BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008466
(564 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93ZR1|ELP3_ARATH Elongator complex protein 3 OS=Arabidopsis thaliana GN=HAG3 PE=1
SV=1
Length = 565
Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/564 (92%), Positives = 544/564 (96%), Gaps = 1/564 (0%)
Query: 1 MATAVLPQ-DAKKLPRPGRGGFQAHGLTEEEARVRAIAEIVNSMVELSRKNETVDLNAIK 59
MATAV+ + KK PRPG+GG+Q GLTEEEARVRAI+EIV++M+E S +NE VDLNAIK
Sbjct: 1 MATAVVMNGELKKQPRPGKGGYQGRGLTEEEARVRAISEIVSTMIERSHRNENVDLNAIK 60
Query: 60 SAACRKYGLARAPKLVEMIAALPETDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 119
+AACRKYGLARAPKLVEMIAALP+++RE LLPKLRAKPVRTASGIAVVAVMSKPHRCPHI
Sbjct: 61 TAACRKYGLARAPKLVEMIAALPDSERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 120
Query: 120 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 179
ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV
Sbjct: 121 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 180
Query: 180 DKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVTYSEHGATKCIGMTIET 239
DKVEFILMGGTFMSLPA+YRD+FIRNLHDALSGHTSANVEEAV YSEH ATKCIGMTIET
Sbjct: 181 DKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIET 240
Query: 240 RPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 299
RPDYCLGPHLRQML YGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV
Sbjct: 241 RPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 300
Query: 300 AHMMPDLPNVGVERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP 359
AHMMPDLPNVGVERD+ESF+EFFESP FRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP
Sbjct: 301 AHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP 360
Query: 360 EQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR 419
EQLVDIVARIL+MVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR
Sbjct: 361 EQLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR 420
Query: 420 TREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTC 479
TREAGIQDIHH+IKPE+VELVRRDY ANEGWETFLSYEDTRQDILVGLLRLRKCG+NVTC
Sbjct: 421 TREAGIQDIHHKIKPEQVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGKNVTC 480
Query: 480 PELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVIS 539
PELMGKCS+VRELHVYGTAVPVHGR+ADKLQHQGYGTLLMEEAERIA EHRS K+ VIS
Sbjct: 481 PELMGKCSVVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSNKIGVIS 540
Query: 540 GVGTRHYYRKLGYELEGPYMVKYL 563
GVGTRHYYRKLGYELEGPYMVK+L
Sbjct: 541 GVGTRHYYRKLGYELEGPYMVKHL 564
>sp|Q7X7L3|ELP3_ORYSJ Elongator complex protein 3 OS=Oryza sativa subsp. japonica GN=ELP3
PE=2 SV=2
Length = 573
Score = 1060 bits (2741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/557 (91%), Positives = 535/557 (96%), Gaps = 1/557 (0%)
Query: 8 QDAKKLPRPGRGGF-QAHGLTEEEARVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKY 66
Q ++ P PGRGG GL+EEEARVRAIAEIV++M ELSR+ E VDLNA+KSAACR+Y
Sbjct: 16 QPRRRKPAPGRGGVVLPAGLSEEEARVRAIAEIVSAMGELSRRGEDVDLNALKSAACRRY 75
Query: 67 GLARAPKLVEMIAALPETDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNIC 126
GLARAPKLVEMIAA+PE DR ALLP+LRAKPVRTASGIAVVAVMSKPHRCPHIATTGNIC
Sbjct: 76 GLARAPKLVEMIAAVPEADRAALLPRLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNIC 135
Query: 127 VYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFIL 186
VYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFIL
Sbjct: 136 VYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFIL 195
Query: 187 MGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLG 246
MGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAV YSEHGA KCIGMTIETRPDYCLG
Sbjct: 196 MGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHGAVKCIGMTIETRPDYCLG 255
Query: 247 PHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDL 306
PHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDL
Sbjct: 256 PHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDL 315
Query: 307 PNVGVERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIV 366
PNVGVERDLESFREFFE+P FRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE LVDIV
Sbjct: 316 PNVGVERDLESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPELLVDIV 375
Query: 367 ARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQ 426
ARIL+MVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM+DLGLKCRDVRTREAGIQ
Sbjct: 376 ARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQ 435
Query: 427 DIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKC 486
DIHH+I+P+EVELVRRDY ANEGWETFLSYEDT+QDIL+GLLRLRKCGRNVTCPEL+G+C
Sbjct: 436 DIHHKIRPDEVELVRRDYAANEGWETFLSYEDTQQDILIGLLRLRKCGRNVTCPELVGRC 495
Query: 487 SIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHY 546
SIVRELHVYGTAVPVHGR+ADKLQHQGYGTLLMEEAERIA EHRS+K+AVISGVGTRHY
Sbjct: 496 SIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARKEHRSKKIAVISGVGTRHY 555
Query: 547 YRKLGYELEGPYMVKYL 563
YRKLGYELEGPYMVK L
Sbjct: 556 YRKLGYELEGPYMVKCL 572
>sp|Q5ZHS1|ELP3_CHICK Elongator complex protein 3 OS=Gallus gallus GN=ELP3 PE=2 SV=1
Length = 546
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/545 (74%), Positives = 461/545 (84%)
Query: 20 GFQAHGLTEEEARVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIA 79
G + L+ E + IA+I+ ++E + + V+LN +K+ KYGL+ P+LV++IA
Sbjct: 2 GQKRKDLSHAELMMMTIADIIKQLIEAHEQGKDVNLNKLKTKTSAKYGLSAQPRLVDIIA 61
Query: 80 ALPETDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEY 139
A+P R+AL+PKL+AKP+RTASGIAVVAVM KPHRCPHI TGNICVYCPGGPDSDFEY
Sbjct: 62 AVPPQHRKALVPKLKAKPIRTASGIAVVAVMCKPHRCPHINFTGNICVYCPGGPDSDFEY 121
