Your job contains 1 sequence.
>008468
MALLPSLRSVITHQLHHRPPPPPPLLSIASFLFHKPKLRRTTCKNLSFSFSSSSKPITLN
PLATPKDNTLVFKKDERLVADNGESEEKAGTFSTIAAIVTSIGGPPGAVGIVRLSGPMAV
DIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLDRHGNVVDEVLAVPMLAPRSYTRE
DVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISAKS
VAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPPLNLNLVMDKIHAMSQ
DVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEAS
VTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLN
RIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAI
MKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALAL
GQISGEDISEEVLSNIFGKFCIGK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008468
(564 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2029406 - symbol:AT1G78010 species:3702 "Arabi... 1779 2.2e-183 1
TIGR_CMR|BA_5734 - symbol:BA_5734 "tRNA modification GTPa... 787 3.0e-78 1
TIGR_CMR|CHY_0006 - symbol:CHY_0006 "tRNA modification GT... 754 9.3e-75 1
TIGR_CMR|GSU_3465 - symbol:GSU_3465 "tRNA modification GT... 684 2.4e-67 1
TIGR_CMR|CBU_1922 - symbol:CBU_1922 "tRNA modification GT... 601 1.5e-58 1
TIGR_CMR|CPS_5049 - symbol:CPS_5049 "tRNA modification GT... 588 3.6e-57 1
TIGR_CMR|SO_0003 - symbol:SO_0003 "tRNA modification GTPa... 558 5.5e-54 1
UNIPROTKB|Q9KVY5 - symbol:mnmE "tRNA modification GTPase ... 555 1.1e-53 1
TIGR_CMR|VC_0003 - symbol:VC_0003 "thiophene and furan ox... 555 1.1e-53 1
UNIPROTKB|P25522 - symbol:mnmE "GTP-binding protein with ... 548 6.3e-53 1
TIGR_CMR|ECH_0060 - symbol:ECH_0060 "tRNA modification GT... 422 5.3e-49 2
TIGR_CMR|CJE_1036 - symbol:CJE_1036 "tRNA modification GT... 442 1.4e-48 2
TIGR_CMR|SPO_3895 - symbol:SPO_3895 "tRNA modification GT... 425 9.8e-48 2
WB|WBGene00009557 - symbol:F39B2.7 species:6239 "Caenorha... 399 1.4e-42 2
UNIPROTKB|P75104 - symbol:mnmE "tRNA modification GTPase ... 404 1.8e-42 2
POMBASE|SPAC222.05c - symbol:mss1 "mitochondrial GTPase (... 448 2.5e-42 1
TIGR_CMR|NSE_0717 - symbol:NSE_0717 "tRNA modification GT... 447 3.2e-42 1
SGD|S000004625 - symbol:MSS1 "Mitochondrial protein" spec... 434 7.5e-41 1
TIGR_CMR|APH_1288 - symbol:APH_1288 "tRNA modification GT... 429 2.6e-40 1
CGD|CAL0004408 - symbol:orf19.2042 species:5476 "Candida ... 423 1.1e-39 1
UNIPROTKB|Q969Y2 - symbol:GTPBP3 "tRNA modification GTPas... 421 1.8e-39 1
UNIPROTKB|E1BH64 - symbol:E1BH64 "Uncharacterized protein... 410 2.6e-38 1
RGD|1305367 - symbol:Gtpbp3 "GTP binding protein 3" speci... 407 5.5e-38 1
ZFIN|ZDB-GENE-050522-335 - symbol:gtpbp3 "GTP binding pro... 402 1.9e-37 1
DICTYBASE|DDB_G0270228 - symbol:gtpbp3 "GTP-binding prote... 367 4.2e-37 2
MGI|MGI:1917609 - symbol:Gtpbp3 "GTP binding protein 3" s... 392 2.1e-36 1
FB|FBgn0039189 - symbol:CG18528 species:7227 "Drosophila ... 384 1.5e-35 1
UNIPROTKB|E2RE04 - symbol:GTPBP3 "Uncharacterized protein... 361 4.4e-33 1
ASPGD|ASPL0000007078 - symbol:AN6522 species:162425 "Emer... 334 9.0e-32 2
TIGR_CMR|CHY_1919 - symbol:CHY_1919 "GTP-binding protein"... 226 7.3e-16 1
UNIPROTKB|Q83C83 - symbol:der "GTPase Der" species:227377... 216 1.0e-14 1
TIGR_CMR|CBU_1245 - symbol:CBU_1245 "GTP-binding protein"... 216 1.0e-14 1
UNIPROTKB|Q3Z6P5 - symbol:der "GTPase Der" species:243164... 204 2.2e-13 1
TIGR_CMR|DET_1395 - symbol:DET_1395 "GTP-binding protein"... 204 2.2e-13 1
TAIR|locus:2099277 - symbol:emb2738 "embryo defective 273... 205 4.0e-13 1
DICTYBASE|DDB_G0279259 - symbol:DDB_G0279259 "putative GT... 206 4.5e-13 1
UNIPROTKB|Q8EC36 - symbol:der "GTPase Der" species:211586... 191 7.8e-12 1
TIGR_CMR|SO_3308 - symbol:SO_3308 "GTP-binding protein En... 191 7.8e-12 1
TIGR_CMR|CJE_0435 - symbol:CJE_0435 "GTPase family protei... 190 8.8e-12 1
UNIPROTKB|P0A6P5 - symbol:der "50S ribosomal subunit stab... 189 1.3e-11 1
TIGR_CMR|CPS_4121 - symbol:CPS_4121 "GTP-binding protein ... 183 1.4e-11 1
UNIPROTKB|Q81SW9 - symbol:der "GTPase Der" species:1392 "... 187 1.7e-11 1
TIGR_CMR|BA_1525 - symbol:BA_1525 "GTPase family protein"... 187 1.7e-11 1
UNIPROTKB|Q47WC5 - symbol:der "GTPase Der" species:167879... 188 1.7e-11 1
TIGR_CMR|CPS_4247 - symbol:CPS_4247 "GTP-binding protein ... 188 1.7e-11 1
UNIPROTKB|Q2GDM7 - symbol:NSE_0536 "GTPase Der" species:2... 184 4.3e-11 1
TIGR_CMR|NSE_0536 - symbol:NSE_0536 "putative GTP-binding... 184 4.3e-11 1
UNIPROTKB|Q74AX4 - symbol:der "GTPase Der" species:243231... 179 1.3e-10 1
TIGR_CMR|GSU_2225 - symbol:GSU_2225 "GTP-binding protein ... 179 1.3e-10 1
UNIPROTKB|Q9KTW7 - symbol:der "GTPase Der" species:243277... 177 2.8e-10 1
TIGR_CMR|VC_0763 - symbol:VC_0763 "GTP-binding protein" s... 177 2.8e-10 1
UNIPROTKB|Q2GKV6 - symbol:der "GTPase Der" species:212042... 175 3.7e-10 1
TIGR_CMR|APH_0390 - symbol:APH_0390 "putative GTP-binding... 175 3.7e-10 1
UNIPROTKB|Q5LR04 - symbol:der "GTPase Der" species:246200... 172 9.7e-10 1
TIGR_CMR|SPO_2328 - symbol:SPO_2328 "GTP-binding protein ... 172 9.7e-10 1
UNIPROTKB|P64057 - symbol:der "GTPase Der" species:1773 "... 164 6.7e-09 1
UNIPROTKB|Q2GGW4 - symbol:engA "GTPase Der" species:20592... 163 8.0e-09 1
TIGR_CMR|ECH_0504 - symbol:ECH_0504 "GTP-binding protein ... 163 8.0e-09 1
TIGR_CMR|BA_4524 - symbol:BA_4524 "GTP-binding protein Er... 159 8.3e-09 1
TAIR|locus:2154915 - symbol:AT5G66470 species:3702 "Arabi... 162 9.5e-09 1
UNIPROTKB|Q8EH80 - symbol:era "GTPase Era" species:211586... 158 1.5e-08 1
TIGR_CMR|SO_1349 - symbol:SO_1349 "GTP-binding protein Er... 158 1.5e-08 1
UNIPROTKB|Q8EAH6 - symbol:hydF "Fe hydrogenase maturation... 159 1.7e-08 1
TIGR_CMR|SO_3926 - symbol:SO_3926 "GTP-binding protein" s... 159 1.7e-08 1
TIGR_CMR|CHY_0430 - symbol:CHY_0430 "GTP-binding protein ... 156 1.8e-08 1
UNIPROTKB|P37214 - symbol:era "GTPase Era" species:210007... 153 3.9e-08 1
UNIPROTKB|P06616 - symbol:era "GTP-binding protein" speci... 151 6.8e-08 1
TIGR_CMR|CBU_1502 - symbol:CBU_1502 "GTP-binding protein ... 147 1.8e-07 1
UNIPROTKB|Q74AX3 - symbol:era "GTPase Era" species:243231... 144 4.1e-07 1
TIGR_CMR|GSU_2226 - symbol:GSU_2226 "GTP-binding protein ... 144 4.1e-07 1
GENEDB_PFALCIPARUM|PFL0835w - symbol:PFL0835w "GTP-bindin... 151 4.7e-07 1
UNIPROTKB|Q8I5N5 - symbol:PFL0835w "GTP binding protein, ... 151 4.7e-07 1
UNIPROTKB|Q3ABV4 - symbol:CHY_1548 "GTP-binding protein" ... 144 8.1e-07 1
TIGR_CMR|CHY_1548 - symbol:CHY_1548 "GTP-binding protein"... 144 8.1e-07 1
TIGR_CMR|NSE_0959 - symbol:NSE_0959 "GTP-binding protein ... 141 9.8e-07 1
TIGR_CMR|ECH_0476 - symbol:ECH_0476 "GTP-binding protein ... 136 3.2e-06 1
TIGR_CMR|SPO_0691 - symbol:SPO_0691 "GTP-binding protein ... 135 4.4e-06 1
UNIPROTKB|O33230 - symbol:hflX "GTPase HflX" species:1773... 137 7.1e-06 1
TIGR_CMR|CJE_0763 - symbol:CJE_0763 "GTP-binding protein ... 131 1.1e-05 1
TIGR_CMR|APH_0350 - symbol:APH_0350 "GTP-binding protein ... 131 1.3e-05 1
UNIPROTKB|Q9KPB3 - symbol:era "GTPase Era" species:243277... 131 1.5e-05 1
TIGR_CMR|VC_2460 - symbol:VC_2460 "GTP-binding protein Er... 131 1.5e-05 1
UNIPROTKB|Q5SM23 - symbol:era "GTPase Era" species:300852... 123 9.8e-05 1
DICTYBASE|DDB_G0288609 - symbol:eral1 "GTP-binding protei... 125 0.00010 1
UNIPROTKB|P0A562 - symbol:era "GTPase Era" species:1773 "... 122 0.00013 1
MGI|MGI:1889295 - symbol:Eral1 "Era (G-protein)-like 1 (E... 123 0.00020 1
ZFIN|ZDB-GENE-060526-84 - symbol:eral1 "Era G-protein-lik... 121 0.00045 2
UNIPROTKB|O75628 - symbol:REM1 "GTP-binding protein REM 1... 117 0.00045 1
TIGR_CMR|SPO_0061 - symbol:SPO_0061 "translation initiati... 123 0.00049 1
RGD|1304714 - symbol:Eral1 "Era (G-protein)-like 1 (E. co... 119 0.00054 1
UNIPROTKB|J3QSB2 - symbol:ERAL1 "GTPase Era, mitochondria... 118 0.00054 2
UNIPROTKB|P25519 - symbol:hflX species:83333 "Escherichia... 118 0.00067 1
UNIPROTKB|O75616 - symbol:ERAL1 "GTPase Era, mitochondria... 118 0.00070 1
UNIPROTKB|A5PK43 - symbol:ERAL1 "GTPase Era, mitochondria... 117 0.00090 1
UNIPROTKB|I3L5J7 - symbol:LOC100623430 "Uncharacterized p... 114 0.00091 1
>TAIR|locus:2029406 [details] [associations]
symbol:AT1G78010 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006897 "endocytosis" evidence=RCA]
HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0007264 GO:GO:0003924 GO:GO:0005622
GO:GO:0006400 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HOGENOM:HOG000200713 OMA:IDFPEEV EMBL:BT015351 EMBL:BT015722
IPI:IPI00546429 RefSeq:NP_177924.3 UniGene:At.21626
ProteinModelPortal:Q66GQ1 SMR:Q66GQ1 STRING:Q66GQ1 PaxDb:Q66GQ1
PRIDE:Q66GQ1 EnsemblPlants:AT1G78010.1 GeneID:844136
KEGG:ath:AT1G78010 TAIR:At1g78010 InParanoid:Q66GQ1
PhylomeDB:Q66GQ1 ProtClustDB:CLSN2680810 Genevestigator:Q66GQ1
Uniprot:Q66GQ1
Length = 560
Score = 1779 (631.3 bits), Expect = 2.2e-183, P = 2.2e-183
Identities = 367/541 (67%), Positives = 426/541 (78%)
Query: 37 KLRRTTCKNLXXXXXXXX-KPITLNPLA-TPKDNTLVFKKDERLVADNG----ESEEKAG 90
++ R KNL K L P A + ++N+LVFK DER+V G ++ +K
Sbjct: 27 RISRPISKNLCFVLFSSSPKTSLLKPRAQSSENNSLVFKGDERVVGLVGKVVDDAFDKVD 86
Query: 91 TF---STIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTS 147
F STI AIVT IGGPPGAVGIVRLSGP AV++ RVF+ WRP S
Sbjct: 87 RFQSSSTIVAIVTPIGGPPGAVGIVRLSGPKAVEVARRVFRSAKKTKKKESDSDTWRPKS 146
Query: 148 HVVEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGAT 207
H VEYG V+D +GNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLR C+EAGA
Sbjct: 147 HFVEYGAVVDSNGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRTCVEAGAR 206
Query: 208 LAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCI 267
LA+PGEFTLRAFLNGRLDLSQAENVEKLIS GIQGGFSSLV S+RA+CI
Sbjct: 207 LAEPGEFTLRAFLNGRLDLSQAENVEKLISAKSSAAADAALEGIQGGFSSLVKSLRAQCI 266
Query: 268 ELLTEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRP 327
ELLTEIEARLDF+DEMPPL++ V++KI +MSQDVE+AL+TANYDKLLQSGLQIAIVGRP
Sbjct: 267 ELLTEIEARLDFEDEMPPLDIESVINKITSMSQDVESALDTANYDKLLQSGLQIAIVGRP 326
Query: 328 NVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIG 387
NVGKSSLLNAWSKSERAIVTE+AGTTRDV+EA+VTV GVP+TLLDTAGIRET+DIVEKIG
Sbjct: 327 NVGKSSLLNAWSKSERAIVTEVAGTTRDVVEANVTVRGVPITLLDTAGIRETNDIVEKIG 386
Query: 388 VERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPS 447
VERSE A ADVIIM VSAV+GWT ED+ELL +IQS+K PMILV+NKIDCAP
Sbjct: 387 VERSETAAKVADVIIMAVSAVEGWTEEDTELLRKIQSDK-------PMILVMNKIDCAPP 439
Query: 448 AS----NEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQC 503
S + K F+ VFT AVTGQGI++LE AI++I+GL ++P GG +W VNQRQC
Sbjct: 440 GSCDQLEDQRKKEEVFHKSVFTSAVTGQGIEELEDAILEILGLDRVPTGGHQWTVNQRQC 499
Query: 504 EQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIG 563
EQL+RTKEALVRL+ +IE+E+P+DFWTI+LR+AAL+L QISG+D+SEEVLS+IF KFCIG
Sbjct: 500 EQLVRTKEALVRLREAIEDEIPIDFWTIELREAALSLAQISGQDVSEEVLSSIFAKFCIG 559
Query: 564 K 564
K
Sbjct: 560 K 560
>TIGR_CMR|BA_5734 [details] [associations]
symbol:BA_5734 "tRNA modification GTPase TrmE"
species:198094 "Bacillus anthracis str. Ames" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291
RefSeq:NP_847879.1 RefSeq:YP_031574.1 RefSeq:YP_052661.1
ProteinModelPortal:Q81JD9 DNASU:1085503
EnsemblBacteria:EBBACT00000010687 EnsemblBacteria:EBBACT00000014942
EnsemblBacteria:EBBACT00000021840 GeneID:1085503 GeneID:2820766
GeneID:2848296 KEGG:ban:BA_5734 KEGG:bar:GBAA_5734 KEGG:bat:BAS5337
HOGENOM:HOG000200713 OMA:IDFPEEV
BioCyc:BANT260799:GJAJ-5414-MONOMER
BioCyc:BANT261594:GJ7F-5590-MONOMER Uniprot:Q81JD9
Length = 458
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 184/477 (38%), Positives = 277/477 (58%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVE 151
F TIAAI T++G GA+ IVR+SG AV+ V R+FK P SH +
Sbjct: 3 FDTIAAISTALG--EGAIAIVRVSGDDAVEKVNRIFKGKDLTEV---------P-SHTIH 50
Query: 152 YGVVLDRHGN-VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D N V++EV+ M APR++TRE++VE+ CHG V + +VL+ L G LA+
Sbjct: 51 YGHIVDLDTNQVIEEVMVSIMRAPRTFTRENIVEINCHGGLVSVNKVLQLILAQGVRLAE 110
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI ++G S L+ +R +E L
Sbjct: 111 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAINQMEGRLSKLIGRLRQDILETL 170
Query: 271 TEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+E +D+ D++ + N++++K + ++ LET+ K+L+ G+ AI+GRPN
Sbjct: 171 AHVEVNIDYPEYDDVEEMTHNILIEKATHVRAEIAKILETSKQGKILREGIATAIIGRPN 230
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ + ++AIVT+IAGTTRDVIE V V GVP+ L+DTAGIRET+D+VE+IGV
Sbjct: 231 VGKSSLLNSLVQEKKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDVVERIGV 290
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS+ + AD++++ V+ + T+ED EL +Q I+++NK D P A
Sbjct: 291 ERSKEMMSQADLVLVVVNYSETLTNEDEELFRAVQGKD--------FIVIVNKTDL-PQA 341
Query: 449 SNEWNKVGNSFNDHVFTCA-VTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLM 507
+ + + + V T + + QGI +LE AI + I + + N R L
Sbjct: 342 IDMERVIELAAGNRVITTSLIEEQGIDELEKAIADLFFEGTIDSADVTYVSNARHIGLLT 401
Query: 508 RTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ + + +IE +P+D IDL LG+I+G+ + E ++ +F +FC+GK
Sbjct: 402 QAGKTIGDAIEAIENGVPIDMVQIDLTRTWEILGEITGDTVHESLIDQLFSQFCLGK 458
>TIGR_CMR|CHY_0006 [details] [associations]
symbol:CHY_0006 "tRNA modification GTPase TrmE"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0006400 "tRNA
modification" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 HSSP:Q9WYA4
OMA:PGEFSEQ HOGENOM:HOG000200713 RefSeq:YP_358878.1
ProteinModelPortal:Q3AG56 STRING:Q3AG56 GeneID:3727714
KEGG:chy:CHY_0006 PATRIC:21273213 BioCyc:CHYD246194:GJCN-6-MONOMER
Uniprot:Q3AG56
Length = 461
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 183/474 (38%), Positives = 258/474 (54%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEYG 153
TIAAI T +G G +GIVR+SGP A++ V VF P + S + YG
Sbjct: 5 TIAAISTPLG--EGGIGIVRVSGPGAIEAVKNVFIPRQSKDLS-------KVPSFTLHYG 55
Query: 154 VVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPG 212
++D G +VDEVL M AP+SYT EDVVE+ CHG V + +VL L+ G LA+PG
Sbjct: 56 KIVDPADGKIVDEVLVSVMRAPKSYTGEDVVEINCHGGIVAVEKVLELILKQGIRLAEPG 115
Query: 213 EFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTE 272
EFT RAFLNGR+DLSQAE V +I + G + +VR K I +L
Sbjct: 116 EFTKRAFLNGRIDLSQAEAVIDIIRAKTEASLKLAGRQLSGELREKINAVRQKIINILAF 175
Query: 273 IEARLDFDD-EMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGK 331
IE +D+ + E + + I + DV L + ++L+ G+ I G+PNVGK
Sbjct: 176 IEVSIDYPEYEFDEVTPETALKNIDEIINDVRRLLSSYERGRILREGITAVIAGKPNVGK 235
Query: 332 SSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERS 391
SSLLNA + +RAIVT+I GTTRDVIE + + G+PV ++DTAGIRET+D+VEK+GVE++
Sbjct: 236 SSLLNALLRKKRAIVTDIPGTTRDVIEDYLNLKGIPVKIVDTAGIRETEDLVEKLGVEKT 295
Query: 392 EAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASN- 450
ADV + V G +D ++L+ I +K +LVINKID N
Sbjct: 296 REYLNQADVTLFVVDVSIGIDEDDEKILSLINKDKS--------LLVINKIDLLQGKVNF 347
Query: 451 EWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTK 510
E V + V A +G++ LE + +I+ Q G N R L +
Sbjct: 348 EQYAVKTGIKNFVPFSARNFEGLEILENKLYEILIPEQEGEGESALISNLRHKNYLEKAL 407
Query: 511 EALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+L+ K SI P+D IDL +A LG I+G+ + +E+++ IF +FC+GK
Sbjct: 408 NSLLSAKESIASGEPVDLVAIDLNEALRELGAITGDALGDEIINEIFSQFCVGK 461
>TIGR_CMR|GSU_3465 [details] [associations]
symbol:GSU_3465 "tRNA modification GTPase TrmE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:NP_954505.1 ProteinModelPortal:Q746Q3
GeneID:2686588 KEGG:gsu:GSU3465 PATRIC:22029787
BioCyc:GSUL243231:GH27-3432-MONOMER Uniprot:Q746Q3
Length = 456
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 176/475 (37%), Positives = 259/475 (54%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEYG 153
TIAAI T+ G G VGIVR+SGP A I RVF+ SH YG
Sbjct: 6 TIAAISTAAG--EGGVGIVRVSGPDAPSIARRVFRRGSNGDFE----------SHRFYYG 53
Query: 154 VVLDR-HGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPG 212
V+D G VDE +AV M+ PRSYTREDV+E+QCHG + RRVL L AGA LA+PG
Sbjct: 54 SVVDAVTGEAVDEAMAVLMVRPRSYTREDVLEIQCHGGYLVTRRVLELVLAAGARLAEPG 113
Query: 213 EFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTE 272
EFT RAFLNGR+DL QAE V +I QG S + +V A+ + L
Sbjct: 114 EFTRRAFLNGRIDLVQAEAVIDVIRAKTDAALALAQHQRQGRLSQRLDTVMAELRQALAL 173
Query: 273 IEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGK 331
+EA +DF +D++ P + + + ++ V + + ++L+ G+ + I G+PNVGK
Sbjct: 174 VEAFIDFPEDDIDPAAQDALTVHVRKAAETVGELIAGFDEGRVLREGVAVLIAGKPNVGK 233
Query: 332 SSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERS 391
SSLLN + +RAIVT + GTTRD+IE V + G+P+ ++DTAGIR+T+DIVEK GV +
Sbjct: 234 SSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGIRDTEDIVEKEGVRLT 293
Query: 392 EAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNE 451
AD++++ + +D +L+ + + +ILV NK D P A
Sbjct: 294 LEKIPEADLVLLVIDGSRPLDEDDRMILSALAGKR--------LILVENKCDL-PRAVQI 344
Query: 452 WNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRW-AVNQ-RQCEQLMRT 509
+++ V G GI +L+ +I + +H R + AV++ R + L R+
Sbjct: 345 PDEL--VLMPRVTVSTSRGDGIDELKESIFQTF-IHGAAIDSREYVAVSRVRHRDLLSRS 401
Query: 510 KEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
L + + L+ ++LRDA A+G+++GE +++L IF +FCIGK
Sbjct: 402 TMHLTAFEQGLASGFTLELLAVELRDALAAVGEVTGETTPDDILDVIFDRFCIGK 456
>TIGR_CMR|CBU_1922 [details] [associations]
symbol:CBU_1922 "tRNA modification GTPase TrmE"
species:227377 "Coxiella burnetii RSA 493" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0003924
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006400
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ ProtClustDB:PRK05291 EMBL:Y10436 RefSeq:NP_820899.1
ProteinModelPortal:P94612 GeneID:1209835 KEGG:cbu:CBU_1922
PATRIC:17932577 BioCyc:CBUR227377:GJ7S-1896-MONOMER Uniprot:P94612
Length = 452
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 159/473 (33%), Positives = 245/473 (51%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEYG 153
TIAA T G G +G+VR+SG I ++ V P +
Sbjct: 8 TIAAQATPSGR--GGIGVVRVSGEKTKAIAQKILGCV--------------PKPRYATFV 51
Query: 154 VVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGE 213
D G+V+DE +A+ P S+T EDV+EL HG V + R+L L+AGA A+PGE
Sbjct: 52 KFRDS-GSVIDEGIALYFPKPNSFTGEDVLELHGHGGPVVMDRLLNTVLKAGARQARPGE 110
Query: 214 FTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEI 273
F+ RAFLN ++DL+QAE V LI+ +QG FS + + I+L I
Sbjct: 111 FSERAFLNNKIDLAQAEAVADLINASSEQAARSAMRSLQGEFSKRIHQLVDALIQLRMYI 170
Query: 274 EARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKS 332
EA +DF ++E+ L + + + ++ V+ +TA LL+ G+ + I G PNVGKS
Sbjct: 171 EASIDFPEEEIDFLADERIKETLENLTHQVQEIEKTAKQGALLREGITVVIAGEPNVGKS 230
Query: 333 SLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSE 392
SLLN S E AIVT+IAGTTRD+I S+ + G+P+ ++DTAG+R T+D+VEK GV R++
Sbjct: 231 SLLNLLSGQETAIVTDIAGTTRDIIRESIHIDGLPIHVVDTAGLRLTEDVVEKEGVRRTQ 290
Query: 393 AVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKS-TESSTPMILVINKIDCAPSASNE 451
AD++++ + A S+ +E +I + S ++ P ++V NKID A +
Sbjct: 291 KAVQQADLLLLMIDA-----SKPTEDFKKIIAQWFSENDNKIPTLIVENKIDLIGEAPRK 345
Query: 452 WNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKE 511
NK H+ T G++ L+ + G + +R C+ + R
Sbjct: 346 ENKE----YPHIKLSVKTRAGVELLKNHLKNTAGFEATHENN--FIARRRHCDAIARASA 399
Query: 512 ALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
L + + + + DL+ A AL +I+GE S+++L IF +FCIGK
Sbjct: 400 FLKNANNHLLNQKAGELVAEDLKLAQNALSEITGEFTSDDLLGKIFSEFCIGK 452
>TIGR_CMR|CPS_5049 [details] [associations]
symbol:CPS_5049 "tRNA modification GTPase TrmE"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HSSP:Q9WYA4 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_271687.1
ProteinModelPortal:Q47U36 SMR:Q47U36 STRING:Q47U36 GeneID:3518638
KEGG:cps:CPS_5049 PATRIC:21472877
BioCyc:CPSY167879:GI48-5049-MONOMER Uniprot:Q47U36
Length = 471
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 157/482 (32%), Positives = 249/482 (51%)
Query: 93 STIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEY 152
+TIAA T+ G G VGI+R+SGP A ++ + + P EY
Sbjct: 8 TTIAAQATAPGR--GGVGIIRVSGPEAKNVAQAILGKL--------------PEVRKAEY 51
Query: 153 GVVLDRHGN----VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACL-EAGAT 207
LD V+D+ +A+ AP S+T EDV+E Q HG V L +L+ L +
Sbjct: 52 LPFLDCTSTDKTQVLDQGIALYFKAPNSFTGEDVIEFQGHGGPVILDMLLKVILAQPKVI 111
Query: 208 LAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCI 267
+A+PGEF+ +AFLN +LDL+QAE + LI+ +QG FS LV + I
Sbjct: 112 MAKPGEFSEQAFLNDKLDLTQAEAIADLINSSSEQAARSALHSLQGDFSKLVNEMVESII 171
Query: 268 ELLTEIEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGR 326
L +EA +DF ++E+ L ++ + A+ VE+ + A +++ G+++ I GR
Sbjct: 172 HLRMYVEAAIDFPEEEIDFLADKKIVTDLKAIISRVEDVRKQAQQGSIIREGMRVVIAGR 231
Query: 327 PNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKI 386
