CCTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHH
T ss_pred HHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHh-CCCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHH
Confidence 34566788887777654221100000001122222222222 2678999999999999999988873 459999999999
Q ss_pred HHHHHHhcccccC--CCeeEEEecCCcccccCCC-CCCceeEEEEcccccC--CChhHHHHHHHHHHhccCCCeEEEEEe
Q 008457 111 AVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQI-SPSSIDIVTMVFVLSA--VSPEKMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 111 ~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~-~~~~fD~V~~~~vl~~--~~~~~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
+++.|+++....+ .++.+.++|+... ++ ++++||+|++..++|| .+..++..+++++.++|||||.+++.+
T Consensus 99 ~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 99 SINDARVRARNMKRRFKVFFRAQDSYGR----HMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp HHHHHHHHHHTSCCSSEEEEEESCTTTS----CCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCccEEEEECCcccc----ccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999998865433 4689999998654 33 5789999999999988 556788999999999999999999988
Q ss_pred cCCCchhhh----hhcc-----------ccccccccee---ec--CCCceeeccCHHHHHHHHHhCCCcEEEeeee
Q 008457 186 YAIGDLAQE----RLTG-----------KDQKISENFY---VR--GDGTRAFYFSNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 186 ~~~~~~~~~----~~~~-----------~~~~~~~~~~---~~--~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
+........ .+.. ....+....+ .. ....+.++++.+++.++++++||+++.....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 175 PSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp ECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred CCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 664322110 0000 0000000001 00 1123345789999999999999999877543
No 36
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.74 E-value=2.3e-17 Score=162.34 Aligned_cols=161 Identities=17% Similarity=0.232 Sum_probs=111.8
Q ss_pred HHHhhhccC--CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCC------------------
Q 008457 65 KEWGRYFSG--AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTET------------------ 124 (564)
Q Consensus 65 ~~~~~~l~~--~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~------------------ 124 (564)
..+.+.+.. .++.+|||||||+|.++..++. .++.+|+|+|+|+.|++.|+++......
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSAC-SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGG-GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhc-cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 344444432 3778999999999995544433 2367999999999999999875432110
Q ss_pred -------------CeeEEEecCCc-cccc-CCCCCCceeEEEEcccccCCCh--hHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 125 -------------RVSTFVCDLIS-DDLS-RQISPSSIDIVTMVFVLSAVSP--EKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 125 -------------~i~~~~~d~~~-~~~~-~~~~~~~fD~V~~~~vl~~~~~--~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
.++++.+|+.. ..+. ..+++++||+|+++.+++|++. .++..+|++++++|||||.|++....
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 13466668764 2111 1245678999999999999653 48999999999999999999997422
Q ss_pred CCchhhhhhcccccccccceeecCCCc-eeeccCHHHHHHHHHhCCCcEEEeeeee
Q 008457 188 IGDLAQERLTGKDQKISENFYVRGDGT-RAFYFSNDFLTSLFKENGFDVEELGLCC 242 (564)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 242 (564)
.. .++...... ...+++.+++.++|+++||+++......
T Consensus 218 ~~----------------~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 218 EE----------------SWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp SC----------------CEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred Cc----------------ceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 11 122222222 1336799999999999999998876654
No 37
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.74 E-value=1e-17 Score=165.21 Aligned_cols=145 Identities=17% Similarity=0.255 Sum_probs=107.9
Q ss_pred HHHHHhHhHHHHHHhhccccccccchhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHH
Q 008457 37 YEREAKKYWDLFYKRHQDRFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVM 116 (564)
Q Consensus 37 y~~~a~~ywd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~ 116 (564)
++..+.++|+.++...... ...+...+.+.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~ 96 (293)
T 3thr_A 23 ADGEAARVWQLYIGDTRSR----TAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYAL 96 (293)
T ss_dssp TTCHHHHHHHHHHTCCSCB----CHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred cCchHHHHHHHHHhcCcch----HHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHH
Confidence 4455667888776433221 2223334444454467899999999999999999998 669999999999999998
Q ss_pred hcccc-----cCCCeeEEEecCCcccccCCCCCCceeEEEEc-ccccCCCh-----hHHHHHHHHHHhccCCCeEEEEEe
Q 008457 117 THKDF-----TETRVSTFVCDLISDDLSRQISPSSIDIVTMV-FVLSAVSP-----EKMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 117 ~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~-~vl~~~~~-----~~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
++... ...++.+..+|+....... +++++||+|+|. .+++|++. +++..++++++++|||||++++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 97 KERWNRRKEPAFDKWVIEEANWLTLDKDV-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp HHHHHTTTSHHHHTCEEEECCGGGHHHHS-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HhhhhcccccccceeeEeecChhhCcccc-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 76421 1245778888875432000 467899999998 89999975 569999999999999999999987
Q ss_pred cCC
Q 008457 186 YAI 188 (564)
Q Consensus 186 ~~~ 188 (564)
++.
T Consensus 176 ~~~ 178 (293)
T 3thr_A 176 RNY 178 (293)
T ss_dssp ECH
T ss_pred CCH
Confidence 654
No 38
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.74 E-value=1.6e-17 Score=156.28 Aligned_cols=159 Identities=12% Similarity=0.164 Sum_probs=116.0
Q ss_pred hccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC------CCeeEEEecCCcccccCCCC
Q 008457 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE------TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 70 ~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~------~~i~~~~~d~~~~~~~~~~~ 143 (564)
.+...++.+|||||||+|.++..+++.++..+|+|+|+|+.+++.|+++....+ .++++.++|+... +.+
T Consensus 24 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~ 99 (217)
T 3jwh_A 24 ALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ----DKR 99 (217)
T ss_dssp HHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC----CGG
T ss_pred HHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc----ccc
Confidence 333367889999999999999999998777899999999999999998865332 2799999998533 335
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDF 223 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (564)
.++||+|++..+++|++..+...+++++.++|||||.+++...... ...+.. +... ......+.+.++.++
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~---~~~~~~----~~~~--~~~~~~~~~~~~~~~ 170 (217)
T 3jwh_A 100 FHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEY---NVKFAN----LPAG--KLRHKDHRFEWTRSQ 170 (217)
T ss_dssp GCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHH---HHHTC-----------------CCSCBCHHH
T ss_pred CCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCccc---chhhcc----cccc--cccccccccccCHHH
Confidence 5799999999999999877779999999999999997776543211 011100 0000 001123344578999
Q ss_pred HH----HHHHhCCCcEEEeeee
Q 008457 224 LT----SLFKENGFDVEELGLC 241 (564)
Q Consensus 224 l~----~~l~~aGf~~~~~~~~ 241 (564)
+. ++++++||+++.....
T Consensus 171 l~~~~~~~~~~~Gf~v~~~~~g 192 (217)
T 3jwh_A 171 FQNWANKITERFAYNVQFQPIG 192 (217)
T ss_dssp HHHHHHHHHHHSSEEEEECCCS
T ss_pred HHHHHHHHHHHcCceEEEEecC
Confidence 98 8999999988765443
No 39
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.73 E-value=3.3e-18 Score=165.70 Aligned_cols=162 Identities=15% Similarity=0.156 Sum_probs=120.2
Q ss_pred chhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccC
Q 008457 61 HYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSR 140 (564)
Q Consensus 61 ~~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~ 140 (564)
..+...+.+.+...++.+|||||||+|.++..+++ ++.+|+|+|+|+.+++.|+++. ++.+.++|+...
T Consensus 20 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~~~~---- 88 (261)
T 3ege_A 20 IRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP-----QVEWFTGYAENL---- 88 (261)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT-----TEEEECCCTTSC----
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc-----CCEEEECchhhC----
Confidence 34555666667667899999999999999999987 4789999999999999887664 789999998643
Q ss_pred CCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccC
Q 008457 141 QISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFS 220 (564)
Q Consensus 141 ~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (564)
++++++||+|++..+++|+ .++..++++++++|| ||.+++.++................. ....+..+.+
T Consensus 89 ~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 158 (261)
T 3ege_A 89 ALPDKSVDGVISILAIHHF--SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFL-------WEDALRFLPL 158 (261)
T ss_dssp CSCTTCBSEEEEESCGGGC--SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHH-------HHHHHTSCCH
T ss_pred CCCCCCEeEEEEcchHhhc--cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHH-------hhhhhhhCCC
Confidence 4678899999999999999 478899999999999 99988887764321110000000000 0111123457
Q ss_pred HHHHHHHHHhCCCcEEEeeeeecc
Q 008457 221 NDFLTSLFKENGFDVEELGLCCKQ 244 (564)
Q Consensus 221 ~~~l~~~l~~aGf~~~~~~~~~~~ 244 (564)
.+++. +++++||..+.......+
T Consensus 159 ~~~~~-~l~~aGF~~v~~~~~~~p 181 (261)
T 3ege_A 159 DEQIN-LLQENTKRRVEAIPFLLP 181 (261)
T ss_dssp HHHHH-HHHHHHCSEEEEEECCEE
T ss_pred HHHHH-HHHHcCCCceeEEEecCC
Confidence 78888 999999998876555433
No 40
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.73 E-value=8.2e-18 Score=160.69 Aligned_cols=162 Identities=16% Similarity=0.156 Sum_probs=122.9
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~ 143 (564)
..+.+.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ .++.+.++|+... +++
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~~ 84 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL----PFP 84 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC----CSC
T ss_pred chHHHHhCcCCCCEEEEEccCcCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC----CCC
Confidence 34445566688999999999999999999888 4589999999999999998764333 4789999998542 467
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhh-hhhcccccccccceeecCCCceeeccCHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQ-ERLTGKDQKISENFYVRGDGTRAFYFSND 222 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (564)
+++||+|++..+++|++ ++..+++++.++|||||.+++.+........ ..+....... ....+...++.+
T Consensus 85 ~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 155 (239)
T 1xxl_A 85 DDSFDIITCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRL-------RDPSHVRESSLS 155 (239)
T ss_dssp TTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHH-------HCTTCCCCCBHH
T ss_pred CCcEEEEEECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHh-------ccccccCCCCHH
Confidence 88999999999999995 7889999999999999999998765433211 1111110000 112233456899
Q ss_pred HHHHHHHhCCCcEEEeeee
Q 008457 223 FLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 223 ~l~~~l~~aGf~~~~~~~~ 241 (564)
++.++|+++||+++.....
T Consensus 156 ~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 156 EWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp HHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHCCCcEEEEEee
Confidence 9999999999998876554
No 41
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.73 E-value=4.1e-17 Score=156.11 Aligned_cols=166 Identities=16% Similarity=0.196 Sum_probs=119.7
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCc-EEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDV-FVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~-~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 143 (564)
..+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.|+++... .++.+.++|+... +++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~----~~~ 104 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD--TGITYERADLDKL----HLP 104 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGC----CCC
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhhc----cCC
Confidence 34555666578899999999999999999988 45 999999999999999988653 4789999998643 356
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhh--hc-c-ccc---cccccee---e----
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQER--LT-G-KDQ---KISENFY---V---- 209 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~--~~-~-~~~---~~~~~~~---~---- 209 (564)
+++||+|++..+++|++ ++..+++++.++|||||.+++.++.+....... +. . ... .+...+. .
T Consensus 105 ~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (243)
T 3bkw_A 105 QDSFDLAYSSLALHYVE--DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDW 182 (243)
T ss_dssp TTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTH
T ss_pred CCCceEEEEeccccccc--hHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeee
Confidence 78999999999999995 688999999999999999999875421100000 00 0 000 0000000 0
Q ss_pred cCCCceeeccCHHHHHHHHHhCCCcEEEeee
Q 008457 210 RGDGTRAFYFSNDFLTSLFKENGFDVEELGL 240 (564)
Q Consensus 210 ~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 240 (564)
.....+.++++.+++.++|+++||+++.+..
T Consensus 183 ~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 183 LAKGVVKHHRTVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp HHHSCCEEECCHHHHHHHHHHTTCEEEEEEE
T ss_pred ccCceEEEeccHHHHHHHHHHcCCEeeeecc
Confidence 0012233456899999999999999987654
No 42
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.73 E-value=2.7e-17 Score=154.91 Aligned_cols=159 Identities=15% Similarity=0.229 Sum_probs=116.0
Q ss_pred hccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC------CCeeEEEecCCcccccCCCC
Q 008457 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE------TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 70 ~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~------~~i~~~~~d~~~~~~~~~~~ 143 (564)
.+...++.+|||||||+|.++..+++.++..+|+|+|+|+.+++.|+++....+ .++++.++|+... +++
T Consensus 24 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~ 99 (219)
T 3jwg_A 24 VLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR----DKR 99 (219)
T ss_dssp HHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC----CGG
T ss_pred HHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc----ccc
Confidence 333367889999999999999999988766899999999999999998865332 2799999998533 335
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDF 223 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (564)
.++||+|++..+++|++..+...+++++.++|||||.++......... .+ ..+... ......+.+.++.++
T Consensus 100 ~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~---~~----~~~~~~--~~~~~~~~~~~~~~~ 170 (219)
T 3jwg_A 100 FSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNF---HY----GNLFEG--NLRHRDHRFEWTRKE 170 (219)
T ss_dssp GTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGG---CC----CCT-------GGGCCTTSBCHHH
T ss_pred cCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhh---hh----cccCcc--cccccCceeeecHHH
Confidence 689999999999999987677899999999999999666543321110 00 000000 001123334578999
Q ss_pred HH----HHHHhCCCcEEEeeee
Q 008457 224 LT----SLFKENGFDVEELGLC 241 (564)
Q Consensus 224 l~----~~l~~aGf~~~~~~~~ 241 (564)
+. ++++++||++......
T Consensus 171 l~~~~~~l~~~~Gf~v~~~~~g 192 (219)
T 3jwg_A 171 FQTWAVKVAEKYGYSVRFLQIG 192 (219)
T ss_dssp HHHHHHHHHHHHTEEEEEEEES
T ss_pred HHHHHHHHHHHCCcEEEEEecC
Confidence 98 8899999988765443
No 43
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.73 E-value=3e-17 Score=161.70 Aligned_cols=156 Identities=17% Similarity=0.173 Sum_probs=108.6
Q ss_pred CCCCeEEEEcCCccccHHH----HHHhCCCcEE--EEEeCChHHHHHHHhccccc--CCCeeEEEecCCccccc----CC
Q 008457 74 AGRKDVLEVGCGAGNTIFP----LIAAYPDVFV--YACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLS----RQ 141 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~----l~~~~~~~~v--~~iD~s~~~l~~a~~~~~~~--~~~i~~~~~d~~~~~~~----~~ 141 (564)
.++.+|||||||+|.++.. ++..+++..| +|+|+|+.|++.|+++.... ..++.+...+...+.+. .+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 5678999999999976643 3444567754 99999999999999886432 24555544333322222 13
Q ss_pred CCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCH
Q 008457 142 ISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSN 221 (564)
Q Consensus 142 ~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (564)
+++++||+|++..++||++ ++..+|++++++|||||.+++............+......+. ...+..+++.
T Consensus 131 ~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 201 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFP-------QDDLCQYITS 201 (292)
T ss_dssp TCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSC-------CCTTCCCCCH
T ss_pred cCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhcc-------CCCcccCCCH
Confidence 5678999999999999995 788999999999999999999876543322111111111110 1112345789
Q ss_pred HHHHHHHHhCCCcEEEe
Q 008457 222 DFLTSLFKENGFDVEEL 238 (564)
Q Consensus 222 ~~l~~~l~~aGf~~~~~ 238 (564)
+++.++|+++||+++..
T Consensus 202 ~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 202 DDLTQMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHCCCceEEE
Confidence 99999999999988753
No 44
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.73 E-value=1.6e-17 Score=162.04 Aligned_cols=165 Identities=21% Similarity=0.194 Sum_probs=122.6
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~ 142 (564)
..+.+.+...++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|+++....+ .++.+.++|+... ++
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~ 125 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL----PF 125 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC----CS
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC----CC
Confidence 344455555788999999999999999999876 7899999999999999998765433 4699999998653 45
Q ss_pred CCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHH
Q 008457 143 SPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSND 222 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (564)
++++||+|++..+++|++ ++..+++++.++|||||.+++.++............... .++. ......+++.+
T Consensus 126 ~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~ 197 (273)
T 3bus_A 126 EDASFDAVWALESLHHMP--DRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVD----AFRA--GGGVLSLGGID 197 (273)
T ss_dssp CTTCEEEEEEESCTTTSS--CHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHH----HHHH--HHTCCCCCCHH
T ss_pred CCCCccEEEEechhhhCC--CHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHH----HHHh--hcCccCCCCHH
Confidence 788999999999999995 678999999999999999999876533211000000000 0000 00122356899
Q ss_pred HHHHHHHhCCCcEEEeeeee
Q 008457 223 FLTSLFKENGFDVEELGLCC 242 (564)
Q Consensus 223 ~l~~~l~~aGf~~~~~~~~~ 242 (564)
++.++++++||+++......
T Consensus 198 ~~~~~l~~aGf~~~~~~~~~ 217 (273)
T 3bus_A 198 EYESDVRQAELVVTSTVDIS 217 (273)
T ss_dssp HHHHHHHHTTCEEEEEEECH
T ss_pred HHHHHHHHcCCeEEEEEECc
Confidence 99999999999998765543
No 45
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=2.9e-17 Score=158.84 Aligned_cols=160 Identities=13% Similarity=0.071 Sum_probs=117.1
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 144 (564)
..+.+.+...++.+|||||||+|.++..+++.+|+.+|+|+|+|+.|++.++++ ..++.+.++|+... + ++
T Consensus 23 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~~----~-~~ 93 (259)
T 2p35_A 23 RDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR----LPNTNFGKADLATW----K-PA 93 (259)
T ss_dssp HHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----STTSEEEECCTTTC----C-CS
T ss_pred HHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CCCcEEEECChhhc----C-cc
Confidence 344555555778999999999999999999988888999999999999999887 24789999998642 3 56
Q ss_pred CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccc-c--ccccceeecCCCceeeccCH
Q 008457 145 SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKD-Q--KISENFYVRGDGTRAFYFSN 221 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~ 221 (564)
++||+|+++.+++|++ ++..++++++++|||||.+++.++.............. . .....+ .........+++.
T Consensus 94 ~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 170 (259)
T 2p35_A 94 QKADLLYANAVFQWVP--DHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAF-SGGGLRRKPLPPP 170 (259)
T ss_dssp SCEEEEEEESCGGGST--THHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC--------CCCCCH
T ss_pred CCcCEEEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHh-ccccccccCCCCH
Confidence 8899999999999994 78899999999999999999988654321111111000 0 000000 0000112346799
Q ss_pred HHHHHHHHhCCCcEE
Q 008457 222 DFLTSLFKENGFDVE 236 (564)
Q Consensus 222 ~~l~~~l~~aGf~~~ 236 (564)
+++.++|+++||++.
T Consensus 171 ~~~~~~l~~aGf~v~ 185 (259)
T 2p35_A 171 SDYFNALSPKSSRVD 185 (259)
T ss_dssp HHHHHHHGGGEEEEE
T ss_pred HHHHHHHHhcCCceE
Confidence 999999999999754
No 46
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=2.2e-17 Score=161.61 Aligned_cols=162 Identities=16% Similarity=0.178 Sum_probs=119.2
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPS 145 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 145 (564)
.+.+.+...++.+|||||||+|.++..+++ ++.+|+|+|+|+.|++.|+++. .++.+.++|+... ++ ++
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~----~~-~~ 116 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY----PHLHFDVADARNF----RV-DK 116 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTTC----CC-SS
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhhC----Cc-CC
Confidence 344455557889999999999999999988 4889999999999999998875 4688999998642 33 57
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhh--hhhcccccccccceeecCCCceeeccCHHH
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQ--ERLTGKDQKISENFYVRGDGTRAFYFSNDF 223 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (564)
+||+|++..+++|++ ++..++++++++|||||.+++..+....... ..+.......... + .....+..+++.++
T Consensus 117 ~fD~v~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 192 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVK--EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIH-N-PQALNPWYFPSIGE 192 (279)
T ss_dssp CEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCC-C-GGGGCCCCCCCHHH
T ss_pred CcCEEEEcchhhhCc--CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCc-c-ccCcCceeCCCHHH
Confidence 899999999999995 7889999999999999999998876543211 1111000000000 0 00111223568999
Q ss_pred HHHHHHhCCCcEEEeeeee
Q 008457 224 LTSLFKENGFDVEELGLCC 242 (564)
Q Consensus 224 l~~~l~~aGf~~~~~~~~~ 242 (564)
+.++|+++||+++......
T Consensus 193 ~~~~l~~aGf~~~~~~~~~ 211 (279)
T 3ccf_A 193 YVNILEKQGFDVTYAALFN 211 (279)
T ss_dssp HHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHcCCEEEEEEEec
Confidence 9999999999988765543
No 47
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.72 E-value=2.6e-17 Score=157.07 Aligned_cols=105 Identities=12% Similarity=0.210 Sum_probs=89.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE-
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (564)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++. .++.+.++|+... ++ +++||+|+|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~~----~~-~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL----PDATLHQGDMRDF----RL-GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC----TTCEEEECCTTTC----CC-SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC----CCCEEEECCHHHc----cc-CCCCcEEEEc
Confidence 577899999999999999999984 48999999999999999875 3588999998643 22 578999996
Q ss_pred cccccCCC-hhHHHHHHHHHHhccCCCeEEEEEecCCC
Q 008457 153 VFVLSAVS-PEKMSLVLQNIKKVLKPTGYVLFRDYAIG 189 (564)
Q Consensus 153 ~~vl~~~~-~~~~~~~l~~~~r~LkpgG~lii~~~~~~ 189 (564)
..+++|++ .+++..++++++++|||||.+++.++...
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 44999985 46888999999999999999999876554
No 48
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=3e-17 Score=157.42 Aligned_cols=162 Identities=18% Similarity=0.218 Sum_probs=116.8
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCC-CCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQIS-PSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~-~~~fD~V~~ 152 (564)
.++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.|+++.. ..++.++++|+.......++. ...||+|++
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT--AANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC--CTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc--ccCceEEECcccccccccccccccCccEEEE
Confidence 6788999999999999999999854 89999999999999998873 347999999997643321121 124899999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhc-ccccccccc-eeecCCCceeeccCHHHHHHHHHh
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLT-GKDQKISEN-FYVRGDGTRAFYFSNDFLTSLFKE 230 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~ 230 (564)
..++||++.+++..++++++++|||||++++.++.........-. ......... ......+.....++.+++.++|
T Consensus 131 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 208 (245)
T 3ggd_A 131 RTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF-- 208 (245)
T ss_dssp ESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--
T ss_pred cchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--
Confidence 999999988889999999999999999999988876542211100 000000000 0000112222346899999999
Q ss_pred CCCcEEEeeee
Q 008457 231 NGFDVEELGLC 241 (564)
Q Consensus 231 aGf~~~~~~~~ 241 (564)
+||+++.....
T Consensus 209 aGf~~~~~~~~ 219 (245)
T 3ggd_A 209 PDFEILSQGEG 219 (245)
T ss_dssp TTEEEEEEECC
T ss_pred CCCEEEecccc
Confidence 99999876543
No 49
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.72 E-value=2.1e-17 Score=162.40 Aligned_cols=162 Identities=16% Similarity=0.163 Sum_probs=120.2
Q ss_pred HhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCC
Q 008457 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 67 ~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~ 144 (564)
+.+.+...++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|+++....+ .++.+..+|+.. + +
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~----~- 127 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ--F----D- 127 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG--C----C-
T ss_pred HHHHcCCCCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh--C----C-
Confidence 3444555788999999999999999999654 5699999999999999998865433 478999998843 2 3
Q ss_pred CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhc---------ccccccccceeecCCCce
Q 008457 145 SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLT---------GKDQKISENFYVRGDGTR 215 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 215 (564)
++||+|++..+++|++.+++..+++++.++|||||.+++.++........... .....+....+ ..
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 202 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIF-----PG 202 (287)
T ss_dssp CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTS-----TT
T ss_pred CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeC-----CC
Confidence 78999999999999987788999999999999999999988765443221000 00000000000 01
Q ss_pred eeccCHHHHHHHHHhCCCcEEEeeee
Q 008457 216 AFYFSNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 216 ~~~~~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
..+.+.+++.++++++||+++.....
T Consensus 203 ~~~~s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 203 GRLPSIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp CCCCCHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCCCHHHHHHHHHhCCcEEEEEEeC
Confidence 12358999999999999999876543
No 50
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.72 E-value=4.3e-17 Score=157.99 Aligned_cols=152 Identities=19% Similarity=0.186 Sum_probs=113.8
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++......++.+.++|+... ++++++||+|++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~v~~ 110 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAI----PLPDESVHGVIV 110 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSC----CSCTTCEEEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccC----CCCCCCeeEEEE
Confidence 367899999999999999999887 68999999999999999988743446899999998543 457889999999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCC--ch---hhhhhcccccccccceeecCCCceeeccCHHHHHHH
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIG--DL---AQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSL 227 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 227 (564)
..++||++ ++..+++++.++|||||.+++. +... .. ....+........ +. ...+..+++.+++.++
T Consensus 111 ~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~ 182 (263)
T 2yqz_A 111 VHLWHLVP--DWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEG---FP--VERGLHAKRLKEVEEA 182 (263)
T ss_dssp ESCGGGCT--THHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHT---CC--CCCCHHHHHHHHHHHH
T ss_pred CCchhhcC--CHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhC---CC--cccccccCCHHHHHHH
Confidence 99999995 6889999999999999999987 2221 11 0011111000000 00 1112235689999999
Q ss_pred HHhCCCcEEEe
Q 008457 228 FKENGFDVEEL 238 (564)
Q Consensus 228 l~~aGf~~~~~ 238 (564)
++++||+++..
T Consensus 183 l~~~Gf~~~~~ 193 (263)
T 2yqz_A 183 LRRLGLKPRTR 193 (263)
T ss_dssp HHHTTCCCEEE
T ss_pred HHHcCCCcceE
Confidence 99999997654
No 51
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.72 E-value=6e-17 Score=157.43 Aligned_cols=156 Identities=13% Similarity=0.151 Sum_probs=117.6
Q ss_pred HHhhhcc-CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCC
Q 008457 66 EWGRYFS-GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 66 ~~~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~ 142 (564)
.+.+.+. ..++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|+++....+ .+++++++|+... ++
T Consensus 36 ~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~ 110 (267)
T 3kkz_A 36 KALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL----PF 110 (267)
T ss_dssp HHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC----CC
T ss_pred HHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC----CC
Confidence 3344443 467899999999999999999988 57799999999999999998865433 5699999999643 45
Q ss_pred CCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCch-hhhhhcccccccccceeecCCCceeeccCH
Q 008457 143 SPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDL-AQERLTGKDQKISENFYVRGDGTRAFYFSN 221 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (564)
++++||+|++..+++|+ ++..+++++.++|||||.+++.++..... ....... ++. .....+.+.
T Consensus 111 ~~~~fD~i~~~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~~ 176 (267)
T 3kkz_A 111 RNEELDLIWSEGAIYNI---GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEIND--------FWM---DAYPEIDTI 176 (267)
T ss_dssp CTTCEEEEEESSCGGGT---CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHH--------HHH---HHCTTCEEH
T ss_pred CCCCEEEEEEcCCceec---CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHH--------HHH---HhCCCCCCH
Confidence 67899999999999999 46789999999999999999987642110 0000000 000 001123478
Q ss_pred HHHHHHHHhCCCcEEEeee
Q 008457 222 DFLTSLFKENGFDVEELGL 240 (564)
Q Consensus 222 ~~l~~~l~~aGf~~~~~~~ 240 (564)
+++.++++++||+++....
T Consensus 177 ~~~~~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 177 PNQVAKIHKAGYLPVATFI 195 (267)
T ss_dssp HHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEEE
Confidence 9999999999999987644
No 52
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.71 E-value=2.1e-16 Score=152.20 Aligned_cols=108 Identities=17% Similarity=0.260 Sum_probs=91.2
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+.++.+.++|+... ++ .++||+|++
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~----~~-~~~fD~v~~ 111 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI----AF-KNEFDAVTM 111 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC----CC-CSCEEEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhc----cc-CCCccEEEE
Confidence 356789999999999999999987 77999999999999999988765556789999998653 22 368999999
Q ss_pred c-ccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 153 V-FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 153 ~-~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
. ..++|++.+++..+++++.++|+|||.+++..++
T Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 112 FFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp CSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 7 4567777778999999999999999999986543
No 53
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.71 E-value=3.6e-17 Score=157.88 Aligned_cols=158 Identities=16% Similarity=0.163 Sum_probs=119.8
Q ss_pred HHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCC
Q 008457 64 DKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQ 141 (564)
Q Consensus 64 ~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~ 141 (564)
...+.+.+...++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|+++....+ .++.+.++|+... +
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~----~ 99 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY----V 99 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC----C
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC----C
Confidence 3444555566788999999999999999999886 6799999999999999998865433 4799999998643 3
Q ss_pred CCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchh-hhhhcccccccccceeecCCCceeeccC
Q 008457 142 ISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLA-QERLTGKDQKISENFYVRGDGTRAFYFS 220 (564)
Q Consensus 142 ~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (564)
+ +++||+|++..+++|++ ++..+|++++++|||||.+++.++...... ...+. ..+. ......+++
T Consensus 100 ~-~~~fD~V~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~ 166 (256)
T 1nkv_A 100 A-NEKCDVAACVGATWIAG--GFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIA-------QACG---VSSTSDFLT 166 (256)
T ss_dssp C-SSCEEEEEEESCGGGTS--SSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHH-------HTTT---CSCGGGSCC
T ss_pred c-CCCCCEEEECCChHhcC--CHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHH-------HHHh---cccccccCC
Confidence 3 68899999999999995 678999999999999999999875422110 00000 0000 112223568
Q ss_pred HHHHHHHHHhCCCcEEEee
Q 008457 221 NDFLTSLFKENGFDVEELG 239 (564)
Q Consensus 221 ~~~l~~~l~~aGf~~~~~~ 239 (564)
.+++.++++++||+++...
T Consensus 167 ~~~~~~~l~~aGf~~~~~~ 185 (256)
T 1nkv_A 167 LPGLVGAFDDLGYDVVEMV 185 (256)
T ss_dssp HHHHHHHHHTTTBCCCEEE
T ss_pred HHHHHHHHHHCCCeeEEEE
Confidence 9999999999999987654
No 54
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.71 E-value=1e-16 Score=154.82 Aligned_cols=154 Identities=10% Similarity=0.088 Sum_probs=115.6
Q ss_pred Hhhhc-cCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCC
Q 008457 67 WGRYF-SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 67 ~~~~l-~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~ 143 (564)
+.+.+ ...++.+|||||||+|.++..+++.++. +|+|+|+|+.+++.|+++....+ .+++++++|+... +++
T Consensus 37 ~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~ 111 (257)
T 3f4k_A 37 AVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL----PFQ 111 (257)
T ss_dssp HHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC----SSC
T ss_pred HHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC----CCC
Confidence 33444 3467889999999999999999999754 99999999999999998865433 4599999999543 457
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCch-hhhhhcccccccccceeecCCCceeeccCHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDL-AQERLTGKDQKISENFYVRGDGTRAFYFSND 222 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (564)
+++||+|++..+++|+ ++..+++++.++|||||++++.++..... ........... ....+.+.+
T Consensus 112 ~~~fD~v~~~~~l~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 177 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNI---GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMD-----------AYPEISVIP 177 (257)
T ss_dssp TTCEEEEEEESCSCCC---CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHH-----------HCTTCCBHH
T ss_pred CCCEEEEEecChHhhc---CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHH-----------hCCCCCCHH
Confidence 8899999999999999 47789999999999999999987531110 00000000000 001134799
Q ss_pred HHHHHHHhCCCcEEEee
Q 008457 223 FLTSLFKENGFDVEELG 239 (564)
Q Consensus 223 ~l~~~l~~aGf~~~~~~ 239 (564)
++.++++++||+++...
T Consensus 178 ~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 178 TCIDKMERAGYTPTAHF 194 (257)
T ss_dssp HHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEE
Confidence 99999999999998753
No 55
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.71 E-value=3e-17 Score=157.50 Aligned_cols=102 Identities=21% Similarity=0.340 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
..+.+|||||||+|.++..|++. +.+|+|+|+|+.|++.|+++ .++.+.++|+... ++++++||+|++.
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~~-----~~v~~~~~~~e~~----~~~~~sfD~v~~~ 106 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALRH-----PRVTYAVAPAEDT----GLPPASVDVAIAA 106 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCCC-----TTEEEEECCTTCC----CCCSSCEEEEEEC
T ss_pred CCCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhhc-----CCceeehhhhhhh----cccCCcccEEEEe
Confidence 45679999999999999999987 67899999999999887653 4789999998643 5689999999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCC
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIG 189 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~ 189 (564)
.++||++ +..+++++.|+|||||.|++..+...
T Consensus 107 ~~~h~~~---~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 107 QAMHWFD---LDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp SCCTTCC---HHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred eehhHhh---HHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 9999984 56799999999999999999876543
No 56
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.70 E-value=1.2e-17 Score=164.43 Aligned_cols=159 Identities=16% Similarity=0.263 Sum_probs=113.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC------------------------------
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE------------------------------ 123 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~------------------------------ 123 (564)
.++.+|||||||+|.++..+++.+++.+|+|+|+|+.|++.|+++.....
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 36899999999999999999999888899999999999999998754321
Q ss_pred -----------------------------CCeeEEEecCCcccc-cCCCCCCceeEEEEcccccCC----ChhHHHHHHH
Q 008457 124 -----------------------------TRVSTFVCDLISDDL-SRQISPSSIDIVTMVFVLSAV----SPEKMSLVLQ 169 (564)
Q Consensus 124 -----------------------------~~i~~~~~d~~~~~~-~~~~~~~~fD~V~~~~vl~~~----~~~~~~~~l~ 169 (564)
.+++|.++|+..... ..++..++||+|+|..+++|+ +++++..+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 479999999865431 113467899999999999887 4558899999
Q ss_pred HHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHh--CCCcEEEeeee
Q 008457 170 NIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKE--NGFDVEELGLC 241 (564)
Q Consensus 170 ~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--aGf~~~~~~~~ 241 (564)
+++++|||||+|++......... . ...+....+ .......+.++++..+|.+ +||+.++....
T Consensus 205 ~~~~~LkpGG~lil~~~~~~~y~--~----~~~~~~~~~---~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWSSYG--K----RKTLTETIY---KNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHHHHH--T----TTTSCHHHH---HHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHhCCCcEEEEecCCchhhh--h----hhcccHHHH---hhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 99999999999998643321110 0 011110000 0001113467899999998 99988775443
No 57
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.70 E-value=7.9e-17 Score=145.19 Aligned_cols=135 Identities=19% Similarity=0.233 Sum_probs=109.6
Q ss_pred cCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 72 SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 72 ~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++ ..++++...| .++++++||+|+
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----~~~v~~~~~d-------~~~~~~~~D~v~ 80 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK----FDSVITLSDP-------KEIPDNSVDFIL 80 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH----CTTSEEESSG-------GGSCTTCEEEEE
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh----CCCcEEEeCC-------CCCCCCceEEEE
Confidence 34678899999999999999999884 4999999999999999987 3478888887 145788999999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhC
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKEN 231 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 231 (564)
+..+++|++ ++..+++++.++|||||.+++.++....... .......++.+++.++++
T Consensus 81 ~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~-- 138 (170)
T 3i9f_A 81 FANSFHDMD--DKQHVISEVKRILKDDGRVIIIDWRKENTGI------------------GPPLSIRMDEKDYMGWFS-- 138 (170)
T ss_dssp EESCSTTCS--CHHHHHHHHHHHEEEEEEEEEEEECSSCCSS------------------SSCGGGCCCHHHHHHHTT--
T ss_pred Eccchhccc--CHHHHHHHHHHhcCCCCEEEEEEcCcccccc------------------CchHhhhcCHHHHHHHHh--
Confidence 999999995 7889999999999999999998776533110 011122468999999998
Q ss_pred CCcEEEeeee
Q 008457 232 GFDVEELGLC 241 (564)
Q Consensus 232 Gf~~~~~~~~ 241 (564)
||++++....
T Consensus 139 Gf~~~~~~~~ 148 (170)
T 3i9f_A 139 NFVVEKRFNP 148 (170)
T ss_dssp TEEEEEEECS
T ss_pred CcEEEEccCC
Confidence 9998876543
No 58
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.70 E-value=9.6e-17 Score=150.41 Aligned_cols=139 Identities=21% Similarity=0.266 Sum_probs=110.2
Q ss_pred hHhHHHHHHhhcc----ccccccchhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHh
Q 008457 42 KKYWDLFYKRHQD----RFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMT 117 (564)
Q Consensus 42 ~~ywd~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~ 117 (564)
.+||+.+|..... .++.....+...+.+.+ .++.+|||+|||+|.++..+++.++. +|+|+|+|+.+++.|++
T Consensus 7 ~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~ 83 (215)
T 2pxx_A 7 VEYWDQRYQGAADSAPYDWFGDFSSFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQA 83 (215)
T ss_dssp HHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHH
T ss_pred hhHHHHHhccCCCCCCcccccCHHHHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHH
Confidence 5789998877642 34444444444554544 67889999999999999999988433 89999999999999998
Q ss_pred cccccCCCeeEEEecCCcccccCCCCCCceeEEEEcccccCCC-------------hhHHHHHHHHHHhccCCCeEEEEE
Q 008457 118 HKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMVFVLSAVS-------------PEKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 118 ~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~~vl~~~~-------------~~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
+... ..++.+.++|+... ++++++||+|++..+++++. ..++..+++++.++|||||.+++.
T Consensus 84 ~~~~-~~~i~~~~~d~~~~----~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 158 (215)
T 2pxx_A 84 CYAH-VPQLRWETMDVRKL----DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISM 158 (215)
T ss_dssp HTTT-CTTCEEEECCTTSC----CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hccc-CCCcEEEEcchhcC----CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEE
Confidence 8753 35789999998653 45678999999998887664 457789999999999999999998
Q ss_pred ecCC
Q 008457 185 DYAI 188 (564)
Q Consensus 185 ~~~~ 188 (564)
++..
T Consensus 159 ~~~~ 162 (215)
T 2pxx_A 159 TSAA 162 (215)
T ss_dssp ESCC
T ss_pred eCCC
Confidence 7664
No 59
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.69 E-value=2.7e-16 Score=148.87 Aligned_cols=159 Identities=17% Similarity=0.226 Sum_probs=119.2
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPS 145 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 145 (564)
.+.+.+. .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.. ++.++|+.... .+++++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~~------~~~~~d~~~~~--~~~~~~ 92 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKLD------HVVLGDIETMD--MPYEEE 92 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTSS------EEEESCTTTCC--CCSCTT
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCC------cEEEcchhhcC--CCCCCC
Confidence 3444454 67899999999999999999888 5899999999999999987753 67788886432 356778
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeec----CCCceeeccCH
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVR----GDGTRAFYFSN 221 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 221 (564)
+||+|++..+++|++ ++..+++++.++|+|||.+++.++.........-. ....+... ....+..+++.
T Consensus 93 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 165 (230)
T 3cc8_A 93 QFDCVIFGDVLEHLF--DPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPL-----LAGNWTYTEYGLLDKTHIRFFTF 165 (230)
T ss_dssp CEEEEEEESCGGGSS--CHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHH-----HTTCCCCBSSSTTBTTCCCCCCH
T ss_pred ccCEEEECChhhhcC--CHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHH-----hcCCceeccCCCCCcceEEEecH
Confidence 999999999999995 66799999999999999999988775543211100 00000000 11233446799
Q ss_pred HHHHHHHHhCCCcEEEeeeee
Q 008457 222 DFLTSLFKENGFDVEELGLCC 242 (564)
Q Consensus 222 ~~l~~~l~~aGf~~~~~~~~~ 242 (564)
+++.++++++||+++......
T Consensus 166 ~~~~~~l~~~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 166 NEMLRMFLKAGYSISKVDRVY 186 (230)
T ss_dssp HHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEecc
Confidence 999999999999998766543
No 60
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.69 E-value=5.2e-17 Score=159.98 Aligned_cols=165 Identities=14% Similarity=0.209 Sum_probs=113.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCC-------CeeEEEecCCccc----ccCCC
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTET-------RVSTFVCDLISDD----LSRQI 142 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~-------~i~~~~~d~~~~~----~~~~~ 142 (564)
.++.+|||||||+|..+..++... +.+|+|+|+|+.|++.|+++...... +++|.+.|+.... +..++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 457899999999998777666653 57899999999999999988653332 2568888874322 23345
Q ss_pred CCCceeEEEEcccccCC-ChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcc-----ccc--------ccc---c
Q 008457 143 SPSSIDIVTMVFVLSAV-SPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTG-----KDQ--------KIS---E 205 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~-~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~-----~~~--------~~~---~ 205 (564)
++++||+|+|..++||+ ..++...++++++++|||||++++.+++....... +.. ... .+. .
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~ 204 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKL-TDKKTFIIHKNLPSSENYMSVEKIAD 204 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTC-CSCEEEECCSSSCTTTSEEEECEEET
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHH-HhcCCcccccccccccceeeeccccc
Confidence 67899999999999875 33467899999999999999999987753222110 000 000 000 0
Q ss_pred -c--ee-ecC--CCceeeccCHHHHHHHHHhCCCcEEEeee
Q 008457 206 -N--FY-VRG--DGTRAFYFSNDFLTSLFKENGFDVEELGL 240 (564)
Q Consensus 206 -~--~~-~~~--~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 240 (564)
. .+ +.. .....++++.+++.++++++||+++....
T Consensus 205 ~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~ 245 (302)
T 2vdw_A 205 DRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVD 245 (302)
T ss_dssp TEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecC
Confidence 0 01 111 12233577889999999999999987643
No 61
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.69 E-value=1.8e-16 Score=156.97 Aligned_cols=162 Identities=15% Similarity=0.146 Sum_probs=121.7
Q ss_pred HhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCC
Q 008457 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 67 ~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~ 144 (564)
+.+.+...++.+|||||||+|.++..+++.++ .+|+|+|+|+.+++.|+++....+ .++++.++|+.. + +
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~-~ 135 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE------F-D 135 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG------C-C
T ss_pred HHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH------c-C
Confidence 34445557889999999999999999998863 799999999999999998865433 478999999853 2 6
Q ss_pred CceeEEEEcccccCC-------ChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccc---------ccccccee
Q 008457 145 SSIDIVTMVFVLSAV-------SPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKD---------QKISENFY 208 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~-------~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~---------~~~~~~~~ 208 (564)
++||+|++..+++|+ +.++...+++++.++|||||.+++.++.............. ..+....+
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIF 215 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTC
T ss_pred CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcC
Confidence 799999999999999 44677899999999999999999988776543322111000 00000001
Q ss_pred ecCCCceeeccCHHHHHHHHHhCCCcEEEeeee
Q 008457 209 VRGDGTRAFYFSNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 209 ~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
......+.+++.++++++||+++.....
T Consensus 216 -----p~~~~~s~~~~~~~l~~aGf~~~~~~~~ 243 (302)
T 3hem_A 216 -----PGGRLPRISQVDYYSSNAGWKVERYHRI 243 (302)
T ss_dssp -----TTCCCCCHHHHHHHHHHHTCEEEEEEEC
T ss_pred -----CCCCCCCHHHHHHHHHhCCcEEEEEEeC
Confidence 1112457999999999999999877554
No 62
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.69 E-value=3.3e-16 Score=147.40 Aligned_cols=143 Identities=18% Similarity=0.208 Sum_probs=110.1
Q ss_pred CCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEcc
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMVF 154 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~~ 154 (564)
++.+|||+|||+|.++..+++. +|+|+|+.+++.++++ ++.+.++|+... ++++++||+|++..
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~------~~~~~~~d~~~~----~~~~~~fD~v~~~~ 110 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR------GVFVLKGTAENL----PLKDESFDFALMVT 110 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT------TCEEEECBTTBC----CSCTTCEEEEEEES
T ss_pred CCCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc------CCEEEEcccccC----CCCCCCeeEEEEcc
Confidence 3889999999999999877543 9999999999999886 578888888543 45678999999999
Q ss_pred cccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCCCc
Q 008457 155 VLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENGFD 234 (564)
Q Consensus 155 vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 234 (564)
+++|++ ++..+++++.++|+|||.+++.++.........+.... .... ...+..+++.+++.++|+++||+
T Consensus 111 ~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~l~~~l~~~Gf~ 181 (219)
T 1vlm_A 111 TICFVD--DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNK--EKSV-----FYKNARFFSTEELMDLMRKAGFE 181 (219)
T ss_dssp CGGGSS--CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTT--TC-C-----CSTTCCCCCHHHHHHHHHHTTCE
T ss_pred hHhhcc--CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHh--cCcc-----hhcccccCCHHHHHHHHHHCCCe
Confidence 999995 67899999999999999999998776543322221110 0000 01123357999999999999999
Q ss_pred EEEeeeee
Q 008457 235 VEELGLCC 242 (564)
Q Consensus 235 ~~~~~~~~ 242 (564)
++......
T Consensus 182 ~~~~~~~~ 189 (219)
T 1vlm_A 182 EFKVVQTL 189 (219)
T ss_dssp EEEEEEEC
T ss_pred EEEEeccc
Confidence 98866544
No 63
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.69 E-value=1.8e-16 Score=151.67 Aligned_cols=160 Identities=17% Similarity=0.267 Sum_probs=114.7
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|+++....+.++++.++|+... +++ ++||+|++.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~-~~fD~v~~~ 103 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMREL----ELP-EPVDAITIL 103 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGC----CCS-SCEEEEEEC
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhc----CCC-CCcCEEEEe
Confidence 45689999999999999988776 6899999999999999988765556789999998643 223 789999998
Q ss_pred c-cccCC-ChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhh----hhcc--------cccc---------cccceeec
Q 008457 154 F-VLSAV-SPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQE----RLTG--------KDQK---------ISENFYVR 210 (564)
Q Consensus 154 ~-vl~~~-~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~----~~~~--------~~~~---------~~~~~~~~ 210 (564)
. +++|+ +.+++..+++++.++|||||.+++..+........ .+.. +... ....++..
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (243)
T 3d2l_A 104 CDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIE 183 (243)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEE
T ss_pred CCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEE
Confidence 6 99998 45788899999999999999999876543211000 0000 0000 00001100
Q ss_pred -CCC--------ceeeccCHHHHHHHHHhCCCcEEEeeee
Q 008457 211 -GDG--------TRAFYFSNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 211 -~~~--------~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
..+ .+..+++.+++.++|+++||+++.+...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 223 (243)
T 3d2l_A 184 GEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGD 223 (243)
T ss_dssp CTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEET
T ss_pred cCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecC
Confidence 011 1224679999999999999999887543
No 64
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.69 E-value=3.5e-17 Score=160.56 Aligned_cols=109 Identities=14% Similarity=0.113 Sum_probs=96.0
Q ss_pred cCCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEE
Q 008457 72 SGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 72 ~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
...++.+|||||||+|.++..+++.+| +.+|+|+|+|+.+++.|+++....+.++++.++|+... ++ +++||+|
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~----~~-~~~fD~v 93 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI----EL-NDKYDIA 93 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC----CC-SSCEEEE
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc----Cc-CCCeeEE
Confidence 446789999999999999999999877 48999999999999999998765566899999999753 33 4689999
Q ss_pred EEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 151 TMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 151 ~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
++..+++|++ ++..++++++++|||||++++.++.
T Consensus 94 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 94 ICHAFLLHMT--TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEESCGGGCS--SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECChhhcCC--CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 9999999995 6789999999999999999998876
No 65
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.69 E-value=1e-16 Score=162.70 Aligned_cols=162 Identities=19% Similarity=0.215 Sum_probs=120.0
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++....+ .+++++.+|+..... |++ ++||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~p-~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDV--PFP-TGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC--CCC-CCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCC--CCC-CCcCEEE
Confidence 4678999999999999999999999999999999 999999998865433 579999999975421 234 7899999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhC
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKEN 231 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 231 (564)
+..++|++++++...+|++++++|||||++++.+...+.................+. .........++.++|.++|+++
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~e~~~ll~~A 332 (363)
T 3dp7_A 254 MSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFT-AMANGNSKMFHSDDLIRCIENA 332 (363)
T ss_dssp EESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHH-HSSCSSCCSCCHHHHHHHHHTT
T ss_pred EechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHH-hhhCCCCcccCHHHHHHHHHHc
Confidence 999999999888889999999999999999998876543211100000000000000 0011112245899999999999
Q ss_pred CCcEEEeee
Q 008457 232 GFDVEELGL 240 (564)
Q Consensus 232 Gf~~~~~~~ 240 (564)
||+++++..
T Consensus 333 Gf~~v~~~~ 341 (363)
T 3dp7_A 333 GLEVEEIQD 341 (363)
T ss_dssp TEEESCCCC
T ss_pred CCeEEEEEe
Confidence 999887643
No 66
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.69 E-value=4.7e-17 Score=166.44 Aligned_cols=157 Identities=18% Similarity=0.206 Sum_probs=117.5
Q ss_pred CCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChHHHHHHHhccccc---------CCCeeEEEecCCcccc--cCC
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFT---------ETRVSTFVCDLISDDL--SRQ 141 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~~l~~a~~~~~~~---------~~~i~~~~~d~~~~~~--~~~ 141 (564)
.++.+|||||||+|.++..+++.. ++.+|+|+|+|+.+++.|+++.... ..+++++++|+..... ..+
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 578999999999999999999874 6789999999999999999875422 2689999999975421 115
Q ss_pred CCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCH
Q 008457 142 ISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSN 221 (564)
Q Consensus 142 ~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (564)
+++++||+|+++.+++|++ ++..+|++++++|||||+|++.++............. . ..+ .......++.
T Consensus 162 ~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~-~----~~~---~~~~~~~~~~ 231 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLST--NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQD-P----ILY---GECLGGALYL 231 (383)
T ss_dssp CCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHC-H----HHH---HTTCTTCCBH
T ss_pred CCCCCEEEEEEccchhcCC--CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhh-H----HHh---hcccccCCCH
Confidence 6788999999999999995 6889999999999999999998765432111111000 0 000 0011123578
Q ss_pred HHHHHHHHhCCCcEEEeee
Q 008457 222 DFLTSLFKENGFDVEELGL 240 (564)
Q Consensus 222 ~~l~~~l~~aGf~~~~~~~ 240 (564)
+++.++|+++||+.+++..
T Consensus 232 ~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 232 EDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHCCCceEEEEe
Confidence 9999999999998776544
No 67
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.68 E-value=1.4e-16 Score=158.39 Aligned_cols=158 Identities=11% Similarity=0.099 Sum_probs=119.6
Q ss_pred hhcc-CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCC
Q 008457 69 RYFS-GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPS 145 (564)
Q Consensus 69 ~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~ 145 (564)
+.+. ..++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.|+++....+ .++++.++|+... +++++
T Consensus 110 ~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~ 184 (312)
T 3vc1_A 110 DHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT----PFDKG 184 (312)
T ss_dssp TTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC----CCCTT
T ss_pred HHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC----CCCCC
Confidence 3444 4678999999999999999999875 6799999999999999998865443 4799999999643 45788
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHH
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLT 225 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 225 (564)
+||+|++..+++|++ +..+++++.++|||||.+++.++........ .......+...+ ...+++.+++.
T Consensus 185 ~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~s~~~~~ 253 (312)
T 3vc1_A 185 AVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQ-PSKWVSQINAHF-------ECNIHSRREYL 253 (312)
T ss_dssp CEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCS-CCHHHHHHHHHH-------TCCCCBHHHHH
T ss_pred CEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccc-hhHHHHHHHhhh-------cCCCCCHHHHH
Confidence 999999999999993 8899999999999999999987654432100 000000000000 01245899999
Q ss_pred HHHHhCCCcEEEeeeee
Q 008457 226 SLFKENGFDVEELGLCC 242 (564)
Q Consensus 226 ~~l~~aGf~~~~~~~~~ 242 (564)
++++++||+++......
T Consensus 254 ~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 254 RAMADNRLVPHTIVDLT 270 (312)
T ss_dssp HHHHTTTEEEEEEEECH
T ss_pred HHHHHCCCEEEEEEeCC
Confidence 99999999998776543
No 68
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.68 E-value=6.9e-16 Score=142.02 Aligned_cols=149 Identities=19% Similarity=0.198 Sum_probs=118.3
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++.. ++.+.+.|+... ++++++||+|++.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~----~~~~~~~d~~~~----~~~~~~~D~i~~~ 114 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP----EARWVVGDLSVD----QISETDFDLIVSA 114 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTS----CCCCCCEEEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC----CCcEEEcccccC----CCCCCceeEEEEC
Confidence 57889999999999999999988 6799999999999999998763 588899998653 3467899999998
Q ss_pred -ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCC
Q 008457 154 -FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENG 232 (564)
Q Consensus 154 -~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 232 (564)
.+++|++.++...+++++.++|+|||.+++...... .++.+++.++++++|
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~----------------------------~~~~~~~~~~l~~~G 166 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR----------------------------GWVFGDFLEVAERVG 166 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS----------------------------SCCHHHHHHHHHHHT
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC----------------------------CcCHHHHHHHHHHcC
Confidence 789999877889999999999999999998754321 137899999999999
Q ss_pred CcEEEeeeeeccccccccccccceeEEEEEEEe
Q 008457 233 FDVEELGLCCKQVENRARELVMNRRWVQAVFCS 265 (564)
Q Consensus 233 f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 265 (564)
|+++............. ...|+...++|
T Consensus 167 f~~~~~~~~~~~~~~~~-----~~~~~~~v~~k 194 (195)
T 3cgg_A 167 LELENAFESWDLKPFVQ-----GSEFLVAVFTK 194 (195)
T ss_dssp EEEEEEESSTTCCBCCT-----TCSEEEEEEEE
T ss_pred CEEeeeecccccCcCCC-----CCcEEEEEEec
Confidence 99987655433222211 13455555655
No 69
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.68 E-value=1.1e-16 Score=156.26 Aligned_cols=170 Identities=14% Similarity=0.141 Sum_probs=119.5
Q ss_pred hhhccCCCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChH------HHHHHHhcccccC--CCeeEEEec-CCccc
Q 008457 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPR------AVNLVMTHKDFTE--TRVSTFVCD-LISDD 137 (564)
Q Consensus 68 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~------~l~~a~~~~~~~~--~~i~~~~~d-~~~~~ 137 (564)
.+.+...++.+|||||||+|.++..+++.+ |..+|+|+|+|+. +++.|+++....+ .++++.++| +....
T Consensus 36 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 36 AEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDL 115 (275)
T ss_dssp HHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCC
T ss_pred HHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhcc
Confidence 344445788999999999999999999884 6689999999997 9999988865433 578999887 43332
Q ss_pred ccCCCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhccccccccc----ceeecCCC
Q 008457 138 LSRQISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISE----NFYVRGDG 213 (564)
Q Consensus 138 ~~~~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 213 (564)
+ ++++++||+|++..+++|++ ++..+++.+.++++|||.+++.++................+.. ........
T Consensus 116 ~--~~~~~~fD~v~~~~~l~~~~--~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (275)
T 3bkx_A 116 G--PIADQHFDRVVLAHSLWYFA--SANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVA 191 (275)
T ss_dssp G--GGTTCCCSEEEEESCGGGSS--CHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTC
T ss_pred C--CCCCCCEEEEEEccchhhCC--CHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccc
Confidence 2 56788999999999999996 4455777778888889999998876543211110000000000 00011112
Q ss_pred ceeeccCHHHHHHHHHhCCCcEEEeeee
Q 008457 214 TRAFYFSNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 214 ~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
....+++.+++.++++++||+++.....
T Consensus 192 ~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 192 NIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp SCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred cccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 2233679999999999999999876554
No 70
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.67 E-value=5.7e-16 Score=154.54 Aligned_cols=162 Identities=12% Similarity=0.103 Sum_probs=121.2
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~ 143 (564)
.+.+.+...++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|+++....+ .++.+.++|+.. + +
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~----~ 153 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED--F----A 153 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG--C----C
T ss_pred HHHHhcCCCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH--C----C
Confidence 33444555788999999999999999999875 6799999999999999998865433 468999998853 2 2
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcc---------cccccccceeecCCCc
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTG---------KDQKISENFYVRGDGT 214 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 214 (564)
++||+|++..+++|++.+++..+++++.++|||||.+++.++............ ....+....+ .
T Consensus 154 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 227 (318)
T 2fk8_A 154 -EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIF---P-- 227 (318)
T ss_dssp -CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTS---T--
T ss_pred -CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcC---C--
Confidence 789999999999999877899999999999999999999988765532211000 0000000000 0
Q ss_pred eeeccCHHHHHHHHHhCCCcEEEeee
Q 008457 215 RAFYFSNDFLTSLFKENGFDVEELGL 240 (564)
Q Consensus 215 ~~~~~~~~~l~~~l~~aGf~~~~~~~ 240 (564)
...+.+.+++.++++++||+++....
T Consensus 228 ~~~~~s~~~~~~~l~~aGf~~~~~~~ 253 (318)
T 2fk8_A 228 GGRLPSTEMMVEHGEKAGFTVPEPLS 253 (318)
T ss_dssp TCCCCCHHHHHHHHHHTTCBCCCCEE
T ss_pred CCcCCCHHHHHHHHHhCCCEEEEEEe
Confidence 11235899999999999999887544
No 71
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.67 E-value=2.4e-16 Score=158.19 Aligned_cols=152 Identities=18% Similarity=0.108 Sum_probs=117.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++....+ .++++..+|+. . +++. +||+|+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~----~~p~-~~D~v~ 240 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-D----PLPA-GAGGYV 240 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-S----CCCC-SCSEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-C----CCCC-CCcEEE
Confidence 4578999999999999999999999999999999 999999998765433 67999999986 2 2344 899999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhC
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKEN 231 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 231 (564)
+..++||+++++...+|++++++|+|||++++.+...+.......... .+... .....++.++|.++++++
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~------~~~~~---~~~~~~t~~e~~~ll~~a 311 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDL------RMLTY---FGGKERSLAELGELAAQA 311 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHH------HHHHH---HSCCCCCHHHHHHHHHHT
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHH------HHHhh---CCCCCCCHHHHHHHHHHC
Confidence 999999998777899999999999999999999876654200000000 00000 111235899999999999
Q ss_pred CCcEEEeeee
Q 008457 232 GFDVEELGLC 241 (564)
Q Consensus 232 Gf~~~~~~~~ 241 (564)
||+++++...
T Consensus 312 Gf~~~~~~~~ 321 (332)
T 3i53_A 312 GLAVRAAHPI 321 (332)
T ss_dssp TEEEEEEEEC
T ss_pred CCEEEEEEEC
Confidence 9999876543
No 72
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.67 E-value=9.2e-16 Score=145.07 Aligned_cols=108 Identities=22% Similarity=0.289 Sum_probs=93.1
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.|+++....+.++++.++|+... ++++++||+|+++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~~~~~D~v~~~ 110 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKL----SFEDKTFDYVIFI 110 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSC----CSCTTCEEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcC----CCCCCcEEEEEEc
Confidence 3488999999999999999998854 899999999999999988765557899999998653 3467899999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
.++++.+..++..+++++.++|||||.+++.++.
T Consensus 111 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 111 DSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 9966666578899999999999999999998765
No 73
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.67 E-value=2.4e-16 Score=156.31 Aligned_cols=161 Identities=15% Similarity=0.096 Sum_probs=117.4
Q ss_pred CCCCeEEEEcCCccccHHHHH-HhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLI-AAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~-~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
.++.+|||||||+|.++..++ ...|+.+|+|+|+|+.+++.|+++....+ .+++++++|+... +++ ++||+|
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~-~~fD~v 191 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL----DTR-EGYDLL 191 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC----CCC-SCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC----Ccc-CCeEEE
Confidence 678999999999999999885 45678999999999999999999876443 3599999998653 345 899999
Q ss_pred EEcccccCCC-hhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhccccc-cccc-------ceeecC-CCceeeccC
Q 008457 151 TMVFVLSAVS-PEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQ-KISE-------NFYVRG-DGTRAFYFS 220 (564)
Q Consensus 151 ~~~~vl~~~~-~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~-~~~~~~~~~ 220 (564)
+++.+++|++ +.....+++++.++|||||++++.++.......... .+.. .... ..+... ......+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (305)
T 3ocj_A 192 TSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDS-PWDMQAIDPHDLQLQQLVFTRLIQPRWNALRT 270 (305)
T ss_dssp ECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTC-CCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred EECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccc-cceeeccccchhhhhhhHHHHHHhhhhhccCC
Confidence 9999999996 444456899999999999999998866543211100 0000 0000 000000 111123579
Q ss_pred HHHHHHHHHhCCCcEEEeee
Q 008457 221 NDFLTSLFKENGFDVEELGL 240 (564)
Q Consensus 221 ~~~l~~~l~~aGf~~~~~~~ 240 (564)
.+++.++++++||+++.+..
T Consensus 271 ~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 271 HAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp HHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEEc
Confidence 99999999999999987764
No 74
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.66 E-value=7.2e-16 Score=151.39 Aligned_cols=144 Identities=19% Similarity=0.277 Sum_probs=113.5
Q ss_pred ccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEE
Q 008457 71 FSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 71 l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+.++++.++|+... ++ +++||+|
T Consensus 116 ~~~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~-~~~fD~i 188 (286)
T 3m70_A 116 AKIISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAA----NI-QENYDFI 188 (286)
T ss_dssp HHHSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGC----CC-CSCEEEE
T ss_pred hhccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccc----cc-cCCccEE
Confidence 33357899999999999999999998 67999999999999999998765555899999998643 22 6889999
Q ss_pred EEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHh
Q 008457 151 TMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKE 230 (564)
Q Consensus 151 ~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 230 (564)
+++.+++|+++.+...+++++.++|+|||.+++......... .......+.++.+++.+++..
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~~~~~ 251 (286)
T 3m70_A 189 VSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDV-----------------PCPLPFSFTFAENELKEYYKD 251 (286)
T ss_dssp EECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSS-----------------CCSSCCSCCBCTTHHHHHTTT
T ss_pred EEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCC-----------------CCCCCccccCCHHHHHHHhcC
Confidence 999999999888889999999999999999887654332110 001122335688999999865
Q ss_pred CCCcEEEeee
Q 008457 231 NGFDVEELGL 240 (564)
Q Consensus 231 aGf~~~~~~~ 240 (564)
|+++....
T Consensus 252 --~~~~~~~~ 259 (286)
T 3m70_A 252 --WEFLEYNE 259 (286)
T ss_dssp --SEEEEEEC
T ss_pred --CEEEEEEc
Confidence 88876543
No 75
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.66 E-value=1.5e-15 Score=142.48 Aligned_cols=113 Identities=21% Similarity=0.267 Sum_probs=95.9
Q ss_pred hhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCce
Q 008457 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSI 147 (564)
Q Consensus 68 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~f 147 (564)
...+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.... .++++.++|+.... ++++|
T Consensus 44 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~-----~~~~f 115 (216)
T 3ofk_A 44 RLSLSSGAVSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKRW-SHISWAATDILQFS-----TAELF 115 (216)
T ss_dssp HHHTTTSSEEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTTC-SSEEEEECCTTTCC-----CSCCE
T ss_pred HHHcccCCCCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcccC-CCeEEEEcchhhCC-----CCCCc
Confidence 33455577899999999999999999888 579999999999999999987643 38999999986532 57899
Q ss_pred eEEEEcccccCCC-hhHHHHHHHHHHhccCCCeEEEEEecCC
Q 008457 148 DIVTMVFVLSAVS-PEKMSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 148 D~V~~~~vl~~~~-~~~~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
|+|+++.+++|++ ++....+++++.++|||||.+++.++..
T Consensus 116 D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 116 DLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp EEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred cEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 9999999999997 3566789999999999999999987643
No 76
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.66 E-value=5.7e-16 Score=157.63 Aligned_cols=159 Identities=17% Similarity=0.215 Sum_probs=120.7
Q ss_pred hhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc--CCCeeEEEecCCcccccCCCCCC
Q 008457 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPS 145 (564)
Q Consensus 68 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~--~~~i~~~~~d~~~~~~~~~~~~~ 145 (564)
.+.+...+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++.... ..++++..+|+. . +++.
T Consensus 195 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~----~~p~- 267 (369)
T 3gwz_A 195 AAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-E----TIPD- 267 (369)
T ss_dssp HHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-T----CCCS-
T ss_pred HHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-C----CCCC-
Confidence 3344446789999999999999999999999999999999 99999999876533 367999999986 2 3344
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHH
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLT 225 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 225 (564)
+||+|++..++|++++++...+|+++++.|+|||++++.+...+...... .. . ....+... .....++.++|.
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~-~--~d~~~~~~---~~g~~~t~~e~~ 340 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TL-F--VDLLLLVL---VGGAERSESEFA 340 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HH-H--HHHHHHHH---HSCCCBCHHHHH
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hh-H--hhHHHHhh---cCCccCCHHHHH
Confidence 89999999999999877777999999999999999999887654421111 00 0 00000000 011235899999
Q ss_pred HHHHhCCCcEEEeee
Q 008457 226 SLFKENGFDVEELGL 240 (564)
Q Consensus 226 ~~l~~aGf~~~~~~~ 240 (564)
++|+++||+++++..
T Consensus 341 ~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 341 ALLEKSGLRVERSLP 355 (369)
T ss_dssp HHHHTTTEEEEEEEE
T ss_pred HHHHHCCCeEEEEEE
Confidence 999999999988744
No 77
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.66 E-value=1e-15 Score=148.63 Aligned_cols=154 Identities=21% Similarity=0.288 Sum_probs=114.7
Q ss_pred CCCCeEEEEcCCc---cccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCccccc-------CCCC
Q 008457 74 AGRKDVLEVGCGA---GNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLS-------RQIS 143 (564)
Q Consensus 74 ~~~~~VLDiGcG~---G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~-------~~~~ 143 (564)
.+..+|||||||+ |.++..+.+.+|+.+|+++|+|+.|++.|+++... ..+++++++|+...... ..++
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-DPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-CTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-CCCeEEEEeeCCCchhhhccchhhccCC
Confidence 4558999999999 98887777778899999999999999999988743 36799999999753210 1133
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCch-hhhhhcccccccccceeecCCCceeeccCHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDL-AQERLTGKDQKISENFYVRGDGTRAFYFSND 222 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (564)
..+||+|+++.+|||++++++..+|++++++|+|||.|++.+...... ....+.. .+.. .+....+++.+
T Consensus 155 ~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~s~~ 225 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLAR--------ITRE-NLGEGWARTPE 225 (274)
T ss_dssp TTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHH--------HHHH-HHSCCCCBCHH
T ss_pred CCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHH--------HHHh-cCCCCccCCHH
Confidence 358999999999999986678999999999999999999998775320 0011100 0000 01112346999
Q ss_pred HHHHHHHhCCCcEEEee
Q 008457 223 FLTSLFKENGFDVEELG 239 (564)
Q Consensus 223 ~l~~~l~~aGf~~~~~~ 239 (564)
++..+| .||++++..
T Consensus 226 ei~~~l--~G~~l~~~g 240 (274)
T 2qe6_A 226 EIERQF--GDFELVEPG 240 (274)
T ss_dssp HHHHTT--TTCEECTTC
T ss_pred HHHHHh--CCCeEccCc
Confidence 999999 599887643
No 78
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.66 E-value=6e-16 Score=147.80 Aligned_cols=141 Identities=13% Similarity=0.037 Sum_probs=103.9
Q ss_pred hHHHHHHHHHhHhHHHHHHhhccccccccchhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHH
Q 008457 32 FWRDKYEREAKKYWDLFYKRHQDRFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRA 111 (564)
Q Consensus 32 ~~~~~y~~~a~~ywd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~ 111 (564)
...+.|+..+..||+..+..+ .......+.+.+...++.+|||||||+|.++..|++. +.+|+|+|+|+.|
T Consensus 9 s~a~~wd~~a~~f~~~~~~~~-------~~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~m 79 (261)
T 3iv6_A 9 SKAEAWELIGNQFWTIGRVAA-------RPSDRENDIFLENIVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRM 79 (261)
T ss_dssp TTHHHHHTTTTHHHHTSCGGG-------SCCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHH
T ss_pred hhhhHHHHHHHHHHHHhhccc-------cHHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHH
Confidence 345678888888876532111 0122244455566678999999999999999999988 6799999999999
Q ss_pred HHHHHhcccccCCCeeEEEecCCccccc-CCCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 112 VNLVMTHKDFTETRVSTFVCDLISDDLS-RQISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 112 l~~a~~~~~~~~~~i~~~~~d~~~~~~~-~~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
++.|+++.... .+ ..++...... ....+++||+|+++.+++|++.++...+++++.++| |||.++++...
T Consensus 80 l~~Ar~~~~~~--~v---~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 80 CDDLAEALADR--CV---TIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp HHHHHHHTSSS--CC---EEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred HHHHHHHHHhc--cc---eeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 99999987543 22 2333221110 011257899999999999998888999999999999 99999997643
No 79
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.64 E-value=1.7e-15 Score=152.28 Aligned_cols=157 Identities=14% Similarity=0.185 Sum_probs=117.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++.+|||+|||+|.++..+++.+|+.+++++|++ .+++.|+++....+ .++++..+|+... +++. .||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~-~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV----DYGN-DYDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS----CCCS-CEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC----CCCC-CCcEEE
Confidence 67889999999999999999999989999999999 99999998764332 4699999998653 2343 499999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhC
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKEN 231 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 231 (564)
+..++||+++++...++++++++|+|||++++.++................+ .+.... .....++.++|.++++++
T Consensus 238 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~t~~~~~~ll~~a 313 (335)
T 2r3s_A 238 LPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSL--VMLATT--PNGDAYTFAEYESMFSNA 313 (335)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHH--HHHHHS--SSCCCCCHHHHHHHHHHT
T ss_pred EcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHH--HHHeeC--CCCCcCCHHHHHHHHHHC
Confidence 9999999987788999999999999999999988775432110000000000 000000 012245899999999999
Q ss_pred CCcEEEeee
Q 008457 232 GFDVEELGL 240 (564)
Q Consensus 232 Gf~~~~~~~ 240 (564)
||+.+++..
T Consensus 314 Gf~~~~~~~ 322 (335)
T 2r3s_A 314 GFSHSQLHS 322 (335)
T ss_dssp TCSEEEEEC
T ss_pred CCCeeeEEE
Confidence 999987644
No 80
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.63 E-value=8.6e-16 Score=143.60 Aligned_cols=135 Identities=16% Similarity=0.111 Sum_probs=104.6
Q ss_pred CCCeEEEEcCCccccHHHHHHhCCCc-EEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYPDV-FVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~~~-~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
++.+|||+|||+|.++..+ +. +++|+|+|+.+++.|+++. .++.+.++|+... ++++++||+|++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~----~~~~~~fD~v~~~ 102 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEAL----PFPGESFDVVLLF 102 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSC----CSCSSCEEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccC----CCCCCcEEEEEEc
Confidence 7889999999999988776 45 8999999999999999876 4678888888643 4577899999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCC
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENG 232 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 232 (564)
.+++|++ ++..+++++.++|||||.+++.+++.............. .. .....+..+++.+++.++|+ |
T Consensus 103 ~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 103 TTLEFVE--DVERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGE-KG-----VLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp SCTTTCS--CHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHH-TT-----CTTGGGCCCCCHHHHHHHHC--S
T ss_pred ChhhhcC--CHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhh-cc-----CccccccccCCHHHHHHHhc--C
Confidence 9999995 788999999999999999999988776543222111000 00 00112344679999999998 7
No 81
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.63 E-value=1.5e-15 Score=154.32 Aligned_cols=154 Identities=17% Similarity=0.254 Sum_probs=113.2
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
..+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++. .+++++.+|+.. +++.+ |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~p~~--D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-----SGVEHLGGDMFD-----GVPKG--DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-----CCCEEEecCCCC-----CCCCC--CEEEE
Confidence 35678999999999999999999999999999999 9888777643 579999999864 33544 99999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhccccccccc-ceeecCCCceeeccCHHHHHHHHHhC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISE-NFYVRGDGTRAFYFSNDFLTSLFKEN 231 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~a 231 (564)
..++||+++++...+|++++++|||||++++.+...+................ .+..... ....++.++|.++|+++
T Consensus 268 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~g~~rt~~e~~~ll~~A 345 (368)
T 3reo_A 268 KWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNP--GGKERTEKEFQALAMAS 345 (368)
T ss_dssp ESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSS--BCCCCCHHHHHHHHHHT
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcC--CCccCCHHHHHHHHHHC
Confidence 99999999888889999999999999999998876543211000000000000 0000000 11134899999999999
Q ss_pred CCcEEEeeee
Q 008457 232 GFDVEELGLC 241 (564)
Q Consensus 232 Gf~~~~~~~~ 241 (564)
||+.+++...
T Consensus 346 GF~~v~~~~~ 355 (368)
T 3reo_A 346 GFRGFKVASC 355 (368)
T ss_dssp TCCEEEEEEE
T ss_pred CCeeeEEEEe
Confidence 9999877554
No 82
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.63 E-value=5.4e-16 Score=153.29 Aligned_cols=110 Identities=18% Similarity=0.245 Sum_probs=93.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChHHHHHHHhccccc---CCCeeEEEecCCcccccC--CCCCCce
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFT---ETRVSTFVCDLISDDLSR--QISPSSI 147 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~~l~~a~~~~~~~---~~~i~~~~~d~~~~~~~~--~~~~~~f 147 (564)
.++.+|||||||+|.++..+++.+ ++.+|+|+|+|+.+++.|+++.... ..+++++++|+....+.. .+..++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 578999999999999999999875 7899999999999999999886544 578999999997643321 1123899
Q ss_pred eEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEec
Q 008457 148 DIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 148 D~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
|+|++..++||+ ++..+++++.++|||||.+++.++
T Consensus 115 D~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~~ 150 (299)
T 3g5t_A 115 DMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWGY 150 (299)
T ss_dssp EEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999999999 688999999999999999998443
No 83
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.63 E-value=2.6e-15 Score=153.30 Aligned_cols=163 Identities=18% Similarity=0.191 Sum_probs=118.4
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~ 143 (564)
.+.+.+...++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++....+ .++++..+|+.. +++
T Consensus 173 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~ 246 (374)
T 1qzz_A 173 APADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-----PLP 246 (374)
T ss_dssp HHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-----CCS
T ss_pred HHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-----cCC
Confidence 344444446789999999999999999999998899999999 999999998765333 479999999864 223
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEec--CCCchhhhhhcccccccccceeecCCCceeeccCH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDY--AIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSN 221 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (564)
. .||+|++..++||++..+...++++++++|||||++++.++ ..+......+..... + .+..... ...++.
T Consensus 247 ~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~-~--~~~~~~~---~~~~~~ 319 (374)
T 1qzz_A 247 V-TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLD-L--RMLTFMG---GRVRTR 319 (374)
T ss_dssp C-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHH-H--HHHHHHS---CCCCCH
T ss_pred C-CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcc-h--HHHHhCC---CcCCCH
Confidence 3 49999999999999866667999999999999999999887 432211111000000 0 0000001 124689
Q ss_pred HHHHHHHHhCCCcEEEeeee
Q 008457 222 DFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 222 ~~l~~~l~~aGf~~~~~~~~ 241 (564)
++|.++++++||+++++...
T Consensus 320 ~~~~~ll~~aGf~~~~~~~~ 339 (374)
T 1qzz_A 320 DEVVDLAGSAGLALASERTS 339 (374)
T ss_dssp HHHHHHHHTTTEEEEEEEEE
T ss_pred HHHHHHHHHCCCceEEEEEC
Confidence 99999999999999877654
No 84
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.62 E-value=1.3e-15 Score=154.30 Aligned_cols=157 Identities=15% Similarity=0.250 Sum_probs=116.8
Q ss_pred CC-CCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEE
Q 008457 74 AG-RKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 74 ~~-~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
.+ +.+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++....+ .++++..+|+.... +++.+.||+|
T Consensus 177 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~~D~v 252 (352)
T 3mcz_A 177 FARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDAR---NFEGGAADVV 252 (352)
T ss_dssp GTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGG---GGTTCCEEEE
T ss_pred cCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCc---ccCCCCccEE
Confidence 44 89999999999999999999999999999999 889999988764332 47999999987543 1134569999
Q ss_pred EEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHh
Q 008457 151 TMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKE 230 (564)
Q Consensus 151 ~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 230 (564)
++..++||+++++...+|++++++|+|||++++.+...+.............+ .+.....+ ...++.++|.+++++
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~t~~e~~~ll~~ 328 (352)
T 3mcz_A 253 MLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSL--HMMVNTNH--GELHPTPWIAGVVRD 328 (352)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHH--HHHHHSTT--CCCCCHHHHHHHHHH
T ss_pred EEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhH--HHHhhCCC--CCcCCHHHHHHHHHH
Confidence 99999999987788999999999999999999988765432111000000000 00000001 113589999999999
Q ss_pred CCCcEEEe
Q 008457 231 NGFDVEEL 238 (564)
Q Consensus 231 aGf~~~~~ 238 (564)
+||++++.
T Consensus 329 aGf~~~~~ 336 (352)
T 3mcz_A 329 AGLAVGER 336 (352)
T ss_dssp TTCEEEEE
T ss_pred CCCceeee
Confidence 99999873
No 85
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.62 E-value=2.2e-15 Score=152.85 Aligned_cols=164 Identities=14% Similarity=0.199 Sum_probs=120.8
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc--CCCeeEEEecCCcccccCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~--~~~i~~~~~d~~~~~~~~~~~ 143 (564)
.+.+.+...++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++.... ..++++..+|+... +++
T Consensus 181 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~ 255 (359)
T 1x19_A 181 LLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE----SYP 255 (359)
T ss_dssp HHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS----CCC
T ss_pred HHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC----CCC
Confidence 333444456789999999999999999999999999999999 99999999876533 24699999998653 233
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCC-ceeeccCHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDG-TRAFYFSND 222 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 222 (564)
+ +|+|++..++||+++++...+|++++++|||||++++.++..++.....+.... .+ +.....+ ....+++.+
T Consensus 256 ~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~-~~---~~~~~~g~~~~~~~t~~ 329 (359)
T 1x19_A 256 E--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLS-HY---ILGAGMPFSVLGFKEQA 329 (359)
T ss_dssp C--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHH-HH---GGGGGSSCCCCCCCCGG
T ss_pred C--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHH-HH---HHhcCCCCcccCCCCHH
Confidence 3 399999999999987779999999999999999999988665432100000000 00 0000111 112247899
Q ss_pred HHHHHHHhCCCcEEEeee
Q 008457 223 FLTSLFKENGFDVEELGL 240 (564)
Q Consensus 223 ~l~~~l~~aGf~~~~~~~ 240 (564)
+|.++++++||+++++..
T Consensus 330 e~~~ll~~aGf~~v~~~~ 347 (359)
T 1x19_A 330 RYKEILESLGYKDVTMVR 347 (359)
T ss_dssp GHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHCCCceEEEEe
Confidence 999999999999887654
No 86
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.62 E-value=1.7e-15 Score=153.02 Aligned_cols=158 Identities=16% Similarity=0.181 Sum_probs=113.8
Q ss_pred HhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccc--ccCCCeeEEEecCCcccccCCCCC
Q 008457 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD--FTETRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 67 ~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~~~ 144 (564)
+.+.+...++.+|||||||+|.++..+++.+|+.+++++|+ +.++. +++.. ....++++..+|+. . ++|
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~-~----~~p- 246 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFL-R----EVP- 246 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTT-T----CCC-
T ss_pred HHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCC-C----CCC-
Confidence 33344446788999999999999999999999999999999 55555 33322 23467999999986 2 234
Q ss_pred CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHH
Q 008457 145 SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFL 224 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 224 (564)
+||+|++..++||+++.+...+|++++++|||||++++.+...+.......... ....+... .....++.++|
T Consensus 247 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~---~d~~~~~~---~~~~~~t~~e~ 319 (348)
T 3lst_A 247 -HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKE---MDFMMLAA---RTGQERTAAEL 319 (348)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHH---HHHHHHHT---TSCCCCBHHHH
T ss_pred -CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhh---cChhhhhc---CCCcCCCHHHH
Confidence 899999999999998777789999999999999999998875443211100000 00000000 11123589999
Q ss_pred HHHHHhCCCcEEEeee
Q 008457 225 TSLFKENGFDVEELGL 240 (564)
Q Consensus 225 ~~~l~~aGf~~~~~~~ 240 (564)
.++++++||+++++..
T Consensus 320 ~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 320 EPLFTAAGLRLDRVVG 335 (348)
T ss_dssp HHHHHHTTEEEEEEEE
T ss_pred HHHHHHCCCceEEEEE
Confidence 9999999999987754
No 87
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.62 E-value=2e-15 Score=152.98 Aligned_cols=154 Identities=17% Similarity=0.243 Sum_probs=113.4
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
..+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++. .+++++.+|+.. +++.+ |+|++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~D~~~-----~~p~~--D~v~~ 265 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-----PGVTHVGGDMFK-----EVPSG--DTILM 265 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-----CCeEEEeCCcCC-----CCCCC--CEEEe
Confidence 35679999999999999999999999999999999 8888777643 579999999864 23444 99999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccc-cccccceeecCCCceeeccCHHHHHHHHHhC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKD-QKISENFYVRGDGTRAFYFSNDFLTSLFKEN 231 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 231 (564)
..++|++++++...+|++++++|||||++++.+...++.......... ......+.....+ ...++.++|.++|+++
T Consensus 266 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~--g~~rt~~e~~~ll~~A 343 (364)
T 3p9c_A 266 KWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPG--GRERYEREFQALARGA 343 (364)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSS--CCCCBHHHHHHHHHHT
T ss_pred hHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccC--CccCCHHHHHHHHHHC
Confidence 999999998888999999999999999999988765432110000000 0000000000001 1124799999999999
Q ss_pred CCcEEEeeee
Q 008457 232 GFDVEELGLC 241 (564)
Q Consensus 232 Gf~~~~~~~~ 241 (564)
||+.+++...
T Consensus 344 GF~~v~~~~~ 353 (364)
T 3p9c_A 344 GFTGVKSTYI 353 (364)
T ss_dssp TCCEEEEEEE
T ss_pred CCceEEEEEc
Confidence 9999887554
No 88
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.62 E-value=3.6e-15 Score=148.34 Aligned_cols=165 Identities=17% Similarity=0.170 Sum_probs=116.0
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc--------CCCeeEEEecCCcccccCCCC--
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--------ETRVSTFVCDLISDDLSRQIS-- 143 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~--------~~~i~~~~~d~~~~~~~~~~~-- 143 (564)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|+++.... ..++.+.++|+....+..+++
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 36789999999999999999875 4679999999999999999876432 247899999997654222343
Q ss_pred CCceeEEEEcccccCC--ChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcc----ccccc--------------
Q 008457 144 PSSIDIVTMVFVLSAV--SPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTG----KDQKI-------------- 203 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~--~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~----~~~~~-------------- 203 (564)
+++||+|++..++||+ +.+++..+++++.++|||||.+++..+............ .....
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 191 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLF 191 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSS
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCc
Confidence 4589999999999997 456788999999999999999999887653221110000 00000
Q ss_pred ccc--eee-cCCCceeeccCHHHHHHHHHhCCCcEEEee
Q 008457 204 SEN--FYV-RGDGTRAFYFSNDFLTSLFKENGFDVEELG 239 (564)
Q Consensus 204 ~~~--~~~-~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 239 (564)
... |.. .......+..+.+.+.+++++.||+++...
T Consensus 192 ~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~ 230 (313)
T 3bgv_A 192 GCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKK 230 (313)
T ss_dssp CCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEE
T ss_pred cceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEec
Confidence 000 000 001122345688999999999999998764
No 89
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.62 E-value=6e-15 Score=138.20 Aligned_cols=142 Identities=16% Similarity=0.247 Sum_probs=107.5
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~ 143 (564)
..|.+.+. .++.+|||||||+|.++..+++..|+.+++|+|+|+.+++.|+++....+ .++.++++|+.. +...++
T Consensus 32 ~~~~~~f~-~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~~ 108 (214)
T 1yzh_A 32 AKWRDLFG-NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD--LTDYFE 108 (214)
T ss_dssp TTHHHHHT-SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC--GGGTSC
T ss_pred cCHHHHcC-CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH--HHhhcC
Confidence 34544443 56889999999999999999999988999999999999999998765433 589999999865 322256
Q ss_pred CCceeEEEEcccccCCChh------HHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceee
Q 008457 144 PSSIDIVTMVFVLSAVSPE------KMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAF 217 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~------~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (564)
+++||+|+++....+.... ....+++++.++|+|||.+++......
T Consensus 109 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------------------- 160 (214)
T 1yzh_A 109 DGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRG---------------------------- 160 (214)
T ss_dssp TTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHH----------------------------
T ss_pred CCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHH----------------------------
Confidence 7899999998765443211 235799999999999999998642210
Q ss_pred ccCHHHHHHHHHhCCCcEEEee
Q 008457 218 YFSNDFLTSLFKENGFDVEELG 239 (564)
Q Consensus 218 ~~~~~~l~~~l~~aGf~~~~~~ 239 (564)
..+.+.+.++++||..+...
T Consensus 161 --~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 161 --LFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp --HHHHHHHHHHHHTCEEEEEE
T ss_pred --HHHHHHHHHHHCCCeeeecc
Confidence 12556678888898876543
No 90
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.61 E-value=6.2e-16 Score=160.27 Aligned_cols=157 Identities=15% Similarity=0.192 Sum_probs=112.3
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 144 (564)
..+.+.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... .....+...+.. .+ ++++
T Consensus 97 ~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~~~--~l--~~~~ 169 (416)
T 4e2x_A 97 RDFLATELTGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREKGIR-VRTDFFEKATAD--DV--RRTE 169 (416)
T ss_dssp HHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTTTCC-EECSCCSHHHHH--HH--HHHH
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHcCCC-cceeeechhhHh--hc--ccCC
Confidence 33444455567899999999999999999987 67999999999999999987211 000001111111 11 3456
Q ss_pred CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHH
Q 008457 145 SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFL 224 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 224 (564)
++||+|++..+++|++ ++..++++++++|||||++++.++.......... .. .+ -..+..+++.+++
T Consensus 170 ~~fD~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~--~~-----~~----~~~~~~~~s~~~l 236 (416)
T 4e2x_A 170 GPANVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTS--FD-----QI----FDEHFFLFSATSV 236 (416)
T ss_dssp CCEEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTC--GG-----GC----STTCCEECCHHHH
T ss_pred CCEEEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcc--hh-----hh----hhhhhhcCCHHHH
Confidence 8999999999999995 8899999999999999999998765432211100 00 00 1233446799999
Q ss_pred HHHHHhCCCcEEEeeee
Q 008457 225 TSLFKENGFDVEELGLC 241 (564)
Q Consensus 225 ~~~l~~aGf~~~~~~~~ 241 (564)
.++++++||+++.+...
T Consensus 237 ~~ll~~aGf~~~~~~~~ 253 (416)
T 4e2x_A 237 QGMAQRCGFELVDVQRL 253 (416)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred HHHHHHcCCEEEEEEEc
Confidence 99999999999877654
No 91
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=8.3e-16 Score=146.22 Aligned_cols=106 Identities=12% Similarity=0.064 Sum_probs=88.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE-
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (564)
.++.+|||||||+|..+..+++.. ..++++||+|+.+++.|+++....+.++.++.+|+... ..++++++||.|+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~--~~~~~~~~FD~i~~D 135 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV--APTLPDGHFDGILYD 135 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH--GGGSCTTCEEEEEEC
T ss_pred cCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh--cccccccCCceEEEe
Confidence 688999999999999999988765 45899999999999999998877777888888887432 23568899999985
Q ss_pred ----cccccCCChhHHHHHHHHHHhccCCCeEEEEE
Q 008457 153 ----VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 153 ----~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
...++|+ .++..+++++.|+|||||+|++.
T Consensus 136 ~~~~~~~~~~~--~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 136 TYPLSEETWHT--HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCBGGGTTT--HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eeecccchhhh--cchhhhhhhhhheeCCCCEEEEE
Confidence 3445566 58889999999999999999874
No 92
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.61 E-value=3.6e-15 Score=150.53 Aligned_cols=155 Identities=21% Similarity=0.251 Sum_probs=117.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc-CCCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~-~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
.+..+|||||||+|.++..+++++|+.+++..|. |.+++.|+++.... ..+++++.+|+... + ...+|+|++
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~----~--~~~~D~~~~ 250 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKD----P--LPEADLYIL 250 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTS----C--CCCCSEEEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccC----C--CCCceEEEe
Confidence 5678999999999999999999999999999998 88999999876533 37899999998653 2 235799999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENG 232 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 232 (564)
..+||++++++...+|+++++.|+|||+++|.+...++............+ .+.....+. -.|.++|+++|+++|
T Consensus 251 ~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl--~ml~~~~g~---ert~~e~~~ll~~AG 325 (353)
T 4a6d_A 251 ARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSL--NMLVQTEGQ---ERTPTHYHMLLSSAG 325 (353)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHH--HHHHSSSCC---CCCHHHHHHHHHHHT
T ss_pred eeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHH--HHHHhCCCc---CCCHHHHHHHHHHCC
Confidence 999999998888999999999999999999998765432111100000000 011111222 248999999999999
Q ss_pred CcEEEeee
Q 008457 233 FDVEELGL 240 (564)
Q Consensus 233 f~~~~~~~ 240 (564)
|+.+++..
T Consensus 326 f~~v~v~~ 333 (353)
T 4a6d_A 326 FRDFQFKK 333 (353)
T ss_dssp CEEEEEEC
T ss_pred CceEEEEE
Confidence 99987654
No 93
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.61 E-value=2.9e-13 Score=137.04 Aligned_cols=147 Identities=16% Similarity=0.154 Sum_probs=104.3
Q ss_pred EEEEeCCceEEEEEecccccccCCCccceechhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEc
Q 008457 328 IEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATD 406 (564)
Q Consensus 328 ~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD 406 (564)
..+.+.+..+++....+.++......| ++++........+.+|||||||+|.++..++..+ ..+|+++|
T Consensus 184 ~~~~~~~~~~~~~~~pg~Fs~~~~d~~----------~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD 253 (375)
T 4dcm_A 184 VSWKLEGTDWTIHNHANVFSRTGLDIG----------ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVD 253 (375)
T ss_dssp EEEEETTTTEEEEECTTCTTCSSCCHH----------HHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEE
T ss_pred eEEEecCCceEEEeCCCcccCCcccHH----------HHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEE
Confidence 345667777888776666554444444 4555555444566899999999998888888776 57999999
Q ss_pred CChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeC-----CCChHHHHHHHHHHh
Q 008457 407 GDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI-----PEAILPLFATAKELT 481 (564)
Q Consensus 407 ~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~-----~~~~~~l~~~~~~ll 481 (564)
+|+.+++.+++|+..|+... ..++.+...|..+ .+++++||+|+++.+++. ......+++.+.++|
T Consensus 254 ~s~~al~~Ar~n~~~ngl~~-~~~v~~~~~D~~~--------~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~L 324 (375)
T 4dcm_A 254 ESPMAVASSRLNVETNMPEA-LDRCEFMINNALS--------GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCL 324 (375)
T ss_dssp SCHHHHHHHHHHHHHHCGGG-GGGEEEEECSTTT--------TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHE
T ss_pred CcHHHHHHHHHHHHHcCCCc-CceEEEEechhhc--------cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhC
Confidence 99999999999999988631 1235445444432 234568999998877654 223347899999999
Q ss_pred hccCCCCCCCCCcEEEEEEee
Q 008457 482 ASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 482 ~~~~g~~~~~~~~~~~~~~~~ 502 (564)
+|+| .++++...