Query: 140 STQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYR 199
STQSYTGYEPTSMRAIRARY+PY+Q R R++QLK+LGHSVDKVEFI+MGGTFM+LP DYR
Sbjct: 122 STQSYTGYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALPEDYR 181
Query: 200 DYFIRNLHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTR 259
DYFIRNLHDALSGHTS NV EAV YSE TKC+G+TIETRPDYCL HL MLSYGCTR
Sbjct: 182 DYFIRNLHDALSGHTSNNVAEAVKYSERSLTKCVGITIETRPDYCLKRHLSDMLSYGCTR 241
Query: 260 LEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFR 319
LEIGVQS YEDVARDTNRGHTV AV + F LAKDAGFKVVAHMMPDLPN+G+ERD + F
Sbjct: 242 LEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDAGFKVVAHMMPDLPNMGLERDTDQFV 301
Query: 320 EFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRV 379
EFFE+P FR DG+K+YPTLVIRGTGLYELWKTGRY++YPP LVD+VARILA+VPPWTRV
Sbjct: 302 EFFENPAFRPDGMKLYPTLVIRGTGLYELWKTGRYKSYPPSTLVDLVARILALVPPWTRV 361
Query: 380 YRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVEL 439
YRVQRDIPMPLV+SGVE GNLRELALARM DLG +CRDVRTRE GIQ+IHH+++P ++EL
Sbjct: 362 YRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTQCRDVRTREVGIQEIHHKVRPYQIEL 421
Query: 440 VRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAV 499
+RRDYVAN GWETFLSYED QDILVGLLRLRKC PEL G SIVRELHVYG+ V
Sbjct: 422 IRRDYVANGGWETFLSYEDPEQDILVGLLRLRKCSEESFRPELKGGVSIVRELHVYGSVV 481
Query: 500 PVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYM 559
PV R+ K QHQG+G LLMEEAERIA EH S K+AVISGVGTR+YYRK+GYELEGPYM
Sbjct: 482 PVSSRDPSKFQHQGFGMLLMEEAERIAKEEHGSWKIAVISGVGTRNYYRKIGYELEGPYM 541
Query: 560 VKYLE 564
VK L+
Sbjct: 542 VKRLQ 546
>sp|Q5RIC0|ELP3_DANRE Elongator complex protein 3 OS=Danio rerio GN=elp3 PE=2 SV=3
Length = 548
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/538 (74%), Positives = 457/538 (84%)
Query: 26 LTEEEARVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETD 85
L+ E + IA+++ +VE + + ++LN +K+ KYGL+ P+LV++IAA+P
Sbjct: 10 LSRAELMMMTIADVIKQLVEAHEEGKDINLNKVKTKTSAKYGLSAQPRLVDIIAAVPPHY 69
Query: 86 REALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYT 145
R AL+PKL+AKP+RTASGIAVVAVM KPHRCPHI+ TGNICVYCPGGPDSDFEYSTQSYT
Sbjct: 70 RRALVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSDFEYSTQSYT 129
Query: 146 GYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRN 205
GYEPTSMRAIRARY+PY+Q R R++QLK+LGHSVDKVEFI+MGGTFM+LP +YRDYFIRN
Sbjct: 130 GYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRN 189
Query: 206 LHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQ 265
LHDALSGHTS NV EAV YSE TKC+G+TIETRPDYCL HL ML YGCTRLEIGVQ
Sbjct: 190 LHDALSGHTSNNVTEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLGYGCTRLEIGVQ 249
Query: 266 STYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESP 325
S YEDVARDTNRGHTV AV + F LAKDAGFKVVAHMMPDLPNVG+ERD+E F EFFE+P
Sbjct: 250 SVYEDVARDTNRGHTVRAVCESFHLAKDAGFKVVAHMMPDLPNVGMERDVEQFIEFFENP 309
Query: 326 LFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRD 385
FR DGLK+YPTLVIRGTGLYELWKTGRY++Y P LVD+VARILA+VPPWTRVYRVQRD
Sbjct: 310 AFRPDGLKLYPTLVIRGTGLYELWKTGRYKSYSPSALVDLVARILALVPPWTRVYRVQRD 369
Query: 386 IPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYV 445
IPMPLV+SGVE GNLRELALARM D+G +CRDVRTRE GIQ+IHH+++P +VEL+RRDYV
Sbjct: 370 IPMPLVSSGVEHGNLRELALARMKDMGTECRDVRTREVGIQEIHHKVRPYQVELIRRDYV 429
Query: 446 ANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGRE 505
AN GWETFLSYED QDIL+GLLRLR+C PEL G SIVRELHVYG+ VPV R+
Sbjct: 430 ANGGWETFLSYEDPEQDILIGLLRLRRCSPQSFRPELKGGVSIVRELHVYGSVVPVSSRD 489
Query: 506 ADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYL 563
K QHQG+G +LMEEAERIA EH S K+AVISGVGTR+YYRK+GYELEGPYMVK L
Sbjct: 490 PSKFQHQGFGMMLMEEAERIARDEHGSSKLAVISGVGTRNYYRKMGYELEGPYMVKNL 547
>sp|Q5HZM6|ELP3_XENLA Elongator complex protein 3 OS=Xenopus laevis GN=elp3 PE=2 SV=1
Length = 549
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/550 (72%), Positives = 462/550 (84%), Gaps = 2/550 (0%)
Query: 15 RPGRGGFQAHGLTEEEARVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKL 74
+P RG +++ E + +A+++ +VE + + V+LN +K+ KYGL+ P+L
Sbjct: 2 KPDRG--MRGNMSQAELMMMTVADVIKQLVEAHEQGKDVNLNKLKTKTSAKYGLSAQPRL 59
Query: 75 VEMIAALPETDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPD 134
V++IAA+P R+ L+PKL+AKP+RTASGIAVVAVM KPHRCPHI TGNICVYCPGGPD
Sbjct: 60 VDIIAAVPPQYRKILVPKLKAKPIRTASGIAVVAVMCKPHRCPHINFTGNICVYCPGGPD 119
Query: 135 SDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSL 194
SDFEYSTQSYTGYEPTSMRAIRARY+PY+Q R R++QLK+LGH+VDKVEFI+MGGTFM+L
Sbjct: 120 SDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHNVDKVEFIVMGGTFMAL 179
Query: 195 PADYRDYFIRNLHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLS 254
P DYRD+FIRNLHDALSGHTS +V EAV YSE TKC+G+TIETRPDYCL HL ML
Sbjct: 180 PEDYRDFFIRNLHDALSGHTSNSVSEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLC 239
Query: 255 YGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERD 314
YGCTRLEIGVQS YEDVARDTNRGHTV AV + F L+KDAGFKVV+HMMPDLPN+G+ERD
Sbjct: 240 YGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLSKDAGFKVVSHMMPDLPNMGLERD 299
Query: 315 LESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVP 374
+E F EFFE+P FR DG+K+YPTLVIRGTGLYELWKTGRYR+Y P LVD+VARILA+VP
Sbjct: 300 IEQFIEFFENPAFRPDGMKLYPTLVIRGTGLYELWKTGRYRSYSPSTLVDLVARILALVP 359
Query: 375 PWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKP 434
PWTRVYRVQRDIPMPLV+SGVE GNLRELALARM DLG +CRDVRTRE GIQ+IHH+++P
Sbjct: 360 PWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTECRDVRTREVGIQEIHHKVRP 419
Query: 435 EEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHV 494