PN GKSSLLNA S + AIVT+IAGTTRDV+ + + G+P+ ++DTAG+R++DD+VEKI
Sbjct: 232 PNAGKSSLLNALSGKQTAIVTDIAGTTRDVLAEQIHIDGMPLHIIDTAGLRDSDDVVEKI 291
Query: 387 GVERSEAVALGADVIIMTVSAVDGWT--SEDSELLNRIQSNKKSTESSTPMILVINKIDC 444
G+ER+ AD +++ V A + + +D ++ + + L+ NK D
Sbjct: 292 GIERAWQEINQADRVLLMVDASEDHSILEDDQDIKDFYPEFFAKLPEKIGLTLIRNKADV 351
Query: 445 --APSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQ 502
A + E+ + + + A TG+G+ L+ + I+G GG + +R
Sbjct: 352 NDAKTGFTEFTDTDGTQHAIITLSAKTGKGVDSLKEHLKTIMGYQGGTEGG--FMARRRH 409
Query: 503 CEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCI 562
L T + L+ +E + + +LR L QI+GE S+++L IF FCI
Sbjct: 410 LVALENTHQHLLTGLDQLESYVAGEILAEELRICQQELDQITGEFTSDDLLGKIFSSFCI 469
Query: 563 GK 564
GK
Sbjct: 470 GK 471
>TIGR_CMR|SO_0003 [details] [associations]
symbol:SO_0003 "tRNA modification GTPase TrmE"
species:211586 "Shewanella oneidensis MR-1" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0008175 "tRNA methyltransferase
activity" evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 RefSeq:NP_715645.2 ProteinModelPortal:Q8CX52
GeneID:1167901 KEGG:son:SO_0003 PATRIC:23519697 Uniprot:Q8CX52
Length = 453
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 159/482 (32%), Positives = 245/482 (50%)
Query: 91 TFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVV 150
T TI A T+ G G VGI+R+SG A ++ V + P
Sbjct: 2 TTDTIVAQATAPGR--GGVGIIRISGDKATNVAMAVLGHL--------------PKPRYA 45
Query: 151 EYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA-GATLA 209
+Y G V+D+ +A+ P S+T EDV+ELQ HG ++ L +++ LE G +A
Sbjct: 46 DYCYFKSASGQVIDQGIALFFKGPNSFTGEDVLELQGHGGQIVLDMLIKRVLEVEGIRIA 105
Query: 210 QPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIEL 269
+PGEF+ +AF+N +LDL+QAE + LI +QG FS V + + L
Sbjct: 106 KPGEFSEQAFMNDKLDLTQAEAIADLIDATSEQAAKSALQSLQGEFSKEVHELVDQVTHL 165
Query: 270 LTEIEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+EA +DF D+E+ L+ + + ++ + + +A +++ G+++ I GRPN
Sbjct: 166 RLYVEAAIDFPDEEVDFLSDGKIANALYKIIDKLIAVQASAKQGSIIREGMKVVIAGRPN 225
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
GKSSLLNA + E AIVTEIAGTTRDV+ + + G+P+ ++DTAG+R+T D VE+IG+
Sbjct: 226 AGKSSLLNALAGKESAIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDTVEQIGI 285
Query: 389 ERSEAVALGAD-VIIM----TVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKID 443
ER+ AD V+ M T +AVD + +NR+ +N T ++ NK D
Sbjct: 286 ERAWNEINSADRVLFMVDGTTTTAVDPHDIWP-DFINRLPTNLGVT-------VIRNKAD 337
Query: 444 CAPSASNEWNKVGNSFNDHVFTC-AVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQ 502
+ G S V+ A TG G+ +L+ + ++G GG + +R
Sbjct: 338 LTGENLEMTEEKGYS----VYRISAKTGLGVDELKQHLKSLMGYQSNLEGG--FIARRRH 391
Query: 503 CEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCI 562
E L L K +E L + +LR A LAL +I+G S+++L IF FCI
Sbjct: 392 LEALEIAASHLQLGKEQLEVYLAGELLAEELRMAQLALSEITGRFTSDDLLGKIFSSFCI 451
Query: 563 GK 564
GK
Sbjct: 452 GK 453
>UNIPROTKB|Q9KVY5 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 155/476 (32%), Positives = 237/476 (49%)
Query: 91 TFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVV 150
T TI A T+ G G VGI+R+SGP+A + V RP
Sbjct: 2 TTDTIVAQATAPGR--GGVGIIRVSGPLAAHVAQTV------------TGRTLRP--RYA 45
Query: 151 EYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA-GATLA 209
EY D G +D+ +A+ P S+T EDV+ELQ HG V + ++R L+ G A
Sbjct: 46 EYLPFTDEDGQQLDQGIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPA 105
Query: 210 QPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIEL 269
+PGEF+ RAFLN ++DL+QAE + LI +QG FS + ++ I L
Sbjct: 106 RPGEFSERAFLNDKMDLTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHL 165
Query: 270 LTEIEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+EA +DF ++E+ L V + + ++ AN +++ G+++ I GRPN
Sbjct: 166 RIYVEAAIDFPEEEIDFLADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPN 225
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
GKSSLLNA S E AIVT+IAGTTRDV+ + + G+P+ ++DTAG+R+ D VEKIG+
Sbjct: 226 AGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGI 285
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ER+ AD ++ V DG T+E ++ + + + ++ NK D
Sbjct: 286 ERAWEEIRQADRVLFMV---DGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEP 342
Query: 449 SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMR 508
+ + + A TGQG+ L + + +G GG + +R + L R
Sbjct: 343 LGICHVNQPTL---IRLSAKTGQGVDALRQHLKECMGFSGNQEGG--FMARRRHLDALER 397
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
E L + +E + + +LR A L +I+GE S+++L IF FCIGK
Sbjct: 398 AAEHLAIGQQQLEGYMAGEILAEELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK 453
>TIGR_CMR|VC_0003 [details] [associations]
symbol:VC_0003 "thiophene and furan oxidation protein ThdF"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 155/476 (32%), Positives = 237/476 (49%)
Query: 91 TFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVV 150
T TI A T+ G G VGI+R+SGP+A + V RP
Sbjct: 2 TTDTIVAQATAPGR--GGVGIIRVSGPLAAHVAQTV------------TGRTLRP--RYA 45
Query: 151 EYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA-GATLA 209
EY D G +D+ +A+ P S+T EDV+ELQ HG V + ++R L+ G A
Sbjct: 46 EYLPFTDEDGQQLDQGIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPA 105
Query: 210 QPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIEL 269
+PGEF+ RAFLN ++DL+QAE + LI +QG FS + ++ I L
Sbjct: 106 RPGEFSERAFLNDKMDLTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHL 165
Query: 270 LTEIEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+EA +DF ++E+ L V + + ++ AN +++ G+++ I GRPN
Sbjct: 166 RIYVEAAIDFPEEEIDFLADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPN 225
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
GKSSLLNA S E AIVT+IAGTTRDV+ + + G+P+ ++DTAG+R+ D VEKIG+
Sbjct: 226 AGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGI 285
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ER+ AD ++ V DG T+E ++ + + + ++ NK D
Sbjct: 286 ERAWEEIRQADRVLFMV---DGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEP 342
Query: 449 SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMR 508
+ + + A TGQG+ L + + +G GG + +R + L R
Sbjct: 343 LGICHVNQPTL---IRLSAKTGQGVDALRQHLKECMGFSGNQEGG--FMARRRHLDALER 397
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
E L + +E + + +LR A L +I+GE S+++L IF FCIGK
Sbjct: 398 AAEHLAIGQQQLEGYMAGEILAEELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK 453
>UNIPROTKB|P25522 [details] [associations]
symbol:mnmE "GTP-binding protein with a role in
modification of tRNA" species:83333 "Escherichia coli K-12"
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009268 "response to pH" evidence=IMP] [GO:0030488 "tRNA
methylation" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IEA;IDA] [GO:0005525 "GTP binding" evidence=IEA;IDA]
[GO:0006805 "xenobiotic metabolic process" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0016020 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0003924 GO:GO:0009268
GO:GO:0006805 EMBL:L10328 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
EMBL:S57109 PIR:A38160 PIR:C65173 RefSeq:NP_418162.1
RefSeq:YP_491728.1 PDB:1RFL PDB:2GJ8 PDB:2GJ9 PDB:2GJA PDBsum:1RFL
PDBsum:2GJ8 PDBsum:2GJ9 PDBsum:2GJA ProteinModelPortal:P25522
SMR:P25522 DIP:DIP-11033N IntAct:P25522 PRIDE:P25522
EnsemblBacteria:EBESCT00000002643 EnsemblBacteria:EBESCT00000017912
GeneID:12932528 GeneID:948222 KEGG:ecj:Y75_p3466 KEGG:eco:b3706
PATRIC:32122909 EchoBASE:EB0990 EcoGene:EG10997
BioCyc:EcoCyc:EG10997-MONOMER BioCyc:ECOL316407:JW3684-MONOMER
EvolutionaryTrace:P25522 Genevestigator:P25522 GO:GO:0030488
Uniprot:P25522
Length = 454
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 155/473 (32%), Positives = 238/473 (50%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEYG 153
TI A T G G VGI+R+SG A ++ V + P +Y
Sbjct: 6 TIVAQATPPGR--GGVGILRISGFKAREVAETVLGKL--------------PKPRYADYL 49
Query: 154 VVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA-GATLAQPG 212
D G+V+D+ +A+ P S+T EDV+ELQ HG V L +L+ L G +A+PG
Sbjct: 50 PFKDADGSVLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPG 109
Query: 213 EFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTE 272
EF+ RAFLN +LDL+QAE + LI +QG FS+ V + L
Sbjct: 110 EFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIY 169
Query: 273 IEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGK 331
+EA +DF D+E+ L+ + +++ + D++ A LL+ G+++ I GRPN GK
Sbjct: 170 VEAAIDFPDEEIDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGK 229
Query: 332 SSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERS 391
SSLLNA + E AIVT+IAGTTRDV+ + + G+P+ ++DTAG+RE D VE+IG+ER+
Sbjct: 230 SSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERA 289
Query: 392 EAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNE 451
AD ++ V DG T++ + + P+ +V NK D
Sbjct: 290 WQEIEQADRVLFMV---DGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGM 346
Query: 452 WNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKE 511
G++ + A TG+G+ L + + +G GG + +R + L + E
Sbjct: 347 SEVNGHAL---IRLSARTGEGVDVLRNHLKQSMGFDTNMEGG--FLARRRHLQALEQAAE 401
Query: 512 ALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
L + K+ + + +LR A L +I+GE S+++L IF FCIGK
Sbjct: 402 HLQQGKAQLLGAWAGELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK 454
>TIGR_CMR|ECH_0060 [details] [associations]
symbol:ECH_0060 "tRNA modification GTPase TrmE"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003924 GO:GO:0006400 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291 OMA:IDFPEEV
RefSeq:YP_506891.1 ProteinModelPortal:Q2GI42 STRING:Q2GI42
GeneID:3927317 KEGG:ech:ECH_0060 PATRIC:20575687
BioCyc:ECHA205920:GJNR-60-MONOMER Uniprot:Q2GI42
Length = 439
Score = 422 (153.6 bits), Expect = 5.3e-49, Sum P(2) = 5.3e-49
Identities = 95/250 (38%), Positives = 148/250 (59%)
Query: 157 DRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATL--AQPGEF 214
D+ G V+DE + V +AP S+T EDVVE HGS ++ +L E G A PGEF
Sbjct: 51 DKDGEVIDEAIVVYFVAPNSFTGEDVVEFHTHGSFAVIKMILA---ELGKIFVPAGPGEF 107
Query: 215 TLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIE 274
+LRAFLN ++DL++AE + LI+ + G L + R + I++L+ IE
Sbjct: 108 SLRAFLNNKVDLTRAEAIVDLINSETEMQAKQAIRQMSGVLEKLYQNWRQQLIDILSNIE 167
Query: 275 ARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSL 334
A +DF +E+ + + ++ + + +E+ L + L+ G+ + I+G PN GKS+L
Sbjct: 168 AYIDFPEEVNSSAIANIDYLLNNLQKSLESHLNDDRRGERLRQGIYVTILGEPNSGKSTL 227
Query: 335 LNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAV 394
N +K + AIV+E AGTTRD +EA + V G P+ ++DTAGIRE+ D VE+ G++R++
Sbjct: 228 FNHLAKRDIAIVSEYAGTTRDPLEAHIDVAGYPIIIIDTAGIRESTDPVEQEGIKRAKLK 287
Query: 395 ALGADV-IIM 403
A AD I+M
Sbjct: 288 AENADFKIVM 297
Score = 106 (42.4 bits), Expect = 5.3e-49, Sum P(2) = 5.3e-49
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 499 NQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFG 558
++RQ + + T + + S++ LP++ + DLR + LG++ G +++L N+FG
Sbjct: 378 SERQRKHIQNT----LNIIKSVDLSLPMEIVSEDLRLSVRELGKVVGVISDDDILDNVFG 433
Query: 559 KFCIGK 564
KFCIGK
Sbjct: 434 KFCIGK 439
>TIGR_CMR|CJE_1036 [details] [associations]
symbol:CJE_1036 "tRNA modification GTPase TrmE"
species:195099 "Campylobacter jejuni RM1221" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:YP_179032.1 ProteinModelPortal:Q5HUK3
STRING:Q5HUK3 GeneID:3231546 KEGG:cjr:CJE1036 PATRIC:20043873
BioCyc:CJEJ195099:GJC0-1063-MONOMER Uniprot:Q5HUK3
Length = 442
Score = 442 (160.7 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 118/362 (32%), Positives = 183/362 (50%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEYG 153
TIAAI T+ G G++ IVRLSG A++ ++ + T +
Sbjct: 4 TIAAIATAHG--VGSISIVRLSGERALEFALKLSHKT-------------KLTPRHATFT 48
Query: 154 VVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGE 213
+ +++ ++DE + + AP S+T ED+VE Q HG +L + GA LA GE
Sbjct: 49 KLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQIHGGFSVSEVLLEELVSLGARLALAGE 108
Query: 214 FTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEI 273
F+ RA LNG++ +A N++ LI +QG L+ +R ++ L +
Sbjct: 109 FSKRACLNGKMTPLKALNIQDLILSKSALAAKIIARNMQGNLGELLEKIRTDLVKTLAFV 168
Query: 274 EARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKS 332
E +D+ DD++P L + S+ ++ + K L G +IAIVG+PNVGKS
Sbjct: 169 ETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKS 228
Query: 333 SLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSE 392
SLLNA ERAIV++IAGTTRD IE S + + ++DTAGIRE+ D++E+IGV S+
Sbjct: 229 SLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESKDVIEQIGVALSK 288
Query: 393 AVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEW 452
AD+I+ A ED ++ + + + K + ++NK D N
Sbjct: 289 KSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKK------IFWILNKSDLENVFKNTQ 342
Query: 453 NK 454
NK
Sbjct: 343 NK 344
Score = 82 (33.9 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ EA+ R K +EE L+ + +L A L + + + +E+L +FG FC+GK
Sbjct: 388 SSEAIFRAKGLLEES-SLELFAFELNLAINELARFTKDFQRDEILDEMFGNFCLGK 442
>TIGR_CMR|SPO_3895 [details] [associations]
symbol:SPO_3895 "tRNA modification GTPase TrmE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0003924
GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_169083.1
ProteinModelPortal:Q5LLM7 GeneID:3196284 KEGG:sil:SPO3895
PATRIC:23381297 Uniprot:Q5LLM7
Length = 428
Score = 425 (154.7 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 114/319 (35%), Positives = 164/319 (51%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEYG 153
TI A+ T+ G V ++RLSGP A + P P S +
Sbjct: 3 TIFALATAQG--KAGVAVIRLSGPRAYHTACLLAGPDL-------------P-SRGLSVR 46
Query: 154 VVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA--GATLAQP 211
+ D G +D+ + + AP S+T EDV E Q HGS VLR CL G LA+P
Sbjct: 47 QLKDSQGARLDDGVVLTFAAPASFTGEDVAEFQIHGSLATTEAVLR-CLGDLDGLRLAEP 105
Query: 212 GEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLT 271
GEFT RA NG++ L Q E + LI + G L RAK I
Sbjct: 106 GEFTRRALENGKMSLPQVEGLADLIDAETEAQRKQAQAVLNGALGQLAEGWRAKLIRAAA 165
Query: 272 EIEARLDFDDEMPPLNLNLVMDKIHA-MSQDVENALETANYDKLLQSGLQIAIVGRPNVG 330
+EA +DF DE P +++ + + A + D+E+ + + +++G ++AI+G PN G
Sbjct: 166 LLEAVIDFADEEVPTDVSPEVRALLAEVRADLEHEIAGVRIAERIRTGFEVAIIGPPNAG 225
Query: 331 KSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVER 390
KS+LLN + E A+ +E+AGTTRDVIE + + G+PVTLLDTAG+RET D+VE +G+
Sbjct: 226 KSTLLNMLAGREAALTSEVAGTTRDVIEVRMDLGGLPVTLLDTAGLRETGDLVEGMGIAL 285
Query: 391 SEAVALGADVIIMTVSAVD 409
+ A AD+ + VD
Sbjct: 286 ARRRADQADLRVFLTEDVD 304
Score = 91 (37.1 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 31/98 (31%), Positives = 43/98 (43%)
Query: 468 VTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPL- 526
VTGQG+ L I ++ AG A +R + +AL R + +E L
Sbjct: 334 VTGQGVDQLVQRISDVLKTRSSSAG---IATRERHRVAMKTALDALDRTGTVLESGPDLY 390
Query: 527 DFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
D +LR A AL + G E +L IF FC+GK
Sbjct: 391 DIAAEELRTAIRALESLVGRIGVETLLDEIFASFCLGK 428
>WB|WBGene00009557 [details] [associations]
symbol:F39B2.7 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006400 "tRNA
modification" evidence=IEA] [GO:0015093 "ferrous iron transmembrane
transporter activity" evidence=IEA] [GO:0015684 "ferrous iron
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0005622 GO:GO:0006400
HSSP:P25522 eggNOG:COG0486 HOGENOM:HOG000200714 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ GeneTree:ENSGT00390000016851 EMBL:Z92834 PIR:T21994
RefSeq:NP_493573.1 ProteinModelPortal:Q9XTZ1 SMR:Q9XTZ1
IntAct:Q9XTZ1 STRING:Q9XTZ1 PaxDb:Q9XTZ1 EnsemblMetazoa:F39B2.7.1
EnsemblMetazoa:F39B2.7.2 GeneID:3564835 KEGG:cel:CELE_F39B2.7
UCSC:F39B2.7 CTD:3564835 WormBase:F39B2.7 InParanoid:Q9XTZ1
NextBio:954161 Uniprot:Q9XTZ1
Length = 439
Score = 399 (145.5 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 110/389 (28%), Positives = 202/389 (51%)
Query: 101 SIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEYGVVLDRHG 160
S G P A+ + R+SG ++ ++ ++ + W+P + ++Y + D
Sbjct: 8 SSGTLPSAIAMFRVSGSQSLPVLRQLSR-----------RKVWKPKT--MKYTKLYDSES 54
Query: 161 NVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATL--AQPGEFTLRA 218
++DE +AV + P+++T ED E HGS+ + +CL + A+ GEFT RA
Sbjct: 55 KIIDEAMAVYLPGPKTFTGEDTAEFFLHGSQAVAVK-FASCLAGIQNVREAKRGEFTRRA 113
Query: 219 FLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLD 278
F NG+L +S+ +++LI ++GG ++ +R + I++L+++ +D
Sbjct: 114 FHNGKLSISEVRGIDRLIKSRTEKERNAAFGQMRGGVRAI--EIRKQLIQILSKLFVIID 171
Query: 279 FDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAW 338
F + + L L + + ++ ++ + + Q GL I + GRPN GKSS+LN
Sbjct: 172 FGEHVN-LELREAQQDVSEILHELNRMIKAWDGAERAQRGLDIVLYGRPNSGKSSILNQL 230
Query: 339 SKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE-TDDIVEKIGVERSEAVALG 397
+ + AIV+ I GTTRD +E + + GV L DTAG+R+ T+D++E G+ R++
Sbjct: 231 AHDDVAIVSSIPGTTRDSLETIIQINGVRCRLTDTAGVRQKTNDVIEAEGIRRAQKRIQS 290
Query: 398 ADVIIMTVSAVDGWTSEDS--ELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKV 455
AD+I + V +TS+D +LN ++ ++ E+ +I+ NK D S ++ K+
Sbjct: 291 ADIICVVVDPQ--FTSDDDVESILNDVEV-MRNREAR--VIIAKNKSDL----SLKYPKL 341
Query: 456 GNSFNDHVFTCAVTGQGIQDLETAIMKIV 484
++F V T A T G + L+ + +IV
Sbjct: 342 PSNFTT-VSTNATTDTGCKQLQNCLGEIV 369
Score = 68 (29.0 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 540 LGQISGEDISEEVLSNIFGKFCIGK 564
+G+++ ++E VL IF KFCIGK
Sbjct: 415 IGELTEGIVTESVLDGIFSKFCIGK 439
>UNIPROTKB|P75104 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:272634
"Mycoplasma pneumoniae M129" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264
GO:GO:0046872 GO:GO:0003924 GO:GO:0006400 EMBL:U00089
GenomeReviews:U00089_GR eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 OMA:IDFPEEV PIR:S73472 RefSeq:NP_109696.1
ProteinModelPortal:P75104 IntAct:P75104 GeneID:877349
KEGG:mpn:MPN008 PATRIC:20021289 BioCyc:MPNE272634:GJ6Z-8-MONOMER
Uniprot:P75104
Length = 442
Score = 404 (147.3 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 110/356 (30%), Positives = 181/356 (50%)
Query: 91 TFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVF-KPVXXXXXXXXXXXXWRPTSHV 149
T T+ A+ T+ A+ I+RLSGP I+ ++ K V +P
Sbjct: 3 TKQTMFALATAPFN--SAIHIIRLSGPDVYRIINQITNKEV-------------KPLGMR 47
Query: 150 VEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLA 209
++ ++D + VD+VL +AP SYT ED++E+ CHGS V + ++ L+ GA A
Sbjct: 48 IQRVWLIDHNQKKVDDVLLFKFVAPNSYTGEDLIEISCHGSMVIVNEIIGLLLKHGAVQA 107
Query: 210 QPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIEL 269
QPGEFT R +LNG++ L+QA +V L+ + G + + + K +L
Sbjct: 108 QPGEFTQRGYLNGKMSLNQAASVNNLVLSPNTTLKDVALNALAGQVDARLEPLVEKLGQL 167
Query: 270 LTEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKL--LQSGLQIAIVGRP 327
+ ++E LD+ + + M++ + N + D+L L+ +IAI+G
Sbjct: 168 VMQMEVNLDYPEYTDEQRELVTMNQAVVQITQILNQI-VVGQDQLQRLKDPFKIAIIGNT 226
Query: 328 NVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIG 387
NVGKSSLLNA ++AIV+ I G+TRD++E + G V +LDTAGIR+ +EK G
Sbjct: 227 NVGKSSLLNALLDQDKAIVSAIKGSTRDIVEGDFALNGHFVKILDTAGIRQHQSALEKAG 286
Query: 388 VERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKID 443
++++ A+++I + A D +++ R++ KK LV NK D
Sbjct: 287 IQKTFGAIKTANLVIYLLDARQ--PEPDPKIIARLKKLKKD------FFLVHNKAD 334
Score = 62 (26.9 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 16/63 (25%), Positives = 35/63 (55%)
Query: 505 QLMRTKEALVRLKSSIEEE---LPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFC 561
Q + ++A+ L+ + ++ L D + LR A + Q+ G++ + ++++ IF FC
Sbjct: 380 QTILLQKAIAELEHFLIKQQNCLFFDILVVHLRAAHEYILQVLGKNTNYDLINEIFKHFC 439
Query: 562 IGK 564
+GK
Sbjct: 440 LGK 442
>POMBASE|SPAC222.05c [details] [associations]
symbol:mss1 "mitochondrial GTPase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=ISM] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005743 "mitochondrial
inner membrane" evidence=ISO] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=ISO]
[GO:0006412 "translation" evidence=ISO] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 PomBase:SPAC222.05c GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0005743 GO:GO:0003924 GO:GO:0032543 GO:GO:0006400
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:IRISGTH PIR:T50146 RefSeq:NP_593144.1 ProteinModelPortal:Q9UTE7
STRING:Q9UTE7 EnsemblFungi:SPAC222.05c.1 GeneID:2541951
KEGG:spo:SPAC222.05c OrthoDB:EOG4B2X62 NextBio:20803035
Uniprot:Q9UTE7
Length = 496
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 144/494 (29%), Positives = 228/494 (46%)
Query: 99 VTSIGGPPG--AVGIVRLSGP----MAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEY 152
+ ++ PPG AV IVR+SGP +A + G V KP R H V
Sbjct: 26 IYALSTPPGTSAVAIVRISGPNACKVAKTLAGSVPKP---------RIASLRTIKHPVR- 75