T Consensus 325 -kpgG--------~l~iv~n~ 336 (375)
T 4dcm_A 325 -KING--------ELYIVANR 336 (375)
T ss_dssp -EEEE--------EEEEEEET
T ss_pred -CCCc--------EEEEEEEC
Confidence 9988 77776543
No 94
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.60 E-value=3.7e-15 Score=151.38 Aligned_cols=163 Identities=17% Similarity=0.192 Sum_probs=120.2
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~ 143 (564)
.+.+.+...++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++....+ .+++++.+|+.. +++
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~ 247 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-----PLP 247 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-----CCS
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-----CCC
Confidence 334444446789999999999999999999998999999999 999999998764332 479999999864 223
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC-CCchhhhhhcccccccccceeecCCCceeeccCHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA-IGDLAQERLTGKDQKISENFYVRGDGTRAFYFSND 222 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (564)
. .||+|++..++||+++.+...++++++++|+|||++++.++. .++.....+..... + .+..... ...++.+
T Consensus 248 ~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~-~--~~~~~~~---~~~~t~~ 320 (360)
T 1tw3_A 248 R-KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELD-L--RMLVFLG---GALRTRE 320 (360)
T ss_dssp S-CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHH-H--HHHHHHS---CCCCBHH
T ss_pred C-CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhcc-H--HHhhhcC---CcCCCHH
Confidence 3 499999999999998777789999999999999999998876 33211000000000 0 0000001 1245899
Q ss_pred HHHHHHHhCCCcEEEeeee
Q 008457 223 FLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 223 ~l~~~l~~aGf~~~~~~~~ 241 (564)
+|.++|+++||+++++...
T Consensus 321 e~~~ll~~aGf~~~~~~~~ 339 (360)
T 1tw3_A 321 KWDGLAASAGLVVEEVRQL 339 (360)
T ss_dssp HHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEEeC
Confidence 9999999999999876554
No 95
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.60 E-value=3.7e-15 Score=149.74 Aligned_cols=161 Identities=17% Similarity=0.219 Sum_probs=118.6
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc--CCCeeEEEecCCcccccCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~--~~~i~~~~~d~~~~~~~~~~~ 143 (564)
.+.+.+...+ .+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++.... ..+++++.+|+.. +++
T Consensus 159 ~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~ 231 (334)
T 2ip2_A 159 EIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-----EVP 231 (334)
T ss_dssp HHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-----CCC
T ss_pred HHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-----CCC
Confidence 3334343344 8999999999999999999999999999999 99999999876432 3579999999865 224
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDF 223 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (564)
++||+|++..++||+++++...++++++++|+|||++++.+...++........... + .+..... ...++.++
T Consensus 232 -~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~-~--~~~~~~~---~~~~t~~e 304 (334)
T 2ip2_A 232 -SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWD-V--HLFMACA---GRHRTTEE 304 (334)
T ss_dssp -SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHH-H--HHHHHHS---CCCCBHHH
T ss_pred -CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhh-h--HhHhhCC---CcCCCHHH
Confidence 579999999999999877778999999999999999999987643311100000000 0 0000001 11348999
Q ss_pred HHHHHHhCCCcEEEeee
Q 008457 224 LTSLFKENGFDVEELGL 240 (564)
Q Consensus 224 l~~~l~~aGf~~~~~~~ 240 (564)
|.++++++||+++++..
T Consensus 305 ~~~ll~~aGf~~~~~~~ 321 (334)
T 2ip2_A 305 VVDLLGRGGFAVERIVD 321 (334)
T ss_dssp HHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHCCCceeEEEE
Confidence 99999999999887654
No 96
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.59 E-value=4.3e-14 Score=134.82 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=101.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
.++.+|||||||+|..+..++...++.+|+|+|+|+.|++.|+++....+ .+++++++|+...... +..+++||+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR-KDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC-TTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc-ccccCCccEEEE
Confidence 46789999999999999999987788999999999999999998765433 3699999988542210 011578999999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENG 232 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 232 (564)
..+ .++..+++++.++|||||.+++....... -..+++.+.++++|
T Consensus 148 ~~~------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~----------------------------~~~~~~~~~l~~~g 193 (240)
T 1xdz_A 148 RAV------ARLSVLSELCLPLVKKNGLFVALKAASAE----------------------------EELNAGKKAITTLG 193 (240)
T ss_dssp ECC------SCHHHHHHHHGGGEEEEEEEEEEECC-CH----------------------------HHHHHHHHHHHHTT
T ss_pred ecc------CCHHHHHHHHHHhcCCCCEEEEEeCCCch----------------------------HHHHHHHHHHHHcC
Confidence 763 35778999999999999999885321100 02356778899999
Q ss_pred CcEEEeeeee
Q 008457 233 FDVEELGLCC 242 (564)
Q Consensus 233 f~~~~~~~~~ 242 (564)
|.+.......
T Consensus 194 ~~~~~~~~~~ 203 (240)
T 1xdz_A 194 GELENIHSFK 203 (240)
T ss_dssp EEEEEEEEEE
T ss_pred CeEeEEEEEe
Confidence 9988765443
No 97
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.58 E-value=9.6e-15 Score=136.56 Aligned_cols=118 Identities=19% Similarity=0.275 Sum_probs=92.2
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~ 143 (564)
..|.+.+. .++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.|+++....+ .++.++++|+.. +...++
T Consensus 29 ~~~~~~f~-~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~--l~~~~~ 105 (213)
T 2fca_A 29 GKWNTVFG-NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT--LTDVFE 105 (213)
T ss_dssp TCHHHHHT-SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG--HHHHCC
T ss_pred CCHHHHcC-CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH--HHhhcC
Confidence 34444444 56789999999999999999999999999999999999999998765433 579999999865 221256
Q ss_pred CCceeEEEEcccccCCChh------HHHHHHHHHHhccCCCeEEEEEe
Q 008457 144 PSSIDIVTMVFVLSAVSPE------KMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~------~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
+++||.|+++....+.... ....+++++.++|||||.+++.+
T Consensus 106 ~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 106 PGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp TTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred cCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 7899999987654433211 13578999999999999999864
No 98
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.58 E-value=1.8e-14 Score=130.51 Aligned_cols=137 Identities=14% Similarity=0.145 Sum_probs=105.9
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~ 142 (564)
..+.+.+...++.+|||+|||+|.++..+++.+|+.+|+++|+|+.+++.|+++....+ .++ ++..|... .+ +.
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~-~~--~~ 90 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR-AF--DD 90 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG-GG--GG
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh-hh--hc
Confidence 33444555578889999999999999999998888999999999999999998765433 267 77777643 22 22
Q ss_pred CCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHH
Q 008457 143 SPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSND 222 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (564)
..++||+|++..+++| ..+++++.++|||||.+++.+.... +..
T Consensus 91 ~~~~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~~~------------------------------~~~ 134 (178)
T 3hm2_A 91 VPDNPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVTVE------------------------------SEQ 134 (178)
T ss_dssp CCSCCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECSHH------------------------------HHH
T ss_pred cCCCCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEeeccc------------------------------cHH
Confidence 2378999999999887 3589999999999999998764421 345
Q ss_pred HHHHHHHhCCCcEEEeeee
Q 008457 223 FLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 223 ~l~~~l~~aGf~~~~~~~~ 241 (564)
.+..++++.|+++..+...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~ 153 (178)
T 3hm2_A 135 MLWALRKQFGGTISSFAIS 153 (178)
T ss_dssp HHHHHHHHHCCEEEEEEEE
T ss_pred HHHHHHHHcCCeeEEEEee
Confidence 6778888889888776554
No 99
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.58 E-value=9.6e-15 Score=139.00 Aligned_cols=110 Identities=13% Similarity=0.122 Sum_probs=88.7
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE-
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (564)
.++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.|+++....+.++.++++|+... ..++++++||+|++
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV--APTLPDGHFDGILYD 135 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH--GGGSCTTCEEEEEEC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHh--hcccCCCceEEEEEC
Confidence 678899999999999999997653 34899999999999999998766567899999998543 22567889999999
Q ss_pred cccc--cCCChhHHHHHHHHHHhccCCCeEEEEEec
Q 008457 153 VFVL--SAVSPEKMSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 153 ~~vl--~~~~~~~~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
.+.+ +.....++..++++++++|||||++++.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred CcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 5543 223335667889999999999999998654
No 100
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.57 E-value=3.2e-14 Score=134.74 Aligned_cols=134 Identities=13% Similarity=0.083 Sum_probs=104.8
Q ss_pred CCCCeEEEEcCC-ccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 74 AGRKDVLEVGCG-AGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG-~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
.++.+|||+||| +|.++..+++.. +.+|+|+|+|+.+++.|+++....+.+++++++|+... .++++++||+|++
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~---~~~~~~~fD~I~~ 129 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGII---KGVVEGTFDVIFS 129 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSS---TTTCCSCEEEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhh---hhcccCceeEEEE
Confidence 678999999999 999999999885 67999999999999999988765555899999997422 1446689999999
Q ss_pred cccccCCCh-----------------hHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCce
Q 008457 153 VFVLSAVSP-----------------EKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTR 215 (564)
Q Consensus 153 ~~vl~~~~~-----------------~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (564)
+-.+++.+. +....+++++.++|||||.+++......
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------------------------- 183 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-------------------------- 183 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH--------------------------
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH--------------------------
Confidence 876655431 2247899999999999999998643211
Q ss_pred eeccCHHHHHHHHHhCCCcEEEeee
Q 008457 216 AFYFSNDFLTSLFKENGFDVEELGL 240 (564)
Q Consensus 216 ~~~~~~~~l~~~l~~aGf~~~~~~~ 240 (564)
...+++.+++++.||.+..+..
T Consensus 184 ---~~~~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 184 ---KLLNVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp ---HHHHHHHHHHHHTTCEEEEEEE
T ss_pred ---hHHHHHHHHHHHcCCceEEEEe
Confidence 1357788999999998776644
No 101
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.57 E-value=2.1e-15 Score=145.92 Aligned_cols=102 Identities=15% Similarity=0.134 Sum_probs=86.5
Q ss_pred CCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEcc
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMVF 154 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~~ 154 (564)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. . .+.++|+... ++++++||+|++..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~---~--~~~~~d~~~~----~~~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV---K--NVVEAKAEDL----PFPSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC---S--CEEECCTTSC----CSCTTCEEEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC---C--CEEECcHHHC----CCCCCCEEEEEEcc
Confidence 7889999999999999999887 6799999999999999998764 1 2778887543 45778999999988
Q ss_pred cccCCChhHHHHHHHHHHhccCCCeEEEEEecCC
Q 008457 155 VLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 155 vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
+++|+.. ++..+++++.++|||||.+++..++.
T Consensus 123 ~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 123 DVLSYVE-NKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp SHHHHCS-CHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred hhhhccc-cHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 7766642 48899999999999999999987764
No 102
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.57 E-value=1.1e-12 Score=132.82 Aligned_cols=150 Identities=15% Similarity=0.168 Sum_probs=109.3
Q ss_pred eEEEEEeCCceEEEEEecccccccCCCccceechhHHHHHHHHhcCC--CCCCCCeEEEeCCcccHHHHHHHhcCCCEEE
Q 008457 326 EMIEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNP--TIVAGKKVLELGCGCGGICSMVAAGSADLVV 403 (564)
Q Consensus 326 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~~~~l~~~l~~~~--~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~ 403 (564)
....+.+.+..+.+....+.+.... +.+.+..+.+.+.... ...++.+|||||||+|.++..++.. ..+|+
T Consensus 187 ~~~~~~~~g~~~~~~~~pgvFs~~~------~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~ 259 (381)
T 3dmg_A 187 RAFSARILGAEYTFHHLPGVFSAGK------VDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVV 259 (381)
T ss_dssp EEEEEEETTEEEEEEECTTCTTTTS------CCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEE
T ss_pred ceeeEEecCceEEEEeCCCceeCCC------CCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEE
Confidence 4556777888888887666653322 3345666666665422 2347789999999999888887776 45999
Q ss_pred EEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeC-----CCChHHHHHHHH
Q 008457 404 ATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI-----PEAILPLFATAK 478 (564)
Q Consensus 404 ~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~-----~~~~~~l~~~~~ 478 (564)
++|+|+.+++.+++|+..|+.. +.+...|+.+.. ...++||+|+++.+++. ......+++.+.
T Consensus 260 gvDis~~al~~A~~n~~~~~~~-----v~~~~~D~~~~~-------~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~ 327 (381)
T 3dmg_A 260 GVEDDLASVLSLQKGLEANALK-----AQALHSDVDEAL-------TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAA 327 (381)
T ss_dssp EEESBHHHHHHHHHHHHHTTCC-----CEEEECSTTTTS-------CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHcCCC-----eEEEEcchhhcc-------ccCCCeEEEEECCchhhcccccHHHHHHHHHHHH
Confidence 9999999999999999998763 555555554321 12469999998777665 456778999999
Q ss_pred HHhhccCCCCCCCCCcEEEEEEeec
Q 008457 479 ELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 479 ~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
++| +|+| .++++....
T Consensus 328 ~~L-kpGG--------~l~iv~n~~ 343 (381)
T 3dmg_A 328 ARL-RPGG--------VFFLVSNPF 343 (381)
T ss_dssp HHE-EEEE--------EEEEEECTT
T ss_pred Hhc-CcCc--------EEEEEEcCC
Confidence 999 9988 777765443
No 103
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.57 E-value=5.3e-14 Score=131.41 Aligned_cols=143 Identities=15% Similarity=0.179 Sum_probs=106.2
Q ss_pred hccCCCCCeEEEEcCCccccHHHHHHh-CCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCcee
Q 008457 70 YFSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 70 ~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
.+...++.+|||+|||+|.++..+++. +|..+|+|+|+++.|++.++++... ..++..+..|....... ++..+++|
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-~~ni~~V~~d~~~p~~~-~~~~~~vD 149 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-RRNIFPILGDARFPEKY-RHLVEGVD 149 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-CTTEEEEESCTTCGGGG-TTTCCCEE
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-hcCeeEEEEeccCcccc-ccccceEE
Confidence 345689999999999999999999987 6889999999999999999887654 35888888888654432 55678999
Q ss_pred EEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHH
Q 008457 149 IVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLF 228 (564)
Q Consensus 149 ~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 228 (564)
+|++.. .|. ++...++.++.+.|||||.+++........ ... . ... ..++..+.|
T Consensus 150 vVf~d~--~~~--~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d---~~~--------------p-~~~---~~~~ev~~L 204 (233)
T 4df3_A 150 GLYADV--AQP--EQAAIVVRNARFFLRDGGYMLMAIKARSID---VTT--------------E-PSE---VYKREIKTL 204 (233)
T ss_dssp EEEECC--CCT--THHHHHHHHHHHHEEEEEEEEEEEECCHHH---HHT--------------C-CCH---HHHHHHHHH
T ss_pred EEEEec--cCC--hhHHHHHHHHHHhccCCCEEEEEEecccCC---CCC--------------C-hHH---HHHHHHHHH
Confidence 998643 232 477889999999999999999875332111 000 0 000 123445778
Q ss_pred HhCCCcEEEee
Q 008457 229 KENGFDVEELG 239 (564)
Q Consensus 229 ~~aGf~~~~~~ 239 (564)
+++||++++..
T Consensus 205 ~~~GF~l~e~i 215 (233)
T 4df3_A 205 MDGGLEIKDVV 215 (233)
T ss_dssp HHTTCCEEEEE
T ss_pred HHCCCEEEEEE
Confidence 89999987753
No 104
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.57 E-value=4.3e-14 Score=131.27 Aligned_cols=133 Identities=11% Similarity=0.091 Sum_probs=105.8
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~ 143 (564)
..+...+...++.+|||+|||+|.++..+++.+|..+|+++|+|+.+++.|+++....+ .+++++++|+..... .
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~ 105 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD----D 105 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT----T
T ss_pred HHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh----c
Confidence 33444555678899999999999999999999888999999999999999998765433 578999999853211 2
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDF 223 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (564)
.++||+|++..+++ ++..+++++.++|||||.+++..... -+.++
T Consensus 106 ~~~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~------------------------------~~~~~ 150 (204)
T 3e05_A 106 LPDPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTL------------------------------DTLTK 150 (204)
T ss_dssp SCCCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBH------------------------------HHHHH
T ss_pred CCCCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEeccc------------------------------ccHHH
Confidence 36799999988765 46789999999999999999965431 13577
Q ss_pred HHHHHHhCCCcEE
Q 008457 224 LTSLFKENGFDVE 236 (564)
Q Consensus 224 l~~~l~~aGf~~~ 236 (564)
+.++++++||.+.
T Consensus 151 ~~~~l~~~g~~~~ 163 (204)
T 3e05_A 151 AVEFLEDHGYMVE 163 (204)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHCCCcee
Confidence 8889999999433
No 105
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.56 E-value=5e-15 Score=150.93 Aligned_cols=151 Identities=20% Similarity=0.283 Sum_probs=110.5
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++. .+++++.+|+.. +++. ||+|++.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~~~--~D~v~~~ 274 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-----SGIEHVGGDMFA-----SVPQ--GDAMILK 274 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCC--EEEEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-----CCCEEEeCCccc-----CCCC--CCEEEEe
Confidence 5678999999999999999999999999999999 9999877653 459999999864 2343 9999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccc-eeecCCCceeeccCHHHHHHHHHhCC
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISEN-FYVRGDGTRAFYFSNDFLTSLFKENG 232 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~aG 232 (564)
.++||+++.+...+|++++++|||||++++.++..+................. +.....+ ..++.++|.++|+++|
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~t~~e~~~ll~~aG 351 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGG---RERTEKQYEKLSKLSG 351 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSC---CCEEHHHHHHHHHHTT
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCC---ccCCHHHHHHHHHHCC
Confidence 99999986666799999999999999999987654321100000000000000 0000011 2348999999999999
Q ss_pred CcEEEeee
Q 008457 233 FDVEELGL 240 (564)
Q Consensus 233 f~~~~~~~ 240 (564)
|+++++..
T Consensus 352 f~~~~~~~ 359 (372)
T 1fp1_D 352 FSKFQVAC 359 (372)
T ss_dssp CSEEEEEE
T ss_pred CceEEEEE
Confidence 99987655
No 106
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.56 E-value=2.6e-14 Score=152.59 Aligned_cols=168 Identities=12% Similarity=0.170 Sum_probs=118.2
Q ss_pred hhhccCCCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChHHHHHHHhcccc-------cCCCeeEEEecCCccccc
Q 008457 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDF-------TETRVSTFVCDLISDDLS 139 (564)
Q Consensus 68 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~~l~~a~~~~~~-------~~~~i~~~~~d~~~~~~~ 139 (564)
.+.+...++.+|||||||+|.++..|++.+ +..+|+|+|+|+.|++.|+++... ...++++.++|+...
T Consensus 714 LelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL--- 790 (950)
T 3htx_A 714 LKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF--- 790 (950)
T ss_dssp HHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC---
T ss_pred HHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC---
Confidence 334444688999999999999999999886 447999999999999999884321 124799999999653
Q ss_pred CCCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccc----cc--cceeecCCC
Q 008457 140 RQISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQK----IS--ENFYVRGDG 213 (564)
Q Consensus 140 ~~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~ 213 (564)
++++++||+|++..+++|+++.....+++++.++|||| .+++.+++..... .+...... .. .........
T Consensus 791 -p~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~--lF~~Lnp~tr~~dPd~~~~~~fRh~ 866 (950)
T 3htx_A 791 -DSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNT--ILQRSTPETQEENNSEPQLPKFRNH 866 (950)
T ss_dssp -CTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHH--HHTCC------------CCSSCSCS
T ss_pred -CcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhh--hhhhccccccccccccccccccccc
Confidence 44678999999999999998766778999999999999 8888776643211 11110000 00 000011122
Q ss_pred ceeeccCHHHHHH----HHHhCCCcEEEeeeee
Q 008457 214 TRAFYFSNDFLTS----LFKENGFDVEELGLCC 242 (564)
Q Consensus 214 ~~~~~~~~~~l~~----~l~~aGf~~~~~~~~~ 242 (564)
.+.+.|+.++++. +.++.||.+.......
T Consensus 867 DHrFEWTReEFr~Wae~LAer~GYsVefvGVGD 899 (950)
T 3htx_A 867 DHKFEWTREQFNQWASKLGKRHNYSVEFSGVGG 899 (950)
T ss_dssp SCSCCBCHHHHHHHHHHHHHHTTEEEEEEEESS
T ss_pred CcceeecHHHHHHHHHHHHHhcCcEEEEEccCC
Confidence 3444578888887 6778899876555543
No 107
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.55 E-value=8.5e-15 Score=148.10 Aligned_cols=147 Identities=19% Similarity=0.292 Sum_probs=110.7
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++. .++++..+|+.. +++ .||+|++.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~p--~~D~v~~~ 253 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-----NNLTYVGGDMFT-----SIP--NADAVLLK 253 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-----TTEEEEECCTTT-----CCC--CCSEEEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-----CCcEEEeccccC-----CCC--CccEEEee
Confidence 4678999999999999999999999999999999 9999887653 349999999854 223 39999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCC---CeEEEEEecCCCchhhh----hhcccccccccceeecCCCceeeccCHHHHHH
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKP---TGYVLFRDYAIGDLAQE----RLTGKDQKISENFYVRGDGTRAFYFSNDFLTS 226 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~Lkp---gG~lii~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 226 (564)
.++||+++.+...+|++++++||| ||++++.++..+..... ....... + .+... . ...++.++|.+
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d-~--~~~~~-~---g~~~t~~e~~~ 326 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMD-V--NMACL-N---GKERNEEEWKK 326 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHH-H--HGGGG-T---CCCEEHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhcc-H--HHHhc-c---CCCCCHHHHHH
Confidence 999999866667999999999999 99999988764332100 0000000 0 00000 1 12347999999
Q ss_pred HHHhCCCcEEEeee
Q 008457 227 LFKENGFDVEELGL 240 (564)
Q Consensus 227 ~l~~aGf~~~~~~~ 240 (564)
+++++||+.+++..
T Consensus 327 ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 327 LFIEAGFQHYKISP 340 (352)
T ss_dssp HHHHTTCCEEEEEE
T ss_pred HHHHCCCCeeEEEe
Confidence 99999999887654
No 108
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.55 E-value=3.4e-14 Score=132.05 Aligned_cols=125 Identities=14% Similarity=0.184 Sum_probs=101.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCC-CeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTET-RVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~-~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++....+. ++++.++|+.. +.+++||+|++
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~------~~~~~fD~i~~ 131 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA------DVDGKFDLIVA 131 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT------TCCSCEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc------cCCCCceEEEE
Confidence 57889999999999999998875 456999999999999999988654442 38999999854 24589999999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENG 232 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 232 (564)
+..+++ +..+++++.++|+|||.+++.++.. .+.+++.++++++|
T Consensus 132 ~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~~------------------------------~~~~~~~~~~~~~G 176 (205)
T 3grz_A 132 NILAEI-----LLDLIPQLDSHLNEDGQVIFSGIDY------------------------------LQLPKIEQALAENS 176 (205)
T ss_dssp ESCHHH-----HHHHGGGSGGGEEEEEEEEEEEEEG------------------------------GGHHHHHHHHHHTT
T ss_pred CCcHHH-----HHHHHHHHHHhcCCCCEEEEEecCc------------------------------ccHHHHHHHHHHcC
Confidence 877654 4678999999999999999865432 14678889999999
Q ss_pred CcEEEeee
Q 008457 233 FDVEELGL 240 (564)
Q Consensus 233 f~~~~~~~ 240 (564)
|+++....
T Consensus 177 f~~~~~~~ 184 (205)
T 3grz_A 177 FQIDLKMR 184 (205)
T ss_dssp EEEEEEEE
T ss_pred CceEEeec
Confidence 99876543
No 109
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.55 E-value=4.9e-14 Score=131.99 Aligned_cols=112 Identities=18% Similarity=0.291 Sum_probs=92.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||||||+|.++..+ ..+++|+|+|+. ++.+.++|+... ++++++||+|++.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l-----~~~v~~~D~s~~--------------~~~~~~~d~~~~----~~~~~~fD~v~~~ 122 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI-----RNPVHCFDLASL--------------DPRVTVCDMAQV----PLEDESVDVAVFC 122 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC-----CSCEEEEESSCS--------------STTEEESCTTSC----SCCTTCEEEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHh-----hccEEEEeCCCC--------------CceEEEeccccC----CCCCCCEeEEEEe
Confidence 56789999999999988766 257999999986 467888888652 4577899999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCCC
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENGF 233 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 233 (564)
.++|+ .++..+++++.++|+|||.+++.++... +.+.+++.++++++||
T Consensus 123 ~~l~~---~~~~~~l~~~~~~L~~gG~l~i~~~~~~----------------------------~~~~~~~~~~l~~~Gf 171 (215)
T 2zfu_A 123 LSLMG---TNIRDFLEEANRVLKPGGLLKVAEVSSR----------------------------FEDVRTFLRAVTKLGF 171 (215)
T ss_dssp SCCCS---SCHHHHHHHHHHHEEEEEEEEEEECGGG----------------------------CSCHHHHHHHHHHTTE
T ss_pred hhccc---cCHHHHHHHHHHhCCCCeEEEEEEcCCC----------------------------CCCHHHHHHHHHHCCC
Confidence 99975 3678999999999999999999865320 1278999999999999
Q ss_pred cEEEee
Q 008457 234 DVEELG 239 (564)
Q Consensus 234 ~~~~~~ 239 (564)
+++...
T Consensus 172 ~~~~~~ 177 (215)
T 2zfu_A 172 KIVSKD 177 (215)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 987643
No 110
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.55 E-value=2e-14 Score=131.31 Aligned_cols=109 Identities=17% Similarity=0.135 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++....+ .++++++.+..... .+++++||+|++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~---~~~~~~fD~v~~ 95 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD---HYVREPIRAAIF 95 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG---GTCCSCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH---hhccCCcCEEEE
Confidence 57899999999999999999988 7899999999999999998875433 67888886664321 234678999998
Q ss_pred cc-cccCC------ChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 153 VF-VLSAV------SPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 153 ~~-vl~~~------~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
+. .+++. ..++...+++++.++|||||.+++..+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 73 33220 2356778999999999999999998664
No 111
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.54 E-value=4.6e-15 Score=139.41 Aligned_cols=155 Identities=12% Similarity=0.108 Sum_probs=103.2
Q ss_pred hccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHH----Hhccccc-CCCeeEEEecCCcccccCCCCC
Q 008457 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLV----MTHKDFT-ETRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 70 ~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a----~~~~~~~-~~~i~~~~~d~~~~~~~~~~~~ 144 (564)
.+...++.+|||||||+|.++..+++.+|+.+|+|+|+|+.|++.+ +++.... ..++.+.++|+... ++++
T Consensus 22 ~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l----~~~~ 97 (218)
T 3mq2_A 22 QLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL----PPLS 97 (218)
T ss_dssp HHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC----CSCC
T ss_pred HhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC----CCCC
Confidence 3445788999999999999999999999899999999999988753 3332222 24799999999653 3455
Q ss_pred CceeEEEEcc---ccc--CCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeecc
Q 008457 145 SSIDIVTMVF---VLS--AVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYF 219 (564)
Q Consensus 145 ~~fD~V~~~~---vl~--~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (564)
++ |.|.+.. .++ |++ ++..++++++++|||||.+++........ ....... . .......+
T Consensus 98 ~~-d~v~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~------~~~~~~~-~-----~~~~~~~~ 162 (218)
T 3mq2_A 98 GV-GELHVLMPWGSLLRGVLG--SSPEMLRGMAAVCRPGASFLVALNLHAWR------PSVPEVG-E-----HPEPTPDS 162 (218)
T ss_dssp CE-EEEEEESCCHHHHHHHHT--SSSHHHHHHHHTEEEEEEEEEEEEGGGBT------TBCGGGT-T-----CCCCCHHH
T ss_pred CC-CEEEEEccchhhhhhhhc--cHHHHHHHHHHHcCCCcEEEEEecccccc------ccccccc-c-----CCccchHH
Confidence 55 7766433 221 442 44789999999999999999954221100 0000000 0 00001112
Q ss_pred CHHHHHHHHHhCCCcEEEeeeeec
Q 008457 220 SNDFLTSLFKENGFDVEELGLCCK 243 (564)
Q Consensus 220 ~~~~l~~~l~~aGf~~~~~~~~~~ 243 (564)
..+.+..+++++||++..+.+...
T Consensus 163 ~~~~l~~~l~~aGf~i~~~~~~~~ 186 (218)
T 3mq2_A 163 ADEWLAPRYAEAGWKLADCRYLEP 186 (218)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEECH
T ss_pred HHHHHHHHHHHcCCCceeeeccch
Confidence 355688899999999988776543
No 112
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.54 E-value=5.3e-14 Score=135.84 Aligned_cols=154 Identities=10% Similarity=0.036 Sum_probs=115.3
Q ss_pred ccceechhHHHHHHHHhcCCCCC-CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCce
Q 008457 353 TGLMLWESAHLMAAVLARNPTIV-AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKL 431 (564)
Q Consensus 353 ~G~~~W~~~~~l~~~l~~~~~~~-~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i 431 (564)
.|+.....+.+|+.|+ ... ++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++|+..|++. +++
T Consensus 29 ~~~~~~~d~~ll~~~~----~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~---~~v 101 (259)
T 3lpm_A 29 SVFSFSIDAVLLAKFS----YLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLE---DQI 101 (259)
T ss_dssp TTBCCCHHHHHHHHHC----CCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCT---TTE
T ss_pred CCccCcHHHHHHHHHh----cCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCc---ccE
Confidence 4455556688888886 233 67899999999998888888776669999999999999999999999875 567
Q ss_pred EEEEeecCCCccchhhhhhcCCCccEEEEeceeeCC--------------------CChHHHHHHHHHHhhccCCCCCCC
Q 008457 432 ITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP--------------------EAILPLFATAKELTASSNKSLRED 491 (564)
Q Consensus 432 ~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~--------------------~~~~~l~~~~~~ll~~~~g~~~~~ 491 (564)
.+...|+.+.. ..+..++||+|+++.+.+.. ..+..+++.+.++| +|+|
T Consensus 102 ~~~~~D~~~~~-----~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~L-kpgG----- 170 (259)
T 3lpm_A 102 EIIEYDLKKIT-----DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLL-KQGG----- 170 (259)
T ss_dssp EEECSCGGGGG-----GTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHE-EEEE-----
T ss_pred EEEECcHHHhh-----hhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHc-cCCc-----
Confidence 77766654321 12346799999987665544 23567999999999 9988
Q ss_pred CCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEcCCCC
Q 008457 492 QQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWPSKN 529 (564)
Q Consensus 492 ~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~~~~~ 529 (564)
.++++... .....++..+.+.||.+.++..+.+
T Consensus 171 ---~l~~~~~~--~~~~~~~~~l~~~~~~~~~~~~v~~ 203 (259)
T 3lpm_A 171 ---KANFVHRP--ERLLDIIDIMRKYRLEPKRIQFVHP 203 (259)
T ss_dssp ---EEEEEECT--TTHHHHHHHHHHTTEEEEEEEEEES
T ss_pred ---EEEEEEcH--HHHHHHHHHHHHCCCceEEEEEeec
Confidence 78776543 3345688888899999998865533
No 113
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.53 E-value=9.2e-14 Score=133.73 Aligned_cols=106 Identities=14% Similarity=0.145 Sum_probs=88.1
Q ss_pred hccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCcee
Q 008457 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 70 ~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
++...++.+|||||||+|.++..++.+.++++|+|+|+|++|++.|+++....+ .+++++++|+.. + ++++||
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~--l----~d~~FD 190 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV--I----DGLEFD 190 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG--G----GGCCCS
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh--C----CCCCcC
Confidence 455689999999999999887666555568999999999999999999875433 689999999864 2 468999
Q ss_pred EEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEec
Q 008457 149 IVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 149 ~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
+|++... . .+...+++++.++|||||++++...
T Consensus 191 vV~~~a~---~--~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 191 VLMVAAL---A--EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEEECTT---C--SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEEECCC---c--cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 9998654 3 4678899999999999999999763
No 114
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.53 E-value=1.8e-13 Score=126.95 Aligned_cols=134 Identities=11% Similarity=0.059 Sum_probs=104.5
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~ 143 (564)
.+...+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ .+++++++|+... +. .
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-~~---~ 119 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA-LA---D 119 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG-GT---T
T ss_pred HHHHhcCCCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh-cc---c
Confidence 3344555578899999999999999999988 7899999999999999998865433 3799999998652 11 2
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDF 223 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (564)
..+||+|++...+ +.. +++++.++|||||.+++...... +..+
T Consensus 120 ~~~~D~v~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~~~~------------------------------~~~~ 162 (204)
T 3njr_A 120 LPLPEAVFIGGGG------SQA-LYDRLWEWLAPGTRIVANAVTLE------------------------------SETL 162 (204)
T ss_dssp SCCCSEEEECSCC------CHH-HHHHHHHHSCTTCEEEEEECSHH------------------------------HHHH
T ss_pred CCCCCEEEECCcc------cHH-HHHHHHHhcCCCcEEEEEecCcc------------------------------cHHH
Confidence 3579999987743 344 99999999999999998754321 3567
Q ss_pred HHHHHHhCCCcEEEeeeee
Q 008457 224 LTSLFKENGFDVEELGLCC 242 (564)
Q Consensus 224 l~~~l~~aGf~~~~~~~~~ 242 (564)
+.+.+++.||++..+....
T Consensus 163 ~~~~l~~~g~~i~~i~~~~ 181 (204)
T 3njr_A 163 LTQLHARHGGQLLRIDIAQ 181 (204)
T ss_dssp HHHHHHHHCSEEEEEEEEE
T ss_pred HHHHHHhCCCcEEEEEeec
Confidence 7788999999888765543
No 115
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.53 E-value=5.3e-14 Score=135.60 Aligned_cols=137 Identities=18% Similarity=0.229 Sum_probs=98.1
Q ss_pred hHHHHHHh---hccccccccchhHHHHhhhccCCCCCeEEEEcCCccc----cHHHHHHhCC----CcEEEEEeCChHHH
Q 008457 44 YWDLFYKR---HQDRFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGN----TIFPLIAAYP----DVFVYACDFSPRAV 112 (564)
Q Consensus 44 ywd~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~VLDiGcG~G~----~~~~l~~~~~----~~~v~~iD~s~~~l 112 (564)
-|+.+... +...|+++...+...-..+++..++.+|||+|||+|. ++..|++..+ +.+|+|+|+|+.|+
T Consensus 71 e~~~l~~~lt~~~t~FfRd~~~f~~l~~~llp~~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L 150 (274)
T 1af7_A 71 EWQAFINALTTNLTAFFREAHHFPILAEHARRRHGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVL 150 (274)
T ss_dssp HHHHHHHHHCCCCCCTTTTTTHHHHHHHHHHHSCSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHH
T ss_pred HHHHHHHHHhhcCccccCChHHHHHHHHHccCCCCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHH
Confidence 35555433 2344666545432222223332346899999999998 5555666533 46999999999999
Q ss_pred HHHHhcccc-----------------------c---------CCCeeEEEecCCcccccCCCC-CCceeEEEEcccccCC
Q 008457 113 NLVMTHKDF-----------------------T---------ETRVSTFVCDLISDDLSRQIS-PSSIDIVTMVFVLSAV 159 (564)
Q Consensus 113 ~~a~~~~~~-----------------------~---------~~~i~~~~~d~~~~~~~~~~~-~~~fD~V~~~~vl~~~ 159 (564)
+.|++.... . ..++.|.+.|+... +++ .++||+|+|..+++|+
T Consensus 151 ~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~----~~~~~~~fDlI~crnvliyf 226 (274)
T 1af7_A 151 EKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEK----QYNVPGPFDAIFCRNVMIYF 226 (274)
T ss_dssp HHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCS----SCCCCCCEEEEEECSSGGGS
T ss_pred HHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCC----CCCcCCCeeEEEECCchHhC
Confidence 999986310 0 03688999998653 233 5789999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCeEEEEE
Q 008457 160 SPEKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 160 ~~~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
+++...++++++++.|+|||+|++.
T Consensus 227 ~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 227 DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 8778899999999999999999983
No 116
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.52 E-value=2.5e-14 Score=134.03 Aligned_cols=112 Identities=14% Similarity=0.193 Sum_probs=89.5
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
.++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.|+++....+ .++.++++|+... ++..+++++||.|++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~-l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV-LHKMIPDNSLRMVQL 111 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH-HHHHSCTTCEEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH-HHHHcCCCChheEEE
Confidence 47789999999999999999999999999999999999999998865433 5799999998542 111257889999999
Q ss_pred cccccCCChhHH------HHHHHHHHhccCCCeEEEEEec
Q 008457 153 VFVLSAVSPEKM------SLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 153 ~~vl~~~~~~~~------~~~l~~~~r~LkpgG~lii~~~ 186 (564)
++...+...... ..+++++.++|||||.+++.+.
T Consensus 112 ~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 112 FFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp ESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred eCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 865554422221 2599999999999999998753
No 117
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.52 E-value=1.5e-14 Score=136.27 Aligned_cols=165 Identities=13% Similarity=0.188 Sum_probs=102.6
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCC-hHHHHHH---HhcccccC-CCeeEEEecCCccccc
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFS-PRAVNLV---MTHKDFTE-TRVSTFVCDLISDDLS 139 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s-~~~l~~a---~~~~~~~~-~~i~~~~~d~~~~~~~ 139 (564)
..+.+... .++.+|||||||+|.++..+++..++.+|+|+|+| +.|++.| +++....+ .++.+.++|+... +
T Consensus 15 ~~~~~~~~-~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l--~ 91 (225)
T 3p2e_A 15 DELTEIIG-QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL--P 91 (225)
T ss_dssp HHHHHHHT-TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC--C
T ss_pred HHHHHHhC-CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh--h
Confidence 44444443 67889999999999999999988889999999999 6777776 76654433 4789999998643 1
Q ss_pred CCCCCCceeEEEEcccccCCC---hhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCcee
Q 008457 140 RQISPSSIDIVTMVFVLSAVS---PEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRA 216 (564)
Q Consensus 140 ~~~~~~~fD~V~~~~vl~~~~---~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (564)
..+ .+.+|.|+++....+.. ..+...++++++|+|||||.+++............+. ... +. .....
T Consensus 92 ~~~-~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~------~~~-~~--~~~~~ 161 (225)
T 3p2e_A 92 FEL-KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIK------KRG-LP--LLSKA 161 (225)
T ss_dssp GGG-TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC-----------------------CCHH
T ss_pred hhc-cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhh------hcC-CC--CCChh
Confidence 111 24566666544322110 0123468999999999999999843222111000000 000 00 00111
Q ss_pred eccCHHHHHHHHHhCCCcEEEeeeeec
Q 008457 217 FYFSNDFLTSLFKENGFDVEELGLCCK 243 (564)
Q Consensus 217 ~~~~~~~l~~~l~~aGf~~~~~~~~~~ 243 (564)
++..+++..+++++||++........
T Consensus 162 -~~~~~el~~~l~~aGf~v~~~~~~~~ 187 (225)
T 3p2e_A 162 -YFLSEQYKAELSNSGFRIDDVKELDN 187 (225)
T ss_dssp -HHHSHHHHHHHHHHTCEEEEEEEECH
T ss_pred -hcchHHHHHHHHHcCCCeeeeeecCH
Confidence 22234599999999999988766543
No 118
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.52 E-value=1.8e-13 Score=133.18 Aligned_cols=152 Identities=9% Similarity=0.051 Sum_probs=119.6
Q ss_pred echhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEe
Q 008457 357 LWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 436 (564)
Q Consensus 357 ~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l 436 (564)
..++...+.+.+.....+.++.+|||+|||+|.++..++.....+|+++|+++.+++.+++++..+++. .++.+...
T Consensus 42 ~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~~~~~~~ 118 (273)
T 3bus_A 42 VDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLA---NRVTFSYA 118 (273)
T ss_dssp HHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCC---cceEEEEC
Confidence 334555677777776666688999999999998888877766779999999999999999999887764 46777777
Q ss_pred ecCCCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc------------
Q 008457 437 EWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ------------ 504 (564)
Q Consensus 437 ~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~------------ 504 (564)
|+.+. ++++++||+|++.+++++..+...+++.+.++| +|+| .++++.....
T Consensus 119 d~~~~-------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L-~pgG--------~l~i~~~~~~~~~~~~~~~~~~ 182 (273)
T 3bus_A 119 DAMDL-------PFEDASFDAVWALESLHHMPDRGRALREMARVL-RPGG--------TVAIADFVLLAPVEGAKKEAVD 182 (273)
T ss_dssp CTTSC-------CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTE-EEEE--------EEEEEEEEESSCCCHHHHHHHH
T ss_pred ccccC-------CCCCCCccEEEEechhhhCCCHHHHHHHHHHHc-CCCe--------EEEEEEeeccCCCChhHHHHHH
Confidence 76543 234578999999999999999999999999999 9988 7776653321
Q ss_pred -----------CChhHHHHHHHHcCCeEEEEcCC
Q 008457 505 -----------VDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 505 -----------~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
.+...+.+.++++||+++++...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 183 AFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDI 216 (273)
T ss_dssp HHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEEC
Confidence 12345677888999999987644
No 119
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.51 E-value=3e-14 Score=135.49 Aligned_cols=157 Identities=17% Similarity=0.223 Sum_probs=109.9
Q ss_pred CCCCeEEEEcCCc--cccHHHHHH-hCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccc--cCCCCCCce
Q 008457 74 AGRKDVLEVGCGA--GNTIFPLIA-AYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDL--SRQISPSSI 147 (564)
Q Consensus 74 ~~~~~VLDiGcG~--G~~~~~l~~-~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~--~~~~~~~~f 147 (564)
....+|||||||+ +.++..+++ ..|+.+|+++|.|+.|++.|+++..... .++.|+++|+..... ..+...+.|
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 4557899999997 445555554 4789999999999999999998875432 479999999976421 001002334
Q ss_pred e-----EEEEcccccCCChhH-HHHHHHHHHhccCCCeEEEEEecCCCchhh--hhhcccccccccceeecCCCceeecc
Q 008457 148 D-----IVTMVFVLSAVSPEK-MSLVLQNIKKVLKPTGYVLFRDYAIGDLAQ--ERLTGKDQKISENFYVRGDGTRAFYF 219 (564)
Q Consensus 148 D-----~V~~~~vl~~~~~~~-~~~~l~~~~r~LkpgG~lii~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (564)
| .|+++.+|||+++.+ +..+++++.+.|+|||+|++++........ ..+.. .+. ..+....+.
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~--------~~~-~~g~p~~~r 227 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAR--------EYA-ARNMPMRLR 227 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHH--------HHH-HTTCCCCCC
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHH--------HHH-hcCCCCccC
Confidence 4 688999999998544 789999999999999999999876542111 11110 000 112223457
Q ss_pred CHHHHHHHHHhCCCcEEEeeee
Q 008457 220 SNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 220 ~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
+.+++..+|. ||++++-...
T Consensus 228 s~~ei~~~f~--GlelvePG~v 247 (277)
T 3giw_A 228 THAEAEEFFE--GLELVEPGIV 247 (277)
T ss_dssp CHHHHHHTTT--TSEECTTCSE
T ss_pred CHHHHHHHhC--CCcccCCcEe
Confidence 9999999994 9998775544
No 120
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.51 E-value=1.7e-13 Score=127.47 Aligned_cols=99 Identities=13% Similarity=0.108 Sum_probs=83.4
Q ss_pred CCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
++.+|||+|||+|.++..++...|+.+++++|+|+.+++.|+++....+ .++++.++|+.... +.++||+|+++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-----SEPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-----CCSCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-----ccCCcCEEEEe
Confidence 4789999999999999999998888999999999999999998765433 35899999986421 45789999985
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEE
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
.+ .++..+++++.++|+|||.+++.
T Consensus 140 ~~------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 140 AF------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CS------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred cc------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 43 24678999999999999999986
No 121
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.51 E-value=1.1e-13 Score=130.94 Aligned_cols=144 Identities=16% Similarity=0.238 Sum_probs=102.9
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCcee
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
+.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|+++.... .++.++.+|+.......+++ ++||
T Consensus 68 ~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D 145 (230)
T 1fbn_A 68 KVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVD 145 (230)
T ss_dssp CCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEE
T ss_pred cccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEE
Confidence 334446789999999999999999999866679999999999999998876544 68999999986522112344 7899
Q ss_pred EEEEcccccCCC-hhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHH
Q 008457 149 IVTMVFVLSAVS-PEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSL 227 (564)
Q Consensus 149 ~V~~~~vl~~~~-~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 227 (564)
+|+ ++++ +.....+++++.++|||||.+++. +..... . .......+..+++. +
T Consensus 146 ~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~---~----------------~~~~~~~~~~~~l~-~ 199 (230)
T 1fbn_A 146 VIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSI---D----------------VTKDPKEIFKEQKE-I 199 (230)
T ss_dssp EEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGT---C----------------SSSCHHHHHHHHHH-H
T ss_pred EEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCC---C----------------CCCCHHHhhHHHHH-H
Confidence 999 3443 234467899999999999999996 211000 0 00000012347777 8
Q ss_pred HHhCCCcEEEeee
Q 008457 228 FKENGFDVEELGL 240 (564)
Q Consensus 228 l~~aGf~~~~~~~ 240 (564)
++++||++++...
T Consensus 200 l~~~Gf~~~~~~~ 212 (230)
T 1fbn_A 200 LEAGGFKIVDEVD 212 (230)
T ss_dssp HHHHTEEEEEEEE
T ss_pred HHHCCCEEEEEEc
Confidence 9999998876543
No 122
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.51 E-value=3.1e-13 Score=129.90 Aligned_cols=142 Identities=16% Similarity=0.173 Sum_probs=110.7
Q ss_pred HhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhh
Q 008457 368 LARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAI 447 (564)
Q Consensus 368 l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~ 447 (564)
+.......++.+|||||||+|.++..++..+..+|+++|+++.+++.++++.. ..++.+...|..+.
T Consensus 36 l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~------ 102 (253)
T 3g5l_A 36 LKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDI------ 102 (253)
T ss_dssp HHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGC------
T ss_pred HHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhC------
Confidence 33444445789999999999988888887776699999999999999998865 14566666665422
Q ss_pred hhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec------------------------
Q 008457 448 KEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------------------ 503 (564)
Q Consensus 448 ~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r------------------------ 503 (564)
++++++||+|+++.++++..+...+++.+.++| +|+| .++++....
T Consensus 103 -~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (253)
T 3g5l_A 103 -AIEPDAYNVVLSSLALHYIASFDDICKKVYINL-KSSG--------SFIFSVEHPVFTADGRQDWYTDETGNKLHWPVD 172 (253)
T ss_dssp -CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE-EEEE--------EEEEEEECHHHHSSSSCSCEECSSCCEEEEEEC
T ss_pred -CCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHc-CCCc--------EEEEEeCCCccccCccccceeccCCceEEEEec
Confidence 234679999999999999999999999999999 9988 777763210
Q ss_pred --------------------cCChhHHHHHHHHcCCeEEEEcCCCCCCC
Q 008457 504 --------------------QVDEPSMLSAATQCGFRLVDKWPSKNSAS 532 (564)
Q Consensus 504 --------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 532 (564)
..+...+.+.+.++||+++++.+...+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~~~~ 221 (253)
T 3g5l_A 173 RYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAPE 221 (253)
T ss_dssp CTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCCCCGG
T ss_pred cccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCCCchh
Confidence 01456788999999999999987655544
No 123
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.51 E-value=8.2e-14 Score=125.28 Aligned_cols=122 Identities=17% Similarity=0.175 Sum_probs=98.7
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||+|||+|.++..+++. + +|+|+|+|+.|++. ..++++.++|+.. ++++++||+|+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~--~-~v~gvD~s~~~~~~--------~~~~~~~~~d~~~-----~~~~~~fD~i~~n 85 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR--N-TVVSTDLNIRALES--------HRGGNLVRADLLC-----SINQESVDVVVFN 85 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT--S-EEEEEESCHHHHHT--------CSSSCEEECSTTT-----TBCGGGCSEEEEC
T ss_pred CCCCeEEEeccCccHHHHHHHhc--C-cEEEEECCHHHHhc--------ccCCeEEECChhh-----hcccCCCCEEEEC
Confidence 56779999999999999999888 4 99999999999987 3468899999864 3355899999999
Q ss_pred ccccCCChh-------HHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHH
Q 008457 154 FVLSAVSPE-------KMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTS 226 (564)
Q Consensus 154 ~vl~~~~~~-------~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 226 (564)
..+++.+.. +...+++++.+.| |||.+++..... ...+++.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~------------------------------~~~~~l~~ 134 (170)
T 3q87_B 86 PPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA------------------------------NRPKEVLA 134 (170)
T ss_dssp CCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG------------------------------GCHHHHHH
T ss_pred CCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC------------------------------CCHHHHHH
Confidence 888875422 3467889999999 999999875321 25788999
Q ss_pred HHHhCCCcEEEeeeee
Q 008457 227 LFKENGFDVEELGLCC 242 (564)
Q Consensus 227 ~l~~aGf~~~~~~~~~ 242 (564)
+++++||+.+.+....
T Consensus 135 ~l~~~gf~~~~~~~~~ 150 (170)
T 3q87_B 135 RLEERGYGTRILKVRK 150 (170)
T ss_dssp HHHHTTCEEEEEEEEE
T ss_pred HHHHCCCcEEEEEeec
Confidence 9999999988765544
No 124
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.51 E-value=1.3e-13 Score=134.32 Aligned_cols=129 Identities=16% Similarity=0.278 Sum_probs=103.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
.++.+|||+|||+|..+..++...|+.+|+++|+|+.+++.|+++....+ .++.+.++|+... ++.++||+|++
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-----~~~~~fD~Iv~ 182 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-----LAGQQFAMIVS 182 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-----GTTCCEEEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-----cccCCccEEEE
Confidence 56789999999999999999988888999999999999999998865433 3689999998642 34678999999
Q ss_pred cc-------------cccCCCh----------hHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceee
Q 008457 153 VF-------------VLSAVSP----------EKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYV 209 (564)
Q Consensus 153 ~~-------------vl~~~~~----------~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (564)
+. +++|.|. +....+++++.++|+|||++++...
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~----------------------- 239 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG----------------------- 239 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC-----------------------
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC-----------------------
Confidence 83 4444331 4568899999999999999998521
Q ss_pred cCCCceeeccCHHHHHHHHHhCCCcEEEe
Q 008457 210 RGDGTRAFYFSNDFLTSLFKENGFDVEEL 238 (564)
Q Consensus 210 ~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 238 (564)
+.+.+++.++++++||..+..
T Consensus 240 --------~~~~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 240 --------WQQGEAVRQAFILAGYHDVET 260 (276)
T ss_dssp --------SSCHHHHHHHHHHTTCTTCCE
T ss_pred --------chHHHHHHHHHHHCCCcEEEE
Confidence 125788999999999986654
No 125
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.50 E-value=1.9e-13 Score=132.63 Aligned_cols=136 Identities=13% Similarity=0.140 Sum_probs=109.9
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.+.++.+|||||||+|.++..++..+..+|+++|+++.+++.+++++..+++. +++.+...|+.+. +++.
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-------~~~~ 112 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQ---NRVTGIVGSMDDL-------PFRN 112 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEECCTTSC-------CCCT
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCC---cCcEEEEcChhhC-------CCCC
Confidence 35678999999999998888888776669999999999999999999988764 5688888877543 2345
Q ss_pred CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc-------------------CChhHHHHH
Q 008457 453 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------------VDEPSMLSA 513 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~-------------------~~~~~~~~~ 513 (564)
++||+|++..++++. ....+++.+.++| +|+| .++++..... .+...+.+.
T Consensus 113 ~~fD~i~~~~~~~~~-~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (267)
T 3kkz_A 113 EELDLIWSEGAIYNI-GFERGLNEWRKYL-KKGG--------YLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAK 182 (267)
T ss_dssp TCEEEEEESSCGGGT-CHHHHHHHHGGGE-EEEE--------EEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHH
T ss_pred CCEEEEEEcCCceec-CHHHHHHHHHHHc-CCCC--------EEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHH
Confidence 799999999999888 8999999999999 9988 7777654311 122356688
Q ss_pred HHHcCCeEEEEcCCC
Q 008457 514 ATQCGFRLVDKWPSK 528 (564)
Q Consensus 514 ~~~~g~~~~~~~~~~ 528 (564)
+.++||+++++....
T Consensus 183 l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 183 IHKAGYLPVATFILP 197 (267)
T ss_dssp HHHTTEEEEEEEECC
T ss_pred HHHCCCEEEEEEECC
Confidence 889999999987553
No 126
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.50 E-value=1.2e-13 Score=133.06 Aligned_cols=141 Identities=14% Similarity=0.144 Sum_probs=111.1
Q ss_pred HHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccc
Q 008457 365 AAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 444 (564)
Q Consensus 365 ~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~ 444 (564)
.+.+.....+.++.+|||+|||+|.++..++...+.+|+++|+++.+++.+++++..+++. .++.+...|+.+.
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---~~v~~~~~d~~~~--- 98 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVS---ERVHFIHNDAAGY--- 98 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEESCCTTC---
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC---cceEEEECChHhC---
Confidence 4444444445688899999999998888777766679999999999999999999887764 4688887777543
Q ss_pred hhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------------c
Q 008457 445 EAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR--------------------Q 504 (564)
Q Consensus 445 ~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r--------------------~ 504 (564)
+. +++||+|++..++++..+...+++.+.++| +|+| .++++.... .
T Consensus 99 ----~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (256)
T 1nkv_A 99 ----VA-NEKCDVAACVGATWIAGGFAGAEELLAQSL-KPGG--------IMLIGEPYWRQLPATEEIAQACGVSSTSDF 164 (256)
T ss_dssp ----CC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSE-EEEE--------EEEEEEEEETTCCSSHHHHHTTTCSCGGGS
T ss_pred ----Cc-CCCCCEEEECCChHhcCCHHHHHHHHHHHc-CCCe--------EEEEecCcccCCCChHHHHHHHhccccccc
Confidence 12 468999999999999989999999999999 9988 777765431 1
Q ss_pred CChhHHHHHHHHcCCeEEEEc
Q 008457 505 VDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 505 ~~~~~~~~~~~~~g~~~~~~~ 525 (564)
.+...+.+.+.++||.+.++.
T Consensus 165 ~~~~~~~~~l~~aGf~~~~~~ 185 (256)
T 1nkv_A 165 LTLPGLVGAFDDLGYDVVEMV 185 (256)
T ss_dssp CCHHHHHHHHHTTTBCCCEEE
T ss_pred CCHHHHHHHHHHCCCeeEEEE
Confidence 123467788889999988764
No 127
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.49 E-value=4.1e-13 Score=129.35 Aligned_cols=144 Identities=11% Similarity=0.108 Sum_probs=113.1
Q ss_pred HHHHhcC-CCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCcc
Q 008457 365 AAVLARN-PTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 443 (564)
Q Consensus 365 ~~~l~~~-~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~ 443 (564)
...+... ..+.++.+|||||||+|.++..++..+..+|+++|+++.+++.+++|+..+++. +++.+...|+.+.
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~~-- 108 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCA---DRVKGITGSMDNL-- 108 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEECCTTSC--
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCC---CceEEEECChhhC--
Confidence 4444433 355578899999999998888888877669999999999999999999988874 5688887777433
Q ss_pred chhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-------------------c
Q 008457 444 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-------------------Q 504 (564)
Q Consensus 444 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-------------------~ 504 (564)
++++++||+|++..++++. +...+++.+.++| +|+| .++++.... .
T Consensus 109 -----~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (257)
T 3f4k_A 109 -----PFQNEELDLIWSEGAIYNI-GFERGMNEWSKYL-KKGG--------FIAVSEASWFTSERPAEIEDFWMDAYPEI 173 (257)
T ss_dssp -----SSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTE-EEEE--------EEEEEEEEESSSCCCHHHHHHHHHHCTTC
T ss_pred -----CCCCCCEEEEEecChHhhc-CHHHHHHHHHHHc-CCCc--------EEEEEEeeccCCCChHHHHHHHHHhCCCC
Confidence 2345799999999999988 7999999999999 9988 777775431 1
Q ss_pred CChhHHHHHHHHcCCeEEEEcCCC
Q 008457 505 VDEPSMLSAATQCGFRLVDKWPSK 528 (564)
Q Consensus 505 ~~~~~~~~~~~~~g~~~~~~~~~~ 528 (564)
.+...+.+.+.++||++++.....
T Consensus 174 ~~~~~~~~~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 174 SVIPTCIDKMERAGYTPTAHFILP 197 (257)
T ss_dssp CBHHHHHHHHHHTTEEEEEEEECC
T ss_pred CCHHHHHHHHHHCCCeEEEEEECC
Confidence 123456788889999999987553
No 128
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.49 E-value=2.1e-13 Score=132.09 Aligned_cols=148 Identities=17% Similarity=0.225 Sum_probs=116.3
Q ss_pred echhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEe
Q 008457 357 LWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 436 (564)
Q Consensus 357 ~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l 436 (564)
.++.+..+++.+.....+.++.+|||+|||+|.++..++.....+|+++|+++.+++.+++++..+ .++.+...
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~ 109 (266)
T 3ujc_A 36 ISSGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN------NKIIFEAN 109 (266)
T ss_dssp CSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC------TTEEEEEC
T ss_pred cccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC------CCeEEEEC
Confidence 345556667777777667788999999999998888777765679999999999999999876543 45777777
Q ss_pred ecCCCccchhhhhhcCCCccEEEEeceeeCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc----------
Q 008457 437 EWGNRDHIEAIKEENNEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ---------- 504 (564)
Q Consensus 437 ~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~--~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~---------- 504 (564)
|+.+. ++++++||+|++..++++. .+...+++.+.++| +|+| .+++......
T Consensus 110 d~~~~-------~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~~ 173 (266)
T 3ujc_A 110 DILTK-------EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWL-KPTG--------TLLITDYCATEKENWDDEFK 173 (266)
T ss_dssp CTTTC-------CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEEEEESCGGGCCHHHH
T ss_pred ccccC-------CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHc-CCCC--------EEEEEEeccCCcccchHHHH
Confidence 66543 2346799999999999998 89999999999999 9988 7777654322
Q ss_pred ----------CChhHHHHHHHHcCCeEEEEcC
Q 008457 505 ----------VDEPSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 505 ----------~~~~~~~~~~~~~g~~~~~~~~ 526 (564)
.+...+.+.+.++||+++++..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 174 EYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp HHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 2345677888899999988763
No 129
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.49 E-value=1.1e-13 Score=133.12 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=100.4
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++....+..+++.++|+... ++.++||+|+++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g--~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-----~~~~~fD~Vv~n 191 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLG--GKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-----LPFGPFDLLVAN 191 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-----GGGCCEEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhC--CeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-----CcCCCCCEEEEC
Confidence 578999999999999999988874 4999999999999999988654443488888887542 345789999997
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCCC
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENGF 233 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 233 (564)
...+ .+..++.++.++|||||+++++.... .+.+++.+.++++||
T Consensus 192 ~~~~-----~~~~~l~~~~~~LkpgG~lils~~~~------------------------------~~~~~v~~~l~~~Gf 236 (254)
T 2nxc_A 192 LYAE-----LHAALAPRYREALVPGGRALLTGILK------------------------------DRAPLVREAMAGAGF 236 (254)
T ss_dssp CCHH-----HHHHHHHHHHHHEEEEEEEEEEEEEG------------------------------GGHHHHHHHHHHTTC
T ss_pred CcHH-----HHHHHHHHHHHHcCCCCEEEEEeecc------------------------------CCHHHHHHHHHHCCC
Confidence 5543 45689999999999999999964321 146788999999999
Q ss_pred cEEEeee
Q 008457 234 DVEELGL 240 (564)
Q Consensus 234 ~~~~~~~ 240 (564)
+++....
T Consensus 237 ~~~~~~~ 243 (254)
T 2nxc_A 237 RPLEEAA 243 (254)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9876543
No 130
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.48 E-value=7.8e-14 Score=131.72 Aligned_cols=119 Identities=15% Similarity=0.210 Sum_probs=96.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCC-CCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQIS-PSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~-~~~fD~V~~ 152 (564)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++ ..+++++++|+... .+++ +++||+|++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~~---~~~~~~~~fD~v~~ 117 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN----APHADVYEWNGKGE---LPAGLGAPFGLIVS 117 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH----CTTSEEEECCSCSS---CCTTCCCCEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh----CCCceEEEcchhhc---cCCcCCCCEEEEEe
Confidence 67899999999999999999988 67999999999999999987 34789999998532 2456 789999999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENG 232 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 232 (564)
+. ++..+++++.++|||||.++... .+.+.+.+.+.++++|
T Consensus 118 ~~--------~~~~~l~~~~~~LkpgG~l~~~~-------------------------------~~~~~~~~~~~l~~~G 158 (226)
T 3m33_A 118 RR--------GPTSVILRLPELAAPDAHFLYVG-------------------------------PRLNVPEVPERLAAVG 158 (226)
T ss_dssp ES--------CCSGGGGGHHHHEEEEEEEEEEE-------------------------------SSSCCTHHHHHHHHTT
T ss_pred CC--------CHHHHHHHHHHHcCCCcEEEEeC-------------------------------CcCCHHHHHHHHHHCC
Confidence 72 34568999999999999998110 0125677899999999
Q ss_pred CcEEEeee
Q 008457 233 FDVEELGL 240 (564)
Q Consensus 233 f~~~~~~~ 240 (564)
|.......
T Consensus 159 f~~~~~~~ 166 (226)
T 3m33_A 159 WDIVAEDH 166 (226)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 99876544
No 131
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.48 E-value=5.5e-13 Score=132.40 Aligned_cols=142 Identities=9% Similarity=0.051 Sum_probs=112.2
Q ss_pred HHHhcCCC-CCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccc
Q 008457 366 AVLARNPT-IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 444 (564)
Q Consensus 366 ~~l~~~~~-~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~ 444 (564)
+++..... +.++.+|||+|||+|.++..++...+.+|+++|+++.+++.+++|+..+++. .++.+...|..+.
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--- 179 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRID---DHVRSRVCNMLDT--- 179 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEECCTTSC---
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC---CceEEEECChhcC---
Confidence 45555544 6678899999999998888777764678999999999999999999998864 4678877776543
Q ss_pred hhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccC-------------------
Q 008457 445 EAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQV------------------- 505 (564)
Q Consensus 445 ~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~------------------- 505 (564)
++++++||+|++.+++.+. ....+++.+.++| +|+| .++++......
T Consensus 180 ----~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 3vc1_A 180 ----PFDKGAVTASWNNESTMYV-DLHDLFSEHSRFL-KVGG--------RYVTITGCWNPRYGQPSKWVSQINAHFECN 245 (312)
T ss_dssp ----CCCTTCEEEEEEESCGGGS-CHHHHHHHHHHHE-EEEE--------EEEEEEEEECTTTCSCCHHHHHHHHHHTCC
T ss_pred ----CCCCCCEeEEEECCchhhC-CHHHHHHHHHHHc-CCCc--------EEEEEEccccccccchhHHHHHHHhhhcCC
Confidence 2345799999999999888 5999999999999 9988 67666543221
Q ss_pred --ChhHHHHHHHHcCCeEEEEcCC
Q 008457 506 --DEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 506 --~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
+...+.+.++++||+++++...
T Consensus 246 ~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 246 IHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp CCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred CCCHHHHHHHHHHCCCEEEEEEeC
Confidence 2345678888999999988654
No 132
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.48 E-value=2.3e-13 Score=130.06 Aligned_cols=136 Identities=14% Similarity=0.057 Sum_probs=103.0
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
.++.+|||||||+|..+..++..+|+.+|+++|+|+.+++.|+++....+ .+++++++|+...... +...++||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~-~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLARE-AGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTS-TTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcc-cccCCCceEEEE
Confidence 56889999999999999999999889999999999999999998875444 3699999998543210 113478999999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENG 232 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 232 (564)
..+ .++..+++.+.++|||||.+++..-..... ...++.+.++..|
T Consensus 158 ~a~------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~----------------------------e~~~~~~~l~~~G 203 (249)
T 3g89_A 158 RAV------APLCVLSELLLPFLEVGGAAVAMKGPRVEE----------------------------ELAPLPPALERLG 203 (249)
T ss_dssp ESS------CCHHHHHHHHGGGEEEEEEEEEEECSCCHH----------------------------HHTTHHHHHHHHT
T ss_pred CCc------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHH----------------------------HHHHHHHHHHHcC
Confidence 754 245679999999999999998754221110 1344567788889
Q ss_pred CcEEEeeeeecc
Q 008457 233 FDVEELGLCCKQ 244 (564)
Q Consensus 233 f~~~~~~~~~~~ 244 (564)
|.+..+.....+
T Consensus 204 ~~~~~~~~~~~p 215 (249)
T 3g89_A 204 GRLGEVLALQLP 215 (249)
T ss_dssp EEEEEEEEEECT
T ss_pred CeEEEEEEeeCC
Confidence 998876555433
No 133
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.48 E-value=1e-13 Score=130.00 Aligned_cols=142 Identities=14% Similarity=0.131 Sum_probs=109.4
Q ss_pred HHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCcc
Q 008457 364 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 443 (564)
Q Consensus 364 l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~ 443 (564)
+++.+.......++ +|||+|||+|.++..++.....+|+++|+++.+++.+++++..++.. .++.+...|..+.
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~~-- 105 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLN---DRIQIVQGDVHNI-- 105 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEECBTTBC--
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhcccc---CceEEEEcCHHHC--
Confidence 34444443233234 99999999998888777765569999999999999999999988764 4678777776543
Q ss_pred chhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee---------------------
Q 008457 444 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF--------------------- 502 (564)
Q Consensus 444 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~--------------------- 502 (564)
++++++||+|+++.++++..+...+++.+.++| +|+| .++++...
T Consensus 106 -----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (219)
T 3dlc_A 106 -----PIEDNYADLIVSRGSVFFWEDVATAFREIYRIL-KSGG--------KTYIGGGFGNKELRDSISAEMIRKNPDWK 171 (219)
T ss_dssp -----SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE-EEEE--------EEEEEECCSSHHHHHHHHHHHHHHCTTHH
T ss_pred -----CCCcccccEEEECchHhhccCHHHHHHHHHHhC-CCCC--------EEEEEeccCcHHHHHHHHHHHHHhHHHHH
Confidence 235679999999999999999999999999999 9988 77776322
Q ss_pred -------ccCChhHHHHHHHHcCCeEEEEc
Q 008457 503 -------RQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 503 -------r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
+..+...+.+.++++||++.++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 172 EFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp HHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred hhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 11122466788889999988876
No 134
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.47 E-value=5e-13 Score=131.78 Aligned_cols=148 Identities=12% Similarity=0.127 Sum_probs=113.6
Q ss_pred HHHHHHHHhcCC----CCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEe
Q 008457 361 AHLMAAVLARNP----TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 436 (564)
Q Consensus 361 ~~~l~~~l~~~~----~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l 436 (564)
...+.+.+.... .+.++.+|||+|||+|.++..++...+.+|+++|+++.+++.+++++...++. .++.+...
T Consensus 63 ~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~~~~~~~ 139 (297)
T 2o57_A 63 SLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLA---DNITVKYG 139 (297)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCT---TTEEEEEC
T ss_pred HHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCC---cceEEEEc
Confidence 333444444433 55678899999999998887777764569999999999999999999887764 46777777
Q ss_pred ecCCCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc------------
Q 008457 437 EWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ------------ 504 (564)
Q Consensus 437 ~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~------------ 504 (564)
|+.+. ++++++||+|++.+++++..+...+++.+.++| +|+| .++++.....
T Consensus 140 d~~~~-------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~ 203 (297)
T 2o57_A 140 SFLEI-------PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVL-KPRG--------VMAITDPMKEDGIDKSSIQPIL 203 (297)
T ss_dssp CTTSC-------SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE-EEEE--------EEEEEEEEECTTCCGGGGHHHH
T ss_pred CcccC-------CCCCCCEeEEEecchhhhcCCHHHHHHHHHHHc-CCCe--------EEEEEEeccCCCCchHHHHHHH
Confidence 76543 345679999999999999999999999999999 9988 7777654321
Q ss_pred --------CChhHHHHHHHHcCCeEEEEcCC
Q 008457 505 --------VDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 505 --------~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
.+...+.+.+.++||+++++...
T Consensus 204 ~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 204 DRIKLHDMGSLGLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp HHHTCSSCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHhcCCCCCCHHHHHHHHHHCCCeEEEEEEC
Confidence 12335567788999999988643
No 135
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.47 E-value=8.9e-13 Score=125.59 Aligned_cols=146 Identities=10% Similarity=0.080 Sum_probs=112.9
Q ss_pred eechhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEE
Q 008457 356 MLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKR 435 (564)
Q Consensus 356 ~~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~ 435 (564)
..|+++..+.+.+. +.++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++..++. .++.+..
T Consensus 5 ~~~~~~~~~~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~----~~v~~~~ 75 (239)
T 1xxl_A 5 HHHHSLGLMIKTAE----CRAEHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQEKGV----ENVRFQQ 75 (239)
T ss_dssp -CHHHHHHHHHHHT----CCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHTC----CSEEEEE
T ss_pred ccCCCcchHHHHhC----cCCCCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCC----CCeEEEe
Confidence 35677766666664 3477899999999997777776655 5999999999999999999988775 3577776
Q ss_pred eecCCCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec------------
Q 008457 436 LEWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------ 503 (564)
Q Consensus 436 l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r------------ 503 (564)
.|+.+. ++.+++||+|+++.++++..+...+++.+.++| +|+| .+++.....
T Consensus 76 ~d~~~~-------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~ 139 (239)
T 1xxl_A 76 GTAESL-------PFPDDSFDIITCRYAAHHFSDVRKAVREVARVL-KQDG--------RFLLVDHYAPEDPVLDEFVNH 139 (239)
T ss_dssp CBTTBC-------CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE-EEEE--------EEEEEEECBCSSHHHHHHHHH
T ss_pred cccccC-------CCCCCcEEEEEECCchhhccCHHHHHHHHHHHc-CCCc--------EEEEEEcCCCCChhHHHHHHH
Confidence 666432 234578999999999999999999999999999 9988 777654321
Q ss_pred -----------cCChhHHHHHHHHcCCeEEEEcC
Q 008457 504 -----------QVDEPSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 504 -----------~~~~~~~~~~~~~~g~~~~~~~~ 526 (564)
..+...+.+.+.++||.+.++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 173 (239)
T 1xxl_A 140 LNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQK 173 (239)
T ss_dssp HHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHhccccccCCCCHHHHHHHHHHCCCcEEEEEe
Confidence 12334677888899999888753
No 136
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.47 E-value=3.4e-13 Score=126.59 Aligned_cols=134 Identities=13% Similarity=0.027 Sum_probs=108.4
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 451 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~ 451 (564)
..++.+|||+|||+|.++..++..+ ..+|+++|+++.+++.+++++..++. .++.+...|..+. ++.
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~d~~~~-------~~~ 103 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL----KNVEVLKSEENKI-------PLP 103 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC----TTEEEEECBTTBC-------SSC
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC----CcEEEEecccccC-------CCC
Confidence 3467899999999998888777764 45999999999999999999988776 3577777766532 234
Q ss_pred CCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee-----------ccCChhHHHHHHHHcCCe
Q 008457 452 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF-----------RQVDEPSMLSAATQCGFR 520 (564)
Q Consensus 452 ~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~-----------r~~~~~~~~~~~~~~g~~ 520 (564)
.++||+|+++.++++..+...+++.+.++| +|+| .++++... +..+...+.+.+.++||+
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 174 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVA-KPFA--------YLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIR 174 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHE-EEEE--------EEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCE
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHh-CCCe--------EEEEEEecccccccCCchhcccCHHHHHHHHHHCCCE
Confidence 578999999999999999999999999999 9988 77776533 223446788899999999
Q ss_pred EEEEcCC
Q 008457 521 LVDKWPS 527 (564)
Q Consensus 521 ~~~~~~~ 527 (564)
+.++...
T Consensus 175 ~~~~~~~ 181 (219)
T 3dh0_A 175 VGRVVEV 181 (219)
T ss_dssp EEEEEEE
T ss_pred EEEEEee
Confidence 9988644
No 137
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.47 E-value=5.8e-14 Score=142.26 Aligned_cols=148 Identities=20% Similarity=0.270 Sum_probs=109.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++. .++++..+|+.. +++ +||+|++.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~~--~~D~v~~~ 258 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN-----ENLNFVGGDMFK-----SIP--SADAVLLK 258 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC-----SSEEEEECCTTT-----CCC--CCSEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC-----CCcEEEeCccCC-----CCC--CceEEEEc
Confidence 3568999999999999999999999999999999 7888776542 359999999864 233 49999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCC---CeEEEEEecCCCchhhh----hhcccccccccceeecCCCceeeccCHHHHHH
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKP---TGYVLFRDYAIGDLAQE----RLTGKDQKISENFYVRGDGTRAFYFSNDFLTS 226 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~Lkp---gG~lii~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 226 (564)
.++||+++.+...+|++++++|+| ||++++.++..+..... ....... + .+.....+ ..++.++|.+
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d-~--~~~~~~~g---~~~t~~e~~~ 332 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYD-L--VMLTMFLG---KERTKQEWEK 332 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHH-H--HHHHHHSC---CCEEHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhC-H--HHhccCCC---CCCCHHHHHH
Confidence 999999866677999999999999 99999987654321100 0000000 0 00000011 1348999999
Q ss_pred HHHhCCCcEEEeee
Q 008457 227 LFKENGFDVEELGL 240 (564)
Q Consensus 227 ~l~~aGf~~~~~~~ 240 (564)
+|+++||+++++..
T Consensus 333 ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 333 LIYDAGFSSYKITP 346 (358)
T ss_dssp HHHHTTCCEEEEEE
T ss_pred HHHHcCCCeeEEEe
Confidence 99999999887654
No 138
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.47 E-value=2.5e-13 Score=126.47 Aligned_cols=108 Identities=17% Similarity=0.239 Sum_probs=80.8
Q ss_pred cCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 72 SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 72 ~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
...++.+|||+|||+|.++..+++..++.+|+|+|+|+.|++.+.+.... ..++.++++|+.......+++ ++||+|+
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-~~~v~~~~~d~~~~~~~~~~~-~~fD~V~ 131 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-RNNIIPLLFDASKPWKYSGIV-EKVDLIY 131 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-CSSEEEECSCTTCGGGTTTTC-CCEEEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCchhhcccc-cceeEEE
Confidence 34678999999999999999999886567999999999877555443321 246888888876532112334 7899999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEEe
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
++. .++ ++...++++++++|||||.+++..
T Consensus 132 ~~~-~~~---~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 132 QDI-AQK---NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp ECC-CST---THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eec-cCh---hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 973 222 355667999999999999999973
No 139
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.46 E-value=1.6e-12 Score=127.51 Aligned_cols=146 Identities=16% Similarity=0.150 Sum_probs=113.5
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeec
Q 008457 359 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEW 438 (564)
Q Consensus 359 ~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w 438 (564)
++...+.+.+.....+.++.+|||||||+|.++..++...+.+|+++|+++.+++.+++++...+.. .++.+...|+
T Consensus 47 ~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~---~~~~~~~~d~ 123 (287)
T 1kpg_A 47 EAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENL---RSKRVLLAGW 123 (287)
T ss_dssp HHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCC---SCEEEEESCG
T ss_pred HHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCC---CCeEEEECCh
Confidence 3445566777777666788999999999998888777554569999999999999999998876653 4567666555
Q ss_pred CCCccchhhhhhcCCCccEEEEeceeeCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc------------
Q 008457 439 GNRDHIEAIKEENNEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ------------ 504 (564)
Q Consensus 439 ~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~--~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~------------ 504 (564)
.+ ++ ++||+|++.+++.+. .....+++.+.++| +|+| .+++......
T Consensus 124 ~~---------~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~ 184 (287)
T 1kpg_A 124 EQ---------FD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLL-PADG--------VMLLHTITGLHPKEIHERGLPM 184 (287)
T ss_dssp GG---------CC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHS-CTTC--------EEEEEEEEECCHHHHTTTTCSC
T ss_pred hh---------CC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhc-CCCC--------EEEEEEecCCCccccccccccc
Confidence 31 22 689999999999887 78999999999999 9988 7776654421
Q ss_pred ---------------------CChhHHHHHHHHcCCeEEEEcC
Q 008457 505 ---------------------VDEPSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 505 ---------------------~~~~~~~~~~~~~g~~~~~~~~ 526 (564)
.+...+.+.++++||+++++..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~ 227 (287)
T 1kpg_A 185 SFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQS 227 (287)
T ss_dssp HHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEEE
T ss_pred cccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEEe
Confidence 1334667778889999998864
No 140
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.46 E-value=2.4e-14 Score=127.19 Aligned_cols=105 Identities=12% Similarity=0.209 Sum_probs=87.5
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.+..+|||+|||+|.++..++...|+.+|+++|+|+.|++.++++....+....+...|.... .+.++||+|++.
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-----~~~~~~DvVLa~ 122 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-----VYKGTYDVVFLL 122 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-----HTTSEEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-----CCCCCcChhhHh
Confidence 568899999999999999999988999999999999999999998765444333444666432 267889999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEe
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
.++|++ ++.+..+.++.+.|+|||.++-..
T Consensus 123 k~LHlL--~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 123 KMLPVL--KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp TCHHHH--HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hHHHhh--hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 999999 567777889999999999887653
No 141
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.46 E-value=3e-13 Score=124.70 Aligned_cols=111 Identities=17% Similarity=0.188 Sum_probs=89.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
.++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|+++....+ .+++++++|+.... .+.+++||+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~v 97 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD---KYIDCPVKAV 97 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG---GTCCSCEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh---hhccCCceEE
Confidence 678899999999999999999884 56799999999999999998875443 47899999985432 1355899999
Q ss_pred EEccccc-------CCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 151 TMVFVLS-------AVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 151 ~~~~vl~-------~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
+++..+. ....++...+++++.++|||||.+++..+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 9987551 112346678999999999999999998754
No 142
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.46 E-value=3.3e-13 Score=127.97 Aligned_cols=151 Identities=14% Similarity=0.104 Sum_probs=113.6
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCC-CCceEEEEeecCCCccchhhhhhcCCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPF-LAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~-~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
++.+|||+|||+|.++..++.. ..+|+++|+++.+++.+++++..++.... ..++.+...+.... ++..++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-------~~~~~~ 101 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-------SFHDSS 101 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-------CSCTTC
T ss_pred CCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-------CCCCCc
Confidence 6789999999999887777776 55899999999999999999887665321 13466665555432 234678
Q ss_pred ccEEEEeceeeCCCChH---HHHHHHHHHhhccCCCCCCCCCcEEEEEEee-----------------------------
Q 008457 455 FEVILGTDVSYIPEAIL---PLFATAKELTASSNKSLREDQQPAFILCHIF----------------------------- 502 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~---~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~----------------------------- 502 (564)
||+|+++.++++..+.. .+++.+.++| +|+| .++++...
T Consensus 102 ~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (235)
T 3sm3_A 102 FDFAVMQAFLTSVPDPKERSRIIKEVFRVL-KPGA--------YLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARD 172 (235)
T ss_dssp EEEEEEESCGGGCCCHHHHHHHHHHHHHHE-EEEE--------EEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEEC
T ss_pred eeEEEEcchhhcCCCHHHHHHHHHHHHHHc-CCCe--------EEEEEECCcchhHHHHHHHhhhhccchhhhcceEecc
Confidence 99999999999988777 8999999999 9988 77765331
Q ss_pred ----------ccCChhHHHHHHHHcCCeEEEEcCCCCCCCCcccccccccc
Q 008457 503 ----------RQVDEPSMLSAATQCGFRLVDKWPSKNSASPSESIISSWFS 543 (564)
Q Consensus 503 ----------r~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (564)
+..+...+.+.++++||+++++.....+.....+...-|+.
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~g~~~~~~~i~ 223 (235)
T 3sm3_A 173 PETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVKELETRTGNKILGFVII 223 (235)
T ss_dssp TTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred cccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEecceeeccCCccceEEEe
Confidence 23455678899999999999997655455544555444443
No 143
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.46 E-value=4.3e-13 Score=123.08 Aligned_cols=118 Identities=17% Similarity=0.186 Sum_probs=96.6
Q ss_pred hHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CC--eeEEEecCCccccc
Q 008457 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TR--VSTFVCDLISDDLS 139 (564)
Q Consensus 63 ~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~--i~~~~~d~~~~~~~ 139 (564)
....+.+.+...++.+|||+|||+|.++..+++. +.+++|+|+++.+++.|+++....+ .+ +++.++|+..
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~---- 113 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE---- 113 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT----
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc----
Confidence 3455556666678899999999999999999888 7899999999999999998865433 33 8999999864
Q ss_pred CCCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCC
Q 008457 140 RQISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 140 ~~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
++++++||+|+++..+++. .++...+++++.++|+|||.+++..+..
T Consensus 114 -~~~~~~~D~v~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 114 -NVKDRKYNKIITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp -TCTTSCEEEEEECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred -ccccCCceEEEECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 2346789999999888763 3678899999999999999999986653
No 144
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.45 E-value=1.3e-12 Score=126.03 Aligned_cols=139 Identities=12% Similarity=0.112 Sum_probs=106.1
Q ss_pred hccCC-CCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCc
Q 008457 70 YFSGA-GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSS 146 (564)
Q Consensus 70 ~l~~~-~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~ 146 (564)
++... ++.+|||+|||+|.++..+++..+. +|+|+|+++.+++.|+++....+ .+++++++|+.... ..++.++
T Consensus 43 ~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~--~~~~~~~ 119 (259)
T 3lpm_A 43 FSYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT--DLIPKER 119 (259)
T ss_dssp HCCCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG--GTSCTTC
T ss_pred HhcCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh--hhhccCC
Confidence 34445 7899999999999999999988644 99999999999999998875433 46999999986532 2356789
Q ss_pred eeEEEEcccccCC------------------ChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhccccccccccee
Q 008457 147 IDIVTMVFVLSAV------------------SPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFY 208 (564)
Q Consensus 147 fD~V~~~~vl~~~------------------~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (564)
||+|+++-.+... ...+...+++.+.++|||||++++....
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--------------------- 178 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP--------------------- 178 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT---------------------
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH---------------------
Confidence 9999997544322 1135678999999999999999985321
Q ss_pred ecCCCceeeccCHHHHHHHHHhCCCcEEEeeeee
Q 008457 209 VRGDGTRAFYFSNDFLTSLFKENGFDVEELGLCC 242 (564)
Q Consensus 209 ~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 242 (564)
....++...+++.||....+....
T Consensus 179 ----------~~~~~~~~~l~~~~~~~~~~~~v~ 202 (259)
T 3lpm_A 179 ----------ERLLDIIDIMRKYRLEPKRIQFVH 202 (259)
T ss_dssp ----------TTHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ----------HHHHHHHHHHHHCCCceEEEEEee
Confidence 145678889999999988766554
No 145
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.45 E-value=7.3e-13 Score=134.21 Aligned_cols=108 Identities=15% Similarity=0.176 Sum_probs=92.4
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++....+.++++++.|+.... .++++||+|+++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~----~~~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL----TEEARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS----CTTCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc----ccCCCeEEEEEC
Confidence 46789999999999999999998 679999999999999999987665656899999986532 245799999999
Q ss_pred ccccC---CChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 154 FVLSA---VSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 154 ~vl~~---~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
..+|+ ...++...+++++.++|||||.+++....
T Consensus 306 pp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 306 PPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 99988 33478889999999999999999997543
No 146
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.45 E-value=4e-14 Score=132.34 Aligned_cols=139 Identities=18% Similarity=0.105 Sum_probs=87.2
Q ss_pred HHhhhccC-CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCC
Q 008457 66 EWGRYFSG-AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 66 ~~~~~l~~-~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 144 (564)
.+.+.+.. .++.+|||+|||+|.++..+++.+++.+++|+|+|+.+++.|+++....+.+++++++|+.. ++++
T Consensus 20 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-----~~~~ 94 (215)
T 4dzr_A 20 EAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-----WLIE 94 (215)
T ss_dssp HHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-----HHHH
T ss_pred HHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-----hhhh
Confidence 33344433 67899999999999999999999888899999999999999998876544467888888754 2233
Q ss_pred -----CceeEEEEcccccC------CChhH------------------HHHHHHHHHhccCCCeEEEEEecCCCchhhhh
Q 008457 145 -----SSIDIVTMVFVLSA------VSPEK------------------MSLVLQNIKKVLKPTGYVLFRDYAIGDLAQER 195 (564)
Q Consensus 145 -----~~fD~V~~~~vl~~------~~~~~------------------~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~ 195 (564)
++||+|+++..+++ ++... ...+++++.++|||||++++.+...
T Consensus 95 ~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------- 167 (215)
T 4dzr_A 95 RAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH------- 167 (215)
T ss_dssp HHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT-------
T ss_pred hhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC-------
Confidence 89999999654432 22111 1778999999999999954443321
Q ss_pred hcccccccccceeecCCCceeeccCHHHHHHHHH--hCCCcEEEee
Q 008457 196 LTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFK--ENGFDVEELG 239 (564)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--~aGf~~~~~~ 239 (564)
...+.+.++++ +.||..+...
T Consensus 168 -----------------------~~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 168 -----------------------NQADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp -----------------------SCHHHHHHHTGGGGGGTEECCEE
T ss_pred -----------------------ccHHHHHHHHHHhhcCCceEEEE
Confidence 14677888999 8999766543
No 147
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.45 E-value=2.3e-13 Score=124.68 Aligned_cols=110 Identities=9% Similarity=0.043 Sum_probs=90.0
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
.++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+++....+ .+++++++|+..... .+++++||+|++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~~~~fD~i~~ 119 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVA--AGTTSPVDLVLA 119 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHH--HCCSSCCSEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHh--hccCCCccEEEE
Confidence 57889999999999999988776 35689999999999999998875444 579999999864321 234689999999
Q ss_pred cccccCCChhHHHHHHHHHHh--ccCCCeEEEEEecC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKK--VLKPTGYVLFRDYA 187 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r--~LkpgG~lii~~~~ 187 (564)
+..+++. .++...+++++.+ +|+|||.+++....
T Consensus 120 ~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 120 DPPYNVD-SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp CCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 8887765 2578899999999 99999999997654
No 148
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.44 E-value=5.9e-13 Score=126.02 Aligned_cols=131 Identities=18% Similarity=0.124 Sum_probs=99.1
Q ss_pred CCCCeEEEeCCc-ccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 375 VAGKKVLELGCG-CGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 375 ~~~~~vLelG~G-~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
.++.+|||+||| +|.++..++.....+|+++|+++.+++.+++|+..++. ++.+...|+... .++.++
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~v~~~~~d~~~~------~~~~~~ 122 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS-----NVRLVKSNGGII------KGVVEG 122 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC-----CCEEEECSSCSS------TTTCCS
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC-----CcEEEeCCchhh------hhcccC
Confidence 478899999999 99888777766567999999999999999999999875 456666665322 123457
Q ss_pred CccEEEEeceeeCCCC-------------------hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHH
Q 008457 454 GFEVILGTDVSYIPEA-------------------ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAA 514 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~-------------------~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 514 (564)
+||+|+++.+.+.... ...+++.+.++| +|+| .+++....+......+.+.+
T Consensus 123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~l 193 (230)
T 3evz_A 123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHL-NPGG--------KVALYLPDKEKLLNVIKERG 193 (230)
T ss_dssp CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGE-EEEE--------EEEEEEESCHHHHHHHHHHH
T ss_pred ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHh-CCCe--------EEEEEecccHhHHHHHHHHH
Confidence 9999996544332211 478999999999 9988 77777665544445788889
Q ss_pred HHcCCeEEEEc
Q 008457 515 TQCGFRLVDKW 525 (564)
Q Consensus 515 ~~~g~~~~~~~ 525 (564)
.+.||.+..+-
T Consensus 194 ~~~g~~~~~~~ 204 (230)
T 3evz_A 194 IKLGYSVKDIK 204 (230)
T ss_dssp HHTTCEEEEEE
T ss_pred HHcCCceEEEE
Confidence 99999988773
No 149
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.44 E-value=1.2e-12 Score=126.34 Aligned_cols=131 Identities=15% Similarity=0.103 Sum_probs=102.8
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++..++. .++.+...|..+. ++++++
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~----~~v~~~~~d~~~l-------~~~~~~ 103 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGH----QQVEYVQGDAEQM-------PFTDER 103 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTC----CSEEEEECCC-CC-------CSCTTC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCC----CceEEEEecHHhC-------CCCCCC
Confidence 377899999999997777777665 4999999999999999999987765 3566666655432 245679
Q ss_pred ccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----------------------cCChhHHH
Q 008457 455 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----------------------QVDEPSML 511 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-----------------------~~~~~~~~ 511 (564)
||+|+++.++++..+...+++.+.++| +|+| .++++.... ..+...+.
T Consensus 104 fD~V~~~~~l~~~~d~~~~l~~~~r~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (260)
T 1vl5_A 104 FHIVTCRIAAHHFPNPASFVSEAYRVL-KKGG--------QLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWL 174 (260)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHE-EEEE--------EEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHH
T ss_pred EEEEEEhhhhHhcCCHHHHHHHHHHHc-CCCC--------EEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHH
Confidence 999999999999999999999999999 9988 777753321 12234667
Q ss_pred HHHHHcCCeEEEEcC
Q 008457 512 SAATQCGFRLVDKWP 526 (564)
Q Consensus 512 ~~~~~~g~~~~~~~~ 526 (564)
+.+.++||.+..+..
