BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008468
(564 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8YN91|MNME_NOSS1 tRNA modification GTPase MnmE OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=mnmE PE=1 SV=1
Length = 459
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/474 (48%), Positives = 319/474 (67%), Gaps = 23/474 (4%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
TIAAI T+I G+VGIVR+SG A+ I +F + G W SH + YG
Sbjct: 6 TIAAIATAIVPQQGSVGIVRVSGSQAIAIAQTLFD--------APGKQVWE--SHRILYG 55
Query: 154 VVLDRH---GNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
+ RH +VDE L + M APRSYTREDVVE CHG + +++VL+ CLE+GA LAQ
Sbjct: 56 YI--RHPQTRQIVDEALLLLMKAPRSYTREDVVEFHCHGGIIAVQQVLQLCLESGARLAQ 113
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFTLRAFLNGRLDL+QAE++ L+ A+S AA ALAG+QG + + +RA C+++L
Sbjct: 114 PGEFTLRAFLNGRLDLTQAESIADLVGARSPQAAQTALAGLQGKLAHPIRQLRANCLDIL 173
Query: 271 TEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVG 330
EIEAR+DF++++PPL+ ++ I ++ ++ L T + +LL++GL++AIVGRPNVG
Sbjct: 174 AEIEARIDFEEDLPPLDDEAIISDIENIAAEISQLLATKDKGELLRTGLKVAIVGRPNVG 233
Query: 331 KSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVER 390
KSSLLNAWS+S+RAIVT++ GTTRDV+E+ + V G+PV +LDTAGIRET D VEKIGVER
Sbjct: 234 KSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPVQVLDTAGIRETSDQVEKIGVER 293
Query: 391 SEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASN 450
S A AD++++T+ A GWT+ D E+ +++ P+ILV+NKID
Sbjct: 294 SRQAANTADLVLLTIDAATGWTTGDQEIYEQVKHR--------PLILVMNKIDLVEKQLI 345
Query: 451 EWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTK 510
+ + V T A QGI LETAI++IV ++ A A+NQRQ L + K
Sbjct: 346 TSLEYPENITQIVHTAAAQKQGIDSLETAILEIVQTGKVQAADMDLAINQRQAAALTQAK 405
Query: 511 EALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+L +++++I ++LPLDFWTIDLR A ALG+I+GE+++E VL IF +FCIGK
Sbjct: 406 MSLEQVQATITQQLPLDFWTIDLRGAIQALGEITGEEVTESVLDRIFSRFCIGK 459
>sp|Q3MBM5|MNME_ANAVT tRNA modification GTPase MnmE OS=Anabaena variabilis (strain ATCC
29413 / PCC 7937) GN=mnmE PE=3 SV=1
Length = 463
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/477 (48%), Positives = 321/477 (67%), Gaps = 29/477 (6%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
TIAAI T+I G+VGIVR+SG A+ I +F + G W SH + YG
Sbjct: 10 TIAAIATAIVPQQGSVGIVRVSGSQAIAIAQTLFH--------APGKQVWE--SHRILYG 59
Query: 154 VVLDRH---GNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
+ RH +VDE L + M APRSYTREDVVE CHG + +++VL+ CLE GA LAQ
Sbjct: 60 YI--RHPQTRQIVDEALLLLMKAPRSYTREDVVEFHCHGGIMAVQQVLQLCLEGGARLAQ 117
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFTLRAFLNGRLDL+QAE++ L+ A+S AA ALAG+QG + + +RA C+++L
Sbjct: 118 PGEFTLRAFLNGRLDLTQAESIADLVGARSPQAAQTALAGLQGKLAHPIRQLRANCLDIL 177
Query: 271 TEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVG 330
EIEAR+DF++++PPL+ ++ I ++ ++ L T + +LL++GL++AIVGRPNVG
Sbjct: 178 AEIEARIDFEEDLPPLDDEKIISDIENIAAEISQLLATKDKGELLRTGLKVAIVGRPNVG 237
Query: 331 KSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVER 390
KSSLLNAWS+S+RAIVT++ GTTRDV+E+ + V G+PV +LDTAGIRET D VEKIGVER
Sbjct: 238 KSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPVQVLDTAGIRETSDQVEKIGVER 297
Query: 391 SEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPS--- 447
S A AD++++T+ A GWT+ D E+ +++ P+ILV+NKID
Sbjct: 298 SRQAANTADLVLLTIDAATGWTTGDQEIYEQVKHR--------PLILVMNKIDLVDKKLI 349
Query: 448 ASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLM 507
S E+ K + V T A QGI LETAI++IV ++ A A+NQRQ L
Sbjct: 350 TSLEYPK---NITQIVHTAAAQKQGIDALETAILEIVQTGKVKAADMDLAINQRQAAALT 406
Query: 508 RTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ K +L +++++I ++LPLDFWTIDLR A ALG+I+GE+++E VL IF +FCIGK
Sbjct: 407 QAKISLEQVQATITQQLPLDFWTIDLRGAIQALGEITGEEVTESVLDRIFSRFCIGK 463
>sp|Q8KPU2|MNME_SYNE7 tRNA modification GTPase MnmE OS=Synechococcus elongatus (strain
PCC 7942) GN=mnmE PE=3 SV=3
Length = 462
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/473 (49%), Positives = 320/473 (67%), Gaps = 20/473 (4%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
TIAAI T+I G+VGIVRLSG A +I ++F+ +G W SH + YG
Sbjct: 8 TIAAIATAIVPQQGSVGIVRLSGAAATEIARQIFQ--------IAGQQPWE--SHRILYG 57
Query: 154 VVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPG 212
+ D G +VDE L +PMLAPRSYTREDVVEL CHG + +++ L+ C+ AGA LA+PG
Sbjct: 58 YIRDPESGRLVDEALLLPMLAPRSYTREDVVELHCHGGLMPVQQTLQLCIRAGARLAEPG 117
Query: 213 EFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTE 272
EFTLRAFLNGRLDLSQAE++ LISA+S AA AAL +QG + +R +C+++L E
Sbjct: 118 EFTLRAFLNGRLDLSQAESIADLISAQSPQAAQAALGSLQGKLGHPIRQLRDRCLDILAE 177
Query: 273 IEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKS 332
+EAR+DF+D++PPL+L + ++ A D++ L TA+ +LL++GL+IAIVGRPNVGKS
Sbjct: 178 VEARIDFEDDLPPLDLEAIAAQLTAAGADMQAILSTADRGELLRTGLKIAIVGRPNVGKS 237
Query: 333 SLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSE 392
SLLNAWS+ +RAIVT++ GTTRD++E+ + V G+PV +LDTAGIRET D VE+IGVERS
Sbjct: 238 SLLNAWSRCDRAIVTDLPGTTRDLVESQLIVGGIPVQVLDTAGIRETSDQVEQIGVERSR 297
Query: 393 AVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEW 452
A AD++++T+ A GW++ED + + S P++LVINK D A
Sbjct: 298 RAAQSADLVLLTIDASAGWSAEDQTIWEAV--------SDRPILLVINKRDRLSEAERHA 349
Query: 453 NKV-GNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKE 511
+ F V+T A QGI+DLE AI+ VG + + WA+NQRQ L +
Sbjct: 350 IALPQQEFKAIVWTAAAQQQGIEDLEAAILAAVGTGDLTSANWDWALNQRQVAALTTAQT 409
Query: 512 ALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
AL R++ +++ +LPLDFWTIDLR+A ALG I+GE+I+E +L IF +FCIGK
Sbjct: 410 ALRRVEETLQAQLPLDFWTIDLREAIAALGSITGEEIAESMLDLIFSRFCIGK 462
>sp|B8HSJ3|MNME_CYAP4 tRNA modification GTPase MnmE OS=Cyanothece sp. (strain PCC 7425 /
ATCC 29141) GN=mnmE PE=3 SV=1
Length = 460
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/473 (50%), Positives = 318/473 (67%), Gaps = 19/473 (4%)
Query: 93 STIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEY 152
TIAAI T+I G++ IVRLSG AV I R+F + G W SH + Y
Sbjct: 6 QTIAAIATAIVPQQGSIAIVRLSGSEAVAIAQRLFI--------APGQQVWE--SHRILY 55
Query: 153 GVVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQP 211
G V + R G VDE L + MLAPRSYT+EDVVE CHG + +++VL+ CLEAGA LAQP
Sbjct: 56 GYVCNPRTGQRVDEALLLLMLAPRSYTKEDVVEFHCHGGMIAVQQVLQLCLEAGAVLAQP 115
Query: 212 GEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLT 271
GEFTLRAFL+GRLDL+QAE+V L+ AKS AA AALAG+QG + +R CI++L
Sbjct: 116 GEFTLRAFLHGRLDLTQAESVADLVGAKSPQAAQAALAGLQGKLIQPLQQLRRTCIDILA 175
Query: 272 EIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGK 331
EIEAR+DF++++PPL+LN + +I +V L TA+ +LL++GL++AIVGRPNVGK
Sbjct: 176 EIEARIDFEEDLPPLDLNQISSQIQHSLTEVNRILATADRGELLRTGLKVAIVGRPNVGK 235
Query: 332 SSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERS 391
SSLLNAWS+S+RAIVTE+ GTTRDV+E+ + V G+PV +LDTAGIRET D VE+IGVERS
Sbjct: 236 SSLLNAWSRSDRAIVTELPGTTRDVVESYLVVGGIPVQVLDTAGIRETSDQVEQIGVERS 295
Query: 392 EAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNE 451
A AD++++ + A GWT+ED + ++Q +ILVINKID A
Sbjct: 296 HKAAQAADLVLLVIDAQTGWTAEDQAIYTQVQERS--------LILVINKIDLVDQAFQP 347
Query: 452 WNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKE 511
+ + ++ T A QGI+DLE+AI+ V ++ WA+NQRQ L R K
Sbjct: 348 QACLPDPALTYLCTAAAQNQGIEDLESAILSKVQGGELEGANLDWAINQRQAAALTRAKL 407
Query: 512 ALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+L ++ +I +LPLDFWTIDLR+A ALG+I+GE+++E VL IF +FCIGK
Sbjct: 408 SLENVQETIANQLPLDFWTIDLREAIRALGEITGEEVTESVLDQIFSRFCIGK 460
>sp|Q10VJ7|MNME_TRIEI tRNA modification GTPase MnmE OS=Trichodesmium erythraeum (strain
IMS101) GN=mnmE PE=3 SV=1
Length = 467
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/476 (48%), Positives = 321/476 (67%), Gaps = 22/476 (4%)
Query: 93 STIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEY 152
+TIAAI T+I G+VGIVR+SG A+ I +F + G W +H + Y
Sbjct: 10 NTIAAIATAIVPQQGSVGIVRMSGSEAMKIAQTLFH--------APGKQVWE--THHILY 59
Query: 153 GVVLDRH-GNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQP 211
G + H G +VDE L + M APRSYTREDVVE CHG + +++VL+ C+EAGA LAQP
Sbjct: 60 GYIRHPHTGQLVDETLLLIMKAPRSYTREDVVEFHCHGGIIAIQQVLQLCIEAGAELAQP 119
Query: 212 GEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLT 271
GEFTLRAFLNGRLDL+QAE++ +L+ ++S AAA ALAG+QG +S + +RA C+++L
Sbjct: 120 GEFTLRAFLNGRLDLTQAESIAELVGSQSPAAAQVALAGLQGKLASPIRHLRACCLDILA 179
Query: 272 EIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGK 331
EIEAR+DF++++PPL+ + + K+ + D+ L TA+ +LL++GL++AI+GRPNVGK
Sbjct: 180 EIEARIDFEEDLPPLDESEISQKLDDILVDLSMVLATASRGELLRTGLKVAIIGRPNVGK 239
Query: 332 SSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERS 391
SSLLNAWS S+RAIVT++ GTTRDV+E+ + V G+PV +LDTAGIRET+D VEKIGVERS
Sbjct: 240 SSLLNAWSHSDRAIVTDLPGTTRDVVESQLVVGGIPVQVLDTAGIRETEDRVEKIGVERS 299