Query: 153 GVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGAT---LA 209
V+D+ L + P S+T EDVVELQ HG + L A ++G A
Sbjct: 76 -------SEVIDKALMLYFKKPSSFTGEDVVELQLHGGTAVVDVTLEAIKQSGIPNIRYA 128
Query: 210 QPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIEL 269
+PGEF+ RAF NGR DL+Q E + +I+ G + R K IE
Sbjct: 129 KPGEFSERAFYNGRADLTQLEGLIDVINAQTAEQLYSANKEAHGSIYDICFRWRKKLIEY 188
Query: 270 LTEIEARLDFDDE--MPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRP 327
+EA +DF +E + + + ++++ M +++ +E ++L+ G+ +AI+G
Sbjct: 189 RAFLEASIDFSEEHELDDIETIKLFEELNEMKDEIDAHIEGGKCKEVLRKGINVAILGPS 248
Query: 328 NVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDI--VEK 385
N GKSSL+N + +IV+ +GTTRD IE V + G PV L DTAG+R+ +D+ +EK
Sbjct: 249 NAGKSSLINLLANRRISIVSPQSGTTRDAIEVLVDINGFPVLLSDTAGLRKGEDVQEIEK 308
Query: 386 IGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCA 445
IG+E ++A A + + + SE + +++ K P+ +INK+DC
Sbjct: 309 IGIEIAKARAEESQLTLFVFPINYHSFSESLKQSEILETIKDCLRQRKPIHFLINKVDCV 368
Query: 446 PSASNEWNKVG----NSF-----NDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRR- 495
+ + + +F H +C T +G+ D A+ P +
Sbjct: 369 SDYTTMFKPIKAYLQKNFLIPENRIHAVSCK-TKEGLIDFLQALSSTFECMVNPLTNNKI 427
Query: 496 -----WAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISE 550
W QRQC + +L KSS ++ + + L A +G+++G E
Sbjct: 428 QANLGWNERQRQCLSSCSSHLSLALQKSS---DIVVAAEEVKL--ATEDIGRVTGAVDME 482
Query: 551 EVLSNIFGKFCIGK 564
V S IF KFC+GK
Sbjct: 483 NVFSVIFSKFCVGK 496
>TIGR_CMR|NSE_0717 [details] [associations]
symbol:NSE_0717 "tRNA modification GTPase TrmE"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 SMART:SM00382
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872
GO:GO:0003924 GO:GO:0006400 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:YP_506593.1 ProteinModelPortal:Q2GD53 STRING:Q2GD53
GeneID:3931628 KEGG:nse:NSE_0717 PATRIC:22681449 OMA:IEAHIIT
ProtClustDB:CLSK2528116 BioCyc:NSEN222891:GHFU-729-MONOMER
Uniprot:Q2GD53
Length = 550
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 116/314 (36%), Positives = 169/314 (53%)
Query: 93 STIAAIVTSIGGPPGAVGIVRLSGP---MAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHV 149
STI A+ T G V + R+SGP A++++G K +P
Sbjct: 2 STIYALSTVFG--KSGVAVFRISGPDALRALELLGLDIK---------------QPRPRF 44
Query: 150 VEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLA 209
V + + D ++DEVL V +P S+T EDVVEL HGS LR + L A
Sbjct: 45 VYFARLFDEQ-LLIDEVLVVYFASPASFTGEDVVELHSHGSIAVLRYISEK-LSTLFKPA 102
Query: 210 QPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIEL 269
+PGEFT RA LN R+DL++AE + +I+ + G + S+R K I++
Sbjct: 103 EPGEFTRRAVLNNRMDLTKAEGIIDIINSETQEQLKQASRHLSGKLAEEYNSLRDKIIKV 162
Query: 270 LTEIEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
L+ +EA +DF D+E+P L + I A+ D+ L + ++ G + IVG+PN
Sbjct: 163 LSYLEAYIDFPDEEIPETVLAEIQQSIVAIQCDISRYLADGKVGEKIREGFSVVIVGKPN 222
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKS+L N +K + AIVT+I GTTRD++E + G PV L DTAGI+ET D +EK+G+
Sbjct: 223 VGKSTLFNYLAKRDLAIVTDIPGTTRDILEVRLDCHGYPVILSDTAGIQETCDAIEKMGI 282
Query: 389 ERSEAVALGADVII 402
R+ A ADVI+
Sbjct: 283 TRALKKATEADVIV 296
>SGD|S000004625 [details] [associations]
symbol:MSS1 "Mitochondrial protein" species:4932
"Saccharomyces cerevisiae" [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0070899
"mitochondrial tRNA wobble uridine modification" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
SGD:S000004625 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0005743 GO:GO:0003924 EMBL:BK006946 EMBL:Z49211
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:IRISGTH GeneTree:ENSGT00390000016851 OrthoDB:EOG4B2X62
EMBL:X69481 EMBL:DQ834923 PIR:S54025 RefSeq:NP_013736.1
ProteinModelPortal:P32559 SMR:P32559 DIP:DIP-5882N IntAct:P32559
MINT:MINT-2788166 STRING:P32559 PaxDb:P32559 EnsemblFungi:YMR023C
GeneID:855037 KEGG:sce:YMR023C CYGD:YMR023c NextBio:978251
Genevestigator:P32559 GermOnline:YMR023C GO:GO:0070899
Uniprot:P32559
Length = 526
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 145/505 (28%), Positives = 238/505 (47%)
Query: 88 KAGTFS--TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGR-VFKPVXXXXXXXXXXXXWR 144
K TF TI A+ T A+ I+R+SG A I R V +
Sbjct: 30 KPYTFQQPTIYALSTP-ANQTSAIAIIRISGTHAKYIYNRLVDSSTVPPIRKAILRNIYS 88
Query: 145 PTSHVVEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRAC--- 201
P+S V+ + ++D L + AP S+T EDV+EL HG + + +L+A
Sbjct: 89 PSSCSVKPHDQKESK-ILLDTSLLLYFQAPYSFTGEDVLELHVHGGKAVVNSILKAIGSL 147
Query: 202 --LEAGATL--AQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSS 257
+G + A PG+F+ RAF NG+ DL+Q E ++ LI G
Sbjct: 148 HDRSSGKDIRFALPGDFSRRAFQNGKFDLTQLEGIKDLIDSETESQRRSALSSFNGDNKI 207
Query: 258 LVTSVRAKCIELLTEIEARLDF-DDEMPPL-NLNLVMDKIH----AMSQDVENALETANY 311
L + R IE + ++ A +DF DD + N + + + + + ++
Sbjct: 208 LFENWRETIIENMAQLTAIIDFADDNSQEIQNTDEIFHNVEKNIICLRDQIVTFMQKVEK 267
Query: 312 DKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLL 371
+LQ+G+++ ++G PNVGKSSL+N+ + + +IV++I GTTRD I+A + V G V +
Sbjct: 268 STILQNGIKLVLLGAPNVGKSSLVNSLTNDDISIVSDIPGTTRDSIDAMINVNGYKVIIC 327
Query: 372 DTAGIRE-TDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTE 430
DTAGIRE + D +E +G++R++ ++ +D+ + V D ++L + S T
Sbjct: 328 DTAGIREKSSDKIEMLGIDRAKKKSVQSDLCLFIVDPTDLSKLLPEDILAHLSSK---TF 384
Query: 431 SSTPMILVINKIDCAPSASNEWNKVGNSFNDHV--------FTCAVTGQGIQDL-ETAIM 481
+ +I+V+NK D + +E KV N + +C T +GI+ L T
Sbjct: 385 GNKRIIIVVNKSDLV--SDDEMTKVLNKLQTRLGSKYPILSVSCK-TKEGIESLISTLTS 441
Query: 482 KIVGLHQIPAGGRRWAVNQRQCEQLMR-TKEALVRLKSSIEEELPLDFWTIDLRDAALAL 540
L Q A V++R E L L S + + T +LR A+ +
Sbjct: 442 NFESLSQSSADASPVIVSKRVSEILKNDVLYGLEEFFKSKDFHNDIVLATENLRYASDGI 501
Query: 541 GQISGEDIS-EEVLSNIFGKFCIGK 564
+I+G+ I EE+L ++F KFCIGK
Sbjct: 502 AKITGQAIGIEEILDSVFSKFCIGK 526
>TIGR_CMR|APH_1288 [details] [associations]
symbol:APH_1288 "tRNA modification GTPase TrmE"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ RefSeq:YP_505803.1 ProteinModelPortal:Q2GIJ8
STRING:Q2GIJ8 GeneID:3930863 KEGG:aph:APH_1288 PATRIC:20951370
ProtClustDB:PRK05291 BioCyc:APHA212042:GHPM-1290-MONOMER
Uniprot:Q2GIJ8
Length = 445
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 131/468 (27%), Positives = 232/468 (49%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEYG 153
TI A+ T+ G V ++R+SGP +++ + R+ P V
Sbjct: 8 TIFALSTAQG--KSGVAVIRISGPSSMEAL-RLLGVKDDIS----------P--RVAHCR 52
Query: 154 VVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGE 213
++ D G ++D+ + + P S+T EDVVELQ HGS +R +L L+ +A+PGE
Sbjct: 53 LLHDSKGRLIDQAVVLYFPKPGSFTGEDVVELQVHGSRAVIR-LLYEELQTFIRIAEPGE 111
Query: 214 FTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEI 273
F+LRA+LNG++DL++AE + LI+ G R+ +++LT++
Sbjct: 112 FSLRAYLNGKIDLTRAEGIADLINAETDAQLRQALAQSTGKLEKQYDQWRSILLDILTDL 171
Query: 274 EARLDFDDEMPP-LNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKS 332
EA +DF +++ L + + I + + L + + L+SG+++ I+G PN GKS
Sbjct: 172 EACIDFPEDVDSSCVLGGIYNNIEKLCAVLGQYLNDGHRGERLRSGVRVVILGPPNAGKS 231
Query: 333 SLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSE 392
+L N+ ++ AIV+E GTTRDV+E ++ + G P +LDTAGIRE+ D +E+ G++R++
Sbjct: 232 TLFNSIARRNAAIVSEHPGTTRDVLEVAIDIGGYPYIVLDTAGIRESCDGIEQEGIKRAK 291
Query: 393 AVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEW 452
A AD+ I+ + + + + + + +Q K ILV++K D ++
Sbjct: 292 MAAEEADIKIV-MYPYETTSMQGIDPICDLQDEKT--------ILVLSKADNVDLPESKC 342
Query: 453 NKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEA 512
G F H+ + +GI L T I + P G + +QR L + +
Sbjct: 343 ID-GKEF--HLISVH-QDRGIGKLLTLIQE-KSRDSFPQEGDVFITSQRHRSHLQKALQV 397
Query: 513 LVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNI-FGK 559
+ + + E+ + I + G +SG+DI +++ S GK
Sbjct: 398 VDAVSKVMPIEIVAEHLRIAAYELGRVTGAVSGDDILDDIFSKFCIGK 445
>CGD|CAL0004408 [details] [associations]
symbol:orf19.2042 species:5476 "Candida albicans" [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:1900524 "positive
regulation of flocculation via cell wall protein-carbohydrate
interaction by positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0070899 "mitochondrial
tRNA wobble uridine modification" evidence=IEA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 CGD:CAL0004408 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0005622 GO:GO:0006400 EMBL:AACQ01000031
EMBL:AACQ01000030 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:XP_719491.1 RefSeq:XP_719616.1 ProteinModelPortal:Q5AD25
STRING:Q5AD25 GeneID:3638773 GeneID:3638809 KEGG:cal:CaO19.2042
KEGG:cal:CaO19.9590 Uniprot:Q5AD25
Length = 529
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 139/495 (28%), Positives = 234/495 (47%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXX-XXXXXXXXXXWRPTSHVVEY 152
T+ A+ T G A+ +VR+SGP + I ++ + P H +
Sbjct: 52 TVFALSTKFG--KSAIAVVRISGPQSKYIYHKLTNSTKPPKNRIASVRKLYSPEPHSNKK 109
Query: 153 GVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA-----GAT 207
V LD E L + + P++YT ED++EL HG ++ VL++ + G
Sbjct: 110 SVFLD-------EALTLFLPGPKTYTGEDLLELHLHGGVAIIKSVLQSIKKLHDPNNGVI 162
Query: 208 LAQP--GEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAK 265
+ Q GEF+ +AF NGRLDL++ E + +I+ G R +
Sbjct: 163 IRQADRGEFSKQAFYNGRLDLTELEGINDMINAETESQRLASLASSSGQTKIEFMKWRNE 222
Query: 266 CIELLTEIEARLDF----DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQI 321
I + + +DF D E + V + I + +++ L ++L +G+Q+
Sbjct: 223 IINQMANLTMIIDFGEDHDIEETDRMIRDVKENIAKIESEIKAYLSKVKSSQILLNGIQL 282
Query: 322 AIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIR--ET 379
A++G PN GKSS+LN + + AIV+EIAGTTRD+++ + + G V + DTAGIR E
Sbjct: 283 ALLGPPNAGKSSILNILANKDAAIVSEIAGTTRDILDIPLEIGGYKVVVGDTAGIRSFEE 342
Query: 380 DDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
D +E+ G++R++ ++ AD +I+ + + S + E L + K +++ M++V+
Sbjct: 343 ADSIEQEGIKRAKQRSMLADFVIVVLDPM----SVEKEPLELKEHLKTLVKANKQMLIVL 398
Query: 440 NKIDCAPSASNEWNKVGNSFND------HVFTCAVTGQGIQDLETAIM-KIVGLHQIPAG 492
NK D S S E + D HV +C+ TG GI +L+ ++ K L Q
Sbjct: 399 NKQDLFASRSEEMISNYSRLLDLPKNYFHVVSCS-TGSGIDNLQKLLIEKFKDLSQSETS 457
Query: 493 GRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFW--TIDLRDAALALGQISGEDIS- 549
V+ R + ++ + L K D T LR + +G+I+G+ I
Sbjct: 458 NPI-IVSSR-VQDILEN-DILFGFKEFYHWADAEDVLVATDCLRQSVDGIGKITGQSIDL 514
Query: 550 EEVLSNIFGKFCIGK 564
EE+L +F FCIGK
Sbjct: 515 EEILDVVFSSFCIGK 529
>UNIPROTKB|Q969Y2 [details] [associations]
symbol:GTPBP3 "tRNA modification GTPase GTPBP3,
mitochondrial" species:9606 "Homo sapiens" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0003924 GO:GO:0006400
EMBL:CH471106 EMBL:AC010463 CTD:84705 eggNOG:COG0486
HOVERGEN:HBG081577 KO:K03650 OrthoDB:EOG4WH8KW InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 EMBL:AF360742
EMBL:AF361481 EMBL:AF360743 EMBL:AF360744 EMBL:AY078987
EMBL:AY078988 EMBL:AK027606 EMBL:AK291929 EMBL:AK297953
EMBL:BC017207 EMBL:BC019261 IPI:IPI00464994 IPI:IPI00644024
IPI:IPI00783945 IPI:IPI00982192 RefSeq:NP_001122327.1
RefSeq:NP_001182351.1 RefSeq:NP_116009.2 RefSeq:NP_598399.2
UniGene:Hs.334885 HSSP:Q9WYA4 ProteinModelPortal:Q969Y2 SMR:Q969Y2
IntAct:Q969Y2 MINT:MINT-2877402 STRING:Q969Y2 PhosphoSite:Q969Y2
DMDM:74731069 PaxDb:Q969Y2 PRIDE:Q969Y2 DNASU:84705
Ensembl:ENST00000324894 Ensembl:ENST00000358792
Ensembl:ENST00000361619 GeneID:84705 KEGG:hsa:84705 UCSC:uc002ngg.4
UCSC:uc002ngh.4 UCSC:uc010eas.3 GeneCards:GC19P017448
H-InvDB:HIX0014890 HGNC:HGNC:14880 HPA:HPA042158 MIM:580000
MIM:608536 neXtProt:NX_Q969Y2 PharmGKB:PA134883205 OMA:PGEFSEQ
GenomeRNAi:84705 NextBio:74792 ArrayExpress:Q969Y2 Bgee:Q969Y2
CleanEx:HS_GTPBP3 Genevestigator:Q969Y2 Uniprot:Q969Y2
Length = 492
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 128/414 (30%), Positives = 193/414 (46%)
Query: 158 RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA-GATLAQPGEFTL 216
R G +D L + P+S+T ED VE HG + VL+A G A+ GEFT
Sbjct: 86 RSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPAVVSGVLQALGSVPGLRPAEAGEFTR 145
Query: 217 RAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEAR 276
RAF NG+L+L++ E + LI + G L + L +EA
Sbjct: 146 RAFANGKLNLTEVEGLADLIHAETEAQRRQALRQLDGELGHLCRGWAETLTKALAHVEAY 205
Query: 277 LDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSL 334
+DF DD + L ++ A+ + L A + L+SG+ + + G PN GKSSL
Sbjct: 206 IDFGEDDNLEEGVLEQADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSL 265
Query: 335 LNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAV 394
+N S+ +IV+ GTTRDV+E V + G PV L DTAG+RE VE+ GV R+
Sbjct: 266 VNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARER 325
Query: 395 ALGADVIIMTVSAVDGWTSEDSELLNRIQSN---KKSTESSTPMILVINKIDCAPSASNE 451
AD+I+ + A D + L + ++ + ++SS ++LV+NK D S E
Sbjct: 326 LEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLL---SPE 382
Query: 452 WNKVGNSFNDHVFTCAVTGQGIQDLETAIMK-IVGLHQIPAGGRRWAVNQRQCEQLMRTK 510
G H+ +TG+G+ L A+ K + + P+ R L
Sbjct: 383 GPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCL 442
Query: 511 EALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+AL K S + L + LR A L +++G +EE+L IF FC+GK
Sbjct: 443 DALGHYKQSKDLALAAEA----LRVARGHLTRLTGGGGTEEILDIIFQDFCVGK 492
>UNIPROTKB|E1BH64 [details] [associations]
symbol:E1BH64 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0046872 GO:GO:0003924 GO:GO:0006400
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
OMA:PGEFSEQ GeneTree:ENSGT00390000016851 EMBL:DAAA02019078
IPI:IPI00710937 ProteinModelPortal:E1BH64
Ensembl:ENSBTAT00000005506 Uniprot:E1BH64
Length = 493
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 139/496 (28%), Positives = 221/496 (44%)
Query: 77 RLVADNGESEEKAGTFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXX 136
RL G G+ +TI A+ S G + ++R SGP + G + +
Sbjct: 20 RLCTRQGSGYRAPGSGATIFAL--SSGQGRCGIAVIRTSGPAS----GHALQSLTAPRDL 73
Query: 137 XXXXXXWRPTSHVVEYGVVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLR 195
P + ++ D R G +D L + P+S+T ED E HG +
Sbjct: 74 --------PLARKACLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCAEFHVHGGPAVVS 125
Query: 196 RVLRACLEA-GATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGG 254
VL+A G A+ GEFT RAF +G+L L++ E + LI + G
Sbjct: 126 GVLQALGSVPGLRPAEAGEFTRRAFAHGKLSLTEVEGLADLIHAETEAQRRQALRQLDGE 185
Query: 255 FSSLVTSVRAKCIELLTEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYD 312
L + L +EA +DF DD + L+ ++ + + L A
Sbjct: 186 LGDLCRGWAETLTKALAHVEAYIDFSEDDNLEEGVLDQADSEVRKLEVALGVHLRDARRG 245
Query: 313 KLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLD 372
+ L+SG + + G PN GKSSL+N S+ +IV+ GTTRDV+E V + G P L D
Sbjct: 246 QRLRSGAHVVVAGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPALLSD 305
Query: 373 TAGIRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNR--IQSNKKSTE 430
TAG+RE VE+ GV R++ AD+I+ + A D + L+ I + ++
Sbjct: 306 TAGLREGVGPVEQEGVRRAQKRLEQADLILAVLDASDLASPASCNFLDTVVIPAGARNPN 365
Query: 431 SSTP-MILVINKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMK-IVGLHQ 488
S ++LV+NK D P+ ++ + H+ +TG+G+ L A+ K + L
Sbjct: 366 GSRQRLLLVLNKSDLLPAGRSDLHP---DLPSHLLLSCLTGEGLDGLLEALKKELAALCG 422
Query: 489 IPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDI 548
P+ G ++ Q L +AL + K + + L + LR A L ++G
Sbjct: 423 DPSTGPLLTRSRHQ-HHLRGCLDALGQYKQAKDLALAAEA----LRVARGHLSHLTGGGG 477
Query: 549 SEEVLSNIFGKFCIGK 564
+EE+L IF FC+GK
Sbjct: 478 TEEILDIIFRDFCVGK 493
>RGD|1305367 [details] [associations]
symbol:Gtpbp3 "GTP binding protein 3" species:10116 "Rattus
norvegicus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006400 "tRNA modification" evidence=IEA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 RGD:1305367 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0006400 CTD:84705 eggNOG:COG0486
HOGENOM:HOG000200714 HOVERGEN:HBG081577 KO:K03650 OrthoDB:EOG4WH8KW
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 HSSP:Q9WYA4 GeneTree:ENSGT00390000016851
EMBL:BC087083 IPI:IPI00358231 RefSeq:NP_001011919.1
UniGene:Rn.109111 ProteinModelPortal:Q5PQQ1 STRING:Q5PQQ1
PhosphoSite:Q5PQQ1 PRIDE:Q5PQQ1 Ensembl:ENSRNOT00000060355
GeneID:290633 KEGG:rno:290633 UCSC:RGD:1305367 NextBio:631337
Genevestigator:Q5PQQ1 Uniprot:Q5PQQ1
Length = 492
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 125/412 (30%), Positives = 194/412 (47%)
Query: 160 GNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA-GATLAQPGEFTLRA 218
G +D L + P+S+T ED +EL HG + VL+A G A+ GEFT RA
Sbjct: 88 GEPLDRSLVLWFPGPQSFTGEDCMELHVHGGPAVVSGVLQALGSVPGLRPAKAGEFTRRA 147
Query: 219 FLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLD 278
F +G+L L++ E + LI + G S L + L +EA +D
Sbjct: 148 FAHGKLSLTEVEGLADLIHAETEAQRRQALRQLDGELSQLCQGWAKTLTKALAHVEAYID 207
Query: 279 F--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLN 336
F DD + L V + A+ + + L A + L+SG + + G PN GKSSL+N
Sbjct: 208 FGEDDNLEEGVLEQVDRDVRALEVALSSHLRDARRGQRLRSGANVVVAGPPNAGKSSLVN 267
Query: 337 AWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVAL 396
S+ +IV+ GTTRD++E V + G PV L DTAG+RE VE+ GV R+
Sbjct: 268 LLSQKPVSIVSPEPGTTRDILETPVDLAGFPVLLSDTAGLREGAGAVEQEGVRRARQRLE 327
Query: 397 GADVIIMTVSAVDGWTSEDSELLNRIQSN--KKSTESSTP-MILVINKIDCAPSASNEWN 453
AD+I+ + A D +S L+ + + +S +S ++L++NK D SA+ +
Sbjct: 328 QADIILGMLDASDLASSSSCSFLDTVVAPLVAQSHDSGRQRLLLLLNKSDLL-SANAPAS 386
Query: 454 KVGNSFNDHVFTCAVTGQGIQDLETAIM-KIVGLHQIPAGGRRWAVNQRQCEQLMRTKEA 512
+ H+ TG G+ L A+ ++ + P+ G R L +A
Sbjct: 387 ST--ALPPHLLLSCHTGAGMDALLQALKTELAAVCGDPSTGPPLLTRARHQYHLQGCLDA 444
Query: 513 LVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
L R + + + L + LR A L ++G +EE+L IF FC+GK
Sbjct: 445 LGRFQLTTDLALAAEA----LRQARRQLSHLTGGGGTEEILDLIFQDFCVGK 492
>ZFIN|ZDB-GENE-050522-335 [details] [associations]
symbol:gtpbp3 "GTP binding protein 3" species:7955
"Danio rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 ZFIN:ZDB-GENE-050522-335 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0006400
EMBL:BC095801 IPI:IPI00500987 RefSeq:NP_001018605.1
UniGene:Dr.41738 HSSP:P25522 ProteinModelPortal:Q501Z5 SMR:Q501Z5
STRING:Q501Z5 GeneID:553807 KEGG:dre:553807 CTD:84705
eggNOG:COG0486 HOGENOM:HOG000200714 HOVERGEN:HBG081577
InParanoid:Q501Z5 KO:K03650 OrthoDB:EOG4WH8KW NextBio:20880525
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 Uniprot:Q501Z5
Length = 500
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 145/470 (30%), Positives = 215/470 (45%)
Query: 109 VGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEYGVVLDRHGNVVDEVLA 168
V +VR+SGP + V R+ + + R SH + +LDR VL
Sbjct: 49 VAVVRVSGPASALAVRRLTRSLPAPRTASL-----RSISHP-QSKELLDR-----GLVLW 97
Query: 169 VPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA-GATLAQPGEFTLRAFLNGRLDLS 227
P P S+T ED E HG + VL+A G A+ GEFT RAF G+LDL+
Sbjct: 98 FP--GPASFTGEDSAEFHIHGGPAVISGVLQALGSLPGLRPAEAGEFTRRAFYAGKLDLT 155
Query: 228 QAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDF-DDEMPPL 286
+ E + LI + G + + L +EA +DF +DE+
Sbjct: 156 EVEGLSDLIHAETEAQRRQALRQMAGDLGRIYQDWTDQLKRCLAHVEAFIDFSEDELIED 215
Query: 287 N-LNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAI 345
LN V + + D+EN L + L+SG+ + I G N GKSSLLN ++ AI
Sbjct: 216 GVLNDVDRAVQQLQTDMENHLSDERRGERLRSGVHVVIAGSTNAGKSSLLNLLTQRPAAI 275
Query: 346 VTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTV 405
V+ AGTTRDV+E + + G PV L DTAG+R+T D VE+ GV R+ AD+ ++ V
Sbjct: 276 VSPTAGTTRDVLEVPLDIGGYPVLLSDTAGLRDTSDSVEQEGVRRARQRVEQADLSLVVV 335
Query: 406 SAVDGWTSEDSELLNRIQSNKKST-ESSTPM---ILVINKIDCAPSASNEWNKVGNSFND 461
SE + ++ + K+ E S+ IL++N+ D SA + + S +
Sbjct: 336 DLTQ-LPSERRHVPVFLRGHLKNILERSSQQQQHILILNESDLV-SAEQQ-RSIQTSLQE 392
Query: 462 ------HVFTCAVTGQGIQDLETAIMKIVG-LHQIPAGGRRWAVNQRQCEQLMRTKEALV 514
F + G+++L T + + L P G R L ++ EAL
Sbjct: 393 LSGAPSACFLSCHSRDGLEELLTLLHNTLKTLCGDPLIGSPTLTQTRHRTHLQKSIEALQ 452
Query: 515 RLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ + +L L LR L+LG+I+G EE+L IF FCIGK
Sbjct: 453 QYHEYRDVDLALA--AEGLRLGLLSLGRITGRVSPEEILDVIFRDFCIGK 500
>DICTYBASE|DDB_G0270228 [details] [associations]
symbol:gtpbp3 "GTP-binding protein 3" species:44689
"Dictyostelium discoideum" [GO:0006400 "tRNA modification"
evidence=IEA;ISS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISS] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 dictyBase:DDB_G0270228
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003924 GO:GO:0006400 HSSP:P25522
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 RefSeq:XP_646629.1
ProteinModelPortal:Q55C52 STRING:Q55C52 EnsemblProtists:DDB0267051
GeneID:8617601 KEGG:ddi:DDB_G0270228 OMA:IRISGTH
ProtClustDB:CLSZ2431449 Uniprot:Q55C52
Length = 512
Score = 367 (134.2 bits), Expect = 4.2e-37, Sum P(2) = 4.2e-37