+VEL+RRDYVAN GWETFLSYED QDIL+GLLRLRKC PEL G SIVRELHV
Sbjct: 420 YQVELIRRDYVANGGWETFLSYEDPEQDILIGLLRLRKCSEESFRPELKGGVSIVRELHV 479
Query: 495 YGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYEL 554
YG+ VP+ R+ K QHQG+G LLMEEAERIA EH S K+AVISGVGTR+YYRK+GYEL
Sbjct: 480 YGSVVPISSRDPSKFQHQGFGMLLMEEAERIARDEHGSWKIAVISGVGTRNYYRKIGYEL 539
Query: 555 EGPYMVKYLE 564
EGPYMVK L+
Sbjct: 540 EGPYMVKRLD 549
>sp|Q9VQZ6|ELP3_DROME Probable elongator complex protein 3 OS=Drosophila melanogaster
GN=Elp3 PE=2 SV=1
Length = 552
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/540 (73%), Positives = 460/540 (85%)
Query: 25 GLTEEEARVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPET 84
GL+ +E +V I EI+ +++ + V+LN +KS KYGL +P+LV++IAA+P+
Sbjct: 10 GLSRQERQVLVIGEIIQELLKAHEAKKDVNLNRMKSLVASKYGLDSSPRLVDIIAAVPQD 69
Query: 85 DREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSY 144
++ LLPKLRAKP+RTASGIAVVAVM KPHRCPHI TGNICVYCPGGPDSDFEYSTQSY
Sbjct: 70 AKKILLPKLRAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSY 129
Query: 145 TGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIR 204
TGYEPTSMRAIR+RY+P++Q R R++QLK+LGHSVDKVEFI+MGGTFM LP +YRDYFIR
Sbjct: 130 TGYEPTSMRAIRSRYDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMCLPEEYRDYFIR 189
Query: 205 NLHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGV 264
NLHDALSGH+SANV EAV YSE TKCIG+TIETRPDYCL H+ MLSYGCTRLEIGV
Sbjct: 190 NLHDALSGHSSANVAEAVRYSEKSRTKCIGITIETRPDYCLKRHISDMLSYGCTRLEIGV 249
Query: 265 QSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFES 324
QS YEDVARDTNRGHTV AV + F L KDAG+K+V HMMPDLPNV ERD+E F E+FE+
Sbjct: 250 QSVYEDVARDTNRGHTVRAVCESFQLGKDAGYKIVTHMMPDLPNVDFERDIEQFIEYFEN 309
Query: 325 PLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQR 384
P FR+DGLKIYPTLVIRGTGLYELWKTGRY++YPP LVD+VA+ILA+VPPWTRVYRVQR
Sbjct: 310 PAFRSDGLKIYPTLVIRGTGLYELWKTGRYKSYPPSMLVDLVAKILALVPPWTRVYRVQR 369
Query: 385 DIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDY 444
DIPMPLV+SGVE GNLRELALARM DLG CRDVRTRE GIQ+IH++++P E+EL+RRDY
Sbjct: 370 DIPMPLVSSGVEHGNLRELALARMKDLGTTCRDVRTREVGIQEIHNKVRPYEIELIRRDY 429
Query: 445 VANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGR 504
VAN GWETFLSYED QDILVGLLRLRKC + PEL G+CSIVRELHVYG+ VPV+ R
Sbjct: 430 VANGGWETFLSYEDPEQDILVGLLRLRKCSPDTFRPELKGECSIVRELHVYGSVVPVNAR 489
Query: 505 EADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYLE 564
+ K QHQG+G LLMEEAERIA EH S K+AVISGVGTR+YYRK+GY+L+GPYM K +E
Sbjct: 490 DPTKFQHQGFGMLLMEEAERIAREEHGSTKLAVISGVGTRNYYRKMGYQLDGPYMSKSIE 549
>sp|Q6NVL5|ELP3_XENTR Elongator complex protein 3 OS=Xenopus tropicalis GN=elp3 PE=2 SV=1
Length = 549
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/538 (73%), Positives = 456/538 (84%)
Query: 27 TEEEARVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETDR 86
++ E + +A+++ +VE + + V+LN +K+ KYGL+ P+LV++IAA+P R
Sbjct: 12 SQAELMMMTVADVIKQLVEAHEQGKDVNLNKLKTKTSAKYGLSAQPRLVDIIAAVPPQYR 71
Query: 87 EALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTG 146
+ L+PKL+AKP+RTASGIAVVAVM KPHRCPHI TGNICVYCPGGPDSDFEYSTQSYTG
Sbjct: 72 KILVPKLKAKPIRTASGIAVVAVMCKPHRCPHINFTGNICVYCPGGPDSDFEYSTQSYTG 131
Query: 147 YEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNL 206
YEPTSMRAIRARY+PY+Q R R++QLK+LGHSVDKVEFI+MGGTFM+L DYRD+FIRNL
Sbjct: 132 YEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALSEDYRDFFIRNL 191
Query: 207 HDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQS 266
HDALSGHTS +V EAV YSE TKC+G+TIETRPDYCL HL MLSYGCTRLEIGVQS
Sbjct: 192 HDALSGHTSNSVSEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLSYGCTRLEIGVQS 251
Query: 267 TYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPL 326
YEDVARDTNRGHTV AV + F +AKDAGFKVV+HMMPDLPNVG+ERD E F EFFE+P
Sbjct: 252 VYEDVARDTNRGHTVKAVCESFHMAKDAGFKVVSHMMPDLPNVGLERDTEQFIEFFENPA 311
Query: 327 FRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDI 386
FR DG+K+YPTLVIRGTGLYELWKTGRYR+Y P LVD+VARILA+VPPWTRVYRVQRDI
Sbjct: 312 FRPDGMKLYPTLVIRGTGLYELWKTGRYRSYSPSTLVDLVARILALVPPWTRVYRVQRDI 371
Query: 387 PMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVA 446
PMPLV+SGVE GNLRELALARM DLG +CRDVRTRE GIQ+IHH+++P +VEL+RRDYVA
Sbjct: 372 PMPLVSSGVEHGNLRELALARMKDLGTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVA 431
Query: 447 NEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREA 506
N GWETFLSYED QDIL+GLLRLRKC PEL G SIVRELHVYG+ VP+ R+
Sbjct: 432 NGGWETFLSYEDPEQDILIGLLRLRKCSEQSFRPELKGGVSIVRELHVYGSVVPISSRDP 491
Query: 507 DKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYLE 564
K QHQG+G LLMEEAERIA EH S K+AVISGVGTR+YYRKLGYELEGPYMVK L+
Sbjct: 492 SKFQHQGFGMLLMEEAERIAREEHGSCKIAVISGVGTRNYYRKLGYELEGPYMVKKLD 549
>sp|Q1ZXC6|ELP3_DICDI Probable elongator complex protein 3 OS=Dictyostelium discoideum
GN=elp3 PE=3 SV=1
Length = 559
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/530 (73%), Positives = 452/530 (85%)
Query: 34 RAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETDREALLPKL 93
+ + EIVN+++ ++ + V+L IK+ K L+ PK V++I+A+PE+ + LLP L
Sbjct: 29 KTVGEIVNALINAYKEGKKVNLLKIKTELAAKNSLSDQPKSVDIISAIPESYKNTLLPLL 88
Query: 94 RAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMR 153
+AKPVRTASGIAVVAVM KPHRCPH+A TGNICVYCPGGPDSDFEYSTQSYTGYEPTSMR
Sbjct: 89 KAKPVRTASGIAVVAVMCKPHRCPHLAMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMR 148
Query: 154 AIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGH 213
AIRARYNP++Q R RIDQLKRLGH+V+KVEFI+MGGTFMSLP+DYRDYFIRNLHDALSGH