Query: 392 EAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNE 451
A AD++++T+ A GWT D + +++ +IL+INK+D +E
Sbjct: 300 CQAAESADIVLLTIDAQVGWTELDEVIYQQVKHRF--------LILIINKVDQVDLVHSE 351
Query: 452 WNK---VGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMR 508
+ + + V T A+ QGI++LE AI+ V L + +AVNQRQ L R
Sbjct: 352 LIRSIFYPETIKNVVATAAINNQGIEELEAAILNAVNLDNVQPENLDFAVNQRQAAALTR 411
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
K AL + ++I+ LPLDFWTIDLR + ALG+++GED++E VL IF +FCIGK
Sbjct: 412 AKIALEQCLNTIKNNLPLDFWTIDLRGSIYALGEVTGEDVTESVLDIIFSRFCIGK 467
>sp|Q5N638|MNME_SYNP6 tRNA modification GTPase MnmE OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=mnmE PE=3 SV=2
Length = 462
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/473 (49%), Positives = 318/473 (67%), Gaps = 20/473 (4%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
TIAAI T+I G+VGIVRLSG A +I ++F+ +G W SH + YG
Sbjct: 8 TIAAIATAIVPQQGSVGIVRLSGAAATEIARQIFQ--------IAGQQPWE--SHRILYG 57
Query: 154 VVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPG 212
+ D G +VDE L +PMLAPRSYTREDVVEL CHG + +++ L+ C+ AGA LA+PG
Sbjct: 58 YIRDPESGRLVDEALLLPMLAPRSYTREDVVELHCHGGLMPVQQTLQLCIRAGARLAEPG 117
Query: 213 EFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTE 272
EFTLRAFLNGRLDLSQAE++ LISA+S AA AAL +QG + +R +C+++L E
Sbjct: 118 EFTLRAFLNGRLDLSQAESIADLISAQSPQAAQAALGSLQGKLGHPIRQLRDRCLDILAE 177
Query: 273 IEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKS 332
+EAR+DF+D++PPL+L + ++ A D++ L TA+ +LL++GL+IAIVGRPNVGKS
Sbjct: 178 VEARIDFEDDLPPLDLEAIAAQLTAAGADMQAILSTADRGELLRTGLKIAIVGRPNVGKS 237
Query: 333 SLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSE 392
SLLNAWS+ +RAIVT++ G TRD++E+ + V G+PV +LDTAGIRET D VE+IGVERS
Sbjct: 238 SLLNAWSRCDRAIVTDLPGRTRDLVESQLIVGGIPVQVLDTAGIRETSDQVEQIGVERSR 297
Query: 393 AVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEW 452
A AD++++T+ A GW++ED + + S P++LVINK D A
Sbjct: 298 RAAQSADLVLLTIDASAGWSAEDQTIWEAV--------SDRPILLVINKRDRLSEAERHA 349
Query: 453 NKV-GNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKE 511
+ F V+T A +GI+DLE AI+ VG + + WA+NQRQ L +
Sbjct: 350 IALPQQEFKAIVWTAAAQQKGIEDLEAAILAAVGTGDLTSANWDWALNQRQVAALTTAQT 409
Query: 512 ALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
AL R++ +++ +LPLDFWTIDLR+A ALG I+GE I+E +L IF +FCIGK
Sbjct: 410 ALRRVEETLQAQLPLDFWTIDLREAIAALGSITGEGIAESMLDLIFSRFCIGK 462
>sp|B0JVV0|MNME_MICAN tRNA modification GTPase MnmE OS=Microcystis aeruginosa (strain
NIES-843) GN=mnmE PE=3 SV=1
Length = 457
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/477 (48%), Positives = 314/477 (65%), Gaps = 26/477 (5%)
Query: 91 TFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVV 150
T TIAAI T+I G++GIVRLSG AV I R+F ++K W+ SH +
Sbjct: 4 TGDTIAAIATAIVPEQGSIGIVRLSGSEAVAIARRLFHSPNRQK--------WQ--SHRL 53
Query: 151 EYGVVLDRHGN---VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGAT 207
YG + RH ++DE L + MLAPRS+TREDVVE CHG + +++VL+ CLE GA
Sbjct: 54 LYGYI--RHPQSQAIIDEALLLLMLAPRSFTREDVVEFHCHGGIMPVQQVLQLCLENGAR 111
Query: 208 LAQPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCI 267
LAQ GEF+LRAFLNGR+DL+QAE+V L+ A+S AA ALAG+QG + + +RA C+
Sbjct: 112 LAQAGEFSLRAFLNGRIDLTQAESVVDLVGARSPQAAQFALAGLQGKLAQPIRHLRATCL 171
Query: 268 ELLTEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRP 327
++L EIEAR+DF++++PPL+ V+ I + V L TA +LL+SGL++AIVGRP
Sbjct: 172 DILAEIEARIDFEEDLPPLDHAAVLHSIEQVFCQVNLILATAERGELLRSGLKVAIVGRP 231
Query: 328 NVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIG 387
NVGKSSLLNAWS+S+RAIVT++ GTTRD++E+ + V G+PV +LDTAGIR D VE+IG
Sbjct: 232 NVGKSSLLNAWSRSDRAIVTDLPGTTRDIVESQLVVAGIPVQVLDTAGIRSASDRVEQIG 291
Query: 388 VERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPS 447
VERS A AD++++TVSA GWT ED E+ + + +ILVINKID A
Sbjct: 292 VERSRQTARSADLVLLTVSAESGWTQEDEEIYRSVSDRR--------LILVINKIDLANP 343
Query: 448 ASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLM 507
+ + V A QGI+DLE +++ V ++ A A+NQRQ L
Sbjct: 344 ETVIYPA---EIKRVVKLSAAQNQGIEDLEKSLINAVQNQELQAANLDLAINQRQAAALT 400
Query: 508 RTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
R K AL ++K +I++ LP DFW+IDLR A +LG+I+GE+++E VL IF +FCIGK
Sbjct: 401 RAKIALQQVKKTIDQNLPFDFWSIDLRTAIQSLGEITGEEVTESVLDRIFSRFCIGK 457
>sp|P0C8P1|MNME_THEEB tRNA modification GTPase MnmE OS=Thermosynechococcus elongatus
(strain BP-1) GN=mnmE PE=3 SV=1
Length = 469
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 319/474 (67%), Gaps = 14/474 (2%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
TIAAI T+I G++GIVRLSG AV I +F+ + G W SH + YG
Sbjct: 7 TIAAIATAIVPQQGSIGIVRLSGAKAVAIAQSLFE--------APGKQPWE--SHRILYG 56
Query: 154 VVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPG 212
V D + VDE L + MLAPRSYTREDVVE CHG + ++RVL+ C+ AGA LA PG
Sbjct: 57 YVRDPQTKERVDEALLLLMLAPRSYTREDVVEFHCHGGLIPVQRVLQLCVAAGARLADPG 116
Query: 213 EFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTE 272
EFTLRAFLNGRLDL+QAE+V +L++A+S AA ALAG+ G + + +R C+ LL E
Sbjct: 117 EFTLRAFLNGRLDLTQAESVAELVAAQSTTAAQIALAGLTGKLARPLQQIRQTCLSLLAE 176
Query: 273 IEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKS 332
IEARLDF DE+PPL+ + ++I + VE L TA L+++GL++AIVGRPNVGKS
Sbjct: 177 IEARLDFTDELPPLDPAAIAEQIRQLQHQVEAFLATAERGALIRTGLKVAIVGRPNVGKS 236
Query: 333 SLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSE 392
SLLNAWS+S+RAIVT++ GTTRD++E+ + V G+P+ +LDTAGIRETD++VE+IGV+RS
Sbjct: 237 SLLNAWSRSDRAIVTDLPGTTRDIVESQLVVGGIPIQVLDTAGIRETDNLVEQIGVQRSR 296
Query: 393 AVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEW 452
AL AD+I++ + A GWT+ D + +++Q ++ ++ +++V+NK D S + E
Sbjct: 297 QAALSADLILLVIDASQGWTAADQAIYDQLQLKQRRQQAPQSVLVVLNKADLL-SETTEV 355
Query: 453 NKVGNSFN--DHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTK 510
+ V A++ +GI+ LE AI+ +V + A +A+NQRQ L +
Sbjct: 356 KDIPLPIAPIPTVLLSALSQRGIEQLEDAILHLVQGQGVSAANLDFAINQRQAGLLEQVH 415
Query: 511 EALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
++L + ++I+ +LPLDFWTIDL AA ALG ++GE+++E VL+ IF +FCIGK
Sbjct: 416 QSLNHVLAAIDAQLPLDFWTIDLHAAARALGTLTGEEVTESVLTEIFSRFCIGK 469
>sp|P0C8N9|MNME_SYNEL tRNA modification GTPase MnmE OS=Synechococcus elongatus GN=mnmE
PE=3 SV=1
Length = 469
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 319/474 (67%), Gaps = 14/474 (2%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
TIAAI T+I G++GIVRLSG AV I +F+ + G W SH + YG
Sbjct: 7 TIAAIATAIVPQQGSIGIVRLSGAKAVAIAQSLFE--------APGKQPWE--SHRILYG 56
Query: 154 VVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPG 212
V D + VDE L + MLAPRSYTREDVVE CHG + ++RVL+ C+ AGA LA PG
Sbjct: 57 YVRDPQTKERVDEALLLLMLAPRSYTREDVVEFHCHGGLIPVQRVLQLCVAAGARLADPG 116
Query: 213 EFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTE 272
EFTLRAFLNGRLDL+QAE+V +L++A+S AA ALAG+ G + + +R C+ LL E
Sbjct: 117 EFTLRAFLNGRLDLTQAESVAELVAAQSTTAAQIALAGLTGKLARPLQQIRQTCLSLLAE 176
Query: 273 IEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKS 332
IEARLDF DE+PPL+ + ++I + VE L TA L+++GL++AIVGRPNVGKS
Sbjct: 177 IEARLDFTDELPPLDPAAIAEQIRQLQHQVEAFLATAERGALIRTGLKVAIVGRPNVGKS 236
Query: 333 SLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSE 392
SLLNAWS+S+RAIVT++ GTTRD++E+ + V G+P+ +LDTAGIRETD++VE+IGV+RS
Sbjct: 237 SLLNAWSRSDRAIVTDLPGTTRDIVESQLVVGGIPIQVLDTAGIRETDNLVEQIGVQRSR 296
Query: 393 AVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEW 452
AL AD+I++ + A GWT+ D + +++Q ++ ++ +++V+NK D S + E
Sbjct: 297 QAALSADLILLVIDASQGWTAADQAIYDQLQLKQRRQQAPQSVLVVLNKADLL-SETTEV 355
Query: 453 NKVGNSFN--DHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTK 510
+ V A++ +GI+ LE AI+ +V + A +A+NQRQ L +
Sbjct: 356 KDIPLPIAPIPTVLLSALSQRGIEQLEDAILHLVQGQGVSAANLDFAINQRQAGLLEQVH 415
Query: 511 EALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
++L + ++I+ +LPLDFWTIDL AA ALG ++GE+++E VL+ IF +FCIGK
Sbjct: 416 QSLNHVLAAIDAQLPLDFWTIDLHAAARALGTLTGEEVTESVLTEIFSRFCIGK 469
>sp|B0CBB0|MNME_ACAM1 tRNA modification GTPase MnmE OS=Acaryochloris marina (strain MBIC
11017) GN=mnmE PE=3 SV=1
Length = 455
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/459 (49%), Positives = 307/459 (66%), Gaps = 22/459 (4%)
Query: 107 GAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLD-RHGNVVDE 165
G++GIVRLSG AV I ++F+ + G W SH V YG + ++DE
Sbjct: 18 GSIGIVRLSGVEAVSIAKQLFQ--------TPGKQQWE--SHRVLYGYIQQPLTQQIIDE 67
Query: 166 VLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLD 225
L + MLAPRSYTREDVVE CHG + +++VL ACL+AGA LAQPGEFTLRAFLNGRLD
Sbjct: 68 GLLLLMLAPRSYTREDVVEFHCHGGMIAVQQVLEACLQAGAELAQPGEFTLRAFLNGRLD 127
Query: 226 LSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPP 285
L+QAE V L+ A+S AA AALAG+QG +S + +R +C++ L E+EAR+DF+D++PP