Identities = 105/382 (27%), Positives = 181/382 (47%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXXXXXXXXWRPTSHVVEYG 153
TI + + +G V I+R+SGP A ++ ++ K R + Y
Sbjct: 27 TIYNLSSGVG--KSGVAIIRVSGPQAETVIRKLIKKSDVDKNEEIKS---RYATLSTFYN 81
Query: 154 VVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRAC-LEAGATLAQPG 212
+ +D+ + + +P S+T EDVVE HG + + A L G ++ G
Sbjct: 82 ---PKTNEQLDKGMFIWFPSPNSFTGEDVVEFHIHGGRAVIYETMEAIGLIEGTRPSEQG 138
Query: 213 EFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTE 272
EFT RAF NG++DL+Q E + L+ +QG S S+R I
Sbjct: 139 EFTKRAFENGKMDLTQVEGLSDLLDASTSFQKKIALKQMQGSISEFYLSLRKDLIRASAY 198
Query: 273 IEARLDFDD--EMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVG 330
+EA +DF D E+ P ++ ++I ++ ++ L + L+ G IAIVG PN G
Sbjct: 199 MEAFIDFGDDAELDPEIVDQSRNRIISIRDKIQQHLNDGKRGERLRDGANIAIVGPPNAG 258
Query: 331 KSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE-TDDIVEKIGVE 389
KSSL+N + + +IV+ IAGTTRD++E + + G PV + DTAG+R T+D +E G+E
Sbjct: 259 KSSLINLLTNRKASIVSPIAGTTRDIVEVILDIDGYPVIIGDTAGLRNSTNDQIEIEGIE 318
Query: 390 RSEAVALGADVIIMTVSAVDGWT--SEDSELLNRIQSNKKSTES----STPMILVINKID 443
++ +D+ + + + ++ +++ L + N++ I++ NK D
Sbjct: 319 MAKDRFNNSDIKLFLFDSFNLFSQLNQNQNLNSSFNFNEEIKNLFNFIDNETIIIFNKSD 378
Query: 444 CAPSASN--EWNKVGNSFNDHV 463
N EW + + D++
Sbjct: 379 LLKQFDNLKEWENLKLNLLDNI 400
Score = 68 (29.0 bits), Expect = 4.2e-37, Sum P(2) = 4.2e-37
Identities = 38/150 (25%), Positives = 65/150 (43%)
Query: 416 SELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQD 475
S+LL + N K E+ L +N +D ++N NS +C + I+D
Sbjct: 377 SDLLKQFD-NLKEWEN-----LKLNLLDNIKKSNNL-----NSIQSIEISCN-NNENIKD 424
Query: 476 LETAI-MKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLR 534
L + + + L +I R + L E+L R E ++ L + +LR
Sbjct: 425 LLNLLKLNLKNLFEIQDKESPLLTRLRYKQHLSDCVESLDRYLYYCEHDVVLA--SEELR 482
Query: 535 DAALALGQISGEDISEEVLSNIFGKFCIGK 564
A L++ +I+ +++L IF FCIGK
Sbjct: 483 SAILSISEITHSVNIDDLLDIIFKDFCIGK 512
>MGI|MGI:1917609 [details] [associations]
symbol:Gtpbp3 "GTP binding protein 3" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 MGI:MGI:1917609 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0006400
CTD:84705 eggNOG:COG0486 HOGENOM:HOG000200714 HOVERGEN:HBG081577
KO:K03650 OrthoDB:EOG4WH8KW InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 HSSP:Q9WYA4
EMBL:AF361482 EMBL:AY029613 EMBL:BC092042 IPI:IPI00338388
IPI:IPI00556865 RefSeq:NP_115933.2 RefSeq:XP_003689533.1
UniGene:Mm.142112 ProteinModelPortal:Q923K4 SMR:Q923K4
STRING:Q923K4 PhosphoSite:Q923K4 PaxDb:Q923K4 PRIDE:Q923K4
Ensembl:ENSMUST00000007754 Ensembl:ENSMUST00000095259
Ensembl:ENSMUST00000150969 GeneID:100862531 GeneID:70359
KEGG:mmu:100862531 KEGG:mmu:70359 GeneTree:ENSGT00390000016851
InParanoid:Q923K4 NextBio:331446 Bgee:Q923K4 CleanEx:MM_GTPBP3
Genevestigator:Q923K4 Uniprot:Q923K4
Length = 492
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 147/496 (29%), Positives = 219/496 (44%)
Query: 77 RLVADNGESEEKAGTFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVXXXXXX 136
RL A S E STI A+ S G A+ ++R SGP + G + +
Sbjct: 18 RLCARCSTSAESLVPSSTIFAL--SSGQGRCAIAVIRTSGPAS----GLALRSLTALQEP 71
Query: 137 XXXXXXW-RPTSHVVEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLR 195
R H G LDR VL P P+S+T ED VE HG +
Sbjct: 72 PPARRACLRLLRHPCS-GEPLDR-----SLVLWFP--GPQSFTGEDCVEFHVHGGPAVVS 123
Query: 196 RVLRACLEA-GATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGG 254
VL+A G A+ GEFT RAF +G+L L++ E + LI + G
Sbjct: 124 GVLQALGSVPGLRPAEAGEFTRRAFAHGKLSLTEVEGLADLIRAETEAQRRQALRQLDGE 183
Query: 255 FSSLVTSVRAKCIELLTEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYD 312
S L + L +EA +DF DD + L ++ A+ + + L A
Sbjct: 184 LSQLCQGWAKTLTKALAYVEAYIDFGEDDNLEEGVLEQADREVRALEVALGSHLRDARRG 243
Query: 313 KLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLD 372
+ L SG + + G PN GKSSL+N S+ +IV+ GTTRDV+E V + G PV L D
Sbjct: 244 QRLLSGANVVVTGPPNAGKSSLVNLLSQKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSD 303
Query: 373 TAGIRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSN--KKSTE 430
TAG+RE VE+ GV R+ AD+I+ + A D +S L+ + + +S +
Sbjct: 304 TAGLREGVGAVEQEGVRRARHRLEQADIILGVLDASDLASSSSCSFLDTVVTPLLAQSQD 363
Query: 431 SSTP-MILVINKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIM-KIVGLHQ 488
S ++L++NK D SA+ + + H+ TG G+ L A+ ++ +
Sbjct: 364 SGGQRLLLLLNKSDLL-SANAPACDI--ALPPHLLLSCHTGAGMDSLLQALKTELAAVCG 420
Query: 489 IPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDI 548
P+ G R L +AL + + + L + LR A L ++G
Sbjct: 421 DPSTGPPLLTRVRHQYHLQGCLDALGHYQLATDLALAAEA----LRQARRQLNHLTGGGG 476
Query: 549 SEEVLSNIFGKFCIGK 564
+EE+L IF FC+GK
Sbjct: 477 TEEILDLIFQDFCVGK 492
>FB|FBgn0039189 [details] [associations]
symbol:CG18528 species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0046872 GO:GO:0003924
GO:GO:0005622 GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 KO:K03650
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 GeneTree:ENSGT00390000016851 EMBL:AY071544
EMBL:AY071692 RefSeq:NP_651251.3 UniGene:Dm.5798 SMR:Q9VC87
IntAct:Q9VC87 MINT:MINT-821147 STRING:Q9VC87
EnsemblMetazoa:FBtr0084628 GeneID:42906 KEGG:dme:Dmel_CG18528
UCSC:CG18528-RA FlyBase:FBgn0039189 InParanoid:Q9VC87 OMA:LTQTRHR
OrthoDB:EOG4HQC0H GenomeRNAi:42906 NextBio:831200 Uniprot:Q9VC87
Length = 493
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 121/419 (28%), Positives = 196/419 (46%)
Query: 162 VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA-GATLAQPGEFTLRAFL 220
++D L + P S+T ED E Q HGS + +L A + G A+PGEFT RAF
Sbjct: 80 MIDRGLLLWFPGPASFTGEDSCEFQVHGSLAVIAAMLDALGKVDGLRPAEPGEFTKRAFF 139
Query: 221 NGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAKCIELLTEIEARLDF- 279
G+LDL++ E + LI G + L + R + I +EA +DF
Sbjct: 140 GGKLDLTEVEGLADLIHAETEAQRKQALLQSTGALARLYDNWRRRLIRCAAHLEAYIDFA 199
Query: 280 DDEMPPLNLNLVMDK-IHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAW 338
++E + L + K + A+ +++ L +LL+ G++ I+G PNVGKSSLLN
Sbjct: 200 EEEQIEGGIILQLGKELKAVKREIREHLSDQRQGELLRDGVRTVIIGAPNVGKSSLLNLL 259
Query: 339 SKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE-TDDIVEKIGVERSEAVALG 397
+ +IVT+ AGTTRD+IE G PV DTAG+R T D +E+ G++R++ +
Sbjct: 260 CQRSVSIVTDQAGTTRDIIETMHNFGGYPVVFSDTAGLRRYTTDSIEQEGMQRAKNCLVQ 319
Query: 398 ADVIIMTVSAVD-GWTSEDSELLNRIQSNKKSTE------SSTPMILVINKIDCAPSASN 450
+D+I++ A + + D + + S + S + LV NK D
Sbjct: 320 SDLILLLAEAKNIAQLTHDDAVAPFVDSYLGELDIPLDMCSGKRLQLVANKTDTL--TDE 377
Query: 451 EWNKVGNSFNDHVFTCAVTGQG---IQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLM 507
E ++ N +C + + LE + ++ G P N R +QL
Sbjct: 378 EHQQLDKLSNVLAISCHKPDKMPVFLGSLEKQLQELCGE---PRAENPRITNTRYRQQLE 434
Query: 508 RTKEAL-VRLKSSIEEELP-LDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
R E + + L+ + P + LR++ + +I+G E++L +F FCIGK
Sbjct: 435 RCIENIDIFLRDYRPDVYPDMAIAASKLRNSVRCIERITGHISCEDILDVVFKDFCIGK 493
>UNIPROTKB|E2RE04 [details] [associations]
symbol:GTPBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 InterPro:IPR025867 Pfam:PF12631 OMA:IRISGTH
GeneTree:ENSGT00390000016851 EMBL:AAEX03012297
Ensembl:ENSCAFT00000024419 Uniprot:E2RE04
Length = 399
Score = 361 (132.1 bits), Expect = 4.4e-33, P = 4.4e-33
Identities = 109/366 (29%), Positives = 166/366 (45%)
Query: 205 GATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRA 264
G A+ GEFT RAF +G+L L++ E + LI + G L
Sbjct: 41 GLRPAEAGEFTRRAFAHGKLSLTEVEGLADLIHAETEAQRRQALRQLDGELGHLCHGWAK 100
Query: 265 KCIELLTEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIA 322
+ L +EA +DF DD + L ++ + + L A + L+SG I
Sbjct: 101 TLTKALAHVEAYIDFGEDDNLEEGVLERANSQVRELELALSAHLRDARRGQRLRSGAHIV 160
Query: 323 IVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDI 382
+ G PN GKSSL+N S+ +IV+ GTTRDV+E V + G P L DTAG+RE
Sbjct: 161 VTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPALLSDTAGLREGAGP 220
Query: 383 VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRI---QSNKKSTESSTPMILVI 439
VE+ GV R+ AD+I+ + A D + L+ + +E+S ++LV+
Sbjct: 221 VEQEGVRRARQRLEQADLILAVLDATDLASPSSRSFLDTVVVPAGAGSPSENSQRLLLVL 280
Query: 440 NKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMK-IVGLHQIPAGGRRWAV 498
NK D P + + H+ +TG+G+ L A+ K + + P+ G
Sbjct: 281 NKSDLLPRGGPD---LSPHLPPHLLLSCLTGEGLDGLLEALRKELAEVCGDPSTGPPLLT 337
Query: 499 NQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFG 558
R L +AL K + + L + LR A L +I+G +EE+L IF
Sbjct: 338 RARHQHHLQGCLDALSHYKQTKDLALAAEA----LRLARGHLARITGGGDTEEILDIIFR 393
Query: 559 KFCIGK 564
FC+GK
Sbjct: 394 DFCVGK 399
>ASPGD|ASPL0000007078 [details] [associations]
symbol:AN6522 species:162425 "Emericella nidulans"
[GO:0070899 "mitochondrial tRNA wobble uridine modification"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0046872
GO:GO:0003924 GO:GO:0005622 EMBL:BN001301 EMBL:AACD01000109
GO:GO:0006400 eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
OrthoDB:EOG4B2X62 RefSeq:XP_664126.1 ProteinModelPortal:Q5AYV8
STRING:Q5AYV8 EnsemblFungi:CADANIAT00007294 GeneID:2870683
KEGG:ani:AN6522.2 OMA:FSEDQHF Uniprot:Q5AYV8
Length = 614
Score = 334 (122.6 bits), Expect = 9.0e-32, Sum P(2) = 9.0e-32
Identities = 113/384 (29%), Positives = 180/384 (46%)
Query: 93 STIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVF-KPVXXXXXXXXXXXXWRPTS-HVV 150
STI A+ T+ G A+ +VR+SGP V I + K + P S
Sbjct: 61 STIYALSTAPGR--AAIAVVRVSGPACVSIYQALCPKAPLPRPRVAAVRTIYDPASDEPC 118
Query: 151 EYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACL-----EAG 205
+LD G +V L +P P++ T EDV+E HG ++ VL A E
Sbjct: 119 GQADILDA-GALV---LYMP--GPKTATGEDVLEFHLHGGPAIVKSVLSAISKTSGKEHS 172
Query: 206 ATLAQPGEFTLRAFLNGRLDLSQAENVEKLISXXXXXXXXXXXXGIQGGFSSLVTSVRAK 265
A+PGEFT RAF+N RL+L Q E + ++ G S R +
Sbjct: 173 VRYAEPGEFTRRAFMNDRLELPQIEALGDTLAADTEQQRRLAVRGASDALSKRYEKWRQQ 232
Query: 266 CIELLTEIEARLDF------DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGL 319
+ E+EA +DF D+ L L+ V ++ A+S+ + ++ A+ +L++SG+
Sbjct: 233 LLYARGELEALIDFSEDQYFDESSDDLVLS-VSTQVRALSRQIALHIQNASKGELMRSGI 291
Query: 320 QIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRET 379
++A++G PN GKSSLLN E AIV+ GTTRD+++ + + G L D AGIR
Sbjct: 292 KVALLGAPNAGKSSLLNRIVGREAAIVSTEEGTTRDIVDVGIDLGGWYCKLGDMAGIRSE 351
Query: 380 DDI------------VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELL-----NRI 422
VEK G+ R+ A A+ +DV+++ +S +G + E + + +
Sbjct: 352 PSSNSPGGASLVIGSVEKEGIRRARARAMASDVVVVVISVEEG-SDEGAPFRLAMEPDVV 410
Query: 423 QSNKKSTESSTPMILVINKIDCAP 446
+ + + +I+ INK D P
Sbjct: 411 DAANECVRAGKQIIVAINKCDRLP 434
Score = 78 (32.5 bits), Expect = 9.0e-32, Sum P(2) = 9.0e-32
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 519 SIEEELPLDFWTIDLRDAALALGQISGEDIS---EEVLSNIFGKFCIGK 564
S+E E+ + LR AA AL I+G+ S E+VL +F KFC+GK
Sbjct: 566 SVESEVDIVVAAEHLRYAADALASITGKGESGDVEDVLGVVFEKFCVGK 614
>TIGR_CMR|CHY_1919 [details] [associations]
symbol:CHY_1919 "GTP-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0017111 eggNOG:COG1160 HOGENOM:HOG000242861
KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR RefSeq:YP_360738.1 ProteinModelPortal:Q3AAU6
STRING:Q3AAU6 GeneID:3728232 KEGG:chy:CHY_1919 PATRIC:21276929
BioCyc:CHYD246194:GJCN-1918-MONOMER Uniprot:Q3AAU6
Length = 440
Score = 226 (84.6 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 55/149 (36%), Positives = 84/149 (56%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
++IA+VGRPNVGKSSL+NA ER +V++I GTTRD I+ + G P L+DTAG+R
Sbjct: 177 VKIAVVGRPNVGKSSLVNALLGEERVVVSDIPGTTRDAIDTPMWYQGKPYLLIDTAGMRR 236
Query: 379 TDDI---VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
I +E+ V RS ADV ++ +SA +G T +D ++ I E +
Sbjct: 237 KSRIEEDLERYSVNRSIKAIRRADVALLVISAEEGVTEQDKKIAGLIH------EYGRGV 290
Query: 436 ILVINKIDCAPSASNEWNKVGNSFNDHVF 464
I+V+NK D + K + + +H++
Sbjct: 291 IIVVNKWDLIEKDA----KTADRYKEHIY 315
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/166 (31%), Positives = 80/166 (48%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
+AIVGRPNVGKS+L N AIV + G TRD + + G L+DT G+ ++
Sbjct: 6 VAIVGRPNVGKSTLFNRIIGERIAIVEDTPGVTRDRLYSEAEWQGKVFDLIDTGGLEFSE 65
Query: 381 DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVIN 440
D++ E+ E AD+I+ + +G TS D + ++ + K P+ILV N
Sbjct: 66 DLITTKVREQIEKAINEADLILFVCDSREGITSTDEAVAKNLRKSDK------PVILVAN 119
Query: 441 KID--CAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDL-ETAIMKI 483
K+D P A N ++ + A G + DL + I K+
Sbjct: 120 KVDDYLNPPA-NFYDLYRLGLGEPFPVSAANGTNVGDLLDLVISKL 164
>UNIPROTKB|Q83C83 [details] [associations]
symbol:der "GTPase Der" species:227377 "Coxiella burnetii
RSA 493" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 216 (81.1 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 69/195 (35%), Positives = 95/195 (48%)
Query: 298 MSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVI 357
M+Q +EN E + + G++IA++GRPNVGKS+L+N ER IV + GTTRD I
Sbjct: 156 MTQVLENLPEEKEVIEK-EVGIKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSI 214
Query: 358 EASVTVCGVPVTLLDTAGIR---ETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSE 414
TL+DTAGIR + D VEK + +S ADV+I + A G T +
Sbjct: 215 YIPFARNDENYTLIDTAGIRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQ 274
Query: 415 DSELLNRIQSNKKSTESSTPMILVINKIDCA--PSASNEWNKVGN-----SFNDHVFTCA 467
D LLNRI E+ +I+ +NK D N N + F F A
Sbjct: 275 DLRLLNRI------VEAGVSLIIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISA 328
Query: 468 VTGQGIQDLETAIMK 482
+ G G+ L AI +
Sbjct: 329 LHGTGVGKLFRAIQE 343
Score = 196 (74.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 53/165 (32%), Positives = 87/165 (52%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
IAIVGRPNVGKS+L N +KS A+V ++ G TRD T+ + L+DT G+ +T+
Sbjct: 5 IAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGLVDTE 64
Query: 381 DI-VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
+ V + + E +D I+ V A G D + R++ K + L +
Sbjct: 65 NKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKK------IFLAV 118
Query: 440 NKIDCAPSA--SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMK 482
NK D A +A +++ K+G F + A +G+G++DL T +++
Sbjct: 119 NKADRARAAVVQSDFYKLG--FGEPYVIAAASGRGVKDLMTQVLE 161
>TIGR_CMR|CBU_1245 [details] [associations]
symbol:CBU_1245 "GTP-binding protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 216 (81.1 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 69/195 (35%), Positives = 95/195 (48%)
Query: 298 MSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVI 357
M+Q +EN E + + G++IA++GRPNVGKS+L+N ER IV + GTTRD I
Sbjct: 156 MTQVLENLPEEKEVIEK-EVGIKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSI 214
Query: 358 EASVTVCGVPVTLLDTAGIR---ETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSE 414
TL+DTAGIR + D VEK + +S ADV+I + A G T +
Sbjct: 215 YIPFARNDENYTLIDTAGIRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQ 274
Query: 415 DSELLNRIQSNKKSTESSTPMILVINKIDCA--PSASNEWNKVGN-----SFNDHVFTCA 467
D LLNRI E+ +I+ +NK D N N + F F A
Sbjct: 275 DLRLLNRI------VEAGVSLIIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISA 328
Query: 468 VTGQGIQDLETAIMK 482
+ G G+ L AI +
Sbjct: 329 LHGTGVGKLFRAIQE 343
Score = 196 (74.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 53/165 (32%), Positives = 87/165 (52%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
IAIVGRPNVGKS+L N +KS A+V ++ G TRD T+ + L+DT G+ +T+
Sbjct: 5 IAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGLVDTE 64
Query: 381 DI-VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
+ V + + E +D I+ V A G D + R++ K + L +
Sbjct: 65 NKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKK------IFLAV 118
Query: 440 NKIDCAPSA--SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMK 482
NK D A +A +++ K+G F + A +G+G++DL T +++
Sbjct: 119 NKADRARAAVVQSDFYKLG--FGEPYVIAAASGRGVKDLMTQVLE 161
>UNIPROTKB|Q3Z6P5 [details] [associations]
symbol:der "GTPase Der" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 204 (76.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 55/177 (31%), Positives = 93/177 (52%)
Query: 317 SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGI 376
+ +++A+VGR NVGKS+LLN + ER+IV+ I GTTRD I+ + G V L+DTAGI
Sbjct: 178 NSVKLALVGRTNVGKSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNFNGTNVLLIDTAGI 237
Query: 377 RETDDI---VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESST 433
R + VEK V R+ AD++++ + + T++D+ + ++ K
Sbjct: 238 RRRGKVESGVEKYSVLRALKAVDRADIVLLVMDTEELVTAQDTHIAGYVRDTAKG----- 292
Query: 434 PMILVINKIDCAPSASN-EWNKVGNS---FNDH---VFTCAVTGQGIQDLETAIMKI 483
+I+++NK D E + S F D+ +F TG+G+ + +K+
Sbjct: 293 -IIIILNKWDLGKGQDKAEVTQTIQSRFKFLDYAPILFVSGKTGRGVDTIIPMALKV 348
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 50/164 (30%), Positives = 83/164 (50%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIR-ET 379
IAIVGR NVGKS+LLN + AI ++ GTTRD + +V+ + ++DT G+ +
Sbjct: 8 IAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRRLIMVDTGGLDPDL 67
Query: 380 DDIV-EKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILV 438
+ I+ +++ ++ S A+ AD++++ V G + D E+ + I+ K P+ILV
Sbjct: 68 ESIIGQQVNIQISLAIK-EADLVLLVVDVKAGLITPDYEMADIIRRTGK------PVILV 120
Query: 439 INKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMK 482
NK D F + A G GI DL +++
Sbjct: 121 ANKADNLKMGQEAAEFYSLGFGEPSVISAFHGSGISDLMDRVLE 164
>TIGR_CMR|DET_1395 [details] [associations]
symbol:DET_1395 "GTP-binding protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 204 (76.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 55/177 (31%), Positives = 93/177 (52%)
Query: 317 SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGI 376
+ +++A+VGR NVGKS+LLN + ER+IV+ I GTTRD I+ + G V L+DTAGI
Sbjct: 178 NSVKLALVGRTNVGKSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNFNGTNVLLIDTAGI 237
Query: 377 RETDDI---VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESST 433
R + VEK V R+ AD++++ + + T++D+ + ++ K
Sbjct: 238 RRRGKVESGVEKYSVLRALKAVDRADIVLLVMDTEELVTAQDTHIAGYVRDTAKG----- 292
Query: 434 PMILVINKIDCAPSASN-EWNKVGNS---FNDH---VFTCAVTGQGIQDLETAIMKI 483
+I+++NK D E + S F D+ +F TG+G+ + +K+
Sbjct: 293 -IIIILNKWDLGKGQDKAEVTQTIQSRFKFLDYAPILFVSGKTGRGVDTIIPMALKV 348
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 50/164 (30%), Positives = 83/164 (50%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIR-ET 379
IAIVGR NVGKS+LLN + AI ++ GTTRD + +V+ + ++DT G+ +
Sbjct: 8 IAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRRLIMVDTGGLDPDL 67
Query: 380 DDIV-EKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILV 438
+ I+ +++ ++ S A+ AD++++ V G + D E+ + I+ K P+ILV
Sbjct: 68 ESIIGQQVNIQISLAIK-EADLVLLVVDVKAGLITPDYEMADIIRRTGK------PVILV 120
Query: 439 INKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMK 482
NK D F + A G GI DL +++
Sbjct: 121 ANKADNLKMGQEAAEFYSLGFGEPSVISAFHGSGISDLMDRVLE 164
>TAIR|locus:2099277 [details] [associations]
symbol:emb2738 "embryo defective 2738" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG1160 HOGENOM:HOG000242861 OMA:IEWISSS Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
EMBL:BT046184 IPI:IPI00529367 RefSeq:NP_187815.2 UniGene:At.21430
ProteinModelPortal:B5X565 SMR:B5X565 STRING:B5X565 PaxDb:B5X565
PRIDE:B5X565 EnsemblPlants:AT3G12080.1 GeneID:820382
KEGG:ath:AT3G12080 TAIR:At3g12080 PhylomeDB:B5X565
ProtClustDB:CLSN2918072 Genevestigator:B5X565 Uniprot:B5X565
Length = 663
Score = 205 (77.2 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 51/138 (36%), Positives = 78/138 (56%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVT-VCGVPVTLLDTAGIRET 379
IAI+GRPNVGKSS+LNA + +R IV+ ++GTTRD I+A T G L+DTAGIR+
Sbjct: 371 IAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAGIRKK 430
Query: 380 DDIV------EKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESST 433
+ E + V R+ +DV+ + + A+ T +D ++ RI+ K
Sbjct: 431 SSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIEREGKGC---- 486
Query: 434 PMILVINKIDCAPSASNE 451
++V+NK D P+ + E
Sbjct: 487 --LVVVNKWDTIPNKNQE 502
>DICTYBASE|DDB_G0279259 [details] [associations]
symbol:DDB_G0279259 "putative GTP-binding protein"
species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326
dictyBase:DDB_G0279259 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AAFI02000030 eggNOG:COG1160 KO:K03977 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
RefSeq:XP_641756.1 ProteinModelPortal:Q54X21 STRING:Q54X21
EnsemblProtists:DDB0205682 GeneID:8621954 KEGG:ddi:DDB_G0279259
InParanoid:Q54X21 Uniprot:Q54X21
Length = 841
Score = 206 (77.6 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 67/209 (32%), Positives = 112/209 (53%)
Query: 268 ELLTEIEARLDFDDEMPPL-----NLNLVMDKIHAMSQDVENALETANYDKLLQSG-LQI 321