Sbjct: 149 AIRARYNPFLQTRHRIDQLKRLGHNVEKVEFIIMGGTFMSLPSDYRDYFIRNLHDALSGH 208
Query: 214 TSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVAR 273
TS NV EAV YSE KC+G+TIETRPD+CL HL ML+YGCTRLEIGVQS +ED+AR
Sbjct: 209 TSNNVAEAVKYSEQSNVKCVGITIETRPDHCLKLHLSNMLTYGCTRLEIGVQSVFEDIAR 268
Query: 274 DTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADGLK 333
DTNRGHTV AV + F LAKD+GFKVVAHMMPDLPN+G+ERD+ F EFFE+P FRADGLK
Sbjct: 269 DTNRGHTVRAVLESFQLAKDSGFKVVAHMMPDLPNMGMERDIYGFMEFFENPAFRADGLK 328
Query: 334 IYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTS 393
IYPTLVIRGTGLYELWKTG Y+NY P+ LVD++A++LA+VPPWTR+YR+QRDIPMPLVTS
Sbjct: 329 IYPTLVIRGTGLYELWKTGTYKNYSPDSLVDLIAKVLALVPPWTRIYRIQRDIPMPLVTS 388
Query: 394 GVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETF 453
GVE GNLREL LARM D G KCRDVRTRE GIQ++HH+IKP++VEL+RRDYVAN GWETF
Sbjct: 389 GVEYGNLRELCLARMKDFGTKCRDVRTREVGIQEVHHKIKPDQVELIRRDYVANGGWETF 448
Query: 454 LSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQG 513
LS+ED +QDIL+GLLRLRKC PEL CSIVRELHVYG+ V +H R+ K QHQG
Sbjct: 449 LSFEDPKQDILIGLLRLRKCSETSFRPELKENCSIVRELHVYGSVVGIHNRDPTKFQHQG 508
Query: 514 YGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYL 563
YGTLLMEEAERIA EH S K+AVI+GVGTRHYYRKLGYEL+G Y+ KYL
Sbjct: 509 YGTLLMEEAERIAREEHGSIKLAVIAGVGTRHYYRKLGYELDGVYVSKYL 558
>sp|Q9H9T3|ELP3_HUMAN Elongator complex protein 3 OS=Homo sapiens GN=ELP3 PE=1 SV=2
Length = 547
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/539 (73%), Positives = 457/539 (84%)
Query: 26 LTEEEARVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETD 85
L+ E + I +++ ++E + + +DLN +K+ KYGL+ P+LV++IAA+P
Sbjct: 9 LSPAELMMLTIGDVIKQLIEAHEQGKDIDLNKVKTKTAAKYGLSAQPRLVDIIAAVPPQY 68
Query: 86 REALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYT 145
R+ L+PKL+AKP+RTASGIAVVAVM KPHRCPHI+ TGNICVYCPGGPDSDFEYSTQSYT
Sbjct: 69 RKVLMPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSDFEYSTQSYT 128
Query: 146 GYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRN 205
GYEPTSMRAIRARY+P++Q R RI+QLK+LGHSVDKVEFI+MGGTFM+LP +YRDYFIRN
Sbjct: 129 GYEPTSMRAIRARYDPFLQTRHRIEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRN 188
Query: 206 LHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQ 265
LHDALSGHTS N+ EAV YSE TKCIG+TIETRPDYC+ HL ML+YGCTRLEIGVQ
Sbjct: 189 LHDALSGHTSNNIYEAVKYSERSLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQ 248
Query: 266 STYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESP 325
S YEDVARDTNRGHTV AV + F LAKD+GFKVVAHMMPDLPNVG+ERD+E F EFFE+P
Sbjct: 249 SVYEDVARDTNRGHTVKAVCESFHLAKDSGFKVVAHMMPDLPNVGLERDIEQFTEFFENP 308
Query: 326 LFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRD 385
FR DGLK+YPTLVIRGTGLYELWK+GRY++Y P LV++VARILA+VPPWTRVYRVQRD
Sbjct: 309 AFRPDGLKLYPTLVIRGTGLYELWKSGRYKSYSPSDLVELVARILALVPPWTRVYRVQRD 368
Query: 386 IPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYV 445
IPMPLV+SGVE GNLRELALARM DLG++CRDVRTRE GIQ+IHH+++P +VELVRRDYV
Sbjct: 369 IPMPLVSSGVEHGNLRELALARMKDLGIQCRDVRTREVGIQEIHHKVRPYQVELVRRDYV 428
Query: 446 ANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGRE 505
AN GWETFLSYED QDIL+GLLRLRKC EL G SIVRELHVYG+ VPV R+
Sbjct: 429 ANGGWETFLSYEDPDQDILIGLLRLRKCSEETFRFELGGGVSIVRELHVYGSVVPVSSRD 488
Query: 506 ADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYLE 564
K QHQG+G LLMEEAERIA EH S K+AVISGVGTR+YYRK+GY L+GPYMVK L+
Sbjct: 489 PTKFQHQGFGMLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKIGYRLQGPYMVKMLK 547
>sp|Q2KJ61|ELP3_BOVIN Elongator complex protein 3 OS=Bos taurus GN=ELP3 PE=2 SV=2
Length = 547
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/539 (72%), Positives = 457/539 (84%)
Query: 26 LTEEEARVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETD 85
L+ + + I +++ ++E + + +DLN +K+ KYGL+ P+LV++IAA+P
Sbjct: 9 LSPAQLMMLTIGDVIKQLIEAHEQGKDIDLNKVKTRTAAKYGLSAQPRLVDIIAAVPPQY 68
Query: 86 REALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYT 145
R+ L+PKL+AKP+RTASGIAVVAVM KPHRCPHI+ TGNICVYCPGGPDSDFEYSTQSYT
Sbjct: 69 RKVLVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSDFEYSTQSYT 128
Query: 146 GYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRN 205
GYEPTSMRAIRARY+PY+Q R RI+QLK+LGHSVDKVEFI+MGGTFM+LP +YRDYFIRN
Sbjct: 129 GYEPTSMRAIRARYDPYLQTRHRIEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRN 188
Query: 206 LHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQ 265
LHDALSGHTS N+ EAV YSE TKCIG+TIETRPDYC+ HL ML+YGCTRLEIGVQ
Sbjct: 189 LHDALSGHTSNNIYEAVKYSERSLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQ 248
Query: 266 STYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESP 325
S YEDVARDTNRGHTV AV + F LAKD+GFKVVAHMMPDLPNVG+ERD+E F EFFE+P
Sbjct: 249 SVYEDVARDTNRGHTVKAVCESFHLAKDSGFKVVAHMMPDLPNVGLERDIEQFTEFFENP 308
Query: 326 LFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRD 385
FR DGLK+YPTLVIRGTGLYELWK+GRY++Y P L+++VARILA+VPPWTRVYRVQRD
Sbjct: 309 AFRPDGLKLYPTLVIRGTGLYELWKSGRYKSYSPSDLIELVARILALVPPWTRVYRVQRD 368
Query: 386 IPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYV 445
IPMPLV+SGVE GNLRELA ARM DLG++CRDVRTRE GIQ+IHH+++P +VELVRRDYV
Sbjct: 369 IPMPLVSSGVEHGNLRELAFARMKDLGIQCRDVRTREVGIQEIHHKVRPYQVELVRRDYV 428
Query: 446 ANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGRE 505
AN GWETFLSYED QDIL+GLLRLRKC EL+G SIVRELHVYG+ VPV R+
Sbjct: 429 ANGGWETFLSYEDPDQDILIGLLRLRKCSEETFRFELVGGVSIVRELHVYGSVVPVSSRD 488
Query: 506 ADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYLE 564