Sbjct: 128 LTQAEGVADLVGARSPQAAQAALAGVQGKLASPIRELRQRCLDTLAEVEARVDFEDDLPP 187
Query: 286 LNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAI 345
L+ V ++ + ++ L TA+ +LL++GL +AI+GRPNVGKSSLLNAW + +RAI
Sbjct: 188 LDEAGVQAELQDIHATLQAILATADQGELLRNGLTVAIIGRPNVGKSSLLNAWCRCDRAI 247
Query: 346 VTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTV 405
VT++ GTTRDV+E+ + V G+P+ +LDTAGIRET+D VE+IGV RS A AD++++T+
Sbjct: 248 VTDLPGTTRDVVESQLVVGGIPIQVLDTAGIRETEDQVEQIGVTRSHQAAQSADLVLLTI 307
Query: 406 SAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDHVFT 465
A GWTS+D +L Q P+IL++NK+D P E + V T
Sbjct: 308 DASVGWTSDDQQLYQAFQ--------DLPLILIVNKVDLVP---QEQVVYPEAIAQVVST 356
Query: 466 CAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELP 525
A QGI +LETAI++ V + A WA+NQRQ L + + AL ++ +I ++LP
Sbjct: 357 IAAQNQGISELETAILETVQTQSLKAANLDWAINQRQAAALQKAQAALEHVQGAIADQLP 416
Query: 526 LDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
LDFWTIDLR A ALG+I+GEDI+E VL IF +FCIGK
Sbjct: 417 LDFWTIDLRGAIQALGEITGEDITESVLDRIFSRFCIGK 455
>sp|Q7NHT3|MNME_GLOVI tRNA modification GTPase MnmE OS=Gloeobacter violaceus (strain PCC
7421) GN=mnmE PE=3 SV=1
Length = 453
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/472 (47%), Positives = 307/472 (65%), Gaps = 23/472 (4%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
TI AI T+I G+VGIVRLSG A+ + RVF+ K+ +S H + YG
Sbjct: 4 TICAIATAIVPQQGSVGIVRLSGSEALALAKRVFRLRGKQAFES----------HRIHYG 53
Query: 154 VVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGE 213
LD G ++DE L + M APRS+TREDVVE CHG ++++LR C+E GA LA+PGE
Sbjct: 54 HFLDADGGILDECLVLYMQAPRSFTREDVVEFHCHGGIAVIQQILRRCVELGARLARPGE 113
Query: 214 FTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEI 273
FTLRAFLNGR+DL++AE V +L+SA+S AA A+ G+ G + V +R+ C++LL E+
Sbjct: 114 FTLRAFLNGRIDLTEAEAVAELVSARSPEAARLAVGGLAGKLAGEVRQLRSGCLDLLAEL 173
Query: 274 EARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSS 333
EARLDF+D++PPL+ V I + T+ +LL++GL++AIVGRPNVGKSS
Sbjct: 174 EARLDFEDDLPPLDTGAVRANIGQSLAHARRLMATSTRGELLRTGLKVAIVGRPNVGKSS 233
Query: 334 LLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEA 393
LLNAWS+++RAIVT++ GTTRDV+E+ + V G+PV +LDTAGIRE D VE+IG+ERS A
Sbjct: 234 LLNAWSRTDRAIVTDLPGTTRDVVESMLNVQGIPVQVLDTAGIREATDTVERIGIERSHA 293
Query: 394 VALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDC-APSASNEW 452
A AD++++ + +GWT DS++ +++ P+I+V+NK D P
Sbjct: 294 AAREADLVLLVIDRTEGWTCADSDIFAQVRER--------PVIVVVNKSDLEGPPVYTPS 345
Query: 453 NKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEA 512
V + V T A G GI LE AI+ +G +AVN+RQ E L+R + A
Sbjct: 346 RGVLAT----VPTAAPVGDGIDALEGAILAALGQEAFSVADGDFAVNERQYEALVRAEVA 401
Query: 513 LVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
LVR+ ++E LP+DFWTIDLR AA ALG+++GE ++E VL IF KFCIGK
Sbjct: 402 LVRVVETVEAALPIDFWTIDLRAAAHALGEVTGESVTEAVLERIFSKFCIGK 453
>sp|B1XKC3|MNME_SYNP2 tRNA modification GTPase MnmE OS=Synechococcus sp. (strain ATCC
27264 / PCC 7002 / PR-6) GN=mnmE PE=3 SV=1
Length = 460
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 323/474 (68%), Gaps = 22/474 (4%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
TI AI +++ G++GIVRLSG A+ P+ ++ + G +W SH + YG
Sbjct: 6 TIVAIASAVVPNQGSIGIVRLSGAAAL--------PIARQLFQDPGQQTWE--SHRILYG 55
Query: 154 VVLDRH---GNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
V RH +VDE L + MLAPRS+T EDVVE CHG + +++VL+ CL AGA LA
Sbjct: 56 YV--RHPQTQTIVDEALLLLMLAPRSFTAEDVVEFHCHGGIIPVQQVLQLCLGAGARLAT 113
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFTLRAFLNGR+DL+QAE+V +L+ AKS +A ALAGIQG + + +R +C+++L
Sbjct: 114 PGEFTLRAFLNGRIDLTQAESVAELVGAKSPQSAQVALAGIQGKLAQPIQQLRGQCLDIL 173
Query: 271 TEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVG 330
E+EAR+DF+D++PPL+ + + + + V L+T++ +LL++GL++AIVGRPNVG
Sbjct: 174 AEVEARIDFEDDLPPLDEPQIQRDLTQVLEKVAQILQTSDRGELLRTGLKVAIVGRPNVG 233
Query: 331 KSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVER 390
KSSLLNAWS+S+RAIVT++ GTTRDV+E+ + V G+PV +LDTAGIR+T+D VEKIGV R
Sbjct: 234 KSSLLNAWSRSDRAIVTDLPGTTRDVVESQLVVQGIPVQVLDTAGIRDTEDAVEKIGVAR 293
Query: 391 SEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASN 450
S A + AD+I+ T+ A GWT+ D E+ RI +T+++ P+IL++NKID +
Sbjct: 294 SLAASQQADLILFTIDAAVGWTAADQEIFQRI----VATKANQPLILILNKIDIGQPEAI 349
Query: 451 EWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTK 510
E + V T A QG+ +LETAI +V ++ A +A+NQRQ L + +
Sbjct: 350 E---IPPQVQGVVKTAAAQHQGVDELETAIANLVQAGKVGAADLDFAINQRQAAALAQAQ 406
Query: 511 EALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+AL++++ +I + LPLDFWTIDLR A ALG+I+GE ++E VL IF +FCIGK
Sbjct: 407 QALIQVRETIAQGLPLDFWTIDLRSAIQALGEITGEGVTESVLDRIFSRFCIGK 460
>sp|Q2JIE6|MNME_SYNJB tRNA modification GTPase MnmE OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=mnmE PE=3 SV=1
Length = 459
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/458 (47%), Positives = 305/458 (66%), Gaps = 21/458 (4%)
Query: 107 GAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLDRHGNVVDEV 166
G+VGIVRLSG A+ IV +F P ++ + W SH + YG + D G ++DE
Sbjct: 23 GSVGIVRLSGSRALPIVQAIFTPARR-------NAVWE--SHRLLYGWIRDEKGQILDEA 73
Query: 167 LAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDL 226
LAV M APRSYTREDV EL CHG + ++ L+ CL GA LAQPGEF+LRAFLNGR+DL
Sbjct: 74 LAVWMQAPRSYTREDVAELHCHGGIMVVQATLQQCLRQGARLAQPGEFSLRAFLNGRIDL 133
Query: 227 SQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPPL 286
+QAE+V L++A+S AA ALAG+QG + ++R + + LL EIEARLDF++++PPL
Sbjct: 134 TQAESVADLVAARSPQAARMALAGLQGKLGGSIRALRQELLGLLAEIEARLDFEEDLPPL 193
Query: 287 NLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIV 346
++ ++ A+ ++ L TA +LL++G+++AIVGRPNVGKSSLLNAWS +RAIV
Sbjct: 194 DVAAWQARLQAIQTQIQALLATAERGQLLRTGVKVAIVGRPNVGKSSLLNAWSGQDRAIV 253
Query: 347 TEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTVS 406
T++ GTTRDV+E+ + V G+PV LLDTAGIR T+D VE++GVERS+ +A ADV+++ +
Sbjct: 254 TDLPGTTRDVVESHLVVKGIPVQLLDTAGIRATEDPVERLGVERSQRLAQAADVLVLVID 313
Query: 407 AVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDHVFTC 466
A GWT+ D+ + I+ P+ILVINK D AP E + V
Sbjct: 314 AQAGWTAADAAIYESIRHR--------PLILVINKTDLAPP---EGIPLPPEIAHRVPAV 362
Query: 467 AVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPL 526
A G+GI +LE A+ ++V + P ++NQRQ L + + +L ++ +I+ +LPL
Sbjct: 363 AAQGKGIPELEEALEQLVTQGR-PQPNLEISLNQRQAAALQQAQASLEQVGQAIQAQLPL 421
Query: 527 DFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
DFW+IDLR A ALGQI+GE+ISE VL IF +FCIGK
Sbjct: 422 DFWSIDLRGALHALGQITGEEISESVLDQIFSRFCIGK 459
>sp|P73839|MNME_SYNY3 tRNA modification GTPase MnmE OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=mnmE PE=3 SV=1
Length = 456
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/474 (46%), Positives = 316/474 (66%), Gaps = 26/474 (5%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
TIAAI T+I G++G+VRLSGP ++ I +F + G+ +W SH + YG
Sbjct: 6 TIAAIATAIVPQQGSIGVVRLSGPQSLTIAKTLFD--------APGNQTWE--SHRILYG 55
Query: 154 VVLDRHGNV---VDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
V RH +DE L + MLAPRSYT+EDVVE QCHG + +++VL+ CL+ GA LAQ
Sbjct: 56 HV--RHPQTKAAIDEALLLLMLAPRSYTKEDVVEFQCHGGIMPVQQVLQLCLQQGARLAQ 113
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEF+ RAFLNGRLDL+QAE++ +L+ A+S AA ALAG+QG + + +R C+++L
Sbjct: 114 PGEFSFRAFLNGRLDLTQAESISELVGAQSPQAAAIALAGLQGKLAQPIRDLRNTCLDIL 173
Query: 271 TEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVG 330
E+EAR+DF+D++PPL+ + + ++ + Q +E+ L TA +LL++GL++AIVG+PNVG
Sbjct: 174 AEVEARIDFEDDLPPLDEDSIRQQLQNLYQQLEDILNTAQRGELLRTGLKVAIVGQPNVG 233
Query: 331 KSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVER 390
KSSLLNAWS+++RAIVT++ GTTRDV+E+ + V G+P+ +LDTAGIRET D VE+IGVER
Sbjct: 234 KSSLLNAWSRTDRAIVTDLPGTTRDVVESQLVVEGIPIQVLDTAGIRETADQVEQIGVER 293
Query: 391 SEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASN 450
S A AD++++TV A GWT D + +++ P+ILVINKID +
Sbjct: 294 SRKAAQQADLVLLTVDAHQGWTEADQLIYEQVKDR--------PLILVINKIDLGRADLV 345
Query: 451 EWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTK 510
+ + V T A GI+ LE AI++ V + +A+NQRQ L +
Sbjct: 346 SYPP---EITNTVLTAAAANLGIEALENAIIEQVNQTNLSPQNLDFAINQRQEAVLTEAQ 402
Query: 511 EALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
AL +L+ ++ E+LPLDFWTIDLR A ALGQ++GE ++E VL IF +FCIGK
Sbjct: 403 LALKQLQQTMAEQLPLDFWTIDLRLAINALGQVTGETVTESVLDRIFSRFCIGK 456
>sp|Q2JSU8|MNME_SYNJA tRNA modification GTPase MnmE OS=Synechococcus sp. (strain
JA-3-3Ab) GN=mnmE PE=3 SV=1
Length = 459
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/458 (47%), Positives = 303/458 (66%), Gaps = 21/458 (4%)
Query: 107 GAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLDRHGNVVDEV 166
G++GIVRLSG A+ I +F P ++ + W SH + YG + D G +DE
Sbjct: 23 GSIGIVRLSGSRALAIAQAIFTPARR-------NAVWE--SHRLLYGWIHDEKGRRLDEA 73