E+ T+I RL F + +P N++ + + I + ++ +LE D L+ G ++I
Sbjct: 291 EMKTQI-TRLGFGEPIPFSAHHGDNVHSMFELILSQFPHMDLSLEKLEED--LKPGPIRI 347
Query: 322 AIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGV-PVTLLDTAGIRETD 380
+IVG+PN GKSSLLN + ER+IV++I GTT D ++ + ++L+DTAGIR
Sbjct: 348 SIVGQPNAGKSSLLNKIIEEERSIVSDIPGTTHDPVDCNFLWRDTHELSLIDTAGIRRRS 407
Query: 381 DIVEKIGVERSEAV-ALGA----DVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
KIG+E+S + AL A V+ + + A G T +D ++ + + N+KS M
Sbjct: 408 --THKIGLEKSSVLWALKAIEKSHVVFIVIDATIGITEQDLKIASFVVENRKS------M 459
Query: 436 ILVINKIDCAPSASNEWNKVGNSFNDHVF 464
I+++NK D + K+ + H F
Sbjct: 460 IIIVNKWDLYLKNKHATQKITDKLFFHDF 488
Score = 162 (62.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 43/128 (33%), Positives = 68/128 (53%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSER-AIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGI--- 376
IAI+G+PNVGKS++ N + +R A+V EI GTTRD + G L+DT G+
Sbjct: 155 IAIIGKPNVGKSTIFNRIIEGQRRALVEEIPGTTRDRYYGEGFLYGREFILVDTGGLIGE 214
Query: 377 -RETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
+E D + + +++E AD I+ + G TS D EL ++S ++ P+
Sbjct: 215 SKEDKDQFQGVIQDQAEIAMEEADAILFVLDYKSGLTSIDKELARMLRSKRQKL--GKPI 272
Query: 436 ILVINKID 443
+ +NK D
Sbjct: 273 YIGVNKAD 280
>UNIPROTKB|Q8EC36 [details] [associations]
symbol:der "GTPase Der" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_718862.1 ProteinModelPortal:Q8EC36
GeneID:1170993 KEGG:son:SO_3308 PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 191 (72.3 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 58/185 (31%), Positives = 92/185 (49%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
+A+VGRPNVGKS+L N +++ A+V + G TRD + G ++DT GI T+
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDGTE 64
Query: 381 DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVIN 440
+ +E E+S A ADV++ A G T+ D + ++S +K+T +V N
Sbjct: 65 EGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTT------FVVAN 118
Query: 441 KIDC--APSASNEWNKVGNSFNDHVFTCAVTGQGIQDL-ETAIMKIVGLHQIPAGGRRWA 497
KID A SA E+ +G + A G+G+ ++ E A+ I G
Sbjct: 119 KIDGIDADSACAEFWSLG--LGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIERQGEEEE 176
Query: 498 VNQRQ 502
V++RQ
Sbjct: 177 VDERQ 181
Score = 165 (63.1 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 44/147 (29%), Positives = 76/147 (51%)
Query: 300 QDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEA 359
Q E E A +L +++AI+G+PNVGKS+L N ER +V + GTTRD I
Sbjct: 181 QYTEEEAE-AEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYI 239
Query: 360 SVTVCGVPVTLLDTAGIR---ETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDS 416
+ G ++DTAG+R + +++EK V ++ A+V+++ + A +G +D
Sbjct: 240 PMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQDL 299
Query: 417 ELLNRIQSNKKSTESSTPMILVINKID 443
LL + + +++ +NK D
Sbjct: 300 GLLGF------ALNAGRALVIAVNKWD 320
>TIGR_CMR|SO_3308 [details] [associations]
symbol:SO_3308 "GTP-binding protein EngA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 RefSeq:NP_718862.1
ProteinModelPortal:Q8EC36 GeneID:1170993 KEGG:son:SO_3308
PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 191 (72.3 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 58/185 (31%), Positives = 92/185 (49%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
+A+VGRPNVGKS+L N +++ A+V + G TRD + G ++DT GI T+
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDGTE 64
Query: 381 DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVIN 440
+ +E E+S A ADV++ A G T+ D + ++S +K+T +V N
Sbjct: 65 EGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTT------FVVAN 118
Query: 441 KIDC--APSASNEWNKVGNSFNDHVFTCAVTGQGIQDL-ETAIMKIVGLHQIPAGGRRWA 497
KID A SA E+ +G + A G+G+ ++ E A+ I G
Sbjct: 119 KIDGIDADSACAEFWSLG--LGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIERQGEEEE 176
Query: 498 VNQRQ 502
V++RQ
Sbjct: 177 VDERQ 181
Score = 165 (63.1 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 44/147 (29%), Positives = 76/147 (51%)
Query: 300 QDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEA 359
Q E E A +L +++AI+G+PNVGKS+L N ER +V + GTTRD I
Sbjct: 181 QYTEEEAE-AEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYI 239
Query: 360 SVTVCGVPVTLLDTAGIR---ETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDS 416
+ G ++DTAG+R + +++EK V ++ A+V+++ + A +G +D
Sbjct: 240 PMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQDL 299
Query: 417 ELLNRIQSNKKSTESSTPMILVINKID 443
LL + + +++ +NK D
Sbjct: 300 GLLGF------ALNAGRALVIAVNKWD 320
>TIGR_CMR|CJE_0435 [details] [associations]
symbol:CJE_0435 "GTPase family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0042254 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_178454.1 HSSP:Q9X1F8
ProteinModelPortal:Q5HW81 STRING:Q5HW81 GeneID:3231197
KEGG:cjr:CJE0435 PATRIC:20042570 OMA:YLENTYR
BioCyc:CJEJ195099:GJC0-440-MONOMER Uniprot:Q5HW81
Length = 460
Score = 190 (71.9 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 53/169 (31%), Positives = 88/169 (52%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
I ++G+PNVGKSSL N ++ AI ++I+GTTRD + + + L+D+ G+ E+D
Sbjct: 4 IILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQIHIHSKKAMLIDSGGLDESD 63
Query: 381 DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVIN 440
++ + + + + VA +D+I+ V DG + D E S KK + P+ LVIN
Sbjct: 64 ELFKNVK-KNTLKVAKESDIILYLV---DGKLAPDDEDRQFFYSLKKLGK---PIALVIN 116
Query: 441 KIDCAPSASNEWNKVGNSFNDHVFTCAVTGQ-GIQDLETAIMKIVGLHQ 488
K+D W + N +F +VT G+ +L + K LH+
Sbjct: 117 KVDNKKDEERAW-EFANFGVKEIFNLSVTHNVGLDELYEWLEKF--LHE 162
Score = 186 (70.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 45/130 (34%), Positives = 74/130 (56%)
Query: 316 QSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAG 375
Q+ +++ IVGR NVGKSSLLNA K ER++V+ IAGTT D + SV + +DTAG
Sbjct: 193 QNHIRVGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESVVHKDKVIEFVDTAG 252
Query: 376 IRETDDI--VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESST 433
IR+ I +E+ + R+E + + + ++ + A +G+ D + + +
Sbjct: 253 IRKRGKIQGLERFALNRTEKILSHSQIALLVLDAHEGFNELDERIAGLVAKHYLG----- 307
Query: 434 PMILVINKID 443
+I+V+NK D
Sbjct: 308 -VIIVLNKWD 316
>UNIPROTKB|P0A6P5 [details] [associations]
symbol:der "50S ribosomal subunit stability factor"
species:83333 "Escherichia coli K-12" [GO:0005829 "cytosol"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IMP] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0043022 GO:GO:0000027
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 PIR:F65027 RefSeq:NP_417006.2
RefSeq:YP_490739.1 ProteinModelPortal:P0A6P5 SMR:P0A6P5
DIP:DIP-48272N IntAct:P0A6P5 PaxDb:P0A6P5 PRIDE:P0A6P5
EnsemblBacteria:EBESCT00000000698 EnsemblBacteria:EBESCT00000017218
GeneID:12934159 GeneID:946983 KEGG:ecj:Y75_p2464 KEGG:eco:b2511
PATRIC:32120415 EchoBASE:EB3959 EcoGene:EG14207
BioCyc:EcoCyc:G7319-MONOMER BioCyc:ECOL316407:JW5403-MONOMER
BioCyc:MetaCyc:G7319-MONOMER Genevestigator:P0A6P5 Uniprot:P0A6P5
Length = 490
Score = 189 (71.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 53/145 (36%), Positives = 81/145 (55%)
Query: 303 ENALETANYDKLLQS-GLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASV 361
EN E D QS +++AIVGRPNVGKS+L N ER +V ++ GTTRD I +
Sbjct: 186 ENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPM 245
Query: 362 TVCGVPVTLLDTAGIRETD---DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSEL 418
G L+DTAG+R+ D VEK V ++ A+V+++ + A +G + +D L
Sbjct: 246 ERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSL 305
Query: 419 LNRIQSNKKSTESSTPMILVINKID 443
L I ++ +S +++V+NK D
Sbjct: 306 LGFILNSGRS------LVIVVNKWD 324
Score = 167 (63.8 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 44/123 (35%), Positives = 62/123 (50%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
+A+VGRPNVGKS+L N +++ A+V + G TRD + G +DT GI T+
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGIDGTE 64
Query: 381 DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVIN 440
D VE E+S ADV++ V A G D + ++S +K P LV N
Sbjct: 65 DGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREK------PTFLVAN 118
Query: 441 KID 443
K D
Sbjct: 119 KTD 121
>TIGR_CMR|CPS_4121 [details] [associations]
symbol:CPS_4121 "GTP-binding protein Era" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 eggNOG:COG1159 KO:K03595 TIGRFAMs:TIGR00436
OMA:KVAKDWQ HOGENOM:HOG000245597 RefSeq:YP_270776.1
ProteinModelPortal:Q47WP6 SMR:Q47WP6 STRING:Q47WP6 GeneID:3521211
KEGG:cps:CPS_4121 PATRIC:21471105
BioCyc:CPSY167879:GI48-4134-MONOMER Uniprot:Q47WP6
Length = 305
Score = 183 (69.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 65/225 (28%), Positives = 109/225 (48%)
Query: 317 SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGI 376
+GL IAIVGRPNVGKS+LLNA + +I ++ TTR I +T L+DT G+
Sbjct: 10 AGL-IAIVGRPNVGKSTLLNALLGQKISITSKKPQTTRHRILGILTEENRQAVLVDTPGL 68
Query: 377 R-ETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
E + ++ + R+ + ++ +IM + WT +D +L++++ +S TP
Sbjct: 69 HTEEKRAINRL-MNRAASSSIAEVELIMFLVEGTHWTKDDELVLSKVK------QSGTPC 121
Query: 436 ILVINKIDCAPSASN---EWNKVG--NSFNDHVFTCAVTGQGIQDLETAIMKIV--GLHQ 488
ILV+NK D P K+G + F D V CA G G+ + + + G+
Sbjct: 122 ILVVNKTDNIPDKDELLPHLQKLGAMHDFRDIVPICATKGHGVDTIRQLCLTSLPEGVFW 181
Query: 489 IPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDL 533
P ++ +++R K L+R +ELP T+++
Sbjct: 182 FPEDHITDRSSRFMASEIIREK--LIRFTG---DELPYSI-TVEI 220
>UNIPROTKB|Q81SW9 [details] [associations]
symbol:der "GTPase Der" species:1392 "Bacillus anthracis"
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0042254 RefSeq:NP_843976.1
RefSeq:YP_018148.1 RefSeq:YP_027683.1 ProteinModelPortal:Q81SW9
SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 44/141 (31%), Positives = 77/141 (54%)
Query: 306 LETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCG 365
+E YD + ++ +++GRPNVGKSSL+NA ER IV+ +AGTTRD ++ + G
Sbjct: 166 IEEDGYD---EDTIRFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDG 222
Query: 366 VPVTLLDTAGIRETDDI---VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRI 422
++DTAG+R+ + EK V R+ +DV+++ + +G +D ++
Sbjct: 223 KDYVIIDTAGMRKKGKVYESTEKYSVLRALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282
Query: 423 QSNKKSTESSTPMILVINKID 443
+S +++V+NK D
Sbjct: 283 H------DSGRAVVIVVNKWD 297
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 52/158 (32%), Positives = 80/158 (50%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
IAIVGRPNVGKS++ N +IV +I G TRD I ++ ++DT GI D
Sbjct: 6 IAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGIDIGD 65
Query: 381 D-IVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRI-QSNKKSTESSTPMILV 438
+ + +I +++E ADVII + DG T+ D E+ + +SNK P++L
Sbjct: 66 EPFLTQIR-QQAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRSNK-------PVVLA 117
Query: 439 INKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDL 476
+NK+D S+ ++ F + G G+ DL
Sbjct: 118 VNKVDNPEMRSDIYDFYALGFGEPFPISGTHGLGLGDL 155
>TIGR_CMR|BA_1525 [details] [associations]
symbol:BA_1525 "GTPase family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0042254
RefSeq:NP_843976.1 RefSeq:YP_018148.1 RefSeq:YP_027683.1
ProteinModelPortal:Q81SW9 SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 44/141 (31%), Positives = 77/141 (54%)
Query: 306 LETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCG 365
+E YD + ++ +++GRPNVGKSSL+NA ER IV+ +AGTTRD ++ + G
Sbjct: 166 IEEDGYD---EDTIRFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDG 222
Query: 366 VPVTLLDTAGIRETDDI---VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRI 422
++DTAG+R+ + EK V R+ +DV+++ + +G +D ++
Sbjct: 223 KDYVIIDTAGMRKKGKVYESTEKYSVLRALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282
Query: 423 QSNKKSTESSTPMILVINKID 443
+S +++V+NK D
Sbjct: 283 H------DSGRAVVIVVNKWD 297
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 52/158 (32%), Positives = 80/158 (50%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
IAIVGRPNVGKS++ N +IV +I G TRD I ++ ++DT GI D
Sbjct: 6 IAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGIDIGD 65
Query: 381 D-IVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRI-QSNKKSTESSTPMILV 438
+ + +I +++E ADVII + DG T+ D E+ + +SNK P++L
Sbjct: 66 EPFLTQIR-QQAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRSNK-------PVVLA 117
Query: 439 INKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDL 476
+NK+D S+ ++ F + G G+ DL
Sbjct: 118 VNKVDNPEMRSDIYDFYALGFGEPFPISGTHGLGLGDL 155
>UNIPROTKB|Q47WC5 [details] [associations]
symbol:der "GTPase Der" species:167879 "Colwellia
psychrerythraea 34H" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 188 (71.2 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 47/128 (36%), Positives = 72/128 (56%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
+++AI+GRPNVGKS+L N ER +V ++ GTTRD + + G TL+DTAGIR
Sbjct: 213 IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAGIRR 272
Query: 379 ---TDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
D+VEK V ++ A+V ++ + A +G + +D LL I E+ +
Sbjct: 273 RKNVTDVVEKYSVIKTLRAIEDANVCLLIIDAQEGISDQDLSLLGFI------LEAGRSL 326
Query: 436 ILVINKID 443
+L +NK D
Sbjct: 327 VLAVNKWD 334
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 52/161 (32%), Positives = 79/161 (49%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
+A+VGRPNVGKS+L N ++S A+V + G TRD V P ++DT GI +
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGINGDE 64
Query: 381 DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVIN 440
++ E+S AD ++ V A DG T+ D + + ++ K + +V N
Sbjct: 65 QGIDVKMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKK------IFVVAN 118
Query: 441 KIDC--APSASNEWNKVGNSFNDHVFTCAVT-GQGIQDLET 478
KID SA E+ +G +HV A G+G+ L T
Sbjct: 119 KIDGIHGDSAVAEFYSLG--LGEHVHQIAAAHGRGVTQLLT 157
>TIGR_CMR|CPS_4247 [details] [associations]
symbol:CPS_4247 "GTP-binding protein EngA" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 188 (71.2 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 47/128 (36%), Positives = 72/128 (56%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
+++AI+GRPNVGKS+L N ER +V ++ GTTRD + + G TL+DTAGIR
Sbjct: 213 IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAGIRR 272
Query: 379 ---TDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
D+VEK V ++ A+V ++ + A +G + +D LL I E+ +
Sbjct: 273 RKNVTDVVEKYSVIKTLRAIEDANVCLLIIDAQEGISDQDLSLLGFI------LEAGRSL 326
Query: 436 ILVINKID 443
+L +NK D
Sbjct: 327 VLAVNKWD 334
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 52/161 (32%), Positives = 79/161 (49%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
+A+VGRPNVGKS+L N ++S A+V + G TRD V P ++DT GI +
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGINGDE 64
Query: 381 DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVIN 440
++ E+S AD ++ V A DG T+ D + + ++ K + +V N
Sbjct: 65 QGIDVKMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKK------IFVVAN 118
Query: 441 KIDC--APSASNEWNKVGNSFNDHVFTCAVT-GQGIQDLET 478
KID SA E+ +G +HV A G+G+ L T
Sbjct: 119 KIDGIHGDSAVAEFYSLG--LGEHVHQIAAAHGRGVTQLLT 157
>UNIPROTKB|Q2GDM7 [details] [associations]
symbol:NSE_0536 "GTPase Der" species:222891 "Neorickettsia
sennetsu str. Miyayama" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 184 (69.8 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 56/155 (36%), Positives = 80/155 (51%)
Query: 302 VENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASV 361
+ L+T Q +++AI+G+PNVGKSSL+N + +R +V IAGTTRD I +
Sbjct: 157 IPEQLDTPKNGSEEQRRIKVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDEL 216
Query: 362 TVCGVPVTLLDTAGIRETD---DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSE--DS 416
L+DTAG+R+ D +EKI R+ + +DV+I + +T E D
Sbjct: 217 QWKCTTFELVDTAGLRKKQRVTDGLEKICNSRALRTSAESDVVIFMCD-ISNFTLERQDF 275
Query: 417 ELLNRIQSNKKSTESSTPMILVINKIDCAPSASNE 451
L+NRI E PMILV NK D + E
Sbjct: 276 LLMNRI------LEQGKPMILVGNKKDAVDAIELE 304
Score = 155 (59.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 43/131 (32%), Positives = 73/131 (55%)
Query: 315 LQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVC-GVPVTLLDT 373
+QS +++IVG+ NVGKS+L N +K +R+I + G TRDV+ +++ G + LLDT
Sbjct: 1 MQSTFRVSIVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDT 60
Query: 374 AGIRETDDIVEKIGVERSEAVALGADVIIMTV-SAVDGWTSEDSELLNRIQSNKKSTESS 432
AG VER+E +D+++ + + +D SED N ++ N +++
Sbjct: 61 AGFNPQHPET----VERTEYAIKESDMVLFVIDNKID---SEDMLFANWLRRNAGNSK-- 111
Query: 433 TPMILVINKID 443
++LV NK D
Sbjct: 112 --IVLVCNKSD 120
>TIGR_CMR|NSE_0536 [details] [associations]
symbol:NSE_0536 "putative GTP-binding protein EngA"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0005525
"GTP binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 184 (69.8 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 56/155 (36%), Positives = 80/155 (51%)
Query: 302 VENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASV 361
+ L+T Q +++AI+G+PNVGKSSL+N + +R +V IAGTTRD I +
Sbjct: 157 IPEQLDTPKNGSEEQRRIKVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDEL 216
Query: 362 TVCGVPVTLLDTAGIRETD---DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSE--DS 416
L+DTAG+R+ D +EKI R+ + +DV+I + +T E D
Sbjct: 217 QWKCTTFELVDTAGLRKKQRVTDGLEKICNSRALRTSAESDVVIFMCD-ISNFTLERQDF 275
Query: 417 ELLNRIQSNKKSTESSTPMILVINKIDCAPSASNE 451
L+NRI E PMILV NK D + E
Sbjct: 276 LLMNRI------LEQGKPMILVGNKKDAVDAIELE 304
Score = 155 (59.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 43/131 (32%), Positives = 73/131 (55%)
Query: 315 LQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVC-GVPVTLLDT 373
+QS +++IVG+ NVGKS+L N +K +R+I + G TRDV+ +++ G + LLDT
Sbjct: 1 MQSTFRVSIVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDT 60
Query: 374 AGIRETDDIVEKIGVERSEAVALGADVIIMTV-SAVDGWTSEDSELLNRIQSNKKSTESS 432
AG VER+E +D+++ + + +D SED N ++ N +++
Sbjct: 61 AGFNPQHPET----VERTEYAIKESDMVLFVIDNKID---SEDMLFANWLRRNAGNSK-- 111
Query: 433 TPMILVINKID 443
++LV NK D
Sbjct: 112 --IVLVCNKSD 120
>UNIPROTKB|Q74AX4 [details] [associations]
symbol:der "GTPase Der" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 57/181 (31%), Positives = 86/181 (47%)
Query: 316 QSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAG 375
++ +IA+VGRPNVGKSSL+N ER + GTTRD ++ T L+DTAG
Sbjct: 174 RNATKIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNKKRYLLIDTAG 233
Query: 376 IR---ETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESS 432
IR +T +EK V S ADV+++ ++A +G T +D + + E+
Sbjct: 234 IRRKGKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGY------AFEAG 287
Query: 433 TPMILVINKIDCAP----SASNEWNKVGNSFN-----DHVFTCAVTGQGIQDLETAIMKI 483
I V+NK D S +K+ F VF A TGQ + + + K+
Sbjct: 288 KACIFVVNKWDAIEKDNSSVGRFVDKIRTEFKYLAFVPIVFVSAKTGQRLNRIMEEVEKV 347
Query: 484 V 484
+
Sbjct: 348 M 348
Score = 173 (66.0 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 53/160 (33%), Positives = 83/160 (51%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIR-ET 379
+AIVGRPNVGKS+L N +AIV ++ G TRD +VT VP L+DT G E+
Sbjct: 6 VAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGFEPES 65
Query: 380 DDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
D + + E+S ADVI+ + G D E++ ++ K P+ V+
Sbjct: 66 SDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDK------PVFFVV 119
Query: 440 NKID--CAPSASNEWNKVGNSFNDHVFTCAVT-GQGIQDL 476
NK+D A++E+ +G D++ T + +G++DL
Sbjct: 120 NKVDGETLEVAASEFYSLGV---DNLLTISAEHNRGVRDL 156
>TIGR_CMR|GSU_2225 [details] [associations]
symbol:GSU_2225 "GTP-binding protein Era, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 57/181 (31%), Positives = 86/181 (47%)
Query: 316 QSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAG 375
++ +IA+VGRPNVGKSSL+N ER + GTTRD ++ T L+DTAG
Sbjct: 174 RNATKIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNKKRYLLIDTAG 233
Query: 376 IR---ETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESS 432
IR +T +EK V S ADV+++ ++A +G T +D + + E+
Sbjct: 234 IRRKGKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGY------AFEAG 287
Query: 433 TPMILVINKIDCAP----SASNEWNKVGNSFN-----DHVFTCAVTGQGIQDLETAIMKI 483
I V+NK D S +K+ F VF A TGQ + + + K+
Sbjct: 288 KACIFVVNKWDAIEKDNSSVGRFVDKIRTEFKYLAFVPIVFVSAKTGQRLNRIMEEVEKV 347
Query: 484 V 484
+
Sbjct: 348 M 348
Score = 173 (66.0 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 53/160 (33%), Positives = 83/160 (51%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIR-ET 379
+AIVGRPNVGKS+L N +AIV ++ G TRD +VT VP L+DT G E+
Sbjct: 6 VAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGFEPES 65
Query: 380 DDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