K QHQG+G LLMEEAERIA EH S K+AVISGVGTR+YYRK+GY L+GPYMVK LE
Sbjct: 489 PTKFQHQGFGMLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKIGYRLQGPYMVKTLE 547
>sp|Q9CZX0|ELP3_MOUSE Elongator complex protein 3 OS=Mus musculus GN=Elp3 PE=2 SV=1
Length = 547
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/539 (72%), Positives = 454/539 (84%)
Query: 26 LTEEEARVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETD 85
L+ E + I +++ +VE + + VDLN +K+ KYGLA P+LV++IAA+P
Sbjct: 9 LSPAELMMLTIGDVIKQLVEAHEQGKDVDLNKMKTKTAAKYGLASQPRLVDIIAAVPPHY 68
Query: 86 REALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYT 145
R+ L+PKL+AKPVRTASGIAVVAVM KPHRCPHI+ TGNIC+YCPGGPDSDFEYSTQSYT
Sbjct: 69 RKILIPKLKAKPVRTASGIAVVAVMCKPHRCPHISFTGNICIYCPGGPDSDFEYSTQSYT 128
Query: 146 GYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRN 205
GYEPTSMRAIRARY+P++Q R RI+QLK+LGHSVDKVEFI+MGGTFM+LP +YRDYFIR+
Sbjct: 129 GYEPTSMRAIRARYDPFLQTRHRIEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRS 188
Query: 206 LHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQ 265
LHDALSGHTS N+ EA+ YSE TKC+G+TIETRPDYC+ HL ML+YGCTRLEIGVQ
Sbjct: 189 LHDALSGHTSNNIHEAIKYSERSFTKCVGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQ 248
Query: 266 STYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESP 325
S YEDVARDTNRGHTV A + F LAKD+GFKVV HMMPDLPNVG+ERD+E F EFFE+P
Sbjct: 249 SVYEDVARDTNRGHTVKAACESFHLAKDSGFKVVTHMMPDLPNVGLERDIEQFIEFFENP 308
Query: 326 LFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRD 385
FR DGLK+YPTLVIRGTGLYELWK+GRYR+Y P L+++VARILA+VPPWTRVYRVQRD
Sbjct: 309 AFRPDGLKLYPTLVIRGTGLYELWKSGRYRSYSPSDLIELVARILALVPPWTRVYRVQRD 368
Query: 386 IPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYV 445
IPMPLV+SGVE GNLRELA ARM DLG++CRDVRTRE GIQ+IHH+++P +VELVRRDYV
Sbjct: 369 IPMPLVSSGVEHGNLRELAFARMKDLGIQCRDVRTREVGIQEIHHRVRPYQVELVRRDYV 428
Query: 446 ANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGRE 505
AN GWETFLSYED QDIL+GLLRLRKC EL G SIVRELHVYG+ VPV R+
Sbjct: 429 ANGGWETFLSYEDPDQDILIGLLRLRKCSEETFRFELGGGVSIVRELHVYGSVVPVSSRD 488
Query: 506 ADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYLE 564
K QHQG+G LLMEEAERIA EH S KMAVISGVGTR+YYRK+GY L+GPYMVK L+
Sbjct: 489 PTKFQHQGFGMLLMEEAERIAREEHGSGKMAVISGVGTRNYYRKIGYRLQGPYMVKMLK 547
>sp|Q23651|ELP3_CAEEL Probable elongator complex protein 3 OS=Caenorhabditis elegans
GN=elpc-3 PE=3 SV=2
Length = 547
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/531 (73%), Positives = 448/531 (84%)
Query: 34 RAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETDREALLPKL 93
+ I EIV ++E + + V+LN +K +K GL+ PKLV++IA +P +++LLPKL
Sbjct: 13 QTINEIVKLLIEAHNQKKDVNLNRLKCIVAQKNGLSFQPKLVDIIAGVPSDYKDSLLPKL 72
Query: 94 RAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMR 153
+AKPVRTASGIAVVAVMSKPHRCPHI TGNICVYCPGGPDSDFEYSTQSYTGYEPTSMR
Sbjct: 73 KAKPVRTASGIAVVAVMSKPHRCPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMR 132
Query: 154 AIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGH 213
AIRARYNPY+Q R R++QL +LGHSVDKVEFI+MGGTFMSLP DYRD+FIRNLHDALSGH
Sbjct: 133 AIRARYNPYLQTRGRLNQLMQLGHSVDKVEFIVMGGTFMSLPEDYRDFFIRNLHDALSGH 192
Query: 214 TSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVAR 273
TSA+VEEAV YSE KCIG+TIETRPDYCL HL ML YGCTRLEIGVQSTYEDVAR
Sbjct: 193 TSASVEEAVAYSERSKMKCIGITIETRPDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVAR 252
Query: 274 DTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADGLK 333
DTNRGHTV +V + F +AKD G+KVV HMMPDLPNVG+ERD E F E FESP FR DGLK
Sbjct: 253 DTNRGHTVKSVCETFHMAKDTGYKVVIHMMPDLPNVGLERDKEQFLELFESPAFRPDGLK 312
Query: 334 IYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTS 393
+YPTLVIRGTGLYELWKTGRY++YPP LVD++A IL++VPPWTRVYRVQRDIPMPLV+S
Sbjct: 313 LYPTLVIRGTGLYELWKTGRYQSYPPSVLVDLIATILSLVPPWTRVYRVQRDIPMPLVSS 372
Query: 394 GVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETF 453
GVE GNLRE A+A+M +LGLKCRDVRTRE GIQ+IH++++PE+VEL+RRDY AN GWETF
Sbjct: 373 GVEHGNLREHAMAKMKELGLKCRDVRTREVGIQEIHNKVRPEDVELIRRDYTANGGWETF 432
Query: 454 LSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQG 513
+SYED +QDIL+GLLRLRK PEL G S+VRELHVYG+ V V R+ K QHQG
Sbjct: 433 ISYEDPKQDILIGLLRLRKISDKAHRPELKGNVSVVRELHVYGSVVSVADRDPKKFQHQG 492
Query: 514 YGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYLE 564
YG+LLMEEAERIA EH S K+AVISGVGTR YYRKLGYEL+GPYM K L+
Sbjct: 493 YGSLLMEEAERIAREEHGSDKIAVISGVGTREYYRKLGYELDGPYMSKMLD 543
>sp|Q60LW7|ELP3_CAEBR Probable elongator complex protein 3 OS=Caenorhabditis briggsae
GN=elpc-3 PE=3 SV=1
Length = 548
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/531 (73%), Positives = 446/531 (83%)
Query: 34 RAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETDREALLPKL 93
+ + EIV ++E + + V+LN +K +K GL+ PKLV++IA +P ++ LLPKL
Sbjct: 13 QTVNEIVKLLIEAHNQKKDVNLNRLKCIVAQKNGLSFQPKLVDIIAGVPADYKDTLLPKL 72
Query: 94 RAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMR 153
+AKPVRTASGIAVVAVMSKPHRCPHI TGNICVYCPGGPDSDFEYSTQSYTGYEPTSMR
Sbjct: 73 KAKPVRTASGIAVVAVMSKPHRCPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMR 132
Query: 154 AIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGH 213
AIRARYNPY+Q R R++QL +LGHSVDKVEFI+MGGTFMSLP DYRD+FIRNLHDALSGH
Sbjct: 133 AIRARYNPYLQTRGRLNQLMQLGHSVDKVEFIVMGGTFMSLPEDYRDFFIRNLHDALSGH 192
Query: 214 TSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVAR 273
TSA+VEEAV YSE KCIG+TIETRPDYCL HL ML YGCTRLEIGVQSTYEDVAR
Sbjct: 193 TSASVEEAVAYSERSKMKCIGITIETRPDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVAR 252