Query: 167 LAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDL 226
LAV M APRSYTREDVVEL CHG + ++ L+ CL GA LAQPGEF+LRAFLNGR+DL
Sbjct: 74 LAVWMQAPRSYTREDVVELHCHGGIMVVQATLQQCLRQGARLAQPGEFSLRAFLNGRIDL 133
Query: 227 SQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPPL 286
+QAE+V L++A+S AA ALAG+QG + ++R + + LL EIEARLDF++++PPL
Sbjct: 134 TQAESVADLVAARSPQAAQMALAGLQGKLGQSIRALRQELLGLLAEIEARLDFEEDLPPL 193
Query: 287 NLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIV 346
++ ++ + ++ L TA +LL++G+++AIVGRPNVGKSSLLNAWS +RAIV
Sbjct: 194 DVPAWQARLQDIQAQMQALLATAERGQLLRTGVKVAIVGRPNVGKSSLLNAWSGQDRAIV 253
Query: 347 TEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTVS 406
T++ GTTRDV+E+ + V G+PV LLDTAGIR TDD VE++GVERS+ +A ADV+++ +
Sbjct: 254 TDLPGTTRDVVESQLVVRGIPVQLLDTAGIRATDDPVERLGVERSQRLAQTADVLVLVID 313
Query: 407 AVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDHVFTC 466
A GWT D+ + I+ P+ILVINK D AP+ ++ V
Sbjct: 314 AQAGWTEADAAIYASIRHR--------PLILVINKTDLAPADK---IRLPPEIAYRVPAV 362
Query: 467 AVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPL 526
A GQGI +LE A+ ++V + P ++NQRQ L + + +L ++ +++ +LPL
Sbjct: 363 AAQGQGIPELEEALEQLVTQGR-PQPNLEVSLNQRQAAALRQAQASLEQVVQAMQAQLPL 421
Query: 527 DFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
DFWTIDLR A ALGQI+GE+ISE VL IF +FCIGK
Sbjct: 422 DFWTIDLRGALHALGQITGEEISEAVLDQIFSRFCIGK 459
>sp|A5GW82|MNME_SYNR3 tRNA modification GTPase MnmE OS=Synechococcus sp. (strain RCC307)
GN=mnmE PE=3 SV=1
Length = 453
Score = 348 bits (894), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 198/455 (43%), Positives = 284/455 (62%), Gaps = 28/455 (6%)
Query: 111 IVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLD-RHGNVVDEVLAV 169
IVR+SGP A I ++F+P K+ SW SH V YG V D +G+VVDEVL +
Sbjct: 26 IVRISGPQAEAIGRQLFQPAGKQ--------SWE--SHRVLYGHVNDPANGDVVDEVLLL 75
Query: 170 PMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQA 229
M APRS+TRE VVE HG V ++R+L L AGA A PGEF+ RAFLNGRLDL++A
Sbjct: 76 LMRAPRSFTRETVVEFHGHGGLVAVQRLLELVLAAGARRALPGEFSQRAFLNGRLDLTRA 135
Query: 230 ENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPPLNLN 289
E + +L+SA+S AA+ A+AG+ GG + ++R + ++ L E+EAR+DF++++P L+
Sbjct: 136 EAISELVSARSRRAAELAMAGLDGGLQQRIEALRDQLLDQLCELEARVDFEEDLPSLDGA 195
Query: 290 LVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEI 349
V + + Q ++ + +LL+ GL++AI+GRPNVGKSSLLNA S ERAIVT++
Sbjct: 196 AVCTALRDVQQALDQLVLDGQQAQLLRDGLRVAIIGRPNVGKSSLLNALSGHERAIVTDL 255
Query: 350 AGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTVSAVD 409
GTTRD+++ + + GVP+TLLDTAGIR T D VE++G+ERS A AD +++
Sbjct: 256 PGTTRDLLDYDLVLQGVPITLLDTAGIRSTADRVEQLGIERSRAAFASADAVVLLYDLSR 315
Query: 410 GWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDHVFTCAVT 469
GW+ +DS L N + TP+++V NK D A + + A +
Sbjct: 316 GWSPDDSALRNEV-------PDGTPLLVVGNKSDLAAEPAT---------TQGLAISARS 359
Query: 470 GQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFW 529
G G+ +L +A++K+ GL G A+NQRQC+ AL R + + + LP DFW
Sbjct: 360 GLGLAELSSALLKLCGLSG-EGQGLLLALNQRQCDLAAAASAALGRSQQAARDGLPWDFW 418
Query: 530 TIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
TIDLR+A ALG+I+G +I+E VL +F +FCIGK
Sbjct: 419 TIDLREAIRALGEITGAEITEAVLDRVFSRFCIGK 453
>sp|A2C018|MNME_PROM1 tRNA modification GTPase MnmE OS=Prochlorococcus marinus (strain
NATL1A) GN=mnmE PE=3 SV=1
Length = 464
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/479 (40%), Positives = 293/479 (61%), Gaps = 26/479 (5%)
Query: 91 TFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVV 150
T TIAAI T++ G++ +R+SG A++ K G W ++H V
Sbjct: 7 TEDTIAAIATAVSPGQGSIAAIRISGSSAIE--------TSKNIVDVPGIQDW--STHKV 56
Query: 151 EYGVVLDRH-GNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLE-AGATL 208
YG V + + +DEVL + M PRS+T EDVVE+ CHG + ++++L L
Sbjct: 57 LYGHVTEENRKKYIDEVLILVMKGPRSFTGEDVVEIHCHGGIIPVQKILERILAFPSVRR 116
Query: 209 AQPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIE 268
A+PGEF+ RA LNGRL L+QAE++ +L+SA+S AA+ A+ GI+G + + S+R + IE
Sbjct: 117 AEPGEFSQRAVLNGRLSLTQAESISELVSARSRKAAELAINGIEGNIQTTIQSIRKRLIE 176
Query: 269 LLTEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
LTEIEAR+DF++++P L+ V ++I A+ +D+ ++ A ++SGL++A+ G+PN
Sbjct: 177 QLTEIEARIDFEEDLPLLDEKHVKNEIVAIKKDLNELIDNAKRGSWVRSGLKVALAGKPN 236
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSL+N SK E+AIVT++ GTTRD++E+ + + G+PVT +DTAG+R+T DI+EKIG+
Sbjct: 237 VGKSSLMNRLSKQEKAIVTDLPGTTRDILESEIVLEGIPVTFIDTAGLRDTKDIIEKIGI 296
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
R++ + AD+II+ GWT+ED +L ++ N P+++V NK D
Sbjct: 297 SRTKKTLIHADLIILIFDYSSGWTNEDESILKQLPVN-------IPLLIVGNKSDLMNDQ 349
Query: 449 SNEWNKVGNSF---NDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQ 505
S E KV + V A TG G DL ++K G Q G A+N+RQ +
Sbjct: 350 SFE--KVPKYILKKENLVILSAKTGNGEDDLINYLLKKCGSSQ--THGLDIALNERQLDL 405
Query: 506 LMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
T E+L + +E+LP DFWTIDLR A LG+++GED++E +L NIF KFCIGK
Sbjct: 406 AKSTTESLENINKVFDEKLPWDFWTIDLRQAINYLGELTGEDLTENLLDNIFSKFCIGK 464
>sp|Q3AGU7|MNME_SYNSC tRNA modification GTPase MnmE OS=Synechococcus sp. (strain CC9605)
GN=mnmE PE=3 SV=1
Length = 450
Score = 345 bits (884), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 200/461 (43%), Positives = 287/461 (62%), Gaps = 32/461 (6%)
Query: 107 GAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLDRHGNVVDEV 166
G + ++RLSGP A + + G W SH V YG V+D G +DEV
Sbjct: 19 GGIAVIRLSGPAA--------EATGRSVVHCPGRQEW--GSHRVVYGHVIDSEGRRLDEV 68
Query: 167 LAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACL-EAGATLAQPGEFTLRAFLNGRLD 225
L + M PRS+T EDVVE+ CHG + ++RVL L + G AQPGEF+ RA LNGRLD
Sbjct: 69 LLLLMRGPRSFTGEDVVEIHCHGGVIAVQRVLEKVLRQPGVRRAQPGEFSQRAVLNGRLD 128
Query: 226 LSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPP 285
L++AE V +L++A+S AA+ A+AG+ GG + +T +R + ++ LTE+EAR+DF++++PP
Sbjct: 129 LTRAEAVSELVAARSRRAAELAMAGLDGGIQAEITVLRERLLDQLTELEARVDFEEDLPP 188
Query: 286 LNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAI 345
L+ ++ ++ A+ +++ + L+ GL++A+VGRPNVGKSSLLN S+ ERAI
Sbjct: 189 LDGEALLQQLQAVRLELQQLVRDGERGDALRQGLRVALVGRPNVGKSSLLNRLSRRERAI 248
Query: 346 VTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTV 405
VT++ GTTRD++E+ + + GVP+TLLDTAGIR TDD VE++G+ RSE ADV+++ +
Sbjct: 249 VTDLPGTTRDLLESEIVLEGVPITLLDTAGIRSTDDAVEQLGIARSEQALATADVVLLVL 308
Query: 406 SAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDHVFT 465
GWT+ED+ LL RI + P ILV NK D A + V S
Sbjct: 309 DGHAGWTAEDAALLARIPAQ-------IPRILVANKADLPAGAFPQPVDVQLS------- 354
Query: 466 CAVTGQGIQDLETAIMKIVGLHQIPAG--GRRWAVNQRQCEQLMRTKEALVRLKSSIEEE 523
A+ G G DL A+++ G AG G A+NQRQ + R EAL R + ++
Sbjct: 355 -ALEGMGEADLVQALLERCG----AAGTDGMLVALNQRQRDLAARAAEALARSQEVAAQQ 409
Query: 524 LPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
LP DFWTIDLR+A ALG+I+GE+++E VL +F +FCIGK
Sbjct: 410 LPWDFWTIDLREAIRALGEITGEELTEAVLDRVFSRFCIGK 450
>sp|Q46HI4|MNME_PROMT tRNA modification GTPase MnmE OS=Prochlorococcus marinus (strain
NATL2A) GN=mnmE PE=3 SV=1
Length = 464
Score = 344 bits (883), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 194/479 (40%), Positives = 293/479 (61%), Gaps = 26/479 (5%)
Query: 91 TFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVV 150
T TIAAI T++ G++ +R+SG A++ K G W ++H V
Sbjct: 7 TEDTIAAIATAVSPGQGSIAAIRISGSSAIE--------TSKNIVDVPGIQDW--STHKV 56
Query: 151 EYGVVLDRH-GNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLE-AGATL 208
YG V + + +DEVL + M PRS+T EDVVE+ CHG + ++++L L
Sbjct: 57 LYGHVTEENRKKYIDEVLILVMKGPRSFTGEDVVEIHCHGGIIPVQKILERILAFPSVRR 116
Query: 209 AQPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIE 268
A+PGEF+ RA LNGRL L+QAE++ +L+SA+S AA+ A+ GI+G + + S+R + IE
Sbjct: 117 AEPGEFSQRAVLNGRLSLTQAESISELVSARSRKAAELAINGIEGNIQTTIQSIRKRLIE 176
Query: 269 LLTEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
LTEIEAR+DF++++P L+ V ++I A+ +D+ ++ A ++SGL++A+ G+PN
Sbjct: 177 QLTEIEARIDFEEDLPLLDEKHVKNEIVAIKKDLNELIDNAKRGSWVRSGLKVALTGKPN 236
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSL+N SK E+AIVT++ GTTRD++E+ + + G+PVT +DTAG+R+T DI+EKIG+
Sbjct: 237 VGKSSLMNRLSKQEKAIVTDLPGTTRDILESEIILEGIPVTFIDTAGLRDTKDIIEKIGI 296
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
R++ + AD+II+ GWT+ED +L ++ N P+++V NK D
Sbjct: 297 SRTKKTLIHADLIILIFDYSSGWTNEDESILKQLPIN-------IPLLIVGNKSDLTNDQ 349
Query: 449 SNEWNKVGNSF---NDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQ 505
S E KV + V A TG G DL ++K G Q G A+N+RQ +
Sbjct: 350 SFE--KVPKYILKKENLVIISAKTGNGEDDLINYLLKKCGSSQ--THGLDIALNERQLDL 405
Query: 506 LMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
T ++L + +E+LP DFWTIDLR A LG+++GED++E +L NIF KFCIGK