D + + E+S ADVI+ + G D E++ ++ K P+ V+
Sbjct: 66 SDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDK------PVFFVV 119
Query: 440 NKID--CAPSASNEWNKVGNSFNDHVFTCAVT-GQGIQDL 476
NK+D A++E+ +G D++ T + +G++DL
Sbjct: 120 NKVDGETLEVAASEFYSLGV---DNLLTISAEHNRGVRDL 156
>UNIPROTKB|Q9KTW7 [details] [associations]
symbol:der "GTPase Der" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 177 (67.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 67/243 (27%), Positives = 114/243 (46%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
+A+VGRPNVGKS+L N +++ A+V + G TRD + ++DT GI ++
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64
Query: 381 DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVIN 440
+ VE ++S A ADV++ V G T D + ++ +K P ILV+N
Sbjct: 65 EGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEK------PAILVVN 118
Query: 441 KIDC--APSASNEWNKVGNSFNDHVFTCAVT-GQGIQDLETAIMKIVGLHQIPAGGRRWA 497
K+D A +AS E+ ++G D ++ A G+G+ L ++ Q+ +
Sbjct: 119 KVDGIDADAASAEFWQLGM---DQMYQIAAAHGRGVGALIDRVLNPFA-EQMES------ 168
Query: 498 VNQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSN-I 556
Q Q E L ++ EEE ++ L+D + L I ++ + L+N I
Sbjct: 169 -EQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKR--LQDLPIKLAIIGRPNVGKSTLTNRI 225
Query: 557 FGK 559
G+
Sbjct: 226 LGE 228
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 309 ANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPV 368
A Y +L +++AI+GRPNVGKS+L N ER +V ++ GTTRD I +
Sbjct: 196 AEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREY 255
Query: 369 TLLDTAGIRET---DDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSN 425
L+DTAG+R ++ VEK V ++ A+V+++ V A + + +D LL ++
Sbjct: 256 VLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNS 315
Query: 426 KKSTESSTPMILVINKID 443
+S +++ +NK D
Sbjct: 316 GRS------IVIAVNKWD 327
>TIGR_CMR|VC_0763 [details] [associations]
symbol:VC_0763 "GTP-binding protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 177 (67.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 67/243 (27%), Positives = 114/243 (46%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
+A+VGRPNVGKS+L N +++ A+V + G TRD + ++DT GI ++
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64
Query: 381 DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVIN 440
+ VE ++S A ADV++ V G T D + ++ +K P ILV+N
Sbjct: 65 EGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEK------PAILVVN 118
Query: 441 KIDC--APSASNEWNKVGNSFNDHVFTCAVT-GQGIQDLETAIMKIVGLHQIPAGGRRWA 497
K+D A +AS E+ ++G D ++ A G+G+ L ++ Q+ +
Sbjct: 119 KVDGIDADAASAEFWQLGM---DQMYQIAAAHGRGVGALIDRVLNPFA-EQMES------ 168
Query: 498 VNQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSN-I 556
Q Q E L ++ EEE ++ L+D + L I ++ + L+N I
Sbjct: 169 -EQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKR--LQDLPIKLAIIGRPNVGKSTLTNRI 225
Query: 557 FGK 559
G+
Sbjct: 226 LGE 228
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 309 ANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPV 368
A Y +L +++AI+GRPNVGKS+L N ER +V ++ GTTRD I +
Sbjct: 196 AEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREY 255
Query: 369 TLLDTAGIRET---DDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSN 425
L+DTAG+R ++ VEK V ++ A+V+++ V A + + +D LL ++
Sbjct: 256 VLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNS 315
Query: 426 KKSTESSTPMILVINKID 443
+S +++ +NK D
Sbjct: 316 GRS------IVIAVNKWD 327
>UNIPROTKB|Q2GKV6 [details] [associations]
symbol:der "GTPase Der" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 51/159 (32%), Positives = 84/159 (52%)
Query: 289 NLVM-DKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVT 347
NL M D A++ +E + E D+ + I+I+G+PNVGKS+ +N+ ER I +
Sbjct: 147 NLGMADLYEAIAPLIEQS-ERPKKDQ--DRPIAISIIGQPNVGKSTFVNSILGEERVITS 203
Query: 348 EIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDI---VEKIGVERSEAVALGADVIIMT 404
IAGTTRD I A + G+ + L DTAGIR+ + +EK+ V+ + + V+I+
Sbjct: 204 GIAGTTRDSISAEYSYKGITLLLTDTAGIRKRTKVTENMEKLSVQSAIHALSKSHVVILI 263
Query: 405 VSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKID 443
V G + +D + + + K ++L +NK D
Sbjct: 264 VDFTQGISQQDLSIASTAIKDGKG------IVLALNKAD 296
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 57/173 (32%), Positives = 85/173 (49%)
Query: 320 QIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRET 379
++AIVG PNVGKS+L N ++ + AIV++IA TRD EA V CG+ +DT G+ +
Sbjct: 3 KVAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLRFIAIDTGGVADG 62
Query: 380 DDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
+I + + A+ ADV++ + A T S L + S K T P+ILV
Sbjct: 63 GEIQSLVKTQVQLALE-NADVVLFVIDAQRA-TDSHSTSLGKWLS--KITNK--PIILVA 116
Query: 440 NKIDCAPSASNEWNKVGN--SFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIP 490
NK C + +N F V+ A G+ DL AI ++ + P
Sbjct: 117 NK--CESNKNNVHVDTMEYLGFLGPVYISAEHNLGMADLYEAIAPLIEQSERP 167
>TIGR_CMR|APH_0390 [details] [associations]
symbol:APH_0390 "putative GTP-binding protein EngA"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 51/159 (32%), Positives = 84/159 (52%)
Query: 289 NLVM-DKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVT 347
NL M D A++ +E + E D+ + I+I+G+PNVGKS+ +N+ ER I +
Sbjct: 147 NLGMADLYEAIAPLIEQS-ERPKKDQ--DRPIAISIIGQPNVGKSTFVNSILGEERVITS 203
Query: 348 EIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDI---VEKIGVERSEAVALGADVIIMT 404
IAGTTRD I A + G+ + L DTAGIR+ + +EK+ V+ + + V+I+
Sbjct: 204 GIAGTTRDSISAEYSYKGITLLLTDTAGIRKRTKVTENMEKLSVQSAIHALSKSHVVILI 263
Query: 405 VSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKID 443
V G + +D + + + K ++L +NK D
Sbjct: 264 VDFTQGISQQDLSIASTAIKDGKG------IVLALNKAD 296
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 57/173 (32%), Positives = 85/173 (49%)
Query: 320 QIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRET 379
++AIVG PNVGKS+L N ++ + AIV++IA TRD EA V CG+ +DT G+ +
Sbjct: 3 KVAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLRFIAIDTGGVADG 62
Query: 380 DDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
+I + + A+ ADV++ + A T S L + S K T P+ILV
Sbjct: 63 GEIQSLVKTQVQLALE-NADVVLFVIDAQRA-TDSHSTSLGKWLS--KITNK--PIILVA 116
Query: 440 NKIDCAPSASNEWNKVGN--SFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIP 490
NK C + +N F V+ A G+ DL AI ++ + P
Sbjct: 117 NK--CESNKNNVHVDTMEYLGFLGPVYISAEHNLGMADLYEAIAPLIEQSERP 167
>UNIPROTKB|Q5LR04 [details] [associations]
symbol:der "GTPase Der" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 172 (65.6 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 51/195 (26%), Positives = 93/195 (47%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
LQ+A+VGRPN GKS+L+N +R + AG TRD I + P+ + DTAG+R+
Sbjct: 203 LQVAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWNDTPMRIFDTAGMRK 262
Query: 379 TDDI---VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
+ +EK+ V A+V+++ + A + +D + + + ++ +
Sbjct: 263 KAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFEQQDLRIADLAEREGRA------V 316
Query: 436 ILVINKIDCAPSASNEWNKVGNSFN---------DHVFTCAVTGQGIQDLETAIMKI--V 484
++ +NK D + ++ ++ SF V A TG+G++ L AI++ V
Sbjct: 317 VIAVNKWDVEENKQDKLRELKESFERLLPQLRGAPLVTVSAKTGRGLERLHDAILRAHEV 376
Query: 485 GLHQIPAGG-RRWAV 498
+IP RW +
Sbjct: 377 WNRRIPTAALNRWLI 391
Score = 164 (62.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 50/166 (30%), Positives = 79/166 (47%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
L +AIVGRPNVGKS+L N A+V + G TRD+ E + + T++DTAG+
Sbjct: 3 LTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGLET 62
Query: 379 -TDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMIL 437
TDD ++ +E AD+ + + A G T D E+ I + S +IL
Sbjct: 63 ATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPND-EIFADILRRR-----SAHVIL 116
Query: 438 VINKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKI 483
NK + A + + G + + A G+G+ +L +M +
Sbjct: 117 AANKAEGAAADAGVIEAYGLGLGEPIRLSAEHGEGLNELYAVLMPL 162
Score = 38 (18.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 495 RWAVNQRQCEQLMRTKEALVRL 516
+W V + + ++L KE+ RL
Sbjct: 322 KWDVEENKQDKLRELKESFERL 343
>TIGR_CMR|SPO_2328 [details] [associations]
symbol:SPO_2328 "GTP-binding protein EngA" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 172 (65.6 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 51/195 (26%), Positives = 93/195 (47%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
LQ+A+VGRPN GKS+L+N +R + AG TRD I + P+ + DTAG+R+
Sbjct: 203 LQVAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWNDTPMRIFDTAGMRK 262
Query: 379 TDDI---VEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
+ +EK+ V A+V+++ + A + +D + + + ++ +
Sbjct: 263 KAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFEQQDLRIADLAEREGRA------V 316
Query: 436 ILVINKIDCAPSASNEWNKVGNSFN---------DHVFTCAVTGQGIQDLETAIMKI--V 484
++ +NK D + ++ ++ SF V A TG+G++ L AI++ V
Sbjct: 317 VIAVNKWDVEENKQDKLRELKESFERLLPQLRGAPLVTVSAKTGRGLERLHDAILRAHEV 376
Query: 485 GLHQIPAGG-RRWAV 498
+IP RW +
Sbjct: 377 WNRRIPTAALNRWLI 391
Score = 164 (62.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 50/166 (30%), Positives = 79/166 (47%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
L +AIVGRPNVGKS+L N A+V + G TRD+ E + + T++DTAG+
Sbjct: 3 LTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGLET 62
Query: 379 -TDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMIL 437
TDD ++ +E AD+ + + A G T D E+ I + S +IL
Sbjct: 63 ATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPND-EIFADILRRR-----SAHVIL 116
Query: 438 VINKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKI 483
NK + A + + G + + A G+G+ +L +M +
Sbjct: 117 AANKAEGAAADAGVIEAYGLGLGEPIRLSAEHGEGLNELYAVLMPL 162
Score = 38 (18.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 495 RWAVNQRQCEQLMRTKEALVRL 516
+W V + + ++L KE+ RL
Sbjct: 322 KWDVEENKQDKLRELKESFERL 343
>UNIPROTKB|P64057 [details] [associations]
symbol:der "GTPase Der" species:1773 "Mycobacterium
tuberculosis" [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0042254 EMBL:BX842577 GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:H70504 RefSeq:NP_216229.1 RefSeq:NP_336210.1
RefSeq:YP_006515108.1 ProteinModelPortal:P64057 SMR:P64057
PRIDE:P64057 EnsemblBacteria:EBMYCT00000000320
EnsemblBacteria:EBMYCT00000071863 GeneID:13316498 GeneID:885086
GeneID:923951 KEGG:mtc:MT1753 KEGG:mtu:Rv1713 KEGG:mtv:RVBD_1713
PATRIC:18125608 TubercuList:Rv1713 OMA:NCFLVIN ProtClustDB:PRK03003
Uniprot:P64057
Length = 463
Score = 164 (62.8 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 57/191 (29%), Positives = 89/191 (46%)
Query: 313 KLLQSGLQ--IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTL 370
++ +SG +A+VGRPNVGKS+L+N A+V +I G TRD + G +
Sbjct: 19 EIAESGAAPVVAVVGRPNVGKSTLVNRILGRREAVVQDIPGVTRDRVCYDALWTGRRFVV 78
Query: 371 LDTAGIRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTE 430
DT G ++++ E++ AD +I+ V A G T+ D E RI
Sbjct: 79 QDTGGWEPNAKGLQRLVAEQASVAMRTADAVILVVDAGVGATAAD-EAAARIL-----LR 132
Query: 431 SSTPMILVINKIDCAPSASNE---WNKVGNSFNDHVFTCAVTGQGIQDLETAIMKI---V 484
S P+ L NK+D S+ W+ +G H + A+ G+G+ DL ++ V
Sbjct: 133 SGKPVFLAANKVDSEKGESDAAALWS-LGLG-EPHAIS-AMHGRGVADLLDGVLAALPEV 189
Query: 485 GLHQIPAGGRR 495
G +GG R
Sbjct: 190 GESASASGGPR 200
Score = 156 (60.0 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 42/129 (32%), Positives = 71/129 (55%)
Query: 320 QIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRET 379
++A+VG+PNVGKSSLLN + +R++V E AGTT D +++ + + G +DTAG+R
Sbjct: 201 RVALVGKPNVGKSSLLNKLAGDQRSVVHEAAGTTVDPVDSLIELGGDVWRFVDTAGLRRK 260
Query: 380 DDIVEKIGVE-----RSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTP 434
+ + G E R+ A A+V I+ + A T +D +++ + E+
Sbjct: 261 --VGQASGHEFYASVRTHAAIDSAEVAIVLIDASQPLTEQDLRVISMV------IEAGRA 312
Query: 435 MILVINKID 443
++L NK D
Sbjct: 313 LVLAYNKWD 321
>UNIPROTKB|Q2GGW4 [details] [associations]
symbol:engA "GTPase Der" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 163 (62.4 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 43/129 (33%), Positives = 68/129 (52%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
++++IVGRPN GKS+ +N R IV+ GTTRD I+ T G TL+DTAG+R+
Sbjct: 174 IKLSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTYRGQKFTLIDTAGMRK 233
Query: 379 TDDIVEKI---GVERSEAVALGADVIIMTVSAVDGWTSEDSELLN-RIQSNKKSTESSTP 434
+ E I V ++ +D++I+ + +V G +D + IQ K
Sbjct: 234 KAKVTESIEVTSVHKTIESINRSDIVILMIDSVYGIEQQDLSIAELAIQKGKA------- 286
Query: 435 MILVINKID 443
+I+ +NK D
Sbjct: 287 IIIALNKWD 295
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 46/167 (27%), Positives = 80/167 (47%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
L+IAIVG PNVGKS++ N + + AIV+ I TRD E +CG+ ++DT G+
Sbjct: 2 LKIAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDN 61
Query: 379 TDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILV 438
T + + +++ + +D+I V A ++ E ++ K P+IL+
Sbjct: 62 TIKLSSLV-LDQVKLSIEESDIIFFVVDARIEHDDKNIEFAKYLRKKVKK-----PIILI 115
Query: 439 INKIDCAPSASNEWNKVGN-SFNDHVFTCAVTGQGIQDLETAIMKIV 484
NK + + + +G F V+ A G+ DL A++ +
Sbjct: 116 ANKCE-SQKRCYSIDYLGYFDFIGPVYISAEHNLGLVDLYEALLPFI 161
>TIGR_CMR|ECH_0504 [details] [associations]
symbol:ECH_0504 "GTP-binding protein EngA" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 163 (62.4 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 43/129 (33%), Positives = 68/129 (52%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
++++IVGRPN GKS+ +N R IV+ GTTRD I+ T G TL+DTAG+R+
Sbjct: 174 IKLSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTYRGQKFTLIDTAGMRK 233
Query: 379 TDDIVEKI---GVERSEAVALGADVIIMTVSAVDGWTSEDSELLN-RIQSNKKSTESSTP 434
+ E I V ++ +D++I+ + +V G +D + IQ K
Sbjct: 234 KAKVTESIEVTSVHKTIESINRSDIVILMIDSVYGIEQQDLSIAELAIQKGKA------- 286
Query: 435 MILVINKID 443
+I+ +NK D
Sbjct: 287 IIIALNKWD 295
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 46/167 (27%), Positives = 80/167 (47%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
L+IAIVG PNVGKS++ N + + AIV+ I TRD E +CG+ ++DT G+
Sbjct: 2 LKIAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDN 61
Query: 379 TDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILV 438
T + + +++ + +D+I V A ++ E ++ K P+IL+
Sbjct: 62 TIKLSSLV-LDQVKLSIEESDIIFFVVDARIEHDDKNIEFAKYLRKKVKK-----PIILI 115
Query: 439 INKIDCAPSASNEWNKVGN-SFNDHVFTCAVTGQGIQDLETAIMKIV 484
NK + + + +G F V+ A G+ DL A++ +
Sbjct: 116 ANKCE-SQKRCYSIDYLGYFDFIGPVYISAEHNLGLVDLYEALLPFI 161
>TIGR_CMR|BA_4524 [details] [associations]
symbol:BA_4524 "GTP-binding protein Era" species:198094
"Bacillus anthracis str. Ames" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20
InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814 HOGENOM:HOG000245596
KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
RefSeq:NP_846747.1 RefSeq:YP_021170.1 RefSeq:YP_030447.1
ProteinModelPortal:Q81LT7 DNASU:1088253
EnsemblBacteria:EBBACT00000009432 EnsemblBacteria:EBBACT00000018443
EnsemblBacteria:EBBACT00000022023 GeneID:1088253 GeneID:2819016
GeneID:2848213 KEGG:ban:BA_4524 KEGG:bar:GBAA_4524 KEGG:bat:BAS4199
BioCyc:BANT260799:GJAJ-4255-MONOMER
BioCyc:BANT261594:GJ7F-4400-MONOMER Uniprot:Q81LT7
Length = 301
Score = 159 (61.0 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 40/128 (31%), Positives = 71/128 (55%)
Query: 316 QSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAG 375
+SG ++I+GRPNVGKS+ LN + AI+++ TTR+ I+ T V +DT G
Sbjct: 7 KSGF-VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPG 65
Query: 376 IRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
I + + V+ ++ D+++ V+AV+G+ + ++ +++ K+ P+
Sbjct: 66 IHKPKHKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ------PV 119
Query: 436 ILVINKID 443
LVINKID
Sbjct: 120 FLVINKID 127
>TAIR|locus:2154915 [details] [associations]
symbol:AT5G66470 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0003723
Gene3D:3.30.300.20 InterPro:IPR015946 HSSP:Q9X1F8 eggNOG:COG1159
HOGENOM:HOG000245596 KO:K03595 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
EMBL:AY065195 EMBL:AY093245 IPI:IPI00521579 RefSeq:NP_201448.2
UniGene:At.28631 ProteinModelPortal:Q8VZ74 SMR:Q8VZ74 IntAct:Q8VZ74
STRING:Q8VZ74 PaxDb:Q8VZ74 PRIDE:Q8VZ74 EnsemblPlants:AT5G66470.1
GeneID:836779 KEGG:ath:AT5G66470 TAIR:At5g66470 InParanoid:Q8VZ74
PhylomeDB:Q8VZ74 ProtClustDB:CLSN2690267 ArrayExpress:Q8VZ74
Genevestigator:Q8VZ74 Uniprot:Q8VZ74
Length = 427
Score = 162 (62.1 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 65/220 (29%), Positives = 107/220 (48%)
Query: 272 EIEARLDFDDEMPPLNLNLVMDKIHAMSQD--VENALETANYDKLLQSGLQIAIVGRPNV 329
E + +D DE L+L++ D+ A+ D +E T N +SG +A+VG PNV
Sbjct: 84 EEQVEIDIVDEASLLSLSMKPDRNMALLDDYEMEELGHTPNTHH--RSGY-VAVVGMPNV 140
Query: 330 GKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVP---VTLLDTAGIRETD-DIVEK 385
GKS+L N + +IVT+ TTR I + +C P + L DT G+ E ++
Sbjct: 141 GKSTLSNQMIGQKISIVTDKPQTTRHRI---LGICSSPEYQMILYDTPGVIEKKMHRLDT 197
Query: 386 IGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCA 445
+ ++ A+ AD +++ V A T+ + E+L + E PM+LV+NK D
Sbjct: 198 MMMKNVRDAAINADCVVILVDACKTPTNIE-EVL---KEGLGDLEKKPPMLLVMNKKDLI 253
Query: 446 -PS--ASN-EWNKVGNSFNDHVFTCAVTGQGIQDLETAIM 481
P A EW + ++ + A G GI+D++ I+
Sbjct: 254 KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGIEDVKEWIL 293
>UNIPROTKB|Q8EH80 [details] [associations]
symbol:era "GTPase Era" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946
HSSP:Q9X1F8 SUPFAM:SSF54814 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 OMA:KVAKDWQ HOGENOM:HOG000245597
RefSeq:NP_716969.1 ProteinModelPortal:Q8EH80 GeneID:1169170
KEGG:son:SO_1349 PATRIC:23522352 Uniprot:Q8EH80
Length = 339
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/155 (32%), Positives = 84/155 (54%)
Query: 292 MDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAG 351
+D++ A A + +YD + G+ +AI+GRPNVGKS+LLN + +I ++
Sbjct: 21 LDELLARMNAASAAAPSVHYD-VTYCGM-VAIIGRPNVGKSTLLNRLLGQKISITSKKPQ 78
Query: 352 TTRDVIEASVTVCGVPVTLLDTAGIR-ETDDIVEKIGVERSEAVALGADVIIMTVSAVDG 410
TTR I T + +DT G+ E + ++ + R+ A +L ADV M + VDG
Sbjct: 79 TTRHRIMGIHTDGPRQIVFIDTPGLHIEEQRAINRL-MNRAAASSL-ADVS-MVIFVVDG 135
Query: 411 --WTSEDSELLNRIQSNKKSTESSTPMILVINKID 443
WT++D +L++++ + E T +L INK+D
Sbjct: 136 MTWTADDEMVLSKLR--RGGEERKT--VLAINKVD 166
>TIGR_CMR|SO_1349 [details] [associations]
symbol:SO_1349 "GTP-binding protein Era" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814
KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_716969.1 ProteinModelPortal:Q8EH80
GeneID:1169170 KEGG:son:SO_1349 PATRIC:23522352 Uniprot:Q8EH80
Length = 339
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/155 (32%), Positives = 84/155 (54%)
Query: 292 MDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAG 351
+D++ A A + +YD + G+ +AI+GRPNVGKS+LLN + +I ++
Sbjct: 21 LDELLARMNAASAAAPSVHYD-VTYCGM-VAIIGRPNVGKSTLLNRLLGQKISITSKKPQ 78
Query: 352 TTRDVIEASVTVCGVPVTLLDTAGIR-ETDDIVEKIGVERSEAVALGADVIIMTVSAVDG 410
TTR I T + +DT G+ E + ++ + R+ A +L ADV M + VDG
Sbjct: 79 TTRHRIMGIHTDGPRQIVFIDTPGLHIEEQRAINRL-MNRAAASSL-ADVS-MVIFVVDG 135
Query: 411 --WTSEDSELLNRIQSNKKSTESSTPMILVINKID 443
WT++D +L++++ + E T +L INK+D
Sbjct: 136 MTWTADDEMVLSKLR--RGGEERKT--VLAINKVD 166
>UNIPROTKB|Q8EAH6 [details] [associations]
symbol:hydF "Fe hydrogenase maturation GTPase HydF"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE014299 GenomeReviews:AE014299_GR HSSP:P25522
HOGENOM:HOG000287473 OMA:ILPQVQT InterPro:IPR023873
TIGRFAMs:TIGR03918 RefSeq:NP_719457.1 ProteinModelPortal:Q8EAH6
DNASU:1171565 GeneID:1171565 KEGG:son:SO_3926 PATRIC:23527532
ProtClustDB:CLSK2756122 Uniprot:Q8EAH6
Length = 394
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGV-PVTLLDTAGIRET 379
IA+VGR N GKSSLLN + + +IV++I GTT D + + + + PVT DTAGI +
Sbjct: 5 IALVGRRNSGKSSLLNMLAGQQISIVSDIKGTTTDAVAKAYELQPLGPVTFYDTAGI-DD 63
Query: 380 DDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
+ + + V + V +D+ ++ V G D L++ I+ + P+++V
Sbjct: 64 EGTLGAMRVSATRRVLFRSDMALLVVDE-QGLCPSDMALIDEIR------QLQMPILMVF 116
Query: 440 NKID-CAPSASN 450
NK D C P A +
Sbjct: 117 NKADICTPKAED 128
>TIGR_CMR|SO_3926 [details] [associations]
symbol:SO_3926 "GTP-binding protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014299 GenomeReviews:AE014299_GR
HSSP:P25522 HOGENOM:HOG000287473 OMA:ILPQVQT InterPro:IPR023873
TIGRFAMs:TIGR03918 RefSeq:NP_719457.1 ProteinModelPortal:Q8EAH6
DNASU:1171565 GeneID:1171565 KEGG:son:SO_3926 PATRIC:23527532
ProtClustDB:CLSK2756122 Uniprot:Q8EAH6
Length = 394
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGV-PVTLLDTAGIRET 379
IA+VGR N GKSSLLN + + +IV++I GTT D + + + + PVT DTAGI +