Query: 274 DTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADGLK 333
DTNRGHTV +V + F +AKD G+KVV HMMPDLPNVG+ERD E F E FESP FR DGLK
Sbjct: 253 DTNRGHTVKSVCETFHMAKDTGYKVVIHMMPDLPNVGLERDKEQFLELFESPAFRPDGLK 312
Query: 334 IYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTS 393
+YPTLVIRGTGLYELWKTGRY++YPP LVD++A IL++VPPWTRVYRVQRDIPMPLV+S
Sbjct: 313 LYPTLVIRGTGLYELWKTGRYQSYPPSVLVDLIATILSLVPPWTRVYRVQRDIPMPLVSS 372
Query: 394 GVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETF 453
GVE GNLRE A+A+M +LGLKCRDVRTRE GIQ+IH++++PE+VEL+RRDY AN GWETF
Sbjct: 373 GVEHGNLREHAMAKMKELGLKCRDVRTREVGIQEIHNKVRPEDVELIRRDYTANGGWETF 432
Query: 454 LSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQG 513
+SYED +QDIL+GLLRLRK EL G S+VRELHVYG+ V V R+ K QHQG
Sbjct: 433 ISYEDPKQDILIGLLRLRKISDKAHRAELKGNVSVVRELHVYGSVVSVADRDPKKFQHQG 492
Query: 514 YGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYLE 564
YG+LLMEEAERIA EH S K+AVISGVGTR YYRKLGYEL+GPYM K L+
Sbjct: 493 YGSLLMEEAERIAREEHESDKIAVISGVGTRDYYRKLGYELDGPYMSKTLD 543
>sp|O14023|ELP3_SCHPO Probable elongator complex protein 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=elp3 PE=3 SV=1
Length = 544
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/535 (69%), Positives = 447/535 (83%), Gaps = 3/535 (0%)
Query: 32 RVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETD--REAL 89
+ +A AEIV ++ +N+ ++LNA+K +K+ L+ +P+L ++IAA+P +E+L
Sbjct: 10 KAKACAEIVAELIASENQNKVINLNALKMRISKKHQLSESPRLTDIIAAIPPDAYLKESL 69
Query: 90 LPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEP 149
+ KLRAKPVRTASGIAVVAVM KPHRCPHIA TGN+CVYCPGGPDSDFEYSTQSYTGYEP
Sbjct: 70 MRKLRAKPVRTASGIAVVAVMCKPHRCPHIAMTGNVCVYCPGGPDSDFEYSTQSYTGYEP 129
Query: 150 TSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDA 209
TSMRAIRARY+PY QAR R++QL+ LGH+VDKVE+I+MGGTFMSLP YR FI NLH+A
Sbjct: 130 TSMRAIRARYDPYEQARGRVEQLRSLGHTVDKVEYIIMGGTFMSLPESYRHTFIANLHNA 189
Query: 210 LSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYE 269
LSG T+ +++EAV +SE TKC+G+TIETRPDYCL HL +ML YGCTRLEIGVQS YE
Sbjct: 190 LSGATTEDLDEAVKFSEQSETKCVGITIETRPDYCLDQHLDEMLRYGCTRLEIGVQSVYE 249
Query: 270 DVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRA 329
DVARDTNRGHTV AV + F LAKD G+KVV HMMPDLPNVG+ERD+ F+E+FE+P FR
Sbjct: 250 DVARDTNRGHTVKAVCETFQLAKDTGYKVVTHMMPDLPNVGMERDIFQFQEYFENPAFRT 309
Query: 330 DGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMP 389
DGLK+YPTLVIRGTGLYELWKTGRY+NY P LVD++ARILA+VPPWTR+YR+QRDIPMP
Sbjct: 310 DGLKLYPTLVIRGTGLYELWKTGRYKNYTPNALVDLIARILALVPPWTRIYRIQRDIPMP 369
Query: 390 LVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEG 449
LV+SGVE GNLRELAL RM DLG KCRD+R RE G+Q++HH+I PE+VEL+RRDY AN G
Sbjct: 370 LVSSGVETGNLRELALNRMRDLGTKCRDIRAREVGMQEVHHKIHPEQVELLRRDYTANGG 429
Query: 450 WETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGK-CSIVRELHVYGTAVPVHGREADK 508
WETFLSYED +QDIL+GLLRLR+C PE + S+VRELHVYG+AVPVH R+ K
Sbjct: 430 WETFLSYEDPKQDILIGLLRLRQCSDKTYRPEFTSQPTSLVRELHVYGSAVPVHSRDPKK 489
Query: 509 LQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYL 563
QHQG+GTLL+EEAERIA EH S+K++VISGVG R YY+KLGY L+GPYM K+L
Sbjct: 490 FQHQGFGTLLLEEAERIAKYEHGSKKISVISGVGVRKYYQKLGYTLDGPYMSKWL 544
>sp|Q02908|ELP3_YEAST Elongator complex protein 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ELP3 PE=1 SV=1
Length = 557
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/538 (68%), Positives = 443/538 (82%), Gaps = 4/538 (0%)
Query: 28 EEEARVRAIAEIVNSMVE--LSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETD 85
E+E ++ A+I + + S ++LN + + +KY L + P+L ++I ++P+
Sbjct: 18 EKERFIQCCADITLELTDSLTSGTTREINLNGLITKYSKKYKLKQQPRLTDIINSIPDQY 77
Query: 86 REALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYT 145
++ LLPKL+AKPVRTASGIAVVAVM KPHRCPHIA TGNICVYCPGGPDSDFEYSTQSYT
Sbjct: 78 KKYLLPKLKAKPVRTASGIAVVAVMCKPHRCPHIAYTGNICVYCPGGPDSDFEYSTQSYT 137
Query: 146 GYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRN 205
GYEPTSMRAIRARY+PY QAR R++QLK+LGHS+DKVE++LMGGTFMSLP +YR+ FI
Sbjct: 138 GYEPTSMRAIRARYDPYEQARGRVEQLKQLGHSIDKVEYVLMGGTFMSLPKEYREDFIVK 197
Query: 206 LHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQ 265
LH+ALSG +++EA+ YS+ TKC+G+TIETRPDYC HL ML YGCTRLEIGVQ
Sbjct: 198 LHNALSGFNGNDIDEAILYSQQSLTKCVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQ 257
Query: 266 STYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESP 325
S YEDVARDTNRGHTV +V + F ++KDAG+KVV+HMMPDLPNVG+ERD+E F+E+FE+P
Sbjct: 258 SLYEDVARDTNRGHTVRSVCETFAVSKDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENP 317
Query: 326 LFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRD 385
FR DGLKIYPTLVIRGTGLYELWKTGRY++Y LVD+VARILA+VPPWTR+YRVQRD
Sbjct: 318 DFRTDGLKIYPTLVIRGTGLYELWKTGRYKSYSANALVDLVARILALVPPWTRIYRVQRD 377
Query: 386 IPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYV 445
IPMPLVTSGV+ GNLRELALARM DLG CRDVRTRE GIQ++HH+++P++VEL+RRDY
Sbjct: 378 IPMPLVTSGVDNGNLRELALARMKDLGTTCRDVRTREVGIQEVHHKVQPDQVELIRRDYY 437
Query: 446 ANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMG--KCSIVRELHVYGTAVPVHG 503
AN GWETFLSYED ++DIL+GLLRLRK + T + + SIVRELHVYG+ VP+H
Sbjct: 438 ANGGWETFLSYEDPKKDILIGLLRLRKASKKYTYRKEFTSQRTSIVRELHVYGSVVPLHS 497
Query: 504 READKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVK 561
R+ K QHQG+GTLLMEEAERIA EH S K++VISGVG R+YY KLGYEL+GPYM K
Sbjct: 498 RDPRKFQHQGFGTLLMEEAERIAKEEHGSEKISVISGVGVRNYYGKLGYELDGPYMSK 555
>sp|Q58536|Y1136_METJA Uncharacterized protein MJ1136 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1136 PE=4 SV=1