Sbjct: 406 AKSTMKSLENINKVFDEKLPWDFWTIDLRQAINYLGELTGEDLTESLLDNIFSKFCIGK 464
>sp|Q7U3V6|MNME_SYNPX tRNA modification GTPase MnmE OS=Synechococcus sp. (strain WH8102)
GN=mnmE PE=3 SV=1
Length = 450
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 201/461 (43%), Positives = 288/461 (62%), Gaps = 32/461 (6%)
Query: 107 GAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLDRHGNVVDEV 166
G + +VR+SGP A + GR V ++ GS H V YG V+D G +DEV
Sbjct: 19 GGIAVVRVSGP-AAEATGRSV--VHCPGRQVCGS-------HRVMYGHVIDGEGRRLDEV 68
Query: 167 LAVPMLAPRSYTREDVVELQCHGSEVCLRRVL-RACLEAGATLAQPGEFTLRAFLNGRLD 225
L + M PRS+T EDVVE+ CHG V +++VL R G A PGEF+ RA LNGRLD
Sbjct: 69 LLLLMRGPRSFTGEDVVEIHCHGGVVAVQQVLERVLAHPGVRRALPGEFSQRAVLNGRLD 128
Query: 226 LSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPP 285
L++AE V +L++A+S AA+ A+AG+ GG + +T++R + ++ LTE+EAR+DF++++PP
Sbjct: 129 LTRAEAVSELVAARSRRAAELAMAGLDGGIQAKITALRERLLDQLTELEARVDFEEDLPP 188
Query: 286 LNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAI 345
L+ + ++D + + Q + + L+SGL++A+VGRPNVGKSSLLN S+ ERAI
Sbjct: 189 LDGDALLDGLQQVRQALLTLVADGERADALRSGLRVALVGRPNVGKSSLLNRLSRRERAI 248
Query: 346 VTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTV 405
VTE+ GTTRD++E+ + + GVP+TLLDTAGIR TDD VE++G+ RSE ADV+++ +
Sbjct: 249 VTELPGTTRDLLESEIVLEGVPITLLDTAGIRSTDDAVEQLGIARSEEALATADVVLLVL 308
Query: 406 SAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDHVFT 465
GWT+ED+ LL RI + P ILV NK D A + V S
Sbjct: 309 DGHAGWTAEDAALLARIPEH-------IPRILVANKADLPAGALPQPVDVQLS------- 354
Query: 466 CAVTGQGIQDLETAIMKIVGLHQIPAG--GRRWAVNQRQCEQLMRTKEALVRLKSSIEEE 523
A+ G G +DL A+++ G AG G A+N+RQ + AL R + ++
Sbjct: 355 -ALEGTGEEDLVQALLERCG----AAGTEGVLLALNERQRDLAATAAAALGRSQEVAAQQ 409
Query: 524 LPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
LP DFWTIDLR+A ALG+I+GE+++E VL +F +FCIGK
Sbjct: 410 LPWDFWTIDLREAIRALGEITGEELTEAVLDRVFSRFCIGK 450
>sp|Q7V491|MNME_PROMM tRNA modification GTPase MnmE OS=Prochlorococcus marinus (strain
MIT 9313) GN=mnmE PE=3 SV=1
Length = 470
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 202/466 (43%), Positives = 292/466 (62%), Gaps = 27/466 (5%)
Query: 107 GAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLDRHGN-VVDE 165
G + +VRLSGP A ++VGR + G W SH V YG V+D G +DE
Sbjct: 24 GGIAVVRLSGP-AAEVVGRSVVSI-------PGQQLW--VSHRVLYGHVMDESGKERIDE 73
Query: 166 VLAVPMLAPRSYTREDVVELQCHGSEVCLRRVL-RACLEAGATLAQPGEFTLRAFLNGRL 224
VL + M PRS+T EDVVE+ CHG + ++RVL R + A PGEF+ RA LNGRL
Sbjct: 74 VLVLLMKGPRSFTGEDVVEIHCHGGLMAVQRVLERVLAQPHVRRALPGEFSQRAVLNGRL 133
Query: 225 DLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMP 284
DL+QAE + +L++A+S AA A+ G+ GG +TS+R + ++ L+E+EAR+DF++++P
Sbjct: 134 DLTQAEAISELVAARSRRAAQLAMTGVDGGIQRRITSLRERLLDQLSELEARVDFEEDLP 193
Query: 285 PLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERA 344
PL+ ++ ++ + +++E +E A +L+ GLQ+A+VGRPNVGKSSLLN S+ ERA
Sbjct: 194 PLDGAELLLELQCVRRELEQLVEDAKRGDVLRQGLQVALVGRPNVGKSSLLNRLSRRERA 253
Query: 345 IVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMT 404
IVT++ GTTRDV+E+ + + GVP+TL+DTAGIR T D +E++G++RS ADV ++
Sbjct: 254 IVTDLPGTTRDVLESEIVLEGVPITLVDTAGIRATQDALEQLGIDRSHQALAAADVAVLV 313
Query: 405 VSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAP---SASNEWNKVGNSFND 461
GWT++D+ LL +I + P +LV NK D P +AS +GN +
Sbjct: 314 FDLSLGWTADDAALLAQIPDD-------LPRLLVGNKADLQPASMAASLMVASLGNEVDG 366
Query: 462 H---VFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKS 518
V A+TGQG + L A++K G + A G A+NQRQ + AL R +
Sbjct: 367 KTVDVMLSALTGQGEEALIKAVLKTCGASE--AQGLVVALNQRQQDLAAAAAIALARTQE 424
Query: 519 SIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ E +LP DFWTIDLR A +LG+I+GE+I+E VL IF +FCIGK
Sbjct: 425 AAEHQLPWDFWTIDLRQAISSLGEITGEEITEAVLDRIFSRFCIGK 470
>sp|Q7VE01|MNME_PROMA tRNA modification GTPase MnmE OS=Prochlorococcus marinus (strain
SARG / CCMP1375 / SS120) GN=mnmE PE=3 SV=1
Length = 455
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/478 (39%), Positives = 292/478 (61%), Gaps = 32/478 (6%)
Query: 92 FST---IAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSH 148
FST IAAI +++ GA+ IV++SG A ++V V + K W +SH
Sbjct: 5 FSTEENIAAIASAVAPGQGAIAIVKVSGASAKEVVKNVVRTPSNK--------IW--SSH 54
Query: 149 VVEYGVVLDRHGNV-VDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGAT 207
+ YG V+D+ +DEVL + M PRS+T EDVVE+ CHG + +++VL A L+ T
Sbjct: 55 KILYGHVIDKSTKKNIDEVLILIMDGPRSFTGEDVVEIHCHGGLIVVQQVLDAILKQPKT 114
Query: 208 L-AQPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKC 266
A PGEF+ RA LNGRLD++QAE + LI A+S AA A+AGI G ++ + +R K
Sbjct: 115 RRAFPGEFSQRAVLNGRLDITQAEAINDLIHARSQKAAQLAIAGIDGDITNKINYLREKL 174
Query: 267 IELLTEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGR 326
++ L+EIEAR+DF++++P LN ++ + + +++ + A L+++GL++A+VG
Sbjct: 175 LDQLSEIEARIDFEEDLPKLNSKKLLTDLMLIRAELKQLINDAKQGSLIRNGLKVALVGL 234
Query: 327 PNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKI 386
PNVGKSS+LN SK ERAIVT++ GTTRD++E+ + + GVP+TL+DTAGIRET++ +EKI
Sbjct: 235 PNVGKSSILNLLSKHERAIVTDLPGTTRDLLESEIILEGVPITLIDTAGIRETNNEIEKI 294
Query: 387 GVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAP 446
GV S+ AD++++ GW D LL +I TP +++ NK D
Sbjct: 295 GVSLSQKTLFTADIVVLIFDLSKGWNKNDQNLLEKI-------PKGTPTLIIGNKADLKS 347
Query: 447 SASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQL 506
++N H A+TG+G ++L ++K+ G +++ G A+NQRQ + +
Sbjct: 348 QSTN--------IQPHATMTAITGEGEKELIQELLKLAGANELE--GIEVALNQRQLDLV 397
Query: 507 MRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
AL +++ E L DFWTIDLR+A LG+++GE+++E +L IF +FCIGK
Sbjct: 398 KVAVNALDQIEKVAAESLAWDFWTIDLREAIYKLGELTGEEVTEALLDRIFSRFCIGK 455
>sp|A2CDC4|MNME_PROM3 tRNA modification GTPase MnmE OS=Prochlorococcus marinus (strain
MIT 9303) GN=mnmE PE=3 SV=1
Length = 465
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 202/465 (43%), Positives = 293/465 (63%), Gaps = 30/465 (6%)
Query: 107 GAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLDRHGN-VVDE 165
G + +VRLSGP A ++VGR + G W SH V YG V+D G +DE
Sbjct: 24 GGIAVVRLSGP-AAEVVGRSVVSI-------PGQQLW--VSHRVLYGHVMDESGKERIDE 73
Query: 166 VLAVPMLAPRSYTREDVVELQCHGSEVCLRRVL-RACLEAGATLAQPGEFTLRAFLNGRL 224
VL + M PRS+T EDVVE+ CHG + ++RVL R + A PGEF+ RA LNGRL
Sbjct: 74 VLVLLMKGPRSFTGEDVVEIHCHGGLMAVQRVLERVLAQPHVRRALPGEFSQRAVLNGRL 133
Query: 225 DLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMP 284
DL+QAE + +L++A+S AA A+ G+ GG +TS+R + ++ L+E+EAR+DF++++P
Sbjct: 134 DLTQAEAISELVAARSRRAAQLAMTGVDGGIQRRITSLRERLLDQLSELEARVDFEEDLP 193
Query: 285 PLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERA 344
PL+ ++ ++ + +++E +E A +L+ GLQ+A+VGRPNVGKSSLLN S+ ERA
Sbjct: 194 PLDAAELLLELQCVRRELEQLVEDAKRGDVLRQGLQVALVGRPNVGKSSLLNRLSRRERA 253
Query: 345 IVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMT 404
IVT++ GTTRDV+E+ + + GVP+TL+DTAGIR T D +E++G++RS ADV ++
Sbjct: 254 IVTDLPGTTRDVLESEIVLEGVPITLVDTAGIRATKDALEQLGIDRSHQALAAADVAVLV 313
Query: 405 VSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAP-----SASNEWNKVGNSF 459
GWT++D+ LL +I + P +LV NK D P S SNE + G +
Sbjct: 314 FDLSLGWTADDAALLAQIPDD-------LPRLLVGNKADLQPASMTASLSNEVD--GKTV 364
Query: 460 NDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSS 519
+ V A+TGQG + L A++K G + A G A+NQRQ + AL R + +
Sbjct: 365 D--VMLSALTGQGEEALIEAVLKTCGASE--AQGLVVALNQRQQDLAATAAIALARTQEA 420
Query: 520 IEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
++LP DFWTIDLR A +LG+I+GE+I+E VL IF +FCIGK
Sbjct: 421 AAQKLPWDFWTIDLRQAISSLGEITGEEITEAVLDRIFSRFCIGK 465
>sp|P25811|MNME_BACSU tRNA modification GTPase MnmE OS=Bacillus subtilis (strain 168)
GN=mnmE PE=3 SV=1
Length = 459
Score = 335 bits (859), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 193/476 (40%), Positives = 285/476 (59%), Gaps = 20/476 (4%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
TIAAI T +G GA+ IVRLSGP A+ I +++K K K S SH +
Sbjct: 1 MDTIAAISTPMG--EGAIAIVRLSGPEAIQIADKIYKGPKGKTLSSV-------ESHTIH 51
Query: 152 YGVVLDRHGN-VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++DR + VV+EV+ + APR++TREDV+E+ CHG V + +VL+ L GA LA+
Sbjct: 52 YGHIVDRPSDRVVEEVMVSVLKAPRTFTREDVIEINCHGGIVTVNQVLQLALREGARLAE 111
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + A+ ++G S+LV +R++ +E L
Sbjct: 112 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAMNQMEGRLSALVRRLRSEILETL 171
Query: 271 TEIEARLDFD--DEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+E +D+ D++ + ++++K A+ +++E L T+ K+L+ GL I+GRPN
Sbjct: 172 AHVEVNIDYPEYDDVEEMTHQILVEKATAVKKEIETLLRTSEQGKILREGLSTVIIGRPN 231
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ +AIVT+I GTTRDVIE V V GVP+ L+DTAGIRET+DIVE+IGV
Sbjct: 232 VGKSSLLNSLVHEAKAIVTDIPGTTRDVIEEYVNVRGVPLRLVDTAGIRETEDIVERIGV 291