T Consensus 175 ~~l~~aGf~~~~~~~ 189 (260)
T 1vl5_A 175 KMLEEAGFELEELHC 189 (260)
T ss_dssp HHHHHHTCEEEEEEE
T ss_pred HHHHHCCCeEEEEEE
Confidence 888889999887753
No 150
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.44 E-value=6.8e-13 Score=126.54 Aligned_cols=132 Identities=14% Similarity=0.005 Sum_probs=101.7
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||||||+|.++..++..+..+|+++|+++.+++.+++++..++. .++.+...|+.+. +...++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~d~~~~-------~~~~~~f 147 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK----RVRNYFCCGLQDF-------TPEPDSY 147 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG----GEEEEEECCGGGC-------CCCSSCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC----ceEEEEEcChhhc-------CCCCCCE
Confidence 5789999999999877777776667999999999999999999876541 3456665554322 1234589
Q ss_pred cEEEEeceeeCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc-------------CChhHHHHHHHHcCCe
Q 008457 456 EVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------VDEPSMLSAATQCGFR 520 (564)
Q Consensus 456 D~Ii~~d~~y~~~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~-------------~~~~~~~~~~~~~g~~ 520 (564)
|+|++..++++... ...+++.+.++| +|+| .++++..... .+...+.+.+.++||+
T Consensus 148 D~v~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 218 (241)
T 2ex4_A 148 DVIWIQWVIGHLTDQHLAEFLRRCKGSL-RPNG--------IIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLS 218 (241)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCC
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhc-CCCe--------EEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCe
Confidence 99999999888766 558999999999 9988 7777543221 1345788889999999
Q ss_pred EEEEcCC
Q 008457 521 LVDKWPS 527 (564)
Q Consensus 521 ~~~~~~~ 527 (564)
++++...
T Consensus 219 ~~~~~~~ 225 (241)
T 2ex4_A 219 LLAEERQ 225 (241)
T ss_dssp EEEEEEC
T ss_pred EEEeeec
Confidence 9998643
No 151
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.43 E-value=8.6e-13 Score=119.85 Aligned_cols=134 Identities=12% Similarity=0.190 Sum_probs=105.0
Q ss_pred hHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCC
Q 008457 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQ 141 (564)
Q Consensus 63 ~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~ 141 (564)
+...+.+.+...++.+|||+|||+|.++..+++ ++.+++|+|+|+.+++.|+++....+ .++++.++|+.. .
T Consensus 23 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~---- 95 (183)
T 2yxd_A 23 IRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V---- 95 (183)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H----
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c----
Confidence 334445555557889999999999999999988 58899999999999999998865443 478999999864 2
Q ss_pred CCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCH
Q 008457 142 ISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSN 221 (564)
Q Consensus 142 ~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (564)
+++++||+|++..+ .++..+++++.++ |||.+++...... +.
T Consensus 96 ~~~~~~D~i~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~~~~------------------------------~~ 137 (183)
T 2yxd_A 96 LDKLEFNKAFIGGT------KNIEKIIEILDKK--KINHIVANTIVLE------------------------------NA 137 (183)
T ss_dssp GGGCCCSEEEECSC------SCHHHHHHHHHHT--TCCEEEEEESCHH------------------------------HH
T ss_pred ccCCCCcEEEECCc------ccHHHHHHHHhhC--CCCEEEEEecccc------------------------------cH
Confidence 34578999999888 2567899999998 9999999764321 24
Q ss_pred HHHHHHHHhCCCcEEEeeee
Q 008457 222 DFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 222 ~~l~~~l~~aGf~~~~~~~~ 241 (564)
.++.+.+++.||.+..+...
T Consensus 138 ~~~~~~l~~~g~~~~~~~~~ 157 (183)
T 2yxd_A 138 AKIINEFESRGYNVDAVNVF 157 (183)
T ss_dssp HHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEee
Confidence 66788999999987665443
No 152
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.43 E-value=1.9e-12 Score=126.14 Aligned_cols=147 Identities=16% Similarity=0.156 Sum_probs=114.3
Q ss_pred HHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecC
Q 008457 361 AHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWG 439 (564)
Q Consensus 361 ~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~ 439 (564)
...+..++.....+.++.+|||||||+|.++..++... ..+|+++|+++.+++.+++++..++. .++.+...|..
T Consensus 22 ~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~d~~ 97 (276)
T 3mgg_A 22 AETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI----KNVKFLQANIF 97 (276)
T ss_dssp -CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC----CSEEEEECCGG
T ss_pred HHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEcccc
Confidence 34567777776666789999999999998888777765 56999999999999999999988775 34666665554
Q ss_pred CCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec----------------
Q 008457 440 NRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR---------------- 503 (564)
Q Consensus 440 ~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r---------------- 503 (564)
+. ++++++||+|+++.++++..+...+++.+.++| +|+| .+++.....
T Consensus 98 ~~-------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T 3mgg_A 98 SL-------PFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVL-KPGG--------TITVIEGDHGSCYFHPEGKKAIEAW 161 (276)
T ss_dssp GC-------CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE-EEEE--------EEEEEEECGGGCEEESCCHHHHHHH
T ss_pred cC-------CCCCCCeeEEEEechhhhcCCHHHHHHHHHHHc-CCCc--------EEEEEEcCCCCceECCCcHHHHHHH
Confidence 32 234679999999999999999999999999999 9988 777754211
Q ss_pred -------------cCChhHHHHHHHHcCCeEEEEcCC
Q 008457 504 -------------QVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 504 -------------~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
......+...++++||+++++...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 162 NCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp HHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEEeeE
Confidence 011245677888999999888643
No 153
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.43 E-value=6.2e-13 Score=121.75 Aligned_cols=136 Identities=22% Similarity=0.244 Sum_probs=104.9
Q ss_pred hHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccC
Q 008457 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSR 140 (564)
Q Consensus 63 ~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~ 140 (564)
+...+.+.+...++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|+++....+ .++.+.++|+.. .+
T Consensus 21 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-- 95 (192)
T 1l3i_A 21 VRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-AL-- 95 (192)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HH--
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hc--
Confidence 33444455556788999999999999999998884 799999999999999998765433 478898888754 12
Q ss_pred CCCC-CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeecc
Q 008457 141 QISP-SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYF 219 (564)
Q Consensus 141 ~~~~-~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (564)
+. ++||+|++..++++ +..+++++.++|+|||.+++..+.. -
T Consensus 96 --~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~l~~gG~l~~~~~~~------------------------------~ 138 (192)
T 1l3i_A 96 --CKIPDIDIAVVGGSGGE-----LQEILRIIKDKLKPGGRIIVTAILL------------------------------E 138 (192)
T ss_dssp --TTSCCEEEEEESCCTTC-----HHHHHHHHHHTEEEEEEEEEEECBH------------------------------H
T ss_pred --ccCCCCCEEEECCchHH-----HHHHHHHHHHhcCCCcEEEEEecCc------------------------------c
Confidence 22 58999999887764 4679999999999999999875431 1
Q ss_pred CHHHHHHHHHhCCCcEEEeee
Q 008457 220 SNDFLTSLFKENGFDVEELGL 240 (564)
Q Consensus 220 ~~~~l~~~l~~aGf~~~~~~~ 240 (564)
+..++.+.+++.||.+.....
T Consensus 139 ~~~~~~~~l~~~g~~~~~~~~ 159 (192)
T 1l3i_A 139 TKFEAMECLRDLGFDVNITEL 159 (192)
T ss_dssp HHHHHHHHHHHTTCCCEEEEE
T ss_pred hHHHHHHHHHHCCCceEEEEE
Confidence 356778899999996554433
No 154
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.43 E-value=1.8e-12 Score=126.93 Aligned_cols=133 Identities=14% Similarity=0.067 Sum_probs=106.3
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||||||+|.++..++.. +.+|+++|+++.+++.+++++..++.. .++.+...|+.+. ....+++|
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~------~~~~~~~f 137 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVS---DNMQFIHCAAQDV------ASHLETPV 137 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCG---GGEEEEESCGGGT------GGGCSSCE
T ss_pred CCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCC---cceEEEEcCHHHh------hhhcCCCc
Confidence 4679999999999887777766 568999999999999999999887653 4677776665432 12456799
Q ss_pred cEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee--------------------------------c
Q 008457 456 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF--------------------------------R 503 (564)
Q Consensus 456 D~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~--------------------------------r 503 (564)
|+|++..++++..+...+++.+.++| +|+| .+++.... +
T Consensus 138 D~v~~~~~l~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (285)
T 4htf_A 138 DLILFHAVLEWVADPRSVLQTLWSVL-RPGG--------VLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDY 208 (285)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHTE-EEEE--------EEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSC
T ss_pred eEEEECchhhcccCHHHHHHHHHHHc-CCCe--------EEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCC
Confidence 99999999999999999999999999 9988 77776642 1
Q ss_pred cCChhHHHHHHHHcCCeEEEEcCC
Q 008457 504 QVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 504 ~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
..+...+.+.++++||+++++..+
T Consensus 209 ~~~~~~l~~~l~~aGf~v~~~~~~ 232 (285)
T 4htf_A 209 PRDPTQVYLWLEEAGWQIMGKTGV 232 (285)
T ss_dssp CBCHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCceeeeeeE
Confidence 123357788889999999988755
No 155
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.43 E-value=2.7e-12 Score=126.78 Aligned_cols=144 Identities=13% Similarity=0.106 Sum_probs=111.9
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCC
Q 008457 362 HLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNR 441 (564)
Q Consensus 362 ~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~ 441 (564)
....+.+.....+.++.+|||||||+|.++..++...+.+|+++|+|+.+++.+++++..+++. .++.+...|+.+
T Consensus 58 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~- 133 (302)
T 3hem_A 58 YAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSP---RRKEVRIQGWEE- 133 (302)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCS---SCEEEEECCGGG-
T ss_pred HHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCC---CceEEEECCHHH-
Confidence 3445556666666688999999999998888888774579999999999999999999988764 467777666532
Q ss_pred ccchhhhhhcCCCccEEEEeceeeCC---------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc--------
Q 008457 442 DHIEAIKEENNEGFEVILGTDVSYIP---------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------- 504 (564)
Q Consensus 442 ~~~~~~~~~~~~~fD~Ii~~d~~y~~---------~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~-------- 504 (564)
+ +++||+|++..++.+. .....+++.+.++| +|+| .+++......
T Consensus 134 --------~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~~~~~~~~~~~~ 195 (302)
T 3hem_A 134 --------F-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLT-PDDG--------RMLLHTITIPDKEEAQEL 195 (302)
T ss_dssp --------C-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSS-CTTC--------EEEEEEEECCCHHHHHHH
T ss_pred --------c-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhc-CCCc--------EEEEEEEeccCccchhhc
Confidence 2 5799999999999887 34589999999999 9988 7776655321
Q ss_pred -------------------------CChhHHHHHHHHcCCeEEEEcCC
Q 008457 505 -------------------------VDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 505 -------------------------~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
.+...+.+.+++.||+++++...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~ 243 (302)
T 3hem_A 196 GLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRI 243 (302)
T ss_dssp TCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEEC
T ss_pred cccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEEeC
Confidence 12235677888899999988643
No 156
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.42 E-value=7.2e-13 Score=123.50 Aligned_cols=112 Identities=14% Similarity=0.077 Sum_probs=92.2
Q ss_pred hhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccC
Q 008457 62 YLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSR 140 (564)
Q Consensus 62 ~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~ 140 (564)
.+...+.+.+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++....+ .++++..+|+....
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--- 138 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW--- 138 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC---
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC---
Confidence 33445556666688999999999999999999998 7899999999999999998875433 46899999986532
Q ss_pred CCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 141 QISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 141 ~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
.+.++||+|++..+++|++. ++.++|||||++++....
T Consensus 139 -~~~~~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 -QARAPFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp -GGGCCEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred -ccCCCccEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 24578999999999999963 578999999999998665
No 157
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.42 E-value=2.5e-12 Score=120.49 Aligned_cols=109 Identities=18% Similarity=0.220 Sum_probs=80.0
Q ss_pred cCCCCCeEEEEcCCccccHHHHHHh-CCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEE
Q 008457 72 SGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 72 ~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
...++.+|||+|||+|.++..+++. .+..+|+|+|+|+.|++...+.... ..++.++++|+........ ..++||+|
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-r~nv~~i~~Da~~~~~~~~-~~~~~D~I 150 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-RPNIFPLLADARFPQSYKS-VVENVDVL 150 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-CTTEEEEECCTTCGGGTTT-TCCCEEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-cCCeEEEEcccccchhhhc-cccceEEE
Confidence 3578999999999999999999887 5678999999999886443322211 2579999999875432111 24689999
Q ss_pred EEcccccCCChhHHHHHHHHHHhccCCCeEEEEEec
Q 008457 151 TMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 151 ~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
++.... + +....++..+.+.|||||.|+++..
T Consensus 151 ~~d~a~---~-~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 151 YVDIAQ---P-DQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp EECCCC---T-THHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EecCCC---h-hHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 997653 2 3444455667779999999999743
No 158
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.42 E-value=4e-13 Score=130.83 Aligned_cols=131 Identities=18% Similarity=0.107 Sum_probs=102.9
Q ss_pred hhhccCCCCCeEEEEcCCccccHHHHHHh-CCCcEEEEEeCChHHHHHHHhccccc-C-CCeeEEEecCCcccccCCCCC
Q 008457 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFT-E-TRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 68 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~~iD~s~~~l~~a~~~~~~~-~-~~i~~~~~d~~~~~~~~~~~~ 144 (564)
.+.+...++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|+++.... + .++++.++|+.. ++++
T Consensus 103 ~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-----~~~~ 177 (275)
T 1yb2_A 103 IMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-----FISD 177 (275)
T ss_dssp ---CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-----CCCS
T ss_pred HHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-----cCcC
Confidence 34445578899999999999999999987 67889999999999999999887544 3 578999998864 3456
Q ss_pred CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHH
Q 008457 145 SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFL 224 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 224 (564)
++||+|++ +++ ++..+++++.++|||||.+++.+.... ..+++
T Consensus 178 ~~fD~Vi~-----~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~------------------------------~~~~~ 220 (275)
T 1yb2_A 178 QMYDAVIA-----DIP--DPWNHVQKIASMMKPGSVATFYLPNFD------------------------------QSEKT 220 (275)
T ss_dssp CCEEEEEE-----CCS--CGGGSHHHHHHTEEEEEEEEEEESSHH------------------------------HHHHH
T ss_pred CCccEEEE-----cCc--CHHHHHHHHHHHcCCCCEEEEEeCCHH------------------------------HHHHH
Confidence 78999998 443 456799999999999999999764320 24566
Q ss_pred HHHHHhCCCcEEEeee
Q 008457 225 TSLFKENGFDVEELGL 240 (564)
Q Consensus 225 ~~~l~~aGf~~~~~~~ 240 (564)
.+.++++||..++...
T Consensus 221 ~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 221 VLSLSASGMHHLETVE 236 (275)
T ss_dssp HHHSGGGTEEEEEEEE
T ss_pred HHHHHHCCCeEEEEEE
Confidence 7788889998876543
No 159
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=2.9e-12 Score=123.44 Aligned_cols=116 Identities=11% Similarity=0.136 Sum_probs=89.7
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccc---cC--CCeeEEEecCCcccc---cC
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF---TE--TRVSTFVCDLISDDL---SR 140 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~---~~--~~i~~~~~d~~~~~~---~~ 140 (564)
.++...++.+|||+|||+|.++..++++.|+.+|+|+|+++.+++.|+++... .+ .+++++++|+..... ..
T Consensus 30 ~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~ 109 (260)
T 2ozv_A 30 SLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEA 109 (260)
T ss_dssp HTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHT
T ss_pred HHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhh
Confidence 34444678899999999999999999998889999999999999999998765 33 358999999865411 01
Q ss_pred CCCCCceeEEEEccccc----------------CCChhHHHHHHHHHHhccCCCeEEEEE
Q 008457 141 QISPSSIDIVTMVFVLS----------------AVSPEKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 141 ~~~~~~fD~V~~~~vl~----------------~~~~~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
++++++||+|+++-.+. |........+++.+.++|||||.+++.
T Consensus 110 ~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 110 GLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp TCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 34678999999973322 122234678999999999999999885
No 160
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.41 E-value=8.4e-13 Score=133.70 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=93.2
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC----CCeeEEEecCCcccccCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE----TRVSTFVCDLISDDLSRQ 141 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~----~~i~~~~~d~~~~~~~~~ 141 (564)
.+.+.+...++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.|+++....+ .++++...|+.. +
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-----~ 287 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-----G 287 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-----T
T ss_pred HHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-----c
Confidence 4455666567799999999999999999999989999999999999999998765433 257889999864 3
Q ss_pred CCCCceeEEEEcccccCC---ChhHHHHHHHHHHhccCCCeEEEEEe
Q 008457 142 ISPSSIDIVTMVFVLSAV---SPEKMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 142 ~~~~~fD~V~~~~vl~~~---~~~~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
+++++||+|+++..+|+. .......+++++.++|||||.+++..
T Consensus 288 ~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 288 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 467899999999888853 33455679999999999999999964
No 161
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.41 E-value=2.9e-12 Score=120.95 Aligned_cols=106 Identities=18% Similarity=0.267 Sum_probs=84.4
Q ss_pred CCCCCeEEEEcCCccccHHHHHHh-CCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
..++.+|||+|||+|.++..+++. .++.+|+|+|+|+.+++.++++.... .++++.++|+.......++ .++||+|+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~-~~~~D~v~ 148 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRAL-VPKVDVIF 148 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTT-CCCEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcc-cCCceEEE
Confidence 467889999999999999999987 45679999999999999888776544 6899999998753221122 35899999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEE
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
+... .+.....++.++.++|||||.+++.
T Consensus 149 ~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 149 EDVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 8654 2234456699999999999999987
No 162
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.41 E-value=1.7e-12 Score=127.95 Aligned_cols=143 Identities=17% Similarity=0.160 Sum_probs=103.4
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccc-----cCCCeeEEEecCCcccccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|+++... ...+++++.+|+..... ..++++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~--~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVR--QTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH--SSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHH--hccCCcee
Confidence 567899999999999999999876678999999999999999987631 23679999999854321 11467899
Q ss_pred EEEEcccccCCChhHH--HHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHH
Q 008457 149 IVTMVFVLSAVSPEKM--SLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTS 226 (564)
Q Consensus 149 ~V~~~~vl~~~~~~~~--~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 226 (564)
+|++....++.+...+ ..++++++++|||||++++....... .......+.+
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--------------------------~~~~~~~~~~ 225 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL--------------------------DLELIEKMSR 225 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT--------------------------CHHHHHHHHH
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc--------------------------chHHHHHHHH
Confidence 9999776655432222 58999999999999999986432100 0013577888
Q ss_pred HHHhCCCcEEEeeeeecc
Q 008457 227 LFKENGFDVEELGLCCKQ 244 (564)
Q Consensus 227 ~l~~aGf~~~~~~~~~~~ 244 (564)
.++++||..+.......+
T Consensus 226 ~l~~~GF~~v~~~~~~vP 243 (304)
T 3bwc_A 226 FIRETGFASVQYALMHVP 243 (304)
T ss_dssp HHHHHTCSEEEEEECCCT
T ss_pred HHHhCCCCcEEEEEeecc
Confidence 999999998876555433
No 163
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.41 E-value=4.1e-12 Score=116.45 Aligned_cols=164 Identities=16% Similarity=0.202 Sum_probs=111.6
Q ss_pred CCceEEEEEeCCceEEEEEecccccccCCCccceechhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEE
Q 008457 323 EDNEMIEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLV 402 (564)
Q Consensus 323 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v 402 (564)
+....+...+.+..+.+....+.+.... .-..+..+.+.+ ...++.+|||+|||+|.++..++.. ..+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~----~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v 77 (194)
T 1dus_A 9 SDVKIVEDILRGKKLKFKTDSGVFSYGK------VDKGTKILVENV----VVDKDDDILDLGCGYGVIGIALADE-VKST 77 (194)
T ss_dssp CCEEEEEEEETTEEEEEEEETTSTTTTS------CCHHHHHHHHHC----CCCTTCEEEEETCTTSHHHHHHGGG-SSEE
T ss_pred ccccEEeeecCCCceEEEeCCCcCCccc------cchHHHHHHHHc----ccCCCCeEEEeCCCCCHHHHHHHHc-CCeE
Confidence 4555666677787777754333321110 112233333333 3347889999999999887777766 7799
Q ss_pred EEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeC-CCChHHHHHHHHHHh
Q 008457 403 VATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI-PEAILPLFATAKELT 481 (564)
Q Consensus 403 ~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~-~~~~~~l~~~~~~ll 481 (564)
+++|+++.+++.+++|+..++... .++.+...|+.+. ...++||+|++..++++ ......+++.+.++|
T Consensus 78 ~~~D~~~~~~~~a~~~~~~~~~~~--~~~~~~~~d~~~~--------~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L 147 (194)
T 1dus_A 78 TMADINRRAIKLAKENIKLNNLDN--YDIRVVHSDLYEN--------VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELL 147 (194)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTT--SCEEEEECSTTTT--------CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCc--cceEEEECchhcc--------cccCCceEEEECCCcccchhHHHHHHHHHHHHc
Confidence 999999999999999999877531 1477777776542 12468999998665443 356789999999999
Q ss_pred hccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHc
Q 008457 482 ASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQC 517 (564)
Q Consensus 482 ~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 517 (564)
+|+| .+++....+.. ...+.+.+.+.
T Consensus 148 -~~gG--------~l~~~~~~~~~-~~~~~~~l~~~ 173 (194)
T 1dus_A 148 -KDNG--------EIWVVIQTKQG-AKSLAKYMKDV 173 (194)
T ss_dssp -EEEE--------EEEEEEESTHH-HHHHHHHHHHH
T ss_pred -CCCC--------EEEEEECCCCC-hHHHHHHHHHH
Confidence 9988 77777665533 23466666655
No 164
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.40 E-value=1.8e-12 Score=121.70 Aligned_cols=134 Identities=15% Similarity=0.193 Sum_probs=99.0
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCC-CEEEEEcCChhHHHHHHHHHHhcCCCC-CCCceEEEEeecCCCccchhhhhhcC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPP-FLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~-~~v~~tD~~~~~l~~~~~n~~~n~~~~-~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.++.+|||||||+|.++..++..+. .+|+++|+++.+++.+++++..+++.. ...++.+...|+... +...
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-------~~~~ 100 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR-------DKRF 100 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC-------CGGG
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc-------cccc
Confidence 3678999999999988888877654 699999999999999999998776531 001577776666322 2234
Q ss_pred CCccEEEEeceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc--------------------CChhHH
Q 008457 453 EGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------------------VDEPSM 510 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~--------------------~~~~~~ 510 (564)
++||+|++.+++.+.. ....+++.+.++| +|+| .++.+..... .+...+
T Consensus 101 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (219)
T 3jwg_A 101 SGYDAATVIEVIEHLDENRLQAFEKVLFEFT-RPQT--------VIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEF 171 (219)
T ss_dssp TTCSEEEEESCGGGCCHHHHHHHHHHHHTTT-CCSE--------EEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHH
T ss_pred CCCCEEEEHHHHHhCCHHHHHHHHHHHHHhh-CCCE--------EEEEccchhhhhhhcccCcccccccCceeeecHHHH
Confidence 6899999999999877 3479999999999 9976 5555433211 133345
Q ss_pred H----HHHHHcCCeEEEE
Q 008457 511 L----SAATQCGFRLVDK 524 (564)
Q Consensus 511 ~----~~~~~~g~~~~~~ 524 (564)
. +.+.++||+++..
T Consensus 172 ~~~~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 172 QTWAVKVAEKYGYSVRFL 189 (219)
T ss_dssp HHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHCCcEEEEE
Confidence 5 6678899998766
No 165
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.40 E-value=5.1e-13 Score=133.16 Aligned_cols=118 Identities=10% Similarity=0.087 Sum_probs=92.4
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccc-------c---cCCCeeEEEecCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD-------F---TETRVSTFVCDLI 134 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~-------~---~~~~i~~~~~d~~ 134 (564)
..+.+.+...++.+|||||||+|..+..++...+..+|+|+|+|+.+++.|++... . ...+++++++|+.
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~ 242 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL 242 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECccc
Confidence 44445566688999999999999999999987655569999999999999986421 1 1257999999997
Q ss_pred cccccCCCCC--CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCC
Q 008457 135 SDDLSRQISP--SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIG 189 (564)
Q Consensus 135 ~~~~~~~~~~--~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~ 189 (564)
...+ .+ ..||+|+++..++ . .++...|.+++++|||||.|++.+...+
T Consensus 243 ~lp~----~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 243 SEEW----RERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp SHHH----HHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred CCcc----ccccCCccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 6433 22 4799999987753 3 4788889999999999999999765543
No 166
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.40 E-value=5.5e-12 Score=118.50 Aligned_cols=114 Identities=14% Similarity=0.192 Sum_probs=87.0
Q ss_pred hccCCCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcc--cccCCCCC
Q 008457 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISD--DLSRQISP 144 (564)
Q Consensus 70 ~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~--~~~~~~~~ 144 (564)
++...++.+|||||||+|..+..+++.. ++.+|+++|+++.+++.|+++....+ .+++++++|+... .+...+..
T Consensus 53 l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~ 132 (221)
T 3u81_A 53 VIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDV 132 (221)
T ss_dssp HHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCC
T ss_pred HHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCC
Confidence 3333577899999999999999999875 47899999999999999999865433 4699999997432 11111123
Q ss_pred CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEec
Q 008457 145 SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
++||+|++....++. .....++..+ ++|||||++++.+.
T Consensus 133 ~~fD~V~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 133 DTLDMVFLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp CCCSEEEECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred CceEEEEEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCC
Confidence 789999998877766 3455677777 99999999998543
No 167
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.40 E-value=2e-12 Score=124.25 Aligned_cols=139 Identities=9% Similarity=0.016 Sum_probs=105.2
Q ss_pred HHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchh
Q 008457 367 VLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEA 446 (564)
Q Consensus 367 ~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~ 446 (564)
.+.......++.+|||||||+|.++..++..+..+|+++|+++.+++.+++++..+ .++.+...|+.+.
T Consensus 84 ~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~----- 152 (254)
T 1xtp_A 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM------PVGKFILASMETA----- 152 (254)
T ss_dssp HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS------SEEEEEESCGGGC-----
T ss_pred HHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC------CceEEEEccHHHC-----
Confidence 33333344578899999999998887777766678999999999999999987543 3466666555432
Q ss_pred hhhhcCCCccEEEEeceeeCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------cCChhHH
Q 008457 447 IKEENNEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFR--------------QVDEPSM 510 (564)
Q Consensus 447 ~~~~~~~~fD~Ii~~d~~y~~--~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r--------------~~~~~~~ 510 (564)
++++++||+|++..++++. .....+++.+.++| +|+| .++++.... ..+...+
T Consensus 153 --~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (254)
T 1xtp_A 153 --TLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQAL-TPNG--------YIFFKENCSTGDRFLVDKEDSSLTRSDIHY 221 (254)
T ss_dssp --CCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEEEBC--CCEEEETTTTEEEBCHHHH
T ss_pred --CCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhc-CCCe--------EEEEEecCCCcccceecccCCcccCCHHHH
Confidence 2345789999999999887 56899999999999 9988 777765311 1133567
Q ss_pred HHHHHHcCCeEEEEcCC
Q 008457 511 LSAATQCGFRLVDKWPS 527 (564)
Q Consensus 511 ~~~~~~~g~~~~~~~~~ 527 (564)
.+.+.++||+++++...
T Consensus 222 ~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 222 KRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp HHHHHHHTCCEEEEEEC
T ss_pred HHHHHHCCCEEEEeeec
Confidence 88888999999988643
No 168
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.40 E-value=7.5e-13 Score=125.36 Aligned_cols=113 Identities=13% Similarity=0.234 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccc-------ccCCCeeEEEecCCcccccCCCCCCc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD-------FTETRVSTFVCDLISDDLSRQISPSS 146 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~-------~~~~~i~~~~~d~~~~~~~~~~~~~~ 146 (564)
.++.+|||||||+|.++..|++.+|+.+|+|+|+|+.|++.|+++.. ....++.++++|+... ++..+++++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~-l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH-LPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC-HHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh-hhhhCCCcC
Confidence 56789999999999999999999889999999999999999987543 1235799999998641 211256889
Q ss_pred eeEEEEcccccCCChh------HHHHHHHHHHhccCCCeEEEEEecC
Q 008457 147 IDIVTMVFVLSAVSPE------KMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 147 fD~V~~~~vl~~~~~~------~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
||.|+++..-.|.... ....+++++.++|||||.|++.+..
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 9999986544332100 0146999999999999999987543
No 169
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.40 E-value=1.6e-12 Score=117.55 Aligned_cols=121 Identities=16% Similarity=0.088 Sum_probs=92.4
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
..++.+|||+|||. +++|+|+.|++.|+++... ++++.++|+..... .++++++||+|++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~-~~~~~~~fD~V~~ 69 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN---EGRVSVENIKQLLQ-SAHKESSFDIILS 69 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGG-GCCCSSCEEEEEE
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc---CcEEEEechhcCcc-ccCCCCCEeEEEE
Confidence 36899999999986 2399999999999988642 48999999865322 1236889999999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENG 232 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 232 (564)
+.++||++ .++..++++++|+|||||++++..+.... .+...+..+.+++.++++++|
T Consensus 70 ~~~l~~~~-~~~~~~l~~~~r~LkpgG~l~~~~~~~~~---------------------~~~~~~~~~~~~~~~~l~~aG 127 (176)
T 2ld4_A 70 GLVPGSTT-LHSAEILAEIARILRPGGCLFLKEPVETA---------------------VDNNSKVKTASKLCSALTLSG 127 (176)
T ss_dssp CCSTTCCC-CCCHHHHHHHHHHEEEEEEEEEEEEEESS---------------------SCSSSSSCCHHHHHHHHHHTT
T ss_pred CChhhhcc-cCHHHHHHHHHHHCCCCEEEEEEcccccc---------------------cccccccCCHHHHHHHHHHCC
Confidence 99999993 24688999999999999999995432110 001222347899999999999
Q ss_pred CcEE
Q 008457 233 FDVE 236 (564)
Q Consensus 233 f~~~ 236 (564)
| +.
T Consensus 128 f-i~ 130 (176)
T 2ld4_A 128 L-VE 130 (176)
T ss_dssp C-EE
T ss_pred C-cE
Confidence 9 54
No 170
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.39 E-value=2.6e-12 Score=119.13 Aligned_cols=124 Identities=6% Similarity=0.069 Sum_probs=95.8
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 451 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~ 451 (564)
...++.+|||+|||+|.++..++..+ ..+|+++|+++.+++.+++|+..++. .++.+...|+.+. .. .
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~v~~~~~d~~~~--~~-----~ 105 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA----RNVTLVEAFAPEG--LD-----D 105 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC----TTEEEEECCTTTT--CT-----T
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC----CcEEEEeCChhhh--hh-----c
Confidence 44578899999999998888887765 46999999999999999999998876 4577766665432 10 1
Q ss_pred CCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCe
Q 008457 452 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFR 520 (564)
Q Consensus 452 ~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~ 520 (564)
..+||+|++..... ....+++.+.++| +|+| .+++...... ....+.+.+.+.||.
T Consensus 106 ~~~~D~i~~~~~~~---~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~-~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 106 LPDPDRVFIGGSGG---MLEEIIDAVDRRL-KSEG--------VIVLNAVTLD-TLTKAVEFLEDHGYM 161 (204)
T ss_dssp SCCCSEEEESCCTT---CHHHHHHHHHHHC-CTTC--------EEEEEECBHH-HHHHHHHHHHHTTCE
T ss_pred CCCCCEEEECCCCc---CHHHHHHHHHHhc-CCCe--------EEEEEecccc-cHHHHHHHHHHCCCc
Confidence 25799999776554 7889999999999 9988 7777654432 234678888899984
No 171
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.39 E-value=3.3e-12 Score=119.65 Aligned_cols=134 Identities=10% Similarity=0.164 Sum_probs=99.1
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCC-CEEEEEcCChhHHHHHHHHHHhcCCCC-CCCceEEEEeecCCCccchhhhhhcC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPP-FLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~-~~v~~tD~~~~~l~~~~~n~~~n~~~~-~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.++.+|||||||+|.++..++..+. .+|+++|+++.+++.+++|+..++... ...++.+...|.... +...
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-------~~~~ 100 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ-------DKRF 100 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC-------CGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc-------cccC
Confidence 3678999999999988888877654 699999999999999999998776531 012577776665322 2234
Q ss_pred CCccEEEEeceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc--------------------CChhHH
Q 008457 453 EGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------------------VDEPSM 510 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~--------------------~~~~~~ 510 (564)
++||+|++.+++++.. ....+++.+.++| +|+| .++++..... .+...+
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (217)
T 3jwh_A 101 HGYDAATVIEVIEHLDLSRLGAFERVLFEFA-QPKI--------VIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQF 171 (217)
T ss_dssp CSCSEEEEESCGGGCCHHHHHHHHHHHHTTT-CCSE--------EEEEEEBHHHHHHTC-----------CCSCBCHHHH
T ss_pred CCcCEEeeHHHHHcCCHHHHHHHHHHHHHHc-CCCE--------EEEEccCcccchhhcccccccccccccccccCHHHH
Confidence 6899999999999876 4489999999999 9976 6655533210 133455
Q ss_pred H----HHHHHcCCeEEEE
Q 008457 511 L----SAATQCGFRLVDK 524 (564)
Q Consensus 511 ~----~~~~~~g~~~~~~ 524 (564)
. +.+.++||+++..
T Consensus 172 ~~~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 172 QNWANKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHHHHHSSEEEEEC
T ss_pred HHHHHHHHHHcCceEEEE
Confidence 5 7778899998754
No 172
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.39 E-value=1.8e-12 Score=122.66 Aligned_cols=109 Identities=13% Similarity=0.028 Sum_probs=90.0
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 144 (564)
..+.+.+...++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++....+ ++.+.++|+... + ...
T Consensus 60 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~-~---~~~ 132 (231)
T 1vbf_A 60 IFMLDELDLHKGQKVLEIGTGIGYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLG-Y---EEE 132 (231)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGC-C---GGG
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH--cCEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccc-c---ccC
Confidence 34455556678899999999999999999998 4799999999999999999876544 899999998641 1 135
Q ss_pred CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCC
Q 008457 145 SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
++||+|++..+++|++ .++.++|+|||.+++.....
T Consensus 133 ~~fD~v~~~~~~~~~~--------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLL--------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCEEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHHH--------HHHHHHcCCCcEEEEEEcCC
Confidence 7899999999999985 25889999999999986543
No 173
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.39 E-value=1.6e-12 Score=125.12 Aligned_cols=133 Identities=18% Similarity=0.174 Sum_probs=105.2
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHh-CCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~ 142 (564)
.+...+...++.+|||+|||+|.++..+++. +|+.+|+++|+++.+++.|+++....+ .++++.++|+.. ++
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~ 158 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE-----GI 158 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG-----CC
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh-----cc
Confidence 3444555678999999999999999999998 788999999999999999998865433 348999999863 34
Q ss_pred CCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHH
Q 008457 143 SPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSND 222 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (564)
++++||+|++. .+ ++..+++++.++|+|||.+++..+... ..+
T Consensus 159 ~~~~~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~~~------------------------------~~~ 201 (255)
T 3mb5_A 159 EEENVDHVILD-----LP--QPERVVEHAAKALKPGGFFVAYTPCSN------------------------------QVM 201 (255)
T ss_dssp CCCSEEEEEEC-----SS--CGGGGHHHHHHHEEEEEEEEEEESSHH------------------------------HHH
T ss_pred CCCCcCEEEEC-----CC--CHHHHHHHHHHHcCCCCEEEEEECCHH------------------------------HHH
Confidence 67889999983 32 445789999999999999998754321 256
Q ss_pred HHHHHHHhCC--CcEEEeee
Q 008457 223 FLTSLFKENG--FDVEELGL 240 (564)
Q Consensus 223 ~l~~~l~~aG--f~~~~~~~ 240 (564)
++.+.+++.| |..++...
T Consensus 202 ~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 202 RLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp HHHHHHHHTGGGBSCCEEEC
T ss_pred HHHHHHHHcCCCccccEEEE
Confidence 6778899999 97766433
No 174
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.39 E-value=2.4e-12 Score=119.43 Aligned_cols=141 Identities=17% Similarity=0.159 Sum_probs=108.2
Q ss_pred echhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEe
Q 008457 357 LWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 436 (564)
Q Consensus 357 ~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l 436 (564)
.++.+..+.+++.... .++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++|+..++.. .+.+...
T Consensus 43 ~~~~~~~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~v~~~~~ 116 (205)
T 3grz_A 43 NHQTTQLAMLGIERAM--VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY----DIALQKT 116 (205)
T ss_dssp CHHHHHHHHHHHHHHC--SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----CCEEEES
T ss_pred CCccHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEec
Confidence 4566677777776543 367899999999998888777666679999999999999999999988763 2677766
Q ss_pred ecCCCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHH
Q 008457 437 EWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQ 516 (564)
Q Consensus 437 ~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 516 (564)
|+.+. .+++||+|+++.++. .+..+++.+.++| +|+| .++++..... ....+.+.+.+
T Consensus 117 d~~~~---------~~~~fD~i~~~~~~~---~~~~~l~~~~~~L-~~gG--------~l~~~~~~~~-~~~~~~~~~~~ 174 (205)
T 3grz_A 117 SLLAD---------VDGKFDLIVANILAE---ILLDLIPQLDSHL-NEDG--------QVIFSGIDYL-QLPKIEQALAE 174 (205)
T ss_dssp STTTT---------CCSCEEEEEEESCHH---HHHHHGGGSGGGE-EEEE--------EEEEEEEEGG-GHHHHHHHHHH
T ss_pred ccccc---------CCCCceEEEECCcHH---HHHHHHHHHHHhc-CCCC--------EEEEEecCcc-cHHHHHHHHHH
Confidence 66432 346899999875442 3578889999999 9988 7777644443 23467888889
Q ss_pred cCCeEEEEc
Q 008457 517 CGFRLVDKW 525 (564)
Q Consensus 517 ~g~~~~~~~ 525 (564)
.||++.++.
T Consensus 175 ~Gf~~~~~~ 183 (205)
T 3grz_A 175 NSFQIDLKM 183 (205)
T ss_dssp TTEEEEEEE
T ss_pred cCCceEEee
Confidence 999999876
No 175
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.39 E-value=4.5e-13 Score=134.73 Aligned_cols=117 Identities=18% Similarity=0.219 Sum_probs=95.7
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 144 (564)
..+.+.+...++.+|||+|||+|.++..+++.+|..+|+++|+|+.+++.|+++....+..+++...|+.. +.+
T Consensus 186 ~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~------~~~ 259 (343)
T 2pjd_A 186 QLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFS------EVK 259 (343)
T ss_dssp HHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT------TCC
T ss_pred HHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccc------ccc
Confidence 34445554456789999999999999999999887899999999999999999876555567778888753 236
Q ss_pred CceeEEEEcccccCC---ChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 145 SSIDIVTMVFVLSAV---SPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~---~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
++||+|+++..+|+. +.++...+++++.++|||||.+++....
T Consensus 260 ~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 260 GRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp SCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 789999999998863 3456789999999999999999997543
No 176
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.39 E-value=4e-12 Score=117.99 Aligned_cols=127 Identities=9% Similarity=0.126 Sum_probs=103.0
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCC-ceeEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPS-SIDIV 150 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~-~fD~V 150 (564)
.++.+|||||||+|.++..+++.+|..+|+++|+++.+++.|+++....+ .++++.++|... +++.+ +||+|
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-----~l~~~~~~D~I 88 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-----AFEETDQVSVI 88 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-----GCCGGGCCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-----hcccCcCCCEE
Confidence 56789999999999999999999878899999999999999999876544 469999999853 23433 69999
Q ss_pred EEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHh
Q 008457 151 TMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKE 230 (564)
Q Consensus 151 ~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 230 (564)
++..+-. +.+..++.+..+.|+|+|++++.-.. ..+.+++++.+
T Consensus 89 viaG~Gg----~~i~~Il~~~~~~L~~~~~lVlq~~~--------------------------------~~~~vr~~L~~ 132 (225)
T 3kr9_A 89 TIAGMGG----RLIARILEEGLGKLANVERLILQPNN--------------------------------REDDLRIWLQD 132 (225)
T ss_dssp EEEEECH----HHHHHHHHHTGGGCTTCCEEEEEESS--------------------------------CHHHHHHHHHH
T ss_pred EEcCCCh----HHHHHHHHHHHHHhCCCCEEEEECCC--------------------------------CHHHHHHHHHH
Confidence 8765422 45778999999999999999985221 46788999999
Q ss_pred CCCcEEEeeee
Q 008457 231 NGFDVEELGLC 241 (564)
Q Consensus 231 aGf~~~~~~~~ 241 (564)
.||.++.....
T Consensus 133 ~Gf~i~~e~lv 143 (225)
T 3kr9_A 133 HGFQIVAESIL 143 (225)
T ss_dssp TTEEEEEEEEE
T ss_pred CCCEEEEEEEE
Confidence 99999876554
No 177
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.38 E-value=5e-12 Score=125.85 Aligned_cols=144 Identities=11% Similarity=0.093 Sum_probs=110.6
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecC
Q 008457 360 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWG 439 (564)
Q Consensus 360 ~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~ 439 (564)
+...+.+.+.....+.++.+|||+|||+|.++..++...+.+|+++|+++.+++.+++++..+++. .++.+...|+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~ 150 (318)
T 2fk8_A 74 AQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTN---RSRQVLLQGWE 150 (318)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCS---SCEEEEESCGG
T ss_pred HHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---CceEEEECChH
Confidence 345566677776666788999999999998887777664559999999999999999999887653 45666655543
Q ss_pred CCccchhhhhhcCCCccEEEEeceeeCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccC------------
Q 008457 440 NRDHIEAIKEENNEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQV------------ 505 (564)
Q Consensus 440 ~~~~~~~~~~~~~~~fD~Ii~~d~~y~~--~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~------------ 505 (564)
+ + +++||+|++..++.+. .....+++.+.++| +|+| .+++.......
T Consensus 151 ~---------~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~ 211 (318)
T 2fk8_A 151 D---------F-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIM-PADG--------RMTVQSSVSYHPYEMAARGKKLS 211 (318)
T ss_dssp G---------C-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHS-CTTC--------EEEEEEEECCCHHHHHTTCHHHH
T ss_pred H---------C-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhc-CCCc--------EEEEEEeccCCchhhhhcccccc
Confidence 2 1 2689999999999887 78999999999999 9988 77766554221
Q ss_pred ---------------------ChhHHHHHHHHcCCeEEEEc
Q 008457 506 ---------------------DEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 506 ---------------------~~~~~~~~~~~~g~~~~~~~ 525 (564)
+...+.+.+++.||+++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 252 (318)
T 2fk8_A 212 FETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPL 252 (318)
T ss_dssp HHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCCCE
T ss_pred ccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEEEE
Confidence 23456677788899888765
No 178
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.38 E-value=2.6e-12 Score=122.51 Aligned_cols=130 Identities=18% Similarity=0.266 Sum_probs=101.0
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||||||+|.++..++..+..+|+++|+++.+++.++++... .++.+...|..+. ++++++
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~d~~~~-------~~~~~~ 107 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-------TGITYERADLDKL-------HLPQDS 107 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-------SSEEEEECCGGGC-------CCCTTC
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-------CCceEEEcChhhc-------cCCCCC
Confidence 46789999999999888777776555999999999999999987543 2456655554322 234578
Q ss_pred ccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----------------------c-------
Q 008457 455 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----------------------Q------- 504 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-----------------------~------- 504 (564)
||+|+++.++++..+...+++.+.++| +|+| .++++.... .
T Consensus 108 fD~v~~~~~l~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (243)
T 3bkw_A 108 FDLAYSSLALHYVEDVARLFRTVHQAL-SPGG--------HFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPR 178 (243)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHE-EEEE--------EEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEE
T ss_pred ceEEEEeccccccchHHHHHHHHHHhc-CcCc--------EEEEEeCCcccccCcCcceeecCCCceEEeecccccccce
Confidence 999999999999999999999999999 9988 676654210 0
Q ss_pred -------------CChhHHHHHHHHcCCeEEEEcCC
Q 008457 505 -------------VDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 505 -------------~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
.+...+.+.+.++||+++++.+.
T Consensus 179 ~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 179 KTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred eeeeccCceEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 13456778899999999998754
No 179
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.38 E-value=4.7e-12 Score=117.68 Aligned_cols=128 Identities=13% Similarity=0.115 Sum_probs=103.7
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++.+|||||||+|.++..+++.+|..+|+++|+++.+++.|+++....+ .++++.++|....- .+.++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~----~~~~~~D~Iv 95 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF----EEADNIDTIT 95 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC----CGGGCCCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc----ccccccCEEE
Confidence 56789999999999999999998777899999999999999999876544 46999999985421 1233799988
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhC
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKEN 231 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 231 (564)
+..+.. +.+..+|.+..+.|+++|.|+++... ..+.+++++.+.
T Consensus 96 iaGmGg----~lI~~IL~~~~~~l~~~~~lIlqp~~--------------------------------~~~~lr~~L~~~ 139 (230)
T 3lec_A 96 ICGMGG----RLIADILNNDIDKLQHVKTLVLQPNN--------------------------------REDDLRKWLAAN 139 (230)
T ss_dssp EEEECH----HHHHHHHHHTGGGGTTCCEEEEEESS--------------------------------CHHHHHHHHHHT
T ss_pred EeCCch----HHHHHHHHHHHHHhCcCCEEEEECCC--------------------------------ChHHHHHHHHHC
Confidence 755433 45778999999999999999986311 478899999999
Q ss_pred CCcEEEeeee
Q 008457 232 GFDVEELGLC 241 (564)
Q Consensus 232 Gf~~~~~~~~ 241 (564)
||.+++....
T Consensus 140 Gf~i~~E~lv 149 (230)
T 3lec_A 140 DFEIVAEDIL 149 (230)
T ss_dssp TEEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999876654
No 180
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=5e-12 Score=117.08 Aligned_cols=125 Identities=10% Similarity=0.113 Sum_probs=98.5
Q ss_pred CCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCcc
Q 008457 377 GKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFE 456 (564)
Q Consensus 377 ~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD 456 (564)
+.+|||+|||+|.++..++.. +.+|+++|+++.+++.++++. .++.+...|+.+. ++++++||
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-------~~~~~~fD 104 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQTH---------PSVTFHHGTITDL-------SDSPKRWA 104 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGG-------GGSCCCEE
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC---------CCCeEEeCccccc-------ccCCCCeE
Confidence 779999999999887777776 458999999999999999872 2345554444321 34567999
Q ss_pred EEEEeceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc--------------CChhHHHHHHHHcCCe
Q 008457 457 VILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------------VDEPSMLSAATQCGFR 520 (564)
Q Consensus 457 ~Ii~~d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~--------------~~~~~~~~~~~~~g~~ 520 (564)
+|++..++++.. ....+++.+.++| +|+| .++++..... .+...+.+.+.++||+
T Consensus 105 ~v~~~~~l~~~~~~~~~~~l~~~~~~L-~pgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 175 (203)
T 3h2b_A 105 GLLAWYSLIHMGPGELPDALVALRMAV-EDGG--------GLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQ 175 (203)
T ss_dssp EEEEESSSTTCCTTTHHHHHHHHHHTE-EEEE--------EEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEE
T ss_pred EEEehhhHhcCCHHHHHHHHHHHHHHc-CCCc--------EEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCc
Confidence 999999998864 8999999999999 9988 7777664422 3456788999999999
Q ss_pred EEEEcCC
Q 008457 521 LVDKWPS 527 (564)
Q Consensus 521 ~~~~~~~ 527 (564)
++++...
T Consensus 176 ~~~~~~~ 182 (203)
T 3h2b_A 176 VTSSHWD 182 (203)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998754
No 181
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.38 E-value=8.9e-13 Score=120.72 Aligned_cols=111 Identities=15% Similarity=0.166 Sum_probs=87.5
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||||||+|.++..++..+..+|+++|+|+.+++.+++|+..++. .++.+...|+.+. ...+..++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~v~~~~~d~~~~-----~~~~~~~~ 113 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL----SGATLRRGAVAAV-----VAAGTTSP 113 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC----SCEEEEESCHHHH-----HHHCCSSC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC----CceEEEEccHHHH-----HhhccCCC
Confidence 47889999999999888877777777999999999999999999999876 3566665554321 11233679
Q ss_pred ccEEEEeceeeCC--CChHHHHHHHHH--HhhccCCCCCCCCCcEEEEEEeecc
Q 008457 455 FEVILGTDVSYIP--EAILPLFATAKE--LTASSNKSLREDQQPAFILCHIFRQ 504 (564)
Q Consensus 455 fD~Ii~~d~~y~~--~~~~~l~~~~~~--ll~~~~g~~~~~~~~~~~~~~~~r~ 504 (564)
||+|++..+ |+. .....+++.+.+ +| +|+| .+++.+..+.
T Consensus 114 fD~i~~~~p-~~~~~~~~~~~l~~~~~~~~L-~pgG--------~l~~~~~~~~ 157 (189)
T 3p9n_A 114 VDLVLADPP-YNVDSADVDAILAALGTNGWT-REGT--------VAVVERATTC 157 (189)
T ss_dssp CSEEEECCC-TTSCHHHHHHHHHHHHHSSSC-CTTC--------EEEEEEETTS
T ss_pred ccEEEECCC-CCcchhhHHHHHHHHHhcCcc-CCCe--------EEEEEecCCC
Confidence 999987554 554 678999999999 99 9988 8888776654
No 182
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.37 E-value=1.4e-12 Score=125.82 Aligned_cols=148 Identities=15% Similarity=0.200 Sum_probs=94.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCee-EEEecCCcccccCCCCCCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVS-TFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~-~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
.++.+|||||||||.++..+++.. ..+|+|+|+|+.|++.+.++.. ++. +...++..... ..++..+||+|++
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~~~----rv~~~~~~ni~~l~~-~~l~~~~fD~v~~ 157 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQDD----RVRSMEQYNFRYAEP-VDFTEGLPSFASI 157 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHTCT----TEEEECSCCGGGCCG-GGCTTCCCSEEEE
T ss_pred ccccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhCc----ccceecccCceecch-hhCCCCCCCEEEE
Confidence 467899999999999999998872 4589999999999988544321 121 11223321111 1234456999999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENG 232 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 232 (564)
..+++++ ..+|.+++++|||||.+++.... ... . ....+... -.. .....+....+++.+++.++|
T Consensus 158 d~sf~sl-----~~vL~e~~rvLkpGG~lv~lvkP--qfe---~--~~~~~~~~-G~v-rd~~~~~~~~~~v~~~~~~~G 223 (291)
T 3hp7_A 158 DVSFISL-----NLILPALAKILVDGGQVVALVKP--QFE---A--GREQIGKN-GIV-RESSIHEKVLETVTAFAVDYG 223 (291)
T ss_dssp CCSSSCG-----GGTHHHHHHHSCTTCEEEEEECG--GGT---S--CGGGCC-C-CCC-CCHHHHHHHHHHHHHHHHHTT
T ss_pred EeeHhhH-----HHHHHHHHHHcCcCCEEEEEECc--ccc---c--ChhhcCCC-Ccc-CCHHHHHHHHHHHHHHHHHCC
Confidence 8888765 46899999999999999986311 100 0 00000000 000 001122457889999999999
Q ss_pred CcEEEeeee
Q 008457 233 FDVEELGLC 241 (564)
Q Consensus 233 f~~~~~~~~ 241 (564)
|.+..+...
T Consensus 224 f~v~~~~~s 232 (291)
T 3hp7_A 224 FSVKGLDFS 232 (291)
T ss_dssp EEEEEEEEC
T ss_pred CEEEEEEEC
Confidence 998765443
No 183
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.37 E-value=2.9e-12 Score=123.40 Aligned_cols=133 Identities=18% Similarity=0.113 Sum_probs=104.2
Q ss_pred HhhhccCCCCCeEEEEcCCccccHHHHHHh-CCCcEEEEEeCChHHHHHHHhccccc--CCCeeEEEecCCcccccCCCC
Q 008457 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 67 ~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~~iD~s~~~l~~a~~~~~~~--~~~i~~~~~d~~~~~~~~~~~ 143 (564)
+.+.+...++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|+++.... ..++.+...|+... +++
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~----~~~ 163 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA----ELE 163 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC----CCC
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc----CCC
Confidence 344455578899999999999999999998 67889999999999999999886433 36789999998643 356
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHH
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDF 223 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (564)
+++||+|++. .+ ++..+++++.++|+|||.+++..+... ...+
T Consensus 164 ~~~~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~~~------------------------------~~~~ 206 (258)
T 2pwy_A 164 EAAYDGVALD-----LM--EPWKVLEKAALALKPDRFLVAYLPNIT------------------------------QVLE 206 (258)
T ss_dssp TTCEEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESCHH------------------------------HHHH
T ss_pred CCCcCEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCCHH------------------------------HHHH
Confidence 7889999983 32 445789999999999999999764320 2346
Q ss_pred HHHHHHhCCCcEEEeee
Q 008457 224 LTSLFKENGFDVEELGL 240 (564)
Q Consensus 224 l~~~l~~aGf~~~~~~~ 240 (564)
+.+.+++.||..++...
T Consensus 207 ~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 207 LVRAAEAHPFRLERVLE 223 (258)
T ss_dssp HHHHHTTTTEEEEEEEE
T ss_pred HHHHHHHCCCceEEEEE
Confidence 66778889998776543
No 184
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.37 E-value=7.3e-12 Score=120.41 Aligned_cols=107 Identities=16% Similarity=0.178 Sum_probs=83.5
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcC---CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGS---ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 451 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~---~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~ 451 (564)
.++.+|||||||+|.++..++... ..+|+++|+|+.|++.+++++...+.. .++.+...|..+ ++
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~---~~v~~~~~D~~~---------~~ 136 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP---TPVDVIEGDIRD---------IA 136 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS---SCEEEEESCTTT---------CC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC---ceEEEeeccccc---------cc
Confidence 378899999999997777777643 358999999999999999999876653 467766555432 23
Q ss_pred CCCccEEEEeceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 452 NEGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 452 ~~~fD~Ii~~d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
.+.||+|+++-++.+.. ....+++.+.++| +|+| .++++...
T Consensus 137 ~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~L-kpGG--------~lii~e~~ 180 (261)
T 4gek_A 137 IENASMVVLNFTLQFLEPSERQALLDKIYQGL-NPGG--------ALVLSEKF 180 (261)
T ss_dssp CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEEEB
T ss_pred ccccccceeeeeeeecCchhHhHHHHHHHHHc-CCCc--------EEEEEecc
Confidence 45799999998887643 4467899999999 9988 88877543
No 185
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.36 E-value=4.5e-12 Score=120.83 Aligned_cols=138 Identities=16% Similarity=0.125 Sum_probs=105.9
Q ss_pred HHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCcc
Q 008457 364 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 443 (564)
Q Consensus 364 l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~ 443 (564)
+..++.... .++.+|||||||+|.++..++.. +.+|+++|+++.+++.++++.. ..++.+...|..+.
T Consensus 43 ~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~-- 110 (242)
T 3l8d_A 43 IIPFFEQYV--KKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERGE-------GPDLSFIKGDLSSL-- 110 (242)
T ss_dssp HHHHHHHHS--CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTTC-------BTTEEEEECBTTBC--
T ss_pred HHHHHHHHc--CCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhcc-------cCCceEEEcchhcC--
Confidence 344554432 26789999999999887777766 5589999999999999988741 14577777666533
Q ss_pred chhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------------
Q 008457 444 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-------------------- 503 (564)
Q Consensus 444 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-------------------- 503 (564)
++++++||+|++..++++..+...+++.+.++| +|+| .++++....
T Consensus 111 -----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L-~pgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (242)
T 3l8d_A 111 -----PFENEQFEAIMAINSLEWTEEPLRALNEIKRVL-KSDG--------YACIAILGPTAKPRENSYPRLYGKDVVCN 176 (242)
T ss_dssp -----SSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHE-EEEE--------EEEEEEECTTCGGGGGGGGGGGTCCCSSC
T ss_pred -----CCCCCCccEEEEcChHhhccCHHHHHHHHHHHh-CCCe--------EEEEEEcCCcchhhhhhhhhhcccccccc
Confidence 234679999999999999999999999999999 9988 777776321
Q ss_pred cCChhHHHHHHHHcCCeEEEEcCC
Q 008457 504 QVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 504 ~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
..+...+.+.+.++||++++...+
T Consensus 177 ~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 177 TMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCHHHHHHHHHHcCCEEEEeecc
Confidence 123346788889999999987644
No 186
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.36 E-value=1.1e-11 Score=114.87 Aligned_cols=127 Identities=9% Similarity=0.058 Sum_probs=96.2
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
...++.+|||||||+|.++..++.. +.+|+++|+++.+++.+++|+..++.. +++.+..-|..+. +. ..
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~---~~v~~~~~d~~~~-----~~--~~ 120 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLS---PRMRAVQGTAPAA-----LA--DL 120 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEESCTTGG-----GT--TS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCC---CCEEEEeCchhhh-----cc--cC
Confidence 3457889999999999888777776 779999999999999999999998763 3577665554321 11 12
Q ss_pred CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 453 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
..||+|++...+ ..+ +++.+.++| +|+| .+++..... .....+.+.+++.|+++.++.
T Consensus 121 ~~~D~v~~~~~~----~~~-~l~~~~~~L-kpgG--------~lv~~~~~~-~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 121 PLPEAVFIGGGG----SQA-LYDRLWEWL-APGT--------RIVANAVTL-ESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp CCCSEEEECSCC----CHH-HHHHHHHHS-CTTC--------EEEEEECSH-HHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCEEEECCcc----cHH-HHHHHHHhc-CCCc--------EEEEEecCc-ccHHHHHHHHHhCCCcEEEEE
Confidence 479999966533 455 999999999 9988 777765443 223467888889999988875
No 187
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.35 E-value=6.6e-12 Score=122.19 Aligned_cols=129 Identities=17% Similarity=0.223 Sum_probs=99.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++.+|||+|||+|.++..+++.++. +|+|+|+|+.+++.|+++....+ .+++++++|+.... ++++||+|+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~-----~~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-----GENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-----CCSCEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc-----ccCCccEEE
Confidence 56899999999999999999998543 79999999999999998765433 35889999986532 267899999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhC
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKEN 231 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 231 (564)
+... .....++.++.++|||||.+++.+........ .-..+.+.+.++++
T Consensus 198 ~~~p------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~------------------------~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 198 MGYV------VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP------------------------REPFETFKRITKEY 247 (278)
T ss_dssp ECCC------SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT------------------------TTTHHHHHHHHHHT
T ss_pred ECCc------hhHHHHHHHHHHHCCCCeEEEEEEeecccccc------------------------ccHHHHHHHHHHHc
Confidence 9543 12356899999999999999997654311100 01467788999999
Q ss_pred CCcEEEe
Q 008457 232 GFDVEEL 238 (564)
Q Consensus 232 Gf~~~~~ 238 (564)
||.+...
T Consensus 248 G~~~~~~ 254 (278)
T 2frn_A 248 GYDVEKL 254 (278)
T ss_dssp TCEEEEE
T ss_pred CCeeEEe
Confidence 9987653
No 188
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.35 E-value=1.6e-12 Score=132.69 Aligned_cols=120 Identities=12% Similarity=0.099 Sum_probs=89.9
Q ss_pred HHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHH-------HhcccccC---CCeeEEEecC
Q 008457 64 DKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLV-------MTHKDFTE---TRVSTFVCDL 133 (564)
Q Consensus 64 ~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a-------~~~~~~~~---~~i~~~~~d~ 133 (564)
...+.+.+...++.+|||||||+|.++..+++..+..+|+|+|+++.+++.| +++....+ .+++++++|.
T Consensus 231 v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~ 310 (433)
T 1u2z_A 231 LSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS 310 (433)
T ss_dssp HHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc
Confidence 3444555566789999999999999999999976556899999999999988 66654333 5788888764
Q ss_pred CcccccCCCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEec
Q 008457 134 ISDDLSRQISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 134 ~~~~~~~~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
.......+...++||+|+++.++ +. .++..+|+++.++|||||.+++.+.
T Consensus 311 ~~~~~~~~~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp STTCHHHHHHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred cccccccccccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEeec
Confidence 32111000023689999998766 33 4778899999999999999998653
No 189
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.35 E-value=1.4e-12 Score=120.67 Aligned_cols=108 Identities=11% Similarity=0.084 Sum_probs=85.5
Q ss_pred CCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC---CCeeEEEecCCcccccCCCCCCc-eeEE
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE---TRVSTFVCDLISDDLSRQISPSS-IDIV 150 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~---~~i~~~~~d~~~~~~~~~~~~~~-fD~V 150 (564)
++.+|||+|||+|.++..++... ..+|+|+|+|+.|++.|+++....+ .+++++++|+.... ..+++++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL--KQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT--TSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH--HhhccCCCCCEE
Confidence 57899999999999999877773 3589999999999999998875444 47899999985421 1223578 9999
Q ss_pred EEcccccCCChhHHHHHHHHH--HhccCCCeEEEEEecCC
Q 008457 151 TMVFVLSAVSPEKMSLVLQNI--KKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 151 ~~~~vl~~~~~~~~~~~l~~~--~r~LkpgG~lii~~~~~ 188 (564)
++...++ . .+...+++.+ .++|+|||.+++.....
T Consensus 130 ~~~~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 130 FLDPPFH-F--NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EECCCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EECCCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 9988754 3 4677888888 67899999999876543
No 190
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.35 E-value=3.2e-13 Score=121.35 Aligned_cols=109 Identities=10% Similarity=0.037 Sum_probs=81.9
Q ss_pred CCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEcc
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMVF 154 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~~ 154 (564)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++....+.++++.++|+.......+-..++||+|+++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT--CEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 67899999999999999999884 4599999999999999988754444788998887542110011134899999987
Q ss_pred cccCCChhHHHHHHHHHH--hccCCCeEEEEEecCCC
Q 008457 155 VLSAVSPEKMSLVLQNIK--KVLKPTGYVLFRDYAIG 189 (564)
Q Consensus 155 vl~~~~~~~~~~~l~~~~--r~LkpgG~lii~~~~~~ 189 (564)
.++ - ....+++.+. ++|+|||.+++......
T Consensus 119 ~~~-~---~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 119 PYA-M---DLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CTT-S---CTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred CCc-h---hHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 765 2 2234555555 99999999999876543
No 191
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.35 E-value=1.6e-12 Score=129.41 Aligned_cols=103 Identities=19% Similarity=0.268 Sum_probs=80.0
Q ss_pred CCCCeEEEEcCC------ccccHHHHHHh-CCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCC--CC
Q 008457 74 AGRKDVLEVGCG------AGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQI--SP 144 (564)
Q Consensus 74 ~~~~~VLDiGcG------~G~~~~~l~~~-~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~--~~ 144 (564)
.++.+||||||| +|..+..+++. +|+.+|+|+|+|+.|. ....+++|+++|+.+..+...+ .+
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hcCCCcEEEEecccccchhhhhhccc
Confidence 467899999999 77777777665 5889999999999972 1246899999999754321000 15
Q ss_pred CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 145 SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
++||+|++..+ |++ .++..+|++++++|||||++++.+..
T Consensus 287 ~sFDlVisdgs-H~~--~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 287 GPFDIVIDDGS-HIN--AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CCEEEEEECSC-CCH--HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CCccEEEECCc-ccc--hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 79999999754 554 57889999999999999999998765
No 192
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=3.2e-12 Score=119.57 Aligned_cols=112 Identities=15% Similarity=0.068 Sum_probs=89.7
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~ 142 (564)
..+.+.+...++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|+++....+ .++.+..+|+... +.
T Consensus 67 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~--- 142 (215)
T 2yxe_A 67 GMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLG-YE--- 142 (215)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGC-CG---
T ss_pred HHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC-CC---
Confidence 344555666788999999999999999999885 45899999999999999998765333 4688988887421 11
Q ss_pred CCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCC
Q 008457 143 SPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
..++||+|++..+++|++ .++.++|||||.+++.....
T Consensus 143 ~~~~fD~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 143 PLAPYDRIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp GGCCEEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEESSS
T ss_pred CCCCeeEEEECCchHHHH--------HHHHHHcCCCcEEEEEECCC
Confidence 257899999999999985 37899999999999986543
No 193
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.35 E-value=3.7e-12 Score=122.31 Aligned_cols=140 Identities=21% Similarity=0.209 Sum_probs=103.9
Q ss_pred echhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEe
Q 008457 357 LWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 436 (564)
Q Consensus 357 ~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l 436 (564)
..+.+....+++... ..++.+|||+|||+|.++..++..+. +|+++|+++.+++.+++|+..|+.. +.+...
T Consensus 103 ~~~tt~~~~~~l~~~--~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~-----v~~~~~ 174 (254)
T 2nxc_A 103 HHETTRLALKALARH--LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR-----PRFLEG 174 (254)
T ss_dssp CSHHHHHHHHHHHHH--CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC-----CEEEES
T ss_pred CCHHHHHHHHHHHHh--cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc-----EEEEEC
Confidence 445666666666554 34678999999999988877776665 9999999999999999999998762 455443
Q ss_pred ecCCCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHH
Q 008457 437 EWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQ 516 (564)
Q Consensus 437 ~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 516 (564)
++.+ .++.++||+|+++-+ . ..+..+++.+.++| +|+| .++++...... ...+.+.+.+
T Consensus 175 d~~~--------~~~~~~fD~Vv~n~~-~--~~~~~~l~~~~~~L-kpgG--------~lils~~~~~~-~~~v~~~l~~ 233 (254)
T 2nxc_A 175 SLEA--------ALPFGPFDLLVANLY-A--ELHAALAPRYREAL-VPGG--------RALLTGILKDR-APLVREAMAG 233 (254)
T ss_dssp CHHH--------HGGGCCEEEEEEECC-H--HHHHHHHHHHHHHE-EEEE--------EEEEEEEEGGG-HHHHHHHHHH
T ss_pred Chhh--------cCcCCCCCEEEECCc-H--HHHHHHHHHHHHHc-CCCC--------EEEEEeeccCC-HHHHHHHHHH
Confidence 3321 133568999997532 2 23678999999999 9988 78876554432 3467888889
Q ss_pred cCCeEEEEc
Q 008457 517 CGFRLVDKW 525 (564)
Q Consensus 517 ~g~~~~~~~ 525 (564)
.||++.++.
T Consensus 234 ~Gf~~~~~~ 242 (254)
T 2nxc_A 234 AGFRPLEEA 242 (254)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEe
Confidence 999998875
No 194
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.34 E-value=4.9e-12 Score=117.89 Aligned_cols=125 Identities=17% Similarity=0.172 Sum_probs=96.9
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||+|||+|.++..++.. +.+|+++|+++.+++.+++++. +.+...+..+. + ..++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~----------~~~~~~d~~~~-------~-~~~~ 102 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRLG----------RPVRTMLFHQL-------D-AIDA 102 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHT----------SCCEECCGGGC-------C-CCSC
T ss_pred CCCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhcC----------CceEEeeeccC-------C-CCCc
Confidence 36789999999999887777766 4589999999999999999871 12222222211 1 4578
Q ss_pred ccEEEEeceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc-------------CChhHHHHHHHHcC-
Q 008457 455 FEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------VDEPSMLSAATQCG- 518 (564)
Q Consensus 455 fD~Ii~~d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~-------------~~~~~~~~~~~~~g- 518 (564)
||+|+++.++++.. ....+++.+.++| +|+| .++++..... .+...+.+.++++|
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~ 173 (211)
T 3e23_A 103 YDAVWAHACLLHVPRDELADVLKLIWRAL-KPGG--------LFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGT 173 (211)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCC
T ss_pred EEEEEecCchhhcCHHHHHHHHHHHHHhc-CCCc--------EEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCC
Confidence 99999999998876 8889999999999 9988 7777765432 24567888899999
Q ss_pred CeEEEEcCC
Q 008457 519 FRLVDKWPS 527 (564)
Q Consensus 519 ~~~~~~~~~ 527 (564)
|+++++...
T Consensus 174 f~~~~~~~~ 182 (211)
T 3e23_A 174 WASVAVESS 182 (211)
T ss_dssp CSEEEEEEE
T ss_pred cEEEEEEec
Confidence 999988644
No 195
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.34 E-value=5e-12 Score=114.04 Aligned_cols=106 Identities=17% Similarity=0.222 Sum_probs=83.1
Q ss_pred CCCCCeEEEEcCCccccHHHHHHh-CCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCccc----ccCCCCCCce
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDD----LSRQISPSSI 147 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~----~~~~~~~~~f 147 (564)
..++.+|||+|||+|.++..+++. .++.+++++|+++ +++. .++++.++|+.... +...+++++|
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKALLERVGDSKV 89 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHHHHHHHTTCCE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------CcEEEEEcccccchhhhhhhccCCCCce
Confidence 367889999999999999999988 4678999999999 6432 46888899986543 1001466899
Q ss_pred eEEEEcccccCCChh---H------HHHHHHHHHhccCCCeEEEEEecCC
Q 008457 148 DIVTMVFVLSAVSPE---K------MSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 148 D~V~~~~vl~~~~~~---~------~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
|+|+++.++++.+.. . ...+++++.++|+|||.+++..+..
T Consensus 90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 999999988877422 1 1689999999999999999976543
No 196
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.34 E-value=2.7e-12 Score=120.35 Aligned_cols=104 Identities=11% Similarity=0.104 Sum_probs=83.6
Q ss_pred CCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC---CCeeEEEecCCcccccCCCCCCceeEE
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE---TRVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~---~~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|+++....+ .+++++++|+.... ..+++++||+|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l--~~~~~~~fD~V 133 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM--SRLANDSYQLV 133 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG--GGSCTTCEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH--HHhcCCCcCeE
Confidence 445999999999999999999754 7899999999999999999875433 46999999875421 12346899999
Q ss_pred EEcccccCCChhHHHHHHHHHHhccCCCeEEEEEe
Q 008457 151 TMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 151 ~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
++.... .+...+++++.++|||||++++.+
T Consensus 134 ~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 134 FGQVSP-----MDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp EECCCT-----TTHHHHHHHHHHHEEEEEEEEETT
T ss_pred EEcCcH-----HHHHHHHHHHHHHcCCCcEEEEeC
Confidence 986542 345678999999999999999843
No 197
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.34 E-value=5.8e-12 Score=121.36 Aligned_cols=150 Identities=15% Similarity=0.096 Sum_probs=108.0
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHh---cCCCCCCCceEEE
Q 008457 359 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTA---NLKPPFLAKLITK 434 (564)
Q Consensus 359 ~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~---n~~~~~~~~i~~~ 434 (564)
..+.+|+.|+. ..++.+|||||||+|.++..++... ..+|+++|+++.+++.+++|+.. |++. +++.+.
T Consensus 23 ~D~~lL~~~~~----~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~---~~v~~~ 95 (260)
T 2ozv_A 23 MDAMLLASLVA----DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFS---ARIEVL 95 (260)
T ss_dssp CHHHHHHHTCC----CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTG---GGEEEE
T ss_pred cHHHHHHHHhc----ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCc---ceEEEE
Confidence 56777777753 3367799999999998888888776 46999999999999999999988 7663 468888
Q ss_pred EeecCCCccchhh-hhhcCCCccEEEEeceeeCC------------------CChHHHHHHHHHHhhccCCCCCCCCCcE
Q 008457 435 RLEWGNRDHIEAI-KEENNEGFEVILGTDVSYIP------------------EAILPLFATAKELTASSNKSLREDQQPA 495 (564)
Q Consensus 435 ~l~w~~~~~~~~~-~~~~~~~fD~Ii~~d~~y~~------------------~~~~~l~~~~~~ll~~~~g~~~~~~~~~ 495 (564)
..|+.+... ... ..+..++||+|+++...+.. ..+..+++.+.++| +|+| .
T Consensus 96 ~~D~~~~~~-~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~L-kpgG--------~ 165 (260)
T 2ozv_A 96 EADVTLRAK-ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIM-VSGG--------Q 165 (260)
T ss_dssp ECCTTCCHH-HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHE-EEEE--------E
T ss_pred eCCHHHHhh-hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHc-CCCC--------E
Confidence 777754310 000 01345789999987544432 24789999999999 9988 8
Q ss_pred EEEEEeeccCChhHHHHHHHHcCCeEEEEcCCC
Q 008457 496 FILCHIFRQVDEPSMLSAATQCGFRLVDKWPSK 528 (564)
Q Consensus 496 ~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~~~~ 528 (564)
+++.+...+ ...+++.+.+. |...++..+.
T Consensus 166 l~~~~~~~~--~~~~~~~l~~~-~~~~~i~~v~ 195 (260)
T 2ozv_A 166 LSLISRPQS--VAEIIAACGSR-FGGLEITLIH 195 (260)
T ss_dssp EEEEECGGG--HHHHHHHHTTT-EEEEEEEEEE
T ss_pred EEEEEcHHH--HHHHHHHHHhc-CCceEEEEEc
Confidence 887765543 34577777764 8777775543
No 198
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.34 E-value=8e-12 Score=117.11 Aligned_cols=127 Identities=8% Similarity=0.058 Sum_probs=102.5
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCC-ceeEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPS-SIDIV 150 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~-~fD~V 150 (564)
.++.+|||||||+|.++..+++.+|..+|+++|+++.+++.|+++....+ .++++.++|.... +..+ +||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~-----~~~~~~~D~I 94 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAV-----IEKKDAIDTI 94 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG-----CCGGGCCCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhc-----cCccccccEE
Confidence 56789999999999999999998777799999999999999999876544 4689999998542 2333 59999
Q ss_pred EEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHh
Q 008457 151 TMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKE 230 (564)
Q Consensus 151 ~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 230 (564)
++..+-- +.+..+|.+..+.|+++|+|++.-.. ..+.+++++.+
T Consensus 95 viagmGg----~lI~~IL~~~~~~L~~~~~lIlq~~~--------------------------------~~~~lr~~L~~ 138 (244)
T 3gnl_A 95 VIAGMGG----TLIRTILEEGAAKLAGVTKLILQPNI--------------------------------AAWQLREWSEQ 138 (244)
T ss_dssp EEEEECH----HHHHHHHHHTGGGGTTCCEEEEEESS--------------------------------CHHHHHHHHHH
T ss_pred EEeCCch----HHHHHHHHHHHHHhCCCCEEEEEcCC--------------------------------ChHHHHHHHHH
Confidence 8754433 45778999999999999999986311 47788999999
Q ss_pred CCCcEEEeeee
Q 008457 231 NGFDVEELGLC 241 (564)
Q Consensus 231 aGf~~~~~~~~ 241 (564)
.||.+++....
T Consensus 139 ~Gf~i~~E~lv 149 (244)
T 3gnl_A 139 NNWLITSEAIL 149 (244)
T ss_dssp HTEEEEEEEEE
T ss_pred CCCEEEEEEEE
Confidence 99999775544
No 199
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.34 E-value=2e-12 Score=122.55 Aligned_cols=110 Identities=12% Similarity=0.171 Sum_probs=88.6
Q ss_pred hccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCC-CCCCc
Q 008457 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQ-ISPSS 146 (564)
Q Consensus 70 ~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~-~~~~~ 146 (564)
++...++.+|||||||+|..+..+++..++.+|+++|+++.+++.|+++....+ .+++++++|+.... + ..+++
T Consensus 66 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~~ 142 (232)
T 3ntv_A 66 LIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQF---ENVNDKV 142 (232)
T ss_dssp HHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCH---HHHTTSC
T ss_pred HHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHH---HhhccCC
Confidence 333357899999999999999999997778999999999999999999875444 47999999986431 1 12678
Q ss_pred eeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 147 IDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 147 fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
||+|++.... .....+++++.++|||||++++.+..
T Consensus 143 fD~V~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 143 YDMIFIDAAK-----AQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp EEEEEEETTS-----SSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred ccEEEEcCcH-----HHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 9999986542 34667999999999999999885443
No 200
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.34 E-value=1.9e-12 Score=122.10 Aligned_cols=145 Identities=14% Similarity=0.209 Sum_probs=90.4
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc----CCCeeEEEecCCcccccCCCCCCceeE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT----ETRVSTFVCDLISDDLSRQISPSSIDI 149 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~----~~~i~~~~~d~~~~~~~~~~~~~~fD~ 149 (564)
.++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.|+++.... ..++.+... .++ +...||.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~d~ 106 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVL----ADF----EQGRPSF 106 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCG----GGC----CSCCCSE
T ss_pred CCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCH----hHc----CcCCCCE
Confidence 457799999999999999999882 249999999999999987754311 112222110 111 2223455
Q ss_pred EEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHH
Q 008457 150 VTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFK 229 (564)
Q Consensus 150 V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 229 (564)
+.+..++.++ ..++++++++|||||.+++.. .+... .. ...+...-.. .....+..+.+++.++++
T Consensus 107 ~~~D~v~~~l-----~~~l~~i~rvLkpgG~lv~~~--~p~~e-~~----~~~~~~~G~~--~d~~~~~~~~~~l~~~l~ 172 (232)
T 3opn_A 107 TSIDVSFISL-----DLILPPLYEILEKNGEVAALI--KPQFE-AG----REQVGKNGII--RDPKVHQMTIEKVLKTAT 172 (232)
T ss_dssp EEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEE--CHHHH-SC----HHHHC-CCCC--CCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEhhhH-----HHHHHHHHHhccCCCEEEEEE--Ccccc-cC----HHHhCcCCee--cCcchhHHHHHHHHHHHH
Confidence 5555555444 468999999999999999864 11110 00 0000000000 011222357899999999
Q ss_pred hCCCcEEEeeee
Q 008457 230 ENGFDVEELGLC 241 (564)
Q Consensus 230 ~aGf~~~~~~~~ 241 (564)
++||+++.+...
T Consensus 173 ~aGf~v~~~~~~ 184 (232)
T 3opn_A 173 QLGFSVKGLTFS 184 (232)
T ss_dssp HHTEEEEEEEEC
T ss_pred HCCCEEEEEEEc
Confidence 999998876654
No 201
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.33 E-value=4.3e-12 Score=127.13 Aligned_cols=109 Identities=19% Similarity=0.143 Sum_probs=86.9
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~ 143 (564)
.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+ |++.|+++....+ .+++++++|+... +++
T Consensus 55 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~ 128 (340)
T 2fyt_A 55 FIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV----HLP 128 (340)
T ss_dssp HHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS----CCS
T ss_pred HHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh----cCC
Confidence 33344444678999999999999999998873 45999999997 9999988765433 5799999998653 346
Q ss_pred CCceeEEEEccc---ccCCChhHHHHHHHHHHhccCCCeEEE
Q 008457 144 PSSIDIVTMVFV---LSAVSPEKMSLVLQNIKKVLKPTGYVL 182 (564)
Q Consensus 144 ~~~fD~V~~~~v---l~~~~~~~~~~~l~~~~r~LkpgG~li 182 (564)
+++||+|++..+ +.+. ..+..++.++.++|||||.++
T Consensus 129 ~~~~D~Ivs~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 129 VEKVDVIISEWMGYFLLFE--SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CSCEEEEEECCCBTTBTTT--CHHHHHHHHHHHHEEEEEEEE
T ss_pred CCcEEEEEEcCchhhccCH--HHHHHHHHHHHhhcCCCcEEE
Confidence 789999999773 4444 477889999999999999998
No 202
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.33 E-value=1.4e-11 Score=116.98 Aligned_cols=142 Identities=18% Similarity=0.140 Sum_probs=106.1
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCc
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 442 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~ 442 (564)
.+.+++.... .++.+|||+|||+|.++..++. .+.+|+++|+++.+++.+++++..++.. .++.+...|+.+..
T Consensus 55 ~l~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~~ 128 (235)
T 3lcc_A 55 LIVHLVDTSS--LPLGRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKA---EYFSFVKEDVFTWR 128 (235)
T ss_dssp HHHHHHHTTC--SCCEEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGG---GGEEEECCCTTTCC
T ss_pred HHHHHHHhcC--CCCCCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCC---cceEEEECchhcCC
Confidence 4555554432 2446999999999977766654 4568999999999999999998764432 45777777765431
Q ss_pred cchhhhhhcCCCccEEEEeceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec---------cCChhHHH
Q 008457 443 HIEAIKEENNEGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFR---------QVDEPSML 511 (564)
Q Consensus 443 ~~~~~~~~~~~~fD~Ii~~d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r---------~~~~~~~~ 511 (564)
+..+||+|+++.++++.. ....+++.+.++| +|+| .+++..... ..+...+.
T Consensus 129 --------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (235)
T 3lcc_A 129 --------PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELL-KPDG--------ELITLMYPITDHVGGPPYKVDVSTFE 191 (235)
T ss_dssp --------CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHE-EEEE--------EEEEEECCCSCCCSCSSCCCCHHHHH
T ss_pred --------CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHC-CCCc--------EEEEEEecccccCCCCCccCCHHHHH
Confidence 345899999999988766 8999999999999 9988 666654322 12345778
Q ss_pred HHHHHcCCeEEEEcCC
Q 008457 512 SAATQCGFRLVDKWPS 527 (564)
Q Consensus 512 ~~~~~~g~~~~~~~~~ 527 (564)
+.+.++||+++++...
T Consensus 192 ~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 192 EVLVPIGFKAVSVEEN 207 (235)
T ss_dssp HHHGGGTEEEEEEEEC
T ss_pred HHHHHcCCeEEEEEec
Confidence 8888999999988654
No 203
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.33 E-value=1.5e-11 Score=116.48 Aligned_cols=129 Identities=16% Similarity=0.222 Sum_probs=99.1
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
..++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++++..++ ++.+...|..+. +..
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~d~~~~-------~~~- 107 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL------KVKYIEADYSKY-------DFE- 107 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT------TEEEEESCTTTC-------CCC-
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC------CEEEEeCchhcc-------CCC-
Confidence 4577899999999998888777765 5699999999999999999865432 567776665543 112
Q ss_pred CCccEEEEeceeeCCCChH--HHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc--------------------------
Q 008457 453 EGFEVILGTDVSYIPEAIL--PLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------------------- 504 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~--~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~-------------------------- 504 (564)
++||+|++..++++..... .+++.+.++| +|+| .++++.....
T Consensus 108 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (234)
T 3dtn_A 108 EKYDMVVSALSIHHLEDEDKKELYKRSYSIL-KESG--------IFINADLVHGETAFIENLNKTIWRQYVENSGLTEEE 178 (234)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHH
T ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHHhc-CCCc--------EEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHH
Confidence 6899999999998886554 5999999999 9988 7777653321
Q ss_pred -------------CChhHHHHHHHHcCCeEEEEc
Q 008457 505 -------------VDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 505 -------------~~~~~~~~~~~~~g~~~~~~~ 525 (564)
.+...+.+.++++||+.++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 212 (234)
T 3dtn_A 179 IAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCI 212 (234)
T ss_dssp HHTTC----CCCCCBHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHhcccccccCHHHHHHHHHHcCCCceeee
Confidence 122355668899999999886
No 204
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.33 E-value=3.2e-12 Score=121.19 Aligned_cols=109 Identities=19% Similarity=0.258 Sum_probs=84.0
Q ss_pred ccCCCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeE
Q 008457 71 FSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDI 149 (564)
Q Consensus 71 l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~ 149 (564)
+...++.+|||+|||+|.++..+++.. |+.+|+|+|+|+.+++.+.+..... .++.+.++|+..... .++.+++||+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~-~~~~~~~~D~ 150 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHK-YRMLIAMVDV 150 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGG-GGGGCCCEEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhh-hcccCCcEEE
Confidence 334678999999999999999999884 6689999999988776665544322 578999999875321 1335678999
Q ss_pred EEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEe
Q 008457 150 VTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 150 V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
|++... .++....++.++.++|||||.+++..
T Consensus 151 V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 151 IFADVA----QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp EEECCC----CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCC----CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 999554 22455677899999999999999953
No 205
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.33 E-value=5.6e-12 Score=122.95 Aligned_cols=138 Identities=19% Similarity=0.141 Sum_probs=96.8
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeC-ChHHHHHHHhcc-----cccC------CCeeEEEecCCccc--cc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDF-SPRAVNLVMTHK-----DFTE------TRVSTFVCDLISDD--LS 139 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~-s~~~l~~a~~~~-----~~~~------~~i~~~~~d~~~~~--~~ 139 (564)
.++.+|||+|||+|.++..+++.. ..+|+++|+ |+.+++.|+++. ...+ .++.+...+..... +.
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 567899999999999999888873 348999999 899999999876 3222 25777766654311 10
Q ss_pred CCCCCCceeEEEEcccccCCChhHHHHHHHHHHhccC---C--CeEEEEEecCCCchhhhhhcccccccccceeecCCCc
Q 008457 140 RQISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLK---P--TGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGT 214 (564)
Q Consensus 140 ~~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~Lk---p--gG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (564)
..++.++||+|++..+++|. .+...+++.+.++|+ | ||.+++........
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~----------------------- 211 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVTFTHHRPH----------------------- 211 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC---------------------------
T ss_pred hhccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecc-----------------------
Confidence 00135789999999999987 578899999999999 9 99887742221100
Q ss_pred eeeccCHHHHHHHHHhCC-CcEEEee
Q 008457 215 RAFYFSNDFLTSLFKENG-FDVEELG 239 (564)
Q Consensus 215 ~~~~~~~~~l~~~l~~aG-f~~~~~~ 239 (564)
.......+.+.+++.| |++..+.
T Consensus 212 --~~~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 212 --LAERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp ------CTHHHHHHHHSTTEEEEEEE
T ss_pred --cchhHHHHHHHHHhcCCEEEEEec
Confidence 0002345567888999 9887663
No 206
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=1e-11 Score=112.68 Aligned_cols=134 Identities=14% Similarity=0.153 Sum_probs=99.9
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCc
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 442 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~ 442 (564)
.+.+++.......++.+|||+|||+|.++..++. ...+|+++|+++.+++.+++|+..++. .++.+...|+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~d~~~-- 94 (183)
T 2yxd_A 22 EIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI----KNCQIIKGRAED-- 94 (183)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC----CSEEEEESCHHH--
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC----CcEEEEECCccc--
Confidence 3444444433445788999999999977777766 677999999999999999999998876 356666555432
Q ss_pred cchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEE
Q 008457 443 HIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLV 522 (564)
Q Consensus 443 ~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~ 522 (564)
.++.++||+|++..+ .....+++.+.++ |+| .+++...... ....+.+.+++.|+.++
T Consensus 95 ------~~~~~~~D~i~~~~~----~~~~~~l~~~~~~---~gG--------~l~~~~~~~~-~~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 95 ------VLDKLEFNKAFIGGT----KNIEKIIEILDKK---KIN--------HIVANTIVLE-NAAKIINEFESRGYNVD 152 (183)
T ss_dssp ------HGGGCCCSEEEECSC----SCHHHHHHHHHHT---TCC--------EEEEEESCHH-HHHHHHHHHHHTTCEEE
T ss_pred ------cccCCCCcEEEECCc----ccHHHHHHHHhhC---CCC--------EEEEEecccc-cHHHHHHHHHHcCCeEE
Confidence 233468999999888 6788888888877 777 7777654332 23467888899999888
Q ss_pred EEc
Q 008457 523 DKW 525 (564)
Q Consensus 523 ~~~ 525 (564)
.+.
T Consensus 153 ~~~ 155 (183)
T 2yxd_A 153 AVN 155 (183)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 207
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.33 E-value=5.2e-12 Score=113.38 Aligned_cols=122 Identities=16% Similarity=0.218 Sum_probs=95.3
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||+|||+|.++..++..+. +|+++|+++.+++.++++ . .++.+...| .+++.++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~--~-------~~v~~~~~d----------~~~~~~~ 75 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK--F-------DSVITLSDP----------KEIPDNS 75 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH--C-------TTSEEESSG----------GGSCTTC
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh--C-------CCcEEEeCC----------CCCCCCc
Confidence 3677999999999988877777665 999999999999999988 1 345554333 1345679
Q ss_pred ccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc-----------CChhHHHHHHHHcCCeEEE
Q 008457 455 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-----------VDEPSMLSAATQCGFRLVD 523 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~-----------~~~~~~~~~~~~~g~~~~~ 523 (564)
||+|+++.++++..+...+++.+.++| +|+| .+++....+. .+...+.+.+. ||++.+
T Consensus 76 ~D~v~~~~~l~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~ 144 (170)
T 3i9f_A 76 VDFILFANSFHDMDDKQHVISEVKRIL-KDDG--------RVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEK 144 (170)
T ss_dssp EEEEEEESCSTTCSCHHHHHHHHHHHE-EEEE--------EEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEE
T ss_pred eEEEEEccchhcccCHHHHHHHHHHhc-CCCC--------EEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEE
Confidence 999999999999999999999999999 9988 7777655432 23335556655 999999
Q ss_pred EcCC
Q 008457 524 KWPS 527 (564)
Q Consensus 524 ~~~~ 527 (564)
....
T Consensus 145 ~~~~ 148 (170)
T 3i9f_A 145 RFNP 148 (170)
T ss_dssp EECS
T ss_pred ccCC
Confidence 8754
No 208
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.33 E-value=1.1e-12 Score=126.84 Aligned_cols=142 Identities=11% Similarity=0.057 Sum_probs=99.4
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCC-------------------------C
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPF-------------------------L 428 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~-------------------------~ 428 (564)
..++.+|||||||+|.++.+++..+..+|+++|+|+.+++.+++++..+..... .
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 457889999999999777766666767899999999999999998876431100 0
Q ss_pred CceE-EEEeecCCCccchhhhhhcCCCccEEEEeceeeCC----CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 008457 429 AKLI-TKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP----EAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 429 ~~i~-~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~----~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
..+. +...|..+...+ .+...++||+|+++-++.+. .+...+++.+.++| ||+| .++++....
T Consensus 133 ~~i~~~~~~D~~~~~~~---~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~L-KPGG--------~li~~~~~~ 200 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPL---APAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLL-KPGG--------HLVTTVTLR 200 (263)
T ss_dssp HHEEEEEECCTTSSSTT---TTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTE-EEEE--------EEEEEEESS
T ss_pred hhhheEEeccccCCCCC---CccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHc-CCCc--------EEEEEEeec
Confidence 1122 444443321111 11234689999999888652 45578889999999 9988 777775322
Q ss_pred --------------cCChhHHHHHHHHcCCeEEEEcCC
Q 008457 504 --------------QVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 504 --------------~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
..+...+.+.+.++||.++++...