Length = 541
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/533 (42%), Positives = 328/533 (61%), Gaps = 13/533 (2%)
Query: 39 IVNSMVELSRKNETVD---LNAIKSAACRKYGLARA-PKLVEMIAALPETDREALLPKLR 94
I+ +++ K +T+D + IK+ R + + P E++ E +++ L+P LR
Sbjct: 15 IIERILDEYNKGKTLDKKRIEQIKAECLRIHRIGIGHPSNSEILQYATEEEKKILIPILR 74
Query: 95 AKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRA 154
KPVRT SG+AVVAVM+ P +CPH C++CPGG S F QSYTG EP +MR
Sbjct: 75 KKPVRTISGVAVVAVMTSPEKCPH-----GKCIFCPGGVGSVFGDVPQSYTGREPATMRG 129
Query: 155 IRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHT 214
+ ++PY+Q ++RI+QL+++GH +K+E I+MGGTF + +Y+D+FI+ DA++G
Sbjct: 130 LMFNFDPYLQTKARIEQLEKVGHPTNKIELIIMGGTFPARDIEYQDWFIKRCLDAMNGVD 189
Query: 215 SANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARD 274
++++EEA +E +C+ + IETRPDYC + QML G TR+E+GVQ+ Y ++
Sbjct: 190 ASSLEEAQKINETAEHRCVALCIETRPDYCGEKEINQMLKLGATRVELGVQTIYNEILEF 249
Query: 275 TNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADGLKI 334
RGHTV L KD+G KV H+MP +P +E D + F+E FE+P F+ D +KI
Sbjct: 250 CKRGHTVEDTIKATQLLKDSGLKVSYHLMPGMPGSDMEMDKKMFKEIFENPDFKPDMVKI 309
Query: 335 YPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSG 394
YP LVI GT LYE+WK G Y+ Y E+ ++I++ +++P W R R+QRDIP ++ G
Sbjct: 310 YPCLVIEGTELYEMWKRGEYKPYREEEAIEIISYAKSIMPKWVRTSRIQRDIPATVIVDG 369
Query: 395 VEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKP--EEVELVRRDYVANEGWET 452
V+K NL EL M+ G+KC+ +R RE G I P E ++L R +Y A+ G E
Sbjct: 370 VKKSNLGELVYKYMEKHGIKCKCIRCREVGHVMYKKGIMPDIEHIKLCREEYEASGGTEI 429
Query: 453 FLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREAD-KLQH 511
FLSYED + DIL+ LRLR+ + E+ +VR+LHV G P+ + QH
Sbjct: 430 FLSYEDVKNDILIAFLRLREPYKPFR-KEIDDNTMLVRQLHVCGQEKPLTKDLKEITWQH 488
Query: 512 QGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYLE 564
+GYG L+EEAERIA E +K+ V SG+G R YYRKLGYE G YM KYLE
Sbjct: 489 KGYGRKLLEEAERIAKEEFGKKKILVTSGIGVREYYRKLGYERVGAYMGKYLE 541
>sp|Q57910|Y486_METJA Uncharacterized protein MJ0486 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0486 PE=4 SV=1
Length = 322
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 55/279 (19%)
Query: 116 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRL 175
CPH G C++CP P S++ A+ Q + +++ K+
Sbjct: 50 CPHKKNGG--CIFCPEMG--------------RPISVKYCSAKIPLKEQIKKQMENQKKK 93
Query: 176 GHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVTYSEHGATKCIGM 235
G K GT PA+ ++ + D +++Y E IG+
Sbjct: 94 GFK--KFYIYFYPGTNTYAPAEK----LKEIWDF-----------SLSYKE-----VIGL 131
Query: 236 TIETRPDYCLGPHLRQMLSYGCTR-----LEIGVQSTYEDVARDTNRGHTVAAVADCFCL 290
+I TRPD CL +L+ +++GVQS ++ NRGH V+ +
Sbjct: 132 SIGTRPD-CLEKEKLDILAEYVENGYDIWIDLGVQSMHQKTLEILNRGHDVSDIIKAIKD 190
Query: 291 AKDAGFKVVAHMMPDLPNVGVERDLESFREFFES----PLFRADGLKIYPTLVIRGTGLY 346
G KV H++ LP ES++E E+ L + +KIYP +V++GT L
Sbjct: 191 CHKRGIKVCGHVILGLPG-------ESWKEMMETAKILSLLEIEAVKIYPLVVVKGTKLE 243
Query: 347 ELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRD 385
E++ G YR Q + +V L + P+ + R+ +D
Sbjct: 244 EMYWKGEYRTLDENQYISLVCDFLEHLSPYVLIQRLSKD 282
>sp|P0ADW6|YHCC_ECOLI Uncharacterized protein YhcC OS=Escherichia coli (strain K12)
GN=yhcC PE=4 SV=1
Length = 309
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 7/161 (4%)
Query: 233 IGMTIETRPDYCLGPHLRQMLSYGC----TRLEIGVQSTYEDVARDTNRGHTVAAVADCF 288
+G+ + TRPD L + Y LE+G+Q+ ++ NRGH A
Sbjct: 111 VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTT 170
Query: 289 CLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYEL 348
LA+ G KV +H++ LP G L++ E+ + DG+K++P +++G+ + +
Sbjct: 171 QLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGV---DGIKLHPLHIVKGSIMAKA 227
Query: 349 WKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMP 389
W+ GR E ++ PP +R+ P
Sbjct: 228 WEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRP 268
>sp|P0ADW7|YHCC_ECO57 Uncharacterized protein YhcC OS=Escherichia coli O157:H7 GN=yhcC
PE=4 SV=1
Length = 309
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 7/161 (4%)
Query: 233 IGMTIETRPDYCLGPHLRQMLSYGC----TRLEIGVQSTYEDVARDTNRGHTVAAVADCF 288
+G+ + TRPD L + Y LE+G+Q+ ++ NRGH A
Sbjct: 111 VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTT 170
Query: 289 CLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYEL 348
LA+ G KV +H++ LP G L++ E+ + DG+K++P +++G+ + +
Sbjct: 171 QLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGV---DGIKLHPLHIVKGSIMAKA 227
Query: 349 WKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMP 389
W+ GR E ++ PP +R+ P
Sbjct: 228 WEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRP 268
>sp|O35008|YTQA_BACSU Putative protein YtqA OS=Bacillus subtilis (strain 168) GN=ytqA
PE=3 SV=1
Length = 322
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 233 IGMTIETRPDYCLGPHLRQMLSYGCTR----LEIGVQSTYEDVARDTNRGHTVAAVADCF 288
+G++I TRPD CL + L+ R +E+G+Q+ +E A NR H +
Sbjct: 124 VGISIATRPD-CLPDDVVDYLAELNERTYLWVELGLQTVHERTALLINRAHDFNCYVEGV 182
Query: 289 CLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRAD----GLKIYPTLVIRGTG 344
+ G +V +H++ LP LE E+ AD G+KI+ +++GT
Sbjct: 183 NKLRKHGIRVCSHIINGLP-------LEDRDMMMETAKAVADLDVQGIKIHLLHLLKGTP 235
Query: 345 LYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLV 391
+ + ++ G+ + V +V L ++PP V+R+ D P+ L+
Sbjct: 236 MVKQYEKGKLEFLSQDDYVQLVCDQLEIIPPEMIVHRITGDGPIELM 282
>sp|P54304|HEMN_BACSU Oxygen-independent coproporphyrinogen-III oxidase 1 OS=Bacillus
subtilis (strain 168) GN=hemN PE=2 SV=3
Length = 379