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS V AD+I++ ++ + + ED +L ++ +I+++NK D P
Sbjct: 292 ERSRQVLKEADLILLVLNYSEELSEEDVKLFEAVE--------GMDVIVILNKTDLEPKI 343
Query: 449 SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMR 508
E + + V T + +GI DLE AI + I +G + N R L +
Sbjct: 344 DTERVRELANGRPVVTTSLLKEEGINDLEEAIQSLFYTGAIESGDLTYVSNTRHITILQQ 403
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
K A+ S IE+++P+D IDL LG+I G+ + E ++ +F +FC+GK
Sbjct: 404 AKRAIEDALSGIEQDVPIDMVQIDLTRCWELLGEIIGDSVHESLIDQLFSQFCLGK 459
>sp|A4ITX1|MNME_GEOTN tRNA modification GTPase MnmE OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=mnmE PE=3 SV=1
Length = 462
Score = 332 bits (850), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 202/479 (42%), Positives = 281/479 (58%), Gaps = 26/479 (5%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T +G GA+ IVRLSG AV+I R+F+ K+ K SH +
Sbjct: 4 FDTIAAISTPMG--EGAIAIVRLSGDEAVEIADRLFRSPTGKQLKDV-------PSHTIH 54
Query: 152 YGVVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D + G +V+EV+ M AP+++TREDVVE+ CHG V + RVL+ L GA LA+
Sbjct: 55 YGHIVDPKSGRIVEEVMVSVMRAPKTFTREDVVEINCHGGFVSVNRVLQLVLANGARLAE 114
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + AL ++G S L+ +R +E L
Sbjct: 115 PGEFTKRAFLNGRIDLSQAEAVIDLIRAKTDRAMNVALQQMEGRLSKLIRELRQTILETL 174
Query: 271 TEIEARLDF---DD--EMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVG 325
+E +D+ DD EM P L+ +K + +E L TA K+L+ GL I+G
Sbjct: 175 AHVEVNIDYPEYDDVEEMTP---RLLKEKAEYVRGQIEKLLSTATQGKILREGLATVIIG 231
Query: 326 RPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEK 385
RPNVGKSSLLNA + RAIVT+I GTTRDVIE V V GVP+ L+DTAGIRET+DIVE+
Sbjct: 232 RPNVGKSSLLNALAHENRAIVTDIPGTTRDVIEEYVNVRGVPLRLIDTAGIRETEDIVER 291
Query: 386 IGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCA 445
IGVERS + AD+I++ ++ + T ED L + +I+++NK D
Sbjct: 292 IGVERSRQMLKKADLILLVLNYHEPLTEEDERLF--------AMTEGMDVIVIVNKTDLP 343
Query: 446 PSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQ 505
+ E K + V T + +GI +LE AI + ++ AG + N R
Sbjct: 344 QNIDIERVKELAAGRPIVATSLLCERGIDELEKAIADLFFGGELEAGDLTYVSNSRHIAL 403
Query: 506 LMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
L + K+A+ S I+ +P+D IDLR A LG+I G+ + E ++ +F +FC+GK
Sbjct: 404 LEQAKKAIEDALSGIDVGMPVDLVQIDLRRAWELLGEIVGDTVHESLIDQLFAQFCLGK 462
>sp|A8FJG0|MNME_BACP2 tRNA modification GTPase MnmE OS=Bacillus pumilus (strain SAFR-032)
GN=mnmE PE=3 SV=1
Length = 459
Score = 330 bits (847), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/478 (40%), Positives = 286/478 (59%), Gaps = 24/478 (5%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
TIAAI T +G GA+ I+RLSGP AV I R++K K+KK S S H +
Sbjct: 1 MDTIAAISTPMG--EGAIAIIRLSGPEAVQIADRMYKGPKEKKLVSVDS-------HTIH 51
Query: 152 YGVVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D R V++EV+ + AP+++TREDV+E+ CHG V + +VL+ L GA LA+
Sbjct: 52 YGHIVDARTDQVIEEVMVSVLRAPKTFTREDVIEINCHGGIVTVNKVLQLALREGARLAE 111
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + A+ ++G S LV +R + +E L
Sbjct: 112 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAITQMEGRLSGLVQRLRGEILETL 171
Query: 271 TEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
IE +D+ D++ + ++++K ++ +++E+ L T++ K+L+ GL I+GRPN
Sbjct: 172 AHIEVNIDYPEYDDVEEMTHRVLVEKATSVKKEIESLLSTSHQGKILREGLSTVIIGRPN 231
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ + +AIVT+I GTTRDVIE V V GVP+ L+DTAGIRET+DIVE+IGV
Sbjct: 232 VGKSSLLNSLVQETKAIVTDIPGTTRDVIEEYVNVRGVPLRLVDTAGIRETEDIVERIGV 291
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS V AD+I++ ++ + + ED +L + S +I+++NK D P
Sbjct: 292 ERSRQVLKEADLILLVLNYSEELSEEDIKLFEAV--------SGMDIIVIVNKTDLEPKL 343
Query: 449 SNEWNKVGNSFNDH--VFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQL 506
E KV D V T + +GI +LE AI + I +G + N R L
Sbjct: 344 DVE--KVKQLAKDRPVVTTSLLQEKGIDELEMAIQSLFFTGSIESGDLTYVSNTRHIALL 401
Query: 507 MRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
K+++ IE ++P+D IDL LG+I G+ + E ++ +F +FC+GK
Sbjct: 402 QAAKQSIEDALEGIEMDVPIDIVQIDLTRCWEQLGEIIGDAVHESLIDQLFSQFCLGK 459
>sp|Q0I6N5|MNME_SYNS3 tRNA modification GTPase MnmE OS=Synechococcus sp. (strain CC9311)
GN=mnmE PE=3 SV=1
Length = 463
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/474 (41%), Positives = 281/474 (59%), Gaps = 24/474 (5%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
+IAAI T++ G + ++RLSGP AV V + G W SH V YG
Sbjct: 11 SIAAIATAVAPGQGGIAVIRLSGPSAVRAVAAI--------TVIPGQQVWE--SHRVLYG 60
Query: 154 VVLDRHG-NVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA-GATLAQP 211
V+ G +DEVL + MLAPRS+T EDVVE+ CHG + +++VL LE G A P
Sbjct: 61 HVVAAGGVERLDEVLVLVMLAPRSFTGEDVVEIHCHGGVIAVQQVLARVLEQPGVRRALP 120
Query: 212 GEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLT 271
GEF+ RA LNGRLDL++AE + L+ A+S AA A+AG+ GG + +R + ++ L+
Sbjct: 121 GEFSQRAVLNGRLDLTRAEAIGDLVGARSQRAAQLAMAGLDGGIQKKMVVLRERLLDQLS 180
Query: 272 EIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGK 331
E+EAR+DF++++PPLN ++ ++ A+ ++ + +++ GL++A+VGRPNVGK
Sbjct: 181 ELEARVDFEEDLPPLNGEALLQELQAVRLELLTLVADGERGSVVRHGLRVALVGRPNVGK 240
Query: 332 SSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERS 391
SSLLN S+ ERAIVT++ GTTRD++E+ + + GVP+TLLDTAGIR T + VEK+G+ RS
Sbjct: 241 SSLLNLLSRRERAIVTDLPGTTRDLLESEIVLDGVPITLLDTAGIRATSNAVEKLGIARS 300
Query: 392 EAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNE 451
AD++++ GW+ +D L I P + V NK D A
Sbjct: 301 RDALASADLVLLLFDLAQGWSDDDQALFALIPEG-------VPCLRVGNKADLPLKAEPV 353
Query: 452 WNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVG-LHQIPAGGRRWAVNQRQCEQLMRTK 510
V S D V AVTG G Q L A+++ G L + P A+NQRQ + +
Sbjct: 354 AETVAASVAD-VRLSAVTGDGEQALVQAVLERCGALGEQPL---LLALNQRQSDLAVTAA 409
Query: 511 EALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
EAL R + + LP DFWTIDLR A +LG+I+GE ++E VL IF +FCIGK
Sbjct: 410 EALARSEQVAADGLPWDFWTIDLRQAIRSLGEITGEQLTESVLDRIFSRFCIGK 463
>sp|Q3AVY3|MNME_SYNS9 tRNA modification GTPase MnmE OS=Synechococcus sp. (strain CC9902)
GN=mnmE PE=3 SV=1
Length = 451
Score = 329 bits (844), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 194/464 (41%), Positives = 287/464 (61%), Gaps = 37/464 (7%)
Query: 107 GAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLDRHGNV-VDE 165
G + ++RLSGP+A + V + + G W SH + YG V+ G +DE
Sbjct: 19 GGIAVIRLSGPVA--------EQVAQAVVQCPGHQEW--GSHRILYGHVMAVDGQRRLDE 68
Query: 166 VLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLE-AGATLAQPGEFTLRAFLNGRL 224
VL + M APRS+T EDVVE+ CHG + +++VL LE G A PGEF+ RA LNGRL
Sbjct: 69 VLLLLMRAPRSFTGEDVVEIHCHGGVMAVQQVLERVLEHPGVRRALPGEFSQRAVLNGRL 128
Query: 225 DLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMP 284
DL+QAE V +L+SA+S AAD A+AG+ GG + +T +R + ++ LTE+EAR+DF+D++P
Sbjct: 129 DLTQAEAVSELVSARSRRAADLAMAGLDGGIQARITVLRERLLDQLTELEARVDFEDDLP 188
Query: 285 PLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERA 344
PL+ +++++ A+ ++ + L+ GL++A+VGRPNVGKSSLLN S+ ERA
Sbjct: 189 PLDGTALLNELQAVRVELLALVADGERGDALRHGLRVALVGRPNVGKSSLLNRLSRRERA 248
Query: 345 IVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMT 404
IVTE+ GTTRD++E+ + + GVP+TL+DTAGIR T+D VE++G+ RSE + ADV+++
Sbjct: 249 IVTELPGTTRDLLESEIVLDGVPITLMDTAGIRATNDAVEQLGIARSEEALISADVVVLI 308
Query: 405 VSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDC-APSASNEWNKVGNSFNDHV 463
V GWT D++LL RI ++ P ++V NK D P D
Sbjct: 309 VDGHAGWTETDAQLLARIPND-------VPRVVVANKSDLDGPPLPG--------LVDVQ 353
Query: 464 FTCAVTGQGIQDLETAIMKIVGLHQIPAG---GRRWAVNQRQCEQLMRTKEALVRLKSSI 520
F+ A+ G G E A ++++ L + AG G ++N RQ + AL R
Sbjct: 354 FS-ALNGAG----EDAFVQVL-LERCGAGDAAGIVLSLNTRQRDLASVAAAALERSHEVA 407
Query: 521 EEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+++LP DFWTIDLR+A LG+I+GE+++E VL +F +FCIGK
Sbjct: 408 QQQLPWDFWTIDLREAIRGLGEITGEELTEAVLERVFSRFCIGK 451
>sp|A7ZAW1|MNME_BACA2 tRNA modification GTPase MnmE OS=Bacillus amyloliquefaciens (strain
FZB42) GN=mnmE PE=3 SV=1
Length = 459
Score = 328 bits (841), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 192/476 (40%), Positives = 282/476 (59%), Gaps = 20/476 (4%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
TIAAI T +G GA+ IVRLSGP AV I +++K K K S+ SH +
Sbjct: 1 MDTIAAISTPMG--EGAIAIVRLSGPEAVKIADKMYKGPKGKTLSSA-------ESHTIH 51
Query: 152 YGVVLDRH-GNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG + D G +++EV+ + APR++TREDV+E+ CHG V + +VL+ L GA LA+
Sbjct: 52 YGHIADSTTGRIIEEVMVSVLRAPRTFTREDVIEINCHGGIVTVNQVLQLALREGARLAE 111
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + A+ ++G S+LV +R + +E L
Sbjct: 112 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAMNQMEGRLSALVRRLRDELLETL 171
Query: 271 TEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+E +D+ D++ + L+++K + +++E L T+ K+L+ GL I+GRPN