T Consensus 201 ~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 201 LPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp CCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 124557888999999999988744
No 209
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.32 E-value=7.1e-12 Score=119.72 Aligned_cols=158 Identities=12% Similarity=-0.004 Sum_probs=107.5
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
..++.+|||||||+|.++..++.. ...+|+++|.++.+++.+++|+..+++. ++.+...++.+... .+...
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~----~v~~~~~d~~~~~~----~~~~~ 149 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK----GARALWGRAEVLAR----EAGHR 149 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS----SEEEEECCHHHHTT----STTTT
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC----ceEEEECcHHHhhc----ccccC
Confidence 346789999999999777766655 4569999999999999999999998873 46666554422100 00123
Q ss_pred CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCC-hhHHHHHHHHcCCeEEEEcCCCCCC
Q 008457 453 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD-EPSMLSAATQCGFRLVDKWPSKNSA 531 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~-~~~~~~~~~~~g~~~~~~~~~~~~~ 531 (564)
++||+|++..+ ..++.+++.+.++| +|+| .+++........ ...+...+.+.|+++.++.....|.
T Consensus 150 ~~fD~I~s~a~----~~~~~ll~~~~~~L-kpgG--------~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~ 216 (249)
T 3g89_A 150 EAYARAVARAV----APLCVLSELLLPFL-EVGG--------AAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPL 216 (249)
T ss_dssp TCEEEEEEESS----CCHHHHHHHHGGGE-EEEE--------EEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTT
T ss_pred CCceEEEECCc----CCHHHHHHHHHHHc-CCCe--------EEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCC
Confidence 68999997643 56889999999999 9988 666544322221 2356777888999999987765555
Q ss_pred CCccccccccccCCCCcccCC
Q 008457 532 SPSESIISSWFSENGHEVYLP 552 (564)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~ 552 (564)
....+....+-....-+..||
T Consensus 217 ~~~~R~l~~~~k~~~t~~~yP 237 (249)
T 3g89_A 217 SGEARHLVVLEKTAPTPPAYP 237 (249)
T ss_dssp TCCEEEEEEEEECSCCCTTCS
T ss_pred CCCcEEEEEEEeCCCCCCCCC
Confidence 444443332222334444444
No 210
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.32 E-value=2.9e-12 Score=115.93 Aligned_cols=117 Identities=10% Similarity=0.085 Sum_probs=88.5
Q ss_pred HHHhhhcc-CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCC
Q 008457 65 KEWGRYFS-GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQ 141 (564)
Q Consensus 65 ~~~~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~ 141 (564)
..+.+.+. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++....+ .+++++++|+... + +
T Consensus 20 ~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~--~ 95 (177)
T 2esr_A 20 GAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA-I--D 95 (177)
T ss_dssp HHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH-H--H
T ss_pred HHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh-H--H
Confidence 33334443 357889999999999999999887 45699999999999999998875443 3688999988542 1 1
Q ss_pred CCCCceeEEEEcccccCCChhHHHHHHHHHH--hccCCCeEEEEEecCC
Q 008457 142 ISPSSIDIVTMVFVLSAVSPEKMSLVLQNIK--KVLKPTGYVLFRDYAI 188 (564)
Q Consensus 142 ~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~--r~LkpgG~lii~~~~~ 188 (564)
...++||+|+++..++. .....+++.+. ++|+|||.+++.....
T Consensus 96 ~~~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 96 CLTGRFDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HBCSCEEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred hhcCCCCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 13457999999876542 35566777776 9999999999976554
No 211
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.32 E-value=4.5e-12 Score=123.54 Aligned_cols=129 Identities=16% Similarity=0.066 Sum_probs=101.1
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHh-CCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCC
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPS 145 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~ 145 (564)
..+...++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|+++....+ .++.+..+|+... ++++
T Consensus 106 ~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~ 180 (277)
T 1o54_A 106 MMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-----FDEK 180 (277)
T ss_dssp HHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-----CSCC
T ss_pred HHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-----ccCC
Confidence 3344567899999999999999999998 678899999999999999998865433 4788988888643 3567
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHH
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLT 225 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 225 (564)
+||+|++. .+ ++..+++++.++|+|||.+++.+.... ...++.
T Consensus 181 ~~D~V~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~------------------------------~~~~~~ 223 (277)
T 1o54_A 181 DVDALFLD-----VP--DPWNYIDKCWEALKGGGRFATVCPTTN------------------------------QVQETL 223 (277)
T ss_dssp SEEEEEEC-----CS--CGGGTHHHHHHHEEEEEEEEEEESSHH------------------------------HHHHHH
T ss_pred ccCEEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeCCHH------------------------------HHHHHH
Confidence 89999983 32 445789999999999999999764310 235566
Q ss_pred HHHHhCCCcEEEee
Q 008457 226 SLFKENGFDVEELG 239 (564)
Q Consensus 226 ~~l~~aGf~~~~~~ 239 (564)
+.+++.||..++..
T Consensus 224 ~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 224 KKLQELPFIRIEVW 237 (277)
T ss_dssp HHHHHSSEEEEEEE
T ss_pred HHHHHCCCceeEEE
Confidence 77888999876643
No 212
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.32 E-value=1.3e-11 Score=112.46 Aligned_cols=141 Identities=13% Similarity=0.059 Sum_probs=92.3
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCc
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 442 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~ 442 (564)
.++..+... .+.++.+|||+|||+|.++..++.. +.+|+++|+|+.+++.+++|+..++. .++.+..-+.
T Consensus 10 ~~~~~~l~~-~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~----~~v~~~~~~~---- 79 (185)
T 3mti_A 10 HMSHDFLAE-VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI----ENTELILDGH---- 79 (185)
T ss_dssp HHHHHHHHT-TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC----CCEEEEESCG----
T ss_pred HHHHHHHHH-hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC----CcEEEEeCcH----
Confidence 344444432 2347889999999999888777766 77999999999999999999998876 3455554222
Q ss_pred cchhhhhhcCCCccEEEEeceeeC----------CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCC---h-h
Q 008457 443 HIEAIKEENNEGFEVILGTDVSYI----------PEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD---E-P 508 (564)
Q Consensus 443 ~~~~~~~~~~~~fD~Ii~~d~~y~----------~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~---~-~ 508 (564)
..+..+.+++||+|+++ ..|. ......+++.+.++| +|+| .++++....... + .
T Consensus 80 --~~l~~~~~~~fD~v~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~~~~~~~~~~~~ 147 (185)
T 3mti_A 80 --ENLDHYVREPIRAAIFN-LGYLPSADKSVITKPHTTLEAIEKILDRL-EVGG--------RLAIMIYYGHDGGDMEKD 147 (185)
T ss_dssp --GGGGGTCCSCEEEEEEE-EC-----------CHHHHHHHHHHHHHHE-EEEE--------EEEEEEC------CHHHH
T ss_pred --HHHHhhccCCcCEEEEe-CCCCCCcchhcccChhhHHHHHHHHHHhc-CCCc--------EEEEEEeCCCCCCHHHHH
Confidence 22222346789999765 2232 234457789999999 9988 776655432211 1 2
Q ss_pred ---HHHHHHHHcCCeEEEEc
Q 008457 509 ---SMLSAATQCGFRLVDKW 525 (564)
Q Consensus 509 ---~~~~~~~~~g~~~~~~~ 525 (564)
.++..+...+|.+.+..
T Consensus 148 ~~~~~~~~l~~~~~~~~~~~ 167 (185)
T 3mti_A 148 AVLEYVIGLDQRVFTAMLYQ 167 (185)
T ss_dssp HHHHHHHHSCTTTEEEEEEE
T ss_pred HHHHHHHhCCCceEEEEEeh
Confidence 33444445678887765
No 213
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.32 E-value=2.7e-12 Score=129.18 Aligned_cols=104 Identities=18% Similarity=0.186 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++....+ .+++++++|+... ++++++||+|+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~fD~Ii 138 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEV----ELPVEKVDIII 138 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC----CCSSSCEEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHc----cCCCCceEEEE
Confidence 57899999999999999999988 345999999995 9999998765433 4599999999754 34678999999
Q ss_pred EcccccCC-ChhHHHHHHHHHHhccCCCeEEEE
Q 008457 152 MVFVLSAV-SPEKMSLVLQNIKKVLKPTGYVLF 183 (564)
Q Consensus 152 ~~~vl~~~-~~~~~~~~l~~~~r~LkpgG~lii 183 (564)
+..+.+++ ....+..++.++.++|||||.++.
T Consensus 139 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 139 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 97765444 235778899999999999999874
No 214
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.32 E-value=4.5e-12 Score=125.97 Aligned_cols=113 Identities=16% Similarity=0.115 Sum_probs=90.8
Q ss_pred hHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccC
Q 008457 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSR 140 (564)
Q Consensus 63 ~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~ 140 (564)
+...+.+.+...++.+|||||||+|.++..+++..+ ..+|+|+|+|+.+++.|+++....+ .++++.++|+....
T Consensus 63 ~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~--- 139 (317)
T 1dl5_A 63 LMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV--- 139 (317)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC---
T ss_pred HHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc---
Confidence 334445556667899999999999999999998855 4679999999999999998865433 45899999986421
Q ss_pred CCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 141 QISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 141 ~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
.+.++||+|++..+++|++ +++.++|||||++++....
T Consensus 140 -~~~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 140 -PEFSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp -GGGCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCB
T ss_pred -ccCCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECC
Confidence 1357899999999999995 4678899999999998543
No 215
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.32 E-value=1.2e-11 Score=122.43 Aligned_cols=139 Identities=12% Similarity=0.081 Sum_probs=101.9
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCc
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSS 146 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~ 146 (564)
..+...++.+|||+|||+|..+..+++..+ +.+|+++|+|+.+++.++++....+ .++.++++|+..... ..++
T Consensus 112 ~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~----~~~~ 187 (315)
T 1ixk_A 112 VALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE----LNVE 187 (315)
T ss_dssp HHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG----GCCC
T ss_pred HHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc----cccc
Confidence 345567889999999999999999998853 5799999999999999998875444 378898888864321 3568
Q ss_pred eeEEEEcc------cccCCC-------hh-------HHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccc
Q 008457 147 IDIVTMVF------VLSAVS-------PE-------KMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISEN 206 (564)
Q Consensus 147 fD~V~~~~------vl~~~~-------~~-------~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~ 206 (564)
||+|++.. ++++.+ .+ ....+|+++.++|||||.+++++......
T Consensus 188 fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~--------------- 252 (315)
T 1ixk_A 188 FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE--------------- 252 (315)
T ss_dssp EEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG---------------
T ss_pred CCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH---------------
Confidence 99999842 233222 11 12589999999999999999976543221
Q ss_pred eeecCCCceeeccCHHHHHHHHHhCCCcEEEe
Q 008457 207 FYVRGDGTRAFYFSNDFLTSLFKENGFDVEEL 238 (564)
Q Consensus 207 ~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 238 (564)
-+.+.+..++++.||+.+.+
T Consensus 253 ------------Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 253 ------------ENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp ------------GTHHHHHHHHHHSSEEEECC
T ss_pred ------------HhHHHHHHHHhcCCCEEecC
Confidence 13556677888888877644
No 216
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.32 E-value=1.8e-12 Score=118.32 Aligned_cols=111 Identities=9% Similarity=0.032 Sum_probs=85.0
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++....+ .+++++++|+.......+..+++||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 46789999999999999988875 35799999999999999998865433 4689999998642211112367899999
Q ss_pred EcccccCCChhHHHHHHHHH--HhccCCCeEEEEEecCC
Q 008457 152 MVFVLSAVSPEKMSLVLQNI--KKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~--~r~LkpgG~lii~~~~~ 188 (564)
++..++.. .....++.+ .++|+|||.+++.....
T Consensus 122 ~~~~~~~~---~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 122 LDPPYAKQ---EIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp ECCCGGGC---CHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred ECCCCCch---hHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 98775533 345566666 89999999999976554
No 217
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.32 E-value=1.2e-11 Score=115.90 Aligned_cols=124 Identities=13% Similarity=0.113 Sum_probs=95.3
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++..++.. ..+|+++|+++.+++.+++++. .++.+...|..+. +.. ++|
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~~-------~~~-~~f 107 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLSF-------EVP-TSI 107 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSSC-------CCC-SCC
T ss_pred CCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhhc-------CCC-CCe
Confidence 6789999999999877777766 5689999999999999998854 2344444444332 122 699
Q ss_pred cEEEEeceeeCCCChHH--HHHHHHHHhhccCCCCCCCCCcEEEEEEeecc-----------------------------
Q 008457 456 EVILGTDVSYIPEAILP--LFATAKELTASSNKSLREDQQPAFILCHIFRQ----------------------------- 504 (564)
Q Consensus 456 D~Ii~~d~~y~~~~~~~--l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~----------------------------- 504 (564)
|+|++..++++...... +++.+.++| +|+| .++++.....
T Consensus 108 D~v~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (220)
T 3hnr_A 108 DTIVSTYAFHHLTDDEKNVAIAKYSQLL-NKGG--------KIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYY 178 (220)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHS-CTTC--------EEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCC
T ss_pred EEEEECcchhcCChHHHHHHHHHHHHhc-CCCC--------EEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhc
Confidence 99999999999887766 999999999 9988 7777753311
Q ss_pred CChhHHHHHHHHcCCeEEEEc
Q 008457 505 VDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 505 ~~~~~~~~~~~~~g~~~~~~~ 525 (564)
.+...+.+.++++||+++.+.
T Consensus 179 ~~~~~~~~~l~~aGf~v~~~~ 199 (220)
T 3hnr_A 179 TRIPVMQTIFENNGFHVTFTR 199 (220)
T ss_dssp CBHHHHHHHHHHTTEEEEEEE
T ss_pred CCHHHHHHHHHHCCCEEEEee
Confidence 123467788889999998875
No 218
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.32 E-value=1.2e-11 Score=117.74 Aligned_cols=127 Identities=13% Similarity=0.143 Sum_probs=95.0
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
+.++.+|||||||+|.++..++..+ .+|+++|+|+.+++.++++ +.+... +..+.+.+++++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~------------~~~~~~-----d~~~~~~~~~~~ 100 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEG-IESIGVDINEDMIKFCEGK------------FNVVKS-----DAIEYLKSLPDK 100 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHT-CCEEEECSCHHHHHHHHTT------------SEEECS-----CHHHHHHTSCTT
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCC-CcEEEEECCHHHHHHHHhh------------cceeec-----cHHHHhhhcCCC
Confidence 3467899999999998887777664 4799999999999998876 122211 111112245678
Q ss_pred CccEEEEeceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----------------cCChhHHHHHH
Q 008457 454 GFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----------------QVDEPSMLSAA 514 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-----------------~~~~~~~~~~~ 514 (564)
+||+|++..++.+.. ....+++.+.++| +|+| .+++..... ..+...+.+.+
T Consensus 101 ~fD~i~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 171 (240)
T 3dli_A 101 YLDGVMISHFVEHLDPERLFELLSLCYSKM-KYSS--------YIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFIL 171 (240)
T ss_dssp CBSEEEEESCGGGSCGGGHHHHHHHHHHHB-CTTC--------CEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHH
T ss_pred CeeEEEECCchhhCCcHHHHHHHHHHHHHc-CCCc--------EEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHH
Confidence 999999999999877 6699999999999 9988 666665432 12335677888
Q ss_pred HHcCCeEEEEcCC
Q 008457 515 TQCGFRLVDKWPS 527 (564)
Q Consensus 515 ~~~g~~~~~~~~~ 527 (564)
.++||+++++...
T Consensus 172 ~~aGf~~~~~~~~ 184 (240)
T 3dli_A 172 EYLGFRDVKIEFF 184 (240)
T ss_dssp HHHTCEEEEEEEE
T ss_pred HHCCCeEEEEEEe
Confidence 9999999988543
No 219
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.32 E-value=3.2e-12 Score=122.55 Aligned_cols=114 Identities=16% Similarity=0.199 Sum_probs=85.8
Q ss_pred CCCCeEEEEcCCccccHHHHHHh--CCCcEEEEEeCChHHHHHHHhccccc---CC--C---------------------
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAA--YPDVFVYACDFSPRAVNLVMTHKDFT---ET--R--------------------- 125 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~--~~~~~v~~iD~s~~~l~~a~~~~~~~---~~--~--------------------- 125 (564)
.++.+|||+|||+|.++..+++. .++.+|+|+|+|+.+++.|+++.... +. +
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 46789999999999999999987 66789999999999999999765432 11 1
Q ss_pred ----ee-------------EEEecCCcccccCCC-CCCceeEEEEcccccCCC-------hhHHHHHHHHHHhccCCCeE
Q 008457 126 ----VS-------------TFVCDLISDDLSRQI-SPSSIDIVTMVFVLSAVS-------PEKMSLVLQNIKKVLKPTGY 180 (564)
Q Consensus 126 ----i~-------------~~~~d~~~~~~~~~~-~~~~fD~V~~~~vl~~~~-------~~~~~~~l~~~~r~LkpgG~ 180 (564)
++ +.++|+........+ ..++||+|+|+..+.+.. .+....+++++.++|+|||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 56 889998642100000 234899999987655443 25677899999999999999
Q ss_pred EEEEecC
Q 008457 181 VLFRDYA 187 (564)
Q Consensus 181 lii~~~~ 187 (564)
+++....
T Consensus 210 l~~~~~~ 216 (250)
T 1o9g_A 210 IAVTDRS 216 (250)
T ss_dssp EEEEESS
T ss_pred EEEeCcc
Confidence 9985443
No 220
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.32 E-value=6.7e-12 Score=119.99 Aligned_cols=126 Identities=11% Similarity=0.100 Sum_probs=98.2
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||||||+|.++..++..+. +|+++|+++.+++.++++... ++.+...|..+. .++++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~--------~v~~~~~d~~~~--------~~~~~ 103 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD--------GITYIHSRFEDA--------QLPRR 103 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS--------CEEEEESCGGGC--------CCSSC
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC--------CeEEEEccHHHc--------CcCCc
Confidence 3677999999999977777766554 799999999999999987532 355554443221 24578
Q ss_pred ccEEEEeceeeCCCChHHHHHHHH-HHhhccCCCCCCCCCcEEEEEEeecc-----------------------------
Q 008457 455 FEVILGTDVSYIPEAILPLFATAK-ELTASSNKSLREDQQPAFILCHIFRQ----------------------------- 504 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~~l~~~~~-~ll~~~~g~~~~~~~~~~~~~~~~r~----------------------------- 504 (564)
||+|++..++++..+...+++.+. ++| +|+| .++++...+.
T Consensus 104 fD~v~~~~~l~~~~~~~~~l~~~~~~~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (250)
T 2p7i_A 104 YDNIVLTHVLEHIDDPVALLKRINDDWL-AEGG--------RLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHR 174 (250)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHHHTTE-EEEE--------EEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCC
T ss_pred ccEEEEhhHHHhhcCHHHHHHHHHHHhc-CCCC--------EEEEEcCChHHHHHHHHHHcCccccchhccccccccccc
Confidence 999999999999999999999999 999 9988 7777764321
Q ss_pred --CChhHHHHHHHHcCCeEEEEcC
Q 008457 505 --VDEPSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 505 --~~~~~~~~~~~~~g~~~~~~~~ 526 (564)
.+...+.+.+.++||+++++..
T Consensus 175 ~~~~~~~~~~~l~~~Gf~~~~~~~ 198 (250)
T 2p7i_A 175 CTYALDTLERDASRAGLQVTYRSG 198 (250)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred ccCCHHHHHHHHHHCCCeEEEEee
Confidence 2345678888999999998853
No 221
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.32 E-value=7.4e-12 Score=116.22 Aligned_cols=125 Identities=14% Similarity=0.051 Sum_probs=96.5
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC-
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE- 453 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~- 453 (564)
++.+|||+|||+|.++..++..+ ..+|+++|+++.+++.+++|+..|++. +++.+..-|+.+. ++.+
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~---~~i~~~~~d~l~~--------l~~~~ 83 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK---EKIQVRLANGLAA--------FEETD 83 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT---TTEEEEECSGGGG--------CCGGG
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---ceEEEEECchhhh--------cccCc
Confidence 67799999999998888888776 458999999999999999999999985 5688877665321 2223
Q ss_pred CccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 454 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
+||+|+.+.. ....+..++......| +++| .++++.. .....+.+.+.+.||.+.+-.
T Consensus 84 ~~D~IviaG~--Gg~~i~~Il~~~~~~L-~~~~--------~lVlq~~---~~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 84 QVSVITIAGM--GGRLIARILEEGLGKL-ANVE--------RLILQPN---NREDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp CCCEEEEEEE--CHHHHHHHHHHTGGGC-TTCC--------EEEEEES---SCHHHHHHHHHHTTEEEEEEE
T ss_pred CCCEEEEcCC--ChHHHHHHHHHHHHHh-CCCC--------EEEEECC---CCHHHHHHHHHHCCCEEEEEE
Confidence 6999886654 2234677788888888 7766 7777655 345678889999999988753
No 222
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.32 E-value=1.8e-11 Score=118.64 Aligned_cols=101 Identities=22% Similarity=0.382 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||||||+|.++..+++..++.+|+|+|+|+.+++.|+++. .++.+...|+... ++++++||+|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~----~~~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRL----PFSDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSC----SBCTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhC----CCCCCceeEEEEe
Confidence 5788999999999999999999877889999999999999998875 3578888888543 4577899999997
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCch
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDL 191 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~ 191 (564)
.+.. +++++.++|||||.+++.++.....
T Consensus 156 ~~~~---------~l~~~~~~L~pgG~l~~~~~~~~~~ 184 (269)
T 1p91_A 156 YAPC---------KAEELARVVKPGGWVITATPGPRHL 184 (269)
T ss_dssp SCCC---------CHHHHHHHEEEEEEEEEEEECTTTT
T ss_pred CChh---------hHHHHHHhcCCCcEEEEEEcCHHHH
Confidence 6532 4789999999999999998776543
No 223
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.31 E-value=4.2e-11 Score=110.60 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=78.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCC--CcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccc-------------
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYP--DVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDL------------- 138 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~--~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~------------- 138 (564)
.++.+|||+|||+|.++..+++..+ +.+|+|+|+|+.+ ...++.+.++|+.....
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CCCCceEEEccccchhhhhhcccccccccc
Confidence 5678999999999999999999876 6899999999831 12468888998865420
Q ss_pred --------cCCCCCCceeEEEEcccccCCCh--hH-------HHHHHHHHHhccCCCeEEEEEecC
Q 008457 139 --------SRQISPSSIDIVTMVFVLSAVSP--EK-------MSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 139 --------~~~~~~~~fD~V~~~~vl~~~~~--~~-------~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
...+++++||+|++..++++... .+ ...+++++.++|||||.+++..+.
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 00035679999999888776421 11 124889999999999999986543
No 224
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.31 E-value=4.3e-12 Score=127.67 Aligned_cols=113 Identities=22% Similarity=0.220 Sum_probs=90.7
Q ss_pred HHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCC
Q 008457 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 65 ~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~ 142 (564)
..+.+.+...++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++....+ .+++++.+|+....+
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~---- 113 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL---- 113 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC----
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC----
Confidence 34444454468899999999999999998886 346999999996 8888888765433 579999999865422
Q ss_pred CCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEE
Q 008457 143 SPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
+ ++||+|++..+++|+..+.....+.++.++|||||.+++.
T Consensus 114 ~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 114 P-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp S-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred C-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 3 6899999999888887667778888999999999999864
No 225
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.31 E-value=3.6e-12 Score=127.87 Aligned_cols=106 Identities=17% Similarity=0.136 Sum_probs=86.8
Q ss_pred HhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhh
Q 008457 368 LARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAI 447 (564)
Q Consensus 368 l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~ 447 (564)
+.++...++|++|||||||+|.++.+++..++++|+++|.++ +++.+++++..|++. ++|.+..-+..+.
T Consensus 75 i~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~---~~i~~i~~~~~~~------ 144 (376)
T 4hc4_A 75 ILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLE---DRVHVLPGPVETV------ 144 (376)
T ss_dssp HHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCT---TTEEEEESCTTTC------
T ss_pred HHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCC---ceEEEEeeeeeee------
Confidence 445566679999999999999888888888889999999986 889999999999985 6787776654432
Q ss_pred hhhcCCCccEEEE---eceeeCCCChHHHHHHHHHHhhccCC
Q 008457 448 KEENNEGFEVILG---TDVSYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 448 ~~~~~~~fD~Ii~---~d~~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
. .+++||+||+ ..++.+...++.++....++| +|+|
T Consensus 145 -~-lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~L-kp~G 183 (376)
T 4hc4_A 145 -E-LPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWL-KEGG 183 (376)
T ss_dssp -C-CSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHE-EEEE
T ss_pred -c-CCccccEEEeecccccccccchhhhHHHHHHhhC-CCCc
Confidence 1 2368999996 455677889999999999999 9987
No 226
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.31 E-value=3.3e-11 Score=117.20 Aligned_cols=138 Identities=14% Similarity=0.133 Sum_probs=104.6
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhcC-C-CEEEEEcCChh------HHHHHHHHHHhcCCCCCCCceEEEEee-cCCCcc
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAGS-A-DLVVATDGDSI------ALDLLAQNVTANLKPPFLAKLITKRLE-WGNRDH 443 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~~-~-~~v~~tD~~~~------~l~~~~~n~~~n~~~~~~~~i~~~~l~-w~~~~~ 443 (564)
.+.++.+|||||||+|.++..++... . .+|+++|+++. +++.+++++..++.. .++.+...| +....
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~~~- 115 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG---DRLTVHFNTNLSDDL- 115 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG---GGEEEECSCCTTTCC-
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC---CceEEEECChhhhcc-
Confidence 44578899999999998888777763 3 69999999987 999999999877653 457766655 22111
Q ss_pred chhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------------
Q 008457 444 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-------------------- 503 (564)
Q Consensus 444 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-------------------- 503 (564)
.++++++||+|++..++++..+...+++.++.++ +++| .+++.....
T Consensus 116 ----~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~-~~gG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (275)
T 3bkx_A 116 ----GPIADQHFDRVVLAHSLWYFASANALALLFKNMA-AVCD--------HVDVAEWSMQPTALDQIGHLQAAMIQGLL 182 (275)
T ss_dssp ----GGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHT-TTCS--------EEEEEEECSSCSSGGGHHHHHHHHHHHHH
T ss_pred ----CCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHh-CCCC--------EEEEEEecCCCCchhhhhHHHHHHHHHHH
Confidence 1345679999999999999988899888888888 8777 676653221
Q ss_pred -------------cCChhHHHHHHHHcCCeEEEEcCC
Q 008457 504 -------------QVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 504 -------------~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
..+...+.+.++++||+++++...
T Consensus 183 ~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 183 YAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred hhccccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 122346778888999999998766
No 227
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.30 E-value=1.4e-11 Score=111.29 Aligned_cols=129 Identities=12% Similarity=0.051 Sum_probs=94.6
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 451 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~ 451 (564)
...++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++|+..++.. .++ ...-+.. +.+ +..
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~~-~~~~d~~-----~~~-~~~ 91 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVS---DRI-AVQQGAP-----RAF-DDV 91 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCT---TSE-EEECCTT-----GGG-GGC
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCC---CCE-EEecchH-----hhh-hcc
Confidence 34577899999999998887777764 569999999999999999999987763 245 4433322 111 112
Q ss_pred CCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 452 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 452 ~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
.++||+|+++.++++ ..+++.+.++| +|+| .+++...... ....+.+.+.+.|+++.++.
T Consensus 92 ~~~~D~i~~~~~~~~----~~~l~~~~~~L-~~gG--------~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA----PGVFAAAWKRL-PVGG--------RLVANAVTVE-SEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp CSCCSEEEECC-TTC----TTHHHHHHHTC-CTTC--------EEEEEECSHH-HHHHHHHHHHHHCCEEEEEE
T ss_pred CCCCCEEEECCcccH----HHHHHHHHHhc-CCCC--------EEEEEeeccc-cHHHHHHHHHHcCCeeEEEE
Confidence 268999998877765 78999999999 9988 7777654432 23356777888898888764
No 228
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.30 E-value=9.7e-12 Score=120.18 Aligned_cols=142 Identities=11% Similarity=0.029 Sum_probs=102.1
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCC--------------C-----------C
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPP--------------F-----------L 428 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~--------------~-----------~ 428 (564)
..++.+|||||||+|.++..++..+..+|+++|+++.+++.+++++..+.... . .
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 35788999999999977776666655689999999999999999876543100 0 0
Q ss_pred Cce-EEEEeecCCCccchhhhhhcCCCccEEEEeceee----CCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee-
Q 008457 429 AKL-ITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSY----IPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF- 502 (564)
Q Consensus 429 ~~i-~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y----~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~- 502 (564)
.++ .+...|..+.... .+...++||+|+++.++. +......+++.+.++| +|+| .++++...
T Consensus 134 ~~v~~~~~~d~~~~~~~---~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~L-kpgG--------~li~~~~~~ 201 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPL---GGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLL-KPGG--------FLVMVDALK 201 (265)
T ss_dssp HHEEEEEECCTTSSSTT---TTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTE-EEEE--------EEEEEEESS
T ss_pred hhheeEEEeeeccCCCC---CccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhC-CCCc--------EEEEEecCC
Confidence 115 6666665543211 112237899999999988 6667889999999999 9988 77765421
Q ss_pred -------------ccCChhHHHHHHHHcCCeEEEEcCC
Q 008457 503 -------------RQVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 503 -------------r~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
+..+...+.+.+.++||+++++...
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 239 (265)
T 2i62_A 202 SSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVI 239 (265)
T ss_dssp CCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred CceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEe
Confidence 2234457888899999999988643
No 229
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.30 E-value=2e-11 Score=117.81 Aligned_cols=117 Identities=18% Similarity=0.145 Sum_probs=89.9
Q ss_pred HHHHHHhc-CCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCC
Q 008457 363 LMAAVLAR-NPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNR 441 (564)
Q Consensus 363 ~l~~~l~~-~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~ 441 (564)
.+.+.+.. ...+.++.+|||+|||+|.++..++.. ..+|+++|+++.+++.+++++ .+. ..++.+...|+.+.
T Consensus 25 ~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-~~~----~~~~~~~~~d~~~~ 98 (263)
T 2yqz_A 25 QIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI-AGV----DRKVQVVQADARAI 98 (263)
T ss_dssp HHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT-TTS----CTTEEEEESCTTSC
T ss_pred HHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh-hcc----CCceEEEEcccccC
Confidence 34455532 233457889999999999877777665 568999999999999999987 222 14577777766432
Q ss_pred ccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 008457 442 DHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 501 (564)
Q Consensus 442 ~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~ 501 (564)
++++++||+|+++.++++..+...+++.+.++| +|+| .+++...
T Consensus 99 -------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~ 142 (263)
T 2yqz_A 99 -------PLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVL-KPGG--------ALLEGWD 142 (263)
T ss_dssp -------CSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHE-EEEE--------EEEEEEE
T ss_pred -------CCCCCCeeEEEECCchhhcCCHHHHHHHHHHHC-CCCc--------EEEEEec
Confidence 234578999999999999889999999999999 9988 7766633
No 230
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.30 E-value=1.9e-11 Score=115.22 Aligned_cols=117 Identities=15% Similarity=0.222 Sum_probs=89.5
Q ss_pred HHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCC
Q 008457 361 AHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGN 440 (564)
Q Consensus 361 ~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~ 440 (564)
...+.+.+..... ++.+|||||||+|.++..++..+. +|+++|+++.+++.+++|...++ .++.+...|..+
T Consensus 25 ~~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~ 96 (227)
T 1ve3_A 25 IETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE-----SNVEFIVGDARK 96 (227)
T ss_dssp HHHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-----CCCEEEECCTTS
T ss_pred HHHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC-----CCceEEECchhc
Confidence 3445566655433 478999999999988877776655 99999999999999999998765 346666666543
Q ss_pred CccchhhhhhcCCCccEEEEece--eeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 008457 441 RDHIEAIKEENNEGFEVILGTDV--SYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 501 (564)
Q Consensus 441 ~~~~~~~~~~~~~~fD~Ii~~d~--~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~ 501 (564)
. ++++++||+|+++++ +++......+++.+.++| +|+| .+++...
T Consensus 97 ~-------~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L-~~gG--------~l~~~~~ 143 (227)
T 1ve3_A 97 L-------SFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVL-KPSG--------KFIMYFT 143 (227)
T ss_dssp C-------CSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHE-EEEE--------EEEEEEE
T ss_pred C-------CCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHc-CCCc--------EEEEEec
Confidence 2 234568999999999 666667889999999999 9988 6666544
No 231
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.30 E-value=3.8e-11 Score=112.15 Aligned_cols=131 Identities=15% Similarity=0.094 Sum_probs=96.9
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
++.+|||||||+|.++..++... ..+|+++|+++.+++.+++|+..+++ .++.+...|+.+. .. .+++++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~----~~v~~~~~d~~~~---~~--~~~~~~ 111 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV----PNIKLLWVDGSDL---TD--YFEDGE 111 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC----SSEEEEECCSSCG---GG--TSCTTC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC----CCEEEEeCCHHHH---Hh--hcCCCC
Confidence 56799999999998888777765 46999999999999999999998876 4577777666532 10 134568
Q ss_pred ccEEEEeceeeCCC--------ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 455 FEVILGTDVSYIPE--------AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 455 fD~Ii~~d~~y~~~--------~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
||+|+++-..-... ....+++.+.++| +|+| .+++........ ....+.+.+.||.+..+.
T Consensus 112 ~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~-~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 112 IDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRIL-PENG--------EIHFKTDNRGLF-EYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp CSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHS-CTTC--------EEEEEESCHHHH-HHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECCCCccccchhhhccCCHHHHHHHHHHc-CCCc--------EEEEEeCCHHHH-HHHHHHHHHCCCeeeecc
Confidence 99999774321111 3478999999999 9988 777765433222 345677788899998876
No 232
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.30 E-value=1e-11 Score=122.22 Aligned_cols=108 Identities=17% Similarity=0.129 Sum_probs=85.3
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhh-cCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE-NNE 453 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~-~~~ 453 (564)
.++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++..++.. .++.+...|..+. ++ .++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-------~~~~~~ 132 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRR---FKVFFRAQDSYGR-------HMDLGK 132 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCS---SEEEEEESCTTTS-------CCCCSS
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCC---ccEEEEECCcccc-------ccCCCC
Confidence 367899999999998777777666669999999999999999998876543 4567776666543 12 356
Q ss_pred CccEEEEeceeeC----CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 008457 454 GFEVILGTDVSYI----PEAILPLFATAKELTASSNKSLREDQQPAFILCHI 501 (564)
Q Consensus 454 ~fD~Ii~~d~~y~----~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~ 501 (564)
+||+|++..++++ ......+++.+.++| +|+| .++++..
T Consensus 133 ~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~ 175 (298)
T 1ri5_A 133 EFDVISSQFSFHYAFSTSESLDIAQRNIARHL-RPGG--------YFIMTVP 175 (298)
T ss_dssp CEEEEEEESCGGGGGSSHHHHHHHHHHHHHTE-EEEE--------EEEEEEE
T ss_pred CcCEEEECchhhhhcCCHHHHHHHHHHHHHhc-CCCC--------EEEEEEC
Confidence 8999999998854 456788999999999 9988 6666643
No 233
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.30 E-value=3.7e-11 Score=110.09 Aligned_cols=126 Identities=20% Similarity=0.263 Sum_probs=97.6
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++..++.. ..+|+++|+++.+++.+++|.. ++.+...|..+. ++++++|
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~---------~~~~~~~d~~~~-------~~~~~~~ 108 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDFP---------EARWVVGDLSVD-------QISETDF 108 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTS-------CCCCCCE
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhCC---------CCcEEEcccccC-------CCCCCce
Confidence 6789999999999877777766 5699999999999999998752 245555555432 2345689
Q ss_pred cEEEEe-ceeeCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc-CChhHHHHHHHHcCCeEEEEcCC
Q 008457 456 EVILGT-DVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-VDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 456 D~Ii~~-d~~y~~--~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
|+|+++ +++.+. .....+++.+.++| +|+| .+++...... .+...+.+.+.+.||++.++...
T Consensus 109 D~i~~~~~~~~~~~~~~~~~~l~~~~~~l-~~~G--------~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 109 DLIVSAGNVMGFLAEDGREPALANIHRAL-GADG--------RAVIGFGAGRGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred eEEEECCcHHhhcChHHHHHHHHHHHHHh-CCCC--------EEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecc
Confidence 999998 666654 45688999999999 9987 7777766544 45567889999999999998743
No 234
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.30 E-value=2.2e-11 Score=112.10 Aligned_cols=127 Identities=21% Similarity=0.210 Sum_probs=95.7
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||+|||+|.++..++.. +.+|+++|+++.+++.+++++..++. .++.+...|+.+. +. +++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~d~~~~-------~~-~~~ 97 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENL----DNLHTRVVDLNNL-------TF-DRQ 97 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC----TTEEEEECCGGGC-------CC-CCC
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCC----CCcEEEEcchhhC-------CC-CCC
Confidence 46779999999999887777766 56999999999999999999988765 3466666655432 12 568
Q ss_pred ccEEEEeceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec------------cCChhHHHHHHHHcCCe
Q 008457 455 FEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------QVDEPSMLSAATQCGFR 520 (564)
Q Consensus 455 fD~Ii~~d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r------------~~~~~~~~~~~~~~g~~ 520 (564)
||+|+++.++++.. ....+++.+.++| +|+| .+++..... ..+...+.+.+.+ |+
T Consensus 98 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L-~~gG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~ 166 (199)
T 2xvm_A 98 YDFILSTVVLMFLEAKTIPGLIANMQRCT-KPGG--------YNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WE 166 (199)
T ss_dssp EEEEEEESCGGGSCGGGHHHHHHHHHHTE-EEEE--------EEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SE
T ss_pred ceEEEEcchhhhCCHHHHHHHHHHHHHhc-CCCe--------EEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--Ce
Confidence 99999999988765 8899999999999 9987 655544321 1233455555543 88
Q ss_pred EEEEc
Q 008457 521 LVDKW 525 (564)
Q Consensus 521 ~~~~~ 525 (564)
+++..
T Consensus 167 ~~~~~ 171 (199)
T 2xvm_A 167 RVKYN 171 (199)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88775
No 235
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.30 E-value=1e-11 Score=122.01 Aligned_cols=105 Identities=15% Similarity=0.237 Sum_probs=79.3
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||||||+|.++..++..+ .+|+++|+|+.+++.+++|+..........++.+...++.... ..+ +.+++|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~--~~~~~f 131 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEG-FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD--KDV--PAGDGF 131 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH--HHS--CCTTCE
T ss_pred CCCEEEEecCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc--ccc--ccCCCe
Confidence 67899999999998877777664 4999999999999999998765443211233455544443210 000 356799
Q ss_pred cEEEEe-ceeeCCCC-------hHHHHHHHHHHhhccCC
Q 008457 456 EVILGT-DVSYIPEA-------ILPLFATAKELTASSNK 486 (564)
Q Consensus 456 D~Ii~~-d~~y~~~~-------~~~l~~~~~~ll~~~~g 486 (564)
|+|++. +++.+... ...+++.+.++| +|+|
T Consensus 132 D~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~L-kpgG 169 (293)
T 3thr_A 132 DAVICLGNSFAHLPDSKGDQSEHRLALKNIASMV-RPGG 169 (293)
T ss_dssp EEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTE-EEEE
T ss_pred EEEEEcChHHhhcCccccCHHHHHHHHHHHHHHc-CCCe
Confidence 999998 89988888 999999999999 9988
No 236
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.30 E-value=2.7e-12 Score=121.70 Aligned_cols=103 Identities=10% Similarity=0.061 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCccccHHHHHHh----CCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCC-CCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAA----YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQI-SPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~----~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~-~~~~fD 148 (564)
.++.+|||||||+|..+..|++. .++.+|+|+|+|+.+++.|+. ...+++++++|+..... .+. ...+||
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~~~~v~~~~gD~~~~~~-l~~~~~~~fD 154 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----DMENITLHQGDCSDLTT-FEHLREMAHP 154 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----GCTTEEEEECCSSCSGG-GGGGSSSCSS
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----cCCceEEEECcchhHHH-HHhhccCCCC
Confidence 45689999999999999999987 678999999999999988872 23679999999875311 011 234799
Q ss_pred EEEEcccccCCChhHHHHHHHHHHh-ccCCCeEEEEEec
Q 008457 149 IVTMVFVLSAVSPEKMSLVLQNIKK-VLKPTGYVLFRDY 186 (564)
Q Consensus 149 ~V~~~~vl~~~~~~~~~~~l~~~~r-~LkpgG~lii~~~ 186 (564)
+|++... |. +...++.++.+ +|||||++++.+.
T Consensus 155 ~I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 155 LIFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 9998665 43 56779999997 9999999999654
No 237
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.30 E-value=7.5e-12 Score=119.19 Aligned_cols=135 Identities=13% Similarity=0.030 Sum_probs=96.1
Q ss_pred CCCCeEEEeCCcccHHHHHHHh-cCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAA-GSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~-~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
.++.+|||+|||+|.++..++. ....+|+++|+++.+++.+++|+..++.. ++.+...|..+... .....+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~v~~~~~d~~~~~~----~~~~~~ 140 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE----NTTFCHDRAETFGQ----RKDVRE 140 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS----SEEEEESCHHHHTT----CTTTTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----CEEEEeccHHHhcc----cccccC
Confidence 3678999999999977766664 34569999999999999999999988762 46666554321100 000146
Q ss_pred CccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCC-hhHHHHHHHHcCCeEEEEcCCCCC
Q 008457 454 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD-EPSMLSAATQCGFRLVDKWPSKNS 530 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~-~~~~~~~~~~~g~~~~~~~~~~~~ 530 (564)
+||+|++.. ......+++.+.++| +|+| .+++........ ...+.+.+.+.||.+.++.....|
T Consensus 141 ~fD~V~~~~----~~~~~~~l~~~~~~L-kpgG--------~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 205 (240)
T 1xdz_A 141 SYDIVTARA----VARLSVLSELCLPLV-KKNG--------LFVALKAASAEEELNAGKKAITTLGGELENIHSFKLP 205 (240)
T ss_dssp CEEEEEEEC----CSCHHHHHHHHGGGE-EEEE--------EEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECT
T ss_pred CccEEEEec----cCCHHHHHHHHHHhc-CCCC--------EEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecC
Confidence 899999766 367899999999999 9988 776653332211 235667788899999887644333
No 238
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.29 E-value=8e-12 Score=114.24 Aligned_cols=136 Identities=12% Similarity=0.146 Sum_probs=99.3
Q ss_pred HHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCcc
Q 008457 364 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 443 (564)
Q Consensus 364 l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~ 443 (564)
+..++.......++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++|+..++.. .++.+...|+.+
T Consensus 21 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~--- 93 (192)
T 1l3i_A 21 VRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLG---DNVTLMEGDAPE--- 93 (192)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCC---TTEEEEESCHHH---
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCC---cceEEEecCHHH---
Confidence 34444443345578899999999998777777766 89999999999999999999988753 356666554422
Q ss_pred chhhhhhcC-CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEE
Q 008457 444 IEAIKEENN-EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLV 522 (564)
Q Consensus 444 ~~~~~~~~~-~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~ 522 (564)
.++. ++||+|++..++ .....+++.+.++| +|+| .+++...... ....+.+.+.+.||.+.
T Consensus 94 -----~~~~~~~~D~v~~~~~~---~~~~~~l~~~~~~l-~~gG--------~l~~~~~~~~-~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 94 -----ALCKIPDIDIAVVGGSG---GELQEILRIIKDKL-KPGG--------RIIVTAILLE-TKFEAMECLRDLGFDVN 155 (192)
T ss_dssp -----HHTTSCCEEEEEESCCT---TCHHHHHHHHHHTE-EEEE--------EEEEEECBHH-HHHHHHHHHHHTTCCCE
T ss_pred -----hcccCCCCCEEEECCch---HHHHHHHHHHHHhc-CCCc--------EEEEEecCcc-hHHHHHHHHHHCCCceE
Confidence 1222 489999987654 45799999999999 9987 7776654432 23467788888999665
Q ss_pred EE
Q 008457 523 DK 524 (564)
Q Consensus 523 ~~ 524 (564)
.+
T Consensus 156 ~~ 157 (192)
T 1l3i_A 156 IT 157 (192)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 239
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.29 E-value=1.1e-12 Score=126.05 Aligned_cols=156 Identities=12% Similarity=0.025 Sum_probs=98.3
Q ss_pred CCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCC---CCceeE
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQIS---PSSIDI 149 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~---~~~fD~ 149 (564)
++.+|||+|||+|.++..++...++.+|+|+|+|+.|++.|+++....+ .+++++++|+... +..+++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL-LMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS-STTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhh-hhhhhhcccCCcccE
Confidence 5779999999999999999887667899999999999999998865433 3589999997542 111233 368999
Q ss_pred EEEcccccCCCh-------------hHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCcee
Q 008457 150 VTMVFVLSAVSP-------------EKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRA 216 (564)
Q Consensus 150 V~~~~vl~~~~~-------------~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (564)
|+++-.+++... +....++.+++++|||||.+.+...... . ....... ....+. ...
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~----~-~~~~l~~-~g~~~~----~~~ 213 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIH----D-SLQLKKR-LRWYSC----MLG 213 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHH----H-HHHHGGG-BSCEEE----EES
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHH----H-HHhcccc-eEEEEE----CCC
Confidence 999866554320 1122467889999999998876532110 0 0000000 001110 001
Q ss_pred eccCHHHHHHHHHhCCCcEEEeeee
Q 008457 217 FYFSNDFLTSLFKENGFDVEELGLC 241 (564)
Q Consensus 217 ~~~~~~~l~~~l~~aGf~~~~~~~~ 241 (564)
...+.+++.++++++||..+.....
T Consensus 214 ~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 214 KKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp STTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred ChhHHHHHHHHHHHcCCCceEEEEE
Confidence 1224578999999999988765443
No 240
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.29 E-value=2e-11 Score=124.55 Aligned_cols=140 Identities=16% Similarity=0.211 Sum_probs=105.9
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhc--CCCEEEEEcCChhHHHHHHHHHHhc-----C-CCCCCCceEEEEeecCCCccch
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTAN-----L-KPPFLAKLITKRLEWGNRDHIE 445 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~--~~~~v~~tD~~~~~l~~~~~n~~~n-----~-~~~~~~~i~~~~l~w~~~~~~~ 445 (564)
..++.+|||||||+|.++..++.. ...+|+++|+++.+++.+++|+..+ + .. ..++.+...|+.+.....
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~--~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPS--RSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTT--CCCEEEEESCTTCGGGCB
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccC--CCceEEEEccHHHhhhcc
Confidence 457889999999999887777765 3459999999999999999998765 2 21 246777777765421110
Q ss_pred hhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc---------------------
Q 008457 446 AIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------------------- 504 (564)
Q Consensus 446 ~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~--------------------- 504 (564)
. .++++++||+|+++.++++..+...+++.+.++| +|+| .++++.....
T Consensus 159 ~-~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (383)
T 4fsd_A 159 P-EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVL-RDGG--------ELYFSDVYADRRLSEAAQQDPILYGECLGGA 228 (383)
T ss_dssp S-CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE-EEEE--------EEEEEEEEESSCCCHHHHHCHHHHHTTCTTC
T ss_pred c-CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHc-CCCC--------EEEEEEeccccccCHhHhhhHHHhhcccccC
Confidence 0 0345679999999999999999999999999999 9988 7777654322
Q ss_pred CChhHHHHHHHHcCCeEEEEc
Q 008457 505 VDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 505 ~~~~~~~~~~~~~g~~~~~~~ 525 (564)
.....+.+.+.++||.+.++.
T Consensus 229 ~~~~~~~~ll~~aGF~~v~~~ 249 (383)
T 4fsd_A 229 LYLEDFRRLVAEAGFRDVRLV 249 (383)
T ss_dssp CBHHHHHHHHHHTTCCCEEEE
T ss_pred CCHHHHHHHHHHCCCceEEEE
Confidence 223567888899999877654
No 241
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.29 E-value=1.3e-11 Score=114.68 Aligned_cols=125 Identities=12% Similarity=0.088 Sum_probs=96.5
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC-C
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN-E 453 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~-~ 453 (564)
++.+|||+|||+|.++..++..+ ..+|+++|+++.+++.+++|+..|++. +++.+..-|+.+. +.+ .
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~---~~I~~~~gD~l~~--------~~~~~ 89 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLT---SKIDVRLANGLSA--------FEEAD 89 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCT---TTEEEEECSGGGG--------CCGGG
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEECchhhc--------ccccc
Confidence 67899999999999988888876 458999999999999999999999985 5788877665432 122 3
Q ss_pred CccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 454 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
+||+|+.+-+.- ..+..++......| +++| .++++.. ...+.+.+++.+.||.+.+-.
T Consensus 90 ~~D~IviaGmGg--~lI~~IL~~~~~~l-~~~~--------~lIlqp~---~~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 90 NIDTITICGMGG--RLIADILNNDIDKL-QHVK--------TLVLQPN---NREDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp CCCEEEEEEECH--HHHHHHHHHTGGGG-TTCC--------EEEEEES---SCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCEEEEeCCch--HHHHHHHHHHHHHh-CcCC--------EEEEECC---CChHHHHHHHHHCCCEEEEEE
Confidence 799988654433 44666777777778 7665 7888763 346678899999999988754
No 242
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.29 E-value=7.4e-12 Score=122.89 Aligned_cols=143 Identities=19% Similarity=0.253 Sum_probs=101.5
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHHHHHHHhcCCC---------------------------
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKP--------------------------- 425 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~~~n~~~n~~~--------------------------- 425 (564)
.+++++|||||||+|.++..++.. .+.+|+++|+++.+++.+++|+..+...
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 457899999999999888877776 3579999999999999999987654421
Q ss_pred ---------------------------CCCCceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeC------CCChHH
Q 008457 426 ---------------------------PFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI------PEAILP 472 (564)
Q Consensus 426 ---------------------------~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~------~~~~~~ 472 (564)
....++.+...||.... ..+.+...++||+|++..++.+ ......
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~--~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDR--DDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSS--HHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCc--cccccccCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 00146888888886542 1222345679999999998733 337889
Q ss_pred HHHHHHHHhhccCCCCCCCCCcEEEEEEee-------c-------------cCChhHHHHHHHH--cCCeEEEEcCC
Q 008457 473 LFATAKELTASSNKSLREDQQPAFILCHIF-------R-------------QVDEPSMLSAATQ--CGFRLVDKWPS 527 (564)
Q Consensus 473 l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~-------r-------------~~~~~~~~~~~~~--~g~~~~~~~~~ 527 (564)
+++.+.++| +|+| .+++.... + ......|.+.+.+ .||+..++...
T Consensus 202 ~l~~~~~~L-kpGG--------~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 202 MFRRIYRHL-RPGG--------ILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHHHHHE-EEEE--------EEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHHHHh-CCCc--------EEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 999999999 9988 77775321 1 1123467778877 89999888755
No 243
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.29 E-value=6.9e-12 Score=127.44 Aligned_cols=109 Identities=17% Similarity=0.154 Sum_probs=87.5
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCc
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSS 146 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~ 146 (564)
+.....++.+|||||||+|.++..+++.+ ..+|+|+|+| .|++.|+++....+ .+++++++|+.... ++ ++
T Consensus 57 ~~~~~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~-~~ 129 (376)
T 3r0q_C 57 QNKHHFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS----LP-EK 129 (376)
T ss_dssp TTTTTTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC----CS-SC
T ss_pred hccccCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC----cC-Cc
Confidence 33444788999999999999999999883 3399999999 99999998765433 55999999996543 23 78
Q ss_pred eeEEEEcccccCCC-hhHHHHHHHHHHhccCCCeEEEEE
Q 008457 147 IDIVTMVFVLSAVS-PEKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 147 fD~V~~~~vl~~~~-~~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
||+|++..+.+++. ...+..+++++.++|||||.+++.
T Consensus 130 ~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 130 VDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred ceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 99999977666553 245788999999999999999874
No 244
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.29 E-value=5e-11 Score=110.67 Aligned_cols=128 Identities=17% Similarity=0.161 Sum_probs=96.3
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
..++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|+++....+.+++++++|+.. + + ++||+|++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~--~----~-~~~D~v~~ 118 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE--F----N-SRVDIVIM 118 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG--C----C-CCCSEEEE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH--c----C-CCCCEEEE
Confidence 3578899999999999999998873 3489999999999999999876554578999999864 2 2 48999999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENG 232 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 232 (564)
+..+++........+++++.+++ ||.+++. ... . -+.+.+.+.+++.|
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~-~~~-~----------------------------~~~~~~~~~l~~~g 166 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS--DVVYSIH-LAK-P----------------------------EVRRFIEKFSWEHG 166 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE-ECC-H----------------------------HHHHHHHHHHHHTT
T ss_pred cCCCccccCCchHHHHHHHHHhc--CcEEEEE-eCC-c----------------------------CCHHHHHHHHHHCC
Confidence 98887775444567899999988 5544332 111 0 03455677889999
Q ss_pred CcEEEeee
Q 008457 233 FDVEELGL 240 (564)
Q Consensus 233 f~~~~~~~ 240 (564)
|++..+..
T Consensus 167 ~~~~~~~~ 174 (207)
T 1wy7_A 167 FVVTHRLT 174 (207)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEE
Confidence 98765443
No 245
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.29 E-value=8.5e-12 Score=117.53 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=86.4
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCccc--ccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDD--LSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~--~~~~~~~~~fD 148 (564)
.++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|+++....+ .+++++++|+.... +......++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 5678999999999999999999876 7899999999999999998875433 46999999875321 11011127899
Q ss_pred EEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCC
Q 008457 149 IVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 149 ~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
+|++... ..+...+++++.++|||||++++.+...
T Consensus 143 ~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 143 LIYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred EEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 9997543 2467789999999999999999876543
No 246
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.29 E-value=1e-11 Score=117.80 Aligned_cols=112 Identities=15% Similarity=0.150 Sum_probs=89.2
Q ss_pred hHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCC
Q 008457 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQ 141 (564)
Q Consensus 63 ~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~ 141 (564)
+...+.+.+...++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|+++....+ .++.+..+|+. . +
T Consensus 79 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-~----~ 152 (235)
T 1jg1_A 79 MVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS-K----G 152 (235)
T ss_dssp HHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG-G----C
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc-c----C
Confidence 344455556667889999999999999999999865 799999999999999998865433 46889888872 2 2
Q ss_pred CCC-CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCC
Q 008457 142 ISP-SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 142 ~~~-~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
++. .+||+|++..++++++ .++.+.|+|||.+++.....
T Consensus 153 ~~~~~~fD~Ii~~~~~~~~~--------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAGAPKIP--------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CGGGCCEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEECSS
T ss_pred CCCCCCccEEEECCcHHHHH--------HHHHHhcCCCcEEEEEEecC
Confidence 233 3599999999999985 26789999999999986543
No 247
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.29 E-value=3.6e-11 Score=117.40 Aligned_cols=109 Identities=15% Similarity=0.164 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc------CCCeeEEEecCCcccccCCCCCCce
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT------ETRVSTFVCDLISDDLSRQISPSSI 147 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~------~~~i~~~~~d~~~~~~~~~~~~~~f 147 (564)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++.... ..+++++.+|....- ....++|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l---~~~~~~f 158 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV---NQTSQTF 158 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC------CCCCCE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHH---hhcCCCc
Confidence 5678999999999999999998766789999999999999999976432 358999999986431 1246789
Q ss_pred eEEEEcccccCCChhHH--HHHHHHHHhccCCCeEEEEEe
Q 008457 148 DIVTMVFVLSAVSPEKM--SLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 148 D~V~~~~vl~~~~~~~~--~~~l~~~~r~LkpgG~lii~~ 185 (564)
|+|++.......+...+ ..+++.++++|+|||++++..
T Consensus 159 DvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 99999655433322222 679999999999999999864
No 248
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.29 E-value=1.2e-11 Score=118.38 Aligned_cols=109 Identities=12% Similarity=0.107 Sum_probs=86.8
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDI 149 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~ 149 (564)
..++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|+++....+ .++++.++|+... ++.....++||+
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-l~~~~~~~~fD~ 139 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS-LESLGECPAFDL 139 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH-HHTCCSCCCCSE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH-HHhcCCCCCeEE
Confidence 35789999999999999999999876 7899999999999999998875433 4799999998542 111112358999
Q ss_pred EEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 150 VTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 150 V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
|++... ......+++++.++|||||++++.+..
T Consensus 140 V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 140 IFIDAD-----KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp EEECSC-----GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred EEECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 998553 245677999999999999999986554
No 249
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.29 E-value=7e-12 Score=117.97 Aligned_cols=111 Identities=12% Similarity=0.091 Sum_probs=86.3
Q ss_pred cCCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCC-CCCCce
Q 008457 72 SGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQ-ISPSSI 147 (564)
Q Consensus 72 ~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~-~~~~~f 147 (564)
...++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|+++....+ .+++++++|+.......+ -..++|
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 335789999999999999999999877 7899999999999999998865433 469999999854211000 012579
Q ss_pred eEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 148 DIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 148 D~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
|+|++.... .....+++++.++|+|||.+++.+..
T Consensus 135 D~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 135 DFIFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp SEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred CEEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 999986542 35678999999999999999886544
No 250
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.28 E-value=1.4e-11 Score=116.18 Aligned_cols=103 Identities=18% Similarity=0.110 Sum_probs=84.4
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChHHHHHHHhccccc------CCCeeEEEecCCcccccCCCCCC
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFT------ETRVSTFVCDLISDDLSRQISPS 145 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~~l~~a~~~~~~~------~~~i~~~~~d~~~~~~~~~~~~~ 145 (564)
..++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|+++.... ..++.+.++|+... ....+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~~~ 150 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----YAEEA 150 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----CGGGC
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC----cccCC
Confidence 4678999999999999999999873 5579999999999999999876542 24789999988632 12356
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
+||+|++...++++. +++.++|||||.+++....
T Consensus 151 ~fD~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 151 PYDAIHVGAAAPVVP--------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred CcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 899999999888773 5788999999999997654
No 251
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.28 E-value=2.8e-13 Score=129.29 Aligned_cols=101 Identities=17% Similarity=0.265 Sum_probs=85.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ .+++++++|+.... ++++||+|+
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~D~v~ 149 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-----SFLKADVVF 149 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-----GGCCCSEEE
T ss_pred cCCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-----ccCCCCEEE
Confidence 47899999999999999999988 6899999999999999998876544 47999999986432 457899999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEE
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLF 183 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii 183 (564)
++..+++.. +....+.+++++|+|||.+++
T Consensus 150 ~~~~~~~~~--~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 150 LSPPWGGPD--YATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp ECCCCSSGG--GGGSSSBCTTTSCSSCHHHHH
T ss_pred ECCCcCCcc--hhhhHHHHHHhhcCCcceeHH
Confidence 999999874 444577889999999999765
No 252
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.28 E-value=8.9e-12 Score=121.62 Aligned_cols=109 Identities=17% Similarity=0.211 Sum_probs=86.5
Q ss_pred CCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc-CCCeeEEEecCCcccccCCCCCCceeEEEEcc
Q 008457 76 RKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSIDIVTMVF 154 (564)
Q Consensus 76 ~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~-~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~~ 154 (564)
..+|||||||+|.++..+++.+|+.+|+++|+++.+++.|++++... ..+++++++|....- ..+++++||+|++..
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l--~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVA--ESFTPASRDVIIRDV 167 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHH--HTCCTTCEEEEEECC
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHH--hhccCCCCCEEEECC
Confidence 35999999999999999999888999999999999999999987543 468999999985421 123567999999965
Q ss_pred cccCCChhH--HHHHHHHHHhccCCCeEEEEEec
Q 008457 155 VLSAVSPEK--MSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 155 vl~~~~~~~--~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
..+...... ...++++++++|+|||++++...
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 433222122 26799999999999999998643
No 253
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.28 E-value=2.4e-11 Score=114.36 Aligned_cols=129 Identities=20% Similarity=0.265 Sum_probs=94.5
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++..++.. +.+|+++|+++.+++.++++ . .+.+...+..+. .........+|
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~---~-------~~~~~~~~~~~~---~~~~~~~~~~f 117 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA---G-------AGEVHLASYAQL---AEAKVPVGKDY 117 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT---C-------SSCEEECCHHHH---HTTCSCCCCCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh---c-------ccccchhhHHhh---cccccccCCCc
Confidence 5589999999999777777766 55899999999999999987 1 122333222111 00011234469
Q ss_pred cEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee------------------------------ccC
Q 008457 456 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF------------------------------RQV 505 (564)
Q Consensus 456 D~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~------------------------------r~~ 505 (564)
|+|+++.+++ ..+...+++.+.++| +|+| .++++... +..
T Consensus 118 D~v~~~~~l~-~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (227)
T 3e8s_A 118 DLICANFALL-HQDIIELLSAMRTLL-VPGG--------ALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFR 187 (227)
T ss_dssp EEEEEESCCC-SSCCHHHHHHHHHTE-EEEE--------EEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEEC
T ss_pred cEEEECchhh-hhhHHHHHHHHHHHh-CCCe--------EEEEEecCccccCccccccccchhhhhccccCcccceEEEe
Confidence 9999999999 889999999999999 9988 77776531 112
Q ss_pred ChhHHHHHHHHcCCeEEEEcCCC
Q 008457 506 DEPSMLSAATQCGFRLVDKWPSK 528 (564)
Q Consensus 506 ~~~~~~~~~~~~g~~~~~~~~~~ 528 (564)
+...+.+.+.++||+++++.+..
T Consensus 188 ~~~~~~~~l~~aGf~~~~~~~~~ 210 (227)
T 3e8s_A 188 TLASWLNALDMAGLRLVSLQEPQ 210 (227)
T ss_dssp CHHHHHHHHHHTTEEEEEEECCC
T ss_pred cHHHHHHHHHHcCCeEEEEecCC
Confidence 44678899999999999987543
No 254
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.28 E-value=4.7e-11 Score=113.83 Aligned_cols=96 Identities=15% Similarity=0.107 Sum_probs=76.0
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++..++.. ..+|+++|+++.+++.+++++..++. ++.+...|..+. +.+ ++|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~-------~~~-~~f 102 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGL-----KPRLACQDISNL-------NIN-RKF 102 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTC-----CCEEECCCGGGC-------CCS-CCE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCC-----CeEEEecccccC-------Ccc-CCc
Confidence 6789999999999877777666 46899999999999999999877553 345554443321 122 689
Q ss_pred cEEEEec-eeeCC---CChHHHHHHHHHHhhccCC
Q 008457 456 EVILGTD-VSYIP---EAILPLFATAKELTASSNK 486 (564)
Q Consensus 456 D~Ii~~d-~~y~~---~~~~~l~~~~~~ll~~~~g 486 (564)
|+|+++. ++.+. .....+++.+.++| +|+|
T Consensus 103 D~v~~~~~~l~~~~~~~~~~~~l~~~~~~L-~pgG 136 (246)
T 1y8c_A 103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHL-KEGG 136 (246)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHTTE-EEEE
T ss_pred eEEEEcCccccccCCHHHHHHHHHHHHHhc-CCCc
Confidence 9999996 88876 67889999999999 9988
No 255
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.28 E-value=1.7e-11 Score=117.14 Aligned_cols=111 Identities=15% Similarity=0.239 Sum_probs=84.7
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc---------CCCeeEEEecCCcccccCCCCC
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT---------ETRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~---------~~~i~~~~~d~~~~~~~~~~~~ 144 (564)
.++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.|+++.... ..++.++++|+... +...++.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~-l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKF-LPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSC-GGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHH-HHHhccc
Confidence 3678999999999999999999988889999999999999998765422 25799999998642 2223567
Q ss_pred CceeEEEEcccccCCChh------HHHHHHHHHHhccCCCeEEEEEe
Q 008457 145 SSIDIVTMVFVLSAVSPE------KMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~~~~------~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
+++|.|++...-.+.... ....++.++.++|+|||.|++.+
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 899999875422211000 01479999999999999999864
No 256
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.28 E-value=2.7e-11 Score=117.88 Aligned_cols=125 Identities=11% Similarity=0.130 Sum_probs=95.9
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++..++..++.+|+++|+|+.+++.+++|+..|+.. +++.+...|..+. ...++|
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~---~~v~~~~~D~~~~--------~~~~~f 193 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE---DRMSAYNMDNRDF--------PGENIA 193 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT---TTEEEECSCTTTC--------CCCSCE
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCC---ceEEEEECCHHHh--------cccCCc
Confidence 58899999999999988888877668999999999999999999999874 4576666555432 125689
Q ss_pred cEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----cCChhHHHHHHHHcCCeEEEE
Q 008457 456 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----QVDEPSMLSAATQCGFRLVDK 524 (564)
Q Consensus 456 D~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-----~~~~~~~~~~~~~~g~~~~~~ 524 (564)
|+|++. .. .....+++.+.++| +|+| .+++..... ......+.+.+.+.|+.+..+
T Consensus 194 D~Vi~~-~p---~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 194 DRILMG-YV---VRTHEFIPKALSIA-KDGA--------IIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp EEEEEC-CC---SSGGGGHHHHHHHE-EEEE--------EEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEC-Cc---hhHHHHHHHHHHHC-CCCe--------EEEEEEeeccccccccHHHHHHHHHHHcCCeeEEe
Confidence 999863 33 34467899999999 9987 666655543 122346677888899998873
No 257
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.28 E-value=5.8e-11 Score=116.08 Aligned_cols=110 Identities=9% Similarity=0.010 Sum_probs=88.1
Q ss_pred CCCCCCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhh
Q 008457 371 NPTIVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIK 448 (564)
Q Consensus 371 ~~~~~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~ 448 (564)
.....++.+|||+|||+|.++..++... +.+|+++|+++.+++.+++++..++. ++.+...|..+.
T Consensus 17 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~v~~~~~d~~~~------- 84 (284)
T 3gu3_A 17 VWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-----DSEFLEGDATEI------- 84 (284)
T ss_dssp TSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-----EEEEEESCTTTC-------
T ss_pred HhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-----ceEEEEcchhhc-------
Confidence 3355678899999999997777777653 46999999999999999999876542 566666665532
Q ss_pred hhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 449 EENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 449 ~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
+. +++||+|++..++.+..+...+++.+.++| +|+| .+++....
T Consensus 85 ~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~ 128 (284)
T 3gu3_A 85 EL-NDKYDIAICHAFLLHMTTPETMLQKMIHSV-KKGG--------KIICFEPH 128 (284)
T ss_dssp CC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTE-EEEE--------EEEEEECC
T ss_pred Cc-CCCeeEEEECChhhcCCCHHHHHHHHHHHc-CCCC--------EEEEEecc
Confidence 12 358999999999999999999999999999 9988 77766543
No 258
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.28 E-value=5.5e-12 Score=119.59 Aligned_cols=116 Identities=13% Similarity=0.169 Sum_probs=90.8
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQIS 143 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~ 143 (564)
.+...+...++.+|||+|||+|..+..+++..|+.+|+++|+++.+++.|+++....+ .++.+.++|+...... ...
T Consensus 45 ~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~ 123 (233)
T 2gpy_A 45 SLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEK-LEL 123 (233)
T ss_dssp HHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH-HTT
T ss_pred HHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh-ccc
Confidence 3334444457889999999999999999999888899999999999999998865433 4689999888642110 001
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
+++||+|++....+ +...+++++.++|+|||.+++.+..
T Consensus 124 ~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 124 YPLFDVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp SCCEEEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CCCccEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 57899999977643 5678999999999999999997543
No 259
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.27 E-value=1.3e-11 Score=121.94 Aligned_cols=132 Identities=13% Similarity=0.116 Sum_probs=102.5
Q ss_pred CCCCeEEEeCCcccHHHHHHH-h-cCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 375 VAGKKVLELGCGCGGICSMVA-A-GSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~-~-~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.++.+|||+|||+|.++..++ . ....+|+++|+++.+++.+++|+..++.. +++.+...|+.+. +..
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-------~~~- 185 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA---GQITLHRQDAWKL-------DTR- 185 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG---GGEEEEECCGGGC-------CCC-
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC---CceEEEECchhcC-------Ccc-
Confidence 477899999999997766664 2 34569999999999999999999887763 4577777766532 223
Q ss_pred CCccEEEEeceeeCCCChHH---HHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------------------
Q 008457 453 EGFEVILGTDVSYIPEAILP---LFATAKELTASSNKSLREDQQPAFILCHIFR-------------------------- 503 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~~---l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-------------------------- 503 (564)
++||+|+++.++++..+... +++.+.++| +|+| .++++...+
T Consensus 186 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 256 (305)
T 3ocj_A 186 EGYDLLTSNGLNIYEPDDARVTELYRRFWQAL-KPGG--------ALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLV 256 (305)
T ss_dssp SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHE-EEEE--------EEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHH
T ss_pred CCeEEEEECChhhhcCCHHHHHHHHHHHHHhc-CCCe--------EEEEEecCCCCcccccccceeeccccchhhhhhhH
Confidence 79999999998887766665 799999999 9988 777766321
Q ss_pred -----------cCChhHHHHHHHHcCCeEEEEcC
Q 008457 504 -----------QVDEPSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 504 -----------~~~~~~~~~~~~~~g~~~~~~~~ 526 (564)
..+...+.+.++++||+++++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 257 FTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp HHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEc
Confidence 02345778889999999999874
No 260
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.27 E-value=1.9e-11 Score=114.48 Aligned_cols=124 Identities=7% Similarity=0.061 Sum_probs=94.2
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC-
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE- 453 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~- 453 (564)
++.+|||+|||+|.++..++..+ ..+|+++|+++.+++.+++|+..|++. +++.+..-|+.+. +.++
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~---~~I~v~~gD~l~~--------~~~~~ 89 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT---EQIDVRKGNGLAV--------IEKKD 89 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT---TTEEEEECSGGGG--------CCGGG
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---ceEEEEecchhhc--------cCccc
Confidence 67799999999999988888876 458999999999999999999999984 5688876665322 1222
Q ss_pred CccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEE
Q 008457 454 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDK 524 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~ 524 (564)
+||+|+.+-+.- ..+..++......| ++.+ .++++.. ...+.+.+++.+.||.+.+-
T Consensus 90 ~~D~IviagmGg--~lI~~IL~~~~~~L-~~~~--------~lIlq~~---~~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 90 AIDTIVIAGMGG--TLIRTILEEGAAKL-AGVT--------KLILQPN---IAAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp CCCEEEEEEECH--HHHHHHHHHTGGGG-TTCC--------EEEEEES---SCHHHHHHHHHHHTEEEEEE
T ss_pred cccEEEEeCCch--HHHHHHHHHHHHHh-CCCC--------EEEEEcC---CChHHHHHHHHHCCCEEEEE
Confidence 699988654332 44666777777788 7655 7877753 34667889999999998543
No 261
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.27 E-value=1.6e-12 Score=139.35 Aligned_cols=111 Identities=13% Similarity=0.146 Sum_probs=87.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
..+.+|||||||+|.++..|++. |.+|+|||+|+.+++.|+.+....+ .+++|.++++.+. ...+.+++||+|+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEV--IAALEEGEFDLAIG 140 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHH--HHHCCTTSCSEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHH--hhhccCCCccEEEE
Confidence 35689999999999999999998 8899999999999999999876554 5799999988543 22346789999999
Q ss_pred cccccCCChhHHHHHHHHHHhccCCCeEEEEEecCC
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
..+++|++..+....+..+.+.|+++|..++.....
T Consensus 141 ~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 141 LSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp ESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred CcchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 999999963332344556777788888777655443
No 262
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.26 E-value=2.5e-11 Score=120.79 Aligned_cols=110 Identities=16% Similarity=0.083 Sum_probs=82.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-C--CeeEEEecCCcccccCCCCCCceeEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-T--RVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~--~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++....+ . +++++++|+...........++||+|
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 46789999999999999999987 5599999999999999998865433 2 48999999854211000014689999
Q ss_pred EEccc----------ccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 151 TMVFV----------LSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 151 ~~~~v----------l~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
++.-- +++ .++...+++++.++|+|||.+++....
T Consensus 230 i~dPP~~~~~~~~~~~~~--~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQL--FDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp EECCCSEEECTTCCEEEH--HHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred EECCccccCCchHHHHHH--HHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 99432 112 246788999999999999998876433
No 263
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.26 E-value=9.3e-11 Score=108.20 Aligned_cols=91 Identities=19% Similarity=0.188 Sum_probs=71.9
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (564)
..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++.. +++++++|+.. + + ++||+|++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~--~----~-~~~D~v~~ 116 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSE--I----S-GKYDTWIM 116 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGG--C----C-CCEEEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHH--C----C-CCeeEEEE
Confidence 357889999999999999999887 33479999999999999998865 68999999864 2 2 68999999
Q ss_pred cccccCCChhHHHHHHHHHHhcc
Q 008457 153 VFVLSAVSPEKMSLVLQNIKKVL 175 (564)
Q Consensus 153 ~~vl~~~~~~~~~~~l~~~~r~L 175 (564)
+..++|++......+++++.+.+
T Consensus 117 ~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 117 NPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CCCC-------CHHHHHHHHHHE
T ss_pred CCCchhccCchhHHHHHHHHHhc
Confidence 99999986433457899999998
No 264
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.26 E-value=1.4e-11 Score=113.47 Aligned_cols=152 Identities=14% Similarity=0.091 Sum_probs=103.4
Q ss_pred CCCCeEEEeCCcccHHHHHHHhc--CCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~--~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.++.+|||+|||+|.++..++.. ...+|+++|+++.+++.+++|+..++.. .++.+...|..+ +....+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~------~~~~~~ 91 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI---DRVTLIKDGHQN------MDKYID 91 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG---GGEEEECSCGGG------GGGTCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CCeEEEECCHHH------Hhhhcc
Confidence 36789999999999888777776 3469999999999999999999988763 456666555422 112345
Q ss_pred CCccEEEEeceeeCC---------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCC----hh---HHHHHHHH
Q 008457 453 EGFEVILGTDVSYIP---------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD----EP---SMLSAATQ 516 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~---------~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~----~~---~~~~~~~~ 516 (564)
++||+|++...++.. .....+++.+.++| +|+| .++++....... .. .++..+..
T Consensus 92 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L-k~gG--------~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (197)
T 3eey_A 92 CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELL-VTGG--------IITVVIYYGGDTGFEEKEKVLEFLKGVDQ 162 (197)
T ss_dssp SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHE-EEEE--------EEEEEECCBTTTBSHHHHHHHHHHTTSCT
T ss_pred CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhC-cCCC--------EEEEEEccCCCCcHHHHHHHHHHHHhCCC
Confidence 789999966433221 13457999999999 9987 777665332211 11 23333345
Q ss_pred cCCeEEEEcCCCCCCCCccccccccccC
Q 008457 517 CGFRLVDKWPSKNSASPSESIISSWFSE 544 (564)
Q Consensus 517 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (564)
.+|.+....-...+..+++-++..+.++
T Consensus 163 ~~~~v~~~~~~~~~~~pp~~~~~~~~~~ 190 (197)
T 3eey_A 163 KKFIVQRTDFINQANCPPILVCIEKISE 190 (197)
T ss_dssp TTEEEEEEEETTCCSCCCEEEEEEECCS
T ss_pred CcEEEEEEEeccCccCCCeEEEEEEccc
Confidence 6788888765666666666666655543
No 265
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.26 E-value=1.1e-11 Score=116.85 Aligned_cols=107 Identities=10% Similarity=0.096 Sum_probs=85.1
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhC-----CCcEEEEEeCChHHHHHHHhccccc------CCCeeEEEecCCcccccCC
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAY-----PDVFVYACDFSPRAVNLVMTHKDFT------ETRVSTFVCDLISDDLSRQ 141 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~-----~~~~v~~iD~s~~~l~~a~~~~~~~------~~~i~~~~~d~~~~~~~~~ 141 (564)
..++.+|||||||+|.++..+++.. |..+|+++|+++.+++.|+++.... ..++.+..+|+........
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4678999999999999999999885 4569999999999999999886543 2579999999864210000
Q ss_pred CCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 142 ISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 142 ~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
...++||+|++...++++ ++++.++|||||++++....
T Consensus 158 ~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL--------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEcc
Confidence 235689999999998876 36788999999999997653
No 266
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.26 E-value=3e-11 Score=116.67 Aligned_cols=103 Identities=11% Similarity=0.062 Sum_probs=77.5
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCc
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 442 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~ 442 (564)
.+.+.+.... .++.+|||||||+|.++..++.. ..+|+++|+++.+++.++++.. ++.+...|..+.
T Consensus 39 ~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~d~~~~- 105 (263)
T 3pfg_A 39 DLAALVRRHS--PKAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP---------DAVLHHGDMRDF- 105 (263)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTC-
T ss_pred HHHHHHHhhC--CCCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC---------CCEEEECChHHC-
Confidence 3445554432 25689999999999777777665 4589999999999999998742 355665555432
Q ss_pred cchhhhhhcCCCccEEEEec-eeeCC---CChHHHHHHHHHHhhccCC
Q 008457 443 HIEAIKEENNEGFEVILGTD-VSYIP---EAILPLFATAKELTASSNK 486 (564)
Q Consensus 443 ~~~~~~~~~~~~fD~Ii~~d-~~y~~---~~~~~l~~~~~~ll~~~~g 486 (564)
+. +++||+|++.. ++.+. +....+++.+.++| +|+|
T Consensus 106 ------~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L-~pgG 145 (263)
T 3pfg_A 106 ------SL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHV-LPDG 145 (263)
T ss_dssp ------CC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTE-EEEE
T ss_pred ------Cc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhc-CCCc
Confidence 11 56899999986 87775 46778899999999 9988
No 267
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.26 E-value=2.9e-11 Score=111.76 Aligned_cols=127 Identities=17% Similarity=0.096 Sum_probs=93.6
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++ +|||+|||+|.++..++.. +.+|+++|+++.+++.++++...++. ++.+...|..+. ++++++|
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~-------~~~~~~f 95 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV-----KITTVQSNLADF-------DIVADAW 95 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC-----CEEEECCBTTTB-------SCCTTTC
T ss_pred CC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC-----ceEEEEcChhhc-------CCCcCCc
Confidence 45 9999999999777777665 45999999999999999999887653 356655555432 2345789
Q ss_pred cEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec---------------cCChhHHHHHHHHcCCe
Q 008457 456 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR---------------QVDEPSMLSAATQCGFR 520 (564)
Q Consensus 456 D~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r---------------~~~~~~~~~~~~~~g~~ 520 (564)
|+|+++.+.+.......+++.+.++| +|+| .+++..... ..+...+.+.+. ||+
T Consensus 96 D~v~~~~~~~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~ 164 (202)
T 2kw5_A 96 EGIVSIFCHLPSSLRQQLYPKVYQGL-KPGG--------VFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLN 164 (202)
T ss_dssp SEEEEECCCCCHHHHHHHHHHHHTTC-CSSE--------EEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSC
T ss_pred cEEEEEhhcCCHHHHHHHHHHHHHhc-CCCc--------EEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--Cce
Confidence 99998765554567889999999999 9988 777765431 123345555555 999
Q ss_pred EEEEcCC
Q 008457 521 LVDKWPS 527 (564)
Q Consensus 521 ~~~~~~~ 527 (564)
++++...
T Consensus 165 v~~~~~~ 171 (202)
T 2kw5_A 165 WLIANNL 171 (202)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9988544
No 268
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.26 E-value=7.5e-11 Score=112.28 Aligned_cols=95 Identities=18% Similarity=0.210 Sum_probs=73.5
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++..++.. .+|+++|+++.+++.+++++..++. ++.+...|..+. +. +++|
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~-------~~-~~~f 97 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNR-----HVDFWVQDMREL-------EL-PEPV 97 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTC-----CCEEEECCGGGC-------CC-SSCE
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCC-----ceEEEEcChhhc-------CC-CCCc
Confidence 5689999999999777766655 7999999999999999999887652 355555544322 11 2689
Q ss_pred cEEEEe-ceeeCC---CChHHHHHHHHHHhhccCC
Q 008457 456 EVILGT-DVSYIP---EAILPLFATAKELTASSNK 486 (564)
Q Consensus 456 D~Ii~~-d~~y~~---~~~~~l~~~~~~ll~~~~g 486 (564)
|+|++. +++.+. .....+++.+.++| +|+|
T Consensus 98 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L-~pgG 131 (243)
T 3d2l_A 98 DAITILCDSLNYLQTEADVKQTFDSAARLL-TDGG 131 (243)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHHHE-EEEE
T ss_pred CEEEEeCCchhhcCCHHHHHHHHHHHHHhc-CCCe
Confidence 999986 477665 56778899999999 9987
No 269
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.26 E-value=5.1e-11 Score=111.40 Aligned_cols=126 Identities=11% Similarity=0.066 Sum_probs=95.7
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
..++.+|||+|||+|.++..++.. +.+|+++|+++.+++.+++ ++. .++.+...|..+. ..++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~----~~~----~~~~~~~~d~~~~--------~~~~ 106 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR----HGL----DNVEFRQQDLFDW--------TPDR 106 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG----GCC----TTEEEEECCTTSC--------CCSS
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh----cCC----CCeEEEecccccC--------CCCC
Confidence 446779999999999888777776 5699999999999999887 232 3567766665432 2457
Q ss_pred CccEEEEeceeeCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec----------------------------
Q 008457 454 GFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFR---------------------------- 503 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r---------------------------- 503 (564)
+||+|+++.++++... ...+++.+.++| +|+| .++++...+
T Consensus 107 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (218)
T 3ou2_A 107 QWDAVFFAHWLAHVPDDRFEAFWESVRSAV-APGG--------VVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFR 177 (218)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEEECCCC------------CEEEEECTTSCEEE
T ss_pred ceeEEEEechhhcCCHHHHHHHHHHHHHHc-CCCe--------EEEEEeCCCCccccchhhhcccccceeeecCCcchhh
Confidence 9999999999988776 489999999999 9988 666664321
Q ss_pred ----cCChhHHHHHHHHcCCeEEEEc
Q 008457 504 ----QVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 504 ----~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
..+...+.+.++++||+++...
T Consensus 178 ~~~~~~~~~~~~~~l~~aGf~v~~~~ 203 (218)
T 3ou2_A 178 IVKVFRSPAELTERLTALGWSCSVDE 203 (218)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred HhhcCCCHHHHHHHHHHCCCEEEeee
Confidence 1244567888889999966543
No 270
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.26 E-value=2.8e-11 Score=121.29 Aligned_cols=112 Identities=17% Similarity=0.101 Sum_probs=84.8
Q ss_pred HhhhccCCCCCeEEEEcCCccccHHHHHHh-CCCcEEEEEeCChHHHHHHHhccccc------------CCCeeEEEecC
Q 008457 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFT------------ETRVSTFVCDL 133 (564)
Q Consensus 67 ~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~~iD~s~~~l~~a~~~~~~~------------~~~i~~~~~d~ 133 (564)
+...+...++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|+++.... ..++++..+|+
T Consensus 97 ~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~ 176 (336)
T 2b25_A 97 ILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI 176 (336)
T ss_dssp HHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred HHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence 344455678999999999999999999987 56689999999999999999876531 25799999998
Q ss_pred CcccccCCCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 134 ISDDLSRQISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 134 ~~~~~~~~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
.... .++++++||+|++...- +..++.++.++|+|||.+++....
T Consensus 177 ~~~~--~~~~~~~fD~V~~~~~~-------~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 177 SGAT--EDIKSLTFDAVALDMLN-------PHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp TCCC---------EEEEEECSSS-------TTTTHHHHGGGEEEEEEEEEEESS
T ss_pred HHcc--cccCCCCeeEEEECCCC-------HHHHHHHHHHhcCCCcEEEEEeCC
Confidence 6531 13456789999995432 223789999999999999987654
No 271
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.26 E-value=1.7e-11 Score=119.49 Aligned_cols=126 Identities=17% Similarity=0.182 Sum_probs=96.1
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||+|||+|.++..++. ...+|+++|+++.+++.++++. .++.+...|..+. +. +++
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-------~~-~~~ 117 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY---------PHLHFDVADARNF-------RV-DKP 117 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTC-------CC-SSC
T ss_pred CCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhC-------Cc-CCC
Confidence 4678999999999977777766 5569999999999999998874 1244455544332 12 468
Q ss_pred ccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccC-----------------------------
Q 008457 455 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQV----------------------------- 505 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~----------------------------- 505 (564)
||+|+++.++++..+...+++.+.++| +|+| .+++.......
T Consensus 118 fD~v~~~~~l~~~~d~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (279)
T 3ccf_A 118 LDAVFSNAMLHWVKEPEAAIASIHQAL-KSGG--------RFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFP 188 (279)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHE-EEEE--------EEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCC
T ss_pred cCEEEEcchhhhCcCHHHHHHHHHHhc-CCCc--------EEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCC
Confidence 999999999999899999999999999 9988 77776553211
Q ss_pred ChhHHHHHHHHcCCeEEEEcCC
Q 008457 506 DEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 506 ~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
+...+.+.+.++||+++++...
T Consensus 189 ~~~~~~~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 189 SIGEYVNILEKQGFDVTYAALF 210 (279)
T ss_dssp CHHHHHHHHHHHTEEEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEEEe
Confidence 2345677788899999877533
No 272
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.25 E-value=1.8e-11 Score=118.05 Aligned_cols=140 Identities=10% Similarity=0.046 Sum_probs=99.6
Q ss_pred HHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCcc
Q 008457 364 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 443 (564)
Q Consensus 364 l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~ 443 (564)
+++.+.......++.+|||+|||+|.++..++. ...+|+++|+|+.+++.++++. ++.+...|+.+.
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~d~~~~-- 88 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVHP----------QVEWFTGYAENL-- 88 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCCT----------TEEEECCCTTSC--
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhcc----------CCEEEECchhhC--
Confidence 445554443445788999999999977777766 4569999999998888765542 456665555432
Q ss_pred chhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------------
Q 008457 444 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-------------------- 503 (564)
Q Consensus 444 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-------------------- 503 (564)
++++++||+|++..++++..+...+++.+.++| + +| .+++.....
T Consensus 89 -----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L-k-gG--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
T 3ege_A 89 -----ALPDKSVDGVISILAIHHFSHLEKSFQEMQRII-R-DG--------TIVLLTFDIRLAQRIWLYDYFPFLWEDAL 153 (261)
T ss_dssp -----CSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHB-C-SS--------CEEEEEECGGGCCCCGGGGTCHHHHHHHH
T ss_pred -----CCCCCCEeEEEEcchHhhccCHHHHHHHHHHHh-C-Cc--------EEEEEEcCCchhHHHHHHHHHHHHhhhhh
Confidence 235679999999999999999999999999999 8 77 444443331
Q ss_pred -cCCh-hHHHHHHHHcCCeEEEEcCCCCCCC
Q 008457 504 -QVDE-PSMLSAATQCGFRLVDKWPSKNSAS 532 (564)
Q Consensus 504 -~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~ 532 (564)
.... ..+. .++++||..+++.....|.+
T Consensus 154 ~~~~~~~~~~-~l~~aGF~~v~~~~~~~p~~ 183 (261)
T 3ege_A 154 RFLPLDEQIN-LLQENTKRRVEAIPFLLPHD 183 (261)
T ss_dssp TSCCHHHHHH-HHHHHHCSEEEEEECCEETT
T ss_pred hhCCCHHHHH-HHHHcCCCceeEEEecCCCc
Confidence 1111 2344 88899999888865544433
No 273
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.25 E-value=1.6e-11 Score=119.72 Aligned_cols=111 Identities=17% Similarity=0.136 Sum_probs=89.5
Q ss_pred HHhhhccCCCCCeEEEEcCCccccHHHHHHh-CCCcEEEEEeCChHHHHHHHhccccc----CCCeeEEEecCCcccccC
Q 008457 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFT----ETRVSTFVCDLISDDLSR 140 (564)
Q Consensus 66 ~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~~iD~s~~~l~~a~~~~~~~----~~~i~~~~~d~~~~~~~~ 140 (564)
.+...+...++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|+++.... ..++.+.++|+...
T Consensus 90 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~---- 165 (280)
T 1i9g_A 90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS---- 165 (280)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC----
T ss_pred HHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc----
Confidence 3344455578899999999999999999985 56789999999999999999886543 35789999998653
Q ss_pred CCCCCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 141 QISPSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 141 ~~~~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
++++++||+|++. ++ ++..+++++.++|+|||.+++..+.
T Consensus 166 ~~~~~~~D~v~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 166 ELPDGSVDRAVLD-----ML--APWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CCCTTCEEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CCCCCceeEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3457789999983 32 3457899999999999999997654
No 274
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.25 E-value=6.9e-12 Score=114.35 Aligned_cols=128 Identities=15% Similarity=0.258 Sum_probs=91.8
Q ss_pred HHHHHHHHhcCC-CCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecC
Q 008457 361 AHLMAAVLARNP-TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWG 439 (564)
Q Consensus 361 ~~~l~~~l~~~~-~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~ 439 (564)
...+.+.+.... ...++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++|+..++.. .++.+...|+.
T Consensus 28 ~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~~~~~~~d~~ 104 (187)
T 2fhp_A 28 TDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEP---EKFEVRKMDAN 104 (187)
T ss_dssp CHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCG---GGEEEEESCHH
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCC---cceEEEECcHH
Confidence 334444443321 23478899999999998888777766679999999999999999999988753 45677665553
Q ss_pred CCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHH--HHHhhccCCCCCCCCCcEEEEEEeecc
Q 008457 440 NRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATA--KELTASSNKSLREDQQPAFILCHIFRQ 504 (564)
Q Consensus 440 ~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~--~~ll~~~~g~~~~~~~~~~~~~~~~r~ 504 (564)
+. ...+ +...++||+|++..+ |.....+..++.+ .++| +|+| .++++.....
T Consensus 105 ~~--~~~~-~~~~~~fD~i~~~~~-~~~~~~~~~~~~l~~~~~L-~~gG--------~l~~~~~~~~ 158 (187)
T 2fhp_A 105 RA--LEQF-YEEKLQFDLVLLDPP-YAKQEIVSQLEKMLERQLL-TNEA--------VIVCETDKTV 158 (187)
T ss_dssp HH--HHHH-HHTTCCEEEEEECCC-GGGCCHHHHHHHHHHTTCE-EEEE--------EEEEEEETTC
T ss_pred HH--HHHH-HhcCCCCCEEEECCC-CCchhHHHHHHHHHHhccc-CCCC--------EEEEEeCCcc
Confidence 21 1000 112578999996555 7777888889888 7789 9988 7877766554
No 275
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.25 E-value=1e-11 Score=114.93 Aligned_cols=105 Identities=9% Similarity=0.048 Sum_probs=82.7
Q ss_pred CCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
++.+|||+|||+|.++..++... ..+|+++|+|+.|++.|+++....+ .+++++++|+... + +...++||+|++.