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 6/139 (4%)
Query: 235 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 294
+E PD L+ + G RL GVQ+ +D+ R H V F A++
Sbjct: 91 FAVEANPDDLSAEKLKILKEAGVNRLSFGVQTFEDDLLEKIGRVHKQKDVFTSFERAREI 150
Query: 295 GFKVVA-HMMPDLPNVGVERDLESFREFFESPL-FRADGLKIYPTLVIRGTGLYELWKTG 352
GF+ ++ +M LP + L+ + L A+ +Y +V T Y L + G
Sbjct: 151 GFENISLDLMFGLPG----QTLKHLEHSINTALSLDAEHYSVYSLIVEPKTVFYNLMQKG 206
Query: 353 RYRNYPPEQLVDIVARILA 371
R P EQ ++ +++
Sbjct: 207 RLHLPPQEQEAEMYEIVMS 225
>sp|P43899|Y463_HAEIN Oxygen-independent coproporphyrinogen-III oxidase-like protein
HI_0463 OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=HI_0463 PE=3 SV=1
Length = 383
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 233 IGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAK 292
I +T+E P + +S G R+ +G+QS +D + R H A LAK
Sbjct: 98 IEITLEANPGTVEAERFKGYVSAGIMRISMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAK 157
Query: 293 DAGFKVVA-HMMPDLPNVGVERDLESFREFFE 323
+G K +M LPN +E L+ R+ E
Sbjct: 158 VSGLKSFNLDLMHGLPNQTLEEALDDLRQAIE 189
>sp|Q9HA92|RSAD1_HUMAN Radical S-adenosyl methionine domain-containing protein 1,
mitochondrial OS=Homo sapiens GN=RSAD1 PE=2 SV=2
Length = 442
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 74/196 (37%), Gaps = 20/196 (10%)
Query: 179 VDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVTYSEHGATKCIGMTIE 238
V +VE + GG SL S HT A V EAV + H + +T+E
Sbjct: 88 VQRVESVFFGGGTPSLA---------------SPHTVAAVLEAVAQAAHLPAD-LEVTLE 131
Query: 239 TRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA-GFK 297
P G L + + G RL IG+QS + R R H+ A+ +
Sbjct: 132 ANPTSAPGSRLAEFGAAGVNRLSIGLQSLDDTELRLLGRTHSACDALRTLAEARRLFPGR 191
Query: 298 VVAHMMPDLPNVGVERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNY 357
V +M LP V L +E D L +Y + RGT L+ + G
Sbjct: 192 VSVDLMLGLPAQQVGPWLGQLQELLHHC---DDHLSLYQLSLERGTALFAQVQRGALPAP 248
Query: 358 PPEQLVDIVARILAMV 373
PE ++ R A++
Sbjct: 249 DPELAAEMYQRGRAVL 264
>sp|Q5SUV1|RSAD1_MOUSE Radical S-adenosyl methionine domain-containing protein 1,
mitochondrial OS=Mus musculus GN=Rsad1 PE=2 SV=1
Length = 442
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 22/170 (12%)
Query: 179 VDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVTYSEHGATKCIGMTIE 238
V +VE + GG SL S HT A V EAV + +T+E
Sbjct: 88 VQRVESVFFGGGTPSLA---------------SPHTVAAVLEAVAQEVYLPADS-EVTLE 131
Query: 239 TRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA-GFK 297
P GP L + G RL IG+QS + + R H+ + A+ +
Sbjct: 132 ANPTSAPGPRLAAFGAAGVNRLSIGLQSLDDAELQLLGRTHSASDALRTLAEARLLFPGR 191
Query: 298 VVAHMMPDLPNVGVERDLESFREFFESPLFRADG-LKIYPTLVIRGTGLY 346
V +M LP VE L+ ++ L+ D L +Y + RGT L+
Sbjct: 192 VSVDLMLGLPAQKVEPWLQQLQKL----LYHCDDHLSLYQLTLERGTSLF 237
>sp|A0R0S5|RECO_MYCS2 DNA repair protein RecO OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=recO PE=3 SV=1
Length = 280
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 16/86 (18%)
Query: 113 PHRCPHIATTGNICVYC-PGGP---------------DSDFEYSTQSYTGYEPTSMRAIR 156
PHR H+A G++CV+C P G D D+EY+ S + + I
Sbjct: 164 PHRAFHVAAGGSVCVHCRPSGSSTPPQAVLELMSALHDGDWEYAESSTPPHRSQASGLIA 223
Query: 157 ARYNPYVQARSRIDQLKRLGHSVDKV 182
A +++ + R L G+ VD+
Sbjct: 224 AHLQWHLERQLRTLPLVERGYRVDRT 249
>sp|Q58882|Y1487_METJA Uncharacterized methyltransferase MJ1487 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1487 PE=3 SV=1
Length = 426
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 238 ETRPDYCLGPHLRQMLSYGCTR-LEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGF 296
E RP++ + +L Y + L IG QS E V +RGHTV V + +A+ AG
Sbjct: 271 EVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYNAVRVARKAGL 330
Query: 297 KVVAHMMPDLPNVGVERDLES 317
V + LP E D+E
Sbjct: 331 GVDVDFIFGLPG-ETEEDVEK 350
>sp|B8FI50|PUR7_DESAA Phosphoribosylaminoimidazole-succinocarboxamide synthase
OS=Desulfatibacillum alkenivorans (strain AK-01) GN=purC
PE=3 SV=1
Length = 299
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 406 ARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETF 453
A++D+ +KCR G + +++P+ +E V R Y++ GW ++
Sbjct: 79 AKVDEFPVKCRQYADILEGRSILVKKVQPQAIECVVRGYISGSGWSSY 126
>sp|A4IGH2|RSAD1_DANRE Radical S-adenosyl methionine domain-containing protein 1,
mitochondrial OS=Danio rerio GN=rsad1 PE=2 SV=1
Length = 444
Score = 33.1 bits (74), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 214 TSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVAR 273
T A V E VT + + + +T+E P L+ G R IGVQS D R
Sbjct: 112 TIAAVLETVTKNSN-LSDLAEVTLEVNPTPAGKARLKDFTLAGVNRFSIGVQSLNADHLR 170
Query: 274 DTNRGHTVAAVADCFCLA-KDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADG- 331
R H+V A K +V +M LP + + +++ E L+ D
Sbjct: 171 ILGRDHSVQHALQTVSEARKLCPGRVSVDIMFALPG----QSVSCWQKQLEELLYVCDDH 226
Query: 332 LKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVAR 368
+ +Y + RGT L++ ++G+ + P +++ I+ +
Sbjct: 227 ISLYQLTLERGTQLFKQVESGKL-SVPGDEVTAIMYK 262
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 216,819,021
Number of Sequences: 539616
Number of extensions: 9295002
Number of successful extensions: 20789
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 20753
Number of HSP's gapped (non-prelim): 31
length of query: 564
length of database: 191,569,459
effective HSP length: 123
effective length of query: 441
effective length of database: 125,196,691
effective search space: 55211740731
effective search space used: 55211740731
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)