Sbjct: 172 AHVEVNIDYPEYDDVEEMTHQLLVEKASGVKKEIEALLRTSEQGKILREGLSTVIIGRPN 231
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ +AIVT+I GTTRDVIE V V GVP+ L+DTAGIRET+DIVE+IGV
Sbjct: 232 VGKSSLLNSLVHETKAIVTDIPGTTRDVIEEYVNVRGVPLRLVDTAGIRETEDIVERIGV 291
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS V AD+I++ ++ + + ED +L ++ +I+++NK D
Sbjct: 292 ERSRQVLKEADLILLVLNHSEELSEEDVKLFEAVE--------GMDVIVIMNKTDLEAKI 343
Query: 449 SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMR 508
E K V T + +GIQDLE AI + I +G + N R L +
Sbjct: 344 DAERVKELAKGRPVVTTSLLKEEGIQDLEEAIQSLFYTGAIESGDLTYVSNTRHISILHQ 403
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
K+A+ + IE+++P+D IDL LG+I G+ + E ++ +F +FC+GK
Sbjct: 404 AKQAIDDALNGIEQDVPIDMVQIDLTRCWELLGEIIGDAVHESLIDQLFSQFCLGK 459
>sp|A0AMD2|MNME_LISW6 tRNA modification GTPase MnmE OS=Listeria welshimeri serovar 6b
(strain ATCC 35897 / DSM 20650 / SLCC5334) GN=mnmE PE=3
SV=1
Length = 457
Score = 328 bits (841), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 198/479 (41%), Positives = 280/479 (58%), Gaps = 30/479 (6%)
Query: 92 FSTIAAIVTSIGGPPG--AVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHV 149
F TIAAI T PPG A+ I+RLSGP A+ I R+F KK S SH
Sbjct: 3 FDTIAAIST----PPGEGAIAIIRLSGPEAIQIADRIFYA---KKNLSEAE------SHT 49
Query: 150 VEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLA 209
+ YG + G V++EV+ M APR++TREDVVE+ HG V + RVL+ L GA LA
Sbjct: 50 IHYGHI-KEDGEVIEEVMVTVMRAPRTFTREDVVEINAHGGIVSVNRVLQLLLRNGANLA 108
Query: 210 QPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIEL 269
+PGEFT RAFLNGR+DLSQAE V LI AK+ A A+ + G S L+ ++R + ++
Sbjct: 109 EPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRNLRQEILDA 168
Query: 270 LTEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRP 327
L ++E +D+ D++ + ++++K + VE L+TA+ K+L+ GL AI+GRP
Sbjct: 169 LAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLQTASQGKILREGLATAIIGRP 228
Query: 328 NVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIG 387
NVGKSSLLN + E+AIVT+IAGTTRD+IE V V GVP+ L+DTAGIRET+DIVEKIG
Sbjct: 229 NVGKSSLLNQLIQEEKAIVTDIAGTTRDIIEEYVNVRGVPLRLIDTAGIRETEDIVEKIG 288
Query: 388 VERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPS 447
VERS AD I++ ++ + T ED L + ++V+NK D
Sbjct: 289 VERSRKALADADFILLVLNQNEELTVEDEALF--------EAAAGHNYVVVLNKTDLETK 340
Query: 448 ASNEWNKVGNSFNDH--VFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQ 505
+ NKV ++ V T V +G++ LE AI + I AG + N R
Sbjct: 341 L--DINKVRELAGENPIVSTSLVNDEGLEALEEAIKTLFFAGDIDAGDATYVSNVRHIAL 398
Query: 506 LMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
L + EAL + + I+ +P+D ID+ A LG+I+G+ + +E+L +F +FC+GK
Sbjct: 399 LHQALEALNAVTTGIQLGMPVDIVQIDMTRAWDLLGEITGDSVQDELLDQLFNQFCLGK 457
>sp|A9VTM0|MNME_BACWK tRNA modification GTPase MnmE OS=Bacillus weihenstephanensis
(strain KBAB4) GN=mnmE PE=3 SV=1
Length = 458
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 190/479 (39%), Positives = 284/479 (59%), Gaps = 29/479 (6%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G GA+ IVR+SG A++ V R+FK G + +SH +
Sbjct: 3 FDTIAAISTALG--EGAIAIVRVSGDDAIEKVDRIFK----------GKDLTQVSSHTIH 50
Query: 152 YGVVLDRHGN-VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D N V++EV+ M APR++TRE++VE+ CHG V + +VL+ L G LA+
Sbjct: 51 YGHIVDLDTNQVIEEVMVSIMRAPRTFTRENIVEINCHGGLVSVNKVLQLILAQGVRLAE 110
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + A+ ++G S L+ +R + +E L
Sbjct: 111 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAINQMEGRLSKLIGHLRQEILETL 170
Query: 271 TEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
IE +D+ D++ + N++++K + ++ LET+ K+L+ G+ AI+GRPN
Sbjct: 171 AHIEVNIDYPEYDDVEEMTHNILIEKATHVRAEIAKILETSKQGKILREGISTAIIGRPN 230
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ + ++AIVT+IAGTTRDVIE V V GVP+ L+DTAGIRET+DIVE+IGV
Sbjct: 231 VGKSSLLNSLVQEKKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDIVERIGV 290
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS+ + AD++++ V+ + T+ED +L +Q I+++NK D
Sbjct: 291 ERSKEMMSQADLVLIVVNYSEALTNEDEDLFRAVQGK--------DFIVIVNKTDLPQEI 342
Query: 449 SNEWNK---VGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQ 505
E VGN + T + QGI +LE AI + I + + N R
Sbjct: 343 DMERVTDLAVGNRV---ITTSLIEEQGIDELEKAIADLFFEGTIDSADMTYVSNARHIGL 399
Query: 506 LMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
L + + +IE +P+D IDL A LG+I+G+ + E ++ +F +FC+GK
Sbjct: 400 LTQAGRTINDAIEAIENGVPIDMVQIDLTRAWEILGEITGDTVHESLIDQLFSQFCLGK 458
>sp|Q71VV0|MNME_LISMF tRNA modification GTPase MnmE OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=mnmE PE=3 SV=1
Length = 457
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/477 (41%), Positives = 278/477 (58%), Gaps = 26/477 (5%)
Query: 92 FSTIAAIVTSIGGPPG--AVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHV 149
F TIAAI T PPG A+ I+RLSGP A+ I R+F K+S S SH
Sbjct: 3 FDTIAAIST----PPGEGAIAIIRLSGPEAIQIADRIFYA------KNSLS---EAESHT 49
Query: 150 VEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLA 209
+ YG + G V++EV+ M APR++TREDVVE+ HG V + RVL+ L GA LA
Sbjct: 50 IHYGHI-KEDGEVIEEVMVTVMRAPRTFTREDVVEINAHGGIVSVNRVLQLLLRNGANLA 108
Query: 210 QPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIEL 269
+PGEFT RAFLNGR+DLSQAE V LI AK+ A A+ + G S L+ ++R + ++
Sbjct: 109 EPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRNLRQEILDA 168
Query: 270 LTEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRP 327
L ++E +D+ D++ + ++++K + VE L+TA+ K+L+ GL AI+GRP
Sbjct: 169 LAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLQTASQGKILREGLATAIIGRP 228
Query: 328 NVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIG 387
NVGKSSLLN + E+AIVT+IAGTTRD+IE V V GVP+ L+DTAGIRET+DIVEKIG
Sbjct: 229 NVGKSSLLNQLIQEEKAIVTDIAGTTRDIIEEYVNVRGVPLRLIDTAGIRETEDIVEKIG 288
Query: 388 VERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPS 447
VERS AD I++ ++ + T ED L + ++V+NK D
Sbjct: 289 VERSRKALADADFILLVLNQNEELTVEDEALF--------EAAAGHNYVVVLNKTDLETK 340
Query: 448 ASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLM 507
+ + N V T V +G++ LE AI + I AG + N R L
Sbjct: 341 LDIDRVRELAGENPIVSTSLVNDEGLEALEEAIKTLFFAGDIDAGDATYVSNVRHIALLH 400
Query: 508 RTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ EAL + + I+ +P+D ID+ A LG+I+G+ + +E+L +F +FC+GK
Sbjct: 401 QALEALNGVTTGIQLGMPVDIVQIDMTRAWDLLGEITGDSVQDELLDQLFNQFCLGK 457
>sp|Q814F6|MNME_BACCR tRNA modification GTPase MnmE OS=Bacillus cereus (strain ATCC 14579
/ DSM 31) GN=mnmE PE=3 SV=1
Length = 458
Score = 325 bits (834), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 187/476 (39%), Positives = 283/476 (59%), Gaps = 23/476 (4%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G GA+ IVR+SG AV+ V R+FK G SH +
Sbjct: 3 FDTIAAISTALG--EGAIAIVRVSGDDAVEKVDRIFK----------GKDLTEVPSHTIH 50
Query: 152 YGVVLDRHGN-VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D N V++EV+ M APR++TRE++VE+ CHG V + +VL+ L G LA+
Sbjct: 51 YGHIVDLDTNQVIEEVMVSIMRAPRTFTRENIVEINCHGGLVSVNKVLQLILAQGVRLAE 110
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + A+ ++G S L+ +R + +E L
Sbjct: 111 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAINQMEGRLSKLIGLLRQEILETL 170
Query: 271 TEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+E +D+ D++ + N++++K + ++E LET+ K+L+ G+ AI+GRPN
Sbjct: 171 AHVEVNIDYPEYDDVEEMTHNILIEKATHVRSEIEKILETSKQGKILREGIATAIIGRPN 230
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ + ++AIVT+IAGTTRDVIE V V GVP+ L+DTAGIRET+D+VE+IGV
Sbjct: 231 VGKSSLLNSLVQEKKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDVVERIGV 290
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS+ + AD++++ V+ + T+ED +L +Q I+++NK D +
Sbjct: 291 ERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--------DFIVIVNKTDLPQAI 342
Query: 449 SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMR 508
E + N + T + QGI +LE AI + I + + N R L +
Sbjct: 343 DMERVTELAAGNRVITTSLIEEQGIDELEKAIADLFFEGTIDSADMTYVSNARHIGLLTQ 402
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ + +IE +P+D IDL LG+I+G+ + E ++ +F +FC+GK
Sbjct: 403 AGKTIGDAVEAIENGVPIDMVQIDLTRTWEILGEITGDTVHESLIDQLFSQFCLGK 458
>sp|Q926U7|MNME_LISIN tRNA modification GTPase MnmE OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=mnmE PE=3 SV=1
Length = 457
Score = 325 bits (834), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 197/479 (41%), Positives = 281/479 (58%), Gaps = 30/479 (6%)
Query: 92 FSTIAAIVTSIGGPPG--AVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHV 149
F TIAAI T PPG A+ I+RLSGP A+ I R+F K+S S SH
Sbjct: 3 FDTIAAIST----PPGEGAIAIIRLSGPEAIQIADRIFYA------KNSLS---EAESHT 49
Query: 150 VEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLA 209
+ YG + G V++EV+ M APR++TREDVVE+ HG V + RVL+ L GA LA
Sbjct: 50 IHYGHI-KEDGEVIEEVMVTVMRAPRTFTREDVVEINAHGGIVSVNRVLQLLLRNGANLA 108