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~-~--~~~~~~fD~V~~~ 129 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSF-L--AQKGTPHNIVFVD 129 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHH-H--SSCCCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHH-H--hhcCCCCCEEEEC
Confidence 57899999999999999887773 3489999999999999998875444 4789999987542 1 2356789999998
Q ss_pred ccccCCChhHHHHHHHHHHh--ccCCCeEEEEEec
Q 008457 154 FVLSAVSPEKMSLVLQNIKK--VLKPTGYVLFRDY 186 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r--~LkpgG~lii~~~ 186 (564)
..++ . .....+++.+.+ +|+|||.+++...
T Consensus 130 ~p~~-~--~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 130 PPFR-R--GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp CSSS-T--TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCC-C--CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 7744 2 356677888865 5999999998754
No 276
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.24 E-value=1.6e-11 Score=115.90 Aligned_cols=110 Identities=11% Similarity=0.071 Sum_probs=87.1
Q ss_pred HHHhhhc--cCCCCCeEEEEcCCccccHHHHHHhCC------CcEEEEEeCChHHHHHHHhccccc------CCCeeEEE
Q 008457 65 KEWGRYF--SGAGRKDVLEVGCGAGNTIFPLIAAYP------DVFVYACDFSPRAVNLVMTHKDFT------ETRVSTFV 130 (564)
Q Consensus 65 ~~~~~~l--~~~~~~~VLDiGcG~G~~~~~l~~~~~------~~~v~~iD~s~~~l~~a~~~~~~~------~~~i~~~~ 130 (564)
..+.+.+ ...++.+|||||||+|.++..+++..+ ..+|+++|+++.+++.|+++.... ..++.+..
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 3344444 246789999999999999999988642 258999999999999999876533 35789999
Q ss_pred ecCCcccccCCCCC-CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 131 CDLISDDLSRQISP-SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 131 ~d~~~~~~~~~~~~-~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
+|... +++. ++||+|++..++++++ +++.+.|||||++++....
T Consensus 152 ~d~~~-----~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 152 GDGRK-----GYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp SCGGG-----CCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred CCccc-----CCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEec
Confidence 99864 2233 7899999999999884 5789999999999997654
No 277
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.24 E-value=4.7e-11 Score=114.90 Aligned_cols=109 Identities=12% Similarity=0.148 Sum_probs=85.3
Q ss_pred HHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccch
Q 008457 367 VLARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIE 445 (564)
Q Consensus 367 ~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~ 445 (564)
.+.......++.+|||||||+|.++..++... ..+|+++|+++.+++.++++. .++.+...|..+.
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~---- 90 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------PNTNFGKADLATW---- 90 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---------TTSEEEECCTTTC----
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---------CCcEEEECChhhc----
Confidence 34444445578899999999998877777653 568999999999999999871 3456666655432
Q ss_pred hhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 008457 446 AIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 501 (564)
Q Consensus 446 ~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~ 501 (564)
+ ++++||+|+++.++++..+...+++.+.++| +|+| .++++..
T Consensus 91 ---~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~ 133 (259)
T 2p35_A 91 ---K-PAQKADLLYANAVFQWVPDHLAVLSQLMDQL-ESGG--------VLAVQMP 133 (259)
T ss_dssp ---C-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGE-EEEE--------EEEEEEE
T ss_pred ---C-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhc-CCCe--------EEEEEeC
Confidence 1 3568999999999999999999999999999 9988 7777653
No 278
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.23 E-value=1.4e-11 Score=113.94 Aligned_cols=112 Identities=12% Similarity=0.039 Sum_probs=83.9
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC-
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG- 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~- 454 (564)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.+++|+..++... .++.+...|..+ .+..+.+++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~--~~v~~~~~d~~~-----~~~~~~~~~~ 125 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSS--EQAEVINQSSLD-----FLKQPQNQPH 125 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCT--TTEEEECSCHHH-----HTTSCCSSCC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCc--cceEEEECCHHH-----HHHhhccCCC
Confidence 678999999999988887777777799999999999999999999887520 245555433211 111122467
Q ss_pred ccEEEEeceeeCCCChHHHHHHH--HHHhhccCCCCCCCCCcEEEEEEeecc
Q 008457 455 FEVILGTDVSYIPEAILPLFATA--KELTASSNKSLREDQQPAFILCHIFRQ 504 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~~l~~~~--~~ll~~~~g~~~~~~~~~~~~~~~~r~ 504 (564)
||+|++..+ |.....+.+++.+ .++| +|+| .++++...+.
T Consensus 126 fD~I~~~~~-~~~~~~~~~l~~~~~~~~L-kpgG--------~l~i~~~~~~ 167 (201)
T 2ift_A 126 FDVVFLDPP-FHFNLAEQAISLLCENNWL-KPNA--------LIYVETEKDK 167 (201)
T ss_dssp EEEEEECCC-SSSCHHHHHHHHHHHTTCE-EEEE--------EEEEEEESSS
T ss_pred CCEEEECCC-CCCccHHHHHHHHHhcCcc-CCCc--------EEEEEECCCC
Confidence 999997655 7777788888888 5579 9988 8888776665
No 279
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.23 E-value=1.2e-11 Score=109.99 Aligned_cols=105 Identities=11% Similarity=0.120 Sum_probs=81.5
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
+..+|||||||+|.++..++... ..+|+++|+|+.|++.+++|+..++.. .++.+. | ... ..++++
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~---~~v~~~--d-----~~~---~~~~~~ 115 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTT---IKYRFL--N-----KES---DVYKGT 115 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCS---SEEEEE--C-----CHH---HHTTSE
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC---ccEEEe--c-----ccc---cCCCCC
Confidence 56799999999998877776652 349999999999999999999998874 345552 1 111 245678
Q ss_pred ccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 008457 455 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
||+|++.+++..-...+..+..+.+.| +|+| ++++++.|
T Consensus 116 ~DvVLa~k~LHlL~~~~~al~~v~~~L-~pgg---------vfISfptk 154 (200)
T 3fzg_A 116 YDVVFLLKMLPVLKQQDVNILDFLQLF-HTQN---------FVISFPIK 154 (200)
T ss_dssp EEEEEEETCHHHHHHTTCCHHHHHHTC-EEEE---------EEEEEECC
T ss_pred cChhhHhhHHHhhhhhHHHHHHHHHHh-CCCC---------EEEEeChH
Confidence 999999999887766666677899999 8875 77777754
No 280
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.23 E-value=6.6e-12 Score=113.54 Aligned_cols=112 Identities=15% Similarity=0.205 Sum_probs=83.9
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
..++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++|+..+++. .++.+...|+.+ ..+...+
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~------~~~~~~~ 99 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAE---NRFTLLKMEAER------AIDCLTG 99 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCG---GGEEEECSCHHH------HHHHBCS
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCC---CceEEEECcHHH------hHHhhcC
Confidence 4578899999999998888777776679999999999999999999988763 356665444321 1122345
Q ss_pred CccEEEEeceeeCCCChHHHHHHHH--HHhhccCCCCCCCCCcEEEEEEeecc
Q 008457 454 GFEVILGTDVSYIPEAILPLFATAK--ELTASSNKSLREDQQPAFILCHIFRQ 504 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~~~~l~~~~~--~ll~~~~g~~~~~~~~~~~~~~~~r~ 504 (564)
+||+|++.. .|.....+.+++.+. ++| +|+| .+++....+.
T Consensus 100 ~fD~i~~~~-~~~~~~~~~~~~~l~~~~~L-~~gG--------~l~~~~~~~~ 142 (177)
T 2esr_A 100 RFDLVFLDP-PYAKETIVATIEALAAKNLL-SEQV--------MVVCETDKTV 142 (177)
T ss_dssp CEEEEEECC-SSHHHHHHHHHHHHHHTTCE-EEEE--------EEEEEEETTC
T ss_pred CCCEEEECC-CCCcchHHHHHHHHHhCCCc-CCCc--------EEEEEECCcc
Confidence 799998654 455556777888887 889 9988 8887766554
No 281
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.23 E-value=2e-11 Score=118.77 Aligned_cols=143 Identities=15% Similarity=0.190 Sum_probs=102.5
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEee
Q 008457 359 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 437 (564)
Q Consensus 359 ~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~ 437 (564)
+.+..+.+++..... .++.+|||+|||+|.++..++.. ...+|+++|+|+.+++.+++|+..++. .++.+...|
T Consensus 93 ~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~----~~v~~~~~d 167 (276)
T 2b3t_A 93 PDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI----KNIHILQSD 167 (276)
T ss_dssp TTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC----CSEEEECCS
T ss_pred chHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEEcc
Confidence 445566666665432 46779999999999888877754 356999999999999999999998876 357777666
Q ss_pred cCCCccchhhhhhcCCCccEEEEeceeeCC-------------------------CChHHHHHHHHHHhhccCCCCCCCC
Q 008457 438 WGNRDHIEAIKEENNEGFEVILGTDVSYIP-------------------------EAILPLFATAKELTASSNKSLREDQ 492 (564)
Q Consensus 438 w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~-------------------------~~~~~l~~~~~~ll~~~~g~~~~~~ 492 (564)
+.+. ++.++||+|+++.+.... .....+++.+.++| +|+|
T Consensus 168 ~~~~--------~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~L-kpgG------ 232 (276)
T 2b3t_A 168 WFSA--------LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNAL-VSGG------ 232 (276)
T ss_dssp TTGG--------GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGE-EEEE------
T ss_pred hhhh--------cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhc-CCCC------
Confidence 6432 235689999976432221 23477888999999 9988
Q ss_pred CcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 493 QPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 493 ~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
.+++.... .....+.+.+.+.||...++.
T Consensus 233 --~l~~~~~~--~~~~~~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 233 --FLLLEHGW--QQGEAVRQAFILAGYHDVETC 261 (276)
T ss_dssp --EEEEECCS--SCHHHHHHHHHHTTCTTCCEE
T ss_pred --EEEEEECc--hHHHHHHHHHHHCCCcEEEEE
Confidence 77765433 233467777888999865554
No 282
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.23 E-value=1.7e-11 Score=122.29 Aligned_cols=104 Identities=18% Similarity=0.221 Sum_probs=83.3
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|+++....+ .+++++.+|+... +++.++||+|+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~~~~D~Iv 110 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDV----HLPFPKVDIII 110 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTS----CCSSSCEEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhc----cCCCCcccEEE
Confidence 56789999999999999998887 24589999999 59999988765433 5699999998654 34568999999
Q ss_pred EcccccCC-ChhHHHHHHHHHHhccCCCeEEEE
Q 008457 152 MVFVLSAV-SPEKMSLVLQNIKKVLKPTGYVLF 183 (564)
Q Consensus 152 ~~~vl~~~-~~~~~~~~l~~~~r~LkpgG~lii 183 (564)
+..+.+++ ....+..++.++.++|||||.++.
T Consensus 111 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 111 SEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 98654443 234677899999999999999974
No 283
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.23 E-value=1.9e-10 Score=114.40 Aligned_cols=170 Identities=15% Similarity=0.084 Sum_probs=107.6
Q ss_pred EEEEEeCCceEEEEEecccccccCCCccceechhH--HHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEE
Q 008457 327 MIEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESA--HLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVA 404 (564)
Q Consensus 327 ~~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~~--~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~ 404 (564)
...+..+|..+.+..... ..+|+..-... ..+++++.. ..++.+|||||||+|.++..++..++ +|++
T Consensus 111 ~~~i~e~g~~f~v~~~~~------~~tg~f~dq~~~~~~l~~~~~~---~~~~~~VLDlgcGtG~~sl~la~~ga-~V~~ 180 (332)
T 2igt_A 111 TWPLSLLGVEFLGRFTAF------RHVGVFPEQIVHWEWLKNAVET---ADRPLKVLNLFGYTGVASLVAAAAGA-EVTH 180 (332)
T ss_dssp EEEEEETTEEEEEECCSS------SCCSCCGGGHHHHHHHHHHHHH---SSSCCEEEEETCTTCHHHHHHHHTTC-EEEE
T ss_pred ceEEEECCEEEEEecCcc------ccceechHHHHHHHHHHHHHHh---cCCCCcEEEcccccCHHHHHHHHcCC-EEEE
Confidence 455666777777653222 23443321111 124444432 12567999999999988888877665 9999
Q ss_pred EcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhh--cCCCccEEEEeceeeCC----------CChHH
Q 008457 405 TDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE--NNEGFEVILGTDVSYIP----------EAILP 472 (564)
Q Consensus 405 tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~--~~~~fD~Ii~~d~~y~~----------~~~~~ 472 (564)
+|+|+.+++.+++|+..|++.. .++.+...|.. +.+..+ ...+||+|++....|.. ..+..
T Consensus 181 VD~s~~al~~a~~n~~~~gl~~--~~v~~i~~D~~-----~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ 253 (332)
T 2igt_A 181 VDASKKAIGWAKENQVLAGLEQ--APIRWICEDAM-----KFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPL 253 (332)
T ss_dssp ECSCHHHHHHHHHHHHHHTCTT--SCEEEECSCHH-----HHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCc--cceEEEECcHH-----HHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHH
Confidence 9999999999999999998741 13555544332 111111 14689999975443332 24678
Q ss_pred HHHHHHHHhhccCCCCCCCCCcEEEEEEeec-cCChhHHHHHHH----HcCCeEE
Q 008457 473 LFATAKELTASSNKSLREDQQPAFILCHIFR-QVDEPSMLSAAT----QCGFRLV 522 (564)
Q Consensus 473 l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~----~~g~~~~ 522 (564)
+++.+.++| +|+| .+++..... ......|.+.+. +.|+++.
T Consensus 254 ll~~~~~~L-kpgG--------~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 254 MLDICREIL-SPKA--------LGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp HHHHHHHTB-CTTC--------CEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred HHHHHHHhc-CcCc--------EEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 899999999 9988 655554443 334445555444 5788876
No 284
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.23 E-value=4e-11 Score=120.06 Aligned_cols=111 Identities=17% Similarity=0.211 Sum_probs=87.8
Q ss_pred HHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCcc
Q 008457 364 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 443 (564)
Q Consensus 364 l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~ 443 (564)
..+.+.......++.+|||||||+|.++..++..++.+|+++|+++ +++.+++|+..|+.. .++.+...|..+.
T Consensus 52 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~---~~i~~~~~d~~~~-- 125 (340)
T 2fyt_A 52 YRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLE---DTITLIKGKIEEV-- 125 (340)
T ss_dssp HHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCT---TTEEEEESCTTTS--
T ss_pred HHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCC---CcEEEEEeeHHHh--
Confidence 3455666656678899999999999888888777667999999996 999999999998874 5677776665432
Q ss_pred chhhhhhcCCCccEEEEece---eeCCCChHHHHHHHHHHhhccCC
Q 008457 444 IEAIKEENNEGFEVILGTDV---SYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 444 ~~~~~~~~~~~fD~Ii~~d~---~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
+++.++||+|++..+ +.+....+.+++.+.++| +|+|
T Consensus 126 -----~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~L-kpgG 165 (340)
T 2fyt_A 126 -----HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYL-AKGG 165 (340)
T ss_dssp -----CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHE-EEEE
T ss_pred -----cCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhc-CCCc
Confidence 234568999998774 445667888999999999 9988
No 285
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.23 E-value=2.1e-11 Score=112.81 Aligned_cols=148 Identities=9% Similarity=0.002 Sum_probs=96.7
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCC--------CCCCceEEE
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKP--------PFLAKLITK 434 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~--------~~~~~i~~~ 434 (564)
.|.+++... .+.++.+|||+|||+|..+..++..+ .+|+++|+|+.|++.++++...+... ....++.+.
T Consensus 10 ~l~~~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~g-~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~ 87 (203)
T 1pjz_A 10 DLQQYWSSL-NVVPGARVLVPLCGKSQDMSWLSGQG-YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIW 87 (203)
T ss_dssp HHHHHHHHH-CCCTTCEEEETTTCCSHHHHHHHHHC-CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEE
T ss_pred HHHHHHHhc-ccCCCCEEEEeCCCCcHhHHHHHHCC-CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEE
Confidence 345555432 23477899999999998887777764 58999999999999999876431000 001346666
Q ss_pred EeecCCCccchhhhhhcC-CCccEEEEeceeeCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEE-EEEeecc------
Q 008457 435 RLEWGNRDHIEAIKEENN-EGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFI-LCHIFRQ------ 504 (564)
Q Consensus 435 ~l~w~~~~~~~~~~~~~~-~~fD~Ii~~d~~y~~--~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~-~~~~~r~------ 504 (564)
..|..+.. ..+ ++||+|++..++.+. .....+++.+.++| +|+| .++ ++.....
T Consensus 88 ~~d~~~l~-------~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~L-kpgG--------~~~l~~~~~~~~~~~~~ 151 (203)
T 1pjz_A 88 CGDFFALT-------ARDIGHCAAFYDRAAMIALPADMRERYVQHLEALM-PQAC--------SGLLITLEYDQALLEGP 151 (203)
T ss_dssp EECCSSST-------HHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHS-CSEE--------EEEEEEESSCSSSSSSC
T ss_pred ECccccCC-------cccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHc-CCCc--------EEEEEEEecCccccCCC
Confidence 66554321 122 589999988777654 34567899999999 9987 633 3322211
Q ss_pred ---CChhHHHHHHHHcCCeEEEEcCCCC
Q 008457 505 ---VDEPSMLSAATQCGFRLVDKWPSKN 529 (564)
Q Consensus 505 ---~~~~~~~~~~~~~g~~~~~~~~~~~ 529 (564)
.+..++.+.+.+ ||+++.+.....
T Consensus 152 ~~~~~~~el~~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 152 PFSVPQTWLHRVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp CCCCCHHHHHHTSCS-SEEEEEEEESSC
T ss_pred CCCCCHHHHHHHhcC-CcEEEEeccccc
Confidence 133455666666 999988765543
No 286
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.23 E-value=1.4e-10 Score=108.15 Aligned_cols=154 Identities=15% Similarity=0.161 Sum_probs=107.7
Q ss_pred ccceechhHH-HHHHHHhc---CCCCCCCCeEEEeCCcccHHHHHHHhc-C-CCEEEEEcCChhHHHHHHHHHHhcCCCC
Q 008457 353 TGLMLWESAH-LMAAVLAR---NPTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTANLKPP 426 (564)
Q Consensus 353 ~G~~~W~~~~-~l~~~l~~---~~~~~~~~~vLelG~G~G~l~~~~~~~-~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~ 426 (564)
.....|+.-+ .||..++. +..+.+|.+|||||||+|.++..++.. + ..+|+++|+++++++.+++++...
T Consensus 50 ~e~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---- 125 (233)
T 4df3_A 50 EEYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---- 125 (233)
T ss_dssp EEEEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC----
T ss_pred ceeeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh----
Confidence 4578887654 56666664 345678999999999999888887765 3 459999999999999998876542
Q ss_pred CCCceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCC
Q 008457 427 FLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD 506 (564)
Q Consensus 427 ~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~ 506 (564)
.++.....+-... ... +.....+|+|+ +| +.++.....++..+.+.| ||+| .++++...+..+
T Consensus 126 --~ni~~V~~d~~~p---~~~-~~~~~~vDvVf-~d-~~~~~~~~~~l~~~~r~L-KpGG--------~lvI~ik~r~~d 188 (233)
T 4df3_A 126 --RNIFPILGDARFP---EKY-RHLVEGVDGLY-AD-VAQPEQAAIVVRNARFFL-RDGG--------YMLMAIKARSID 188 (233)
T ss_dssp --TTEEEEESCTTCG---GGG-TTTCCCEEEEE-EC-CCCTTHHHHHHHHHHHHE-EEEE--------EEEEEEECCHHH
T ss_pred --cCeeEEEEeccCc---ccc-ccccceEEEEE-Ee-ccCChhHHHHHHHHHHhc-cCCC--------EEEEEEecccCC
Confidence 2344444433322 111 23456899887 45 445566788999999999 9988 888876665422
Q ss_pred -----h---hHHHHHHHHcCCeEEEEcCC
Q 008457 507 -----E---PSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 507 -----~---~~~~~~~~~~g~~~~~~~~~ 527 (564)
. ..-.+.+.+.||++.+....
T Consensus 189 ~~~p~~~~~~~ev~~L~~~GF~l~e~i~L 217 (233)
T 4df3_A 189 VTTEPSEVYKREIKTLMDGGLEIKDVVHL 217 (233)
T ss_dssp HHTCCCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCChHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 1 12356667899999887643
No 287
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.23 E-value=2e-11 Score=116.86 Aligned_cols=101 Identities=13% Similarity=0.124 Sum_probs=76.2
Q ss_pred HHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCcc
Q 008457 364 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 443 (564)
Q Consensus 364 l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~ 443 (564)
|.++|..... .+.+|||||||+|.++..++.. ..+|+++|+|+.|++.++++ .++.+...+..+.
T Consensus 29 l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~~----------~~v~~~~~~~e~~-- 93 (257)
T 4hg2_A 29 LFRWLGEVAP--ARGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALRH----------PRVTYAVAPAEDT-- 93 (257)
T ss_dssp HHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCCC----------TTEEEEECCTTCC--
T ss_pred HHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhhc----------CCceeehhhhhhh--
Confidence 4566665432 4579999999999776666654 46899999999998865431 3566666554432
Q ss_pred chhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCC
Q 008457 444 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 444 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
++++++||+|+++.++++ -+.+.+++.+.++| +|+|
T Consensus 94 -----~~~~~sfD~v~~~~~~h~-~~~~~~~~e~~rvL-kpgG 129 (257)
T 4hg2_A 94 -----GLPPASVDVAIAAQAMHW-FDLDRFWAELRRVA-RPGA 129 (257)
T ss_dssp -----CCCSSCEEEEEECSCCTT-CCHHHHHHHHHHHE-EEEE
T ss_pred -----cccCCcccEEEEeeehhH-hhHHHHHHHHHHHc-CCCC
Confidence 456789999999998854 46899999999999 9988
No 288
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.23 E-value=2e-11 Score=116.47 Aligned_cols=108 Identities=14% Similarity=0.158 Sum_probs=86.0
Q ss_pred cCCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCC-----C
Q 008457 72 SGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQI-----S 143 (564)
Q Consensus 72 ~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~-----~ 143 (564)
...++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|+++....+ .+++++.+|+... ++ .+ +
T Consensus 76 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-l~-~l~~~~~~ 153 (247)
T 1sui_A 76 KLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV-LD-EMIKDEKN 153 (247)
T ss_dssp HHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH-HH-HHHHSGGG
T ss_pred HhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH-HH-HHHhccCC
Confidence 335678999999999999999999876 7899999999999999998865433 4789999987532 10 11 1
Q ss_pred CCceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEec
Q 008457 144 PSSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 144 ~~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
.++||+|++.... .+...+++++.++|||||++++.+.
T Consensus 154 ~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 154 HGSYDFIFVDADK-----DNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp TTCBSEEEECSCS-----TTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred CCCEEEEEEcCch-----HHHHHHHHHHHHhCCCCeEEEEecC
Confidence 5789999986542 3567899999999999999998653
No 289
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.23 E-value=1.1e-11 Score=115.14 Aligned_cols=107 Identities=10% Similarity=0.017 Sum_probs=82.6
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||+|||+|.+...+++..+.+|+++|+|+.+++.+++++..++. ++.+...|..+. ++++++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~-------~~~~~~ 89 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNF-----KLNISKGDIRKL-------PFKDES 89 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTC-----CCCEEECCTTSC-------CSCTTC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-----ceEEEECchhhC-------CCCCCc
Confidence 36789999999999664444444556999999999999999999887652 345555555432 234578
Q ss_pred ccEEEEeceeeCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 455 FEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 455 fD~Ii~~d~~y~~--~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
||+|++..++++. .....+++.+.++| +|+| .+++....
T Consensus 90 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~ 130 (209)
T 2p8j_A 90 MSFVYSYGTIFHMRKNDVKEAIDEIKRVL-KPGG--------LACINFLT 130 (209)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEEEE
T ss_pred eeEEEEcChHHhCCHHHHHHHHHHHHHHc-CCCc--------EEEEEEec
Confidence 9999999998887 68899999999999 9988 67666544
No 290
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.23 E-value=3.8e-11 Score=120.74 Aligned_cols=110 Identities=16% Similarity=0.206 Sum_probs=89.1
Q ss_pred HHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccc
Q 008457 365 AAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 444 (564)
Q Consensus 365 ~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~ 444 (564)
.+.+..+..+.++++|||+|||+|.++..++..+..+|+++|++ .+++.+++|+..|+.. +++.+...++.+.
T Consensus 55 ~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~---~~v~~~~~d~~~~--- 127 (349)
T 3q7e_A 55 RNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLD---HVVTIIKGKVEEV--- 127 (349)
T ss_dssp HHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCT---TTEEEEESCTTTC---
T ss_pred HHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCC---CcEEEEECcHHHc---
Confidence 34455555566889999999999988888887777799999999 5999999999998875 5688887777654
Q ss_pred hhhhhhcCCCccEEEEece---eeCCCChHHHHHHHHHHhhccCC
Q 008457 445 EAIKEENNEGFEVILGTDV---SYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 445 ~~~~~~~~~~fD~Ii~~d~---~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
+++.++||+|++..+ +.+....+.+++.+.++| +|+|
T Consensus 128 ----~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~L-kpgG 167 (349)
T 3q7e_A 128 ----ELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWL-APDG 167 (349)
T ss_dssp ----CCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHE-EEEE
T ss_pred ----cCCCCceEEEEEccccccccCchhHHHHHHHHHHhC-CCCC
Confidence 234579999998665 345678999999999999 9988
No 291
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.22 E-value=2.6e-11 Score=113.40 Aligned_cols=121 Identities=14% Similarity=0.107 Sum_probs=92.0
Q ss_pred chhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEee
Q 008457 358 WESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 437 (564)
Q Consensus 358 W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~ 437 (564)
|-....+..++.......++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++..+ +++.+...|
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d 105 (216)
T 3ofk_A 33 PFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKRW------SHISWAATD 105 (216)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTTC------SSEEEEECC
T ss_pred HhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcccC------CCeEEEEcc
Confidence 43444455555544444577899999999998777777664 58999999999999999987653 357777776
Q ss_pred cCCCccchhhhhhcCCCccEEEEeceeeCCCCh---HHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 438 WGNRDHIEAIKEENNEGFEVILGTDVSYIPEAI---LPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 438 w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~---~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
..+.. ++++||+|+++.++++..+. ..+++.+.++| +|+| .++++...
T Consensus 106 ~~~~~--------~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~ 156 (216)
T 3ofk_A 106 ILQFS--------TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKML-APGG--------HLVFGSAR 156 (216)
T ss_dssp TTTCC--------CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTE-EEEE--------EEEEEEEC
T ss_pred hhhCC--------CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHc-CCCC--------EEEEEecC
Confidence 65431 35789999999999988776 46699999999 9988 78876543
No 292
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.22 E-value=1.4e-11 Score=128.50 Aligned_cols=108 Identities=22% Similarity=0.237 Sum_probs=87.5
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCc
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSS 146 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~ 146 (564)
+.+...++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++....+ .+++++.+|+.... ++ ++
T Consensus 152 ~~l~~~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~----~~-~~ 224 (480)
T 3b3j_A 152 QNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS----LP-EQ 224 (480)
T ss_dssp HTGGGTTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC----CS-SC
T ss_pred HhhhhcCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc----cC-CC
Confidence 3344457889999999999999988875 467999999998 9999988765433 57999999986532 22 58
Q ss_pred eeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEE
Q 008457 147 IDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLF 183 (564)
Q Consensus 147 fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii 183 (564)
||+|+++.+++|+..++....+.++.++|||||.+++
T Consensus 225 fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 225 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred eEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 9999998887877656777788899999999999985
No 293
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.22 E-value=1.4e-10 Score=112.98 Aligned_cols=109 Identities=20% Similarity=0.220 Sum_probs=86.3
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc-----CCCeeEEEecCCcccccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-----ETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++.... ..+++++.+|+..... ...++||
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~---~~~~~fD 153 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE---NVTNTYD 153 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH---HCCSCEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHH---hCCCCce
Confidence 4678999999999999999988766789999999999999999986532 4678999999854211 1257899
Q ss_pred EEEEcccccCCChhHH--HHHHHHHHhccCCCeEEEEEe
Q 008457 149 IVTMVFVLSAVSPEKM--SLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 149 ~V~~~~vl~~~~~~~~--~~~l~~~~r~LkpgG~lii~~ 185 (564)
+|++....++.+.... ..++++++++|+|||.+++..
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 9999654443332333 689999999999999999864
No 294
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.22 E-value=6e-11 Score=119.76 Aligned_cols=116 Identities=16% Similarity=0.061 Sum_probs=90.3
Q ss_pred HhhhccCCCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCC
Q 008457 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISP 144 (564)
Q Consensus 67 ~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~ 144 (564)
+..+....++.+|||+|||+|.++..++... +..+++|+|+++.+++.|+++....+ .++++.++|+.... .+.
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~----~~~ 270 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP----RFF 270 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG----GTC
T ss_pred HHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc----ccc
Confidence 3344455778999999999999999999985 67899999999999999999876444 27999999986542 245
Q ss_pred CceeEEEEcccccCCC------hhHHHHHHHHHHhccCCCeEEEEEec
Q 008457 145 SSIDIVTMVFVLSAVS------PEKMSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 145 ~~fD~V~~~~vl~~~~------~~~~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
+.||+|+++-.+.... ......+++++.++|||||.+++.+.
T Consensus 271 ~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 271 PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 6799999976543221 12236799999999999999998643
No 295
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.22 E-value=5.6e-11 Score=112.00 Aligned_cols=129 Identities=15% Similarity=0.117 Sum_probs=98.7
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||+|||+|.++..++.. +.+|+++|+++.+++.++++.. .+...|..+.. .++++++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~~-----------~~~~~d~~~~~-----~~~~~~~ 93 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKLD-----------HVVLGDIETMD-----MPYEEEQ 93 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTSS-----------EEEESCTTTCC-----CCSCTTC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhCC-----------cEEEcchhhcC-----CCCCCCc
Confidence 47789999999999888877777 5899999999999998887531 23333333210 1234578
Q ss_pred ccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee----------------------------ccCC
Q 008457 455 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF----------------------------RQVD 506 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~----------------------------r~~~ 506 (564)
||+|++++++++..+...+++.+.++| +|+| .++++.+. +..+
T Consensus 94 fD~v~~~~~l~~~~~~~~~l~~~~~~L-~~gG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFDPWAVIEKVKPYI-KQNG--------VILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFT 164 (230)
T ss_dssp EEEEEEESCGGGSSCHHHHHHHTGGGE-EEEE--------EEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCC
T ss_pred cCEEEECChhhhcCCHHHHHHHHHHHc-CCCC--------EEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEec
Confidence 999999999999999999999999999 9988 77776543 1123
Q ss_pred hhHHHHHHHHcCCeEEEEcCCCC
Q 008457 507 EPSMLSAATQCGFRLVDKWPSKN 529 (564)
Q Consensus 507 ~~~~~~~~~~~g~~~~~~~~~~~ 529 (564)
...+.+.+.++||++.++.....
T Consensus 165 ~~~~~~~l~~~Gf~~~~~~~~~~ 187 (230)
T 3cc8_A 165 FNEMLRMFLKAGYSISKVDRVYV 187 (230)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCeEEEEEeccc
Confidence 45778888999999998875533
No 296
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.22 E-value=2.8e-11 Score=111.85 Aligned_cols=109 Identities=6% Similarity=0.010 Sum_probs=83.8
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||||||+|.++..++..+..+|+++|+|+.+++.+++|+..++. .++.+...|+.+ ..+...++|
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~----~~v~~~~~D~~~------~~~~~~~~f 123 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA----GNARVVNSNAMS------FLAQKGTPH 123 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC----CSEEEECSCHHH------HHSSCCCCE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC----CcEEEEECCHHH------HHhhcCCCC
Confidence 6789999999999888877777777999999999999999999998875 346655443321 112235689
Q ss_pred cEEEEeceeeCCCChHHHHHHHHH--HhhccCCCCCCCCCcEEEEEEeecc
Q 008457 456 EVILGTDVSYIPEAILPLFATAKE--LTASSNKSLREDQQPAFILCHIFRQ 504 (564)
Q Consensus 456 D~Ii~~d~~y~~~~~~~l~~~~~~--ll~~~~g~~~~~~~~~~~~~~~~r~ 504 (564)
|+|++.. .|.......+++.+.+ +| +|+| .++++.....
T Consensus 124 D~V~~~~-p~~~~~~~~~l~~l~~~~~L-~pgG--------~l~i~~~~~~ 164 (202)
T 2fpo_A 124 NIVFVDP-PFRRGLLEETINLLEDNGWL-ADEA--------LIYVESEVEN 164 (202)
T ss_dssp EEEEECC-SSSTTTHHHHHHHHHHTTCE-EEEE--------EEEEEEEGGG
T ss_pred CEEEECC-CCCCCcHHHHHHHHHhcCcc-CCCc--------EEEEEECCCc
Confidence 9998654 4778888889999977 49 9987 7877766554
No 297
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.22 E-value=2.1e-10 Score=108.40 Aligned_cols=138 Identities=20% Similarity=0.171 Sum_probs=93.5
Q ss_pred hcCCCCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhh
Q 008457 369 ARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAI 447 (564)
Q Consensus 369 ~~~~~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~ 447 (564)
.....+.++.+|||||||+|.++..++... ..+|+++|+++.+++.+++|+..+ .++.+...|..+. ...
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~------~~v~~~~~d~~~~---~~~ 137 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER------ENIIPILGDANKP---QEY 137 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC------TTEEEEECCTTCG---GGG
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC------CCeEEEECCCCCc---ccc
Confidence 344445578899999999998888877763 479999999999999999997654 3466555554431 110
Q ss_pred hhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCC-h-------hHHHHHHHHcCC
Q 008457 448 KEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD-E-------PSMLSAATQCGF 519 (564)
Q Consensus 448 ~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~-~-------~~~~~~~~~~g~ 519 (564)
.++. ++||+|+ .|+ ........+++.+.++| +|+| .++++...+... . ..-+..+.+.||
T Consensus 138 ~~~~-~~~D~v~-~~~-~~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~l~~l~~~Gf 205 (230)
T 1fbn_A 138 ANIV-EKVDVIY-EDV-AQPNQAEILIKNAKWFL-KKGG--------YGMIAIKARSIDVTKDPKEIFKEQKEILEAGGF 205 (230)
T ss_dssp TTTS-CCEEEEE-ECC-CSTTHHHHHHHHHHHHE-EEEE--------EEEEEEEGGGTCSSSCHHHHHHHHHHHHHHHTE
T ss_pred cccC-ccEEEEE-Eec-CChhHHHHHHHHHHHhC-CCCc--------EEEEEEecCCCCCCCCHHHhhHHHHHHHHHCCC
Confidence 1223 6899998 232 22333478899999999 9988 777764433211 1 122336778899
Q ss_pred eEEEEcCC
Q 008457 520 RLVDKWPS 527 (564)
Q Consensus 520 ~~~~~~~~ 527 (564)
++.++...
T Consensus 206 ~~~~~~~~ 213 (230)
T 1fbn_A 206 KIVDEVDI 213 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcc
Confidence 99887644
No 298
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.22 E-value=8e-11 Score=114.44 Aligned_cols=134 Identities=10% Similarity=0.118 Sum_probs=99.4
Q ss_pred HHhcCCCCCCCCeEEEeCCcccHHHHHHHhc--CCCEEEEEcCChhHHHHHHHHHHhc-CCCCCCCceEEEEeecCCCcc
Q 008457 367 VLARNPTIVAGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTAN-LKPPFLAKLITKRLEWGNRDH 443 (564)
Q Consensus 367 ~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~--~~~~v~~tD~~~~~l~~~~~n~~~n-~~~~~~~~i~~~~l~w~~~~~ 443 (564)
++.......++.+|||+|||+|.++..++.. ...+|+++|+++.+++.+++|+..+ +. .++.+...|+.+.
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~----~~v~~~~~d~~~~-- 174 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI----GNVRTSRSDIADF-- 174 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC----TTEEEECSCTTTC--
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC----CcEEEEECchhcc--
Confidence 4444445567889999999999888877765 2579999999999999999999887 63 4577766665431
Q ss_pred chhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEE
Q 008457 444 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVD 523 (564)
Q Consensus 444 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~ 523 (564)
++.++||+|++ +......+++.+.++| +|+| .++++..... ....+.+.+.+.||...+
T Consensus 175 ------~~~~~fD~Vi~-----~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~~~~-~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 175 ------ISDQMYDAVIA-----DIPDPWNHVQKIASMM-KPGS--------VATFYLPNFD-QSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp ------CCSCCEEEEEE-----CCSCGGGSHHHHHHTE-EEEE--------EEEEEESSHH-HHHHHHHHSGGGTEEEEE
T ss_pred ------CcCCCccEEEE-----cCcCHHHHHHHHHHHc-CCCC--------EEEEEeCCHH-HHHHHHHHHHHCCCeEEE
Confidence 23468999996 4456678999999999 9988 7777765442 223567778889999998
Q ss_pred EcCC
Q 008457 524 KWPS 527 (564)
Q Consensus 524 ~~~~ 527 (564)
+.+.
T Consensus 234 ~~~~ 237 (275)
T 1yb2_A 234 TVEL 237 (275)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8743
No 299
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.21 E-value=4.6e-12 Score=120.58 Aligned_cols=108 Identities=15% Similarity=0.154 Sum_probs=86.4
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCC----CCC
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQI----SPS 145 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~----~~~ 145 (564)
..++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|+++....+ .+++++++|+..... .+ ..+
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~--~~~~~~~~~ 135 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLH--SLLNEGGEH 135 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHH--HHHHHHCSS
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH--HHhhccCCC
Confidence 35678999999999999999999865 7899999999999999988765433 579999999853211 11 147
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
+||+|++... ......+++++.++|||||++++.+..
T Consensus 136 ~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 136 QFDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp CEEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred CEeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 8999998654 246677999999999999999997554
No 300
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.21 E-value=2.6e-12 Score=121.93 Aligned_cols=145 Identities=20% Similarity=0.255 Sum_probs=98.6
Q ss_pred ceechhHH--HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceE
Q 008457 355 LMLWESAH--LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLI 432 (564)
Q Consensus 355 ~~~W~~~~--~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~ 432 (564)
+..|+..+ .+++.+. .+|.+|||||||+|..+..++...+.+|+++|+++.+++.++++...++. .+.
T Consensus 42 m~~we~~~m~~~a~~~~-----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~-----~~~ 111 (236)
T 3orh_A 42 MERWETPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH-----KVI 111 (236)
T ss_dssp EEGGGHHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS-----EEE
T ss_pred HHHHHHHHHHHHHHhhc-----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC-----ceE
Confidence 45687654 3555442 37889999999999777777666667999999999999999999876553 456
Q ss_pred EEEeecCCCccchhhhhhcCCCccEEEEecee------eCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec---
Q 008457 433 TKRLEWGNRDHIEAIKEENNEGFEVILGTDVS------YIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR--- 503 (564)
Q Consensus 433 ~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~------y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r--- 503 (564)
+...+|... ...+++++||.|+ .|+. .+..+.+.+++.+.++| ||+| +++++....
T Consensus 112 ~~~~~a~~~-----~~~~~~~~FD~i~-~D~~~~~~~~~~~~~~~~~~~e~~rvL-kPGG--------~l~f~~~~~~~~ 176 (236)
T 3orh_A 112 PLKGLWEDV-----APTLPDGHFDGIL-YDTYPLSEETWHTHQFNFIKNHAFRLL-KPGG--------VLTYCNLTSWGE 176 (236)
T ss_dssp EEESCHHHH-----GGGSCTTCEEEEE-ECCCCCBGGGTTTHHHHHHHHTHHHHE-EEEE--------EEEECCHHHHHH
T ss_pred EEeehHHhh-----cccccccCCceEE-Eeeeecccchhhhcchhhhhhhhhhee-CCCC--------EEEEEecCCchh
Confidence 655555321 1245677899986 3443 33445778999999999 9988 777654210
Q ss_pred --c--CC------hhHHHHHHHHcCCeEEEE
Q 008457 504 --Q--VD------EPSMLSAATQCGFRLVDK 524 (564)
Q Consensus 504 --~--~~------~~~~~~~~~~~g~~~~~~ 524 (564)
. .. .......+.++||+++.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 177 LMKSKYSDITIMFEETQVPALLEAGFRRENI 207 (236)
T ss_dssp HTTTTCSCHHHHHHHHTHHHHHHHTCCGGGE
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHcCCeEEEE
Confidence 0 01 112345567889986544
No 301
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.21 E-value=2e-11 Score=121.24 Aligned_cols=109 Identities=18% Similarity=0.224 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccc-----cCCCeeEEEecCCcccccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
.++.+|||||||+|..+..+++..+..+|+++|+|+.+++.|+++... ...+++++++|+... + ..+++++||
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~-l-~~~~~~~fD 196 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF-L-KNAAEGSYD 196 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH-H-HTSCTTCEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH-H-HhccCCCcc
Confidence 567899999999999999999876678999999999999999987643 236799999997542 1 122457899
Q ss_pred EEEEcccccCCChhH--HHHHHHHHHhccCCCeEEEEE
Q 008457 149 IVTMVFVLSAVSPEK--MSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 149 ~V~~~~vl~~~~~~~--~~~~l~~~~r~LkpgG~lii~ 184 (564)
+|++.....+-+... ...++++++++|+|||++++.
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 999965422211122 468999999999999999985
No 302
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.21 E-value=4.7e-11 Score=114.74 Aligned_cols=136 Identities=12% Similarity=0.042 Sum_probs=102.6
Q ss_pred HHhcCCCCCCCCeEEEeCCcccHHHHHHHhc-C-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccc
Q 008457 367 VLARNPTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 444 (564)
Q Consensus 367 ~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~-~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~ 444 (564)
++.......++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++|+..++.. +++.+...|+.+
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~---- 156 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD---DRVTIKLKDIYE---- 156 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT---TTEEEECSCGGG----
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC---CceEEEECchhh----
Confidence 3433344567889999999999888888776 4 579999999999999999999988764 457777665542
Q ss_pred hhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcC--CeEE
Q 008457 445 EAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCG--FRLV 522 (564)
Q Consensus 445 ~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g--~~~~ 522 (564)
.++.++||+|++ +......+++.+.++| +|+| .+++...... ....+.+.+.+.| |...
T Consensus 157 ----~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L-~~gG--------~l~~~~~~~~-~~~~~~~~l~~~g~~f~~~ 217 (255)
T 3mb5_A 157 ----GIEEENVDHVIL-----DLPQPERVVEHAAKAL-KPGG--------FFVAYTPCSN-QVMRLHEKLREFKDYFMKP 217 (255)
T ss_dssp ----CCCCCSEEEEEE-----CSSCGGGGHHHHHHHE-EEEE--------EEEEEESSHH-HHHHHHHHHHHTGGGBSCC
T ss_pred ----ccCCCCcCEEEE-----CCCCHHHHHHHHHHHc-CCCC--------EEEEEECCHH-HHHHHHHHHHHcCCCcccc
Confidence 134568999986 3456678899999999 9987 6666544332 2346788888999 9888
Q ss_pred EEcCCC
Q 008457 523 DKWPSK 528 (564)
Q Consensus 523 ~~~~~~ 528 (564)
++++..
T Consensus 218 ~~~e~~ 223 (255)
T 3mb5_A 218 RTINVL 223 (255)
T ss_dssp EEECCC
T ss_pred EEEEEe
Confidence 888663
No 303
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.21 E-value=2.2e-11 Score=113.40 Aligned_cols=105 Identities=18% Similarity=0.061 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
.++.+|||||||+|..+..+++..+ +.+|+++|+|+.+++.|+++....+ .+++++++|.... + +..++ ||+|
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--~~~~~-fD~v 130 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI-A--AGQRD-IDIL 130 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH-H--TTCCS-EEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH-h--ccCCC-CCEE
Confidence 4678999999999999999998876 7899999999999999998765333 4689999987532 1 22345 9999
Q ss_pred EEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 151 TMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 151 ~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
++... ..+...+++++.++|||||.+++.+..
T Consensus 131 ~~~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 131 FMDCD-----VFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp EEETT-----TSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred EEcCC-----hhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 98743 135678999999999999999986543
No 304
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.20 E-value=1.8e-10 Score=113.97 Aligned_cols=109 Identities=20% Similarity=0.234 Sum_probs=84.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc-----CCCeeEEEecCCcccccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-----ETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
.++.+|||||||+|..+..+++..+..+|+++|+|+.+++.|+++.... ..+++++++|+.... +..+++||
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l---~~~~~~fD 191 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFL---ENVTNTYD 191 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHH---HHCCSCEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHH---hhcCCCce
Confidence 4678999999999999999988766789999999999999999886531 357999999975421 11357899
Q ss_pred EEEEcccccCCChhHH--HHHHHHHHhccCCCeEEEEEe
Q 008457 149 IVTMVFVLSAVSPEKM--SLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 149 ~V~~~~vl~~~~~~~~--~~~l~~~~r~LkpgG~lii~~ 185 (564)
+|++...-..-+.... ..+++++++.|+|||++++..
T Consensus 192 vIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 192 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999653222111222 689999999999999999864
No 305
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.20 E-value=6.1e-11 Score=112.76 Aligned_cols=115 Identities=21% Similarity=0.224 Sum_probs=88.4
Q ss_pred hhhccCCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCccc--c----
Q 008457 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDD--L---- 138 (564)
Q Consensus 68 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~--~---- 138 (564)
..++...++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|+++....+ .++.+.++|+.... +
T Consensus 53 ~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~ 132 (239)
T 2hnk_A 53 NILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSK 132 (239)
T ss_dssp HHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCS
T ss_pred HHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhc
Confidence 3333345788999999999999999999876 6899999999999999998865433 35889998875321 1
Q ss_pred -----cCCCCC--CceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 139 -----SRQISP--SSIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 139 -----~~~~~~--~~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
...+++ ++||+|++.... .....+++++.++|+|||++++.+..
T Consensus 133 ~~~~~~~~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 133 SAPSWASDFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp SCCGGGTTTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccccccccccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 112333 789999997543 35568899999999999999987543
No 306
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.20 E-value=1.2e-10 Score=114.71 Aligned_cols=105 Identities=10% Similarity=0.101 Sum_probs=83.2
Q ss_pred CCCeEEEeCCcccHHHHHHHh--cCCCEEEEEcCChhHHHHHHHHHHhc-CCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 376 AGKKVLELGCGCGGICSMVAA--GSADLVVATDGDSIALDLLAQNVTAN-LKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~--~~~~~v~~tD~~~~~l~~~~~n~~~n-~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
++.+|||||||+|.++..++. ....+|+++|+++.+++.+++++..+ +. ..++.+...|..+.... ....+..
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~~v~~~~~d~~~~~~~-~~~~~~~ 111 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT---YKNVSFKISSSDDFKFL-GADSVDK 111 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C---CTTEEEEECCTTCCGGG-CTTTTTS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC---CCceEEEEcCHHhCCcc-ccccccC
Confidence 788999999999988777775 35779999999999999999999886 22 25688888777653210 0001123
Q ss_pred CCccEEEEeceeeCCCChHHHHHHHHHHhhccCC
Q 008457 453 EGFEVILGTDVSYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
++||+|+++.++++. +...+++.+.++| +|+|
T Consensus 112 ~~fD~V~~~~~l~~~-~~~~~l~~~~~~L-kpgG 143 (299)
T 3g5t_A 112 QKIDMITAVECAHWF-DFEKFQRSAYANL-RKDG 143 (299)
T ss_dssp SCEEEEEEESCGGGS-CHHHHHHHHHHHE-EEEE
T ss_pred CCeeEEeHhhHHHHh-CHHHHHHHHHHhc-CCCc
Confidence 799999999999999 9999999999999 9987
No 307
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.20 E-value=1.6e-10 Score=112.05 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccc-----cCCCeeEEEecCCcccccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
..+.+|||||||+|.++..+++..+..+|+++|+++.+++.|+++... ...+++++.+|+... + +..+++||
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~-l--~~~~~~fD 150 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH-I--AKSENQYD 150 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH-H--HTCCSCEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH-H--hhCCCCee
Confidence 467899999999999999998775568999999999999999987632 246899999998542 1 11357899
Q ss_pred EEEEcccccCCChh--HHHHHHHHHHhccCCCeEEEEEe
Q 008457 149 IVTMVFVLSAVSPE--KMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 149 ~V~~~~vl~~~~~~--~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
+|++....++.+.. ....++++++++|+|||++++..
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99996544322211 12579999999999999999864
No 308
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.20 E-value=2.9e-11 Score=112.52 Aligned_cols=141 Identities=15% Similarity=0.190 Sum_probs=105.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||||||+|-++..++...|..+|+++|+++.|++.++.+....+.+..+...|.... .+.+.||+|+++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~-----~p~~~~DvaL~l 205 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLED-----RLDEPADVTLLL 205 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTS-----CCCSCCSEEEET
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeeccc-----CCCCCcchHHHH
Confidence 458899999999999999998888899999999999999999999876677788888888643 367889999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhCCC
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKENGF 233 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 233 (564)
-+++|+..+.....+ ++...|+|+|.++-...-. +.... .+... .-.+.|...+.+.|.
T Consensus 206 kti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ks-------l~Grs-----------~gm~~--~Y~~~~e~~~~~~g~ 264 (281)
T 3lcv_B 206 KTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKS-------LGQRS-----------KGMFQ--NYSQSFESQARERSC 264 (281)
T ss_dssp TCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------------------------CHHH--HHHHHHHHHHHHHTC
T ss_pred HHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchh-------hcCCC-----------cchhh--HHHHHHHHHHHhcCC
Confidence 999999544444555 9999999999988653310 00000 11111 126778888888898
Q ss_pred cEEEeee
Q 008457 234 DVEELGL 240 (564)
Q Consensus 234 ~~~~~~~ 240 (564)
.+.+...
T Consensus 265 ~~~~~~~ 271 (281)
T 3lcv_B 265 RIQRLEI 271 (281)
T ss_dssp CEEEEEE
T ss_pred ceeeeee
Confidence 6655544
No 309
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.20 E-value=2.3e-11 Score=119.25 Aligned_cols=143 Identities=11% Similarity=0.072 Sum_probs=95.0
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCC-----------CC--------------
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPF-----------LA-------------- 429 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~-----------~~-------------- 429 (564)
.++.+|||||||+|.+..+++...+.+|+++|+|+.+++.+++++..+..... .+
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 37789999999999643333333466999999999999999987653210000 00
Q ss_pred -ceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeC----CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee--
Q 008457 430 -KLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI----PEAILPLFATAKELTASSNKSLREDQQPAFILCHIF-- 502 (564)
Q Consensus 430 -~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~----~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~-- 502 (564)
.+.+...|..+...+.. ..+++++||+|+++.++++ ..+...+++.+.++| +|+| .++++...
T Consensus 150 ~~~~~~~~D~~~~~~~~~-~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~L-kpGG--------~l~~~~~~~~ 219 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGA-GSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLL-RPGG--------HLLLIGALEE 219 (289)
T ss_dssp HEEEEECCCTTSSSTTCS-SCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTE-EEEE--------EEEEEEEESC
T ss_pred hhceEEecccCCCCCccc-cccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhc-CCCC--------EEEEEEecCc
Confidence 12233333332111000 0123467999999999887 557899999999999 9988 77765321
Q ss_pred ------------ccCChhHHHHHHHHcCCeEEEEcCC
Q 008457 503 ------------RQVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 503 ------------r~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
+..+...+.+.+.++||+++++...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 220 SWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp CEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 2234567788889999999988643
No 310
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.20 E-value=4.9e-11 Score=115.55 Aligned_cols=105 Identities=20% Similarity=0.269 Sum_probs=86.6
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
..++.+|||+|||+|.++..+++..+..+|+|+|+++.+++.|+++....+ .++.++++|+... +. .++||+|+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~----~~-~~~~D~Vi 191 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV----EL-KDVADRVI 191 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC----CC-TTCEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc----Cc-cCCceEEE
Confidence 367889999999999999999998767799999999999999998876444 4688999998653 11 56899999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCC
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
+.... ....++.++.+.|+|||.++++++..
T Consensus 192 ~d~p~------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 192 MGYVH------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ECCcc------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 97543 34568999999999999999986543
No 311
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.20 E-value=2.1e-11 Score=115.37 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCC--Ccee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISP--SSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~--~~fD 148 (564)
.++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|+++....+ .++++..+|+.......+..+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 4678999999999999999998865 6899999999999999998764333 468999988743211111223 7899
Q ss_pred EEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 149 IVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 149 ~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
+|++... ..+...+++++.++|+|||.+++.+..
T Consensus 151 ~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 151 LIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 9998654 246678999999999999999987544
No 312
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.19 E-value=9.8e-11 Score=115.36 Aligned_cols=136 Identities=14% Similarity=0.145 Sum_probs=99.0
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
.+.+|||||||+|.++..++.. +.+|+++|+++.+++.+++++..++... ..++.+...|..+. +. +++|
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~v~~~~~d~~~~-------~~-~~~f 151 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADV-RDRCTLVQGDMSAF-------AL-DKRF 151 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHH-HTTEEEEECBTTBC-------CC-SCCE
T ss_pred CCCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhccccc-ccceEEEeCchhcC-------Cc-CCCc
Confidence 3459999999999887777776 4689999999999999999988754210 03577777776543 11 4689
Q ss_pred cEEEEe-ceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee------------------------------
Q 008457 456 EVILGT-DVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIF------------------------------ 502 (564)
Q Consensus 456 D~Ii~~-d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~------------------------------ 502 (564)
|+|+++ .++.+.. ....+++.+.++| +|+| .+++....
T Consensus 152 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 222 (299)
T 3g2m_A 152 GTVVISSGSINELDEADRRGLYASVREHL-EPGG--------KFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHL 222 (299)
T ss_dssp EEEEECHHHHTTSCHHHHHHHHHHHHHHE-EEEE--------EEEEEEECCHHHHSCCCCC-------------CCEEEE
T ss_pred CEEEECCcccccCCHHHHHHHHHHHHHHc-CCCc--------EEEEEeecCccccccchhccceeecCCCcEEEEEEEEe
Confidence 998866 4444333 4689999999999 9988 55554322
Q ss_pred ---------------------------ccCChhHHHHHHHHcCCeEEEEcCCCCC
Q 008457 503 ---------------------------RQVDEPSMLSAATQCGFRLVDKWPSKNS 530 (564)
Q Consensus 503 ---------------------------r~~~~~~~~~~~~~~g~~~~~~~~~~~~ 530 (564)
|..+...+.+.++++||+++++.....+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~ 277 (299)
T 3g2m_A 223 PAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASG 277 (299)
T ss_dssp EEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTT
T ss_pred ccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCC
Confidence 1225567889999999999999755433
No 313
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.19 E-value=4.4e-11 Score=116.48 Aligned_cols=103 Identities=19% Similarity=0.247 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCce---e
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSI---D 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~f---D 148 (564)
.++.+|||+|||+|.++..++.. |+.+|+|+|+|+.+++.|+++....+ .+++++++|+... + + ++| |
T Consensus 122 ~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~----~-~~f~~~D 194 (284)
T 1nv8_A 122 YGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-F----K-EKFASIE 194 (284)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-G----G-GGTTTCC
T ss_pred cCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-c----c-cccCCCC
Confidence 36689999999999999999999 88999999999999999998875443 3599999998652 1 2 478 9
Q ss_pred EEEEc------------ccccCCCh------hHHHHHHHHHH-hccCCCeEEEEE
Q 008457 149 IVTMV------------FVLSAVSP------EKMSLVLQNIK-KVLKPTGYVLFR 184 (564)
Q Consensus 149 ~V~~~------------~vl~~~~~------~~~~~~l~~~~-r~LkpgG~lii~ 184 (564)
+|+++ .+. |-|. .+...+++++. +.|+|||.+++.
T Consensus 195 ~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 195 MILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp EEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred EEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 99997 222 3321 11226899999 999999999984
No 314
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.19 E-value=9.1e-11 Score=110.54 Aligned_cols=117 Identities=18% Similarity=0.210 Sum_probs=91.0
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc-CCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN-NEG 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~-~~~ 454 (564)
++.+|||+|||+|.++..++.. +.+|+++|+++.+++.+++| . .++.+...|+.+.. ++. +++
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-----~----~~~~~~~~d~~~~~------~~~~~~~ 111 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN-----A----PHADVYEWNGKGEL------PAGLGAP 111 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH-----C----TTSEEEECCSCSSC------CTTCCCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh-----C----CCceEEEcchhhcc------CCcCCCC
Confidence 6789999999999877777766 56999999999999999998 1 34677777764321 233 579
Q ss_pred ccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 455 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
||+|+++ .....+++.+.++| +|+| .++ ..........+.+.+.+.||.+.++.
T Consensus 112 fD~v~~~------~~~~~~l~~~~~~L-kpgG--------~l~--~~~~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 112 FGLIVSR------RGPTSVILRLPELA-APDA--------HFL--YVGPRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp EEEEEEE------SCCSGGGGGHHHHE-EEEE--------EEE--EEESSSCCTHHHHHHHHTTCEEEEEE
T ss_pred EEEEEeC------CCHHHHHHHHHHHc-CCCc--------EEE--EeCCcCCHHHHHHHHHHCCCeEEEEE
Confidence 9999987 46778899999999 9988 666 33333444578888999999998875
No 315
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.18 E-value=2.1e-10 Score=102.87 Aligned_cols=133 Identities=18% Similarity=0.066 Sum_probs=90.6
Q ss_pred chhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEee
Q 008457 358 WESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 437 (564)
Q Consensus 358 W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~ 437 (564)
.+.+..|.+++.... .++.+|||+|||+|.++..++..+ +|+++|+|+.+++. . .++.+...|
T Consensus 7 ~~~~~~l~~~l~~~~--~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~------~-------~~~~~~~~d 69 (170)
T 3q87_B 7 GEDTYTLMDALEREG--LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES------H-------RGGNLVRAD 69 (170)
T ss_dssp CHHHHHHHHHHHHHT--CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT------C-------SSSCEEECS
T ss_pred CccHHHHHHHHHhhc--CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc------c-------cCCeEEECC
Confidence 455666777764421 356799999999998777777666 99999999999987 1 234555555
Q ss_pred cCCCccchhhhhhcCCCccEEEEeceeeCCCC---------hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChh
Q 008457 438 WGNRDHIEAIKEENNEGFEVILGTDVSYIPEA---------ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEP 508 (564)
Q Consensus 438 w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~---------~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~ 508 (564)
+.+. +.+++||+|+++.+.+.... ...+++.+.+.+ |+| .+++..... ....
T Consensus 70 ~~~~--------~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--pgG--------~l~~~~~~~-~~~~ 130 (170)
T 3q87_B 70 LLCS--------INQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV--TVG--------MLYLLVIEA-NRPK 130 (170)
T ss_dssp TTTT--------BCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC--CSS--------EEEEEEEGG-GCHH
T ss_pred hhhh--------cccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC--CCC--------EEEEEEecC-CCHH
Confidence 5432 23368999998765553222 245566666666 666 777765433 3344
Q ss_pred HHHHHHHHcCCeEEEEcC
Q 008457 509 SMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 509 ~~~~~~~~~g~~~~~~~~ 526 (564)
.+.+.+.+.||++..+..
T Consensus 131 ~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 131 EVLARLEERGYGTRILKV 148 (170)
T ss_dssp HHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHCCCcEEEEEe
Confidence 678888899999998873
No 316
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.18 E-value=1.3e-11 Score=117.20 Aligned_cols=127 Identities=20% Similarity=0.197 Sum_probs=87.1
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||||||+|.++..++..+..+|+++|+|+.+++.++++...++ .++.+...|+.+. +.++++++|
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-----~~v~~~~~d~~~~-----~~~~~~~~f 129 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-----HKVIPLKGLWEDV-----APTLPDGHF 129 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS-----SEEEEEESCHHHH-----GGGSCTTCE
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC-----CCeEEEecCHHHh-----hcccCCCce
Confidence 677999999999988777766566699999999999999999887654 3455555544321 123556799
Q ss_pred cEEEE-eceee----CCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc--------CC-----hhHHHHHHHHc
Q 008457 456 EVILG-TDVSY----IPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------VD-----EPSMLSAATQC 517 (564)
Q Consensus 456 D~Ii~-~d~~y----~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~--------~~-----~~~~~~~~~~~ 517 (564)
|+|++ .-.+. +......+++.+.++| +|+| .++++..... .. .......+.++
T Consensus 130 D~V~~d~~~~~~~~~~~~~~~~~l~~~~r~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 200 (236)
T 1zx0_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLL-KPGG--------VLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEA 200 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHE-EEEE--------EEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHT
T ss_pred EEEEECCcccchhhhhhhhHHHHHHHHHHhc-CCCe--------EEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHC
Confidence 99997 33321 1223447799999999 9988 7766533211 00 02334667789
Q ss_pred CCeE
Q 008457 518 GFRL 521 (564)
Q Consensus 518 g~~~ 521 (564)
||.+
T Consensus 201 GF~~ 204 (236)
T 1zx0_A 201 GFRR 204 (236)
T ss_dssp TCCG
T ss_pred CCCC
Confidence 9984
No 317
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.18 E-value=7.6e-11 Score=119.74 Aligned_cols=111 Identities=18% Similarity=0.142 Sum_probs=89.1
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCc
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 442 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~ 442 (564)
...+++.......++++|||||||+|.++..++..++++|+++|++ .+++.+++++..|++. +++.+...|..+.
T Consensus 50 ~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~- 124 (376)
T 3r0q_C 50 AYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLD---HIVEVIEGSVEDI- 124 (376)
T ss_dssp HHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCT---TTEEEEESCGGGC-
T ss_pred HHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCC---CeEEEEECchhhc-
Confidence 3456676677778999999999999988888887777799999999 9999999999999875 5677777666432
Q ss_pred cchhhhhhcCCCccEEEEeceeeC---CCChHHHHHHHHHHhhccCC
Q 008457 443 HIEAIKEENNEGFEVILGTDVSYI---PEAILPLFATAKELTASSNK 486 (564)
Q Consensus 443 ~~~~~~~~~~~~fD~Ii~~d~~y~---~~~~~~l~~~~~~ll~~~~g 486 (564)
.++ ++||+|++.-+.|. ......+++.+.++| +|+|
T Consensus 125 ------~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~L-kpgG 163 (376)
T 3r0q_C 125 ------SLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWL-KPTG 163 (376)
T ss_dssp ------CCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHE-EEEE
T ss_pred ------CcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhC-CCCe
Confidence 122 68999998554444 367888999999999 9988
No 318
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.18 E-value=1.5e-11 Score=118.17 Aligned_cols=103 Identities=12% Similarity=0.066 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccc---ccCCCeeEE--EecCCcccccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD---FTETRVSTF--VCDLISDDLSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~---~~~~~i~~~--~~d~~~~~~~~~~~~~~fD 148 (564)
.++.+|||+|||+|.++..+++. .+|+|+|+++ |+..+++... ..+.++.++ ++|+.. +++++||
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~------l~~~~fD 142 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHT------LPVERTD 142 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTT------SCCCCCS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhH------CCCCCCc
Confidence 67899999999999999988876 5799999999 5433322211 011267888 888864 2467999
Q ss_pred EEEEcccccCCCh---hHH--HHHHHHHHhccCCCe--EEEEEecC
Q 008457 149 IVTMVFVLSAVSP---EKM--SLVLQNIKKVLKPTG--YVLFRDYA 187 (564)
Q Consensus 149 ~V~~~~vl~~~~~---~~~--~~~l~~~~r~LkpgG--~lii~~~~ 187 (564)
+|+|..+ ++.+. +.. ..+|..+.++||||| .+++..+.
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9999877 44321 111 138899999999999 99987665
No 319
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.18 E-value=3.8e-10 Score=114.46 Aligned_cols=132 Identities=14% Similarity=0.120 Sum_probs=99.6
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEE
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
..++.+|||+|||+|.++..++...+..+|+|+|+|+.|++.|+++....+ .++++.++|+... ++++++||+|
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~----~~~~~~fD~I 290 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL----SQYVDSVDFA 290 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG----GGTCSCEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC----CcccCCcCEE
Confidence 467899999999999999999998655589999999999999999876544 4799999999654 3356899999
Q ss_pred EEcccccCCC------hhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHH
Q 008457 151 TMVFVLSAVS------PEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFL 224 (564)
Q Consensus 151 ~~~~vl~~~~------~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 224 (564)
+++-.+..-. .+....+++++.++| ||.+++... +.+.+
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~---------------------------------~~~~~ 335 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT---------------------------------EKKAI 335 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES---------------------------------CHHHH
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC---------------------------------CHHHH
Confidence 9976544221 122367889999988 444444321 46777
Q ss_pred HHHHHhCCCcEEEeeeeec
Q 008457 225 TSLFKENGFDVEELGLCCK 243 (564)
Q Consensus 225 ~~~l~~aGf~~~~~~~~~~ 243 (564)
.+.+.+.||+..+....++
T Consensus 336 ~~~~~~~G~~~~~~~~~~n 354 (373)
T 3tm4_A 336 EEAIAENGFEIIHHRVIGH 354 (373)
T ss_dssp HHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHcCCEEEEEEEEEc
Confidence 8899999999877655443
No 320
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.18 E-value=2.4e-10 Score=106.49 Aligned_cols=130 Identities=10% Similarity=-0.002 Sum_probs=92.6
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhh-hhcCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIK-EENNE 453 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~-~~~~~ 453 (564)
.+.+|||||||+|.++..++... ..+|+++|+++.+++.+++|+..+++ .++.+...|..+ +. .++++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~----~nv~~~~~d~~~------l~~~~~~~ 107 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA----QNVKLLNIDADT------LTDVFEPG 107 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC----SSEEEECCCGGG------HHHHCCTT
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC----CCEEEEeCCHHH------HHhhcCcC
Confidence 56799999999998888777764 56999999999999999999998775 346666554432 11 14567
Q ss_pred CccEEEEecee-eCC-------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 454 GFEVILGTDVS-YIP-------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 454 ~fD~Ii~~d~~-y~~-------~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
.||.|+..-.. +.. ...+.+++.+.++| +|+| .+++........ ....+.+.+.||....+.
T Consensus 108 ~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~L-kpgG--------~l~~~td~~~~~-~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 108 EVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVM-GKGG--------SIHFKTDNRGLF-EYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp SCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHH-TTSC--------EEEEEESCHHHH-HHHHHHHHHHTCEEEEEE
T ss_pred CcCEEEEECCCCCcCccccccccCcHHHHHHHHHHc-CCCC--------EEEEEeCCHHHH-HHHHHHHHHCCCcccccc
Confidence 89998754211 111 11478999999999 9988 888775433222 234566777899887764
No 321
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.17 E-value=4.1e-11 Score=116.36 Aligned_cols=120 Identities=10% Similarity=0.043 Sum_probs=88.7
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCCC-cEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCc
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPD-VFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSS 146 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~-~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~ 146 (564)
..+...++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.++++....+ .++.+.+.|+...........++
T Consensus 77 ~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~ 156 (274)
T 3ajd_A 77 IVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIF 156 (274)
T ss_dssp HHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCC
T ss_pred HHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhcccc
Confidence 4455678899999999999999999987655 899999999999999998865444 37899999885432100002568
Q ss_pred eeEEEEccc------ccC---CCh-------hHHHHHHHHHHhccCCCeEEEEEecCC
Q 008457 147 IDIVTMVFV------LSA---VSP-------EKMSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 147 fD~V~~~~v------l~~---~~~-------~~~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
||+|++... +.+ ++. .....+++++.++|||||.+++++...
T Consensus 157 fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 157 FDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 999999632 211 000 245789999999999999999976543
No 322
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.17 E-value=3e-10 Score=118.11 Aligned_cols=118 Identities=16% Similarity=0.196 Sum_probs=90.6
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCCC-cEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCc
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPD-VFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSS 146 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~-~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~ 146 (564)
..+...++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.++++....+ .++.+.++|+.... ..+++++
T Consensus 253 ~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~--~~~~~~~ 330 (450)
T 2yxl_A 253 IVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP--EIIGEEV 330 (450)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS--SSSCSSC
T ss_pred HhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc--hhhccCC
Confidence 3455678899999999999999999998665 799999999999999998865444 47889888886432 1245578
Q ss_pred eeEEEE------cccccCCCh-------hH-------HHHHHHHHHhccCCCeEEEEEecCC
Q 008457 147 IDIVTM------VFVLSAVSP-------EK-------MSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 147 fD~V~~------~~vl~~~~~-------~~-------~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
||+|++ ..++++.+. ++ ...+|.++.++|||||.+++++...
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999997 234443331 11 2678999999999999999987654
No 323
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.17 E-value=2e-10 Score=108.75 Aligned_cols=136 Identities=17% Similarity=0.133 Sum_probs=94.1
Q ss_pred CCCCCCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhh
Q 008457 371 NPTIVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIK 448 (564)
Q Consensus 371 ~~~~~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~ 448 (564)
...+.++.+|||+|||+|.++..++... ..+|+++|+++.+++.+.+++..+ .++.+...|..+... +
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~------~~v~~~~~d~~~~~~---~- 141 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR------TNIIPVIEDARHPHK---Y- 141 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC------TTEEEECSCTTCGGG---G-
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc------CCeEEEEcccCChhh---h-
Confidence 3445578899999999998888887762 469999999999998888888775 245555555433211 1
Q ss_pred hhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc----CChhH-H---HHHHHHcCCe
Q 008457 449 EENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ----VDEPS-M---LSAATQCGFR 520 (564)
Q Consensus 449 ~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~----~~~~~-~---~~~~~~~g~~ 520 (564)
+...++||+|++ |+. .......++..+.++| +|+| .++++...+. ..... | .+.+.+.||+
T Consensus 142 ~~~~~~~D~V~~-~~~-~~~~~~~~~~~~~~~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 210 (233)
T 2ipx_A 142 RMLIAMVDVIFA-DVA-QPDQTRIVALNAHTFL-RNGG--------HFVISIKANCIDSTASAEAVFASEVKKMQQENMK 210 (233)
T ss_dssp GGGCCCEEEEEE-CCC-CTTHHHHHHHHHHHHE-EEEE--------EEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEE
T ss_pred cccCCcEEEEEE-cCC-CccHHHHHHHHHHHHc-CCCe--------EEEEEEcccccccCCCHHHHHHHHHHHHHHCCCc
Confidence 224568999996 444 3444466788899999 9988 7777665532 11111 1 4667788999
Q ss_pred EEEEcCC
Q 008457 521 LVDKWPS 527 (564)
Q Consensus 521 ~~~~~~~ 527 (564)
+.++...
T Consensus 211 ~~~~~~~ 217 (233)
T 2ipx_A 211 PQEQLTL 217 (233)
T ss_dssp EEEEEEC
T ss_pred eEEEEec
Confidence 9986543
No 324
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.17 E-value=3.1e-10 Score=115.19 Aligned_cols=104 Identities=14% Similarity=0.089 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCC-CeeEEEecCCcccccCCC-CCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTET-RVSTFVCDLISDDLSRQI-SPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~-~i~~~~~d~~~~~~~~~~-~~~~fD~V~ 151 (564)
.++.+|||+| |+|.++..++..++..+|+++|+|+.+++.|+++....+. +++++++|+... + +. .+++||+|+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~-l--~~~~~~~fD~Vi 246 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKP-L--PDYALHKFDTFI 246 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSC-C--CTTTSSCBSEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhh-c--hhhccCCccEEE
Confidence 4678999999 9999999999887667999999999999999998754433 799999998651 2 21 246899999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEE-EEE
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYV-LFR 184 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~l-ii~ 184 (564)
++..+++. ....+++++.++|||||.+ ++.
T Consensus 247 ~~~p~~~~---~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 247 TDPPETLE---AIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp ECCCSSHH---HHHHHHHHHHHTBCSTTCEEEEE
T ss_pred ECCCCchH---HHHHHHHHHHHHcccCCeEEEEE
Confidence 98765543 3588999999999999954 544
No 325
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.17 E-value=4.6e-11 Score=112.78 Aligned_cols=110 Identities=17% Similarity=0.199 Sum_probs=85.5
Q ss_pred CCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcc--cccCCCCCCce
Q 008457 73 GAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISD--DLSRQISPSSI 147 (564)
Q Consensus 73 ~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~--~~~~~~~~~~f 147 (564)
..++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|+++....+ .+++++++|+... .+......++|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 35778999999999999999998765 7899999999999999998865433 5789999987532 11000011689
Q ss_pred eEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 148 DIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 148 D~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
|+|++... ......+++++.++|+|||.+++.+..
T Consensus 147 D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 147 DVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred cEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 99999654 235678999999999999999986543
No 326
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.17 E-value=1.4e-10 Score=108.61 Aligned_cols=119 Identities=11% Similarity=0.150 Sum_probs=92.4
Q ss_pred CCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCcc
Q 008457 377 GKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFE 456 (564)
Q Consensus 377 ~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD 456 (564)
+.+|||+|||+|.++..++.. +++|+++.+++.++++ .+.+...+..+. ++..++||
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~-------~~~~~~fD 104 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-----------GVFVLKGTAENL-------PLKDESFD 104 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-----------TCEEEECBTTBC-------CSCTTCEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-----------CCEEEEcccccC-------CCCCCCee
Confidence 789999999999776666543 9999999999999887 134444444321 23456899
Q ss_pred EEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc----------------------CChhHHHHHH
Q 008457 457 VILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ----------------------VDEPSMLSAA 514 (564)
Q Consensus 457 ~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~----------------------~~~~~~~~~~ 514 (564)
+|++..++++..+...+++.+.++| +|+| .++++...+. .+...+.+.+
T Consensus 105 ~v~~~~~l~~~~~~~~~l~~~~~~L-~pgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 175 (219)
T 1vlm_A 105 FALMVTTICFVDDPERALKEAYRIL-KKGG--------YLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLM 175 (219)
T ss_dssp EEEEESCGGGSSCHHHHHHHHHHHE-EEEE--------EEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHH
T ss_pred EEEEcchHhhccCHHHHHHHHHHHc-CCCc--------EEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHH
Confidence 9999999999999999999999999 9988 7777654321 2445778888
Q ss_pred HHcCCeEEEEcCC
Q 008457 515 TQCGFRLVDKWPS 527 (564)
Q Consensus 515 ~~~g~~~~~~~~~ 527 (564)
.++||+++++...
T Consensus 176 ~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 176 RKAGFEEFKVVQT 188 (219)
T ss_dssp HHTTCEEEEEEEE
T ss_pred HHCCCeEEEEecc
Confidence 9999999988644
No 327
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.17 E-value=1.1e-10 Score=112.36 Aligned_cols=135 Identities=16% Similarity=0.139 Sum_probs=100.7
Q ss_pred HHhcCCCCCCCCeEEEeCCcccHHHHHHHhc-C-CCEEEEEcCChhHHHHHHHHHHhc-CCCCCCCceEEEEeecCCCcc
Q 008457 367 VLARNPTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTAN-LKPPFLAKLITKRLEWGNRDH 443 (564)
Q Consensus 367 ~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~-~-~~~v~~tD~~~~~l~~~~~n~~~n-~~~~~~~~i~~~~l~w~~~~~ 443 (564)
++.......++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++|+..+ +. .++.+...|+.+.
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~----~~v~~~~~d~~~~-- 160 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV----ENVRFHLGKLEEA-- 160 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC----CCEEEEESCGGGC--
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC----CCEEEEECchhhc--
Confidence 3333334557889999999999888877776 4 569999999999999999999887 62 4677776665432
Q ss_pred chhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEE
Q 008457 444 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVD 523 (564)
Q Consensus 444 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~ 523 (564)
+++.++||+|++ +......+++.+.++| +|+| .+++...... ....+.+.+.+.||...+
T Consensus 161 -----~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L-~~gG--------~l~~~~~~~~-~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 161 -----ELEEAAYDGVAL-----DLMEPWKVLEKAALAL-KPDR--------FLVAYLPNIT-QVLELVRAAEAHPFRLER 220 (258)
T ss_dssp -----CCCTTCEEEEEE-----ESSCGGGGHHHHHHHE-EEEE--------EEEEEESCHH-HHHHHHHHHTTTTEEEEE
T ss_pred -----CCCCCCcCEEEE-----CCcCHHHHHHHHHHhC-CCCC--------EEEEEeCCHH-HHHHHHHHHHHCCCceEE
Confidence 134468999986 3456678999999999 9987 7776655432 224677888889999888
Q ss_pred EcCC
Q 008457 524 KWPS 527 (564)
Q Consensus 524 ~~~~ 527 (564)
+++.
T Consensus 221 ~~~~ 224 (258)
T 2pwy_A 221 VLEV 224 (258)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8743
No 328
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.16 E-value=3e-11 Score=118.99 Aligned_cols=109 Identities=15% Similarity=0.178 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc-----CCCeeEEEecCCcccccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-----ETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++.... ..+++++.+|+... + +...++||
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~-l--~~~~~~fD 183 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEF-L--KNHKNEFD 183 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHH-H--HHCTTCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHH-H--HhcCCCce
Confidence 4668999999999999999998766789999999999999999987532 46789999987542 1 11457899
Q ss_pred EEEEcccccCCChhHH--HHHHHHHHhccCCCeEEEEEe
Q 008457 149 IVTMVFVLSAVSPEKM--SLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 149 ~V~~~~vl~~~~~~~~--~~~l~~~~r~LkpgG~lii~~ 185 (564)
+|++...-+.-+.... ..++++++++|+|||++++..
T Consensus 184 ~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 184 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 9999654222221222 689999999999999999864
No 329
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.16 E-value=2.7e-11 Score=117.06 Aligned_cols=103 Identities=17% Similarity=0.121 Sum_probs=75.4
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccc---cCCCeeEE--EecCCcccccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF---TETRVSTF--VCDLISDDLSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~---~~~~i~~~--~~d~~~~~~~~~~~~~~fD 148 (564)
.++.+|||+|||+|.++..+++. .+|+|+|+++ |+..++++... .+.++.++ ++|+.. +++++||
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~------l~~~~fD 150 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTK------MEPFQAD 150 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGG------CCCCCCS
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhh------CCCCCcC
Confidence 57889999999999999998887 5799999999 64443332111 11267888 888754 2467999
Q ss_pred EEEEcccccCCCh---hHH--HHHHHHHHhccCCCe--EEEEEecC
Q 008457 149 IVTMVFVLSAVSP---EKM--SLVLQNIKKVLKPTG--YVLFRDYA 187 (564)
Q Consensus 149 ~V~~~~vl~~~~~---~~~--~~~l~~~~r~LkpgG--~lii~~~~ 187 (564)
+|+|..+ ++.+. +.. ..+|..+.++||||| .+++..+.
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 9999877 44321 111 137899999999999 99987655
No 330
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.16 E-value=1.6e-10 Score=113.00 Aligned_cols=125 Identities=17% Similarity=0.196 Sum_probs=92.9
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++..++. ++.+...|..+. . ..++|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g-~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~-------~-~~~~f 185 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG-YDVTSWDHNENSIAFLNETKEKENL-----NISTALYDINAA-------N-IQENY 185 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTC-----CEEEEECCGGGC-------C-CCSCE
T ss_pred CCCcEEEECCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHHcCC-----ceEEEEeccccc-------c-ccCCc
Confidence 67899999999998887777764 5999999999999999999998764 466665555432 1 15689
Q ss_pred cEEEEeceeeCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec------------cCChhHHHHHHHHcCCeE
Q 008457 456 EVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------QVDEPSMLSAATQCGFRL 521 (564)
Q Consensus 456 D~Ii~~d~~y~~--~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r------------~~~~~~~~~~~~~~g~~~ 521 (564)
|+|+++.++++. .....+++.+.++| +|+| .+++..... ......+.+.+. +|++
T Consensus 186 D~i~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~ 254 (286)
T 3m70_A 186 DFIVSTVVFMFLNRERVPSIIKNMKEHT-NVGG--------YNLIVAAMSTDDVPCPLPFSFTFAENELKEYYK--DWEF 254 (286)
T ss_dssp EEEEECSSGGGSCGGGHHHHHHHHHHTE-EEEE--------EEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTT--TSEE
T ss_pred cEEEEccchhhCCHHHHHHHHHHHHHhc-CCCc--------EEEEEEecCCCCCCCCCCccccCCHHHHHHHhc--CCEE
Confidence 999999998864 56779999999999 9988 655544322 122334445443 4888
Q ss_pred EEEc
Q 008457 522 VDKW 525 (564)
Q Consensus 522 ~~~~ 525 (564)
.+..
T Consensus 255 ~~~~ 258 (286)
T 3m70_A 255 LEYN 258 (286)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 331
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.16 E-value=1.5e-10 Score=112.70 Aligned_cols=134 Identities=14% Similarity=0.181 Sum_probs=99.4
Q ss_pred HhcCCCCCCCCeEEEeCCcccHHHHHHHhc-C-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccch
Q 008457 368 LARNPTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIE 445 (564)
Q Consensus 368 l~~~~~~~~~~~vLelG~G~G~l~~~~~~~-~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~ 445 (564)
+.....+.++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++|+..+++. .++.+...|+.+.
T Consensus 104 i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~---- 176 (277)
T 1o54_A 104 IAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI---ERVTIKVRDISEG---- 176 (277)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG---GGEEEECCCGGGC----
T ss_pred HHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC---CCEEEEECCHHHc----
Confidence 333334557889999999999888888776 4 569999999999999999999887653 3566655544321
Q ss_pred hhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 446 AIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 446 ~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
++.++||+|++ +......+++.+.++| +|+| .+++...... ....+.+.+.+.||...+++
T Consensus 177 ----~~~~~~D~V~~-----~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~-~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 177 ----FDEKDVDALFL-----DVPDPWNYIDKCWEAL-KGGG--------RFATVCPTTN-QVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp ----CSCCSEEEEEE-----CCSCGGGTHHHHHHHE-EEEE--------EEEEEESSHH-HHHHHHHHHHHSSEEEEEEE
T ss_pred ----ccCCccCEEEE-----CCcCHHHHHHHHHHHc-CCCC--------EEEEEeCCHH-HHHHHHHHHHHCCCceeEEE
Confidence 23468999986 3345668899999999 9987 7776654332 12367778888999999888
Q ss_pred CC
Q 008457 526 PS 527 (564)
Q Consensus 526 ~~ 527 (564)
+.
T Consensus 238 ~~ 239 (277)
T 1o54_A 238 ES 239 (277)
T ss_dssp CC
T ss_pred EE
Confidence 65
No 332
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.16 E-value=3.2e-10 Score=115.48 Aligned_cols=133 Identities=12% Similarity=0.068 Sum_probs=103.0
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 451 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~ 451 (564)
...++.+|||+|||+|.++..++... ..+++++|+ +.+++.+++|+..+++. +++.+...|+.+. ++
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--------~~ 246 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLA---DRVTVAEGDFFKP--------LP 246 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT---TTEEEEECCTTSC--------CS
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCC---CceEEEeCCCCCc--------CC
Confidence 34567899999999998888877765 459999999 99999999999887763 4688887776532 12
Q ss_pred CCCccEEEEeceeeCCCCh--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEe--e--c---------------------c
Q 008457 452 NEGFEVILGTDVSYIPEAI--LPLFATAKELTASSNKSLREDQQPAFILCHI--F--R---------------------Q 504 (564)
Q Consensus 452 ~~~fD~Ii~~d~~y~~~~~--~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~--~--r---------------------~ 504 (564)
..||+|++..++++.... ..+++.+.++| +|+| .+++... . . .
T Consensus 247 -~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (374)
T 1qzz_A 247 -VTADVVLLSFVLLNWSDEDALTILRGCVRAL-EPGG--------RLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRV 316 (374)
T ss_dssp -CCEEEEEEESCGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEECCH-------HHHHHHHHHHHHHHHSCCC
T ss_pred -CCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCCc--------EEEEEechhhcCCCCCcchhhhcchHHHHhCCCcC
Confidence 259999999999876655 48999999999 9987 7776544 1 1 1
Q ss_pred CChhHHHHHHHHcCCeEEEEcCC
Q 008457 505 VDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 505 ~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
.+...+.+.+.++||+++++...
T Consensus 317 ~~~~~~~~ll~~aGf~~~~~~~~ 339 (374)
T 1qzz_A 317 RTRDEVVDLAGSAGLALASERTS 339 (374)
T ss_dssp CCHHHHHHHHHTTTEEEEEEEEE
T ss_pred CCHHHHHHHHHHCCCceEEEEEC
Confidence 24456778888999999998755
No 333
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.16 E-value=1.6e-10 Score=113.54 Aligned_cols=137 Identities=16% Similarity=0.080 Sum_probs=87.7
Q ss_pred echhHHHHHHHHhcCC-CCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCC--ceEE
Q 008457 357 LWESAHLMAAVLARNP-TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLA--KLIT 433 (564)
Q Consensus 357 ~W~~~~~l~~~l~~~~-~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~--~i~~ 433 (564)
-|-.+..+..++.... ...++.+|||||||+|.....++..+..+|+++|+|+.+++.|++.....+...... .+.+
T Consensus 28 n~vks~li~~~~~~~~~~~~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f 107 (302)
T 2vdw_A 28 NYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDY 107 (302)
T ss_dssp HHHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEE
T ss_pred HHHHHHHHHHHHhhhhhccCCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccch
Confidence 4555555555543211 112578999999999965555555566799999999999999998876543210000 1333
Q ss_pred EEeecCCCccchhhh-hhcCCCccEEEEeceee---CCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 434 KRLEWGNRDHIEAIK-EENNEGFEVILGTDVSY---IPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 434 ~~l~w~~~~~~~~~~-~~~~~~fD~Ii~~d~~y---~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
...+...+.....+. .+++++||+|++..++. +.+....+++.+.++| +|+| .++++...
T Consensus 108 ~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~L-kpGG--------~~i~~~~~ 171 (302)
T 2vdw_A 108 IQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELT-ASGG--------KVLITTMD 171 (302)
T ss_dssp EECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHE-EEEE--------EEEEEEEC
T ss_pred hhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHc-CCCC--------EEEEEeCC
Confidence 333332111001221 23567999999888763 3456789999999999 9988 77777654
No 334
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.16 E-value=1.7e-10 Score=110.92 Aligned_cols=126 Identities=12% Similarity=0.126 Sum_probs=91.3
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
+|.+|||+|||+|.++..++..++++|+++|+||.+++.+++|+..|++. +++.+...|-.+. ...+.|
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~---~~v~~~~~D~~~~--------~~~~~~ 193 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE---DRMSAYNMDNRDF--------PGENIA 193 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT---TTEEEECSCTTTC--------CCCSCE
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEeCcHHHh--------ccccCC
Confidence 68899999999999999888888889999999999999999999999985 5677766554321 134689
Q ss_pred cEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEE-Eeec-cC---ChhHHHHHHHHcCCeEEEEc
Q 008457 456 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILC-HIFR-QV---DEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 456 D~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~-~~~r-~~---~~~~~~~~~~~~g~~~~~~~ 525 (564)
|.|++..+.+. ..++..+.++| +++| .+.+- .... .. ....+.+.+.+.|++++.+.
T Consensus 194 D~Vi~~~p~~~----~~~l~~a~~~l-k~gG--------~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~ 255 (278)
T 3k6r_A 194 DRILMGYVVRT----HEFIPKALSIA-KDGA--------IIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp EEEEECCCSSG----GGGHHHHHHHE-EEEE--------EEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEECCCCcH----HHHHHHHHHHc-CCCC--------EEEEEeeecccccchhHHHHHHHHHHHcCCcEEEEE
Confidence 99987655433 35667777899 8877 44321 1111 11 11245566677899887553
No 335
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.16 E-value=8.5e-11 Score=111.53 Aligned_cols=110 Identities=19% Similarity=0.164 Sum_probs=86.0
Q ss_pred cCCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCccc--cc-CCCCCC
Q 008457 72 SGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDD--LS-RQISPS 145 (564)
Q Consensus 72 ~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~--~~-~~~~~~ 145 (564)
...++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|+++....+ .+++++++|+.... +. ...+.+
T Consensus 67 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 67 KLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred HhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 335778999999999999999999866 7899999999999999998865433 46899999875421 10 001257
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEec
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
+||+|++... ......+++++.++|+|||++++.+.
T Consensus 147 ~fD~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 147 SYDFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp CEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CcCEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 8999998532 24667899999999999999988654
No 336
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.16 E-value=6.2e-10 Score=111.33 Aligned_cols=133 Identities=12% Similarity=0.042 Sum_probs=104.4
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 451 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~ 451 (564)
......+|||+|||+|.++..++... ..+++++|+ +.+++.+++++...++. +++.+...|..+. ++
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--------~p 233 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLS---GRAQVVVGSFFDP--------LP 233 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT---TTEEEEECCTTSC--------CC
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcC---cCeEEecCCCCCC--------CC
Confidence 33456899999999998887777654 458999999 99999999999887653 6788888776521 22
Q ss_pred CCCccEEEEeceeeCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------------cCChhH
Q 008457 452 NEGFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFR--------------------QVDEPS 509 (564)
Q Consensus 452 ~~~fD~Ii~~d~~y~~~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r--------------------~~~~~~ 509 (564)
. +||+|++..++++..+ ...+++.+.++| +|+| .+++..... ..+..+
T Consensus 234 ~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e 303 (332)
T 3i53_A 234 A-GAGGYVLSAVLHDWDDLSAVAILRRCAEAA-GSGG--------VVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAE 303 (332)
T ss_dssp C-SCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTTC--------EEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHH
T ss_pred C-CCcEEEEehhhccCCHHHHHHHHHHHHHhc-CCCC--------EEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHH
Confidence 3 8999999999988776 589999999999 9988 777654321 123456
Q ss_pred HHHHHHHcCCeEEEEcCC
Q 008457 510 MLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 510 ~~~~~~~~g~~~~~~~~~ 527 (564)
+.+.++++||++++++..