Sbjct: 5 IALVGRRNSGKSSLLNMLAGQQISIVSDIKGTTTDAVAKAYELQPLGPVTFYDTAGI-DD 63
Query: 380 DDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
+ + + V + V +D+ ++ V G D L++ I+ + P+++V
Sbjct: 64 EGTLGAMRVSATRRVLFRSDMALLVVDE-QGLCPSDMALIDEIR------QLQMPILMVF 116
Query: 440 NKID-CAPSASN 450
NK D C P A +
Sbjct: 117 NKADICTPKAED 128
>TIGR_CMR|CHY_0430 [details] [associations]
symbol:CHY_0430 "GTP-binding protein Era" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
OMA:ITREQLF SUPFAM:SSF54814 eggNOG:COG1159 HOGENOM:HOG000245596
KO:K03595 TIGRFAMs:TIGR00436 RefSeq:YP_359291.1
ProteinModelPortal:Q3AEZ3 STRING:Q3AEZ3 GeneID:3728261
KEGG:chy:CHY_0430 PATRIC:21274021
BioCyc:CHYD246194:GJCN-431-MONOMER Uniprot:Q3AEZ3
Length = 298
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 59/221 (26%), Positives = 109/221 (49%)
Query: 316 QSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAG 375
+SG ++IVGRPNVGKS+LLN ++ AI+++ TTR+ I A +T + +DT G
Sbjct: 4 KSGF-VSIVGRPNVGKSTLLNQVVGTKIAIMSDKPQTTRNKIRAVLTSEKGQIIFIDTPG 62
Query: 376 IRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
+++ + + + ++++ DV++ V A +++ LL K E TP+
Sbjct: 63 VQKPRNKLGEFMLKQALTSLDEVDVLLYVVEANSPIGPQENYLL------KTLAEVKTPI 116
Query: 436 ILVINKIDCAP--SASNEWNKVGNSFN--DHVFTCAVTGQGIQDLETAIMKIV--GLHQI 489
ILV+NKID A ++ + + A+ G G+ +L I +++ G
Sbjct: 117 ILVVNKIDVVKMIEAQTLARQIESRLKVAKTYYISALNGTGVSELVEGIFELLPEGPPYY 176
Query: 490 PAGG-----RRWAVNQRQCEQLMR-TKEALVRLKSSIEEEL 524
P G R+ + + EQ++ T+E + + + EE+
Sbjct: 177 PEGQVTDYPERFIIAEYIREQILHLTREEIPHSVAVVVEEI 217
>UNIPROTKB|P37214 [details] [associations]
symbol:era "GTPase Era" species:210007 "Streptococcus
mutans UA159" [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0019003 "GDP
binding" evidence=IDA] HAMAP:MF_00367 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0042254 GO:GO:0019843 GO:GO:0019003
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ EMBL:L03428 EMBL:AE014133 RefSeq:NP_721952.1
ProteinModelPortal:P37214 EnsemblBacteria:EBSTRT00000013881
GeneID:1028847 GenomeReviews:AE014133_GR KEGG:smu:SMU_1617
PATRIC:19665223 SABIO-RK:P37214 Uniprot:P37214
Length = 299
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 43/128 (33%), Positives = 68/128 (53%)
Query: 316 QSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAG 375
+SG +AI+GRPNVGKS+ LN + AI+++ A TTR+ I T + +DT G
Sbjct: 4 KSGF-VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPG 62
Query: 376 IRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
I + + VE + + D ++ V A + D+ ++ R+++ K P+
Sbjct: 63 IHKPKTALGDFMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERLKAAK------VPV 116
Query: 436 ILVINKID 443
ILVINKID
Sbjct: 117 ILVINKID 124
>UNIPROTKB|P06616 [details] [associations]
symbol:era "GTP-binding protein" species:83333 "Escherichia
coli K-12" [GO:0005829 "cytosol" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IDA] [GO:0070181 "SSU rRNA binding"
evidence=IDA] [GO:0043024 "ribosomal small subunit binding"
evidence=IDA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA;IDA]
[GO:0005525 "GTP binding" evidence=IEA;IDA] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0006468 EMBL:D64044
EMBL:U36841 GO:GO:0042274 GO:GO:0070181 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ EMBL:M14658 EMBL:X02673 PIR:S44713 RefSeq:NP_417061.1
RefSeq:YP_490794.1 PDB:1EGA PDB:3IEU PDBsum:1EGA PDBsum:3IEU
ProteinModelPortal:P06616 SMR:P06616 DIP:DIP-9521N IntAct:P06616
MINT:MINT-1248282 PhosSite:P010424 PRIDE:P06616
EnsemblBacteria:EBESCT00000004013 EnsemblBacteria:EBESCT00000004014
EnsemblBacteria:EBESCT00000015240 GeneID:12934226 GeneID:947036
KEGG:ecj:Y75_p2519 KEGG:eco:b2566 PATRIC:32120531 EchoBASE:EB0266
EcoGene:EG10270 HOGENOM:HOG000245597 BioCyc:EcoCyc:EG10270-MONOMER
BioCyc:ECOL316407:JW2550-MONOMER EvolutionaryTrace:P06616
Genevestigator:P06616 Uniprot:P06616
Length = 301
Score = 151 (58.2 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIR-ET 379
IAIVGRPNVGKS+LLN + +I + A TTR I T +DT G+ E
Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 70
Query: 380 DDIVEKIGVERSEAVALGADVIIMTVSAVDG--WTSEDSELLNRIQSNKKSTESSTPMIL 437
+ ++ + ++ + ++G DV ++ + V+G WT +D +LN+++ K P+IL
Sbjct: 71 KRAINRL-MNKAASSSIG-DVELV-IFVVEGTRWTPDDEMVLNKLREGK------APVIL 121
Query: 438 VINKIDCAPSASN-----EWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIV--GLHQIP 490
+NK+D ++ ++ +F D V A TG + + + K + H P
Sbjct: 122 AVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHFP 181
Query: 491 AG-----GRRWAVNQRQCEQLMRTKEALVRLKSSIEEE 523
+R+ ++ E+LMR A + ++E E
Sbjct: 182 EDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIE 219
>TIGR_CMR|CBU_1502 [details] [associations]
symbol:CBU_1502 "GTP-binding protein Era" species:227377
"Coxiella burnetii RSA 493" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0016049 "cell growth" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0019843 Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 eggNOG:COG1159
HOGENOM:HOG000245596 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 EMBL:L27436 PIR:S60768 RefSeq:NP_820485.1
ProteinModelPortal:P51836 SMR:P51836 GeneID:1209412
KEGG:cbu:CBU_1502 PATRIC:17931769 OMA:KVAKDWQ
BioCyc:CBUR227377:GJ7S-1487-MONOMER Uniprot:P51836
Length = 295
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/211 (27%), Positives = 100/211 (47%)
Query: 322 AIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE-TD 380
AI+GRPNVGKS+LLN + + +I + TTR I T + V +DT G+ T+
Sbjct: 10 AIIGRPNVGKSTLLNQLLEQKISITSRKPQTTRYQILGVKTFKDIQVIYVDTPGLHAGTE 69
Query: 381 DIVEKIGVERSEAVAL-GADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
+ + + R+ AL D I+ + W S+D+ +L+ ++ E TP+ LVI
Sbjct: 70 RTINRY-MNRTARGALRDVDAIVFVIEP--HWESQDAWVLDNLK------EIETPVFLVI 120
Query: 440 NKIDCAPSASNEW---NKVGNSFNDHVFT--CAVTGQGIQDLETAIMKIVGLHQIPAGGR 494
NK+D + + KV + + T A TG + LE A+ ++ + + P
Sbjct: 121 NKVDKIKNRAELLPLIEKVSSLYAFQKITPLSAKTGDQVGTLEQAVHQL--MPESPFYFP 178
Query: 495 RWAVNQRQCEQLMRTKEALVRLKSSIEEELP 525
V R +Q M ++ +L + +E+P
Sbjct: 179 PEQVTDRS-DQFMASEIIREKLMRLLGQEIP 208
>UNIPROTKB|Q74AX3 [details] [associations]
symbol:era "GTPase Era" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR003593 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_953275.1 ProteinModelPortal:Q74AX3
GeneID:2687595 KEGG:gsu:GSU2226 PATRIC:22027307
BioCyc:GSUL243231:GH27-2182-MONOMER Uniprot:Q74AX3
Length = 299
Score = 144 (55.7 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 39/128 (30%), Positives = 66/128 (51%)
Query: 316 QSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAG 375
+SG ++I+GRPNVGKS+LLN + I ++ TTR+ I+ + G + +DT G
Sbjct: 8 RSGF-VSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPG 66
Query: 376 IRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
I + K VE + + D++++ V A ++ E+ + S + P+
Sbjct: 67 IHHARSRLNKFMVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPS------VNVPV 120
Query: 436 ILVINKID 443
LV+NKID
Sbjct: 121 FLVVNKID 128
>TIGR_CMR|GSU_2226 [details] [associations]
symbol:GSU_2226 "GTP-binding protein Era" species:243231
"Geobacter sulfurreducens PCA" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR003593 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_953275.1 ProteinModelPortal:Q74AX3
GeneID:2687595 KEGG:gsu:GSU2226 PATRIC:22027307
BioCyc:GSUL243231:GH27-2182-MONOMER Uniprot:Q74AX3
Length = 299
Score = 144 (55.7 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 39/128 (30%), Positives = 66/128 (51%)
Query: 316 QSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAG 375
+SG ++I+GRPNVGKS+LLN + I ++ TTR+ I+ + G + +DT G
Sbjct: 8 RSGF-VSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPG 66
Query: 376 IRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
I + K VE + + D++++ V A ++ E+ + S + P+
Sbjct: 67 IHHARSRLNKFMVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPS------VNVPV 120
Query: 436 ILVINKID 443
LV+NKID
Sbjct: 121 FLVVNKID 128
>GENEDB_PFALCIPARUM|PFL0835w [details] [associations]
symbol:PFL0835w "GTP-binding protein, putative"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 151 (58.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 51/174 (29%), Positives = 84/174 (48%)
Query: 316 QSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVP--VTLLDT 373
Q+ + I+ +G+PN GKSS+LN R IV+ +AGTT D I+ V + L+DT
Sbjct: 570 QNTINISFIGKPNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRIYRLIDT 629
Query: 374 AGIRETDDIV--------EKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRI-QS 424
AGI++ V E + R+E +DV I+ + + +G +++D + +I Q
Sbjct: 630 AGIQKRKKNVPFNNKTKYEYLLYNRTEKAIKRSDVCILVIDSFNGISTQDINIARKIVQE 689
Query: 425 NKKSTESSTPMILVINKIDCAPSASNE-WNKVGN-SFNDHVFTCAVTGQGIQDL 476
NK L+ NK D N N + F++ +F A T Q + ++
Sbjct: 690 NKSCIICCNKWDLIYNKNDIFNDTKNYVLNLLKPIDFSNIIFISAKTSQRLLNI 743
>UNIPROTKB|Q8I5N5 [details] [associations]
symbol:PFL0835w "GTP binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 151 (58.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 51/174 (29%), Positives = 84/174 (48%)
Query: 316 QSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVP--VTLLDT 373
Q+ + I+ +G+PN GKSS+LN R IV+ +AGTT D I+ V + L+DT
Sbjct: 570 QNTINISFIGKPNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRIYRLIDT 629
Query: 374 AGIRETDDIV--------EKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRI-QS 424
AGI++ V E + R+E +DV I+ + + +G +++D + +I Q
Sbjct: 630 AGIQKRKKNVPFNNKTKYEYLLYNRTEKAIKRSDVCILVIDSFNGISTQDINIARKIVQE 689
Query: 425 NKKSTESSTPMILVINKIDCAPSASNE-WNKVGN-SFNDHVFTCAVTGQGIQDL 476
NK L+ NK D N N + F++ +F A T Q + ++
Sbjct: 690 NKSCIICCNKWDLIYNKNDIFNDTKNYVLNLLKPIDFSNIIFISAKTSQRLLNI 743
>UNIPROTKB|Q3ABV4 [details] [associations]
symbol:CHY_1548 "GTP-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG1160
RefSeq:YP_360380.1 ProteinModelPortal:Q3ABV4 STRING:Q3ABV4
GeneID:3727802 KEGG:chy:CHY_1548 PATRIC:21276225
HOGENOM:HOG000287473 OMA:ILPQVQT
BioCyc:CHYD246194:GJCN-1547-MONOMER InterPro:IPR023873
TIGRFAMs:TIGR03918 Uniprot:Q3ABV4
Length = 397
Score = 144 (55.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 53/181 (29%), Positives = 83/181 (45%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGV-PVTLLDTAGIRET 379
I I GR N GKS+LLN ERAI + I GTT D + + PV +DT G+ +T
Sbjct: 12 IGIFGRCNAGKSTLLNNIIGEERAITSSIPGTTTDPNRRAFELLPYGPVEFIDTPGLDDT 71
Query: 380 DDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
++ +I ++ V V+I+ + G+ ED EL I+ N +++ +I +I
Sbjct: 72 S-VLGEIRKAKTREVLATCSVVILVGNT--GFKPEDWEL-QFIEEN----QTTKKIIGII 123
Query: 440 NKIDCAPSASNEWNKVGNSFNDH--VFTC------AVTGQGIQDLETAIMKIVGLHQIPA 491
N ++ W K FN + C AV +Q+L+ + K V +P
Sbjct: 124 NMVESKTENLEAWKKFFEKFNIPYLLHDCKNGASSAVRNFLVQNLQEKVQKTVVADLVPK 183
Query: 492 G 492
G
Sbjct: 184 G 184
>TIGR_CMR|CHY_1548 [details] [associations]
symbol:CHY_1548 "GTP-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG1160 RefSeq:YP_360380.1
ProteinModelPortal:Q3ABV4 STRING:Q3ABV4 GeneID:3727802
KEGG:chy:CHY_1548 PATRIC:21276225 HOGENOM:HOG000287473 OMA:ILPQVQT
BioCyc:CHYD246194:GJCN-1547-MONOMER InterPro:IPR023873
TIGRFAMs:TIGR03918 Uniprot:Q3ABV4
Length = 397
Score = 144 (55.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 53/181 (29%), Positives = 83/181 (45%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGV-PVTLLDTAGIRET 379
I I GR N GKS+LLN ERAI + I GTT D + + PV +DT G+ +T
Sbjct: 12 IGIFGRCNAGKSTLLNNIIGEERAITSSIPGTTTDPNRRAFELLPYGPVEFIDTPGLDDT 71
Query: 380 DDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVI 439
++ +I ++ V V+I+ + G+ ED EL I+ N +++ +I +I
Sbjct: 72 S-VLGEIRKAKTREVLATCSVVILVGNT--GFKPEDWEL-QFIEEN----QTTKKIIGII 123
Query: 440 NKIDCAPSASNEWNKVGNSFNDH--VFTC------AVTGQGIQDLETAIMKIVGLHQIPA 491
N ++ W K FN + C AV +Q+L+ + K V +P
Sbjct: 124 NMVESKTENLEAWKKFFEKFNIPYLLHDCKNGASSAVRNFLVQNLQEKVQKTVVADLVPK 183
Query: 492 G 492
G
Sbjct: 184 G 184
>TIGR_CMR|NSE_0959 [details] [associations]
symbol:NSE_0959 "GTP-binding protein Era" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 GO:GO:0003924
GO:GO:0006184 EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0042274
GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ HOGENOM:HOG000245597 RefSeq:YP_506823.1
ProteinModelPortal:Q2GCH3 STRING:Q2GCH3 GeneID:3931774
KEGG:nse:NSE_0959 PATRIC:22681891
BioCyc:NSEN222891:GHFU-961-MONOMER Uniprot:Q2GCH3
Length = 308
Score = 141 (54.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 57/230 (24%), Positives = 100/230 (43%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
++++G NVGKS+LLNA S+ + VT TTR I T V + +DT GI
Sbjct: 25 VSLIGNSNVGKSTLLNALIGSKISAVTHKVQTTRTRIRGIYTKDDVQLVFVDTPGIFIPR 84
Query: 381 DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVIN 440
+E++ V+ + G D+ + + ++L + +N K ++LVIN
Sbjct: 85 CQLERVIVKNAWRAFAGTDIFCFIIDPRRPISDSTKDILRK--ANGK-------LVLVIN 135
Query: 441 KIDCA--P---SASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIV--GLHQIPAGG 493
KID P + E N +G+ F A+ G G+ DL ++K G
Sbjct: 136 KIDLVEKPRLLEVAQELNSLGH-FEKTFMISALKGNGVADLMNYLLKSAQPGPWYFDKED 194
Query: 494 RRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQI 543
+++R K +RL + L ++ I++ D ++ + Q+
Sbjct: 195 ETDMPLGFNLSEILREK-LFIRLHQELPYSLTVETENIEILDRSVKIRQV 243
>TIGR_CMR|ECH_0476 [details] [associations]
symbol:ECH_0476 "GTP-binding protein Era" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 OMA:ITREQLF SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
HOGENOM:HOG000245597 RefSeq:YP_507292.1 ProteinModelPortal:Q2GGZ1
STRING:Q2GGZ1 GeneID:3928006 KEGG:ech:ECH_0476 PATRIC:20576424
BioCyc:ECHA205920:GJNR-478-MONOMER Uniprot:Q2GGZ1
Length = 296
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 322 AIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDD 381
AIVG N GKS+L+N + A VT TTR + A + V + +DT GI
Sbjct: 12 AIVGTTNAGKSTLINMLVGQKVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSPKT 71
Query: 382 IVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINK 441
+EK V+ + G + +I+ + + ++++RI+ +S+ ILV+NK
Sbjct: 72 KLEKFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKIISRIK------QSNINAILVVNK 125
Query: 442 IDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVG-LHQIPAGGRRWAVNQ 500
ID P++S + + + ++ H F+ T + D+ + ++V L +I G W +
Sbjct: 126 IDTVPTSSVD-KAIEHMYSLHSFSKTFTISALHDI--GLSRLVDYLCEISPNGP-WLYPE 181
Query: 501 RQCEQ--LMRTKEALVRLKS--SIEEELP 525
Q L + R K S+ ELP
Sbjct: 182 DQISDAPLKFFMAEITREKLFLSLHHELP 210
>TIGR_CMR|SPO_0691 [details] [associations]
symbol:SPO_0691 "GTP-binding protein Era" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0016049 "cell growth" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20
InterPro:IPR015946 OMA:ITREQLF SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 HOGENOM:HOG000245597
RefSeq:YP_165946.1 ProteinModelPortal:Q5LVK9 GeneID:3195765
KEGG:sil:SPO0691 PATRIC:23374651 Uniprot:Q5LVK9
Length = 301
Score = 135 (52.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
+A++G PN GKS+LLN ++ +IVT TTR I + +DT G+ +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRTRIRGVAMEGEAQIVFVDTPGLFQPR 67
Query: 381 DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVIN 440
+++ V + A AD++++ + A G T E + RI + L IN
Sbjct: 68 RRLDRAMVAAAWGGAADADIVVLMIEAHRGIT----EGVERILEGLAEIAKGRTVALAIN 123
Query: 441 KIDCAPSAS----NEWNKVGNSFNDHVFTCAVTGQGIQDL 476
KID P+ +E F A G G++DL
Sbjct: 124 KIDRVPAEKLLGLSEALNARFEFARTFMISAERGHGVEDL 163
>UNIPROTKB|O33230 [details] [associations]
symbol:hflX "GTPase HflX" species:1773 "Mycobacterium
tuberculosis" [GO:0005886 "plasma membrane" evidence=IDA]
HAMAP:MF_00900 InterPro:IPR006073 InterPro:IPR016496 Pfam:PF01926
PIRSF:PIRSF006809 PRINTS:PR00326 GO:GO:0005525 GO:GO:0005886
GO:GO:0005737 GenomeReviews:AL123456_GR EMBL:BX842580 GO:GO:0003924
GO:GO:0006184 HSSP:P44681 HOGENOM:HOG000260368 PANTHER:PTHR10229
TIGRFAMs:TIGR03156 KO:K03665 InterPro:IPR025121 Pfam:PF13167
OMA:ITEVEYR EMBL:AL123456 PIR:D70505 RefSeq:NP_217241.1
RefSeq:YP_006516169.1 ProteinModelPortal:O33230 SMR:O33230
PRIDE:O33230 EnsemblBacteria:EBMYCT00000002990 GeneID:13319452
GeneID:888241 KEGG:mtu:Rv2725c KEGG:mtv:RVBD_2725c PATRIC:18154645
TubercuList:Rv2725c ProtClustDB:CLSK872099 Uniprot:O33230
Length = 495
Score = 137 (53.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 50/168 (29%), Positives = 73/168 (43%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAG-IRET 379
IAIVG N GKSSLLNA + + + + T + G PV L DT G +R
Sbjct: 273 IAIVGYTNAGKSSLLNALTGAGVLVQDALFATLEPTTRRAEFGDGRPVVLTDTVGFVRHL 332
Query: 380 D-DIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM--I 436
+VE E V AD+++ V DG + + ++ S + P +
Sbjct: 333 PTQLVEAFRSTLEEVVH--ADLLVHVVDGSDGHPLAQIDAVRQVISEVIADHDGDPPPEL 390
Query: 437 LVINKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIV 484
LV+NK+D A K+ + VF A TG GI L + ++V
Sbjct: 391 LVVNKVDVASDLMLA--KLRHGLPGAVFVSARTGDGIDALRRRMAELV 436
>TIGR_CMR|CJE_0763 [details] [associations]
symbol:CJE_0763 "GTP-binding protein Era" species:195099
"Campylobacter jejuni RM1221" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 GO:GO:0042254
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814
eggNOG:COG1159 RefSeq:YP_178772.1 ProteinModelPortal:Q5HVB3
STRING:Q5HVB3 GeneID:3230715 KEGG:cjr:CJE0763 PATRIC:20043259
HOGENOM:HOG000245596 KO:K03595 OMA:ATRRKIN ProtClustDB:PRK00089
BioCyc:CJEJ195099:GJC0-779-MONOMER TIGRFAMs:TIGR00436
Uniprot:Q5HVB3
Length = 291
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/136 (29%), Positives = 72/136 (52%)
Query: 315 LQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTA 374
++SG ++I+GR N GKS+L+N+ + + A+V+ TR I+A V + +DT
Sbjct: 1 MKSGF-VSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKAIVMHEKNQIIFIDTP 59
Query: 375 GIRETDDIVEKIGVERSEAVALG-ADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESST 433
G+ E+ + ++ V+ S ++G DVI+ S D +++D E N S
Sbjct: 60 GLHESGATLNQLLVQ-SAIKSMGDCDVILFVASVFD--STKDYE-------NFLSLNPQV 109
Query: 434 PMILVINKIDCAPSAS 449
P I+ +NK+D +A+
Sbjct: 110 PHIIALNKVDLTDNAT 125
>TIGR_CMR|APH_0350 [details] [associations]
symbol:APH_0350 "GTP-binding protein Era" species:212042
"Anaplasma phagocytophilum HZ" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 GO:GO:0003924
GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0042274
GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946 OMA:ITREQLF
SUPFAM:SSF54814 eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 HOGENOM:HOG000245597 RefSeq:YP_504957.1
ProteinModelPortal:Q2GKZ4 STRING:Q2GKZ4 GeneID:3930686
KEGG:aph:APH_0350 PATRIC:20949290
BioCyc:APHA212042:GHPM-379-MONOMER Uniprot:Q2GKZ4
Length = 305
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 48/168 (28%), Positives = 82/168 (48%)
Query: 314 LLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDT 373
L++ L +A+VG N GKS+L+N + +IVT TTR + + + V + DT
Sbjct: 16 LMKCSL-VAVVGMTNAGKSTLINKLVGFKASIVTNKVHTTRVKMNSVLNEGNVQLVFTDT 74
Query: 374 AGIRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESST 433
GI +EK V+ + GAD++I+ + A +++ R+Q + ++
Sbjct: 75 PGIFSPKTKLEKFIVKNAWMSMKGADMVILVLDAKRRICVHVEKIIKRLQRDNVAS---- 130
Query: 434 PMILVINKIDCAPSAS----NEWNKVGNSFNDHVFTCA-VTGQGIQDL 476
I VINK+D E ++ + F D VFT + + G G++DL
Sbjct: 131 --IAVINKMDLLDEGELATFAERVQLLHKF-DRVFTVSSLYGTGVRDL 175
>UNIPROTKB|Q9KPB3 [details] [associations]
symbol:era "GTPase Era" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0042254
GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ PIR:A82073 RefSeq:NP_232089.1 ProteinModelPortal:Q9KPB3
SMR:Q9KPB3 DNASU:2613002 GeneID:2613002 KEGG:vch:VC2460
PATRIC:20083941 Uniprot:Q9KPB3
Length = 325
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 39/127 (30%), Positives = 65/127 (51%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
+AIVGRPNVGKS+LLN + +I + TTR I T +DT G+
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLH--- 90
Query: 381 DIVEKIGVER--SEAVALGADVIIMTVSAVDG--WTSEDSELLNRIQSNKKSTESSTPMI 436
I EK + R + A + + + + V+G WT++D + ++Q +++ P++
Sbjct: 91 -IEEKRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTKLQ------KANFPVV 143
Query: 437 LVINKID 443
L +NK+D
Sbjct: 144 LCVNKVD 150
>TIGR_CMR|VC_2460 [details] [associations]
symbol:VC_2460 "GTP-binding protein Era" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ PIR:A82073 RefSeq:NP_232089.1 ProteinModelPortal:Q9KPB3
SMR:Q9KPB3 DNASU:2613002 GeneID:2613002 KEGG:vch:VC2460
PATRIC:20083941 Uniprot:Q9KPB3
Length = 325
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 39/127 (30%), Positives = 65/127 (51%)
Query: 321 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETD 380