T Consensus 304 ~~~ll~~aGf~~~~~~~~ 321 (332)
T 3i53_A 304 LGELAAQAGLAVRAAHPI 321 (332)
T ss_dssp HHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHCCCEEEEEEEC
Confidence 778889999999999854
No 337
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.16 E-value=2.8e-10 Score=111.66 Aligned_cols=133 Identities=11% Similarity=0.162 Sum_probs=93.6
Q ss_pred CCCCeEEEeCCcccHHHHHH----Hhc-CCCEE--EEEcCChhHHHHHHHHHHhc-CCCCCCCceEEEEeecCCCccchh
Q 008457 375 VAGKKVLELGCGCGGICSMV----AAG-SADLV--VATDGDSIALDLLAQNVTAN-LKPPFLAKLITKRLEWGNRDHIEA 446 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~----~~~-~~~~v--~~tD~~~~~l~~~~~n~~~n-~~~~~~~~i~~~~l~w~~~~~~~~ 446 (564)
.++.+|||||||+|.++..+ +.. ....| +++|.|++|++.+++++... ++ ..+.+ .|...+. +.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~----~~v~~---~~~~~~~-~~ 122 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL----ENVKF---AWHKETS-SE 122 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC----TTEEE---EEECSCH-HH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC----CcceE---EEEecch-hh
Confidence 35679999999999655322 222 23444 99999999999999987653 22 23433 3433221 12
Q ss_pred hh-----hhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec------------------
Q 008457 447 IK-----EENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------------ 503 (564)
Q Consensus 447 ~~-----~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r------------------ 503 (564)
+. ++.+++||+|+++.++++..+...+++.+.++| +|+| .++++....
T Consensus 123 ~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~ 193 (292)
T 2aot_A 123 YQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLL-GTNA--------KMLIIVVSGSSGWDKLWKKYGSRFPQD 193 (292)
T ss_dssp HHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTE-EEEE--------EEEEEEECTTSHHHHHHHHHGGGSCCC
T ss_pred hhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHc-CCCc--------EEEEEEecCCccHHHHHHHHHHhccCC
Confidence 21 134679999999999999999999999999999 9988 777654321
Q ss_pred ----cCChhHHHHHHHHcCCeEEEE
Q 008457 504 ----QVDEPSMLSAATQCGFRLVDK 524 (564)
Q Consensus 504 ----~~~~~~~~~~~~~~g~~~~~~ 524 (564)
..+...+.+.+.++||++...
T Consensus 194 ~~~~~~~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 194 DLCQYITSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp TTCCCCCHHHHHHHHHHHTCCEEEE
T ss_pred CcccCCCHHHHHHHHHHCCCceEEE
Confidence 122346778888999998874
No 338
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.15 E-value=1.9e-10 Score=109.87 Aligned_cols=147 Identities=10% Similarity=-0.038 Sum_probs=94.6
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHh----------cCCC---CCCC
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTA----------NLKP---PFLA 429 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~----------n~~~---~~~~ 429 (564)
.+.+++.......++.+|||+|||+|..+..++..+ .+|+++|+|+.+++.++++... ++.. ....
T Consensus 55 ~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G-~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (252)
T 2gb4_A 55 LLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRG-HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSG 133 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTT-CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTS
T ss_pred HHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCC-CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCC
Confidence 345555432222367899999999998887777764 4899999999999999765431 0000 0013
Q ss_pred ceEEEEeecCCCccchhhhhhc-CCCccEEEEeceeeC--CCChHHHHHHHHHHhhccCCCCCCCCCcEEE-EEEeec--
Q 008457 430 KLITKRLEWGNRDHIEAIKEEN-NEGFEVILGTDVSYI--PEAILPLFATAKELTASSNKSLREDQQPAFI-LCHIFR-- 503 (564)
Q Consensus 430 ~i~~~~l~w~~~~~~~~~~~~~-~~~fD~Ii~~d~~y~--~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~-~~~~~r-- 503 (564)
++.+...|..+. +.. .++||+|++..++.. ......+++.+.++| +|+| .++ ++....
T Consensus 134 ~i~~~~~D~~~l-------~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~L-kpGG--------~l~l~~~~~~~~ 197 (252)
T 2gb4_A 134 SISLYCCSIFDL-------PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLL-RKEF--------QYLVAVLSYDPT 197 (252)
T ss_dssp SEEEEESCTTTG-------GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTE-EEEE--------EEEEEEEECCTT
T ss_pred ceEEEECccccC-------CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHc-CCCe--------EEEEEEEecCCc
Confidence 566665554322 112 268999998766654 345678999999999 9988 765 333211
Q ss_pred -------cCChhHHHHHHHHcCCeEEEEcCC
Q 008457 504 -------QVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 504 -------~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
..+..++.+.+.. +|+++.+...
T Consensus 198 ~~~g~~~~~~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 198 KHAGPPFYVPSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp SCCCSSCCCCHHHHHHHHTT-TEEEEEEEEE
T ss_pred cCCCCCCCCCHHHHHHHhhC-CeEEEEEecc
Confidence 1233456666654 6998887543
No 339
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.15 E-value=5e-11 Score=117.92 Aligned_cols=109 Identities=18% Similarity=0.175 Sum_probs=86.3
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccc------cCCCeeEEEecCCcccccCCCCCCce
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF------TETRVSTFVCDLISDDLSRQISPSSI 147 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~------~~~~i~~~~~d~~~~~~~~~~~~~~f 147 (564)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++... ...+++++++|+... + +..+++|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~-l--~~~~~~f 152 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY-L--ERTEERY 152 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH-H--HHCCCCE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH-H--HhcCCCc
Confidence 466899999999999999999876678999999999999999987642 146899999998542 1 1136789
Q ss_pred eEEEEcccccC---CChhH--HHHHHHHHHhccCCCeEEEEEe
Q 008457 148 DIVTMVFVLSA---VSPEK--MSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 148 D~V~~~~vl~~---~~~~~--~~~~l~~~~r~LkpgG~lii~~ 185 (564)
|+|++....++ -+... ...++++++++|+|||.+++..
T Consensus 153 D~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 153 DVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999766554 21112 3689999999999999999853
No 340
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.15 E-value=4.2e-11 Score=117.67 Aligned_cols=109 Identities=15% Similarity=0.174 Sum_probs=82.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccc-----cCCCeeEEEecCCcccccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++... ...+++++.+|+... + +..+++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~-l--~~~~~~fD 170 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEF-M--KQNQDAFD 170 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH-H--HTCSSCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH-H--hhCCCCce
Confidence 467899999999999999999876678999999999999999988643 246899999997532 1 12457899
Q ss_pred EEEEcccccCCChh--HHHHHHHHHHhccCCCeEEEEEe
Q 008457 149 IVTMVFVLSAVSPE--KMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 149 ~V~~~~vl~~~~~~--~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
+|++....+..+.. ....++++++++|+|||++++..
T Consensus 171 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 171 VIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 99996543322211 23568999999999999999864
No 341
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.15 E-value=6.1e-11 Score=116.39 Aligned_cols=151 Identities=14% Similarity=0.087 Sum_probs=93.2
Q ss_pred CCChhHHHHHHHHHhHhHHHHHHhhcccc-----------------ccccchh-HHHHhhhccCCCCCeEEEEcCCcccc
Q 008457 28 GVSPFWRDKYEREAKKYWDLFYKRHQDRF-----------------FKDRHYL-DKEWGRYFSGAGRKDVLEVGCGAGNT 89 (564)
Q Consensus 28 ~~~~~~~~~y~~~a~~ywd~~~~~~~~~~-----------------~~~~~~~-~~~~~~~l~~~~~~~VLDiGcG~G~~ 89 (564)
...+.|+...+...++||+.|........ +..+..+ ...+.+.....++.+|||+|||+|.+
T Consensus 17 ~~~~~~k~~l~~~~~~~f~~y~~~~i~e~~~~~a~~~l~~g~~~~~~~sR~a~KL~~i~~~~~~~~g~~VLDlGcG~G~~ 96 (305)
T 2p41_A 17 TLGEKWKSRLNALGKSEFQIYKKSGIQEVDRTLAKEGIKRGETDHHAVSRGSAKLRWFVERNLVTPEGKVVDLGCGRGGW 96 (305)
T ss_dssp SHHHHHHHHHHHSCHHHHHHHHHTTCEEEECHHHHHHHHTTCCSSCCSSTHHHHHHHHHHTTSSCCCEEEEEETCTTSHH
T ss_pred cchHHHHHHHhHhhHHHHHHhcccCccccCHHHHHHHHHcCCCcCCccccHHHHHHHHHHcCCCCCCCEEEEEcCCCCHH
Confidence 34566777778888889998643321110 1111111 11111111225688999999999999
Q ss_pred HHHHHHhCCCcEEEEEeC----ChHHHHHHHhcccccCCCeeEEEe-cCCcccccCCCCCCceeEEEEccccc--CCChh
Q 008457 90 IFPLIAAYPDVFVYACDF----SPRAVNLVMTHKDFTETRVSTFVC-DLISDDLSRQISPSSIDIVTMVFVLS--AVSPE 162 (564)
Q Consensus 90 ~~~l~~~~~~~~v~~iD~----s~~~l~~a~~~~~~~~~~i~~~~~-d~~~~~~~~~~~~~~fD~V~~~~vl~--~~~~~ 162 (564)
+..+++. .+|+|+|+ ++.+++.+... .....++.+.++ |+.. ++.++||+|+|..+++ +...+
T Consensus 97 s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~D~~~------l~~~~fD~V~sd~~~~~g~~~~d 166 (305)
T 2p41_A 97 SYYCGGL---KNVREVKGLTKGGPGHEEPIPMS-TYGWNLVRLQSGVDVFF------IPPERCDTLLCDIGESSPNPTVE 166 (305)
T ss_dssp HHHHHTS---TTEEEEEEECCCSTTSCCCCCCC-STTGGGEEEECSCCTTT------SCCCCCSEEEECCCCCCSSHHHH
T ss_pred HHHHHhc---CCEEEEeccccCchhHHHHHHhh-hcCCCCeEEEecccccc------CCcCCCCEEEECCccccCcchhh
Confidence 9999887 47999999 56443221111 001246788877 7653 2456899999977654 11011
Q ss_pred HH--HHHHHHHHhccCCCeEEEEEecCC
Q 008457 163 KM--SLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 163 ~~--~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
.. ..+|..+.++|||||.|++..+..
T Consensus 167 ~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 167 AGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 11 157899999999999999876554
No 342
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.15 E-value=5.1e-10 Score=113.89 Aligned_cols=135 Identities=17% Similarity=0.085 Sum_probs=95.4
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhh--cC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE--NN 452 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~--~~ 452 (564)
.++.+|||+|||+|.++..++..++.+|+++|+|+.+++.+++|+..|++.. .++.+...|..+ .+..+ ..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~--~~v~~~~~D~~~-----~l~~~~~~~ 283 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDM--ANHQLVVMDVFD-----YFKYARRHH 283 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCC--TTEEEEESCHHH-----HHHHHHHTT
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc--cceEEEECCHHH-----HHHHHHHhC
Confidence 4778999999999988888887777799999999999999999999998741 156666554321 11111 24
Q ss_pred CCccEEEEeceeeC-----C----CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHH----HHcCC
Q 008457 453 EGFEVILGTDVSYI-----P----EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAA----TQCGF 519 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~-----~----~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~----~~~g~ 519 (564)
.+||+|++....+. . ..+..+++.+.++| +|+| .++++........+.|.+.+ ...|.
T Consensus 284 ~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L-~pgG--------~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 354 (385)
T 2b78_A 284 LTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEIL-SENG--------LIIASTNAANMTVSQFKKQIEKGFGKQKH 354 (385)
T ss_dssp CCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTE-EEEE--------EEEEEECCTTSCHHHHHHHHHHHHTTCCC
T ss_pred CCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhc-CCCc--------EEEEEeCCCcCCHHHHHHHHHHHHHHcCC
Confidence 58999986433321 1 13445777788999 9988 88888887777665555444 45677
Q ss_pred eEEEEc
Q 008457 520 RLVDKW 525 (564)
Q Consensus 520 ~~~~~~ 525 (564)
++.+..
T Consensus 355 ~~~~~~ 360 (385)
T 2b78_A 355 TYLDLQ 360 (385)
T ss_dssp EEEEEE
T ss_pred cEEEeC
Confidence 744443
No 343
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.14 E-value=1.8e-10 Score=109.34 Aligned_cols=104 Identities=10% Similarity=0.062 Sum_probs=76.9
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCc
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 442 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~ 442 (564)
.+.+++.... .++.+|||+|||+|.++..++..+. +|+++|+++.+++.++++. .++.+...|..+.
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~- 95 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL---------PDATLHQGDMRDF- 95 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTC-
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHc-
Confidence 4555555433 3678999999999988877776654 8999999999999998873 2355555555432
Q ss_pred cchhhhhhcCCCccEEEE-eceeeCC---CChHHHHHHHHHHhhccCCC
Q 008457 443 HIEAIKEENNEGFEVILG-TDVSYIP---EAILPLFATAKELTASSNKS 487 (564)
Q Consensus 443 ~~~~~~~~~~~~fD~Ii~-~d~~y~~---~~~~~l~~~~~~ll~~~~g~ 487 (564)
+. +++||+|++ .+++.+. .....+++.+.++| +|+|.
T Consensus 96 ------~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L-~pgG~ 136 (239)
T 3bxo_A 96 ------RL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHL-EPGGV 136 (239)
T ss_dssp ------CC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTE-EEEEE
T ss_pred ------cc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhc-CCCeE
Confidence 12 468999994 5576665 56788999999999 99883
No 344
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.14 E-value=5e-11 Score=116.05 Aligned_cols=107 Identities=11% Similarity=0.093 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccc-----------cCCCeeEEEecCCcccccCCC
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----------TETRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~-----------~~~~i~~~~~d~~~~~~~~~~ 142 (564)
.++.+|||||||+|.++..+++. +..+|+++|+++.+++.|+++... ...+++++.+|+... +. .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~-l~--~ 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEF-IK--N 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHH-HH--H
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHH-hc--c
Confidence 46789999999999999999888 678999999999999999987611 235789999987532 11 1
Q ss_pred CCCceeEEEEcccccCCChhH--HHHHHHHHHhccCCCeEEEEEe
Q 008457 143 SPSSIDIVTMVFVLSAVSPEK--MSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~~~~~--~~~~l~~~~r~LkpgG~lii~~ 185 (564)
+++||+|++....+..+... ...++++++++|+|||++++..
T Consensus 150 -~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 -NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp -CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 57899999966543222122 2678999999999999999863
No 345
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.14 E-value=4e-10 Score=105.29 Aligned_cols=127 Identities=13% Similarity=0.125 Sum_probs=88.3
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhh-hhcCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIK-EENNE 453 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~-~~~~~ 453 (564)
.+.+|||||||+|.++..++... ...|+++|+++.+++.+++|+..+++ .++.+...|- .+.+. .++++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l----~nv~~~~~Da-----~~~l~~~~~~~ 104 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL----SNLRVMCHDA-----VEVLHKMIPDN 104 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC----SSEEEECSCH-----HHHHHHHSCTT
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC----CcEEEEECCH-----HHHHHHHcCCC
Confidence 56799999999998887777665 45899999999999999999998876 3465543332 11111 14678
Q ss_pred CccEEEEe--ceeeCCCCh------HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHH-cCCeE
Q 008457 454 GFEVILGT--DVSYIPEAI------LPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQ-CGFRL 521 (564)
Q Consensus 454 ~fD~Ii~~--d~~y~~~~~------~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-~g~~~ 521 (564)
+||.|++. |........ +.+++.+.++| +|+| .++++........ .+.+.+.+ .+|+.
T Consensus 105 ~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~L-kpGG--------~l~i~td~~~~~~-~~~~~~~~~~~~~~ 171 (218)
T 3dxy_A 105 SLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKL-QLGG--------VFHMATDWEPYAE-HMLEVMSSIDGYKN 171 (218)
T ss_dssp CEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHE-EEEE--------EEEEEESCHHHHH-HHHHHHHTSTTEEE
T ss_pred ChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHc-CCCc--------EEEEEeCCHHHHH-HHHHHHHhCCCccc
Confidence 99999977 544333222 36999999999 9988 8888765544322 34444443 34544
No 346
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.14 E-value=3e-10 Score=105.63 Aligned_cols=99 Identities=16% Similarity=0.140 Sum_probs=78.2
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++..+ +..+|+++|+++.+++.++++. .++.+...|..+. ++++++|
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-------~~~~~~f 96 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEAL-------PFPGESF 96 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSC-------CSCSSCE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccC-------CCCCCcE
Confidence 7889999999999666554 3348999999999999999885 1234444444321 2345789
Q ss_pred cEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 456 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 456 D~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
|+|++..++++..+...+++.+.++| +|+| .++++...
T Consensus 97 D~v~~~~~l~~~~~~~~~l~~~~~~L-~pgG--------~l~i~~~~ 134 (211)
T 2gs9_A 97 DVVLLFTTLEFVEDVERVLLEARRVL-RPGG--------ALVVGVLE 134 (211)
T ss_dssp EEEEEESCTTTCSCHHHHHHHHHHHE-EEEE--------EEEEEEEC
T ss_pred EEEEEcChhhhcCCHHHHHHHHHHHc-CCCC--------EEEEEecC
Confidence 99999999999999999999999999 9988 77777654
No 347
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.14 E-value=1.2e-10 Score=116.08 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=81.6
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
...++.+|||+|||+|.++..++..+..+|+++|++ .+++.+++++..|+.. +++.+...|..+. +++.
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~---~~i~~~~~d~~~~-------~~~~ 103 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFS---DKITLLRGKLEDV-------HLPF 103 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCT---TTEEEEESCTTTS-------CCSS
T ss_pred hhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCC---CCEEEEECchhhc-------cCCC
Confidence 345788999999999988888777777799999999 5999999999998874 5677776665432 2344
Q ss_pred CCccEEEEece---eeCCCChHHHHHHHHHHhhccCC
Q 008457 453 EGFEVILGTDV---SYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 453 ~~fD~Ii~~d~---~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
++||+|++..+ +.+...++.+++.+.++| +|+|
T Consensus 104 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~L-kpgG 139 (328)
T 1g6q_1 104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYL-VEGG 139 (328)
T ss_dssp SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHE-EEEE
T ss_pred CcccEEEEeCchhhcccHHHHHHHHHHHHhhc-CCCe
Confidence 68999998744 345677889999999999 9988
No 348
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.14 E-value=7.4e-10 Score=112.36 Aligned_cols=138 Identities=10% Similarity=0.054 Sum_probs=106.3
Q ss_pred HHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccch
Q 008457 367 VLARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIE 445 (564)
Q Consensus 367 ~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~ 445 (564)
.+.......+..+|||+|||+|.++..++... ..+++++|+ +.+++.+++++...++. +++.+...|..+.
T Consensus 193 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~---~~v~~~~~d~~~~---- 264 (369)
T 3gwz_A 193 QVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLA---DRCEILPGDFFET---- 264 (369)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT---TTEEEEECCTTTC----
T ss_pred HHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcC---CceEEeccCCCCC----
Confidence 33333344567899999999998888777765 459999999 99999999999887754 6788888877521
Q ss_pred hhhhhcCCCccEEEEeceeeCCCChH--HHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc-------------------
Q 008457 446 AIKEENNEGFEVILGTDVSYIPEAIL--PLFATAKELTASSNKSLREDQQPAFILCHIFRQ------------------- 504 (564)
Q Consensus 446 ~~~~~~~~~fD~Ii~~d~~y~~~~~~--~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~------------------- 504 (564)
++. .||+|++..++++..+.. .+++.+.++| +|+| .+++......
T Consensus 265 ----~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~~~d~~~~~~~~ 330 (369)
T 3gwz_A 265 ----IPD-GADVYLIKHVLHDWDDDDVVRILRRIATAM-KPDS--------RLLVIDNLIDERPAASTLFVDLLLLVLVG 330 (369)
T ss_dssp ----CCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTC-CTTC--------EEEEEEEBCCSSCCHHHHHHHHHHHHHHS
T ss_pred ----CCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHc-CCCC--------EEEEEEeccCCCCCCchhHhhHHHHhhcC
Confidence 233 799999999998877655 7999999999 9988 7777544321
Q ss_pred ---CChhHHHHHHHHcCCeEEEEcC
Q 008457 505 ---VDEPSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 505 ---~~~~~~~~~~~~~g~~~~~~~~ 526 (564)
.+..++.+.++++||++++++.
T Consensus 331 g~~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 331 GAERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp CCCBCHHHHHHHHHTTTEEEEEEEE
T ss_pred CccCCHHHHHHHHHHCCCeEEEEEE
Confidence 2344677888899999999974
No 349
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.14 E-value=6.5e-10 Score=113.81 Aligned_cols=133 Identities=20% Similarity=0.150 Sum_probs=97.0
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCC-CCCCCceEEEEeecCCCccchhhhhh--cC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLK-PPFLAKLITKRLEWGNRDHIEAIKEE--NN 452 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~-~~~~~~i~~~~l~w~~~~~~~~~~~~--~~ 452 (564)
++.+|||+|||+|+++..++..++.+|+++|+++.+++.+++|+..|++ . .++.+...|..+ .+..+ ..
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~---~~v~~~~~D~~~-----~~~~~~~~~ 291 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDL---SKAEFVRDDVFK-----LLRTYRDRG 291 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCG---GGEEEEESCHHH-----HHHHHHHTT
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc---cceEEEECCHHH-----HHHHHHhcC
Confidence 7789999999999999888887777999999999999999999999986 3 256666554321 11111 14
Q ss_pred CCccEEEEeceeeCC---------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHH----HHHHHcCC
Q 008457 453 EGFEVILGTDVSYIP---------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSML----SAATQCGF 519 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~---------~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~~~g~ 519 (564)
.+||+|++....+.. .....++..+.++| +|+| .++++........+.|. +.+.+.|.
T Consensus 292 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 362 (396)
T 3c0k_A 292 EKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLL-NEGG--------ILLTFSCSGLMTSDLFQKIIADAAIDAGR 362 (396)
T ss_dssp CCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTE-EEEE--------EEEEEECCTTCCHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhc-CCCc--------EEEEEeCCCcCCHHHHHHHHHHHHHHcCC
Confidence 689999864332221 56778899999999 9988 88888777766644333 35556786
Q ss_pred eEEEEc
Q 008457 520 RLVDKW 525 (564)
Q Consensus 520 ~~~~~~ 525 (564)
.+..+.
T Consensus 363 ~~~~i~ 368 (396)
T 3c0k_A 363 DVQFIE 368 (396)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 666554
No 350
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.14 E-value=4.4e-10 Score=107.15 Aligned_cols=117 Identities=14% Similarity=0.022 Sum_probs=83.0
Q ss_pred HHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccc
Q 008457 365 AAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 444 (564)
Q Consensus 365 ~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~ 444 (564)
.+.+.....+.++.+|||||||+|.++..++.. +.+|+++|+|+.|++.+++|+..+. ...+|.+.+..
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~----------v~~~~~~~~~~ 102 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRC----------VTIDLLDITAE 102 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSC----------CEEEECCTTSC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcc----------ceeeeeecccc
Confidence 344555555668899999999999887777765 4689999999999999999976541 12334332110
Q ss_pred hhhhhhcCCCccEEEEeceeeC--CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc
Q 008457 445 EAIKEENNEGFEVILGTDVSYI--PEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ 504 (564)
Q Consensus 445 ~~~~~~~~~~fD~Ii~~d~~y~--~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~ 504 (564)
......++||+|+++.++.+ .+....+++.+.++| |+| .++++.....
T Consensus 103 --~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL--PGG--------~l~lS~~~g~ 152 (261)
T 3iv6_A 103 --IPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV--GSG--------TVRASVKLGF 152 (261)
T ss_dssp --CCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH--TTS--------EEEEEEEBSC
T ss_pred --cccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC--cCc--------EEEEEeccCc
Confidence 00112468999999888765 345677889999888 777 8888877643
No 351
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.14 E-value=5.3e-10 Score=113.47 Aligned_cols=167 Identities=19% Similarity=0.185 Sum_probs=105.7
Q ss_pred EEEEeCCceEEEEEecccccccCCCccceechhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcC
Q 008457 328 IEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDG 407 (564)
Q Consensus 328 ~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~ 407 (564)
..+...|..+.+... ....+|.. | .......++.... .++.+|||+|||+|+++..++..++. |+++|+
T Consensus 176 ~~v~E~g~~f~vd~~------~~~~tG~f-~-dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDi 244 (393)
T 4dmg_A 176 LEVEEDGLRFPIPLA------LAQKTGYY-L-DQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARKGAY-ALAVDK 244 (393)
T ss_dssp EEEEETTEEEEEETT------TCCTTSSC-G-GGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHTTCE-EEEEES
T ss_pred EEEEECCEEEEEech------hccccCcC-C-CHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHcCCe-EEEEEC
Confidence 445556666666421 22345532 2 2222234444322 24899999999999888888877655 999999
Q ss_pred ChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeCC---------CChHHHHHHHH
Q 008457 408 DSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP---------EAILPLFATAK 478 (564)
Q Consensus 408 ~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~---------~~~~~l~~~~~ 478 (564)
|+.+++.+++|+..|++. .+ +... +..+.+..+ .+.||+|++....|.. ..+..+++.+.
T Consensus 245 s~~al~~a~~n~~~ng~~---~~--~~~~-----D~~~~l~~~-~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~ 313 (393)
T 4dmg_A 245 DLEALGVLDQAALRLGLR---VD--IRHG-----EALPTLRGL-EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREAL 313 (393)
T ss_dssp CHHHHHHHHHHHHHHTCC---CE--EEES-----CHHHHHHTC-CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCC---Cc--EEEc-----cHHHHHHHh-cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999874 22 2221 222222222 3359999864333332 24568888899
Q ss_pred HHhhccCCCCCCCCCcEEEEEEeeccCChhHHH----HHHHHcCCeEEEEc
Q 008457 479 ELTASSNKSLREDQQPAFILCHIFRQVDEPSML----SAATQCGFRLVDKW 525 (564)
Q Consensus 479 ~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~~~g~~~~~~~ 525 (564)
++| +|+| .++++........+.|. +.+.+.|..+..+.
T Consensus 314 ~~L-kpGG--------~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~ 355 (393)
T 4dmg_A 314 RLL-AEEG--------FLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVHR 355 (393)
T ss_dssp HTE-EEEE--------EEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred Hhc-CCCC--------EEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEEE
Confidence 999 9988 77777666666654444 34445676666554
No 352
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.14 E-value=3.6e-10 Score=113.17 Aligned_cols=132 Identities=13% Similarity=0.072 Sum_probs=102.8
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
.++.+|||+|||+|.++..++... ..+++++|++ .+++.+++++..+++. +++.+...|+.+. +. +.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-------~~-~~ 231 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVA---SRYHTIAGSAFEV-------DY-GN 231 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCG---GGEEEEESCTTTS-------CC-CS
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCC---cceEEEecccccC-------CC-CC
Confidence 467899999999998887777764 4599999998 9999999999887653 4688887777543 11 23
Q ss_pred CccEEEEeceeeCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc-------------------------CC
Q 008457 454 GFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------------------VD 506 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~--~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~-------------------------~~ 506 (564)
.||+|++..++++. .....+++.+.++| +|+| .+++...... .+
T Consensus 232 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 302 (335)
T 2r3s_A 232 DYDLVLLPNFLHHFDVATCEQLLRKIKTAL-AVEG--------KVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYT 302 (335)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCC
T ss_pred CCcEEEEcchhccCCHHHHHHHHHHHHHhC-CCCc--------EEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCC
Confidence 59999999999887 45679999999999 9987 6666543321 12
Q ss_pred hhHHHHHHHHcCCeEEEEcCC
Q 008457 507 EPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 507 ~~~~~~~~~~~g~~~~~~~~~ 527 (564)
...+.+.++++||++.++...
T Consensus 303 ~~~~~~ll~~aGf~~~~~~~~ 323 (335)
T 2r3s_A 303 FAEYESMFSNAGFSHSQLHSL 323 (335)
T ss_dssp HHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHCCCCeeeEEEC
Confidence 456778888999999998754
No 353
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.13 E-value=9.7e-11 Score=108.04 Aligned_cols=102 Identities=12% Similarity=0.180 Sum_probs=84.1
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||||||.|.++..+. +..+|+|+|+++.+++.+++.....+.+..+..+|..... +.++||+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~-----~~~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP-----PAEAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC-----CCCBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC-----CCCCcchHHHH
Confidence 568899999999999998776 6889999999999999999987655677889999986532 45699999999
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEE
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
-++||+........+ ++.+.|+++|+++-.
T Consensus 176 k~lh~LE~q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 176 KLLPLLEREQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp SCHHHHHHHSTTHHH-HHHHHCBCSEEEEEE
T ss_pred HHHHHhhhhchhhHH-HHHHHhcCCCEEEEc
Confidence 999998544444444 888899999887754
No 354
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.13 E-value=9.1e-12 Score=116.18 Aligned_cols=144 Identities=16% Similarity=0.068 Sum_probs=80.4
Q ss_pred HHHHHHHHhcCC-CCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeec
Q 008457 361 AHLMAAVLARNP-TIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEW 438 (564)
Q Consensus 361 ~~~l~~~l~~~~-~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w 438 (564)
+..+.+++.... ...++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++|+..++. ++.+...|+
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~d~ 88 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-----VVDWAAADG 88 (215)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHH
T ss_pred HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-----ceEEEEcch
Confidence 445555555432 22578899999999998888887765 34999999999999999999887653 233332222
Q ss_pred CCCccchhhhh--hcCCCccEEEEeceeeCCCCh--------------------------HHHHHHHHHHhhccCCCCCC
Q 008457 439 GNRDHIEAIKE--ENNEGFEVILGTDVSYIPEAI--------------------------LPLFATAKELTASSNKSLRE 490 (564)
Q Consensus 439 ~~~~~~~~~~~--~~~~~fD~Ii~~d~~y~~~~~--------------------------~~l~~~~~~ll~~~~g~~~~ 490 (564)
.+ .+.. ...++||+|+++...+..... ..+++.+.++| +|+|
T Consensus 89 ~~-----~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG---- 158 (215)
T 4dzr_A 89 IE-----WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVL-ARGR---- 158 (215)
T ss_dssp HH-----HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGB-CSSS----
T ss_pred Hh-----hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHh-cCCC----
Confidence 21 1111 123799999986554332221 77888889999 9988
Q ss_pred CCCcE-EEEEEeeccCChhHHHHHHH--HcCCeEEEEc
Q 008457 491 DQQPA-FILCHIFRQVDEPSMLSAAT--QCGFRLVDKW 525 (564)
Q Consensus 491 ~~~~~-~~~~~~~r~~~~~~~~~~~~--~~g~~~~~~~ 525 (564)
. +++... ......+.+.+. +.||...+++
T Consensus 159 ----~l~~~~~~--~~~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 159 ----AGVFLEVG--HNQADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp ----EEEEEECT--TSCHHHHHHHTGGGGGGTEECCEE
T ss_pred ----eEEEEEEC--CccHHHHHHHHHHhhcCCceEEEE
Confidence 7 444433 223346777778 8899777665
No 355
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.13 E-value=5.6e-10 Score=115.46 Aligned_cols=118 Identities=14% Similarity=0.169 Sum_probs=91.5
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCcee
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
..+...++.+|||+|||+|..+..+++..++.+|+++|+++.+++.++++....+.++.+.++|+..... .+++++||
T Consensus 240 ~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~--~~~~~~fD 317 (429)
T 1sqg_A 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ--WCGEQQFD 317 (429)
T ss_dssp HHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHH--HHTTCCEE
T ss_pred HHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchh--hcccCCCC
Confidence 3455678899999999999999999999777899999999999999998876555568888998865321 13457899
Q ss_pred EEEEc------ccccCCCh-------hH-------HHHHHHHHHhccCCCeEEEEEecCC
Q 008457 149 IVTMV------FVLSAVSP-------EK-------MSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 149 ~V~~~------~vl~~~~~-------~~-------~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
+|++. .++++.+. ++ ...++.++.++|||||.+++++...
T Consensus 318 ~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 318 RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred EEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 99972 23444331 11 2578999999999999999986543
No 356
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.13 E-value=3e-10 Score=109.27 Aligned_cols=128 Identities=11% Similarity=0.054 Sum_probs=90.0
Q ss_pred CCCCCCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhh
Q 008457 372 PTIVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE 450 (564)
Q Consensus 372 ~~~~~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~ 450 (564)
..+.++.+|||+|||+|+++.+++++ .+.+|+++|+++++++.+++|+...+. .++.+..-|-. .+
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl----~~v~~v~gDa~---------~l 184 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV----DGVNVITGDET---------VI 184 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC----CSEEEEESCGG---------GG
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC----CCeEEEECchh---------hC
Confidence 34568999999999998777665554 567999999999999999999988765 35666543321 12
Q ss_pred cCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCCh--hHHHHHHHHcCCeEEEEc
Q 008457 451 NNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE--PSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 451 ~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~--~~~~~~~~~~g~~~~~~~ 525 (564)
++++||+|+.+.. ......+++.+.++| +|+| ++++......... ... ......||++..+.
T Consensus 185 ~d~~FDvV~~~a~---~~d~~~~l~el~r~L-kPGG--------~Lvv~~~~~~r~~l~~~v-~~~~~~gf~~~~~~ 248 (298)
T 3fpf_A 185 DGLEFDVLMVAAL---AEPKRRVFRNIHRYV-DTET--------RIIYRTYTGMRAILYAPV-SDDDITGFRRAGVV 248 (298)
T ss_dssp GGCCCSEEEECTT---CSCHHHHHHHHHHHC-CTTC--------EEEEEECCGGGGGSSCCC-CTGGGTTEEEEEEE
T ss_pred CCCCcCEEEECCC---ccCHHHHHHHHHHHc-CCCc--------EEEEEcCcchhhhccccC-ChhhhhhhhheeEE
Confidence 3579999997554 477889999999999 9988 7776543321100 000 11134588877665
No 357
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.13 E-value=4.3e-10 Score=110.18 Aligned_cols=109 Identities=13% Similarity=0.120 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccc-----cCCCeeEEEecCCcccccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
..+.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++... ...+++++++|+... + +...++||
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~-l--~~~~~~fD 165 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY-V--RKFKNEFD 165 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH-G--GGCSSCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH-H--hhCCCCce
Confidence 456899999999999999999876678999999999999999987632 136899999997542 1 11357899
Q ss_pred EEEEcccccCCCh-h--HHHHHHHHHHhccCCCeEEEEEe
Q 008457 149 IVTMVFVLSAVSP-E--KMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 149 ~V~~~~vl~~~~~-~--~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
+|++...-+++.. . ....++++++++|+|||++++..
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998543221210 1 12679999999999999999863
No 358
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.13 E-value=2e-10 Score=109.68 Aligned_cols=107 Identities=17% Similarity=0.106 Sum_probs=85.6
Q ss_pred hhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCC
Q 008457 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPS 145 (564)
Q Consensus 68 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~ 145 (564)
...+...++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++....+ .++++...|+.... ++++
T Consensus 84 ~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~ 157 (248)
T 2yvl_A 84 ALKLNLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE----VPEG 157 (248)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC----CCTT
T ss_pred HHhcCCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc----cCCC
Confidence 34445568899999999999999999998 7899999999999999998765433 57888888886421 1457
Q ss_pred ceeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 146 SIDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 146 ~fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
+||+|+++ .+ ++..+++++.++|+|||.+++....
T Consensus 158 ~~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 158 IFHAAFVD-----VR--EPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp CBSEEEEC-----SS--CGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred cccEEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 89999983 32 4457899999999999999997653
No 359
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.13 E-value=5.8e-10 Score=106.31 Aligned_cols=124 Identities=15% Similarity=0.076 Sum_probs=89.4
Q ss_pred echhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEe
Q 008457 357 LWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 436 (564)
Q Consensus 357 ~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l 436 (564)
.|..+......+..+ +.++.+|||||||+|.++..++..+. +|+++|+|+.+++.++++... .++.+...
T Consensus 39 ~~~~~~~~~~~~~~~--~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~-------~~~~~~~~ 108 (245)
T 3ggd_A 39 VERAVVVDLPRFELL--FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA-------ANISYRLL 108 (245)
T ss_dssp GGGTHHHHHHHHTTT--SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC-------TTEEEEEC
T ss_pred hHHHHHHHHHHHhhc--cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc-------cCceEEEC
Confidence 344444444444433 45788999999999988888877665 899999999999999998621 35777776
Q ss_pred ecCCCccchhhhhhcCCCccEEEEeceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 008457 437 EWGNRDHIEAIKEENNEGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHI 501 (564)
Q Consensus 437 ~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~ 501 (564)
|..+......+. ....||+|++..++++.. ....+++.+.++| +|+| .++++..
T Consensus 109 d~~~~~~~~~~~--~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~ 164 (245)
T 3ggd_A 109 DGLVPEQAAQIH--SEIGDANIYMRTGFHHIPVEKRELLGQSLRILL-GKQG--------AMYLIEL 164 (245)
T ss_dssp CTTCHHHHHHHH--HHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHH-TTTC--------EEEEEEE
T ss_pred cccccccccccc--cccCccEEEEcchhhcCCHHHHHHHHHHHHHHc-CCCC--------EEEEEeC
Confidence 665432111110 012599999999998877 8899999999999 9988 7666644
No 360
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.13 E-value=2.1e-10 Score=110.65 Aligned_cols=147 Identities=16% Similarity=0.094 Sum_probs=97.7
Q ss_pred echhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEe
Q 008457 357 LWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 436 (564)
Q Consensus 357 ~W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l 436 (564)
+-.++..|...+.......++.+|||+|||||.++..++..++.+|+++|+++.|++.+.++ . .++...
T Consensus 66 vsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~----~-----~rv~~~-- 134 (291)
T 3hp7_A 66 VSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ----D-----DRVRSM-- 134 (291)
T ss_dssp SSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT----C-----TTEEEE--
T ss_pred ccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----C-----ccccee--
Confidence 34556777777776654557889999999999999888888788999999999999874432 1 112111
Q ss_pred ecCCCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee-----cc-------
Q 008457 437 EWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF-----RQ------- 504 (564)
Q Consensus 437 ~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~-----r~------- 504 (564)
.-.+..... ...++..+||+|+ +|+.+. ++..++..+.++| +|+| .+++.... +.
T Consensus 135 ~~~ni~~l~-~~~l~~~~fD~v~-~d~sf~--sl~~vL~e~~rvL-kpGG--------~lv~lvkPqfe~~~~~~~~~G~ 201 (291)
T 3hp7_A 135 EQYNFRYAE-PVDFTEGLPSFAS-IDVSFI--SLNLILPALAKIL-VDGG--------QVVALVKPQFEAGREQIGKNGI 201 (291)
T ss_dssp CSCCGGGCC-GGGCTTCCCSEEE-ECCSSS--CGGGTHHHHHHHS-CTTC--------EEEEEECGGGTSCGGGCC-CCC
T ss_pred cccCceecc-hhhCCCCCCCEEE-EEeeHh--hHHHHHHHHHHHc-CcCC--------EEEEEECcccccChhhcCCCCc
Confidence 111100010 0123334599987 476665 5799999999999 9988 66665222 10
Q ss_pred --------CChhHHHHHHHHcCCeEEEEcCC
Q 008457 505 --------VDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 505 --------~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
.....+.+.+.++||.+..+...
T Consensus 202 vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 202 VRESSIHEKVLETVTAFAVDYGFSVKGLDFS 232 (291)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHHHHCCCEEEEEEEC
Confidence 11235667788899999988644
No 361
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.12 E-value=2.7e-10 Score=117.74 Aligned_cols=144 Identities=13% Similarity=0.149 Sum_probs=105.2
Q ss_pred HHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCC
Q 008457 361 AHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGN 440 (564)
Q Consensus 361 ~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~ 440 (564)
...+++.+.......++.+|||+|||+|.+...++..+ .+|+++|+++.+++.++++ +.. .....+..
T Consensus 92 ~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g-~~v~gvD~s~~~~~~a~~~----~~~-------~~~~~~~~ 159 (416)
T 4e2x_A 92 FAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAG-VRHLGFEPSSGVAAKAREK----GIR-------VRTDFFEK 159 (416)
T ss_dssp HHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTT-CEEEEECCCHHHHHHHHTT----TCC-------EECSCCSH
T ss_pred HHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcC-CcEEEECCCHHHHHHHHHc----CCC-------cceeeech
Confidence 34566667666666678899999999998777777654 4899999999999988876 221 11111111
Q ss_pred CccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee------------------
Q 008457 441 RDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF------------------ 502 (564)
Q Consensus 441 ~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~------------------ 502 (564)
.....+ ++.+++||+|++..++++..+...+++.+.++| +|+| .+++..+.
T Consensus 160 -~~~~~l-~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~ 228 (416)
T 4e2x_A 160 -ATADDV-RRTEGPANVIYAANTLCHIPYVQSVLEGVDALL-APDG--------VFVFEDPYLGDIVAKTSFDQIFDEHF 228 (416)
T ss_dssp -HHHHHH-HHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHE-EEEE--------EEEEEEECHHHHHHHTCGGGCSTTCC
T ss_pred -hhHhhc-ccCCCCEEEEEECChHHhcCCHHHHHHHHHHHc-CCCe--------EEEEEeCChHHhhhhcchhhhhhhhh
Confidence 111111 234679999999999999999999999999999 9988 77776542
Q ss_pred ccCChhHHHHHHHHcCCeEEEEcCC
Q 008457 503 RQVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 503 r~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
+..+...+...++++||++.++...
T Consensus 229 ~~~s~~~l~~ll~~aGf~~~~~~~~ 253 (416)
T 4e2x_A 229 FLFSATSVQGMAQRCGFELVDVQRL 253 (416)
T ss_dssp EECCHHHHHHHHHHTTEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHcCCEEEEEEEc
Confidence 1123356788889999999998754
No 362
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.12 E-value=1e-09 Score=110.95 Aligned_cols=133 Identities=12% Similarity=0.109 Sum_probs=103.9
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 451 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~ 451 (564)
...++.+|||+|||+|.++..++... ..+++++|+ +.+++.+++++..++.. +++.+...|..+. +.
T Consensus 187 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-------~~- 254 (359)
T 1x19_A 187 KLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVA---DRMRGIAVDIYKE-------SY- 254 (359)
T ss_dssp CCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCT---TTEEEEECCTTTS-------CC-
T ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCC---CCEEEEeCccccC-------CC-
Confidence 34577899999999998888887765 459999999 99999999999887763 5688887776543 11
Q ss_pred CCCccEEEEeceeeCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee----------------------cc---
Q 008457 452 NEGFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIF----------------------RQ--- 504 (564)
Q Consensus 452 ~~~fD~Ii~~d~~y~~~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~----------------------r~--- 504 (564)
..+|+|++..++++..+ ...+++.+.++| +|+| .+++.... +.
T Consensus 255 -~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 324 (359)
T 1x19_A 255 -PEADAVLFCRILYSANEQLSTIMCKKAFDAM-RSGG--------RLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLG 324 (359)
T ss_dssp -CCCSEEEEESCGGGSCHHHHHHHHHHHHTTC-CTTC--------EEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCC
T ss_pred -CCCCEEEEechhccCCHHHHHHHHHHHHHhc-CCCC--------EEEEEecccCCCCCchHHHHHHHHHhcCCCCcccC
Confidence 23499999999988766 889999999999 9988 77665421 11
Q ss_pred -CChhHHHHHHHHcCCeEEEEcCC
Q 008457 505 -VDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 505 -~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
.+..++.+.++++||++.++...
T Consensus 325 ~~t~~e~~~ll~~aGf~~v~~~~~ 348 (359)
T 1x19_A 325 FKEQARYKEILESLGYKDVTMVRK 348 (359)
T ss_dssp CCCGGGHHHHHHHHTCEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCceEEEEec
Confidence 34567888889999999988743
No 363
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.11 E-value=9.7e-10 Score=101.85 Aligned_cols=124 Identities=19% Similarity=0.195 Sum_probs=85.4
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
..++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++|+..++. ++.+...|+.+ + +.
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~d~~~---------~-~~ 111 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG-----KFKVFIGDVSE---------F-NS 111 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-----SEEEEESCGGG---------C-CC
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-----CEEEEECchHH---------c-CC
Confidence 347889999999999888888777667899999999999999999988764 35555544432 1 24
Q ss_pred CccEEEEeceeeCCC---ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 454 GFEVILGTDVSYIPE---AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~---~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
+||+|+++.+ |+.. ....+++.+.+++ | .+++...........+.+.+.+.|++++.+.
T Consensus 112 ~~D~v~~~~p-~~~~~~~~~~~~l~~~~~~l----~--------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 173 (207)
T 1wy7_A 112 RVDIVIMNPP-FGSQRKHADRPFLLKAFEIS----D--------VVYSIHLAKPEVRRFIEKFSWEHGFVVTHRL 173 (207)
T ss_dssp CCSEEEECCC-CSSSSTTTTHHHHHHHHHHC----S--------EEEEEEECCHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCCEEEEcCC-CccccCCchHHHHHHHHHhc----C--------cEEEEEeCCcCCHHHHHHHHHHCCCeEEEEE
Confidence 8999986544 4432 3445666666655 3 3444432222223345667788999988775
No 364
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.11 E-value=2.2e-10 Score=105.22 Aligned_cols=104 Identities=16% Similarity=0.170 Sum_probs=76.0
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCC---------cEEEEEeCChHHHHHHHhcccccCCCeeEE-EecCCccccc----
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPD---------VFVYACDFSPRAVNLVMTHKDFTETRVSTF-VCDLISDDLS---- 139 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~---------~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~-~~d~~~~~~~---- 139 (564)
.++.+|||+|||+|.++..+++..+. .+|+|+|+|+.+ ...++++. .+|+......
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------cCCCCeEEEeccCCCHHHHHHHH
Confidence 57899999999999999999998643 799999999832 12357777 7777543210
Q ss_pred CCCCCCceeEEEEcccccCCC--hhHH-------HHHHHHHHhccCCCeEEEEEecC
Q 008457 140 RQISPSSIDIVTMVFVLSAVS--PEKM-------SLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 140 ~~~~~~~fD~V~~~~vl~~~~--~~~~-------~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
..+++++||+|++...+++.. ..+. ..+++++.++|||||.+++..+.
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 013456899999976554321 0122 47899999999999999997654
No 365
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.11 E-value=2.5e-10 Score=117.57 Aligned_cols=117 Identities=11% Similarity=0.125 Sum_probs=87.6
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCce
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSI 147 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~f 147 (564)
..+...++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.++++....+..+.+.++|+.... ....++|
T Consensus 95 ~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~---~~~~~~F 171 (464)
T 3m6w_A 95 VLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALA---EAFGTYF 171 (464)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHH---HHHCSCE
T ss_pred HhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhh---hhccccC
Confidence 445567899999999999999999998854 379999999999999999987655544888888875432 1135789
Q ss_pred eEEEEc------ccccCCC-------hhH-------HHHHHHHHHhccCCCeEEEEEecCC
Q 008457 148 DIVTMV------FVLSAVS-------PEK-------MSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 148 D~V~~~------~vl~~~~-------~~~-------~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
|+|++. .++.+-+ +++ ...+|.++.++|||||.|++++-..
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 999962 1222221 112 3779999999999999999876443
No 366
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.10 E-value=8.5e-10 Score=112.94 Aligned_cols=111 Identities=14% Similarity=0.070 Sum_probs=85.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCC---CeeEEEecCCcccccCCCCCCceeEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTET---RVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~---~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|+++....+. +++++++|+........-...+||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 478899999999999999999873 45899999999999999988765443 78999999854311000014689999
Q ss_pred EEccc---------ccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 151 TMVFV---------LSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 151 ~~~~v---------l~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
++.-- ..+. .....++.++.+.|+|||+++++...
T Consensus 298 i~dpP~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGAC--RGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp EECCSSTTTCSSSSSCCC--THHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECCCCCCCChhHHHHHH--HHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99632 1222 57788999999999999999987543
No 367
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.10 E-value=1.4e-10 Score=116.45 Aligned_cols=103 Identities=25% Similarity=0.235 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhccccc--CCCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~--~~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++++|||||||+|.++...++.+ ..+|+|+|.|+ +++.|++..... ..+|+++.+++....+ + ++||+|+
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l----p-e~~Dviv 154 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL----P-EQVDAIV 154 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC----S-SCEEEEE
T ss_pred cCCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC----C-ccccEEE
Confidence 468899999999999988777763 35899999986 788888765543 3679999999976543 3 6899999
Q ss_pred EcccccCCC-hhHHHHHHHHHHhccCCCeEEEE
Q 008457 152 MVFVLSAVS-PEKMSLVLQNIKKVLKPTGYVLF 183 (564)
Q Consensus 152 ~~~vl~~~~-~~~~~~~l~~~~r~LkpgG~lii 183 (564)
+...-..+. ...+..++....++|||||.++-
T Consensus 155 sE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 155 SEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred eecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 954433222 23577888889999999999875
No 368
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.09 E-value=1.6e-09 Score=109.89 Aligned_cols=109 Identities=11% Similarity=0.073 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||+|||+|.++..++.. +..|+++|+|+.+++.|+++....+....+.++|+..... .+ .+.||+|++.
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~--~~-~~~fD~Ii~d 287 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLR--GL-EGPFHHVLLD 287 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHH--TC-CCCEEEEEEC
T ss_pred cCCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHH--Hh-cCCCCEEEEC
Confidence 35899999999999999999987 5669999999999999999876555445677888754211 12 3349999996
Q ss_pred ccccCCC-------hhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 154 FVLSAVS-------PEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 154 ~vl~~~~-------~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
--...-+ ..+...++..+.++|+|||.+++.+..
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4321111 134568899999999999999976543
No 369
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.09 E-value=3.5e-10 Score=115.09 Aligned_cols=113 Identities=14% Similarity=0.094 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--C-CeeEEEecCCcccccCCCCCCceeEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--T-RVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~-~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
.++.+|||+|||+|.++..++..+ ..+|+++|+|+.+++.|+++....+ . +++++++|+........-...+||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 467899999999999999999862 2489999999999999998876444 2 79999999854211000124589999
Q ss_pred EEcccc-----cCCC--hhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 151 TMVFVL-----SAVS--PEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 151 ~~~~vl-----~~~~--~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
++.--. .+.. ......++..+.++|+|||.++++...
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 984322 1221 245667888999999999999987543
No 370
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.09 E-value=7.2e-10 Score=112.19 Aligned_cols=132 Identities=10% Similarity=0.033 Sum_probs=101.9
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
..++.+|||+|||+|.++..++... ..+++++|+ +.+++.+++|+..++.. .++.+...|+.+. ++
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--------~~- 247 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLS---DRVDVVEGDFFEP--------LP- 247 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCT---TTEEEEECCTTSC--------CS-
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCC---CceEEEeCCCCCC--------CC-
Confidence 4467899999999998887777765 458999999 99999999999887763 4688888777532 12
Q ss_pred CCccEEEEeceeeCCCCh--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEee--c----------------------cCC
Q 008457 453 EGFEVILGTDVSYIPEAI--LPLFATAKELTASSNKSLREDQQPAFILCHIF--R----------------------QVD 506 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~--~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~--r----------------------~~~ 506 (564)
..||+|++..++++.... ..+++.+.++| +|+| .+++.... . ..+
T Consensus 248 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 318 (360)
T 1tw3_A 248 RKADAIILSFVLLNWPDHDAVRILTRCAEAL-EPGG--------RILIHERDDLHENSFNEQFTELDLRMLVFLGGALRT 318 (360)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHTE-EEEE--------EEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCB
T ss_pred CCccEEEEcccccCCCHHHHHHHHHHHHHhc-CCCc--------EEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCC
Confidence 359999999999876654 58999999999 9987 77766433 1 012
Q ss_pred hhHHHHHHHHcCCeEEEEcCC
Q 008457 507 EPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 507 ~~~~~~~~~~~g~~~~~~~~~ 527 (564)
...+.+.+.++||+++++...
T Consensus 319 ~~e~~~ll~~aGf~~~~~~~~ 339 (360)
T 1tw3_A 319 REKWDGLAASAGLVVEEVRQL 339 (360)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEeC
Confidence 345677888999999998754
No 371
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.09 E-value=1.5e-10 Score=105.75 Aligned_cols=102 Identities=16% Similarity=0.208 Sum_probs=75.4
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCC----CC---CCc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQ----IS---PSS 146 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~----~~---~~~ 146 (564)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.. ...++.++++|+........ +. .++
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME----------EIAGVRFIRCDIFKETIFDDIDRALREEGIEK 91 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC----------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSS
T ss_pred CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc----------cCCCeEEEEccccCHHHHHHHHHHhhcccCCc
Confidence 67899999999999999999888 7899999999741 12478999999876432100 11 148
Q ss_pred eeEEEEcccccCCC---------hhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 147 IDIVTMVFVLSAVS---------PEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 147 fD~V~~~~vl~~~~---------~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
||+|++........ ......+++.+.++|||||.|++..+.
T Consensus 92 ~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 92 VDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 99999976433221 122457889999999999999987654
No 372
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.09 E-value=6.8e-10 Score=111.15 Aligned_cols=128 Identities=10% Similarity=0.099 Sum_probs=98.9
Q ss_pred CeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCcc
Q 008457 378 KKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFE 456 (564)
Q Consensus 378 ~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD 456 (564)
.+|||+|||+|.++..++... ..+++++|+ +.+++.+++++..+++. .++.+...|+.+. + +.+||
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--------~-~~~~D 235 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAG---ERVSLVGGDMLQE--------V-PSNGD 235 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHT---TSEEEEESCTTTC--------C-CSSCS
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCC---CcEEEecCCCCCC--------C-CCCCC
Confidence 899999999998887777664 459999999 99999999998776543 4678877776542 1 25799
Q ss_pred EEEEeceeeCCCChH--HHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----------------------cCChhHHH
Q 008457 457 VILGTDVSYIPEAIL--PLFATAKELTASSNKSLREDQQPAFILCHIFR-----------------------QVDEPSML 511 (564)
Q Consensus 457 ~Ii~~d~~y~~~~~~--~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-----------------------~~~~~~~~ 511 (564)
+|++..++++..... .+++.+.++| +|+| .+++..... ..+..++.
T Consensus 236 ~v~~~~vl~~~~~~~~~~~l~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 306 (334)
T 2ip2_A 236 IYLLSRIIGDLDEAASLRLLGNCREAM-AGDG--------RVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVV 306 (334)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHS-CTTC--------EEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHH
T ss_pred EEEEchhccCCCHHHHHHHHHHHHHhc-CCCC--------EEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHH
Confidence 999999998765444 9999999999 9988 777764321 11334667
Q ss_pred HHHHHcCCeEEEEcCC
Q 008457 512 SAATQCGFRLVDKWPS 527 (564)
Q Consensus 512 ~~~~~~g~~~~~~~~~ 527 (564)
+.++++||++.+++..
T Consensus 307 ~ll~~aGf~~~~~~~~ 322 (334)
T 2ip2_A 307 DLLGRGGFAVERIVDL 322 (334)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHCCCceeEEEEC
Confidence 7888999999998743
No 373
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.09 E-value=7.9e-11 Score=109.25 Aligned_cols=121 Identities=9% Similarity=0.053 Sum_probs=90.1
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++|+..++.. .+.+...|+.+.. +.++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~v~~~~~d~~~~~--------~~~~ 132 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE----NIEPVQSRVEEFP--------SEPP 132 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS----SEEEEECCTTTSC--------CCSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----CeEEEecchhhCC--------ccCC
Confidence 57899999999998887777653 569999999999999999999987752 3777777775431 2368
Q ss_pred ccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 455 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
||+|++.. ......+++.+.++| +|+| .+++...... ...+.+.+ + ||++.++.
T Consensus 133 ~D~i~~~~----~~~~~~~l~~~~~~L-~~gG--------~l~~~~~~~~--~~~~~~~~-~-g~~~~~~~ 186 (207)
T 1jsx_A 133 FDGVISRA----FASLNDMVSWCHHLP-GEQG--------RFYALKGQMP--EDEIALLP-E-EYQVESVV 186 (207)
T ss_dssp EEEEECSC----SSSHHHHHHHHTTSE-EEEE--------EEEEEESSCC--HHHHHTSC-T-TEEEEEEE
T ss_pred cCEEEEec----cCCHHHHHHHHHHhc-CCCc--------EEEEEeCCCc--hHHHHHHh-c-CCceeeee
Confidence 99999644 366889999999999 9988 7777643322 22233332 2 89888754
No 374
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.08 E-value=6.4e-11 Score=111.61 Aligned_cols=146 Identities=18% Similarity=0.153 Sum_probs=95.0
Q ss_pred chhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEee
Q 008457 358 WESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 437 (564)
Q Consensus 358 W~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~ 437 (564)
..++..|...+........+++|||||||+|.++..++..++.+|+++|+++.+++.+++|....... .. ..+.
T Consensus 19 srg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~---~~---~~~~ 92 (232)
T 3opn_A 19 SRGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVM---EQ---FNFR 92 (232)
T ss_dssp STTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEE---CS---CCGG
T ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcccccc---cc---ceEE
Confidence 34566777777665555578899999999998888888877679999999999999877653221100 00 0011
Q ss_pred cCCCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------
Q 008457 438 WGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-------------- 503 (564)
Q Consensus 438 w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-------------- 503 (564)
+.... .+....||.+ .+|+++.. +..+++.+.++| +|+| .+++.....
T Consensus 93 ~~~~~------~~~~~~~d~~-~~D~v~~~--l~~~l~~i~rvL-kpgG--------~lv~~~~p~~e~~~~~~~~~G~~ 154 (232)
T 3opn_A 93 NAVLA------DFEQGRPSFT-SIDVSFIS--LDLILPPLYEIL-EKNG--------EVAALIKPQFEAGREQVGKNGII 154 (232)
T ss_dssp GCCGG------GCCSCCCSEE-EECCSSSC--GGGTHHHHHHHS-CTTC--------EEEEEECHHHHSCHHHHC-CCCC
T ss_pred EeCHh------HcCcCCCCEE-EEEEEhhh--HHHHHHHHHHhc-cCCC--------EEEEEECcccccCHHHhCcCCee
Confidence 11111 1122235654 45666543 488999999999 9988 666652210
Q ss_pred ------cCChhHHHHHHHHcCCeEEEEcCC
Q 008457 504 ------QVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 504 ------~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
......+.+.+.++||++..+...
T Consensus 155 ~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 155 RDPKVHQMTIEKVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred cCcchhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence 012235778888999999988543
No 375
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.08 E-value=4.3e-10 Score=104.52 Aligned_cols=111 Identities=13% Similarity=0.007 Sum_probs=83.0
Q ss_pred HHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccc
Q 008457 365 AAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 444 (564)
Q Consensus 365 ~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~ 444 (564)
...+.......++.+|||+|||+|.++..++.. ..+|+++|+++.+++.+++|+..++. .++.+...|+.+..
T Consensus 66 ~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~----~~v~~~~~d~~~~~-- 138 (210)
T 3lbf_A 66 VARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDL----HNVSTRHGDGWQGW-- 138 (210)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTC----CSEEEEESCGGGCC--
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCC----CceEEEECCcccCC--
Confidence 333343334557889999999999887777766 67999999999999999999998775 35777766654321
Q ss_pred hhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 445 EAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 445 ~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
...++||+|++..++.+.. +.+.++| +|+| .+++....
T Consensus 139 -----~~~~~~D~i~~~~~~~~~~------~~~~~~L-~pgG--------~lv~~~~~ 176 (210)
T 3lbf_A 139 -----QARAPFDAIIVTAAPPEIP------TALMTQL-DEGG--------ILVLPVGE 176 (210)
T ss_dssp -----GGGCCEEEEEESSBCSSCC------THHHHTE-EEEE--------EEEEEECS
T ss_pred -----ccCCCccEEEEccchhhhh------HHHHHhc-ccCc--------EEEEEEcC
Confidence 1246899999887765543 2578999 9988 77777665
No 376
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.07 E-value=1.9e-10 Score=112.07 Aligned_cols=89 Identities=24% Similarity=0.271 Sum_probs=70.3
Q ss_pred hHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccC
Q 008457 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSR 140 (564)
Q Consensus 63 ~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~ 140 (564)
+...+.+.+...++.+|||||||+|.++..|++. +.+|+|+|+|+.+++.++++....+ .+++++++|+....+
T Consensus 16 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~-- 91 (285)
T 1zq9_A 16 IINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL-- 91 (285)
T ss_dssp HHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC--
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc--
Confidence 3455555666678899999999999999999998 5799999999999999998765332 478999999965432
Q ss_pred CCCCCceeEEEEcccccCC
Q 008457 141 QISPSSIDIVTMVFVLSAV 159 (564)
Q Consensus 141 ~~~~~~fD~V~~~~vl~~~ 159 (564)
.+||+|+++..+++.
T Consensus 92 ----~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 92 ----PFFDTCVANLPYQIS 106 (285)
T ss_dssp ----CCCSEEEEECCGGGH
T ss_pred ----hhhcEEEEecCcccc
Confidence 279999997655443
No 377
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.07 E-value=2.2e-09 Score=99.60 Aligned_cols=132 Identities=15% Similarity=0.150 Sum_probs=85.8
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
+.++.+|||||||+|.++..++... ..+|+++|+|+.+++.+.++.... .++....-|... .....++ .
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~------~~v~~~~~d~~~---~~~~~~~-~ 124 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER------NNIIPLLFDASK---PWKYSGI-V 124 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC------SSEEEECSCTTC---GGGTTTT-C
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC------CCeEEEEcCCCC---chhhccc-c
Confidence 4478899999999998877777654 468999999999987776655432 234333222221 1111122 3
Q ss_pred CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc----CChhHHH----HHHHHcCCeEEEE
Q 008457 453 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ----VDEPSML----SAATQCGFRLVDK 524 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~----~~~~~~~----~~~~~~g~~~~~~ 524 (564)
++||+|++. + ..+.....+++.+.++| +|+| .++++.+.+. ......+ +.+++. |++.+.
T Consensus 125 ~~fD~V~~~-~-~~~~~~~~~l~~~~r~L-kpgG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~ 192 (210)
T 1nt2_A 125 EKVDLIYQD-I-AQKNQIEILKANAEFFL-KEKG--------EVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKH 192 (210)
T ss_dssp CCEEEEEEC-C-CSTTHHHHHHHHHHHHE-EEEE--------EEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEE
T ss_pred cceeEEEEe-c-cChhHHHHHHHHHHHHh-CCCC--------EEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeee
Confidence 689999865 3 33333455689999999 9988 8888764432 2223333 336777 999988
Q ss_pred cCC
Q 008457 525 WPS 527 (564)
Q Consensus 525 ~~~ 527 (564)
...
T Consensus 193 ~~~ 195 (210)
T 1nt2_A 193 GSL 195 (210)
T ss_dssp EEC
T ss_pred ecC
Confidence 744
No 378
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.07 E-value=8.6e-10 Score=105.60 Aligned_cols=97 Identities=18% Similarity=0.139 Sum_probs=73.1
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||+|||+|.++..++.. +.+|+++|+|+.+++.+++|+..++. ++.+...|..+. + .+++
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~-----~v~~~~~d~~~~-------~-~~~~ 105 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNL-----KIEFLQGDVLEI-------A-FKNE 105 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC-----CCEEEESCGGGC-------C-CCSC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCC-----ceEEEECChhhc-------c-cCCC
Confidence 46789999999999887777765 45899999999999999999887653 355555554322 1 1358
Q ss_pred ccEEEEe-cee--eCCCChHHHHHHHHHHhhccCC
Q 008457 455 FEVILGT-DVS--YIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 455 fD~Ii~~-d~~--y~~~~~~~l~~~~~~ll~~~~g 486 (564)
||+|++. ..+ +.......+++.+.++| +|+|
T Consensus 106 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L-~pgG 139 (252)
T 1wzn_A 106 FDAVTMFFSTIMYFDEEDLRKLFSKVAEAL-KPGG 139 (252)
T ss_dssp EEEEEECSSGGGGSCHHHHHHHHHHHHHHE-EEEE
T ss_pred ccEEEEcCCchhcCCHHHHHHHHHHHHHHc-CCCe
Confidence 9999975 222 22346788999999999 9987
No 379
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.06 E-value=2.5e-10 Score=102.21 Aligned_cols=109 Identities=19% Similarity=0.163 Sum_probs=79.5
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++..++..+. +|+++|+++.+++.+++|+..++. ++.+...|+.+. .... +...++|
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~--~~~~-~~~~~~~ 111 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL-----GARVVALPVEVF--LPEA-KAQGERF 111 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC-----CCEEECSCHHHH--HHHH-HHTTCCE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC-----ceEEEeccHHHH--HHhh-hccCCce
Confidence 678999999999988877777655 499999999999999999998764 345544443211 1111 1123489
Q ss_pred cEEEEeceeeCCCChHHHHHHHH--HHhhccCCCCCCCCCcEEEEEEeecc
Q 008457 456 EVILGTDVSYIPEAILPLFATAK--ELTASSNKSLREDQQPAFILCHIFRQ 504 (564)
Q Consensus 456 D~Ii~~d~~y~~~~~~~l~~~~~--~ll~~~~g~~~~~~~~~~~~~~~~r~ 504 (564)
|+|++..+ |+ ...+.+++.+. ++| +|+| .++++...+.
T Consensus 112 D~i~~~~~-~~-~~~~~~~~~~~~~~~L-~~gG--------~~~~~~~~~~ 151 (171)
T 1ws6_A 112 TVAFMAPP-YA-MDLAALFGELLASGLV-EAGG--------LYVLQHPKDL 151 (171)
T ss_dssp EEEEECCC-TT-SCTTHHHHHHHHHTCE-EEEE--------EEEEEEETTS
T ss_pred EEEEECCC-Cc-hhHHHHHHHHHhhccc-CCCc--------EEEEEeCCcc
Confidence 99987654 55 67788888888 899 9988 7877766554
No 380
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.06 E-value=7.1e-10 Score=106.56 Aligned_cols=130 Identities=17% Similarity=0.222 Sum_probs=96.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++.+|||+|||+|.++..++..+ ..+|+++|+++.+++.++++....+ .+++++++|.... .+.+.||.|+
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~-----~~~~~~D~Vi 197 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF-----PGENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC-----CCCSCEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHh-----ccccCCCEEE
Confidence 689999999999999999999884 4689999999999999998875443 5689999998642 1467899999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCceeeccCHHHHHHHHHhC
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTRAFYFSNDFLTSLFKEN 231 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 231 (564)
++... ....++..+.++|||||++.+.++...... .....+.+.+..++.
T Consensus 198 ~~~p~------~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~------------------------~~~~~e~i~~~~~~~ 247 (278)
T 3k6r_A 198 MGYVV------RTHEFIPKALSIAKDGAIIHYHNTVPEKLM------------------------PREPFETFKRITKEY 247 (278)
T ss_dssp ECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGT------------------------TTTTHHHHHHHHHHT
T ss_pred ECCCC------cHHHHHHHHHHHcCCCCEEEEEeeeccccc------------------------chhHHHHHHHHHHHc
Confidence 76421 123578888899999999877544321100 001356778889999
Q ss_pred CCcEEEee
Q 008457 232 GFDVEELG 239 (564)
Q Consensus 232 Gf~~~~~~ 239 (564)
|+++....
T Consensus 248 g~~v~~~~ 255 (278)
T 3k6r_A 248 GYDVEKLN 255 (278)
T ss_dssp TCEEEEEE
T ss_pred CCcEEEEE
Confidence 99875543
No 381
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.06 E-value=9.3e-10 Score=98.92 Aligned_cols=141 Identities=11% Similarity=0.129 Sum_probs=94.5
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhc-C-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEe
Q 008457 359 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 436 (564)
Q Consensus 359 ~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~-~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l 436 (564)
.+...+.+.+.......++.+|||+|||+|.++..++.. + ..+|+++|+++ +++. .++.+...
T Consensus 5 r~~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------~~~~~~~~ 69 (180)
T 1ej0_A 5 RAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------VGVDFLQG 69 (180)
T ss_dssp HHHHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------------TTEEEEES
T ss_pred hHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------------CcEEEEEc
Confidence 344555666655444557889999999999888877776 3 37999999998 6432 34666666
Q ss_pred ecCCCccchhhhh-hcCCCccEEEEeceeeCCCCh-----------HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc
Q 008457 437 EWGNRDHIEAIKE-ENNEGFEVILGTDVSYIPEAI-----------LPLFATAKELTASSNKSLREDQQPAFILCHIFRQ 504 (564)
Q Consensus 437 ~w~~~~~~~~~~~-~~~~~fD~Ii~~d~~y~~~~~-----------~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~ 504 (564)
|+.+....+.+.. +++++||+|++..+++..... ..+++.+.++| +|+| .+++.....
T Consensus 70 d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L-~~gG--------~l~~~~~~~- 139 (180)
T 1ej0_A 70 DFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVL-APGG--------SFVVKVFQG- 139 (180)
T ss_dssp CTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHE-EEEE--------EEEEEEESS-
T ss_pred ccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHc-CCCc--------EEEEEEecC-
Confidence 6654321111111 456799999987776655554 78999999999 9988 777654433
Q ss_pred CChhHHHHHHHHcCCeEEEEc
Q 008457 505 VDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 505 ~~~~~~~~~~~~~g~~~~~~~ 525 (564)
.....+.+.+.+. |...++.
T Consensus 140 ~~~~~~~~~~~~~-~~~~~~~ 159 (180)
T 1ej0_A 140 EGFDEYLREIRSL-FTKVKVR 159 (180)
T ss_dssp TTHHHHHHHHHHH-EEEEEEE
T ss_pred CcHHHHHHHHHHh-hhhEEee
Confidence 3334566666664 7766665
No 382
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.06 E-value=4.9e-10 Score=112.58 Aligned_cols=109 Identities=19% Similarity=0.276 Sum_probs=84.7
Q ss_pred HHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccc
Q 008457 365 AAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 444 (564)
Q Consensus 365 ~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~ 444 (564)
.+.+.......++.+|||||||+|.++..++..+..+|+++|+++ +++.+++++..|++. .++.+...|+.+..
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~---~~v~~~~~d~~~~~-- 112 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLT---DRIVVIPGKVEEVS-- 112 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCT---TTEEEEESCTTTCC--
T ss_pred HHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCC---CcEEEEEcchhhCC--
Confidence 445555555568899999999999888888777777999999996 889999999998874 56787777665431
Q ss_pred hhhhhhcCCCccEEEEeceeeC--CCChHHHHHHHHHHhhccCC
Q 008457 445 EAIKEENNEGFEVILGTDVSYI--PEAILPLFATAKELTASSNK 486 (564)
Q Consensus 445 ~~~~~~~~~~fD~Ii~~d~~y~--~~~~~~l~~~~~~ll~~~~g 486 (564)
+ +++||+|++..+.++ .+.....+..+.++| +|+|
T Consensus 113 -----~-~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~L-kpgG 149 (348)
T 2y1w_A 113 -----L-PEQVDIIISEPMGYMLFNERMLESYLHAKKYL-KPSG 149 (348)
T ss_dssp -----C-SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGE-EEEE
T ss_pred -----C-CCceeEEEEeCchhcCChHHHHHHHHHHHhhc-CCCe
Confidence 1 258999998877765 345667777888999 9988
No 383
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.05 E-value=1.1e-09 Score=110.73 Aligned_cols=133 Identities=9% Similarity=0.155 Sum_probs=100.7
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
...+|||+|||+|.++..++... ..+|+++|+ +.+++.+++++...+.. +++.+...|..+... +++ ++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~~~-----~~p-~~ 248 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGS---ERIHGHGANLLDRDV-----PFP-TG 248 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTG---GGEEEEECCCCSSSC-----CCC-CC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcc---cceEEEEccccccCC-----CCC-CC
Confidence 56799999999998887777754 459999999 99999999998876653 578888877654310 122 58
Q ss_pred ccEEEEeceeeCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec----------------------------c
Q 008457 455 FEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFR----------------------------Q 504 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r----------------------------~ 504 (564)
||+|++..++++..+ ...+++.+.+.| +|+| .+++..... .
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (363)
T 3dp7_A 249 FDAVWMSQFLDCFSEEEVISILTRVAQSI-GKDS--------KVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKM 319 (363)
T ss_dssp CSEEEEESCSTTSCHHHHHHHHHHHHHHC-CTTC--------EEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCEEEEechhhhCCHHHHHHHHHHHHHhc-CCCc--------EEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcc
Confidence 999999999986554 468899999999 9988 777654321 1
Q ss_pred CChhHHHHHHHHcCCeEEEEcCC
Q 008457 505 VDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 505 ~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
.+..++.+.++++||+++++...
T Consensus 320 ~t~~e~~~ll~~AGf~~v~~~~~ 342 (363)
T 3dp7_A 320 FHSDDLIRCIENAGLEVEEIQDN 342 (363)
T ss_dssp CCHHHHHHHHHTTTEEESCCCCC
T ss_pred cCHHHHHHHHHHcCCeEEEEEeC
Confidence 13456778888899999887743
No 384
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.05 E-value=1.1e-09 Score=104.55 Aligned_cols=132 Identities=11% Similarity=0.054 Sum_probs=94.9
Q ss_pred HHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchh
Q 008457 367 VLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEA 446 (564)
Q Consensus 367 ~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~ 446 (564)
++.......++.+|||+|||+|.++..++.. ..+|+++|+++.+++.+++|+..+++. .++.+...|+.+..
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~~~---- 153 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLG---KNVKFFNVDFKDAE---- 153 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCC---TTEEEECSCTTTSC----
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC---CcEEEEEcChhhcc----
Confidence 3443344557889999999999888877777 779999999999999999999887653 45666655554321
Q ss_pred hhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 447 IKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 447 ~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
....+||+|++ +......+++.+.++| +|+| .+++....... ...+.+.+.+. |...+++
T Consensus 154 ---~~~~~~D~v~~-----~~~~~~~~l~~~~~~L-~~gG--------~l~~~~~~~~~-~~~~~~~l~~~-f~~~~~~ 213 (248)
T 2yvl_A 154 ---VPEGIFHAAFV-----DVREPWHYLEKVHKSL-MEGA--------PVGFLLPTANQ-VIKLLESIENY-FGNLEVV 213 (248)
T ss_dssp ---CCTTCBSEEEE-----CSSCGGGGHHHHHHHB-CTTC--------EEEEEESSHHH-HHHHHHHSTTT-EEEEEEE
T ss_pred ---cCCCcccEEEE-----CCcCHHHHHHHHHHHc-CCCC--------EEEEEeCCHHH-HHHHHHHHHhh-CCcceEE
Confidence 13458999986 3346678899999999 9988 77777664322 22455666555 7666655
No 385
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.05 E-value=1.4e-09 Score=109.68 Aligned_cols=136 Identities=13% Similarity=0.096 Sum_probs=103.6
Q ss_pred cCCCCCC-CCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhh
Q 008457 370 RNPTIVA-GKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAI 447 (564)
Q Consensus 370 ~~~~~~~-~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~ 447 (564)
......+ +.+|||+|||+|.++..++... ..+++++|+ +.+++.+++++..++.. +++.+...|+.+..
T Consensus 172 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~~----- 242 (352)
T 3mcz_A 172 SELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLG---GRVEFFEKNLLDAR----- 242 (352)
T ss_dssp HTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCG---GGEEEEECCTTCGG-----
T ss_pred HhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCC---CceEEEeCCcccCc-----
Confidence 3334445 7899999999998888777765 459999999 89999999999887653 56888888776431
Q ss_pred hhhcCCCccEEEEeceeeCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee-----------------------
Q 008457 448 KEENNEGFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIF----------------------- 502 (564)
Q Consensus 448 ~~~~~~~fD~Ii~~d~~y~~~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~----------------------- 502 (564)
...+..||+|++..++++..+ ...+++.+.++| +|+| .+++....
T Consensus 243 -~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (352)
T 3mcz_A 243 -NFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLV-KPGG--------ALLILTMTMNDDRVTPALSADFSLHMMVNTN 312 (352)
T ss_dssp -GGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTE-EEEE--------EEEEEEECCCTTSSSSHHHHHHHHHHHHHST
T ss_pred -ccCCCCccEEEEecccccCCHHHHHHHHHHHHHHc-CCCC--------EEEEEEeccCCCCCCCchHHHhhHHHHhhCC
Confidence 113457999999999987664 489999999999 9988 77765431
Q ss_pred --ccCChhHHHHHHHHcCCeEEEE
Q 008457 503 --RQVDEPSMLSAATQCGFRLVDK 524 (564)
Q Consensus 503 --r~~~~~~~~~~~~~~g~~~~~~ 524 (564)
+..+...+.+.++++||++++.
T Consensus 313 ~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 313 HGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp TCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CCCcCCHHHHHHHHHHCCCceeee
Confidence 1223456778888999999984
No 386
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.05 E-value=3.5e-10 Score=105.35 Aligned_cols=117 Identities=15% Similarity=0.198 Sum_probs=87.5
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCc
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 442 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~ 442 (564)
.+.+++.... .++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++.. ..++.+...|..+.
T Consensus 31 ~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~- 101 (215)
T 2pxx_A 31 SFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL- 101 (215)
T ss_dssp HHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC-
T ss_pred HHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC-
Confidence 3566665543 47789999999999888888777666899999999999999998753 13566666665432
Q ss_pred cchhhhhhcCCCccEEEEeceeeC---------------CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 008457 443 HIEAIKEENNEGFEVILGTDVSYI---------------PEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 443 ~~~~~~~~~~~~fD~Ii~~d~~y~---------------~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
++++++||+|++..++.. ......+++.+.++| +|+| .+++....+
T Consensus 102 ------~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~li~~~~~~ 162 (215)
T 2pxx_A 102 ------DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVL-VPGG--------RFISMTSAA 162 (215)
T ss_dssp ------CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHE-EEEE--------EEEEEESCC
T ss_pred ------CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhC-cCCC--------EEEEEeCCC
Confidence 234578999998876633 235688999999999 9988 777765544
No 387
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.04 E-value=4.4e-09 Score=98.38 Aligned_cols=152 Identities=15% Similarity=0.120 Sum_probs=94.2
Q ss_pred ceechhHH-HHHHHHhcCC---CCCCCCeEEEeCCcccHHHHHHHhc--CCCEEEEEcCChhHHHHHHHHHHhcCCCCCC
Q 008457 355 LMLWESAH-LMAAVLARNP---TIVAGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFL 428 (564)
Q Consensus 355 ~~~W~~~~-~l~~~l~~~~---~~~~~~~vLelG~G~G~l~~~~~~~--~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~ 428 (564)
...|+.-. .++..++... .+.++.+|||||||+|..+..++.. ...+|+++|+++.+++.+.+.....
T Consensus 51 yr~w~~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r------ 124 (232)
T 3id6_C 51 YREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR------ 124 (232)
T ss_dssp EEECCTTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC------
T ss_pred hhhhchHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc------
Confidence 34454322 3566665533 3668999999999999888887764 2459999999999886554443321
Q ss_pred CceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc----
Q 008457 429 AKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ---- 504 (564)
Q Consensus 429 ~~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~---- 504 (564)
.++.+...|-... ... ....++||+|++ |+.. +.....+...+.++| +|+| .++++.+.+.
T Consensus 125 ~nv~~i~~Da~~~---~~~-~~~~~~~D~I~~-d~a~-~~~~~il~~~~~~~L-kpGG--------~lvisik~~~~d~t 189 (232)
T 3id6_C 125 PNIFPLLADARFP---QSY-KSVVENVDVLYV-DIAQ-PDQTDIAIYNAKFFL-KVNG--------DMLLVIKARSIDVT 189 (232)
T ss_dssp TTEEEEECCTTCG---GGT-TTTCCCEEEEEE-CCCC-TTHHHHHHHHHHHHE-EEEE--------EEEEEEC-------
T ss_pred CCeEEEEcccccc---hhh-hccccceEEEEe-cCCC-hhHHHHHHHHHHHhC-CCCe--------EEEEEEccCCcccC
Confidence 2455554443321 111 112358999985 4432 333445566777799 9988 7777644332
Q ss_pred ----CChhHHHHHHHHcCCeEEEEcCC
Q 008457 505 ----VDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 505 ----~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
.........+++.||++.+....
T Consensus 190 ~~~~e~~~~~~~~L~~~gf~~~~~~~l 216 (232)
T 3id6_C 190 KDPKEIYKTEVEKLENSNFETIQIINL 216 (232)
T ss_dssp CCSSSSTTHHHHHHHHTTEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 11134457777889999998744
No 388
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.04 E-value=2.9e-10 Score=114.15 Aligned_cols=104 Identities=19% Similarity=0.116 Sum_probs=79.9
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCC-CEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~-~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.+.+|||||||+|.++..++..+. .+|+++|+++.+++.+++|+..|+.. +++...|... ..+++
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~-----~~~~~~d~~~---------~~~~~ 261 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE-----GEVFASNVFS---------EVKGR 261 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC-----CEEEECSTTT---------TCCSC
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-----CEEEEccccc---------cccCC
Confidence 467999999999988888887764 49999999999999999999988763 2333333221 12568
Q ss_pred ccEEEEeceeeC-----CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 455 FEVILGTDVSYI-----PEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 455 fD~Ii~~d~~y~-----~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
||+|+++.++.. ......+++.+.++| +|+| .+++....
T Consensus 262 fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~L-kpgG--------~l~i~~~~ 305 (343)
T 2pjd_A 262 FDMIISNPPFHDGMQTSLDAAQTLIRGAVRHL-NSGG--------ELRIVANA 305 (343)
T ss_dssp EEEEEECCCCCSSSHHHHHHHHHHHHHHGGGE-EEEE--------EEEEEEET
T ss_pred eeEEEECCCcccCccCCHHHHHHHHHHHHHhC-CCCc--------EEEEEEcC
Confidence 999998877653 345688999999999 9988 77776544
No 389
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.04 E-value=7.7e-10 Score=110.48 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=89.1
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++.. +. ++.+|+++|+|+.+++.+++|+..|++. .++.+...|..+. . .+|
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~---~~v~~~~~D~~~~---------~-~~f 259 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLE---HKIIPILSDVREV---------D-VKG 259 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEESCGGGC---------C-CCE
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEECChHHh---------c-CCC
Confidence 778999999999988887 65 6789999999999999999999999874 3566665554322 1 689
Q ss_pred cEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHc-CCeEEEE
Q 008457 456 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQC-GFRLVDK 524 (564)
Q Consensus 456 D~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-g~~~~~~ 524 (564)
|+|++ |..+. ...+++.+.++| +|+| .++++..... ...+.+.+.+. |+++..+
T Consensus 260 D~Vi~-dpP~~---~~~~l~~~~~~L-~~gG--------~l~~~~~~~~--~~~~~~~l~~~~~~~i~~~ 314 (336)
T 2yx1_A 260 NRVIM-NLPKF---AHKFIDKALDIV-EEGG--------VIHYYTIGKD--FDKAIKLFEKKCDCEVLEK 314 (336)
T ss_dssp EEEEE-CCTTT---GGGGHHHHHHHE-EEEE--------EEEEEEEESS--SHHHHHHHHHHSEEEEEEE
T ss_pred cEEEE-CCcHh---HHHHHHHHHHHc-CCCC--------EEEEEEeecC--chHHHHHHHHhcCCcEEEE
Confidence 99986 44333 348899999999 9977 6666554444 34566667666 6666544
No 390
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.04 E-value=2.6e-09 Score=108.75 Aligned_cols=130 Identities=19% Similarity=0.147 Sum_probs=94.1
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhh--cCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE--NNE 453 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~--~~~ 453 (564)
++.+|||+|||+|.++..++.. +.+|+++|+++.+++.+++|+..|++. .+.+...|.. +.+..+ ...
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~----~~~~~~~d~~-----~~~~~~~~~~~ 278 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG----NVRVLEANAF-----DLLRRLEKEGE 278 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT----TEEEEESCHH-----HHHHHHHHTTC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC----CceEEECCHH-----HHHHHHHhcCC
Confidence 6789999999999888888877 779999999999999999999999873 3555544332 111111 256
Q ss_pred CccEEEEeceeeCC----------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHH----HHHHHcCC
Q 008457 454 GFEVILGTDVSYIP----------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSML----SAATQCGF 519 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~----------~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~~~g~ 519 (564)
+||+|++ |..+.. .....++..+.++| +|+| .++++........+.|. +.+.+.|.
T Consensus 279 ~fD~Ii~-dpP~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 348 (382)
T 1wxx_A 279 RFDLVVL-DPPAFAKGKKDVERAYRAYKEVNLRAIKLL-KEGG--------ILATASCSHHMTEPLFYAMVAEAAQDAHR 348 (382)
T ss_dssp CEEEEEE-CCCCSCCSTTSHHHHHHHHHHHHHHHHHTE-EEEE--------EEEEEECCTTSCHHHHHHHHHHHHHHTTC
T ss_pred CeeEEEE-CCCCCCCChhHHHHHHHHHHHHHHHHHHhc-CCCC--------EEEEEECCCCCCHHHHHHHHHHHHHHcCC
Confidence 8999985 554432 34577888999999 9988 88888777666654443 34456676
Q ss_pred eEEEEc
Q 008457 520 RLVDKW 525 (564)
Q Consensus 520 ~~~~~~ 525 (564)
.+..+.
T Consensus 349 ~~~~i~ 354 (382)
T 1wxx_A 349 LLRVVE 354 (382)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 555443
No 391
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.04 E-value=2e-09 Score=108.62 Aligned_cols=138 Identities=20% Similarity=0.116 Sum_probs=97.1
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecC
Q 008457 362 HLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWG 439 (564)
Q Consensus 362 ~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~ 439 (564)
..++..+.......++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++|+..+++. .+.+...|..
T Consensus 189 ~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~----~i~~~~~D~~ 264 (354)
T 3tma_A 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS----WIRFLRADAR 264 (354)
T ss_dssp HHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT----TCEEEECCGG
T ss_pred HHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC----ceEEEeCChh
Confidence 3456555554445578899999999999888888754 368999999999999999999998863 5666666554
Q ss_pred CCccchhhhhhcCCCccEEEEeceeeCCCC---------hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHH
Q 008457 440 NRDHIEAIKEENNEGFEVILGTDVSYIPEA---------ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSM 510 (564)
Q Consensus 440 ~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~---------~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~ 510 (564)
+. +.+...||+|++ |..|.... +..+++.+.++| +|+| .+++..... .+
T Consensus 265 ~~-------~~~~~~~D~Ii~-npPyg~r~~~~~~~~~~~~~~~~~~~~~L-kpgG--------~l~i~t~~~-----~~ 322 (354)
T 3tma_A 265 HL-------PRFFPEVDRILA-NPPHGLRLGRKEGLFHLYWDFLRGALALL-PPGG--------RVALLTLRP-----AL 322 (354)
T ss_dssp GG-------GGTCCCCSEEEE-CCCSCC----CHHHHHHHHHHHHHHHHTS-CTTC--------EEEEEESCH-----HH
T ss_pred hC-------ccccCCCCEEEE-CCCCcCccCCcccHHHHHHHHHHHHHHhc-CCCc--------EEEEEeCCH-----HH
Confidence 32 123456899885 55565432 378899999999 9988 777664432 23
Q ss_pred HHHHHHcCCeEEEEc
Q 008457 511 LSAATQCGFRLVDKW 525 (564)
Q Consensus 511 ~~~~~~~g~~~~~~~ 525 (564)
++.+.+.|+++.+..
T Consensus 323 ~~~~~~~g~~~~~~~ 337 (354)
T 3tma_A 323 LKRALPPGFALRHAR 337 (354)
T ss_dssp HHHHCCTTEEEEEEE
T ss_pred HHHHhhcCcEEEEEE
Confidence 333222888887765
No 392
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.04 E-value=1.1e-09 Score=107.68 Aligned_cols=143 Identities=10% Similarity=0.039 Sum_probs=94.9
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
++.+|||||||+|.++..++... ..+|+++|+++.+++.+++++..........++.+...|..+ .+.....++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~-----~~~~~~~~~ 169 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLA-----FVRQTPDNT 169 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH-----HHHSSCTTC
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH-----HHHhccCCc
Confidence 56899999999998888887653 569999999999999999987421000112456666554321 111113578
Q ss_pred ccEEEEeceeeCCC--Ch--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccC---ChhHHHHHHHHcCCeEEEEcCC
Q 008457 455 FEVILGTDVSYIPE--AI--LPLFATAKELTASSNKSLREDQQPAFILCHIFRQV---DEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 455 fD~Ii~~d~~y~~~--~~--~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~---~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
||+|++.-...... .+ ..+++.+.++| +|+| ++++....... ....+.+.+++.||..++++..
T Consensus 170 fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~L-kpgG--------~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 170 YDVVIIDTTDPAGPASKLFGEAFYKDVLRIL-KPDG--------ICCNQGESIWLDLELIEKMSRFIRETGFASVQYALM 240 (304)
T ss_dssp EEEEEEECC---------CCHHHHHHHHHHE-EEEE--------EEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred eeEEEECCCCccccchhhhHHHHHHHHHHhc-CCCc--------EEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEe
Confidence 99999743222211 11 68899999999 9988 77776543222 2246778888999998888766
Q ss_pred CCCCC
Q 008457 528 KNSAS 532 (564)
Q Consensus 528 ~~~~~ 532 (564)
..|..
T Consensus 241 ~vP~y 245 (304)
T 3bwc_A 241 HVPTY 245 (304)
T ss_dssp CCTTS
T ss_pred ecccc
Confidence 55544
No 393
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.04 E-value=1.9e-09 Score=109.76 Aligned_cols=111 Identities=17% Similarity=0.037 Sum_probs=84.5
Q ss_pred CCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|+++....+ .+++++++|+........-..++||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 6789999999999999999988 6789999999999999998875443 348999999854311000025689999995
Q ss_pred ccccCCC-------hhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 154 FVLSAVS-------PEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 154 ~vl~~~~-------~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
--....+ ......++.++.++|+|||.+++.+..
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 3221111 145678999999999999999987644
No 394
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.03 E-value=9.3e-10 Score=107.20 Aligned_cols=131 Identities=14% Similarity=0.149 Sum_probs=95.0
Q ss_pred CCCCCCCeEEEeCCcccHHHHHHHhc-C-CCEEEEEcCChhHHHHHHHHHHhc-C-CCCCCCceEEEEeecCCCccchhh
Q 008457 372 PTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTAN-L-KPPFLAKLITKRLEWGNRDHIEAI 447 (564)
Q Consensus 372 ~~~~~~~~vLelG~G~G~l~~~~~~~-~-~~~v~~tD~~~~~l~~~~~n~~~n-~-~~~~~~~i~~~~l~w~~~~~~~~~ 447 (564)
....++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++|+..+ + +. .++.+...|..+.
T Consensus 95 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~---~~v~~~~~d~~~~------ 165 (280)
T 1i9g_A 95 GDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP---DNWRLVVSDLADS------ 165 (280)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC---TTEEEECSCGGGC------
T ss_pred cCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC---CcEEEEECchHhc------
Confidence 34557889999999999888877764 3 569999999999999999999887 4 22 3566665544322
Q ss_pred hhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHH-cCCeEEEEcC
Q 008457 448 KEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQ-CGFRLVDKWP 526 (564)
Q Consensus 448 ~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-~g~~~~~~~~ 526 (564)
.+..++||+|++ +......+++.+.++| +|+| .+++...... ....+.+.+.+ .+|...++++
T Consensus 166 -~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L-~pgG--------~l~~~~~~~~-~~~~~~~~l~~~~~f~~~~~~~ 229 (280)
T 1i9g_A 166 -ELPDGSVDRAVL-----DMLAPWEVLDAVSRLL-VAGG--------VLMVYVATVT-QLSRIVEALRAKQCWTEPRAWE 229 (280)
T ss_dssp -CCCTTCEEEEEE-----ESSCGGGGHHHHHHHE-EEEE--------EEEEEESSHH-HHHHHHHHHHHHSSBCCCEEEC
T ss_pred -CCCCCceeEEEE-----CCcCHHHHHHHHHHhC-CCCC--------EEEEEeCCHH-HHHHHHHHHHhcCCcCCcEEEE
Confidence 123568999986 2345668899999999 9987 7766655432 22356666666 7888777775
Q ss_pred C
Q 008457 527 S 527 (564)
Q Consensus 527 ~ 527 (564)
.
T Consensus 230 ~ 230 (280)
T 1i9g_A 230 T 230 (280)
T ss_dssp C
T ss_pred E
Confidence 5
No 395
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.03 E-value=3.1e-09 Score=107.72 Aligned_cols=126 Identities=13% Similarity=0.175 Sum_probs=88.8
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcCC-CEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~~-~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
..++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.+++|+..+++. +.+.+...|..+. +.+.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~---~~i~~~~~D~~~~-------~~~~ 284 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL---DKIKFIQGDATQL-------SQYV 284 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCG---GGCEEEECCGGGG-------GGTC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCC---CceEEEECChhhC-------Cccc
Confidence 34788999999999988888887654 38999999999999999999998864 4566666555332 2345
Q ss_pred CCccEEEEeceeeCCC-----C----hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEE
Q 008457 453 EGFEVILGTDVSYIPE-----A----ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVD 523 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~-----~----~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~ 523 (564)
++||+|++ |..|... . +..+++.++++| ... .++++. ....+.+.+.+.||++.+
T Consensus 285 ~~fD~Ii~-npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~---------~~~i~~-----~~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 285 DSVDFAIS-NLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKR---------GVFITT-----EKKAIEEAIAENGFEIIH 348 (373)
T ss_dssp SCEEEEEE-ECCCC------CCHHHHHHHHHHHHHHHE-EEE---------EEEEES-----CHHHHHHHHHHTTEEEEE
T ss_pred CCcCEEEE-CCCCCcccCcchhHHHHHHHHHHHHHHHc-CCe---------EEEEEC-----CHHHHHHHHHHcCCEEEE
Confidence 68999987 4455532 1 356777777777 321 333332 223456677788999988
Q ss_pred Ec
Q 008457 524 KW 525 (564)
Q Consensus 524 ~~ 525 (564)
..
T Consensus 349 ~~ 350 (373)
T 3tm4_A 349 HR 350 (373)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 396
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.03 E-value=4.6e-10 Score=109.24 Aligned_cols=121 Identities=22% Similarity=0.254 Sum_probs=86.0
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeec
Q 008457 359 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEW 438 (564)
Q Consensus 359 ~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w 438 (564)
+.+..+.+++.......++.+|||+|||+|.++..++.....+|+++|+|+.+++.+++|+..+++. +++.+...||
T Consensus 106 ~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~---~~v~~~~~D~ 182 (284)
T 1nv8_A 106 PETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVS---DRFFVRKGEF 182 (284)
T ss_dssp TTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCT---TSEEEEESST
T ss_pred hhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CceEEEECcc
Confidence 3444555555543222256799999999998888777664569999999999999999999998864 4688888887
Q ss_pred CCCccchhhhhhcCCCc---cEEEEeceeeCC--------------------CChHHHHHHHH-HHhhccCCCCCCCCCc
Q 008457 439 GNRDHIEAIKEENNEGF---EVILGTDVSYIP--------------------EAILPLFATAK-ELTASSNKSLREDQQP 494 (564)
Q Consensus 439 ~~~~~~~~~~~~~~~~f---D~Ii~~d~~y~~--------------------~~~~~l~~~~~-~ll~~~~g~~~~~~~~ 494 (564)
.+. + . ++| |+|+++. .|.. .+-..+++.+. +.| +|+|
T Consensus 183 ~~~--~------~-~~f~~~D~IvsnP-Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l-~pgG-------- 243 (284)
T 1nv8_A 183 LEP--F------K-EKFASIEMILSNP-PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYD-TSGK-------- 243 (284)
T ss_dssp TGG--G------G-GGTTTCCEEEECC-CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCC-CTTC--------
T ss_pred hhh--c------c-cccCCCCEEEEcC-CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcC-CCCC--------
Confidence 642 1 1 367 9999762 2321 11126788888 999 8988
Q ss_pred EEEEEEe
Q 008457 495 AFILCHI 501 (564)
Q Consensus 495 ~~~~~~~ 501 (564)
.+++...
T Consensus 244 ~l~~e~~ 250 (284)
T 1nv8_A 244 IVLMEIG 250 (284)
T ss_dssp EEEEECC
T ss_pred EEEEEEC
Confidence 7776543
No 397
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.03 E-value=8.4e-10 Score=103.19 Aligned_cols=131 Identities=16% Similarity=0.143 Sum_probs=87.9
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
.++.+|||+|||+|.++..++... ..+|+++|+++.+++.+.+++..+.......++.+...|..+. ++..+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l-------~~~~~ 98 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL-------PPLSG 98 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC-------CSCCC
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC-------CCCCC
Confidence 367899999999998888888765 5699999999998886554443322111124677776665542 12233
Q ss_pred CccEEEEeceee--------CCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc-------------CCh----h
Q 008457 454 GFEVILGTDVSY--------IPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------VDE----P 508 (564)
Q Consensus 454 ~fD~Ii~~d~~y--------~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~-------------~~~----~ 508 (564)
. |.|. +++ +..+...+++.+.++| +|+| .++++..... ... +
T Consensus 99 ~-d~v~---~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (218)
T 3mq2_A 99 V-GELH---VLMPWGSLLRGVLGSSPEMLRGMAAVC-RPGA--------SFLVALNLHAWRPSVPEVGEHPEPTPDSADE 165 (218)
T ss_dssp E-EEEE---EESCCHHHHHHHHTSSSHHHHHHHHTE-EEEE--------EEEEEEEGGGBTTBCGGGTTCCCCCHHHHHH
T ss_pred C-CEEE---EEccchhhhhhhhccHHHHHHHHHHHc-CCCc--------EEEEEeccccccccccccccCCccchHHHHH
Confidence 4 6665 222 2334488999999999 9988 7877653311 111 2
Q ss_pred HHHHHHHHcCCeEEEEc
Q 008457 509 SMLSAATQCGFRLVDKW 525 (564)
Q Consensus 509 ~~~~~~~~~g~~~~~~~ 525 (564)
.+...+.++||++.++.
T Consensus 166 ~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 166 WLAPRYAEAGWKLADCR 182 (218)
T ss_dssp HHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHcCCCceeee
Confidence 35667888999999875
No 398
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.03 E-value=6.7e-10 Score=111.54 Aligned_cols=111 Identities=16% Similarity=0.282 Sum_probs=87.3
Q ss_pred cCCCCCeEEEEcCCccccHHHHHHhCCC-----cEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCc
Q 008457 72 SGAGRKDVLEVGCGAGNTIFPLIAAYPD-----VFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSS 146 (564)
Q Consensus 72 ~~~~~~~VLDiGcG~G~~~~~l~~~~~~-----~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 146 (564)
...++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.+....+.++.+.++|.... .+.++
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-----~~~~~ 201 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-----LLVDP 201 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-----CCCCC
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-----cccCC
Confidence 3456789999999999999998877533 7899999999999999987654444678889987542 24578
Q ss_pred eeEEEEcccccCCChhHH----------------HHHHHHHHhccCCCeEEEEEecC
Q 008457 147 IDIVTMVFVLSAVSPEKM----------------SLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 147 fD~V~~~~vl~~~~~~~~----------------~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
||+|+++-.+++++.++. ..+++++.+.|+|||++++..+.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 999999987766543321 26899999999999999887543
No 399
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.03 E-value=7.6e-10 Score=103.23 Aligned_cols=111 Identities=19% Similarity=0.206 Sum_probs=83.7
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||+|||+|.++..+ +.+|+++|+++. .+.+...|..+. ++++++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~-------------------~~~~~~~d~~~~-------~~~~~~ 115 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI----RNPVHCFDLASL-------------------DPRVTVCDMAQV-------PLEDES 115 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC----CSCEEEEESSCS-------------------STTEEESCTTSC-------SCCTTC
T ss_pred CCCCeEEEECCcCCHHHHHh----hccEEEEeCCCC-------------------CceEEEeccccC-------CCCCCC
Confidence 36789999999999665544 368999999987 122333333321 234568
Q ss_pred ccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc-CChhHHHHHHHHcCCeEEEEc
Q 008457 455 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-VDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~g~~~~~~~ 525 (564)
||+|+++.+++ ......+++.+.++| +|+| .++++..... .+...+.+.+.+.||+++++.
T Consensus 116 fD~v~~~~~l~-~~~~~~~l~~~~~~L-~~gG--------~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 116 VDVAVFCLSLM-GTNIRDFLEEANRVL-KPGG--------LLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp EEEEEEESCCC-SSCHHHHHHHHHHHE-EEEE--------EEEEEECGGGCSCHHHHHHHHHHTTEEEEEEE
T ss_pred EeEEEEehhcc-ccCHHHHHHHHHHhC-CCCe--------EEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEe
Confidence 99999999986 588999999999999 9988 7777655544 355678899999999998865
No 400
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.02 E-value=4.7e-09 Score=105.66 Aligned_cols=140 Identities=8% Similarity=-0.039 Sum_probs=105.2
Q ss_pred HHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCC-CEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccc
Q 008457 366 AVLARNPTIVAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 444 (564)
Q Consensus 366 ~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~-~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~ 444 (564)
.-+....+.....+|||+|||+|.++..++.+.+ .+++..|+ |.+++.+++++.... .+++++...|..++
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~----~~rv~~~~gD~~~~--- 240 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE----EEQIDFQEGDFFKD--- 240 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTTS---
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc----cCceeeecCccccC---
Confidence 3344444555778999999999988888887764 48999999 899999998876433 26788888876543
Q ss_pred hhhhhhcCCCccEEEEeceeeCCCCh--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEee--------------------
Q 008457 445 EAIKEENNEGFEVILGTDVSYIPEAI--LPLFATAKELTASSNKSLREDQQPAFILCHIF-------------------- 502 (564)
Q Consensus 445 ~~~~~~~~~~fD~Ii~~d~~y~~~~~--~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~-------------------- 502 (564)
+...+|+|+...++++..+- ..+++.+.+.| +|+| ++++....
T Consensus 241 ------~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al-~pgg--------~lli~e~~~~~~~~~~~~~~~~dl~ml~ 305 (353)
T 4a6d_A 241 ------PLPEADLYILARVLHDWADGKCSHLLERIYHTC-KPGG--------GILVIESLLDEDRRGPLLTQLYSLNMLV 305 (353)
T ss_dssp ------CCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHC-CTTC--------EEEEEECCCCTTSCCCHHHHHHHHHHHH
T ss_pred ------CCCCceEEEeeeecccCCHHHHHHHHHHHHhhC-CCCC--------EEEEEEeeeCCCCCCCHHHHHHHHHHHH
Confidence 23468999999999987654 67899999999 9988 77766542
Q ss_pred ----ccCChhHHHHHHHHcCCeEEEEcCCC
Q 008457 503 ----RQVDEPSMLSAATQCGFRLVDKWPSK 528 (564)
Q Consensus 503 ----r~~~~~~~~~~~~~~g~~~~~~~~~~ 528 (564)
+..+..++.+.++++||+.++++..+
T Consensus 306 ~~~g~ert~~e~~~ll~~AGf~~v~v~~~~ 335 (353)
T 4a6d_A 306 QTEGQERTPTHYHMLLSSAGFRDFQFKKTG 335 (353)
T ss_dssp SSSCCCCCHHHHHHHHHHHTCEEEEEECCS
T ss_pred hCCCcCCCHHHHHHHHHHCCCceEEEEEcC
Confidence 11233467788899999999998653
No 401
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.02 E-value=7e-09 Score=99.39 Aligned_cols=141 Identities=11% Similarity=0.122 Sum_probs=84.3
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc---
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN--- 451 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~--- 451 (564)
++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++|+..+++. +++.+...|..+. ..+ .+.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-~~~---~~~~~~ 137 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLS---DLIKVVKVPQKTL-LMD---ALKEES 137 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEECCTTCS-STT---TSTTCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCC---ccEEEEEcchhhh-hhh---hhhccc
Confidence 57799999999998887777653 579999999999999999999998764 4577776664321 000 122
Q ss_pred CCCccEEEEeceeeCCC---------------ChHHHHHHHHHHhhccCCCCC------------CCCCcEEEEEEeecc
Q 008457 452 NEGFEVILGTDVSYIPE---------------AILPLFATAKELTASSNKSLR------------EDQQPAFILCHIFRQ 504 (564)
Q Consensus 452 ~~~fD~Ii~~d~~y~~~---------------~~~~l~~~~~~ll~~~~g~~~------------~~~~~~~~~~~~~r~ 504 (564)
+++||+|+++.+.+... ....++..+.++| +|+|.-. ......++ ......
T Consensus 138 ~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L-kpgG~l~~~~~~~~~~~~~l~~~g~~~-~~~~~~ 215 (254)
T 2h00_A 138 EIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIM-AEGGELEFVKRIIHDSLQLKKRLRWYS-CMLGKK 215 (254)
T ss_dssp SCCBSEEEECCCCC-------------------------CTTTTH-HHHTHHHHHHHHHHHHHHHGGGBSCEE-EEESST
T ss_pred CCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHE-ecCCEEEEEHHHHHHHHhcccceEEEE-ECCCCh
Confidence 25899999765544321 0113444444444 4444100 00011222 222233
Q ss_pred CChhHHHHHHHHcCCeEEEEc
Q 008457 505 VDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 505 ~~~~~~~~~~~~~g~~~~~~~ 525 (564)
.....+.+.+++.||...++.
T Consensus 216 ~~~~~~~~~l~~~Gf~~v~~~ 236 (254)
T 2h00_A 216 CSLAPLKEELRIQGVPKVTYT 236 (254)
T ss_dssp TSHHHHHHHHHHTTCSEEEEE
T ss_pred hHHHHHHHHHHHcCCCceEEE
Confidence 333467788889999877664
No 402
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.01 E-value=8.5e-10 Score=103.55 Aligned_cols=111 Identities=17% Similarity=0.168 Sum_probs=80.3
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.++.+|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++.. +++.+...|..+ ....+.....
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~--~~~~~~~~~~ 131 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN---DRVEVRTGLALD--SLQQIENEKY 131 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEESCHHH--HHHHHHHTTC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEEcCHHH--HHHHHHhcCC
Confidence 367899999999998777777653 469999999999999999999988764 457776555421 1111111112
Q ss_pred CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 453 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
++||+|+..-. ......+++.+.++| +|+| .+++....
T Consensus 132 ~~fD~v~~d~~---~~~~~~~l~~~~~~L-~pgG--------~lv~~~~~ 169 (223)
T 3duw_A 132 EPFDFIFIDAD---KQNNPAYFEWALKLS-RPGT--------VIIGDNVV 169 (223)
T ss_dssp CCCSEEEECSC---GGGHHHHHHHHHHTC-CTTC--------EEEEESCS
T ss_pred CCcCEEEEcCC---cHHHHHHHHHHHHhc-CCCc--------EEEEeCCC
Confidence 57999985322 456788999999999 9988 66665443
No 403
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.01 E-value=1.1e-09 Score=102.63 Aligned_cols=124 Identities=12% Similarity=0.066 Sum_probs=84.2
Q ss_pred CCCeEEEeCCcccHHHHHHHhc--CCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc--
Q 008457 376 AGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN-- 451 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~--~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~-- 451 (564)
++.+|||||||+|..+..++.. ...+|+++|+++.+++.+++|+..+++. +++.+...|..+ .+..+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~-----~l~~~~~~ 129 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ---DKVTILNGASQD-----LIPQLKKK 129 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG---GGEEEEESCHHH-----HGGGTTTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC---CceEEEECCHHH-----HHHHHHHh
Confidence 6789999999999777777764 2569999999999999999999998874 457776555421 111122
Q ss_pred --CCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcC
Q 008457 452 --NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCG 518 (564)
Q Consensus 452 --~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g 518 (564)
.++||+|+......+......++..+ ++| +|+| ++++..... .....+.+.+.+..
T Consensus 130 ~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~L-kpgG--------~lv~~~~~~-~~~~~~~~~l~~~~ 187 (221)
T 3u81_A 130 YDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLL-RKGT--------VLLADNVIV-PGTPDFLAYVRGSS 187 (221)
T ss_dssp SCCCCCSEEEECSCGGGHHHHHHHHHHT-TCC-CTTC--------EEEESCCCC-CCCHHHHHHHHHCT
T ss_pred cCCCceEEEEEcCCcccchHHHHHHHhc-ccc-CCCe--------EEEEeCCCC-cchHHHHHHHhhCC
Confidence 26899998643333222233455555 899 9988 666654443 33456777776653
No 404
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.00 E-value=9.4e-10 Score=113.22 Aligned_cols=140 Identities=11% Similarity=0.121 Sum_probs=100.5
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCc
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSS 146 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~ 146 (564)
..+...++.+|||+|||+|..+..++...+ ..+|+++|+++.+++.++++....+ .++.+.+.|..... ...+++
T Consensus 99 ~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~---~~~~~~ 175 (456)
T 3m4x_A 99 TAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELV---PHFSGF 175 (456)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHH---HHHTTC
T ss_pred HHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhh---hhcccc
Confidence 445567899999999999999999998743 4799999999999999998875444 46888888875432 112478
Q ss_pred eeEEEEcc------cccCCC-------h-------hHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccc
Q 008457 147 IDIVTMVF------VLSAVS-------P-------EKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISEN 206 (564)
Q Consensus 147 fD~V~~~~------vl~~~~-------~-------~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~ 206 (564)
||+|++.. ++.+-+ . .....+|.++.++|||||.|++++-.....
T Consensus 176 FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~e--------------- 240 (456)
T 3m4x_A 176 FDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPE--------------- 240 (456)
T ss_dssp EEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGG---------------
T ss_pred CCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccc---------------
Confidence 99999843 222211 0 123478999999999999999876443221
Q ss_pred eeecCCCceeeccCHHHHHHHHHhCCCcEEEe
Q 008457 207 FYVRGDGTRAFYFSNDFLTSLFKENGFDVEEL 238 (564)
Q Consensus 207 ~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 238 (564)
-+.+.+..++++.||+++.+
T Consensus 241 ------------Ene~vv~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 241 ------------ENEEIISWLVENYPVTIEEI 260 (456)
T ss_dssp ------------GTHHHHHHHHHHSSEEEECC
T ss_pred ------------cCHHHHHHHHHhCCCEEEec
Confidence 14566777777877776654
No 405
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.00 E-value=1.5e-09 Score=111.16 Aligned_cols=134 Identities=19% Similarity=0.197 Sum_probs=95.6
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++..++..++.+|+++|+++.+++.+++|+..|++. .++.+...|..+. ...+ .....+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~---~~v~~~~~d~~~~--~~~~-~~~~~~f 290 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVE---DRMKFIVGSAFEE--MEKL-QKKGEKF 290 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCG---GGEEEEESCHHHH--HHHH-HHTTCCE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC---ccceEEECCHHHH--HHHH-HhhCCCC
Confidence 77899999999998888888776779999999999999999999999873 2566665543211 1110 0125689
Q ss_pred cEEEEeceeeCC----------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHH----HHHHHcCCeE
Q 008457 456 EVILGTDVSYIP----------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSML----SAATQCGFRL 521 (564)
Q Consensus 456 D~Ii~~d~~y~~----------~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~~~g~~~ 521 (564)
|+|++ |..+.. .....++..+.++| +|+| .++++........+.|. +.+.+.|..+
T Consensus 291 D~Vi~-dpP~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 360 (396)
T 2as0_A 291 DIVVL-DPPAFVQHEKDLKAGLRAYFNVNFAGLNLV-KDGG--------ILVTCSCSQHVDLQMFKDMIIAAGAKAGKFL 360 (396)
T ss_dssp EEEEE-CCCCSCSSGGGHHHHHHHHHHHHHHHHTTE-EEEE--------EEEEEECCTTSCHHHHHHHHHHHHHHTTEEE
T ss_pred CEEEE-CCCCCCCCHHHHHHHHHHHHHHHHHHHHhc-CCCc--------EEEEEECCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 99986 444432 44677888899999 9988 78777776666654443 3444567666
Q ss_pred EEEc
Q 008457 522 VDKW 525 (564)
Q Consensus 522 ~~~~ 525 (564)
.-+.
T Consensus 361 ~~i~ 364 (396)
T 2as0_A 361 KMLE 364 (396)
T ss_dssp EESS
T ss_pred EEEe
Confidence 5444
No 406
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.00 E-value=2.7e-09 Score=111.04 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=87.5
Q ss_pred hccCC--CCCeEEEEcCCccccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCC
Q 008457 70 YFSGA--GRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPS 145 (564)
Q Consensus 70 ~l~~~--~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~ 145 (564)
.+... ++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.++++....+ .++.+++.|+..... ...+
T Consensus 110 ~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~---~~~~ 186 (479)
T 2frx_A 110 ALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA---AVPE 186 (479)
T ss_dssp HHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH---HSTT
T ss_pred HhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh---hccc
Confidence 44445 889999999999999999998853 5799999999999999998875444 478888888864321 1346
Q ss_pred ceeEEEEc------ccccC-------CChh-------HHHHHHHHHHhccCCCeEEEEEecCC
Q 008457 146 SIDIVTMV------FVLSA-------VSPE-------KMSLVLQNIKKVLKPTGYVLFRDYAI 188 (564)
Q Consensus 146 ~fD~V~~~------~vl~~-------~~~~-------~~~~~l~~~~r~LkpgG~lii~~~~~ 188 (564)
+||+|++. .++.+ ++++ ....+|.++.++|||||+|++++-..
T Consensus 187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 89999982 12222 2211 24578999999999999999976543
No 407
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.00 E-value=1.9e-09 Score=104.31 Aligned_cols=118 Identities=14% Similarity=0.090 Sum_probs=84.8
Q ss_pred CCCCCeEEEEcCCc------cccHHHHHHhCC-CcEEEEEeCChHHHHHHHhcccccCCCeeE-EEecCCcccccCCCCC
Q 008457 73 GAGRKDVLEVGCGA------GNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTETRVST-FVCDLISDDLSRQISP 144 (564)
Q Consensus 73 ~~~~~~VLDiGcG~------G~~~~~l~~~~~-~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~-~~~d~~~~~~~~~~~~ 144 (564)
..++.+|||+|||+ |. ..+++..+ +.+|+|+|+|+. . .++++ +++|+.... + .
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v----~~v~~~i~gD~~~~~----~-~ 121 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V----SDADSTLIGDCATVH----T-A 121 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B----CSSSEEEESCGGGCC----C-S
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C----CCCEEEEECccccCC----c-c
Confidence 36789999999955 55 44555554 689999999997 1 25788 999986532 2 3
Q ss_pred CceeEEEEcccccC--------C-ChhHHHHHHHHHHhccCCCeEEEEEecCCCchhhhhhcccccccccceeecCCCce
Q 008457 145 SSIDIVTMVFVLSA--------V-SPEKMSLVLQNIKKVLKPTGYVLFRDYAIGDLAQERLTGKDQKISENFYVRGDGTR 215 (564)
Q Consensus 145 ~~fD~V~~~~vl~~--------~-~~~~~~~~l~~~~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (564)
++||+|+++...++ . .......+++++.++|||||.|++..+...
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~-------------------------- 175 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS-------------------------- 175 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS--------------------------
T ss_pred CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC--------------------------
Confidence 68999999754221 1 123456899999999999999999754321
Q ss_pred eeccCHHHHHHHHHhCCCcEEEee
Q 008457 216 AFYFSNDFLTSLFKENGFDVEELG 239 (564)
Q Consensus 216 ~~~~~~~~l~~~l~~aGf~~~~~~ 239 (564)
..+++.+++++.||..+...
T Consensus 176 ----~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 176 ----WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp ----CCHHHHHHHTTEEEEEEEEE
T ss_pred ----CHHHHHHHHHHcCCcEEEEE
Confidence 23477788999999766554
No 408
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.99 E-value=6.9e-09 Score=97.57 Aligned_cols=142 Identities=18% Similarity=0.197 Sum_probs=93.3
Q ss_pred HHHHH---hcCCCCCCCCeEEEeCCcccHHHHHHHhc-C-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeec
Q 008457 364 MAAVL---ARNPTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEW 438 (564)
Q Consensus 364 l~~~l---~~~~~~~~~~~vLelG~G~G~l~~~~~~~-~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w 438 (564)
++..+ .....+.++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++|+..+ .++.+...|.
T Consensus 58 ~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~------~~v~~~~~d~ 131 (227)
T 1g8a_A 58 LGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER------RNIVPILGDA 131 (227)
T ss_dssp HHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC------TTEEEEECCT
T ss_pred HHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc------CCCEEEEccC
Confidence 34455 33334557889999999999888888765 3 369999999999999999998764 3466666655
Q ss_pred CCCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCC----hh----HH
Q 008457 439 GNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD----EP----SM 510 (564)
Q Consensus 439 ~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~----~~----~~ 510 (564)
.+... +.. ..++||+|++ |.. .......+++.+.++| +|+| .++++...+... .. .-
T Consensus 132 ~~~~~---~~~-~~~~~D~v~~-~~~-~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~~~~~~~~~~~~~~~~ 196 (227)
T 1g8a_A 132 TKPEE---YRA-LVPKVDVIFE-DVA-QPTQAKILIDNAEVYL-KRGG--------YGMIAVKSRSIDVTKEPEQVFREV 196 (227)
T ss_dssp TCGGG---GTT-TCCCEEEEEE-CCC-STTHHHHHHHHHHHHE-EEEE--------EEEEEEEGGGTCTTSCHHHHHHHH
T ss_pred CCcch---hhc-ccCCceEEEE-CCC-CHhHHHHHHHHHHHhc-CCCC--------EEEEEEecCCCCCCCChhhhhHHH
Confidence 43211 111 1358999995 443 3333345599999999 9988 777775443221 11 12
Q ss_pred HHHHHHcCCeEEEEcCC
Q 008457 511 LSAATQCGFRLVDKWPS 527 (564)
Q Consensus 511 ~~~~~~~g~~~~~~~~~ 527 (564)
+..+.+. |++.+....
T Consensus 197 l~~l~~~-f~~~~~~~~ 212 (227)
T 1g8a_A 197 ERELSEY-FEVIERLNL 212 (227)
T ss_dssp HHHHHTT-SEEEEEEEC
T ss_pred HHHHHhh-ceeeeEecc
Confidence 3334555 988887644
No 409
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.99 E-value=3.9e-10 Score=108.16 Aligned_cols=95 Identities=13% Similarity=0.054 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccc-----cCCCeeEEEecCCcccccCCCCCCcee
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSID 148 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~fD 148 (564)
..+.+|||||||+|..+..+++. + .+|+++|+++.+++.|+++... ...+++++.+|.... . ++||
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~------~-~~fD 141 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD------I-KKYD 141 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC------C-CCEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH------H-hhCC
Confidence 45689999999999999999887 6 8999999999999999987643 135788888887532 2 7899
Q ss_pred EEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEE
Q 008457 149 IVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 149 ~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
+|++.. + ++..+++.+++.|+|||++++.
T Consensus 142 ~Ii~d~-----~--dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 142 LIFCLQ-----E--PDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp EEEESS-----C--CCHHHHHHHHTTEEEEEEEEEE
T ss_pred EEEECC-----C--ChHHHHHHHHHhcCCCcEEEEE
Confidence 999962 1 2335999999999999999985
No 410
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.99 E-value=2.2e-09 Score=106.15 Aligned_cols=141 Identities=17% Similarity=0.063 Sum_probs=93.8
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEee
Q 008457 360 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 437 (564)
Q Consensus 360 ~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~ 437 (564)
++.+++..+. ..++.+|||+|||+|+.+..++... ..+|+++|+++.+++.+++|+..++.. ++.+...|
T Consensus 106 ~s~l~~~~l~----~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~----~v~~~~~D 177 (315)
T 1ixk_A 106 SSMYPPVALD----PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL----NVILFHSS 177 (315)
T ss_dssp HHHHHHHHHC----CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC----SEEEESSC
T ss_pred HHHHHHHHhC----CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC----eEEEEECC
Confidence 3444555542 3477899999999998888887753 469999999999999999999988763 46655444
Q ss_pred cCCCccchhhhhhcCCCccEEEEece------eeCCC----------------ChHHHHHHHHHHhhccCCCCCCCCCcE
Q 008457 438 WGNRDHIEAIKEENNEGFEVILGTDV------SYIPE----------------AILPLFATAKELTASSNKSLREDQQPA 495 (564)
Q Consensus 438 w~~~~~~~~~~~~~~~~fD~Ii~~d~------~y~~~----------------~~~~l~~~~~~ll~~~~g~~~~~~~~~ 495 (564)
..+. .. ..++||+|++.-. +.... ....+++.+.++| +|+| .
T Consensus 178 ~~~~------~~-~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~L-kpGG--------~ 241 (315)
T 1ixk_A 178 SLHI------GE-LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVL-KPGG--------I 241 (315)
T ss_dssp GGGG------GG-GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHE-EEEE--------E
T ss_pred hhhc------cc-ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhC-CCCC--------E
Confidence 3221 11 2468999986322 11111 0158899999999 9988 6
Q ss_pred EEEEEee--ccCChhHHHHHHHHcCCeEEEE
Q 008457 496 FILCHIF--RQVDEPSMLSAATQCGFRLVDK 524 (564)
Q Consensus 496 ~~~~~~~--r~~~~~~~~~~~~~~g~~~~~~ 524 (564)
++++... ..+.+......+++.||+++.+
T Consensus 242 lv~stcs~~~~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 242 LVYSTCSLEPEENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp EEEEESCCCGGGTHHHHHHHHHHSSEEEECC
T ss_pred EEEEeCCCChHHhHHHHHHHHhcCCCEEecC
Confidence 6665432 2333333445566788877654
No 411
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.99 E-value=1.2e-09 Score=106.62 Aligned_cols=141 Identities=14% Similarity=0.101 Sum_probs=88.8
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCC-CCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKP-PFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~-~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
+.++|||||||+|+++..++... ..+|+++|+|+.+++.+++|+...+.. ....++++..-|..+. + ....+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~-----l-~~~~~ 156 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF-----V-NQTSQ 156 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---------CCCC
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH-----H-hhcCC
Confidence 46799999999998888887763 579999999999999999998754211 1124566665554322 1 11356
Q ss_pred CccEEEE--eceeeCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCC---hhHHHHHHHHcCCeEEEEcC
Q 008457 454 GFEVILG--TDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD---EPSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 454 ~fD~Ii~--~d~~y~~~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~---~~~~~~~~~~~g~~~~~~~~ 526 (564)
+||+|++ .|....... ...+++.+.++| +|+| ++++........ ...+...+++. |.....+.
T Consensus 157 ~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~L-kpgG--------~lv~~~~s~~~~~~~~~~~~~~l~~~-F~~v~~~~ 226 (294)
T 3adn_A 157 TFDVIISDCTDPIGPGESLFTSAFYEGCKRCL-NPGG--------IFVAQNGVCFLQQEEAIDSHRKLSHY-FSDVGFYQ 226 (294)
T ss_dssp CEEEEEECC----------CCHHHHHHHHHTE-EEEE--------EEEEEEEECSSCCHHHHHHHHHHHHH-CSEEEEEE
T ss_pred CccEEEECCCCccCcchhccHHHHHHHHHHhc-CCCC--------EEEEecCCcccchHHHHHHHHHHHHH-CCCeEEEE
Confidence 8999997 222211111 277999999999 9988 777655433222 23556666665 55555544
Q ss_pred CCCCCC
Q 008457 527 SKNSAS 532 (564)
Q Consensus 527 ~~~~~~ 532 (564)
...|..
T Consensus 227 ~~vp~~ 232 (294)
T 3adn_A 227 AAIPTY 232 (294)
T ss_dssp EECTTS
T ss_pred EEeccc
Confidence 434443
No 412
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.99 E-value=1.9e-09 Score=104.31 Aligned_cols=105 Identities=15% Similarity=0.102 Sum_probs=80.2
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
+.++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++|+..|++. ++.+...|..+. +. .
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~----~~~~~~~d~~~~-------~~-~ 184 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN----NVIPILADNRDV-------EL-K 184 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS----SEEEEESCGGGC-------CC-T
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----CEEEEECChHHc-------Cc-c
Confidence 3478899999999998888888764 569999999999999999999999873 455554443321 11 4
Q ss_pred CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 008457 453 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
++||+|++..+ + ....++..+.++| +|+| .++++....
T Consensus 185 ~~~D~Vi~d~p-~---~~~~~l~~~~~~L-kpgG--------~l~~s~~~~ 222 (272)
T 3a27_A 185 DVADRVIMGYV-H---KTHKFLDKTFEFL-KDRG--------VIHYHETVA 222 (272)
T ss_dssp TCEEEEEECCC-S---SGGGGHHHHHHHE-EEEE--------EEEEEEEEE
T ss_pred CCceEEEECCc-c---cHHHHHHHHHHHc-CCCC--------EEEEEEcCc
Confidence 58999986543 2 6778899999999 9987 676665544
No 413
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.99 E-value=7.8e-10 Score=105.84 Aligned_cols=126 Identities=12% Similarity=0.061 Sum_probs=80.6
Q ss_pred HHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhc--C-CCEEEEEcCChhHHHHHHHHHHhc---CCCCC----------
Q 008457 364 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAG--S-ADLVVATDGDSIALDLLAQNVTAN---LKPPF---------- 427 (564)
Q Consensus 364 l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~--~-~~~v~~tD~~~~~l~~~~~n~~~n---~~~~~---------- 427 (564)
+...+.......++.+|||+|||+|.++..++.. . ..+|+++|+|+.+++.+++|+..+ ++...
T Consensus 39 l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (250)
T 1o9g_A 39 IFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSER 118 (250)
T ss_dssp HHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhh
Confidence 3344443322235679999999999888777765 2 468999999999999999998876 32100
Q ss_pred ------------CCceE-------------EEEeecCCCccchhhhhh-cCCCccEEEEeceeeCCC---------ChHH
Q 008457 428 ------------LAKLI-------------TKRLEWGNRDHIEAIKEE-NNEGFEVILGTDVSYIPE---------AILP 472 (564)
Q Consensus 428 ------------~~~i~-------------~~~l~w~~~~~~~~~~~~-~~~~fD~Ii~~d~~y~~~---------~~~~ 472 (564)
..++. +...|+.+... .... ...+||+|+++.+..... ....
T Consensus 119 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~ 195 (250)
T 1o9g_A 119 FGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRA---LSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAG 195 (250)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGG---HHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHH
T ss_pred cccccchhhhhhhhhhhhhccccccccccceeecccccccc---cccccCCCCceEEEeCCCeeccccccccccccHHHH
Confidence 00033 55555443200 0000 234899999775433322 2458
Q ss_pred HHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 008457 473 LFATAKELTASSNKSLREDQQPAFILCHI 501 (564)
Q Consensus 473 l~~~~~~ll~~~~g~~~~~~~~~~~~~~~ 501 (564)
+++.+.++| +|+| .++++..
T Consensus 196 ~l~~~~~~L-kpgG--------~l~~~~~ 215 (250)
T 1o9g_A 196 LLRSLASAL-PAHA--------VIAVTDR 215 (250)
T ss_dssp HHHHHHHHS-CTTC--------EEEEEES
T ss_pred HHHHHHHhc-CCCc--------EEEEeCc
Confidence 999999999 9988 7777433
No 414
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.99 E-value=1e-09 Score=105.61 Aligned_cols=111 Identities=15% Similarity=0.104 Sum_probs=80.7
Q ss_pred HHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCcc
Q 008457 364 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 443 (564)
Q Consensus 364 l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~ 443 (564)
+.+++..... ++.+|||+|||+|.++..++.. +.+|+++|+++.+++.++++... . +...|..+.
T Consensus 44 ~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~--------~--~~~~d~~~~-- 108 (260)
T 2avn_A 44 IGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGVK--------N--VVEAKAEDL-- 108 (260)
T ss_dssp HHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTCS--------C--EEECCTTSC--
T ss_pred HHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcCC--------C--EEECcHHHC--
Confidence 3444444322 6789999999999777777665 46899999999999999987531 1 233333221
Q ss_pred chhhhhhcCCCccEEEEeceeeC-CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 008457 444 IEAIKEENNEGFEVILGTDVSYI-PEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 444 ~~~~~~~~~~~fD~Ii~~d~~y~-~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
++++++||+|++..++++ ..+...+++.+.++| +|+| .++++...+
T Consensus 109 -----~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l~~~~~~~ 155 (260)
T 2avn_A 109 -----PFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVL-VPDG--------LLIATVDNF 155 (260)
T ss_dssp -----CSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHE-EEEE--------EEEEEEEBH
T ss_pred -----CCCCCCEEEEEEcchhhhccccHHHHHHHHHHHc-CCCe--------EEEEEeCCh
Confidence 234578999999876654 366999999999999 9988 777766543
No 415
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.99 E-value=3.1e-09 Score=99.41 Aligned_cols=100 Identities=12% Similarity=0.142 Sum_probs=74.1
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
++.+|||||||+|..+..++... ..+|+++|+++++++.+++|+..++... +++.+..-|. .+.+..+..+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~--~~i~~~~gda-----~~~l~~~~~~ 128 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSP--SRVRFLLSRP-----LDVMSRLAND 128 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCG--GGEEEECSCH-----HHHGGGSCTT
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCc--CcEEEEEcCH-----HHHHHHhcCC
Confidence 34599999999997777666642 5799999999999999999999887631 3566654322 2222233357
Q ss_pred CccEEEEeceeeCCCChHHHHHHHHHHhhccCC
Q 008457 454 GFEVILGTDVSYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
+||+|+.. . .......+++.+.++| +|+|
T Consensus 129 ~fD~V~~d-~--~~~~~~~~l~~~~~~L-kpGG 157 (221)
T 3dr5_A 129 SYQLVFGQ-V--SPMDLKALVDAAWPLL-RRGG 157 (221)
T ss_dssp CEEEEEEC-C--CTTTHHHHHHHHHHHE-EEEE
T ss_pred CcCeEEEc-C--cHHHHHHHHHHHHHHc-CCCc
Confidence 99999853 2 3566788999999999 9988
No 416
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.99 E-value=9.5e-10 Score=112.63 Aligned_cols=113 Identities=18% Similarity=0.064 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCC--CeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTET--RVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~--~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++....+. +++++++|+........-..++||+|+
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 37889999999999999999987 235899999999999999988764442 789999998543110001256899999
Q ss_pred EcccccCCCh-------hHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 152 MVFVLSAVSP-------EKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 152 ~~~vl~~~~~-------~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
+.--....+. .....++.++.++|+|||.+++.+..
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9543222211 45778999999999999999887644
No 417
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.98 E-value=1.1e-09 Score=99.92 Aligned_cols=141 Identities=13% Similarity=0.119 Sum_probs=90.9
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeec
Q 008457 359 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEW 438 (564)
Q Consensus 359 ~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w 438 (564)
.++..|.+.+.....+.++.+|||||||+|+++..++.. ..+|+++|+++.. . ...+.+...|.
T Consensus 8 Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~----~~~v~~~~~D~ 71 (191)
T 3dou_A 8 RAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------E----IAGVRFIRCDI 71 (191)
T ss_dssp HHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------C----CTTCEEEECCT
T ss_pred cHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------c----CCCeEEEEccc
Confidence 456677777666554557899999999999888877776 6799999998741 1 13567777776
Q ss_pred CCCccchhhhhhcC----CCccEEEEeceeeCC------------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 439 GNRDHIEAIKEENN----EGFEVILGTDVSYIP------------EAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 439 ~~~~~~~~~~~~~~----~~fD~Ii~~d~~y~~------------~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
.+......+..... ++||+|++. ...+. .....+++.+.++| +|+| .+++..-
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~D~Vlsd-~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~L-kpGG--------~lv~k~~- 140 (191)
T 3dou_A 72 FKETIFDDIDRALREEGIEKVDDVVSD-AMAKVSGIPSRDHAVSYQIGQRVMEIAVRYL-RNGG--------NVLLKQF- 140 (191)
T ss_dssp TSSSHHHHHHHHHHHHTCSSEEEEEEC-CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHE-EEEE--------EEEEEEE-
T ss_pred cCHHHHHHHHHHhhcccCCcceEEecC-CCcCCCCCcccCHHHHHHHHHHHHHHHHHHc-cCCC--------EEEEEEc-
Confidence 65432222222111 489999863 32211 12356788889999 9988 6665433
Q ss_pred ccCChhHHHHHHHHcCCeEEEEcCC
Q 008457 503 RQVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 503 r~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
+......+...++ ..|.-+++...
T Consensus 141 ~~~~~~~~~~~l~-~~F~~v~~~kP 164 (191)
T 3dou_A 141 QGDMTNDFIAIWR-KNFSSYKISKP 164 (191)
T ss_dssp CSTHHHHHHHHHG-GGEEEEEEECC
T ss_pred CCCCHHHHHHHHH-HhcCEEEEECC
Confidence 3333445666664 45777766644
No 418
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.98 E-value=4.6e-10 Score=117.13 Aligned_cols=111 Identities=19% Similarity=0.263 Sum_probs=84.8
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCc
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 442 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~ 442 (564)
.+.+.+.......++.+|||||||+|.++..++..+..+|+++|+++ +++.+++|+..|++. .++.+...|+.+..
T Consensus 145 ~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~---~~v~~~~~d~~~~~ 220 (480)
T 3b3j_A 145 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLT---DRIVVIPGKVEEVS 220 (480)
T ss_dssp HHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCT---TTEEEEESCTTTCC
T ss_pred HHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCC---CcEEEEECchhhCc
Confidence 34555555555557889999999999888877776667999999988 999999999998874 57888888776431
Q ss_pred cchhhhhhcCCCccEEEEeceeeCC--CChHHHHHHHHHHhhccCC
Q 008457 443 HIEAIKEENNEGFEVILGTDVSYIP--EAILPLFATAKELTASSNK 486 (564)
Q Consensus 443 ~~~~~~~~~~~~fD~Ii~~d~~y~~--~~~~~l~~~~~~ll~~~~g 486 (564)
+ +++||+|++..++|+. +.....+..+.++| +|+|
T Consensus 221 -------~-~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~L-kpgG 257 (480)
T 3b3j_A 221 -------L-PEQVDIIISEPMGYMLFNERMLESYLHAKKYL-KPSG 257 (480)
T ss_dssp -------C-SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGE-EEEE
T ss_pred -------c-CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhc-CCCC
Confidence 1 2589999987666653 33455666778899 9988
No 419
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.98 E-value=1.2e-09 Score=103.13 Aligned_cols=100 Identities=14% Similarity=0.091 Sum_probs=76.9
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
.++.+|||||||+|..+..++... ..+|+++|+++.+++.+++|+..+++. +++.+...|..+. +.....+
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-----~~~~~~~ 141 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFE---NQVRIIEGNALEQ-----FENVNDK 141 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCT---TTEEEEESCGGGC-----HHHHTTS
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEECCHHHH-----HHhhccC
Confidence 367899999999997777776643 579999999999999999999988764 4677766554321 1101257
Q ss_pred CccEEEEeceeeCCCChHHHHHHHHHHhhccCC
Q 008457 454 GFEVILGTDVSYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
+||+|++. ........+++.+.++| +|+|
T Consensus 142 ~fD~V~~~---~~~~~~~~~l~~~~~~L-kpgG 170 (232)
T 3ntv_A 142 VYDMIFID---AAKAQSKKFFEIYTPLL-KHQG 170 (232)
T ss_dssp CEEEEEEE---TTSSSHHHHHHHHGGGE-EEEE
T ss_pred CccEEEEc---CcHHHHHHHHHHHHHhc-CCCe
Confidence 99999843 34667889999999999 9988
No 420
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.97 E-value=1.5e-09 Score=101.30 Aligned_cols=111 Identities=15% Similarity=0.078 Sum_probs=81.5
Q ss_pred HHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCC--CEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccc
Q 008457 367 VLARNPTIVAGKKVLELGCGCGGICSMVAAGSA--DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 444 (564)
Q Consensus 367 ~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~--~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~ 444 (564)
.+.......++.+|||+|||+|.++..++...+ .+|+++|+++.+++.+++++..++. .++.+...|.... .
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~v~~~~~d~~~~--~ 141 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY----DNVIVIVGDGTLG--Y 141 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC----TTEEEEESCGGGC--C
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC----CCeEEEECCcccC--C
Confidence 333333455788999999999988877777653 6999999999999999999988765 3466665554211 1
Q ss_pred hhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 008457 445 EAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 445 ~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
...++||+|+++.++.+.. +.+.++| +|+| .+++.....
T Consensus 142 -----~~~~~fD~v~~~~~~~~~~------~~~~~~L-~pgG--------~lv~~~~~~ 180 (215)
T 2yxe_A 142 -----EPLAPYDRIYTTAAGPKIP------EPLIRQL-KDGG--------KLLMPVGRY 180 (215)
T ss_dssp -----GGGCCEEEEEESSBBSSCC------HHHHHTE-EEEE--------EEEEEESSS
T ss_pred -----CCCCCeeEEEECCchHHHH------HHHHHHc-CCCc--------EEEEEECCC
Confidence 0145899999988876543 5888999 9988 777776544
No 421
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.97 E-value=3.7e-09 Score=107.26 Aligned_cols=131 Identities=8% Similarity=0.035 Sum_probs=92.7
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCC-CEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~-~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
.++.+|||+| |+|.++..++..+. .+|+++|+++.+++.+++|+..+++ .++.+...|..+. + .....+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~----~~v~~~~~D~~~~--l---~~~~~~ 240 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY----EDIEIFTFDLRKP--L---PDYALH 240 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC----CCEEEECCCTTSC--C---CTTTSS
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCEEEEEChhhhh--c---hhhccC
Confidence 3688999999 99988888877665 7999999999999999999999876 2577776665431 1 011235
Q ss_pred CccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEE-EEEEeeccCCh---hHHHHHHH-HcCCeEEEEc
Q 008457 454 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAF-ILCHIFRQVDE---PSMLSAAT-QCGFRLVDKW 525 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~-~~~~~~r~~~~---~~~~~~~~-~~g~~~~~~~ 525 (564)
+||+|++. ..|.......+++.+.++| +|+| ++ +++...+..+. ..+.+.+. ..|+.+..++
T Consensus 241 ~fD~Vi~~-~p~~~~~~~~~l~~~~~~L-kpgG--------~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 307 (373)
T 2qm3_A 241 KFDTFITD-PPETLEAIRAFVGRGIATL-KGPR--------CAGYFGITRRESSLDKWREIQKLLLNEFNVVITDII 307 (373)
T ss_dssp CBSEEEEC-CCSSHHHHHHHHHHHHHTB-CSTT--------CEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred CccEEEEC-CCCchHHHHHHHHHHHHHc-ccCC--------eEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhhhh
Confidence 89999964 4454434688899999999 9976 33 44433322333 23445565 7899887664
No 422
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.96 E-value=4e-09 Score=109.06 Aligned_cols=109 Identities=21% Similarity=0.248 Sum_probs=81.0
Q ss_pred hhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCCCCCCc
Q 008457 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSS 146 (564)
Q Consensus 68 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~ 146 (564)
.+.+...++.+|||+|||+|.++..|++. +.+|+|+|+|+.+++.|+++....+ .+++|+++|+.......++++++
T Consensus 279 ~~~l~~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 279 LEWLDVQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp HHHHTCCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTC
T ss_pred HHhhcCCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCC
Confidence 34454567889999999999999999987 6799999999999999998875443 47999999986532112345678
Q ss_pred eeEEEEcccccCCChhHHHHHHHHHHhccCCCeEEEEE
Q 008457 147 IDIVTMVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 147 fD~V~~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
||+|+++---... ..+++.+.+ ++|++.++++
T Consensus 357 fD~Vv~dPPr~g~-----~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 357 FDKVLLDPARAGA-----AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp CSEEEECCCTTCC-----HHHHHHHHH-HCCSEEEEEE
T ss_pred CCEEEECCCCccH-----HHHHHHHHh-cCCCeEEEEE
Confidence 9999985332222 235555543 7899998886
No 423
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.96 E-value=5.3e-09 Score=104.60 Aligned_cols=169 Identities=14% Similarity=0.172 Sum_probs=104.7
Q ss_pred CCCeEEEEcCCccccHHHHHH--------hC-------CCcEEEEEeCChHHHHHHHhcccccC-------------CCe
Q 008457 75 GRKDVLEVGCGAGNTIFPLIA--------AY-------PDVFVYACDFSPRAVNLVMTHKDFTE-------------TRV 126 (564)
Q Consensus 75 ~~~~VLDiGcG~G~~~~~l~~--------~~-------~~~~v~~iD~s~~~l~~a~~~~~~~~-------------~~i 126 (564)
...+|+|+|||+|.++..+.. .+ |..+|..-|+........-+...... .+-
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 368999999999999987722 22 67899999987765433332222110 011
Q ss_pred eEEEecCCcccccCCCCCCceeEEEEcccccCCC--h----------------------------------hHHHHHHHH
Q 008457 127 STFVCDLISDDLSRQISPSSIDIVTMVFVLSAVS--P----------------------------------EKMSLVLQN 170 (564)
Q Consensus 127 ~~~~~d~~~~~~~~~~~~~~fD~V~~~~vl~~~~--~----------------------------------~~~~~~l~~ 170 (564)
-|+.+.-. .-....+|+++||+|+++.+|||++ + .|...+|+.
T Consensus 132 ~f~~gvpg-SFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 132 YFVAGVPG-SFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp SEEEEEES-CTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecCh-hhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 23333221 1122356899999999999999996 1 166778999
Q ss_pred HHhccCCCeEEEEEecCCCchhh------hhhc-cc----cccc-ccce----eecCCCceeeccCHHHHHHHHH-hCCC
Q 008457 171 IKKVLKPTGYVLFRDYAIGDLAQ------ERLT-GK----DQKI-SENF----YVRGDGTRAFYFSNDFLTSLFK-ENGF 233 (564)
Q Consensus 171 ~~r~LkpgG~lii~~~~~~~~~~------~~~~-~~----~~~~-~~~~----~~~~~~~~~~~~~~~~l~~~l~-~aGf 233 (564)
.++.|+|||.++++..+.++... .... .. ...+ .++. ....-....|+.+.++++..++ +.||
T Consensus 211 ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F 290 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSF 290 (374)
T ss_dssp HHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSE
T ss_pred HHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCc
Confidence 99999999999998776654210 0000 00 0000 0000 0000122345679999999998 5999
Q ss_pred cEEEeeeeecc
Q 008457 234 DVEELGLCCKQ 244 (564)
Q Consensus 234 ~~~~~~~~~~~ 244 (564)
.+..+.....+
T Consensus 291 ~I~~le~~~~~ 301 (374)
T 3b5i_A 291 AIDKLVVYKGG 301 (374)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEEeec
Confidence 99887765433
No 424
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.95 E-value=2.3e-09 Score=101.19 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=80.4
Q ss_pred HHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccc
Q 008457 365 AAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 444 (564)
Q Consensus 365 ~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~ 444 (564)
...+.......++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++|+..++ ++.+...|..+. .
T Consensus 59 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~------~v~~~~~d~~~~--~ 129 (231)
T 1vbf_A 59 GIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN------NIKLILGDGTLG--Y 129 (231)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS------SEEEEESCGGGC--C
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC------CeEEEECCcccc--c
Confidence 3344433345578899999999998887777765 799999999999999999987653 456665554321 1
Q ss_pred hhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 008457 445 EAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 445 ~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
...++||+|++..++++.. +.+.++| +|+| .+++.....
T Consensus 130 -----~~~~~fD~v~~~~~~~~~~------~~~~~~L-~pgG--------~l~~~~~~~ 168 (231)
T 1vbf_A 130 -----EEEKPYDRVVVWATAPTLL------CKPYEQL-KEGG--------IMILPIGVG 168 (231)
T ss_dssp -----GGGCCEEEEEESSBBSSCC------HHHHHTE-EEEE--------EEEEEECSS
T ss_pred -----ccCCCccEEEECCcHHHHH------HHHHHHc-CCCc--------EEEEEEcCC
Confidence 1246899999988876543 4688899 9988 777776544
No 425
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.95 E-value=1.4e-10 Score=110.27 Aligned_cols=98 Identities=16% Similarity=0.062 Sum_probs=75.6
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++|+..+++. .++.+...|+.+. ...++|
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~~--------~~~~~~ 145 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIA---DKIEFICGDFLLL--------ASFLKA 145 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCG---GGEEEEESCHHHH--------GGGCCC
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCC---cCeEEEECChHHh--------cccCCC
Confidence 67899999999998888887765 79999999999999999999988763 3577766554321 134699
Q ss_pred cEEEEeceeeCCCChHHHHHHHHHHhhccCC
Q 008457 456 EVILGTDVSYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 456 D~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
|+|++..++.+.......+..+.++| +|+|
T Consensus 146 D~v~~~~~~~~~~~~~~~~~~~~~~L-~pgG 175 (241)
T 3gdh_A 146 DVVFLSPPWGGPDYATAETFDIRTMM-SPDG 175 (241)
T ss_dssp SEEEECCCCSSGGGGGSSSBCTTTSC-SSCH
T ss_pred CEEEECCCcCCcchhhhHHHHHHhhc-CCcc
Confidence 99998776666555555666677778 8776
No 426
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.95 E-value=1.9e-09 Score=102.92 Aligned_cols=108 Identities=12% Similarity=0.081 Sum_probs=80.9
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc-
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN- 451 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~- 451 (564)
.++.+|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++.. +++.+...|..+ .+..+.
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~---~~v~~~~~d~~~-----~l~~~~~ 133 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD---QRVTLREGPALQ-----SLESLGE 133 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT---TTEEEEESCHHH-----HHHTCCS
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEEcCHHH-----HHHhcCC
Confidence 367899999999997777777653 569999999999999999999988874 467776554321 111121
Q ss_pred CCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 452 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 452 ~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
.++||+|++ |. .......+++.+.++| +|+| .+++....
T Consensus 134 ~~~fD~V~~-d~--~~~~~~~~l~~~~~~L-kpGG--------~lv~~~~~ 172 (248)
T 3tfw_A 134 CPAFDLIFI-DA--DKPNNPHYLRWALRYS-RPGT--------LIIGDNVV 172 (248)
T ss_dssp CCCCSEEEE-CS--CGGGHHHHHHHHHHTC-CTTC--------EEEEECCS
T ss_pred CCCeEEEEE-CC--chHHHHHHHHHHHHhc-CCCe--------EEEEeCCC
Confidence 348999986 33 3556788999999999 9988 77765444
No 427
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.94 E-value=2.4e-09 Score=99.67 Aligned_cols=126 Identities=14% Similarity=0.084 Sum_probs=90.4
Q ss_pred CCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
...+|||||||+|.++..++.. ...+|+++|+|+.+++.++.|+..|+.. ..+...|.... .+.++
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~-----~~~~v~D~~~~--------~p~~~ 198 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP-----HRTNVADLLED--------RLDEP 198 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC-----EEEEECCTTTS--------CCCSC
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-----ceEEEeeeccc--------CCCCC
Confidence 4569999999999888777765 4669999999999999999999999863 45554544322 35679
Q ss_pred ccEEEEeceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----cCCh-----hHHHHHHHHcCCeEE
Q 008457 455 FEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----QVDE-----PSMLSAATQCGFRLV 522 (564)
Q Consensus 455 fD~Ii~~d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-----~~~~-----~~~~~~~~~~g~~~~ 522 (564)
||+|++..++..-+ .-..++ .+-+.| +++ .++++++.| .... ..|...+.+.|+.+.
T Consensus 199 ~DvaL~lkti~~Le~q~kg~g~-~ll~aL-~~~---------~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~ 267 (281)
T 3lcv_B 199 ADVTLLLKTLPCLETQQRGSGW-EVIDIV-NSP---------NIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQ 267 (281)
T ss_dssp CSEEEETTCHHHHHHHSTTHHH-HHHHHS-SCS---------EEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEE
T ss_pred cchHHHHHHHHHhhhhhhHHHH-HHHHHh-CCC---------CEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCcee
Confidence 99999998876632 233445 566677 554 588888884 3332 245555677899887
Q ss_pred EEc
Q 008457 523 DKW 525 (564)
Q Consensus 523 ~~~ 525 (564)
++-
T Consensus 268 ~~~ 270 (281)
T 3lcv_B 268 RLE 270 (281)
T ss_dssp EEE
T ss_pred eee
Confidence 765
No 428
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.94 E-value=5.3e-09 Score=108.16 Aligned_cols=143 Identities=15% Similarity=0.106 Sum_probs=97.8
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecC
Q 008457 360 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWG 439 (564)
Q Consensus 360 ~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~ 439 (564)
.+..+.+++.......++.+|||||||+|.++..++.. ..+|+++|+++.+++.+++|+..|++ .++.+...|+.
T Consensus 270 ~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~----~~v~f~~~d~~ 344 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGL----QNVTFYHENLE 344 (433)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTC----CSEEEEECCTT
T ss_pred HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCC----CceEEEECCHH
Confidence 34555666555434456789999999999888877766 67999999999999999999999886 36788777776
Q ss_pred CCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCC
Q 008457 440 NRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGF 519 (564)
Q Consensus 440 ~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~ 519 (564)
+.. ..+ ++..++||+|++ |..|... ..+++.+.. + +|++ .+|++....... .-...+.+.|+
T Consensus 345 ~~l--~~~-~~~~~~fD~Vv~-dPPr~g~--~~~~~~l~~-~-~p~~--------ivyvsc~p~tla--rd~~~l~~~Gy 406 (433)
T 1uwv_A 345 EDV--TKQ-PWAKNGFDKVLL-DPARAGA--AGVMQQIIK-L-EPIR--------IVYVSCNPATLA--RDSEALLKAGY 406 (433)
T ss_dssp SCC--SSS-GGGTTCCSEEEE-CCCTTCC--HHHHHHHHH-H-CCSE--------EEEEESCHHHHH--HHHHHHHHTTC
T ss_pred HHh--hhh-hhhcCCCCEEEE-CCCCccH--HHHHHHHHh-c-CCCe--------EEEEECChHHHH--hhHHHHHHCCc
Confidence 421 110 234568999885 6666543 356665554 4 5544 777765444322 22455567899
Q ss_pred eEEEEc
Q 008457 520 RLVDKW 525 (564)
Q Consensus 520 ~~~~~~ 525 (564)
++.++.
T Consensus 407 ~~~~~~ 412 (433)
T 1uwv_A 407 TIARLA 412 (433)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998864
No 429
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.93 E-value=3.2e-09 Score=105.26 Aligned_cols=111 Identities=17% Similarity=0.058 Sum_probs=82.0
Q ss_pred HHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCC--CEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCc
Q 008457 365 AAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSA--DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 442 (564)
Q Consensus 365 ~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~--~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~ 442 (564)
...+.......++.+|||+|||+|.++..++..++ .+|+++|+++++++.+++|+..++.. ++.+...|..+.
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~----~v~~~~~d~~~~- 138 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE----NVIFVCGDGYYG- 138 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEESCGGGC-
T ss_pred HHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CeEEEECChhhc-
Confidence 44444434455788999999999988877776543 47999999999999999999988763 477766665432
Q ss_pred cchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 008457 443 HIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 501 (564)
Q Consensus 443 ~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~ 501 (564)
. ...++||+|++..++.+.. +.+.++| +|+| .+++...
T Consensus 139 -~-----~~~~~fD~Iv~~~~~~~~~------~~~~~~L-kpgG--------~lvi~~~ 176 (317)
T 1dl5_A 139 -V-----PEFSPYDVIFVTVGVDEVP------ETWFTQL-KEGG--------RVIVPIN 176 (317)
T ss_dssp -C-----GGGCCEEEEEECSBBSCCC------HHHHHHE-EEEE--------EEEEEBC
T ss_pred -c-----ccCCCeEEEEEcCCHHHHH------HHHHHhc-CCCc--------EEEEEEC
Confidence 1 1236899999888776543 6788899 9988 7776644
No 430
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.93 E-value=2.1e-09 Score=106.50 Aligned_cols=116 Identities=19% Similarity=0.155 Sum_probs=83.1
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCC---CCCceEEEEeecCCCccchhhhhhcC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPP---FLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~---~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
++.+|||||||+|.++..++.....+|+++|+++.+++.++++...+.... ...++.+...|..+....+.+ +...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKF-RDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTC-SSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhc-ccCC
Confidence 677999999999988887777667799999999999999999887643100 113567776666543210000 0123
Q ss_pred CCccEEEEeceeeCC----CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 008457 453 EGFEVILGTDVSYIP----EAILPLFATAKELTASSNKSLREDQQPAFILCHI 501 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~----~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~ 501 (564)
++||+|+++.++.+. .....+++.+.++| +|+| .++++..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L-kpgG--------~li~~~~ 156 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERL-SPGG--------YFIGTTP 156 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTE-EEEE--------EEEEEEE
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHh-CCCc--------EEEEecC
Confidence 589999999988654 34578999999999 9988 7777655
No 431
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.92 E-value=8.5e-09 Score=98.28 Aligned_cols=127 Identities=9% Similarity=0.058 Sum_probs=85.1
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCC-CEEEEEcCChhHHHHHHHHHHhc--------CCCCCCCceEEEEeecCCCccch
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTAN--------LKPPFLAKLITKRLEWGNRDHIE 445 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~-~~v~~tD~~~~~l~~~~~n~~~n--------~~~~~~~~i~~~~l~w~~~~~~~ 445 (564)
.++.+|||+|||+|.++..++..++ .+|+++|+++.+++.+++|+..+ +. .++.+...|..+. +.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~----~nv~~~~~D~~~~--l~ 121 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF----QNINVLRGNAMKF--LP 121 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT----TTEEEEECCTTSC--GG
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC----CcEEEEeccHHHH--HH
Confidence 3677999999999988888887764 48999999999999999998876 33 3577766655431 11
Q ss_pred hhhhhcCCCccEEEEec--eeeCC------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHc
Q 008457 446 AIKEENNEGFEVILGTD--VSYIP------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQC 517 (564)
Q Consensus 446 ~~~~~~~~~fD~Ii~~d--~~y~~------~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 517 (564)
. .+..+.+|.|+... ..+.. .....+++.+.++| +|+| .+++........ ..+.+.+...
T Consensus 122 ~--~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~L-kpgG--------~l~~~td~~~~~-~~~~~~~~~~ 189 (246)
T 2vdv_E 122 N--FFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVL-KEGG--------VVYTITDVKDLH-EWMVKHLEEH 189 (246)
T ss_dssp G--TSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHE-EEEE--------EEEEEESCHHHH-HHHHHHHHHS
T ss_pred H--hccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHc-CCCC--------EEEEEeccHHHH-HHHHHHHHhC
Confidence 0 13456899887442 11100 01268999999999 9988 777754333211 1234455566
Q ss_pred CC
Q 008457 518 GF 519 (564)
Q Consensus 518 g~ 519 (564)
|+
T Consensus 190 ~~ 191 (246)
T 2vdv_E 190 PL 191 (246)
T ss_dssp TT
T ss_pred cC
Confidence 64
No 432
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.92 E-value=3.4e-09 Score=105.79 Aligned_cols=98 Identities=13% Similarity=0.208 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (564)
.++.+|||+|||+|.++.. ++ .+.+|+++|+|+.+++.|+++....+ .+++++++|+... . ++||+|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~------~-~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV------D-VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC------C-CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh------c-CCCcEEE
Confidence 4788999999999999998 76 37899999999999999998875444 4799999998642 2 7899999
Q ss_pred EcccccCCChhHHHHHHHHHHhccCCCeEEEEEecC
Q 008457 152 MVFVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRDYA 187 (564)
Q Consensus 152 ~~~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~~~ 187 (564)
+.-. + ....++..+.++|+|||.+++.+..
T Consensus 264 ~dpP--~----~~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 264 MNLP--K----FAHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp ECCT--T----TGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ECCc--H----hHHHHHHHHHHHcCCCCEEEEEEee
Confidence 8532 1 1236899999999999999987544
No 433
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.91 E-value=2.3e-09 Score=100.56 Aligned_cols=130 Identities=11% Similarity=0.108 Sum_probs=83.1
Q ss_pred CCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCC-hhHHHHH---HHHHHhcCCCCCCCceEEEEeecCCCccchhhhhh
Q 008457 376 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGD-SIALDLL---AQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE 450 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~-~~~l~~~---~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~ 450 (564)
++.+|||||||+|.++..++.. ...+|+++|+| +.+++.+ ++++..++. .++.+...+..+.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~----~~v~~~~~d~~~l--------- 90 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL----SNVVFVIAAAESL--------- 90 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC----SSEEEECCBTTBC---------
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC----CCeEEEEcCHHHh---------
Confidence 6679999999999777777653 45689999999 6666665 777766554 3466655554322
Q ss_pred cCCCccEEEEeceeeCC--------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----------c---CChh
Q 008457 451 NNEGFEVILGTDVSYIP--------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----------Q---VDEP 508 (564)
Q Consensus 451 ~~~~fD~Ii~~d~~y~~--------~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-----------~---~~~~ 508 (564)
+...+|+|.+.-+.+.. ...+.+++.+.++| +|+| .++++.... . ....
T Consensus 91 ~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~L-kpGG--------~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 161 (225)
T 3p2e_A 91 PFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLA-KKEA--------HFEFVTTYSDSYEEAEIKKRGLPLLSKA 161 (225)
T ss_dssp CGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTE-EEEE--------EEEEEECCCC--------------CCHH
T ss_pred hhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhc-CCCc--------EEEEEEeccccchhchhhhcCCCCCChh
Confidence 11123544433333321 12456899999999 9988 777622211 0 1111
Q ss_pred -----HHHHHHHHcCCeEEEEcCC
Q 008457 509 -----SMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 509 -----~~~~~~~~~g~~~~~~~~~ 527 (564)
.+.+.++++||++.++...
T Consensus 162 ~~~~~el~~~l~~aGf~v~~~~~~ 185 (225)
T 3p2e_A 162 YFLSEQYKAELSNSGFRIDDVKEL 185 (225)
T ss_dssp HHHSHHHHHHHHHHTCEEEEEEEE
T ss_pred hcchHHHHHHHHHcCCCeeeeeec
Confidence 2667788899999988644
No 434
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.91 E-value=5.7e-09 Score=100.99 Aligned_cols=137 Identities=12% Similarity=0.101 Sum_probs=90.8
Q ss_pred CCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHHHHHHHhc--CCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 376 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTAN--LKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~~~n~~~n--~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.+++|||||||+|.++..++.. +..+|+++|+++.+++.+++|+... +. ...++++..-|. .+.+ +...
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~--~~~rv~v~~~D~-----~~~l-~~~~ 146 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL--DDPRVDVQVDDG-----FMHI-AKSE 146 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT--TSTTEEEEESCS-----HHHH-HTCC
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc--CCCceEEEECcH-----HHHH-hhCC
Confidence 5689999999999888888776 4579999999999999999997542 22 124666664432 1111 1135
Q ss_pred CCccEEEEeceeeCCC-----ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCCh---hHHHHHHHHcCCeEEEE
Q 008457 453 EGFEVILGTDVSYIPE-----AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE---PSMLSAATQCGFRLVDK 524 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~-----~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~---~~~~~~~~~~g~~~~~~ 524 (564)
++||+|++ |..+... ....+++.+.++| +|+| ++++......... ....+.+++. |.....
T Consensus 147 ~~fD~Ii~-d~~~~~~~~~~l~~~~~~~~~~~~L-~pgG--------~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 215 (275)
T 1iy9_A 147 NQYDVIMV-DSTEPVGPAVNLFTKGFYAGIAKAL-KEDG--------IFVAQTDNPWFTPELITNVQRDVKEI-FPITKL 215 (275)
T ss_dssp SCEEEEEE-SCSSCCSCCCCCSTTHHHHHHHHHE-EEEE--------EEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEE
T ss_pred CCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhc-CCCc--------EEEEEcCCccccHHHHHHHHHHHHHh-CCCeEE
Confidence 68999996 6544221 1367999999999 9988 7766543322222 3455666555 665556
Q ss_pred cCCCCCC
Q 008457 525 WPSKNSA 531 (564)
Q Consensus 525 ~~~~~~~ 531 (564)
+....|.
T Consensus 216 ~~~~vp~ 222 (275)
T 1iy9_A 216 YTANIPT 222 (275)
T ss_dssp EEECCTT
T ss_pred EEEecCc
Confidence 5444444
No 435
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.91 E-value=4.1e-09 Score=106.04 Aligned_cols=129 Identities=12% Similarity=0.063 Sum_probs=94.2
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhcCC-CEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 451 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~~~-~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~ 451 (564)
...++.+|||+|||+|.++..++.... .+++++|+ +.++. ++++...+. .+++.+...|..+ +++
T Consensus 181 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~---~~~v~~~~~d~~~--------~~p 246 (348)
T 3lst_A 181 DFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDV---AGRWKVVEGDFLR--------EVP 246 (348)
T ss_dssp CCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGG---TTSEEEEECCTTT--------CCC
T ss_pred CccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCC---CCCeEEEecCCCC--------CCC
Confidence 344678999999999988877777654 48999999 55555 333222222 2568888777642 123
Q ss_pred CCCccEEEEeceeeCCCCh--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----------------------cCC
Q 008457 452 NEGFEVILGTDVSYIPEAI--LPLFATAKELTASSNKSLREDQQPAFILCHIFR-----------------------QVD 506 (564)
Q Consensus 452 ~~~fD~Ii~~d~~y~~~~~--~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r-----------------------~~~ 506 (564)
+||+|++..++++..+. ..+++.+.++| +|+| .+++..... ..+
T Consensus 247 --~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L-kpgG--------~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t 315 (348)
T 3lst_A 247 --HADVHVLKRILHNWGDEDSVRILTNCRRVM-PAHG--------RVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERT 315 (348)
T ss_dssp --CCSEEEEESCGGGSCHHHHHHHHHHHHHTC-CTTC--------EEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCB
T ss_pred --CCcEEEEehhccCCCHHHHHHHHHHHHHhc-CCCC--------EEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCC
Confidence 89999999999887766 69999999999 9988 777754321 113
Q ss_pred hhHHHHHHHHcCCeEEEEcC
Q 008457 507 EPSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 507 ~~~~~~~~~~~g~~~~~~~~ 526 (564)
..++.+.++++||++++++.
T Consensus 316 ~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 316 AAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp HHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEE
Confidence 34677888999999999985
No 436
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.91 E-value=5e-09 Score=104.87 Aligned_cols=133 Identities=11% Similarity=0.083 Sum_probs=85.0
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhc-CC-CEEEEEcCChhHHHHHHHHHHh-------cCCCCCCCceEEEEeecCCCcc
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAG-SA-DLVVATDGDSIALDLLAQNVTA-------NLKPPFLAKLITKRLEWGNRDH 443 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~-~~-~~v~~tD~~~~~l~~~~~n~~~-------n~~~~~~~~i~~~~l~w~~~~~ 443 (564)
.+.++.+|||+|||+|.++..++.. ++ .+|+++|+++.+++.+++|+.. |+......++.+...|..+..
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~- 180 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT- 180 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc-
Confidence 3457889999999999888887775 44 7999999999999999999984 433211246777666654321
Q ss_pred chhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHH--cCCeE
Q 008457 444 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQ--CGFRL 521 (564)
Q Consensus 444 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~--~g~~~ 521 (564)
.++..++||+|++. + .....+++.+.++| +|+| .+++...... ....+++.+.+ .+|..
T Consensus 181 ----~~~~~~~fD~V~~~-~----~~~~~~l~~~~~~L-kpgG--------~lv~~~~~~~-~~~~~~~~l~~~~~~~~~ 241 (336)
T 2b25_A 181 ----EDIKSLTFDAVALD-M----LNPHVTLPVFYPHL-KHGG--------VCAVYVVNIT-QVIELLDGIRTCELALSC 241 (336)
T ss_dssp -----------EEEEEEC-S----SSTTTTHHHHGGGE-EEEE--------EEEEEESSHH-HHHHHHHHHHHHTCCEEE
T ss_pred ----cccCCCCeeEEEEC-C----CCHHHHHHHHHHhc-CCCc--------EEEEEeCCHH-HHHHHHHHHHhcCCCccc
Confidence 12344589999863 2 23344789999999 9988 6665544322 12244555543 34444
Q ss_pred EEEc
Q 008457 522 VDKW 525 (564)
Q Consensus 522 ~~~~ 525 (564)
..+.
T Consensus 242 ~~~~ 245 (336)
T 2b25_A 242 EKIS 245 (336)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 4444
No 437
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.90 E-value=8.7e-09 Score=97.29 Aligned_cols=129 Identities=11% Similarity=0.044 Sum_probs=83.7
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcC--CCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANL--KPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~--~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
++.+|||||||+|.++..++... ...|+++|+++.+++.+++|+.... ......++.+...|..+. +.. .+..
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~--l~~--~~~~ 121 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH--LPN--FFYK 121 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC--HHH--HCCT
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh--hhh--hCCC
Confidence 55689999999998888877765 4689999999999999998876410 000114577766655421 110 1456
Q ss_pred CCccEEEEe--ceeeCC------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcC
Q 008457 453 EGFEVILGT--DVSYIP------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCG 518 (564)
Q Consensus 453 ~~fD~Ii~~--d~~y~~------~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g 518 (564)
++||.|+.. |..+.. ...+.+++.+.++| +|+| .+++........ ..+.+.+.+.|
T Consensus 122 ~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~L-kpGG--------~l~~~td~~~~~-~~~~~~l~~~~ 185 (235)
T 3ckk_A 122 GQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVL-RVGG--------LVYTITDVLELH-DWMCTHFEEHP 185 (235)
T ss_dssp TCEEEEEEESCC-----------CCCHHHHHHHHHHE-EEEE--------EEEEEESCHHHH-HHHHHHHHTST
T ss_pred cCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHC-CCCC--------EEEEEeCCHHHH-HHHHHHHHHCC
Confidence 789998753 111100 01257999999999 9988 887775543222 23455566666
No 438
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.90 E-value=6.9e-09 Score=111.30 Aligned_cols=111 Identities=11% Similarity=0.068 Sum_probs=82.2
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCC--CEEEEEcCChhHHHHHHHHHHhcCC--CCCCCceEEEEeecCCCccchhhhhh
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSA--DLVVATDGDSIALDLLAQNVTANLK--PPFLAKLITKRLEWGNRDHIEAIKEE 450 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~--~~v~~tD~~~~~l~~~~~n~~~n~~--~~~~~~i~~~~l~w~~~~~~~~~~~~ 450 (564)
.++.+|||||||+|.++..++..++ .+|+++|+++.+++.+++++..... .....++.+...|..+. +.
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL-------p~ 792 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF-------DS 792 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC-------CT
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC-------Cc
Confidence 3778999999999987777776653 6999999999999999987764311 11124577766665432 23
Q ss_pred cCCCccEEEEeceeeCCCChH--HHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 451 NNEGFEVILGTDVSYIPEAIL--PLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 451 ~~~~fD~Ii~~d~~y~~~~~~--~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
..++||+|++.+++.+..... .+++.+.++| +|+ .++++.+.
T Consensus 793 ~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvL-KPG---------~LIISTPN 836 (950)
T 3htx_A 793 RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLF-HPK---------LLIVSTPN 836 (950)
T ss_dssp TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTT-CCS---------EEEEEECB
T ss_pred ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHc-CCC---------EEEEEecC
Confidence 457899999999999876544 5899999999 873 56666543
No 439
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.90 E-value=3.2e-09 Score=100.39 Aligned_cols=104 Identities=13% Similarity=0.055 Sum_probs=79.2
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc-CC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN-NE 453 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~-~~ 453 (564)
++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++|+..++.. .++.+...|..+. +.... ++
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-----~~~~~~~~ 125 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLE---SRIELLFGDALQL-----GEKLELYP 125 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCT---TTEEEECSCGGGS-----HHHHTTSC
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEECCHHHH-----HHhcccCC
Confidence 67799999999998877777654 579999999999999999999988763 4566665544321 11111 46
Q ss_pred CccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEE
Q 008457 454 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILC 499 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~ 499 (564)
+||+|++... ......+++.+.++| +|+| .+++.
T Consensus 126 ~fD~I~~~~~---~~~~~~~l~~~~~~L-~pgG--------~lv~~ 159 (233)
T 2gpy_A 126 LFDVLFIDAA---KGQYRRFFDMYSPMV-RPGG--------LILSD 159 (233)
T ss_dssp CEEEEEEEGG---GSCHHHHHHHHGGGE-EEEE--------EEEEE
T ss_pred CccEEEECCC---HHHHHHHHHHHHHHc-CCCe--------EEEEE
Confidence 8999997544 247889999999999 9988 77665
No 440
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.90 E-value=2.9e-09 Score=106.32 Aligned_cols=110 Identities=13% Similarity=0.112 Sum_probs=78.1
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHHHHHHH-------hcCCCCCCCceEEEEeecCCCccc
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVT-------ANLKPPFLAKLITKRLEWGNRDHI 444 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~~~n~~-------~n~~~~~~~~i~~~~l~w~~~~~~ 444 (564)
.+.++.+|||||||+|.++..++.. ++.+|+++|+++.+++.+++|++ .+++. ..++.+..-|..+.+ +
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~--~~rVefi~GD~~~lp-~ 246 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK--HAEYTLERGDFLSEE-W 246 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC--CCEEEEEECCTTSHH-H
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC--CCCeEEEECcccCCc-c
Confidence 4558889999999999888777755 44579999999999999998763 33431 146777666654321 1
Q ss_pred hhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEE
Q 008457 445 EAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILC 499 (564)
Q Consensus 445 ~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~ 499 (564)
. . .-..||+|+++.++| .......+..+.+.| +|+| +++++
T Consensus 247 ~---d-~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvL-KPGG--------rIVss 287 (438)
T 3uwp_A 247 R---E-RIANTSVIFVNNFAF-GPEVDHQLKERFANM-KEGG--------RIVSS 287 (438)
T ss_dssp H---H-HHHTCSEEEECCTTC-CHHHHHHHHHHHTTS-CTTC--------EEEES
T ss_pred c---c-ccCCccEEEEccccc-CchHHHHHHHHHHcC-CCCc--------EEEEe
Confidence 0 0 013799999876654 456667777888999 9988 77655
No 441
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.89 E-value=4.1e-09 Score=107.51 Aligned_cols=112 Identities=14% Similarity=0.098 Sum_probs=79.7
Q ss_pred CCCCCCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHH-------HHHHHhcCCCCCCCceEEEEe-ecCCCc
Q 008457 372 PTIVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLL-------AQNVTANLKPPFLAKLITKRL-EWGNRD 442 (564)
Q Consensus 372 ~~~~~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~-------~~n~~~n~~~~~~~~i~~~~l-~w~~~~ 442 (564)
..+.++.+|||||||+|.++..++.. ++.+|+++|+++.+++.+ ++|+..+++.. .++.+..- ++...
T Consensus 238 l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~--~nV~~i~gD~~~~~- 314 (433)
T 1u2z_A 238 CQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRL--NNVEFSLKKSFVDN- 314 (433)
T ss_dssp TTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCC--CCEEEEESSCSTTC-
T ss_pred cCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCC--CceEEEEcCccccc-
Confidence 34558889999999999888877775 456899999999999988 88888776321 35655432 22111
Q ss_pred cchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEE
Q 008457 443 HIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILC 499 (564)
Q Consensus 443 ~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~ 499 (564)
..+. ...++||+|+++.+++ .......++.+.+.| +|+| .+++.
T Consensus 315 --~~~~-~~~~~FDvIvvn~~l~-~~d~~~~L~el~r~L-KpGG--------~lVi~ 358 (433)
T 1u2z_A 315 --NRVA-ELIPQCDVILVNNFLF-DEDLNKKVEKILQTA-KVGC--------KIISL 358 (433)
T ss_dssp --HHHH-HHGGGCSEEEECCTTC-CHHHHHHHHHHHTTC-CTTC--------EEEES
T ss_pred --cccc-cccCCCCEEEEeCccc-cccHHHHHHHHHHhC-CCCe--------EEEEe
Confidence 0010 0135899999877774 356777889999999 9988 66665
No 442
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.89 E-value=1.2e-08 Score=98.75 Aligned_cols=132 Identities=14% Similarity=0.088 Sum_probs=87.6
Q ss_pred CCCCeEEEeCCcccHHHHHHHhc--CCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~--~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.++.+|||+|||+|+.+..++.. +..+|+++|+++.+++.+++|+..++. .++.+...|..+. ........
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~----~~v~~~~~D~~~~---~~~~~~~~ 154 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV----LNTIIINADMRKY---KDYLLKNE 154 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC----CSEEEEESCHHHH---HHHHHHTT
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC----CcEEEEeCChHhc---chhhhhcc
Confidence 47789999999999988887774 347999999999999999999998876 3466654443211 00000025
Q ss_pred CCccEEEEeceeeCC-------------------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--cCChhHHH
Q 008457 453 EGFEVILGTDVSYIP-------------------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFR--QVDEPSML 511 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~-------------------~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r--~~~~~~~~ 511 (564)
++||+|++ |..+.. .....+++.+.++| +|+| .++++...- .+.+ ..+
T Consensus 155 ~~fD~Vl~-d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~lv~stcs~~~~ene-~~v 223 (274)
T 3ajd_A 155 IFFDKILL-DAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLL-KKDG--------ELVYSTCSMEVEENE-EVI 223 (274)
T ss_dssp CCEEEEEE-EECCC------------HHHHTGGGTCHHHHHHHHHHHE-EEEE--------EEEEEESCCCTTSSH-HHH
T ss_pred ccCCEEEE-cCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhC-CCCC--------EEEEEECCCChHHhH-HHH
Confidence 68999985 433321 45578999999999 9988 666654432 2233 333
Q ss_pred HH-HHH-cCCeEEEE
Q 008457 512 SA-ATQ-CGFRLVDK 524 (564)
Q Consensus 512 ~~-~~~-~g~~~~~~ 524 (564)
+. +++ .+|++..+
T Consensus 224 ~~~l~~~~~~~~~~~ 238 (274)
T 3ajd_A 224 KYILQKRNDVELIII 238 (274)
T ss_dssp HHHHHHCSSEEEECC
T ss_pred HHHHHhCCCcEEecC
Confidence 33 333 36666554
No 443
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.89 E-value=3e-09 Score=104.28 Aligned_cols=87 Identities=20% Similarity=0.221 Sum_probs=65.0
Q ss_pred hHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC-CCeeEEEecCCcccccCC
Q 008457 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQ 141 (564)
Q Consensus 63 ~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~ 141 (564)
+...+.+.+...++.+|||||||+|.++..|++. +.+|+|+|+++.+++.|+++....+ .+++++++|+...
T Consensus 30 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~----- 102 (299)
T 2h1r_A 30 ILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT----- 102 (299)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSS-----
T ss_pred HHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhC-----
Confidence 3445555566678899999999999999999987 6799999999999999998764322 5789999998643
Q ss_pred CCCCceeEEEEccccc
Q 008457 142 ISPSSIDIVTMVFVLS 157 (564)
Q Consensus 142 ~~~~~fD~V~~~~vl~ 157 (564)
+..+||+|+++...+
T Consensus 103 -~~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 103 -VFPKFDVCTANIPYK 117 (299)
T ss_dssp -CCCCCSEEEEECCGG
T ss_pred -CcccCCEEEEcCCcc
Confidence 234899999976544
No 444
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.89 E-value=3.9e-09 Score=99.11 Aligned_cols=107 Identities=12% Similarity=0.072 Sum_probs=79.5
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.++.+|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++.. +++.+...|..+ .+..+..
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~-----~~~~~~~ 134 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS---DKIGLRLSPAKD-----TLAELIH 134 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEESCHHH-----HHHHHHT
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC---CceEEEeCCHHH-----HHHHhhh
Confidence 367799999999997777777653 579999999999999999999988764 457776554421 1112221
Q ss_pred ----CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 008457 453 ----EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 501 (564)
Q Consensus 453 ----~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~ 501 (564)
++||+|+. |. .......+++.+.++| +|+| .+++...
T Consensus 135 ~~~~~~fD~v~~-~~--~~~~~~~~l~~~~~~L-~pgG--------~lv~~~~ 175 (225)
T 3tr6_A 135 AGQAWQYDLIYI-DA--DKANTDLYYEESLKLL-REGG--------LIAVDNV 175 (225)
T ss_dssp TTCTTCEEEEEE-CS--CGGGHHHHHHHHHHHE-EEEE--------EEEEECS
T ss_pred ccCCCCccEEEE-CC--CHHHHHHHHHHHHHhc-CCCc--------EEEEeCC
Confidence 68999983 22 3456888999999999 9988 7766443
No 445
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.89 E-value=6e-09 Score=99.26 Aligned_cols=99 Identities=14% Similarity=0.073 Sum_probs=74.6
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhh---
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE--- 450 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~--- 450 (564)
++++|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+..-|.. +.+..+
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~---~~i~~~~gda~-----~~l~~l~~~ 150 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD---HKIDFREGPAL-----PVLDEMIKD 150 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG---GGEEEEESCHH-----HHHHHHHHS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CCeEEEECCHH-----HHHHHHHhc
Confidence 56799999999997777766643 469999999999999999999987763 45666544332 111122
Q ss_pred --cCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCC
Q 008457 451 --NNEGFEVILGTDVSYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 451 --~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
..++||+|++. . .......+++.+.++| +|+|
T Consensus 151 ~~~~~~fD~V~~d-~--~~~~~~~~l~~~~~~L-kpGG 184 (247)
T 1sui_A 151 EKNHGSYDFIFVD-A--DKDNYLNYHKRLIDLV-KVGG 184 (247)
T ss_dssp GGGTTCBSEEEEC-S--CSTTHHHHHHHHHHHB-CTTC
T ss_pred cCCCCCEEEEEEc-C--chHHHHHHHHHHHHhC-CCCe
Confidence 15789999853 2 2567889999999999 9988
No 446
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.89 E-value=8.9e-09 Score=94.76 Aligned_cols=117 Identities=13% Similarity=0.028 Sum_probs=76.8
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
.++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++|+. ++.+...|..+ + +++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~---------~-~~~ 110 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSE---------I-SGK 110 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGG---------C-CCC
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHH---------C-CCC
Confidence 4778999999999988887777766689999999999999999865 23444443321 1 258
Q ss_pred ccEEEEeceeeCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 455 FEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 455 fD~Ii~~d~~y~~~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
||+|+++.++++... ...+++.+.+++ | .++++.... +...+.+.+.+.| ++..+.
T Consensus 111 ~D~v~~~~p~~~~~~~~~~~~l~~~~~~~----g--------~~~~~~~~~--~~~~~~~~~~~~g-~~~~~~ 168 (200)
T 1ne2_A 111 YDTWIMNPPFGSVVKHSDRAFIDKAFETS----M--------WIYSIGNAK--ARDFLRREFSARG-DVFREE 168 (200)
T ss_dssp EEEEEECCCC-------CHHHHHHHHHHE----E--------EEEEEEEGG--GHHHHHHHHHHHE-EEEEEE
T ss_pred eeEEEECCCchhccCchhHHHHHHHHHhc----C--------cEEEEEcCc--hHHHHHHHHHHCC-CEEEEE
Confidence 999997766555432 234555555555 3 455554332 2334566777788 777664
No 447
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.88 E-value=4.1e-09 Score=104.25 Aligned_cols=138 Identities=15% Similarity=0.090 Sum_probs=90.3
Q ss_pred CCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHHHHHHHh--cCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 376 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTA--NLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~~~n~~~--n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.+.+|||||||+|.++..++.. ...+|+++|+|+.+++.+++|+.. ++.. ..++++..-|+.+ .+ +...
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~--~~~v~~~~~D~~~-----~l-~~~~ 187 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE--DKRVNVFIEDASK-----FL-ENVT 187 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG--STTEEEEESCHHH-----HH-HHCC
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC--CCcEEEEEccHHH-----HH-hhcC
Confidence 5679999999999888887766 357999999999999999999765 2221 2456666554321 11 1235
Q ss_pred CCccEEEEeceee--C-CCC-h-HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCCh---hHHHHHHHHcCCeEEEE
Q 008457 453 EGFEVILGTDVSY--I-PEA-I-LPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE---PSMLSAATQCGFRLVDK 524 (564)
Q Consensus 453 ~~fD~Ii~~d~~y--~-~~~-~-~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~---~~~~~~~~~~g~~~~~~ 524 (564)
++||+|++ |... . ... . ..+++.+.++| +|+| .+++......... ..+.+.+++. |...+.
T Consensus 188 ~~fDvIi~-d~~~p~~~~~~l~~~~~l~~~~~~L-kpgG--------~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 256 (321)
T 2pt6_A 188 NTYDVIIV-DSSDPIGPAETLFNQNFYEKIYNAL-KPNG--------YCVAQCESLWIHVGTIKNMIGYAKKL-FKKVEY 256 (321)
T ss_dssp SCEEEEEE-ECCCSSSGGGGGSSHHHHHHHHHHE-EEEE--------EEEEEECCTTTCHHHHHHHHHHHHTT-CSEEEE
T ss_pred CCceEEEE-CCcCCCCcchhhhHHHHHHHHHHhc-CCCc--------EEEEEcCCcccCHHHHHHHHHHHHHH-CCCeEE
Confidence 68999996 3321 1 111 1 78999999999 9988 7777544332222 3455666554 555555
Q ss_pred cCCCCCCC
Q 008457 525 WPSKNSAS 532 (564)
Q Consensus 525 ~~~~~~~~ 532 (564)
+....|..
T Consensus 257 ~~~~vp~~ 264 (321)
T 2pt6_A 257 ANISIPTY 264 (321)
T ss_dssp EEEECTTS
T ss_pred EEEEeccc
Confidence 54444443
No 448
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.86 E-value=4.3e-09 Score=99.62 Aligned_cols=106 Identities=12% Similarity=0.051 Sum_probs=77.9
Q ss_pred CCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 373 TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 373 ~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
...++.+|||+|||+|.++..++...+.+|+++|+++.+++.+++|+..++. .++.+...|... ... ..