+AIVGRPNVGKS+LLN + +I + TTR I T +DT G+
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLH--- 90
Query: 381 DIVEKIGVER--SEAVALGADVIIMTVSAVDG--WTSEDSELLNRIQSNKKSTESSTPMI 436
I EK + R + A + + + + V+G WT++D + ++Q +++ P++
Sbjct: 91 -IEEKRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTKLQ------KANFPVV 143
Query: 437 LVINKID 443
L +NK+D
Sbjct: 144 LCVNKVD 150
>UNIPROTKB|Q5SM23 [details] [associations]
symbol:era "GTPase Era" species:300852 "Thermus
thermophilus HB8" [GO:0000028 "ribosomal small subunit assembly"
evidence=IDA] [GO:0043024 "ribosomal small subunit binding"
evidence=IDA] [GO:0070181 "SSU rRNA binding" evidence=IDA]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0000028 EMBL:AP008226 GenomeReviews:AP008226_GR GO:GO:0070181
GO:GO:0043024 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ HOGENOM:HOG000245597 RefSeq:YP_143386.1 PDB:1WF3
PDB:1X18 PDB:1X1L PDBsum:1WF3 PDBsum:1X18 PDBsum:1X1L
ProteinModelPortal:Q5SM23 SMR:Q5SM23 STRING:Q5SM23 GeneID:3167951
KEGG:ttj:TTHA0120 PATRIC:23955177 EvolutionaryTrace:Q5SM23
Uniprot:Q5SM23
Length = 301
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 44/130 (33%), Positives = 66/130 (50%)
Query: 317 SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGI 376
SG +AIVG+PNVGKS+LLN + A ++ TTR + +T + +DT G+
Sbjct: 7 SGF-VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGL 65
Query: 377 RETDDIV-EKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPM 435
+ D + E + E EA+A + ++ V T ED EL+ R K P+
Sbjct: 66 HKPMDALGEFMDQEVYEALA-DVNAVVWVVDLRHPPTPED-ELVARAL---KPLVGKVPI 120
Query: 436 ILVINKIDCA 445
+LV NK+D A
Sbjct: 121 LLVGNKLDAA 130
>DICTYBASE|DDB_G0288609 [details] [associations]
symbol:eral1 "GTP-binding protein era homolog"
species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 PRINTS:PR00326
dictyBase:DDB_G0288609 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 EMBL:AAFI02000118 RefSeq:XP_636640.1
ProteinModelPortal:Q54IP6 STRING:Q54IP6 EnsemblProtists:DDB0219361
GeneID:8626714 KEGG:ddi:DDB_G0288609 InParanoid:Q54IP6 OMA:DAVKRPT
Uniprot:Q54IP6
Length = 398
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 49/229 (21%), Positives = 105/229 (45%)
Query: 267 IELLTEIEARLDFDDEMPPLNLNLVMDKIHAMSQDV-ENA--LETANYDKLLQSGLQIAI 323
I +L E + ++ ++ P+ V+ + D+ E + LET +++ ++ L +AI
Sbjct: 62 INILEEQDKKIR-EERAQPIKRKRVVRSYNITPPDITEQSMQLETPIHNENAKT-LNVAI 119
Query: 324 VGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIV 383
+G PN GKS+L+N+ + V+ TTRD + + + DT GI + + +
Sbjct: 120 IGAPNAGKSTLVNSIVGEKICAVSPTEHTTRDAVLGIYSKDDTQILFHDTPGIIKNFNRM 179
Query: 384 EKIG--VERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINK 441
+ V + V AD++++ V A + +S+ ++ +++ + M K
Sbjct: 180 AHVREFVNLAWGVVKEADIVLLVVDATNNNSSDTEFIVGKLEEQMLNLIKRMRMEQTNAK 239
Query: 442 IDCAPSASNEWNKVGN-SFNDHVFTCAVTGQG-IQDLETAIMKIVGLHQ 488
+ A +++ E + N S ++ F V ++ ET + I L++
Sbjct: 240 ANAATASNEELGAIVNDSLDEKEFILVVNKVDLVKKKETLVQMISQLNE 288
>UNIPROTKB|P0A562 [details] [associations]
symbol:era "GTPase Era" species:1773 "Mycobacterium
tuberculosis" [GO:0005829 "cytosol" evidence=IDA] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_00367 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0042254 EMBL:BX842579 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 HOGENOM:HOG000245596 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 OMA:KVAKDWQ PIR:C70586 RefSeq:NP_336913.1
RefSeq:YP_006515798.1 RefSeq:YP_177873.1 ProteinModelPortal:P0A562
SMR:P0A562 EnsemblBacteria:EBMYCT00000003963
EnsemblBacteria:EBMYCT00000070369 GeneID:13319070 GeneID:886027
GeneID:925918 KEGG:mtc:MT2433 KEGG:mtu:Rv2364c KEGG:mtv:RVBD_2364c
PATRIC:18127100 TubercuList:Rv2364c Uniprot:P0A562
Length = 300
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 36/130 (27%), Positives = 64/130 (49%)
Query: 317 SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGI 376
SG + +VGRPN GKS+L NA ++ AI + TTR I V + L+DT G+
Sbjct: 6 SGF-VCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTPGL 64
Query: 377 RETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMI 436
++ K + DVI + + A + D ++ +++S + ++T ++
Sbjct: 65 HRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRS---TGPANTTLV 121
Query: 437 LVINKIDCAP 446
+++ KID P
Sbjct: 122 VIVTKIDKVP 131
>MGI|MGI:1889295 [details] [associations]
symbol:Eral1 "Era (G-protein)-like 1 (E. coli)"
species:10090 "Mus musculus" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0043024 "ribosomal small
subunit binding" evidence=ISO] InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 PRINTS:PR00326 PROSITE:PS50823 MGI:MGI:1889295
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743 GO:GO:0005759
GO:GO:0019843 GO:GO:0000028 GO:GO:0043024 Gene3D:3.30.300.20
InterPro:IPR015946 EMBL:AL669840 CTD:26284
GeneTree:ENSGT00390000013800 HOGENOM:HOG000245598 OMA:ITREQLF
SUPFAM:SSF54814 eggNOG:COG1159 HOVERGEN:HBG051495 OrthoDB:EOG44XJGX
EMBL:AB049389 EMBL:AK012155 EMBL:BC019728 EMBL:BC068271
IPI:IPI00469219 RefSeq:NP_071708.2 UniGene:Mm.21096
ProteinModelPortal:Q9CZU4 SMR:Q9CZU4 STRING:Q9CZU4
PhosphoSite:Q9CZU4 PRIDE:Q9CZU4 Ensembl:ENSMUST00000021183
GeneID:57837 KEGG:mmu:57837 UCSC:uc007kia.2 InParanoid:Q8VE60
NextBio:314014 Bgee:Q9CZU4 CleanEx:MM_ERAL1 Genevestigator:Q9CZU4
GermOnline:ENSMUSG00000020832 Uniprot:Q9CZU4
Length = 437
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 43/136 (31%), Positives = 65/136 (47%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGI-- 376
L++ ++G PN GKS+L N + V++ TTR +T V LLDT GI
Sbjct: 114 LRVVLLGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRCQALGVITEKETQVILLDTPGIIS 173
Query: 377 --RETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRI-QSNKKSTESST 433
++ +E+ +E AD++++ V D WT S L ++ Q K S
Sbjct: 174 PVKQKRHHLERSLLEDPWTSMESADLVVVLVDVSDKWTR--SRLNPQVLQCLTKF--SQV 229
Query: 434 PMILVINKIDCAPSAS 449
P ILV+NK+DC S
Sbjct: 230 PSILVLNKVDCLKQKS 245
>ZFIN|ZDB-GENE-060526-84 [details] [associations]
symbol:eral1 "Era G-protein-like 1 (E. coli)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=ISS] [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00449 PROSITE:PS50823 ZFIN:ZDB-GENE-060526-84
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0005743
GO:GO:0005759 GO:GO:0019843 GO:GO:0000028 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 CTD:26284
GeneTree:ENSGT00390000013800 HOGENOM:HOG000245598 SUPFAM:SSF54814
eggNOG:COG1159 HOVERGEN:HBG051495 OrthoDB:EOG44XJGX EMBL:BX548073
EMBL:BC163468 EMBL:BC163480 IPI:IPI00799669 RefSeq:NP_001122219.1
UniGene:Dr.155067 ProteinModelPortal:B0S6U7 STRING:B0S6U7
Ensembl:ENSDART00000083778 GeneID:569087 KEGG:dre:569087
OMA:TTTRNIS NextBio:20889500 Bgee:B0S6U7 Uniprot:B0S6U7
Length = 447
Score = 121 (47.7 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 44/132 (33%), Positives = 66/132 (50%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
L++AIVG PN GKS+L N + V+ TTR +T + LLDT G+
Sbjct: 111 LKVAIVGSPNAGKSTLTNQLLGRKLFAVSSKVHTTRSRAVGVLTENDTQIVLLDTPGLT- 169
Query: 379 TDDIVEKIGVERSEAV----ALG-ADVIIMTVSAVDGWT-SEDS-ELLNRIQSNKKSTES 431
T ++ +E S V +L AD++++ V D WT S+ S E+L + N
Sbjct: 170 TQIKAKRHQLENSLLVDPFKSLKEADLVVVLVDVSDKWTRSKLSYEVLKCLALNP----- 224
Query: 432 STPMILVINKID 443
P +LV+NK+D
Sbjct: 225 DVPAVLVLNKVD 236
Score = 42 (19.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 477 ETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIE 521
ET + ++G P G +NQ LM+ VRLK S++
Sbjct: 404 ETHMKMVIG----PGGQLITRINQEAGNDLMKIFLCNVRLKISVK 444
>UNIPROTKB|O75628 [details] [associations]
symbol:REM1 "GTP-binding protein REM 1" species:9606 "Homo
sapiens" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CH471077 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 eggNOG:COG1100 PANTHER:PTHR24070 EMBL:AL121751
HOGENOM:HOG000246961 HOVERGEN:HBG104899 InterPro:IPR017358
PIRSF:PIRSF038017 EMBL:AF084465 EMBL:AF152863 EMBL:BT020078
EMBL:BT020079 EMBL:AK313060 EMBL:BC039813 IPI:IPI00289912
RefSeq:NP_054731.2 UniGene:Hs.247729 PDB:2NZJ PDBsum:2NZJ
ProteinModelPortal:O75628 SMR:O75628 STRING:O75628
PhosphoSite:O75628 PaxDb:O75628 PRIDE:O75628 DNASU:28954
Ensembl:ENST00000201979 GeneID:28954 KEGG:hsa:28954 UCSC:uc002wwa.3
CTD:28954 GeneCards:GC20P030063 HGNC:HGNC:15922 HPA:HPA049821
MIM:610388 neXtProt:NX_O75628 PharmGKB:PA34324 InParanoid:O75628
KO:K07847 OMA:KLDESWS OrthoDB:EOG4G7C0D PhylomeDB:O75628
EvolutionaryTrace:O75628 GenomeRNAi:28954 NextBio:51769 Bgee:O75628
CleanEx:HS_REM1 Genevestigator:O75628 GermOnline:ENSG00000088320
Uniprot:O75628
Length = 298
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 50/203 (24%), Positives = 89/203 (43%)
Query: 320 QIAIVGRPNVGKSSLLNAWS-KSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRE 378
++ ++G P VGK+SL + ++ K ER + ++ DV E ++TV G TL+ + +
Sbjct: 82 RVVLLGDPGVGKTSLASLFAGKQERDLHEQLG---EDVYERTLTVDGEDTTLV----VVD 134
Query: 379 TDDIVEKIGVERSEAVAL-GADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMIL 437
T + EK+ S+ L G ++ S D + E + L RIQ + P+IL
Sbjct: 135 TWE-AEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASEL-RIQLRRTHQADHVPIIL 192
Query: 438 VINKID---CAPSASNEWNKVGNSFN-DHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGG 493
V NK D C + E F+ + T A + +L +++ + L + +
Sbjct: 193 VGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFEGVVRQLRLRRRDSAA 252
Query: 494 RRWAVNQRQCEQLMRTKEALVRL 516
+ +R R + L RL
Sbjct: 253 KEPPAPRRPASLAQRARRFLARL 275
>TIGR_CMR|SPO_0061 [details] [associations]
symbol:SPO_0061 "translation initiation factor IF-2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006847 Pfam:PF00009 Pfam:PF03144 Pfam:PF04760
PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924 GO:GO:0006184
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532
KO:K02519 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 TIGRFAMs:TIGR00487 HOGENOM:HOG000076907
ProtClustDB:PRK05306 HAMAP:MF_00100_B InterPro:IPR013575
Pfam:PF08364 OMA:EISEYRQ RefSeq:YP_165335.1
ProteinModelPortal:Q5LWL4 GeneID:3193823 KEGG:sil:SPO0061
PATRIC:23373359 Uniprot:Q5LWL4
Length = 835
Score = 123 (48.4 bits), Expect = 0.00049, P = 0.00049
Identities = 54/192 (28%), Positives = 90/192 (46%)
Query: 300 QDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEA 359
+DV + +E A D L I I+G + GK+SLL+A + + + E G T+ +
Sbjct: 317 EDVISDIEDAEED-LKPRPPVITIMGHVDHGKTSLLDA-IRDAKVVAGEAGGITQHIGAY 374
Query: 360 SV-TVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSEL 418
V T G ++ LDT G + RS + D++++ V+A D + E
Sbjct: 375 QVKTDGGATLSFLDTPGHAAFTSM-------RSRGAQV-TDIVVLVVAADDAVMPQTVEA 426
Query: 419 LNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDH-VFTCAVTGQGIQDLE 477
+N ++ + PMI+ INKID P A+ KV H V A++G+ +QD+E
Sbjct: 427 INHAKA------AGVPMIVAINKID-KPEANP--TKVRTDLLQHEVVVEAMSGE-VQDVE 476
Query: 478 TAIMKIVGLHQI 489
+ GL ++
Sbjct: 477 VSAKTGEGLDEL 488
>RGD|1304714 [details] [associations]
symbol:Eral1 "Era (G-protein)-like 1 (E. coli)" species:10116
"Rattus norvegicus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IEA;ISO;ISS] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA;ISO;ISS]
[GO:0019843 "rRNA binding" evidence=IEA;ISO;ISS] [GO:0043024
"ribosomal small subunit binding" evidence=IEA;ISO;ISS]
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 PRINTS:PR00326 PROSITE:PS50823
RGD:1304714 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743
GO:GO:0005759 GO:GO:0019843 GO:GO:0000028 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 CTD:26284
HOGENOM:HOG000245598 SUPFAM:SSF54814 eggNOG:COG1159
HOVERGEN:HBG051495 OrthoDB:EOG44XJGX EMBL:BC089885 IPI:IPI00555222
IPI:IPI00975243 RefSeq:NP_001013247.1 UniGene:Rn.99076
STRING:Q5EBA0 GeneID:363646 KEGG:rno:363646 InParanoid:Q5EBA0
NextBio:683878 Genevestigator:Q5EBA0 Uniprot:Q5EBA0
Length = 437
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 43/136 (31%), Positives = 64/136 (47%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGI-- 376
L++ ++G PN GKS+L N + V++ TTR +T V LLDT GI
Sbjct: 114 LRVVLLGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRCQALGVITEKETQVILLDTPGIIS 173
Query: 377 --RETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRI-QSNKKSTESST 433
++ +E +E AD++++ V D WT S L ++ Q K S
Sbjct: 174 PVKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKWTR--SRLSPQVLQCLTKF--SQV 229
Query: 434 PMILVINKIDCAPSAS 449
P ILV+NK+DC S
Sbjct: 230 PSILVLNKVDCLKQKS 245
>UNIPROTKB|J3QSB2 [details] [associations]
symbol:ERAL1 "GTPase Era, mitochondrial" species:9606 "Homo
sapiens" [GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AC024267 HGNC:HGNC:3424 ChiTaRS:Eral1
Ensembl:ENST00000461894 Uniprot:J3QSB2
Length = 276
Score = 118 (46.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 46/159 (28%), Positives = 72/159 (45%)
Query: 297 AMSQDVENALETANYDKLLQSG-LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRD 355
+M++D ++ L + D S L++ ++G PN GKS+L N + V+ TTR
Sbjct: 91 SMNRDEQDVLLVHHPDMPENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRC 150
Query: 356 VIEASVTVCGVPVTLLDTAGI----RETDDIVEKIGVERSEAVALGADVIIMTVSAVDGW 411
+T V LLDT GI ++ +E +E AD++++ V D W
Sbjct: 151 QALGVITEKETQVILLDTPGIISPGKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKW 210
Query: 412 TSED-SELLNRIQSNKKSTESSTPMILVINKIDCAPSAS 449
T S L R + S P +LV+NK+DC S
Sbjct: 211 TRNQLSPQLLRCLTKY----SQIPSVLVMNKVDCLKQKS 245
Score = 37 (18.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 498 VNQRQCEQLMRTKEALVRLKSSIEEELPLD 527
+N+ C ++ K L+ L +++ E +P D
Sbjct: 235 MNKVDC---LKQKSVLLELTAALTEAIPSD 261
>UNIPROTKB|P25519 [details] [associations]
symbol:hflX species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005525 "GTP binding"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0019042 "viral latency" evidence=IMP] [GO:0019843 "rRNA
binding" evidence=IDA] [GO:0043022 "ribosome binding" evidence=IDA]
HAMAP:MF_00900 InterPro:IPR006073 InterPro:IPR016496 Pfam:PF01926
PIRSF:PIRSF006809 PRINTS:PR00326 GO:GO:0005525 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009408 GO:GO:0043022 EMBL:U14003
GO:GO:0019843 InterPro:IPR009022 SUPFAM:SSF54980 eggNOG:COG2262
HOGENOM:HOG000260368 PANTHER:PTHR10229 TIGRFAMs:TIGR03156
EMBL:U00005 KO:K03665 InterPro:IPR025121 Pfam:PF13167 EMBL:D00743
PIR:S56398 RefSeq:NP_418594.1 RefSeq:YP_492315.1
ProteinModelPortal:P25519 SMR:P25519 DIP:DIP-9895N PRIDE:P25519
EnsemblBacteria:EBESCT00000002732 EnsemblBacteria:EBESCT00000002733
EnsemblBacteria:EBESCT00000002734 EnsemblBacteria:EBESCT00000015512
GeneID:12932258 GeneID:948688 KEGG:ecj:Y75_p4059 KEGG:eco:b4173
PATRIC:32123919 EchoBASE:EB0432 EcoGene:EG10437 OMA:IDADEIP
ProtClustDB:PRK11058 BioCyc:EcoCyc:EG10437-MONOMER
BioCyc:ECOL316407:JW4131-MONOMER BioCyc:MetaCyc:EG10437-MONOMER
Genevestigator:P25519 Uniprot:P25519
Length = 426
Score = 118 (46.6 bits), Expect = 0.00067, P = 0.00067
Identities = 54/210 (25%), Positives = 90/210 (42%)
Query: 274 EARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSS 333
E +L+ D + L +V +I + + VE E ++ +++VG N GKS+
Sbjct: 157 ETQLETDRRL--LRNRIV--QIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKST 212
Query: 334 LLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLL-DTAG-IRETD-DIVEKIGVER 390
L N +++ R + T D + V V T+L DT G IR D+V
Sbjct: 213 LFNRITEA-RVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATL 271
Query: 391 SEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASN 450
E A +++ + A D E+ E +N + + E P +LV+NKID
Sbjct: 272 QETRQ--ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE--IPTLLVMNKIDMLEDFEP 327
Query: 451 EWNKVGNSFNDHVFTCAVTGQGIQDLETAI 480
++ + + V+ A TG GI L A+
Sbjct: 328 RIDRDEENKPNRVWLSAQTGAGIPQLFQAL 357
>UNIPROTKB|O75616 [details] [associations]
symbol:ERAL1 "GTPase Era, mitochondrial" species:9606 "Homo
sapiens" [GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0003723 "RNA binding" evidence=NAS] [GO:0005525 "GTP binding"
evidence=NAS] [GO:0043024 "ribosomal small subunit binding"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=IDA]
[GO:0019843 "rRNA binding" evidence=IDA] [GO:0000028 "ribosomal
small subunit assembly" evidence=IMP] InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 PRINTS:PR00326 PROSITE:PS50823 EMBL:AF082657
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743 GO:GO:0005759
EMBL:CH471159 GO:GO:0019843 GO:GO:0000028 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 CTD:26284 OMA:ITREQLF
SUPFAM:SSF54814 eggNOG:COG1159 HOVERGEN:HBG051495 OrthoDB:EOG44XJGX
EMBL:AF082658 EMBL:AB049388 EMBL:AY007435 EMBL:AK023342
EMBL:AC024267 EMBL:BC019094 IPI:IPI00026512 IPI:IPI00216548
RefSeq:NP_005693.1 UniGene:Hs.3426 ProteinModelPortal:O75616
SMR:O75616 IntAct:O75616 STRING:O75616 PhosphoSite:O75616
PaxDb:O75616 PRIDE:O75616 DNASU:26284 Ensembl:ENST00000254928
GeneID:26284 KEGG:hsa:26284 UCSC:uc002hcx.1 UCSC:uc002hcy.1
GeneCards:GC17P027182 HGNC:HGNC:3424 HPA:HPA021425 HPA:HPA024423
MIM:607435 neXtProt:NX_O75616 PharmGKB:PA27843 InParanoid:O75616
PhylomeDB:O75616 ChiTaRS:Eral1 GenomeRNAi:26284 NextBio:48609
Bgee:O75616 CleanEx:HS_ERAL1 Genevestigator:O75616
GermOnline:ENSG00000132591 Uniprot:O75616
Length = 437
Score = 118 (46.6 bits), Expect = 0.00070, P = 0.00070
Identities = 46/159 (28%), Positives = 72/159 (45%)
Query: 297 AMSQDVENALETANYDKLLQSG-LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRD 355
+M++D ++ L + D S L++ ++G PN GKS+L N + V+ TTR
Sbjct: 91 SMNRDEQDVLLVHHPDMPENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRC 150
Query: 356 VIEASVTVCGVPVTLLDTAGI----RETDDIVEKIGVERSEAVALGADVIIMTVSAVDGW 411
+T V LLDT GI ++ +E +E AD++++ V D W
Sbjct: 151 QALGVITEKETQVILLDTPGIISPGKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKW 210
Query: 412 TSED-SELLNRIQSNKKSTESSTPMILVINKIDCAPSAS 449
T S L R + S P +LV+NK+DC S
Sbjct: 211 TRNQLSPQLLRCLTKY----SQIPSVLVMNKVDCLKQKS 245
>UNIPROTKB|A5PK43 [details] [associations]
symbol:ERAL1 "GTPase Era, mitochondrial" species:9913 "Bos
taurus" [GO:0000028 "ribosomal small subunit assembly"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS] [GO:0043024
"ribosomal small subunit binding" evidence=ISS] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 PRINTS:PR00326
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743
GO:GO:0005759 GO:GO:0019843 GO:GO:0000028 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 CTD:26284
GeneTree:ENSGT00390000013800 HOGENOM:HOG000245598 OMA:ITREQLF
SUPFAM:SSF54814 EMBL:BC142348 IPI:IPI00703091 RefSeq:NP_001092492.1
UniGene:Bt.12454 ProteinModelPortal:A5PK43 STRING:A5PK43
PRIDE:A5PK43 Ensembl:ENSBTAT00000020770 GeneID:523344
KEGG:bta:523344 eggNOG:COG1159 HOVERGEN:HBG051495 InParanoid:A5PK43
OrthoDB:EOG44XJGX NextBio:20873720 Uniprot:A5PK43
Length = 437
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 40/136 (29%), Positives = 66/136 (48%)
Query: 319 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGI-- 376
L++ ++G PN GKS+L N + V++ TTR +T V LLDT G+
Sbjct: 114 LRVVLLGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRSQALGVITEKETQVILLDTPGLIS 173
Query: 377 --RETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTE-SST 433
++ +E +E AD++++ V D WT ++L ++ + T+ S
Sbjct: 174 PAKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKWTR--NQLSPQVL--RCLTQFSQV 229
Query: 434 PMILVINKIDCAPSAS 449
P ILV+NK+DC S
Sbjct: 230 PSILVMNKVDCLKQKS 245
>UNIPROTKB|I3L5J7 [details] [associations]
symbol:LOC100623430 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 PANTHER:PTHR24070 InterPro:IPR017358
PIRSF:PIRSF038017 OMA:KLDESWS GeneTree:ENSGT00700000104060
Ensembl:ENSSSCT00000025234 Uniprot:I3L5J7
Length = 289
Score = 114 (45.2 bits), Expect = 0.00091, P = 0.00091
Identities = 41/128 (32%), Positives = 61/128 (47%)
Query: 320 QIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLL--DTAGIR 377
++ ++G P VGK+SL N ++ + + E G DV E ++TV G TLL DT
Sbjct: 82 RVVLLGDPGVGKTSLANLFAGKQERDLHEPLG--EDVYERTLTVDGEDTTLLVMDTWEAE 139
Query: 378 ETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMIL 437
+ DD + + +G+ +I+ A G SEL RIQ + P+IL
Sbjct: 140 KPDD-----SWSQESCLQVGSAYVIVYSIADRGSFESASEL--RIQLRRTHQADHVPIIL 192
Query: 438 VINKIDCA 445
V NK D A
Sbjct: 193 VGNKADLA 200
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 564 526 0.00091 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 95
No. of states in DFA: 615 (65 KB)
Total size of DFA: 279 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.58u 0.15s 43.73t Elapsed: 00:00:02
Total cpu time: 43.60u 0.15s 43.75t Elapsed: 00:00:02
Start: Thu May 9 18:23:39 2013 End: Thu May 9 18:23:41 2013