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~v~~~~~d~~~--~~~-----~~ 156 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGV----KNVHVILGDGSK--GFP-----PK 156 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTC----CSEEEEESCGGG--CCG-----GG
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC----CCcEEEECCccc--CCC-----CC
Confidence 4457889999999999888777766547899999999999999999988775 246666555411 110 12
Q ss_pred CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc
Q 008457 453 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ 504 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~ 504 (564)
.+||+|++..++.+. .+.+.++| +|+| .++++.....
T Consensus 157 ~~fD~Ii~~~~~~~~------~~~~~~~L-~pgG--------~lvi~~~~~~ 193 (235)
T 1jg1_A 157 APYDVIIVTAGAPKI------PEPLIEQL-KIGG--------KLIIPVGSYH 193 (235)
T ss_dssp CCEEEEEECSBBSSC------CHHHHHTE-EEEE--------EEEEEECSSS
T ss_pred CCccEEEECCcHHHH------HHHHHHhc-CCCc--------EEEEEEecCC
Confidence 359999988766543 24788899 9988 8887766543
No 449
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.86 E-value=4.8e-09 Score=114.51 Aligned_cols=107 Identities=11% Similarity=0.122 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC---CCeeEEEecCCcccccCCCCCCceeEE
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE---TRVSTFVCDLISDDLSRQISPSSIDIV 150 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~---~~i~~~~~d~~~~~~~~~~~~~~fD~V 150 (564)
.++.+|||+|||+|.++..++..+ ..+|+++|+|+.+++.|+++....+ .+++++++|+.... +...++||+|
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l---~~~~~~fD~I 613 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLI 613 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHH---HHCCCCEEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHH---HhcCCCccEE
Confidence 468899999999999999988863 3479999999999999999875443 36999999986421 1235789999
Q ss_pred EEccc-----------ccCCChhHHHHHHHHHHhccCCCeEEEEEec
Q 008457 151 TMVFV-----------LSAVSPEKMSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 151 ~~~~v-----------l~~~~~~~~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
++.-- +.+ ..+...++..+.++|+|||.|+++..
T Consensus 614 i~DPP~f~~~~~~~~~~~~--~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDV--QRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp EECCCSBC-------CCBH--HHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCccccCCccchhHHHH--HHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 99542 122 25677899999999999999998653
No 450
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.86 E-value=3.5e-09 Score=103.02 Aligned_cols=140 Identities=14% Similarity=0.075 Sum_probs=89.9
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
++++|||||||+|.++..++... ..+|+++|+++.+++.+++++..++......++++...|.. +.+ ....++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~-----~~l-~~~~~~ 151 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDAS-----KFL-ENVTNT 151 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHH-----HHH-HHCCSC
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChH-----HHH-HhCCCC
Confidence 56899999999998888777654 56999999999999999998765321111245666544322 111 122568
Q ss_pred ccEEEEeceeeC---CCCh--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCCh---hHHHHHHHHcCCeEEEEcC
Q 008457 455 FEVILGTDVSYI---PEAI--LPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE---PSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 455 fD~Ii~~d~~y~---~~~~--~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~---~~~~~~~~~~g~~~~~~~~ 526 (564)
||+|++ |.... ...+ ..+++.+.++| +|+| ++++......... ..+.+.+++. |...+.+.
T Consensus 152 fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L-~pgG--------~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~ 220 (283)
T 2i7c_A 152 YDVIIV-DSSDPIGPAETLFNQNFYEKIYNAL-KPNG--------YCVAQCESLWIHVGTIKNMIGYAKKL-FKKVEYAN 220 (283)
T ss_dssp EEEEEE-ECCCTTTGGGGGSSHHHHHHHHHHE-EEEE--------EEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred ceEEEE-cCCCCCCcchhhhHHHHHHHHHHhc-CCCc--------EEEEECCCcccCHHHHHHHHHHHHHH-CCceEEEE
Confidence 999996 33221 1122 78999999999 9988 7776644332222 2445555544 66555554
Q ss_pred CCCCCC
Q 008457 527 SKNSAS 532 (564)
Q Consensus 527 ~~~~~~ 532 (564)
...|..
T Consensus 221 ~~vP~y 226 (283)
T 2i7c_A 221 ISIPTY 226 (283)
T ss_dssp EECTTS
T ss_pred EEcCCc
Confidence 444443
No 451
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.85 E-value=3e-08 Score=99.15 Aligned_cols=164 Identities=15% Similarity=0.141 Sum_probs=102.0
Q ss_pred CCeEEEEcCCccccHHHHHHh-----------------CCCcEEEEEeCC-----------hHHHHHHHhcccccCCCee
Q 008457 76 RKDVLEVGCGAGNTIFPLIAA-----------------YPDVFVYACDFS-----------PRAVNLVMTHKDFTETRVS 127 (564)
Q Consensus 76 ~~~VLDiGcG~G~~~~~l~~~-----------------~~~~~v~~iD~s-----------~~~l~~a~~~~~~~~~~i~ 127 (564)
..+|+|+||++|.++..+... .|..+|+..|+. +.+.+.+++.... ..+.-
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~-~~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR-KIGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC-CTTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC-CCCce
Confidence 689999999999999887765 356889999987 4444443332211 11234
Q ss_pred EEEecCCcccccCCCCCCceeEEEEcccccCCChh-------------------------------------HHHHHHHH
Q 008457 128 TFVCDLISDDLSRQISPSSIDIVTMVFVLSAVSPE-------------------------------------KMSLVLQN 170 (564)
Q Consensus 128 ~~~~d~~~~~~~~~~~~~~fD~V~~~~vl~~~~~~-------------------------------------~~~~~l~~ 170 (564)
|+.+.- ..-....||++++|+|+++.+|||++.. |...+|+.
T Consensus 132 f~~gvp-gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~ 210 (384)
T 2efj_A 132 LIGAMP-GSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRI 210 (384)
T ss_dssp EEEECC-SCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecc-hhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 555532 2223336789999999999999998521 12234777
Q ss_pred HHhccCCCeEEEEEecCCCch--h------hhhhcccc--cccccceeecCCCceeeccCHHHHHHHHHhC-CCcEEEee
Q 008457 171 IKKVLKPTGYVLFRDYAIGDL--A------QERLTGKD--QKISENFYVRGDGTRAFYFSNDFLTSLFKEN-GFDVEELG 239 (564)
Q Consensus 171 ~~r~LkpgG~lii~~~~~~~~--~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a-Gf~~~~~~ 239 (564)
.++.|+|||++++...+.++. . ........ ..+...-....-....|+.+.++++.++++. +|.+..+.
T Consensus 211 Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 211 HSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp HHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred HHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEE
Confidence 799999999999998776553 1 11111000 0000000000011234567999999999987 48887765
Q ss_pred ee
Q 008457 240 LC 241 (564)
Q Consensus 240 ~~ 241 (564)
..
T Consensus 291 ~~ 292 (384)
T 2efj_A 291 TF 292 (384)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 452
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.84 E-value=1.2e-08 Score=105.08 Aligned_cols=140 Identities=24% Similarity=0.243 Sum_probs=92.1
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEee
Q 008457 360 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 437 (564)
Q Consensus 360 ~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~ 437 (564)
++..++..+. ..++.+|||+|||+|+.+..++... ..+|+++|+++.+++.+++|+..++. . +.+...|
T Consensus 89 ss~l~a~~L~----~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~----~-v~~~~~D 159 (464)
T 3m6w_A 89 SAQAVGVLLD----PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA----P-LAVTQAP 159 (464)
T ss_dssp TTHHHHHHHC----CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC----C-CEEECSC
T ss_pred HHHHHHHhcC----cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----e-EEEEECC
Confidence 3455555553 2378899999999999998888753 36999999999999999999999886 2 4444322
Q ss_pred cCCCccchhhhhhcCCCccEEEEeceeeC--------CC--------C-------hHHHHHHHHHHhhccCCCCCCCCCc
Q 008457 438 WGNRDHIEAIKEENNEGFEVILGTDVSYI--------PE--------A-------ILPLFATAKELTASSNKSLREDQQP 494 (564)
Q Consensus 438 w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~--------~~--------~-------~~~l~~~~~~ll~~~~g~~~~~~~~ 494 (564)
. ..+.....++||+|++ |..+. ++ . ...+++.+.++| +|+|
T Consensus 160 a------~~l~~~~~~~FD~Il~-D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~L-kpGG-------- 223 (464)
T 3m6w_A 160 P------RALAEAFGTYFHRVLL-DAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLL-GPGG-------- 223 (464)
T ss_dssp H------HHHHHHHCSCEEEEEE-ECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTE-EEEE--------
T ss_pred H------HHhhhhccccCCEEEE-CCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhc-CCCc--------
Confidence 2 2222223578999984 33321 11 1 167888899999 9987
Q ss_pred EEEEEEe--eccCChhHHHHHHHHc-CCeEEEE
Q 008457 495 AFILCHI--FRQVDEPSMLSAATQC-GFRLVDK 524 (564)
Q Consensus 495 ~~~~~~~--~r~~~~~~~~~~~~~~-g~~~~~~ 524 (564)
.++.+.- ...+.+..+...+++. +|+++.+
T Consensus 224 ~LvysTCs~~~eEne~vv~~~l~~~~~~~l~~~ 256 (464)
T 3m6w_A 224 VLVYSTCTFAPEENEGVVAHFLKAHPEFRLEDA 256 (464)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHCTTEEEECC
T ss_pred EEEEEeccCchhcCHHHHHHHHHHCCCcEEEec
Confidence 6655433 3333443344444555 6877765
No 453
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.84 E-value=1.3e-08 Score=104.67 Aligned_cols=142 Identities=17% Similarity=0.155 Sum_probs=94.7
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhc--CCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEe
Q 008457 359 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 436 (564)
Q Consensus 359 ~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~--~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l 436 (564)
.++.+++..+. ..++.+|||+|||+|+.+..++.. ...+|+++|+++.+++.+++|+..++.. ++.+...
T Consensus 92 ~ss~l~~~~L~----~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~----nv~v~~~ 163 (456)
T 3m4x_A 92 PSAMIVGTAAA----AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS----NAIVTNH 163 (456)
T ss_dssp TTTHHHHHHHC----CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS----SEEEECC
T ss_pred HHHHHHHHHcC----CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----ceEEEeC
Confidence 34555666653 236889999999999998888765 3469999999999999999999998873 4555433
Q ss_pred ecCCCccchhhhhhcCCCccEEEEeceeeCC----------------C-------ChHHHHHHHHHHhhccCCCCCCCCC
Q 008457 437 EWGNRDHIEAIKEENNEGFEVILGTDVSYIP----------------E-------AILPLFATAKELTASSNKSLREDQQ 493 (564)
Q Consensus 437 ~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~----------------~-------~~~~l~~~~~~ll~~~~g~~~~~~~ 493 (564)
|. ..+....+++||+|++ |..+.. . ....+++.+.++| +|+|
T Consensus 164 Da------~~l~~~~~~~FD~Il~-DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~L-kpGG------- 228 (456)
T 3m4x_A 164 AP------AELVPHFSGFFDRIVV-DAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKML-KNKG------- 228 (456)
T ss_dssp CH------HHHHHHHTTCEEEEEE-ECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTE-EEEE-------
T ss_pred CH------HHhhhhccccCCEEEE-CCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhc-CCCc-------
Confidence 22 2222223578999985 333211 1 1126788889999 9987
Q ss_pred cEEEEEEe--eccCChhHHHHHHHHcCCeEEEE
Q 008457 494 PAFILCHI--FRQVDEPSMLSAATQCGFRLVDK 524 (564)
Q Consensus 494 ~~~~~~~~--~r~~~~~~~~~~~~~~g~~~~~~ 524 (564)
.++.+.- ...+.+..+...+++.+|++..+
T Consensus 229 -~LvYsTCs~~~eEne~vv~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 229 -QLIYSTCTFAPEENEEIISWLVENYPVTIEEI 260 (456)
T ss_dssp -EEEEEESCCCGGGTHHHHHHHHHHSSEEEECC
T ss_pred -EEEEEEeecccccCHHHHHHHHHhCCCEEEec
Confidence 6555433 33334444555566778777655
No 454
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.84 E-value=6.7e-09 Score=97.68 Aligned_cols=111 Identities=13% Similarity=0.094 Sum_probs=78.8
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcCC------CEEEEEcCChhHHHHHHHHHHhcCCCC-CCCceEEEEeecCCCccchh
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGSA------DLVVATDGDSIALDLLAQNVTANLKPP-FLAKLITKRLEWGNRDHIEA 446 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~~------~~v~~tD~~~~~l~~~~~n~~~n~~~~-~~~~i~~~~l~w~~~~~~~~ 446 (564)
+.++.+|||+|||+|.++..++.... .+|+++|+++.+++.+++|+..++... ...++.+...|..+. ...
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~ 155 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQV--NEE 155 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGC--CHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhc--ccc
Confidence 44788999999999988877776543 599999999999999999998876200 014567666655432 100
Q ss_pred hhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 447 IKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 447 ~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
. ....++||+|++...+.+ +++.+.++| +|+| .++++...
T Consensus 156 ~-~~~~~~fD~I~~~~~~~~------~~~~~~~~L-kpgG--------~lv~~~~~ 195 (227)
T 2pbf_A 156 E-KKELGLFDAIHVGASASE------LPEILVDLL-AENG--------KLIIPIEE 195 (227)
T ss_dssp H-HHHHCCEEEEEECSBBSS------CCHHHHHHE-EEEE--------EEEEEEEE
T ss_pred c-CccCCCcCEEEECCchHH------HHHHHHHhc-CCCc--------EEEEEEcc
Confidence 0 012358999998766543 358889999 9988 77777665
No 455
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.83 E-value=8.7e-09 Score=96.99 Aligned_cols=106 Identities=17% Similarity=0.088 Sum_probs=78.4
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...|.. +.+..+..
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~---~~i~~~~~d~~-----~~~~~~~~ 139 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE---HKIDLRLKPAL-----ETLDELLA 139 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT---TTEEEEESCHH-----HHHHHHHH
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC---CeEEEEEcCHH-----HHHHHHHh
Confidence 367899999999997777776643 569999999999999999999988763 45666654432 11112221
Q ss_pred ----CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEE
Q 008457 453 ----EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCH 500 (564)
Q Consensus 453 ----~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~ 500 (564)
++||+|++... ......+++.+.++| +|+| .+++..
T Consensus 140 ~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L-~pgG--------~lv~~~ 179 (229)
T 2avd_A 140 AGEAGTFDVAVVDAD---KENCSAYYERCLQLL-RPGG--------ILAVLR 179 (229)
T ss_dssp TTCTTCEEEEEECSC---STTHHHHHHHHHHHE-EEEE--------EEEEEC
T ss_pred cCCCCCccEEEECCC---HHHHHHHHHHHHHHc-CCCe--------EEEEEC
Confidence 68999986322 556788999999999 9988 776643
No 456
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.83 E-value=1.9e-09 Score=102.42 Aligned_cols=100 Identities=16% Similarity=0.078 Sum_probs=75.5
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhh--
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE-- 450 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~-- 450 (564)
.++++|||||||+|..+..++... ..+|+++|+++++++.+++|+..++.. +++.+...|.. +.+..+
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~---~~i~~~~gda~-----~~l~~~~~ 130 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE---HKIKLRLGPAL-----DTLHSLLN 130 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT---TTEEEEESCHH-----HHHHHHHH
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEEcCHH-----HHHHHHhh
Confidence 366799999999997777776643 469999999999999999999998874 46777654432 111111
Q ss_pred --cCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCC
Q 008457 451 --NNEGFEVILGTDVSYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 451 --~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
..++||+|+..- .......+++.+.++| +|+|
T Consensus 131 ~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~L-kpGG 164 (242)
T 3r3h_A 131 EGGEHQFDFIFIDA---DKTNYLNYYELALKLV-TPKG 164 (242)
T ss_dssp HHCSSCEEEEEEES---CGGGHHHHHHHHHHHE-EEEE
T ss_pred ccCCCCEeEEEEcC---ChHHhHHHHHHHHHhc-CCCe
Confidence 146899998542 2566788999999999 9988
No 457
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.83 E-value=3.3e-09 Score=100.72 Aligned_cols=109 Identities=11% Similarity=0.049 Sum_probs=79.3
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhh----
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIK---- 448 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~---- 448 (564)
.++.+|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++.. +++.+...|..+. ...+.
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~---~~v~~~~~d~~~~--~~~~~~~~~ 133 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE---NKIFLKLGSALET--LQVLIDSKS 133 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG---GGEEEEESCHHHH--HHHHHHCSS
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CCEEEEECCHHHH--HHHHHhhcc
Confidence 367899999999998887777664 569999999999999999999887763 3466655443210 11110
Q ss_pred ------hhc-C-CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEE
Q 008457 449 ------EEN-N-EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCH 500 (564)
Q Consensus 449 ------~~~-~-~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~ 500 (564)
.++ . ++||+|++. ........+++.+.++| +|+| .+++..
T Consensus 134 ~~~~~~~f~~~~~~fD~I~~~---~~~~~~~~~l~~~~~~L-~pgG--------~lv~~~ 181 (239)
T 2hnk_A 134 APSWASDFAFGPSSIDLFFLD---ADKENYPNYYPLILKLL-KPGG--------LLIADN 181 (239)
T ss_dssp CCGGGTTTCCSTTCEEEEEEC---SCGGGHHHHHHHHHHHE-EEEE--------EEEEEC
T ss_pred cccccccccCCCCCcCEEEEe---CCHHHHHHHHHHHHHHc-CCCe--------EEEEEc
Confidence 011 1 689999865 33556778999999999 9988 777654
No 458
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.83 E-value=8.9e-09 Score=96.75 Aligned_cols=108 Identities=14% Similarity=0.035 Sum_probs=77.6
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcC-C-CEEEEEcCChhHHHHHHHHHHhcCCCC-CCCceEEEEeecCCCccchhhhhh
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGS-A-DLVVATDGDSIALDLLAQNVTANLKPP-FLAKLITKRLEWGNRDHIEAIKEE 450 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~-~-~~v~~tD~~~~~l~~~~~n~~~n~~~~-~~~~i~~~~l~w~~~~~~~~~~~~ 450 (564)
..++.+|||+|||+|.++..++... . .+|+++|+++.+++.+++|+..++... ...++.+...|.... ..
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-------~~ 147 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-------YA 147 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-------CG
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC-------cc
Confidence 4478899999999998887777653 3 599999999999999999998765300 013566666655321 11
Q ss_pred cCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 008457 451 NNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 451 ~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
..++||+|++..++. .+++.+.++| +|+| .++++....
T Consensus 148 ~~~~fD~i~~~~~~~------~~~~~~~~~L-kpgG--------~lv~~~~~~ 185 (226)
T 1i1n_A 148 EEAPYDAIHVGAAAP------VVPQALIDQL-KPGG--------RLILPVGPA 185 (226)
T ss_dssp GGCCEEEEEECSBBS------SCCHHHHHTE-EEEE--------EEEEEESCT
T ss_pred cCCCcCEEEECCchH------HHHHHHHHhc-CCCc--------EEEEEEecC
Confidence 245899998776553 2357888999 9988 777776543
No 459
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.83 E-value=5.5e-09 Score=96.98 Aligned_cols=97 Identities=11% Similarity=0.000 Sum_probs=73.5
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++|+..++.. +++.+...|..+ .+ +..++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~-----~~-~~~~~ 126 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI---DRVELQVGDPLG-----IA-AGQRD 126 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG---GGEEEEESCHHH-----HH-TTCCS
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC---ceEEEEEecHHH-----Hh-ccCCC
Confidence 56799999999997777776653 469999999999999999999887753 456666544321 11 11235
Q ss_pred CccEEEEeceeeCCCChHHHHHHHHHHhhccCC
Q 008457 454 GFEVILGTDVSYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
||+|++. ........+++.+.++| +|+|
T Consensus 127 -fD~v~~~---~~~~~~~~~l~~~~~~L-kpgG 154 (210)
T 3c3p_A 127 -IDILFMD---CDVFNGADVLERMNRCL-AKNA 154 (210)
T ss_dssp -EEEEEEE---TTTSCHHHHHHHHGGGE-EEEE
T ss_pred -CCEEEEc---CChhhhHHHHHHHHHhc-CCCe
Confidence 9999864 34567899999999999 9988
No 460
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.82 E-value=5.8e-09 Score=107.87 Aligned_cols=113 Identities=16% Similarity=0.170 Sum_probs=83.3
Q ss_pred chhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhC-CCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCccccc
Q 008457 61 HYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLS 139 (564)
Q Consensus 61 ~~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~ 139 (564)
..+...+.+.+...++.+|||+|||+|.++..++++. ++.+++|+|+++.+++.| .++.+.++|+....
T Consensus 25 ~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~~~~~~~~D~~~~~-- 94 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------PWAEGILADFLLWE-- 94 (421)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------TTEEEEESCGGGCC--
T ss_pred HHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------CCCcEEeCChhhcC--
Confidence 3444555565654567799999999999999999874 568999999999988766 46788899986431
Q ss_pred CCCCCCceeEEEEccccc----------CCChhH-----------------HHHHHHHHHhccCCCeEEEEEec
Q 008457 140 RQISPSSIDIVTMVFVLS----------AVSPEK-----------------MSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 140 ~~~~~~~fD~V~~~~vl~----------~~~~~~-----------------~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
+.++||+|+++--+. |++.+. ...+++.+.++|+|||.+++..+
T Consensus 95 ---~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 95 ---PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp ---CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 357899999962221 132221 12679999999999999988754
No 461
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.81 E-value=9.1e-09 Score=99.92 Aligned_cols=89 Identities=16% Similarity=0.088 Sum_probs=72.2
Q ss_pred hhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCC
Q 008457 62 YLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQ 141 (564)
Q Consensus 62 ~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~ 141 (564)
.+...+.+.+...++.+|||||||+|.++..|++. +.+|+++|+++.+++.++++.. ...+++++++|+....+
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~-~~~~v~vi~gD~l~~~~--- 110 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKVDL--- 110 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHH-HCSSEEEEESCTTTSCG---
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhc-cCCCeEEEECchhhCCc---
Confidence 34455556666678899999999999999999998 6899999999999999998875 34689999999976443
Q ss_pred CCCCceeEEEEccccc
Q 008457 142 ISPSSIDIVTMVFVLS 157 (564)
Q Consensus 142 ~~~~~fD~V~~~~vl~ 157 (564)
++.+||+|+++...+
T Consensus 111 -~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 111 -NKLDFNKVVANLPYQ 125 (295)
T ss_dssp -GGSCCSEEEEECCGG
T ss_pred -ccCCccEEEEeCccc
Confidence 456799999875544
No 462
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.80 E-value=2.9e-08 Score=91.31 Aligned_cols=140 Identities=13% Similarity=0.187 Sum_probs=85.7
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC---CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEe
Q 008457 360 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS---ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 436 (564)
Q Consensus 360 ~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~---~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l 436 (564)
++..|.+.+.....+.++.+|||||||+|.++..++... ..+|+++|+++.+ . ..++.+...
T Consensus 6 ~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~----~~~v~~~~~ 70 (201)
T 2plw_A 6 AAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P----IPNVYFIQG 70 (201)
T ss_dssp THHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C----CTTCEEEEC
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C----CCCceEEEc
Confidence 455666655554434577899999999999888888764 3699999998831 1 134556655
Q ss_pred ecCCCc-----------------cchhhh-hhcCCCccEEEEeceeeCC----CCh-------HHHHHHHHHHhhccCCC
Q 008457 437 EWGNRD-----------------HIEAIK-EENNEGFEVILGTDVSYIP----EAI-------LPLFATAKELTASSNKS 487 (564)
Q Consensus 437 ~w~~~~-----------------~~~~~~-~~~~~~fD~Ii~~d~~y~~----~~~-------~~l~~~~~~ll~~~~g~ 487 (564)
|+.+.. ....+. .+...+||+|++.-.+... .+. ..+++.+.++| +|+|
T Consensus 71 d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~L-kpgG- 148 (201)
T 2plw_A 71 EIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYI-NIGG- 148 (201)
T ss_dssp CTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHE-EEEE-
T ss_pred cccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHc-cCCC-
Confidence 654432 000111 1355789999975433321 111 23788899999 9988
Q ss_pred CCCCCCcEEEEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 488 LREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 488 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
.+++.... ......+...+.. .|...++.
T Consensus 149 -------~lv~~~~~-~~~~~~l~~~l~~-~f~~v~~~ 177 (201)
T 2plw_A 149 -------TYIVKMYL-GSQTNNLKTYLKG-MFQLVHTT 177 (201)
T ss_dssp -------EEEEEEEC-STTHHHHHHHHHT-TEEEEEEC
T ss_pred -------EEEEEEeC-CCCHHHHHHHHHH-HHheEEEE
Confidence 77664432 2333455665544 56655554
No 463
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.80 E-value=2.4e-08 Score=96.98 Aligned_cols=137 Identities=18% Similarity=0.105 Sum_probs=87.0
Q ss_pred CCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCC-------CCCceEEEEeecCCCccchhhh
Q 008457 376 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPP-------FLAKLITKRLEWGNRDHIEAIK 448 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~-------~~~~i~~~~l~w~~~~~~~~~~ 448 (564)
.+++|||||||+|.++..++..+..+|+++|+++.+++.+++|+ ...... ...++++..-|. .+.+.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~-----~~~l~ 148 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDG-----FEFIK 148 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCH-----HHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECch-----HHHhc
Confidence 56899999999998888887775569999999999999999998 321010 124566654332 11122
Q ss_pred hhcCCCccEEEEeceeeCC---CC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCCh---hHHHHHHHHcCCe
Q 008457 449 EENNEGFEVILGTDVSYIP---EA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE---PSMLSAATQCGFR 520 (564)
Q Consensus 449 ~~~~~~fD~Ii~~d~~y~~---~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~---~~~~~~~~~~g~~ 520 (564)
. .++||+|++ |..... .. ...+++.+.++| +|+| ++++......... ..+.+.+.+. |.
T Consensus 149 ~--~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L-~pgG--------~lv~~~~~~~~~~~~~~~~~~~l~~~-f~ 215 (281)
T 1mjf_A 149 N--NRGFDVIIA-DSTDPVGPAKVLFSEEFYRYVYDAL-NNPG--------IYVTQAGSVYLFTDELISAYKEMKKV-FD 215 (281)
T ss_dssp H--CCCEEEEEE-ECCCCC-----TTSHHHHHHHHHHE-EEEE--------EEEEEEEETTTSHHHHHHHHHHHHHH-CS
T ss_pred c--cCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhc-CCCc--------EEEEEcCCcccCHHHHHHHHHHHHHH-CC
Confidence 2 568999995 544321 11 377899999999 9988 7766544321122 3445555544 55
Q ss_pred EEEEcCCCCCC
Q 008457 521 LVDKWPSKNSA 531 (564)
Q Consensus 521 ~~~~~~~~~~~ 531 (564)
....+....|.
T Consensus 216 ~v~~~~~~vP~ 226 (281)
T 1mjf_A 216 RVYYYSFPVIG 226 (281)
T ss_dssp EEEEEEECCTT
T ss_pred ceEEEEEecCC
Confidence 55554433333
No 464
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.80 E-value=1.1e-07 Score=97.56 Aligned_cols=114 Identities=16% Similarity=0.145 Sum_probs=82.3
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecC
Q 008457 360 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWG 439 (564)
Q Consensus 360 ~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~ 439 (564)
.+..|.+++.. ..++.+|||||||+|.++..++.. +.+|+++|+++.+++.+++|+..|++ . +.+...|..
T Consensus 277 ~~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl----~-v~~~~~d~~ 347 (425)
T 2jjq_A 277 QAVNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNV----D-AEFEVASDR 347 (425)
T ss_dssp HHHHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC----C-EEEEECCTT
T ss_pred HHHHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCC----c-EEEEECChH
Confidence 44556666655 447789999999999888777664 66999999999999999999999886 3 666665554
Q ss_pred CCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 008457 440 NRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 440 ~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
+. ...+||+|++ |..+. ...+.+++.+.. | +|+| .+|++....
T Consensus 348 ~~---------~~~~fD~Vv~-dPPr~-g~~~~~~~~l~~-l-~p~g--------ivyvsc~p~ 390 (425)
T 2jjq_A 348 EV---------SVKGFDTVIV-DPPRA-GLHPRLVKRLNR-E-KPGV--------IVYVSCNPE 390 (425)
T ss_dssp TC---------CCTTCSEEEE-CCCTT-CSCHHHHHHHHH-H-CCSE--------EEEEESCHH
T ss_pred Hc---------CccCCCEEEE-cCCcc-chHHHHHHHHHh-c-CCCc--------EEEEECChH
Confidence 32 1127999986 44432 234557777764 7 8876 888875443
No 465
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.79 E-value=1.8e-08 Score=101.68 Aligned_cols=106 Identities=16% Similarity=0.123 Sum_probs=78.6
Q ss_pred CCCeEEEeCCcccHHHHHHHhc--CCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCc-eEEEEeecCCCccchhhhhhcC
Q 008457 376 AGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFLAK-LITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~--~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~-i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
++.+|||++||+|++++.++.. ++.+|+++|+++.+++.+++|++.|++. ++ +.+...| ..+.+.....
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~---~~~v~v~~~D-----a~~~l~~~~~ 123 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP---EDRYEIHGME-----ANFFLRKEWG 123 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC---GGGEEEECSC-----HHHHHHSCCS
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC---CceEEEEeCC-----HHHHHHHhhC
Confidence 5789999999999999988875 4479999999999999999999999974 33 5554332 2222210124
Q ss_pred CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 453 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
.+||+|+ .|. | .....+++.+.++| +++| .++++...
T Consensus 124 ~~fD~V~-lDP-~--g~~~~~l~~a~~~L-k~gG--------ll~~t~t~ 160 (392)
T 3axs_A 124 FGFDYVD-LDP-F--GTPVPFIESVALSM-KRGG--------ILSLTATD 160 (392)
T ss_dssp SCEEEEE-ECC-S--SCCHHHHHHHHHHE-EEEE--------EEEEEECC
T ss_pred CCCcEEE-ECC-C--cCHHHHHHHHHHHh-CCCC--------EEEEEecc
Confidence 5899998 565 4 33467899999999 9877 77777643
No 466
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.79 E-value=1.1e-08 Score=96.75 Aligned_cols=99 Identities=13% Similarity=0.020 Sum_probs=74.8
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhh---
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE--- 450 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~--- 450 (564)
++++|||||||+|..+..++... ..+|+++|+++++++.+++|+..++.. +++.+...|.. +.+..+
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~---~~i~~~~gda~-----~~l~~l~~~ 141 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE---HKINFIESDAM-----LALDNLLQG 141 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG---GGEEEEESCHH-----HHHHHHHHS
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEEcCHH-----HHHHHHHhc
Confidence 56799999999997777776642 569999999999999999999987763 45776654432 111122
Q ss_pred --cCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCC
Q 008457 451 --NNEGFEVILGTDVSYIPEAILPLFATAKELTASSNK 486 (564)
Q Consensus 451 --~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g 486 (564)
..++||+|+.. ........+++.+.++| +|+|
T Consensus 142 ~~~~~~fD~I~~d---~~~~~~~~~l~~~~~~L-~pGG 175 (237)
T 3c3y_A 142 QESEGSYDFGFVD---ADKPNYIKYHERLMKLV-KVGG 175 (237)
T ss_dssp TTCTTCEEEEEEC---SCGGGHHHHHHHHHHHE-EEEE
T ss_pred cCCCCCcCEEEEC---CchHHHHHHHHHHHHhc-CCCe
Confidence 14689999853 23456789999999999 9988
No 467
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.79 E-value=1.6e-08 Score=103.73 Aligned_cols=99 Identities=14% Similarity=0.084 Sum_probs=75.8
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCCCCCceeEEEEc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTMV 153 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (564)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+..++|+++|+... ...+||+|++.
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~------~~~~fD~Vv~d 360 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREV------SVKGFDTVIVD 360 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTC------CCTTCSEEEEC
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHc------CccCCCEEEEc
Confidence 57889999999999999999987 67999999999999999988754443389999998653 12289999995
Q ss_pred ccccCCChhHHHHHHHHHHhccCCCeEEEEEe
Q 008457 154 FVLSAVSPEKMSLVLQNIKKVLKPTGYVLFRD 185 (564)
Q Consensus 154 ~vl~~~~~~~~~~~l~~~~r~LkpgG~lii~~ 185 (564)
-.-.... ..+++.+. .|+|||.++++.
T Consensus 361 PPr~g~~----~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 361 PPRAGLH----PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCTTCSC----HHHHHHHH-HHCCSEEEEEES
T ss_pred CCccchH----HHHHHHHH-hcCCCcEEEEEC
Confidence 4322221 23455554 489999999863
No 468
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.79 E-value=7.7e-10 Score=105.46 Aligned_cols=113 Identities=15% Similarity=0.119 Sum_probs=80.6
Q ss_pred hHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCC
Q 008457 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 63 ~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 142 (564)
+...+.+.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ...+++++++|+.... +
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~--~~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~----~ 89 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI--SKQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQFQ----F 89 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH--SSEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTTT----C
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhcC----c
Confidence 3345555666678899999999999999999998 5899999999999999887765 2457899999986543 3
Q ss_pred C-CCceeEEEEcccccCCChhHHHH----------HH----HHHHhccCCCeEEEEE
Q 008457 143 S-PSSIDIVTMVFVLSAVSPEKMSL----------VL----QNIKKVLKPTGYVLFR 184 (564)
Q Consensus 143 ~-~~~fD~V~~~~vl~~~~~~~~~~----------~l----~~~~r~LkpgG~lii~ 184 (564)
+ +++| .|+++--.+ .+...... ++ +.+.|+|+|||.+.+.
T Consensus 90 ~~~~~f-~vv~n~Py~-~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 90 PNKQRY-KIVGNIPYH-LSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp CCSSEE-EEEEECCSS-SCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred ccCCCc-EEEEeCCcc-ccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 4 3678 666653322 21122222 22 5578888888887663
No 469
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.79 E-value=2.9e-08 Score=94.29 Aligned_cols=72 Identities=13% Similarity=0.113 Sum_probs=59.6
Q ss_pred hhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcc
Q 008457 62 YLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISD 136 (564)
Q Consensus 62 ~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~ 136 (564)
.+...+.+.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++... ..+++++++|+...
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~-~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR--CNFVTAIEIDHKLCKTTENKLVD-HDNFQVLNKDILQF 88 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHTTT-CCSEEEECCCGGGC
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc--CCeEEEEECCHHHHHHHHHhhcc-CCCeEEEEChHHhC
Confidence 34455556666678899999999999999999998 57999999999999999988653 35799999998654
No 470
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.78 E-value=1.1e-08 Score=106.38 Aligned_cols=121 Identities=15% Similarity=0.139 Sum_probs=89.9
Q ss_pred chhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhC-------------CCcEEEEEeCChHHHHHHHhcccccCC---
Q 008457 61 HYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAY-------------PDVFVYACDFSPRAVNLVMTHKDFTET--- 124 (564)
Q Consensus 61 ~~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-------------~~~~v~~iD~s~~~l~~a~~~~~~~~~--- 124 (564)
..+...+.+.+.+.++.+|||.|||+|.++..+++.. +..+++|+|+++.++..|+.+....+.
T Consensus 157 ~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~ 236 (445)
T 2okc_A 157 RPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTD 236 (445)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcC
Confidence 3455566666776788899999999999998887642 246799999999999999876543332
Q ss_pred CeeEEEecCCcccccCCCCCCceeEEEEcccccCCCh---------------hHHHHHHHHHHhccCCCeEEEEEec
Q 008457 125 RVSTFVCDLISDDLSRQISPSSIDIVTMVFVLSAVSP---------------EKMSLVLQNIKKVLKPTGYVLFRDY 186 (564)
Q Consensus 125 ~i~~~~~d~~~~~~~~~~~~~~fD~V~~~~vl~~~~~---------------~~~~~~l~~~~r~LkpgG~lii~~~ 186 (564)
++.+.++|..... ...+||+|+++-.+.+... .....+++++.+.|||||++.+..+
T Consensus 237 ~~~i~~gD~l~~~-----~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 237 RSPIVCEDSLEKE-----PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCSEEECCTTTSC-----CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEeeCCCCCCc-----ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 6788899876432 2348999999866554321 1124789999999999999988653
No 471
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.78 E-value=2.8e-08 Score=90.98 Aligned_cols=140 Identities=16% Similarity=0.121 Sum_probs=83.4
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC-C---------CEEEEEcCChhHHHHHHHHHHhcCCCCCCC
Q 008457 360 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS-A---------DLVVATDGDSIALDLLAQNVTANLKPPFLA 429 (564)
Q Consensus 360 ~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~-~---------~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~ 429 (564)
++..|.+.......+.++.+|||||||+|.++..++... . .+|+++|+++.. .. .
T Consensus 6 ~~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~----~ 70 (196)
T 2nyu_A 6 SAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL----E 70 (196)
T ss_dssp HHHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC----T
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC----C
Confidence 344555555444445578899999999998888887763 3 789999999831 11 2
Q ss_pred ceEEE-EeecCCCccchhhh-hhcCCCccEEEEeceeeCCC----Ch-------HHHHHHHHHHhhccCCCCCCCCCcEE
Q 008457 430 KLITK-RLEWGNRDHIEAIK-EENNEGFEVILGTDVSYIPE----AI-------LPLFATAKELTASSNKSLREDQQPAF 496 (564)
Q Consensus 430 ~i~~~-~l~w~~~~~~~~~~-~~~~~~fD~Ii~~d~~y~~~----~~-------~~l~~~~~~ll~~~~g~~~~~~~~~~ 496 (564)
.+.+. ..|+.+......+. .+.+.+||+|++.-.+.... +. ..+++.+.++| +|+| .+
T Consensus 71 ~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG--------~l 141 (196)
T 2nyu_A 71 GATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDIL-QPGG--------TF 141 (196)
T ss_dssp TCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHE-EEEE--------EE
T ss_pred CCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHh-cCCC--------EE
Confidence 34444 44443221111111 12345899999753322211 11 47899999999 9988 77
Q ss_pred EEEEeeccCChhHHHHHHHHcCCeEEEEc
Q 008457 497 ILCHIFRQVDEPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 497 ~~~~~~r~~~~~~~~~~~~~~g~~~~~~~ 525 (564)
++..... .....+...+... |...++.
T Consensus 142 v~~~~~~-~~~~~~~~~l~~~-f~~v~~~ 168 (196)
T 2nyu_A 142 LCKTWAG-SQSRRLQRRLTEE-FQNVRII 168 (196)
T ss_dssp EEEECCS-GGGHHHHHHHHHH-EEEEEEE
T ss_pred EEEecCC-ccHHHHHHHHHHH-hcceEEE
Confidence 7764433 2234566666553 5544454
No 472
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.78 E-value=1.8e-08 Score=95.86 Aligned_cols=87 Identities=11% Similarity=0.105 Sum_probs=68.7
Q ss_pred hHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCC
Q 008457 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 63 ~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 142 (564)
+...+.+.+...++.+|||||||+|.++..|++. +.+|+++|+++.|++.++++... ..+++++++|+....+..-+
T Consensus 17 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~~~~~~~~ 93 (255)
T 3tqs_A 17 VLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQFDFSSVK 93 (255)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTTCCGGGSC
T ss_pred HHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHhCCHHHhc
Confidence 4455566666678999999999999999999988 57999999999999999988754 46899999999776553222
Q ss_pred CCCceeEEEEc
Q 008457 143 SPSSIDIVTMV 153 (564)
Q Consensus 143 ~~~~fD~V~~~ 153 (564)
..++|| |+++
T Consensus 94 ~~~~~~-vv~N 103 (255)
T 3tqs_A 94 TDKPLR-VVGN 103 (255)
T ss_dssp CSSCEE-EEEE
T ss_pred cCCCeE-EEec
Confidence 245788 5554
No 473
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.78 E-value=1.4e-08 Score=99.38 Aligned_cols=132 Identities=14% Similarity=0.092 Sum_probs=86.2
Q ss_pred CCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHHHHHHHh--cCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 376 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTA--NLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~~~n~~~--n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.+.+|||||||+|.++..++.. +..+|+++|+++.+++.+++|+.. ++.. ..++++..-|..+ .+ +...
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~--~~~v~~~~~D~~~-----~l-~~~~ 161 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFD--DPRAEIVIANGAE-----YV-RKFK 161 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGG--CTTEEEEESCHHH-----HG-GGCS
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccC--CCceEEEECcHHH-----HH-hhCC
Confidence 4579999999999888888776 457999999999999999999754 2221 2456666544321 11 1234
Q ss_pred CCccEEEEeceeeC-CC-----ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCC---hhHHHHHHHHcCCeEEE
Q 008457 453 EGFEVILGTDVSYI-PE-----AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD---EPSMLSAATQCGFRLVD 523 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~-~~-----~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~---~~~~~~~~~~~g~~~~~ 523 (564)
++||+|++ |+... .. ....+++.+.++| +|+| ++++........ .....+.+.+. |....
T Consensus 162 ~~fD~Ii~-d~~~~~~~~~~~l~~~~~l~~~~~~L-kpgG--------~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~ 230 (296)
T 1inl_A 162 NEFDVIII-DSTDPTAGQGGHLFTEEFYQACYDAL-KEDG--------VFSAETEDPFYDIGWFKLAYRRISKV-FPITR 230 (296)
T ss_dssp SCEEEEEE-EC----------CCSHHHHHHHHHHE-EEEE--------EEEEECCCTTTTHHHHHHHHHHHHHH-CSEEE
T ss_pred CCceEEEE-cCCCcccCchhhhhHHHHHHHHHHhc-CCCc--------EEEEEccCcccCHHHHHHHHHHHHHH-CCceE
Confidence 68999995 43322 11 2378899999999 9988 777754332122 23456666666 44444
Q ss_pred EcC
Q 008457 524 KWP 526 (564)
Q Consensus 524 ~~~ 526 (564)
.+.
T Consensus 231 ~~~ 233 (296)
T 1inl_A 231 VYL 233 (296)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 474
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.77 E-value=1.1e-08 Score=96.42 Aligned_cols=105 Identities=14% Similarity=0.102 Sum_probs=77.3
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhc--
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN-- 451 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~-- 451 (564)
++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...+.. +.+..++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~---~~i~~~~~d~~-----~~l~~l~~~ 143 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA---EKISLRLGPAL-----ATLEQLTQG 143 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG---GGEEEEESCHH-----HHHHHHHTS
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEEcCHH-----HHHHHHHhc
Confidence 56799999999997777776653 459999999999999999999887763 45666544332 1122222
Q ss_pred C--CCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEE
Q 008457 452 N--EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCH 500 (564)
Q Consensus 452 ~--~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~ 500 (564)
+ ++||+|++... ......+++.+.++| +|+| .+++..
T Consensus 144 ~~~~~fD~V~~d~~---~~~~~~~l~~~~~~L-kpgG--------~lv~~~ 182 (232)
T 3cbg_A 144 KPLPEFDLIFIDAD---KRNYPRYYEIGLNLL-RRGG--------LMVIDN 182 (232)
T ss_dssp SSCCCEEEEEECSC---GGGHHHHHHHHHHTE-EEEE--------EEEEEC
T ss_pred CCCCCcCEEEECCC---HHHHHHHHHHHHHHc-CCCe--------EEEEeC
Confidence 2 68999985422 456788999999999 9988 776643
No 475
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.76 E-value=6.6e-08 Score=94.32 Aligned_cols=129 Identities=12% Similarity=0.047 Sum_probs=85.3
Q ss_pred CCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCc
Q 008457 377 GKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 455 (564)
Q Consensus 377 ~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~f 455 (564)
..+|||||||+|.++..++.. ...+|+++|+++.+++.+++++..+. ..++++..-|. .+.+.....++|
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~----~~rv~v~~~Da-----~~~l~~~~~~~f 160 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR----APRVKIRVDDA-----RMVAESFTPASR 160 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC----TTTEEEEESCH-----HHHHHTCCTTCE
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC----CCceEEEECcH-----HHHHhhccCCCC
Confidence 349999999999888888874 45599999999999999999976532 24566654432 222222345789
Q ss_pred cEEEEeceeeC---CC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCC--hhHHHHHHHHcCCeEEEEc
Q 008457 456 EVILGTDVSYI---PE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD--EPSMLSAATQCGFRLVDKW 525 (564)
Q Consensus 456 D~Ii~~d~~y~---~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~~g~~~~~~~ 525 (564)
|+|++ |+... .. ....+++.++++| +|+| ++++........ ...+...+++. |....++
T Consensus 161 DvIi~-D~~~~~~~~~~L~t~efl~~~~r~L-kpgG--------vlv~~~~~~~~~~~~~~~~~tL~~v-F~~v~~~ 226 (317)
T 3gjy_A 161 DVIIR-DVFAGAITPQNFTTVEFFEHCHRGL-APGG--------LYVANCGDHSDLRGAKSELAGMMEV-FEHVAVI 226 (317)
T ss_dssp EEEEE-CCSTTSCCCGGGSBHHHHHHHHHHE-EEEE--------EEEEEEEECTTCHHHHHHHHHHHHH-CSEEEEE
T ss_pred CEEEE-CCCCccccchhhhHHHHHHHHHHhc-CCCc--------EEEEEecCCcchHHHHHHHHHHHHH-CCceEEE
Confidence 99985 43221 11 1278999999999 9988 666665533221 13456666654 3333343
No 476
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.75 E-value=3.2e-08 Score=91.29 Aligned_cols=105 Identities=10% Similarity=0.012 Sum_probs=73.9
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
....+|||||||+|.++.... ...+|+++|+|+.+++.++.|+..++. ...+...|.... .++++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~-----~~~~~v~D~~~~--------~~~~~ 168 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW-----DFTFALQDVLCA--------PPAEA 168 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC-----EEEEEECCTTTS--------CCCCB
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC-----CceEEEeecccC--------CCCCC
Confidence 357799999999997776665 677999999999999999999998874 345555544332 24569
Q ss_pred ccEEEEeceeeCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccC
Q 008457 455 FEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQV 505 (564)
Q Consensus 455 fD~Ii~~d~~y~~--~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~ 505 (564)
||+|++..++.+- .....+. .+-+.| ++. .++++++.|..
T Consensus 169 ~DvvLllk~lh~LE~q~~~~~~-~ll~aL-~~~---------~vvVsfPtksl 210 (253)
T 3frh_A 169 GDLALIFKLLPLLEREQAGSAM-ALLQSL-NTP---------RMAVSFPTRSL 210 (253)
T ss_dssp CSEEEEESCHHHHHHHSTTHHH-HHHHHC-BCS---------EEEEEEECC--
T ss_pred cchHHHHHHHHHhhhhchhhHH-HHHHHh-cCC---------CEEEEcChHHh
Confidence 9999999776652 2233444 444466 443 68888886543
No 477
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.74 E-value=3.5e-08 Score=102.48 Aligned_cols=144 Identities=17% Similarity=0.133 Sum_probs=94.3
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC-C-CEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEe
Q 008457 359 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS-A-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 436 (564)
Q Consensus 359 ~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~-~-~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l 436 (564)
.++..++..+. ..++.+|||+|||+|+.+..++... . .+|+++|+++.+++.+++|+..++. .++.+...
T Consensus 246 ~~s~l~~~~l~----~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~----~~v~~~~~ 317 (450)
T 2yxl_A 246 EASAVASIVLD----PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI----KIVKPLVK 317 (450)
T ss_dssp HHHHHHHHHHC----CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC----CSEEEECS
T ss_pred chhHHHHHhcC----CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC----CcEEEEEc
Confidence 34455555552 3367899999999999888887753 2 6999999999999999999998876 34666655
Q ss_pred ecCCCccchhhhhhcCCCccEEEEeceee-------CC---------CCh-------HHHHHHHHHHhhccCCCCCCCCC
Q 008457 437 EWGNRDHIEAIKEENNEGFEVILGTDVSY-------IP---------EAI-------LPLFATAKELTASSNKSLREDQQ 493 (564)
Q Consensus 437 ~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y-------~~---------~~~-------~~l~~~~~~ll~~~~g~~~~~~~ 493 (564)
|..+... .+.+++||+|++ |+.+ .. ..+ ..+++.+.++| +|+|
T Consensus 318 D~~~~~~-----~~~~~~fD~Vl~-D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L-kpGG------- 383 (450)
T 2yxl_A 318 DARKAPE-----IIGEEVADKVLL-DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLV-KPGG------- 383 (450)
T ss_dssp CTTCCSS-----SSCSSCEEEEEE-ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTE-EEEE-------
T ss_pred Chhhcch-----hhccCCCCEEEE-cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhc-CCCc-------
Confidence 5443210 123368999984 2222 11 112 57889999999 9987
Q ss_pred cEEEEEEee--ccCChhHHHHHHHHc-CCeEEEEc
Q 008457 494 PAFILCHIF--RQVDEPSMLSAATQC-GFRLVDKW 525 (564)
Q Consensus 494 ~~~~~~~~~--r~~~~~~~~~~~~~~-g~~~~~~~ 525 (564)
.++++... ....+..+...+.+. ||+.+.+.
T Consensus 384 -~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~~~ 417 (450)
T 2yxl_A 384 -RLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLK 417 (450)
T ss_dssp -EEEEEESCCCGGGTHHHHHHHHHHCSSCEECCCC
T ss_pred -EEEEEeCCCChhhHHHHHHHHHHhCCCCEEeecc
Confidence 66554332 223333344445555 78776543
No 478
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.74 E-value=4.3e-08 Score=94.77 Aligned_cols=113 Identities=10% Similarity=0.081 Sum_probs=82.3
Q ss_pred CCCeEEEeCCcc---cHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccc---hhh-
Q 008457 376 AGKKVLELGCGC---GGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI---EAI- 447 (564)
Q Consensus 376 ~~~~vLelG~G~---G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~---~~~- 447 (564)
...+|||||||+ |.+...+.... ..+|+++|+|+.|++.+++++..+ .++.+...|..+.... ..+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~------~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD------PNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC------TTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC------CCeEEEEeeCCCchhhhccchhh
Confidence 347999999999 96655554443 469999999999999999987431 4577777666542111 000
Q ss_pred hhhcCCCccEEEEeceeeCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 008457 448 KEENNEGFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 448 ~~~~~~~fD~Ii~~d~~y~~~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
..+...+||+|+++.++++..+ ...+++.+.++| +|+| .++++....
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L-~pGG--------~l~i~~~~~ 199 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDAL-APGS--------YLFMTSLVD 199 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHS-CTTC--------EEEEEEEBC
T ss_pred ccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhC-CCCc--------EEEEEEecC
Confidence 1123358999999999887655 899999999999 9988 787776654
No 479
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.74 E-value=2e-08 Score=94.39 Aligned_cols=106 Identities=11% Similarity=0.045 Sum_probs=75.7
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcCC-------CEEEEEcCChhHHHHHHHHHHhcCCC-CCCCceEEEEeecCCCccch
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGSA-------DLVVATDGDSIALDLLAQNVTANLKP-PFLAKLITKRLEWGNRDHIE 445 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~~-------~~v~~tD~~~~~l~~~~~n~~~n~~~-~~~~~i~~~~l~w~~~~~~~ 445 (564)
+.++.+|||+|||+|.++..++.... .+|+++|+++.+++.+++|+..++.. ....++.+...|..+.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---- 157 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG---- 157 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC----
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC----
Confidence 44778999999999988877776432 59999999999999999998875410 0003466665554321
Q ss_pred hhhhhc-CCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 008457 446 AIKEEN-NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 502 (564)
Q Consensus 446 ~~~~~~-~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~ 502 (564)
++ .++||+|++...+.+ +.+.+.++| +|+| .++++...
T Consensus 158 ----~~~~~~fD~I~~~~~~~~------~~~~~~~~L-kpgG--------~lvi~~~~ 196 (227)
T 1r18_A 158 ----YPPNAPYNAIHVGAAAPD------TPTELINQL-ASGG--------RLIVPVGP 196 (227)
T ss_dssp ----CGGGCSEEEEEECSCBSS------CCHHHHHTE-EEEE--------EEEEEESC
T ss_pred ----CCcCCCccEEEECCchHH------HHHHHHHHh-cCCC--------EEEEEEec
Confidence 12 258999998776654 237889999 9988 77777654
No 480
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.74 E-value=3.5e-08 Score=99.35 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=90.7
Q ss_pred CCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 375 VAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 375 ~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
.+..+|||+|||+|.++..++... ..+++++|+ +.+++.+++. ..+.+...|..+. ++
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~--------~p-- 245 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFTS--------IP-- 245 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTTC--------CC--
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccCC--------CC--
Confidence 356799999999998888877764 458999999 9888766541 2367766665321 12
Q ss_pred CccEEEEeceeeCCCChH--HHHHHHHHHhhcc---CCCCCCCCCcEEEEEEeecc------------------------
Q 008457 454 GFEVILGTDVSYIPEAIL--PLFATAKELTASS---NKSLREDQQPAFILCHIFRQ------------------------ 504 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~~~~~--~l~~~~~~ll~~~---~g~~~~~~~~~~~~~~~~r~------------------------ 504 (564)
.||+|++..++++..+.. .+++.+.++| +| +| .+++......
T Consensus 246 ~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L-~p~~~gG--------~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g 316 (352)
T 1fp2_A 246 NADAVLLKYILHNWTDKDCLRILKKCKEAV-TNDGKRG--------KVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNG 316 (352)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-SGGGCCC--------EEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTC
T ss_pred CccEEEeehhhccCCHHHHHHHHHHHHHhC-CCCCCCc--------EEEEEEeecCCCCCccchhhhHhhccHHHHhccC
Confidence 499999999999887776 9999999999 99 77 7766643321
Q ss_pred --CChhHHHHHHHHcCCeEEEEcC
Q 008457 505 --VDEPSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 505 --~~~~~~~~~~~~~g~~~~~~~~ 526 (564)
.+..++.+.++++||++.++..
T Consensus 317 ~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 317 KERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp CCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCHHHHHHHHHHCCCCeeEEEe
Confidence 1124566778889999988874
No 481
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.73 E-value=8.7e-08 Score=96.95 Aligned_cols=124 Identities=14% Similarity=0.092 Sum_probs=90.8
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
.....+|||+|||+|.++..++... ..+++++|+ +.+++.++++ .++.+...|..+. ++.
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~--------~p~ 261 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF----------SGVEHLGGDMFDG--------VPK 261 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC--------CCC
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc----------CCCEEEecCCCCC--------CCC
Confidence 5567899999999998888887765 458999999 8888765431 4577777766431 232
Q ss_pred CCccEEEEeceeeCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec---------------------------
Q 008457 453 EGFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFR--------------------------- 503 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r--------------------------- 503 (564)
. |+|++..++++..+ ...+++.+.++| +|+| .+++.....
T Consensus 262 -~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g 330 (368)
T 3reo_A 262 -G-DAIFIKWICHDWSDEHCLKLLKNCYAAL-PDHG--------KVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGG 330 (368)
T ss_dssp -C-SEEEEESCGGGBCHHHHHHHHHHHHHHS-CTTC--------EEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBC
T ss_pred -C-CEEEEechhhcCCHHHHHHHHHHHHHHc-CCCC--------EEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCC
Confidence 3 99999999987654 458899999999 9988 666654321
Q ss_pred -cCChhHHHHHHHHcCCeEEEEcCC
Q 008457 504 -QVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 504 -~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
..+..++.+.++++||+.+++...
T Consensus 331 ~~rt~~e~~~ll~~AGF~~v~~~~~ 355 (368)
T 3reo_A 331 KERTEKEFQALAMASGFRGFKVASC 355 (368)
T ss_dssp CCCCHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccCCHHHHHHHHHHCCCeeeEEEEe
Confidence 112345678888999999998743
No 482
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.72 E-value=1e-08 Score=98.56 Aligned_cols=109 Identities=14% Similarity=0.089 Sum_probs=75.8
Q ss_pred CCCeEEEeCCcccH----HHHHHHhc-C----CCEEEEEcCChhHHHHHHHHHHhc----CCC---------------C-
Q 008457 376 AGKKVLELGCGCGG----ICSMVAAG-S----ADLVVATDGDSIALDLLAQNVTAN----LKP---------------P- 426 (564)
Q Consensus 376 ~~~~vLelG~G~G~----l~~~~~~~-~----~~~v~~tD~~~~~l~~~~~n~~~n----~~~---------------~- 426 (564)
+..+|+|+|||||. ++..++.. + ..+|++||+|+.|++.|++++... +.+ .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45699999999996 44444443 2 248999999999999999985210 000 0
Q ss_pred -------CCCceEEEEeecCCCccchhhhhhc-CCCccEEEEeceeeCC--CChHHHHHHHHHHhhccCCCCCCCCCcEE
Q 008457 427 -------FLAKLITKRLEWGNRDHIEAIKEEN-NEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAF 496 (564)
Q Consensus 427 -------~~~~i~~~~l~w~~~~~~~~~~~~~-~~~fD~Ii~~d~~y~~--~~~~~l~~~~~~ll~~~~g~~~~~~~~~~ 496 (564)
....+.+...|+.+. +++ .++||+|++.+++.+. +....+++.+.+.| +|+| .+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~-------~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L-~pgG--------~L 248 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK-------QYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLL-KPDG--------LL 248 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS-------SCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGE-EEEE--------EE
T ss_pred ceeechhhcccCeEEecccCCC-------CCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHh-CCCc--------EE
Confidence 012577777777642 122 3689999999886443 34589999999999 9988 77
Q ss_pred EEEE
Q 008457 497 ILCH 500 (564)
Q Consensus 497 ~~~~ 500 (564)
++.+
T Consensus 249 ~lg~ 252 (274)
T 1af7_A 249 FAGH 252 (274)
T ss_dssp EECT
T ss_pred EEEe
Confidence 6643
No 483
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.72 E-value=3.1e-08 Score=98.22 Aligned_cols=109 Identities=17% Similarity=0.127 Sum_probs=76.6
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhc--CCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTAN--LKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n--~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
..++|||||||+|.++..++... ..+|+++|+++.+++.+++|+... ++. ..++++...|+.+ .+.....
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~--~~rv~~~~~D~~~-----~l~~~~~ 192 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE--DPRVNLVIGDGVA-----FLKNAAE 192 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG--STTEEEEESCHHH-----HHHTSCT
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC--CCcEEEEECCHHH-----HHHhccC
Confidence 56899999999998888777654 469999999999999999998652 221 1457766555421 1112234
Q ss_pred CCccEEEEecee---eCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 008457 453 EGFEVILGTDVS---YIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHI 501 (564)
Q Consensus 453 ~~fD~Ii~~d~~---y~~~~--~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~ 501 (564)
++||+|++ |.. ..... ...+++.+.++| +|+| .+++...
T Consensus 193 ~~fDlIi~-d~~~p~~~~~~l~~~~~l~~~~~~L-kpgG--------~lv~~~~ 236 (334)
T 1xj5_A 193 GSYDAVIV-DSSDPIGPAKELFEKPFFQSVARAL-RPGG--------VVCTQAE 236 (334)
T ss_dssp TCEEEEEE-CCCCTTSGGGGGGSHHHHHHHHHHE-EEEE--------EEEEECC
T ss_pred CCccEEEE-CCCCccCcchhhhHHHHHHHHHHhc-CCCc--------EEEEecC
Confidence 68999996 332 11111 478999999999 9988 7776533
No 484
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.72 E-value=3.2e-08 Score=100.44 Aligned_cols=123 Identities=9% Similarity=-0.003 Sum_probs=90.9
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
..++.+|||+|||+|.++..++... ..+++++|+ +.+++.+++. .++.+...|..+. ++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~--------~~- 266 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----------SGIEHVGGDMFAS--------VP- 266 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC--------CC-
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----------CCCEEEeCCcccC--------CC-
Confidence 4567899999999998888887765 458999999 8888765531 3467766665431 12
Q ss_pred CCccEEEEeceeeCCCChH--HHHHHHHHHhhccCCCCCCCCCcEEEEEEeec---------------------------
Q 008457 453 EGFEVILGTDVSYIPEAIL--PLFATAKELTASSNKSLREDQQPAFILCHIFR--------------------------- 503 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~~~~--~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r--------------------------- 503 (564)
.||+|++..++++..+.. .+++.+.++| +|+| .+++.....
T Consensus 267 -~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 336 (372)
T 1fp1_D 267 -QGDAMILKAVCHNWSDEKCIEFLSNCHKAL-SPNG--------KVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGR 336 (372)
T ss_dssp -CEEEEEEESSGGGSCHHHHHHHHHHHHHHE-EEEE--------EEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCC
T ss_pred -CCCEEEEecccccCCHHHHHHHHHHHHHhc-CCCC--------EEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCc
Confidence 399999999999887776 9999999999 9987 777663221
Q ss_pred cCChhHHHHHHHHcCCeEEEEcC
Q 008457 504 QVDEPSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 504 ~~~~~~~~~~~~~~g~~~~~~~~ 526 (564)
..+...+.+.++++||++.++..
T Consensus 337 ~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 337 ERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp CEEHHHHHHHHHHTTCSEEEEEE
T ss_pred cCCHHHHHHHHHHCCCceEEEEE
Confidence 01223566777889999998874
No 485
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.72 E-value=7.6e-08 Score=100.14 Aligned_cols=137 Identities=15% Similarity=0.154 Sum_probs=88.5
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC--CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEee
Q 008457 360 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 437 (564)
Q Consensus 360 ~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~--~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~ 437 (564)
++.+++..+.-. ..++.+|||+|||+|+.+..++... ..+|+++|+++.+++.+++|+..++. .++.+...|
T Consensus 103 ~s~l~~~~L~~~--~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~----~nv~~~~~D 176 (479)
T 2frx_A 103 SSMLPVAALFAD--GNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI----SNVALTHFD 176 (479)
T ss_dssp HHHHHHHHHTTT--TCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC----CSEEEECCC
T ss_pred HHHHHHHHhCcc--cCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CcEEEEeCC
Confidence 344555555322 2267899999999999998888753 46999999999999999999999876 346665444
Q ss_pred cCCCccchhhhhhcCCCccEEEEeceeeC--------CC---------------ChHHHHHHHHHHhhccCCCCCCCCCc
Q 008457 438 WGNRDHIEAIKEENNEGFEVILGTDVSYI--------PE---------------AILPLFATAKELTASSNKSLREDQQP 494 (564)
Q Consensus 438 w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~--------~~---------------~~~~l~~~~~~ll~~~~g~~~~~~~~ 494 (564)
..+ +....++.||+|++ |+.+. ++ ....+++.+.++| +|+|
T Consensus 177 ~~~------~~~~~~~~fD~Il~-D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L-kpGG-------- 240 (479)
T 2frx_A 177 GRV------FGAAVPEMFDAILL-DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHAL-RPGG-------- 240 (479)
T ss_dssp STT------HHHHSTTCEEEEEE-ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHE-EEEE--------
T ss_pred HHH------hhhhccccCCEEEE-CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhc-CCCC--------
Confidence 322 11223468999985 22221 11 1246788899999 9987
Q ss_pred EEEEEEee--ccCChhHHHHHHHHcC
Q 008457 495 AFILCHIF--RQVDEPSMLSAATQCG 518 (564)
Q Consensus 495 ~~~~~~~~--r~~~~~~~~~~~~~~g 518 (564)
+++.+... ..+.+......+++.+
T Consensus 241 ~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 241 TLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp EEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred EEEEecccCCcccCHHHHHHHHHHCC
Confidence 66655433 2233323334445554
No 486
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.72 E-value=2.4e-08 Score=100.69 Aligned_cols=103 Identities=18% Similarity=0.089 Sum_probs=76.9
Q ss_pred CCCeEEEeCCcccHHHHHHHhc-CCCEEEEEcCChhHHHHHHHHHHhc---------------CCCCCCCceEEEEeecC
Q 008457 376 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTAN---------------LKPPFLAKLITKRLEWG 439 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~-~~~~v~~tD~~~~~l~~~~~n~~~n---------------~~~~~~~~i~~~~l~w~ 439 (564)
++.+|||+|||+|.++..++.. ++.+|+++|+++.+++.+++|++.| ++ ..+.+...|..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl----~~i~v~~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE----KTIVINHDDAN 122 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS----SEEEEEESCHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC----CceEEEcCcHH
Confidence 6789999999999988888876 5568999999999999999999999 44 22555443321
Q ss_pred CCccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 008457 440 NRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 501 (564)
Q Consensus 440 ~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~ 501 (564)
..+ .....+||+|+ .|..+ ....+++.+.++| +++| .++++..
T Consensus 123 -----~~~-~~~~~~fD~I~-lDP~~---~~~~~l~~a~~~l-k~gG--------~l~vt~t 165 (378)
T 2dul_A 123 -----RLM-AERHRYFHFID-LDPFG---SPMEFLDTALRSA-KRRG--------ILGVTAT 165 (378)
T ss_dssp -----HHH-HHSTTCEEEEE-ECCSS---CCHHHHHHHHHHE-EEEE--------EEEEEEC
T ss_pred -----HHH-HhccCCCCEEE-eCCCC---CHHHHHHHHHHhc-CCCC--------EEEEEee
Confidence 111 11245899998 67633 3478899999999 9877 7777653
No 487
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.68 E-value=2.7e-08 Score=96.13 Aligned_cols=108 Identities=13% Similarity=0.058 Sum_probs=76.5
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCC
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNR 441 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~ 441 (564)
.+++++..... .++.+|||+|||+|.++..++... +.+|+++|+++.+++.++++. .++.+...|+.+.
T Consensus 73 ~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~ 142 (269)
T 1p91_A 73 AIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRL 142 (269)
T ss_dssp HHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSC
T ss_pred HHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhC
Confidence 34444443211 367899999999998887777763 569999999999999998873 2245555554332
Q ss_pred ccchhhhhhcCCCccEEEEeceeeCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 008457 442 DHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 503 (564)
Q Consensus 442 ~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r 503 (564)
++.+++||+|++..+ ...++.+.++| +|+| .+++.....
T Consensus 143 -------~~~~~~fD~v~~~~~-------~~~l~~~~~~L-~pgG--------~l~~~~~~~ 181 (269)
T 1p91_A 143 -------PFSDTSMDAIIRIYA-------PCKAEELARVV-KPGG--------WVITATPGP 181 (269)
T ss_dssp -------SBCTTCEEEEEEESC-------CCCHHHHHHHE-EEEE--------EEEEEEECT
T ss_pred -------CCCCCceeEEEEeCC-------hhhHHHHHHhc-CCCc--------EEEEEEcCH
Confidence 234568999998654 23589999999 9988 777766543
No 488
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.67 E-value=4.8e-08 Score=96.39 Aligned_cols=133 Identities=14% Similarity=0.158 Sum_probs=85.4
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHh-cCCCCCCCceEEEEeecCCCccchhhhhhcCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTA-NLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 453 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~-n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~ 453 (564)
.+++|||||||+|.++..++... ..+|+++|+++.+++.+++|+.. |.......++++...|.. +.+ +...+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~-----~~l-~~~~~ 150 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDAR-----AYL-ERTEE 150 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHH-----HHH-HHCCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHH-----HHH-HhcCC
Confidence 55799999999998888777753 56999999999999999998764 221001145666544321 111 22357
Q ss_pred CccEEEEeceeeCC---C-----ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecc-C--C-hhHHHHHHHHcCCeE
Q 008457 454 GFEVILGTDVSYIP---E-----AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-V--D-EPSMLSAATQCGFRL 521 (564)
Q Consensus 454 ~fD~Ii~~d~~y~~---~-----~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~-~--~-~~~~~~~~~~~g~~~ 521 (564)
+||+|++ |..... . ....+++.+.++| +|+| .+++...... . . ...+.+.+++. |..
T Consensus 151 ~fD~Ii~-d~~~~~~~~~~~~~l~~~~~l~~~~~~L-kpgG--------~lv~~~~~~~~~~~~~~~~~~~~l~~~-F~~ 219 (314)
T 1uir_A 151 RYDVVII-DLTDPVGEDNPARLLYTVEFYRLVKAHL-NPGG--------VMGMQTGMILLTHHRVHPVVHRTVREA-FRY 219 (314)
T ss_dssp CEEEEEE-ECCCCBSTTCGGGGGSSHHHHHHHHHTE-EEEE--------EEEEEEEEECC---CHHHHHHHHHHTT-CSE
T ss_pred CccEEEE-CCCCcccccCcchhccHHHHHHHHHHhc-CCCc--------EEEEEccCccccCHHHHHHHHHHHHHH-CCc
Confidence 8999996 443322 1 1478899999999 9988 7766543322 1 1 23455666554 444
Q ss_pred EEEc
Q 008457 522 VDKW 525 (564)
Q Consensus 522 ~~~~ 525 (564)
...+
T Consensus 220 v~~~ 223 (314)
T 1uir_A 220 VRSY 223 (314)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 4443
No 489
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.67 E-value=2.1e-08 Score=98.87 Aligned_cols=108 Identities=22% Similarity=0.197 Sum_probs=78.1
Q ss_pred CCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccC---------CCeeEEEecCCcccccCCC--
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE---------TRVSTFVCDLISDDLSRQI-- 142 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~---------~~i~~~~~d~~~~~~~~~~-- 142 (564)
.++.+||+||||+|..++.+++..+ .+|+++|+++.+++.|++.+.... .+++++.+|....-- ..
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~--~~~~ 263 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLK--RYAK 263 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHH--HHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHH--hhhc
Confidence 4678999999999999999888754 789999999999999999865311 268999999864211 11
Q ss_pred CCCceeEEEEcccc-cCC-Chh--HHHHHHHHH----HhccCCCeEEEEE
Q 008457 143 SPSSIDIVTMVFVL-SAV-SPE--KMSLVLQNI----KKVLKPTGYVLFR 184 (564)
Q Consensus 143 ~~~~fD~V~~~~vl-~~~-~~~--~~~~~l~~~----~r~LkpgG~lii~ 184 (564)
..++||+|++...- ..- .+. --..+++.+ .++|+|||++++.
T Consensus 264 ~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 264 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 24689999996432 110 011 124556665 8999999999885
No 490
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.67 E-value=5e-08 Score=96.77 Aligned_cols=167 Identities=13% Similarity=0.178 Sum_probs=106.8
Q ss_pred CCCCeEEEEcCCccccHHHHHHh----------------CCCcEEEEEeCChHHHHHHHhcccccC--CCeeEEEecCCc
Q 008457 74 AGRKDVLEVGCGAGNTIFPLIAA----------------YPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLIS 135 (564)
Q Consensus 74 ~~~~~VLDiGcG~G~~~~~l~~~----------------~~~~~v~~iD~s~~~l~~a~~~~~~~~--~~i~~~~~d~~~ 135 (564)
....+|+|+||++|.++..+... .|..+|+..|+.......+.+...... .+.-|+.+...
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpg- 128 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPG- 128 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEES-
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecch-
Confidence 45688999999999888655432 356889999998888877776654211 12344444322
Q ss_pred ccccCCCCCCceeEEEEcccccCCCh-------------------------------hHHHHHHHHHHhccCCCeEEEEE
Q 008457 136 DDLSRQISPSSIDIVTMVFVLSAVSP-------------------------------EKMSLVLQNIKKVLKPTGYVLFR 184 (564)
Q Consensus 136 ~~~~~~~~~~~fD~V~~~~vl~~~~~-------------------------------~~~~~~l~~~~r~LkpgG~lii~ 184 (564)
.-....||++++|+|+++.+|||++. .|...+|+..++.|+|||.+++.
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 21233578999999999999999852 24566799999999999999998
Q ss_pred ecCCCchhh---------hhhccccccc-ccceeec----CCCceeeccCHHHHHHHHHhCC-CcEEEeeee
Q 008457 185 DYAIGDLAQ---------ERLTGKDQKI-SENFYVR----GDGTRAFYFSNDFLTSLFKENG-FDVEELGLC 241 (564)
Q Consensus 185 ~~~~~~~~~---------~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~ 241 (564)
..+.++... ..+...+..+ .++.... .-....|+.+.++++..+++.| |.+......
T Consensus 209 ~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~ 280 (359)
T 1m6e_X 209 ILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEAS 280 (359)
T ss_dssp EEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEE
T ss_pred EecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 776544210 0000000000 0000000 0123345678999999999985 577766554
No 491
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.67 E-value=4.3e-08 Score=95.51 Aligned_cols=93 Identities=15% Similarity=0.228 Sum_probs=73.1
Q ss_pred hhHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccc-cC
Q 008457 62 YLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDL-SR 140 (564)
Q Consensus 62 ~~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~-~~ 140 (564)
.+.....+.+...++.+|||+|||+|.++..+++..|+.+|+|+|.|+.|++.|+++....+.++.++++|+..... ..
T Consensus 13 vLl~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 13 VMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLK 92 (301)
T ss_dssp TTHHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHH
Confidence 44556666776678899999999999999999999877899999999999999999876555789999999864321 00
Q ss_pred CCCCCceeEEEEcc
Q 008457 141 QISPSSIDIVTMVF 154 (564)
Q Consensus 141 ~~~~~~fD~V~~~~ 154 (564)
....++||.|++..
T Consensus 93 ~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 93 TLGIEKVDGILMDL 106 (301)
T ss_dssp HTTCSCEEEEEEEC
T ss_pred hcCCCCCCEEEEcC
Confidence 11125799999854
No 492
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.67 E-value=1.3e-07 Score=95.46 Aligned_cols=124 Identities=15% Similarity=0.050 Sum_probs=90.9
Q ss_pred CCCCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcC
Q 008457 374 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 452 (564)
Q Consensus 374 ~~~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~ 452 (564)
..+..+|||+|||+|.++..++... ..+++++|+ +.+++.++++ .++.+...|..+. ++.
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~D~~~~--------~p~ 259 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF----------PGVTHVGGDMFKE--------VPS 259 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC--------CCC
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc----------CCeEEEeCCcCCC--------CCC
Confidence 4567899999999998888877765 458999999 8887755431 4677777776531 233
Q ss_pred CCccEEEEeceeeCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec---------------------------
Q 008457 453 EGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFR--------------------------- 503 (564)
Q Consensus 453 ~~fD~Ii~~d~~y~~~--~~~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r--------------------------- 503 (564)
. |+|++..++++.. ....+++.++++| +|+| .+++.....
T Consensus 260 -~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L-~pgG--------~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g 328 (364)
T 3p9c_A 260 -G-DTILMKWILHDWSDQHCATLLKNCYDAL-PAHG--------KVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGG 328 (364)
T ss_dssp -C-SEEEEESCGGGSCHHHHHHHHHHHHHHS-CTTC--------EEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSC
T ss_pred -C-CEEEehHHhccCCHHHHHHHHHHHHHHc-CCCC--------EEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCC
Confidence 3 9999999998764 4568999999999 9988 666653321
Q ss_pred -cCChhHHHHHHHHcCCeEEEEcCC
Q 008457 504 -QVDEPSMLSAATQCGFRLVDKWPS 527 (564)
Q Consensus 504 -~~~~~~~~~~~~~~g~~~~~~~~~ 527 (564)
..+..++.+.++++||+..++...
T Consensus 329 ~~rt~~e~~~ll~~AGF~~v~~~~~ 353 (364)
T 3p9c_A 329 RERYEREFQALARGAGFTGVKSTYI 353 (364)
T ss_dssp CCCBHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccCCHHHHHHHHHHCCCceEEEEEc
Confidence 112345677888999999988743
No 493
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.66 E-value=8.5e-08 Score=91.95 Aligned_cols=99 Identities=14% Similarity=0.048 Sum_probs=73.5
Q ss_pred hHHHHhhhccCCCCCeEEEEcCCccccHHHHHHhCCCcEEEEEeCChHHHHHHHhcccccCCCeeEEEecCCcccccCCC
Q 008457 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQI 142 (564)
Q Consensus 63 ~~~~~~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~~iD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 142 (564)
+...+.+.+...++ +|||||||+|.++..|++. +.+|+++|+++.|++.++++.. ..+++++++|+...++..
T Consensus 35 i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~l~~~~~~-- 107 (271)
T 3fut_A 35 HLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLS--GLPVRLVFQDALLYPWEE-- 107 (271)
T ss_dssp HHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTT--TSSEEEEESCGGGSCGGG--
T ss_pred HHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcC--CCCEEEEECChhhCChhh--
Confidence 44555566666777 9999999999999999998 5789999999999999998875 368999999997654421
Q ss_pred CCCceeEEEEcccccCCChhHHHHHHHH
Q 008457 143 SPSSIDIVTMVFVLSAVSPEKMSLVLQN 170 (564)
Q Consensus 143 ~~~~fD~V~~~~vl~~~~~~~~~~~l~~ 170 (564)
...+|.|+++.-. +++..-+..++..
T Consensus 108 -~~~~~~iv~NlPy-~iss~il~~ll~~ 133 (271)
T 3fut_A 108 -VPQGSLLVANLPY-HIATPLVTRLLKT 133 (271)
T ss_dssp -SCTTEEEEEEECS-SCCHHHHHHHHHH
T ss_pred -ccCccEEEecCcc-cccHHHHHHHhcC
Confidence 1257888887654 4443344444443
No 494
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.64 E-value=1.2e-07 Score=98.05 Aligned_cols=141 Identities=16% Similarity=0.119 Sum_probs=92.4
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCC-CEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEee
Q 008457 359 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 437 (564)
Q Consensus 359 ~~~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~-~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~ 437 (564)
.++..++..+. ..++.+|||+|||+|+.+..++.... .+|+++|+++.+++.+++|+..++.. +.+...|
T Consensus 233 ~~s~~~~~~l~----~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~-----~~~~~~D 303 (429)
T 1sqg_A 233 ASAQGCMTWLA----PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-----ATVKQGD 303 (429)
T ss_dssp HHHHTHHHHHC----CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC-----CEEEECC
T ss_pred HHHHHHHHHcC----CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC-----eEEEeCc
Confidence 34555555553 23678999999999999988887654 69999999999999999999988752 4555555
Q ss_pred cCCCccchhhhhhcCCCccEEEEeceeeC-------CCC---------h-------HHHHHHHHHHhhccCCCCCCCCCc
Q 008457 438 WGNRDHIEAIKEENNEGFEVILGTDVSYI-------PEA---------I-------LPLFATAKELTASSNKSLREDQQP 494 (564)
Q Consensus 438 w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~-------~~~---------~-------~~l~~~~~~ll~~~~g~~~~~~~~ 494 (564)
..+.. ..+.+++||+|++ |..+. ... + ..+++.+.++| +|+|
T Consensus 304 ~~~~~-----~~~~~~~fD~Vl~-D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~L-kpGG-------- 368 (429)
T 1sqg_A 304 GRYPS-----QWCGEQQFDRILL-DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL-KTGG-------- 368 (429)
T ss_dssp TTCTH-----HHHTTCCEEEEEE-ECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGE-EEEE--------
T ss_pred hhhch-----hhcccCCCCEEEE-eCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhc-CCCC--------
Confidence 44321 1134568999985 32221 111 1 47788889999 9987
Q ss_pred EEEEEEe--eccCChhHHHHHHHHc-CCeEEE
Q 008457 495 AFILCHI--FRQVDEPSMLSAATQC-GFRLVD 523 (564)
Q Consensus 495 ~~~~~~~--~r~~~~~~~~~~~~~~-g~~~~~ 523 (564)
.++++.. .....+..+...+.+. +|++..
T Consensus 369 ~lvystcs~~~~ene~~v~~~l~~~~~~~~~~ 400 (429)
T 1sqg_A 369 TLVYATCSVLPEENSLQIKAFLQRTADAELCE 400 (429)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHCTTCEECS
T ss_pred EEEEEECCCChhhHHHHHHHHHHhCCCCEEeC
Confidence 6666543 2333333344444454 676643
No 495
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.63 E-value=2e-07 Score=94.51 Aligned_cols=109 Identities=17% Similarity=0.124 Sum_probs=81.2
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCC---------------------------------------CEEE
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSA---------------------------------------DLVV 403 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~---------------------------------------~~v~ 403 (564)
.||..|.......++.+|||+|||+|.+.+.++.... .+|+
T Consensus 182 ~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 182 TLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 4677666655556788999999999988887765422 4799
Q ss_pred EEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeCC-----CChHHHHHHHH
Q 008457 404 ATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP-----EAILPLFATAK 478 (564)
Q Consensus 404 ~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~-----~~~~~l~~~~~ 478 (564)
++|+++.+++.++.|+..+++. +.+.+...|..+.. .+.+||+|+++ ..|.. ..+..+.+.+.
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl~---~~i~~~~~D~~~l~--------~~~~~D~Iv~N-PPyg~rl~~~~~l~~ly~~lg 329 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGVD---EYIEFNVGDATQFK--------SEDEFGFIITN-PPYGERLEDKDSVKQLYKELG 329 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTCG---GGEEEEECCGGGCC--------CSCBSCEEEEC-CCCCCSHHHHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHcCCC---CceEEEECChhhcC--------cCCCCcEEEEC-CCCcCccCCHHHHHHHHHHHH
Confidence 9999999999999999999874 46777766654321 23589998854 45653 34667788888
Q ss_pred HHhhcc
Q 008457 479 ELTASS 484 (564)
Q Consensus 479 ~ll~~~ 484 (564)
+.| ++
T Consensus 330 ~~l-k~ 334 (385)
T 3ldu_A 330 YAF-RK 334 (385)
T ss_dssp HHH-HT
T ss_pred HHH-hh
Confidence 888 65
No 496
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.63 E-value=2.6e-07 Score=93.45 Aligned_cols=71 Identities=23% Similarity=0.194 Sum_probs=54.0
Q ss_pred HHHHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCCCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEee
Q 008457 361 AHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 437 (564)
Q Consensus 361 ~~~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~ 437 (564)
+..+..++...... .+.+|||||||+|.++..++. .+.+|+++|+++.+++.+++|+..|++ .++.+...|
T Consensus 199 ~~~l~~~~~~~~~~-~~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng~----~~v~~~~~d 269 (369)
T 3bt7_A 199 NIQMLEWALDVTKG-SKGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANHI----DNVQIIRMA 269 (369)
T ss_dssp HHHHHHHHHHHTTT-CCSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTTC----CSEEEECCC
T ss_pred HHHHHHHHHHHhhc-CCCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEECC
Confidence 45566666554332 367899999999988876654 567999999999999999999999987 346655443
No 497
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.62 E-value=5.6e-08 Score=95.61 Aligned_cols=139 Identities=18% Similarity=0.127 Sum_probs=83.7
Q ss_pred CCCeEEEeCCcccHHHHHHHhcC-CCEEEEEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCC
Q 008457 376 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 454 (564)
Q Consensus 376 ~~~~vLelG~G~G~l~~~~~~~~-~~~v~~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~ 454 (564)
..++|||||||+|.++..++... ..+|+++|+++.+++.+++|+..........++++...|. .+.+ +...++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~-----~~~l-~~~~~~ 181 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDG-----FEFL-KNHKNE 181 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCH-----HHHH-HHCTTC
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChH-----HHHH-HhcCCC
Confidence 45799999999998888777653 5799999999999999999976531000124566654332 1112 124568
Q ss_pred ccEEEEeceeeC---CC-Ch-HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeeccCCh---hHHHHHHHHcCCeEEEEcC
Q 008457 455 FEVILGTDVSYI---PE-AI-LPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE---PSMLSAATQCGFRLVDKWP 526 (564)
Q Consensus 455 fD~Ii~~d~~y~---~~-~~-~~l~~~~~~ll~~~~g~~~~~~~~~~~~~~~~r~~~~---~~~~~~~~~~g~~~~~~~~ 526 (564)
||+|++ |.... .. .. ..+++.+.++| +|+| ++++......... ....+.+++. |...+++.
T Consensus 182 fD~Ii~-d~~~~~~~~~~l~t~~~l~~~~~~L-kpgG--------~lv~~~~~~~~~~~~~~~~~~~l~~v-F~~v~~~~ 250 (314)
T 2b2c_A 182 FDVIIT-DSSDPVGPAESLFGQSYYELLRDAL-KEDG--------ILSSQGESVWLHLPLIAHLVAFNRKI-FPAVTYAQ 250 (314)
T ss_dssp EEEEEE-CCC-------------HHHHHHHHE-EEEE--------EEEEECCCTTTCHHHHHHHHHHHHHH-CSEEEEEE
T ss_pred ceEEEE-cCCCCCCcchhhhHHHHHHHHHhhc-CCCe--------EEEEECCCcccCHHHHHHHHHHHHHH-CCcceEEE
Confidence 999995 44221 11 12 78899999999 9988 7766542221121 2344555444 54444443
Q ss_pred CCCCC
Q 008457 527 SKNSA 531 (564)
Q Consensus 527 ~~~~~ 531 (564)
...|.
T Consensus 251 ~~iP~ 255 (314)
T 2b2c_A 251 SIVST 255 (314)
T ss_dssp EECTT
T ss_pred EEecC
Confidence 33333
No 498
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.61 E-value=3.2e-07 Score=93.07 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=78.6
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCC---------------------------------------CEEE
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSA---------------------------------------DLVV 403 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~---------------------------------------~~v~ 403 (564)
.||..+.......++..|||.|||+|.+.+.++.... .+|+
T Consensus 188 ~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 267 (393)
T 3k0b_A 188 TMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNII 267 (393)
T ss_dssp HHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEE
Confidence 4555555444445778999999999988877775432 3599
Q ss_pred EEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeCC-----CChHHHHHHHH
Q 008457 404 ATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP-----EAILPLFATAK 478 (564)
Q Consensus 404 ~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~-----~~~~~l~~~~~ 478 (564)
++|+|+.+++.++.|+..+++. +.+.+...|..+.. .+.+||+|++ +..|.. ..+..+.+.+.
T Consensus 268 GvDid~~al~~Ar~Na~~~gl~---~~I~~~~~D~~~~~--------~~~~fD~Iv~-NPPYg~rl~~~~~l~~ly~~lg 335 (393)
T 3k0b_A 268 GGDIDARLIEIAKQNAVEAGLG---DLITFRQLQVADFQ--------TEDEYGVVVA-NPPYGERLEDEEAVRQLYREMG 335 (393)
T ss_dssp EEESCHHHHHHHHHHHHHTTCT---TCSEEEECCGGGCC--------CCCCSCEEEE-CCCCCCSHHHHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHcCCC---CceEEEECChHhCC--------CCCCCCEEEE-CCCCccccCCchhHHHHHHHHH
Confidence 9999999999999999999875 45677666554321 2358999885 556653 34566778888
Q ss_pred HHhhcc
Q 008457 479 ELTASS 484 (564)
Q Consensus 479 ~ll~~~ 484 (564)
+.| ++
T Consensus 336 ~~l-k~ 340 (393)
T 3k0b_A 336 IVY-KR 340 (393)
T ss_dssp HHH-HT
T ss_pred HHH-hc
Confidence 888 65
No 499
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.61 E-value=6.5e-07 Score=90.37 Aligned_cols=109 Identities=17% Similarity=0.162 Sum_probs=79.7
Q ss_pred HHHHHHhcCCCCCCCCeEEEeCCcccHHHHHHHhcCC---------------------------------------CEEE
Q 008457 363 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSA---------------------------------------DLVV 403 (564)
Q Consensus 363 ~l~~~l~~~~~~~~~~~vLelG~G~G~l~~~~~~~~~---------------------------------------~~v~ 403 (564)
.||..|.......++..|||.+||+|.+.+.++.... .+|+
T Consensus 181 ~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 4666555544445788999999999998887775432 3599
Q ss_pred EEcCChhHHHHHHHHHHhcCCCCCCCceEEEEeecCCCccchhhhhhcCCCccEEEEeceeeCCC-----ChHHHHHHHH
Q 008457 404 ATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIPE-----AILPLFATAK 478 (564)
Q Consensus 404 ~tD~~~~~l~~~~~n~~~n~~~~~~~~i~~~~l~w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~-----~~~~l~~~~~ 478 (564)
++|+|+.+++.+++|+..+++. +.+.+...|..+.. .+.+||+|+ +|..|... .+..|.+.+.
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~---~~I~~~~~D~~~l~--------~~~~fD~Iv-~NPPYG~rl~~~~~l~~ly~~lg 328 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLE---DVVKLKQMRLQDFK--------TNKINGVLI-SNPPYGERLLDDKAVDILYNEMG 328 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCT---TTEEEEECCGGGCC--------CCCCSCEEE-ECCCCTTTTSCHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHcCCC---CceEEEECChHHCC--------ccCCcCEEE-ECCchhhccCCHHHHHHHHHHHH
Confidence 9999999999999999999875 45777666554321 234899988 56667533 4667888888
Q ss_pred HHhhcc
Q 008457 479 ELTASS 484 (564)
Q Consensus 479 ~ll~~~ 484 (564)
+.| ++
T Consensus 329 ~~l-k~ 333 (384)
T 3ldg_A 329 ETF-AP 333 (384)
T ss_dssp HHH-TT
T ss_pred HHH-hh
Confidence 888 65
No 500
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.61 E-value=2.1e-07 Score=93.93 Aligned_cols=114 Identities=11% Similarity=0.066 Sum_probs=85.1
Q ss_pred hhccCCCCCeEEEEcCCccccHHHHHHhCCC--------------------------------------cEEEEEeCChH
Q 008457 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPD--------------------------------------VFVYACDFSPR 110 (564)
Q Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~--------------------------------------~~v~~iD~s~~ 110 (564)
.+....++..|||.+||+|.++...+....+ .+++|+|+++.
T Consensus 188 ~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~ 267 (384)
T 3ldg_A 188 LLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGR 267 (384)
T ss_dssp HHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHH
Confidence 3344467889999999999999887765322 46999999999
Q ss_pred HHHHHHhcccccC--CCeeEEEecCCcccccCCCCCCceeEEEEccccc--CCChhHHHHHHHHHHhccCC--CeEEEEE
Q 008457 111 AVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVTMVFVLS--AVSPEKMSLVLQNIKKVLKP--TGYVLFR 184 (564)
Q Consensus 111 ~l~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~fD~V~~~~vl~--~~~~~~~~~~l~~~~r~Lkp--gG~lii~ 184 (564)
|++.|+++....+ ..+++.+.|+.... ...+||+|+++--+. .-...+...+++++.+.||+ ||.+++.
T Consensus 268 al~~Ar~Na~~~gl~~~I~~~~~D~~~l~-----~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 342 (384)
T 3ldg_A 268 MVEIARKNAREVGLEDVVKLKQMRLQDFK-----TNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFIL 342 (384)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEECCGGGCC-----CCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred HHHHHHHHHHHcCCCCceEEEECChHHCC-----ccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEE
Confidence 9999999875444 46899999996532 235899999974332 22345677888888888877 8888876
Q ss_pred ecC
Q 008457 185 DYA 187 (564)
Q Consensus 185 ~~~ 187 (564)
+..
T Consensus 343 t~~ 345 (384)
T 3ldg_A 343 TND 345 (384)
T ss_dssp ESC
T ss_pred ECC
Confidence 553
Done!