Query: 210 QPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIEL 269
+PGEFT RAFLNGR+DLSQAE V LI AK+ A A+ + G S L+ ++R + ++
Sbjct: 109 EPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRNLRQEILDA 168
Query: 270 LTEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRP 327
L ++E +D+ D++ + ++++K + VE L+TA+ K+L+ GL AI+GRP
Sbjct: 169 LAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLQTASQGKILREGLATAIIGRP 228
Query: 328 NVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIG 387
NVGKSSLLN + E+AIVT+IAGTTRD+IE V V GVP+ L+DTAGIRET+DIVEKIG
Sbjct: 229 NVGKSSLLNQLIQEEKAIVTDIAGTTRDIIEEYVNVRGVPLRLIDTAGIRETEDIVEKIG 288
Query: 388 VERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPS 447
VERS AD I++ ++ + T ED L + ++V+NK D
Sbjct: 289 VERSRKALADADFILLVLNQNEELTVEDEALF--------EAAAGHNYVVVLNKTDLETK 340
Query: 448 ASNEWNKVGNSFNDH--VFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQ 505
+ N+V ++ V T V +G++ LE AI + I AG + N R
Sbjct: 341 L--DINRVRELAGENPIVSTSLVNDEGLEALEEAIKALFFAGDIDAGDATYVSNVRHIAL 398
Query: 506 LMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
L + EAL + + I+ +P+D ID+ A LG+I+G+ + +E+L +F +FC+GK
Sbjct: 399 LHQALEALNGVTTGIQLGMPVDIVQIDMTRAWDLLGEITGDSVQDELLDQLFNQFCLGK 457
>sp|Q8Y3M4|MNME_LISMO tRNA modification GTPase MnmE OS=Listeria monocytogenes serovar
1/2a (strain ATCC BAA-679 / EGD-e) GN=mnmE PE=3 SV=1
Length = 457
Score = 325 bits (833), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 196/477 (41%), Positives = 277/477 (58%), Gaps = 26/477 (5%)
Query: 92 FSTIAAIVTSIGGPPG--AVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHV 149
F TIAAI T PPG A+ I+RLSGP A+ I R+F K+S S SH
Sbjct: 3 FDTIAAIST----PPGEGAIAIIRLSGPEAIQIADRIFYA------KNSLS---EAESHT 49
Query: 150 VEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLA 209
+ YG + G V++EV+ M APR++TREDVVE+ HG V + RVL+ L GA LA
Sbjct: 50 IHYGHI-KEDGEVIEEVMVTVMRAPRTFTREDVVEINAHGGIVSVNRVLQLLLRNGANLA 108
Query: 210 QPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIEL 269
+PGEFT RAFLNGR+DLSQAE V LI AK+ A A+ + G S L+ ++R + ++
Sbjct: 109 EPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRNLRQEILDA 168
Query: 270 LTEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRP 327
L ++E +D+ D++ + ++++K + VE L TA+ K+L+ GL AI+GRP
Sbjct: 169 LAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLRTASQGKILREGLATAIIGRP 228
Query: 328 NVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIG 387
NVGKSSLLN + E+AIVT+IAGTTRD+IE V V GVP+ L+DTAGIRET+DIVEKIG
Sbjct: 229 NVGKSSLLNQLIQEEKAIVTDIAGTTRDIIEEYVNVRGVPLRLIDTAGIRETEDIVEKIG 288
Query: 388 VERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPS 447
VERS AD I++ ++ + T ED L + ++V+NK D
Sbjct: 289 VERSRKALADADFILLVLNQNEELTVEDEALF--------EAAAGHNYVVVLNKTDLETK 340
Query: 448 ASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLM 507
+ + N V T V +G++ LE AI + I AG + N R L
Sbjct: 341 LDIDRVRELAGENPIVSTSLVNDEGLEALEEAIKTLFFAGDIDAGDATYVSNVRHIALLH 400
Query: 508 RTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ EAL + + I+ +P+D ID+ A LG+I+G+ + +E+L +F +FC+GK
Sbjct: 401 QALEALNGVTTGIQLGMPVDIVQIDMTRAWDLLGEITGDSVQDELLDQLFNQFCLGK 457
>sp|A5GPA1|MNME_SYNPW tRNA modification GTPase MnmE OS=Synechococcus sp. (strain WH7803)
GN=mnmE PE=3 SV=1
Length = 460
Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 188/461 (40%), Positives = 283/461 (61%), Gaps = 26/461 (5%)
Query: 107 GAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVL-DRHGNVVDE 165
G + ++RLSGP A + + + G SW SH V YG VL G +DE
Sbjct: 23 GGIAVIRLSGPQA--------QAAVQSVTRIPGQQSW--ESHRVLYGHVLAGESGERIDE 72
Query: 166 VLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEA-GATLAQPGEFTLRAFLNGRL 224
VL + MLAPRS+T EDVVE+ CHG + ++RVL L+ G A PGEF+ RA LNGRL
Sbjct: 73 VLVLLMLAPRSFTGEDVVEIHCHGGVIAVQRVLARVLDQPGVRRALPGEFSQRAVLNGRL 132
Query: 225 DLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMP 284
DL++AE + L++A+S AA+ A+AG+ GG +T++R + ++ L+E+EAR+DF++++P
Sbjct: 133 DLTRAEAISDLVAARSQRAAELAMAGVDGGIQKRITALRDRLLDQLSELEARVDFEEDLP 192
Query: 285 PLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERA 344
L+ +++++ + ++ ++ L+ GL++A+VGRPNVGKSSLLN S+ ERA
Sbjct: 193 ALDGAALLEELQRVRGALQQLVKDGQVGAALRQGLRVALVGRPNVGKSSLLNRLSRRERA 252
Query: 345 IVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMT 404
IVT++ GTTRD++E+ + + GVP+TLLDTAGIR T D VE++G+ RS AD++++
Sbjct: 253 IVTDLPGTTRDLLESEIVLEGVPITLLDTAGIRATSDAVERLGIARSHDALASADLVLLL 312
Query: 405 VSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFN-DHV 463
GWT +D L RI ++ P +LV NK+D A S + + G S + +
Sbjct: 313 FDLSVGWTPDDEALRQRI-------PAAVPHLLVGNKVDVAVSDA----RAGTSGSAADI 361
Query: 464 FTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEE 523
A TG G +L A+++ G + G ++NQRQ + + +AL R +
Sbjct: 362 RLSASTGAGEAELVQAVLERCG--ALADGSLLLSLNQRQGDLAQQAADALARSAQVAADG 419
Query: 524 LPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
LP DFWTIDLR A +LG+I+GE+++E VL IF +FCIGK
Sbjct: 420 LPWDFWTIDLRQAIHSLGEITGEELTESVLDRIFSRFCIGK 460
>sp|A7GVP7|MNME_BACCN tRNA modification GTPase MnmE OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=mnmE PE=3 SV=1
Length = 458
Score = 324 bits (831), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 185/476 (38%), Positives = 283/476 (59%), Gaps = 23/476 (4%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G GA+ IVR+SG A++ V R+FK G +SH +
Sbjct: 3 FDTIAAISTALG--EGAIAIVRVSGEDAIEKVNRIFK----------GKDLTAVSSHTIH 50
Query: 152 YGVVLDRHGN-VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D N V++EV+ M AP+++TRED+VE+ CHG V + +VL+ L G LA+
Sbjct: 51 YGHIVDLDTNQVIEEVMVSIMRAPKTFTREDIVEVNCHGGLVSVNKVLQLILAQGVRLAE 110
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + A+ ++G S L+ +R + +E L
Sbjct: 111 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAINQMEGRLSKLIGRLRQEILETL 170
Query: 271 TEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+E +D+ D++ + ++++K + ++E LET+ K+L+ G+ AI+GRPN
Sbjct: 171 AHVEVNIDYPEYDDVEEMTHRILIEKATHVQNEIEKILETSKQGKILREGIATAIIGRPN 230
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ + ++AIVT+IAGTTRDVIE V V GVP+ L+DTAGIRET+DIVE+IGV
Sbjct: 231 VGKSSLLNSLVQEKKAIVTDIAGTTRDVIEEYVNVRGVPLRLIDTAGIRETEDIVEQIGV 290
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS+ + AD++++ V+ + T+ED EL +Q I+++NK D
Sbjct: 291 ERSKEMMSQADLVLIVVNYSEPLTNEDEELFRAVQGK--------DFIVIVNKTDLPQKI 342
Query: 449 SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMR 508
E S + T + +G+ +LE AI + I + + N R L +
Sbjct: 343 EMERVTELASEKRVITTSLIEEKGVDELEKAIADLFFEGTIESADMTYVSNARHIGLLTQ 402
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
++ + ++IE +P+D IDL LG+I+G+ + E ++ +F +FC+GK
Sbjct: 403 ARKTIGDAIAAIENGVPIDMVQIDLTRTWEILGEITGDTVHESLIDQLFSQFCLGK 458
>sp|Q72WU3|MNME_BACC1 tRNA modification GTPase MnmE OS=Bacillus cereus (strain ATCC
10987) GN=mnmE PE=3 SV=1
Length = 458
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/476 (39%), Positives = 282/476 (59%), Gaps = 23/476 (4%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G GA+ IVR+SG AV+ V R+FK G SH +
Sbjct: 3 FDTIAAISTALG--EGAIAIVRVSGDDAVEKVNRIFK----------GKDLTEVPSHTIH 50
Query: 152 YGVVLDRHGN-VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D N V++EV+ M APR++TRE++VE+ CHG V + +VL+ L G LA+
Sbjct: 51 YGHIVDLDTNQVIEEVMVSIMRAPRTFTRENIVEINCHGGLVSVNKVLQLILAQGVRLAE 110
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + A+ ++G S L+ +R +E L
Sbjct: 111 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAINQMEGRLSKLIGRLRQDILETL 170
Query: 271 TEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+E +D+ D++ + N++++K + ++ LET+ K+L+ G+ AI+GRPN
Sbjct: 171 AHVEVNIDYPEYDDVEEMTHNILIEKATHVRAEIAKILETSKQGKILREGIATAIIGRPN 230
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ + ++AIVT+IAGTTRDVIE V V GVP+ L+DTAGIRET+D+VE+IGV
Sbjct: 231 VGKSSLLNSLVQEKKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDVVERIGV 290
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS+ + AD++++ V+ + T+ED +L +Q I+++NK D +
Sbjct: 291 ERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--------DFIVIVNKTDLPQAI 342
Query: 449 SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMR 508
E + N + T + QGI +LETAI + I + + N R L +
Sbjct: 343 DMERVIELAAGNRIITTSLIEEQGIDELETAIADLFFEGTIDSADVTYVSNARHIGLLTQ 402
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ + +IE +P+D IDL LG+I+G+ + E ++ +F +FC+GK
Sbjct: 403 AGKTIGDAIEAIENGVPIDMVQIDLTRTWEILGEITGDTVHESLIDQLFSQFCLGK 458
>sp|A0RLR2|MNME_BACAH tRNA modification GTPase MnmE OS=Bacillus thuringiensis (strain Al
Hakam) GN=mnmE PE=3 SV=1
Length = 458
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/477 (39%), Positives = 284/477 (59%), Gaps = 25/477 (5%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G GA+ IVR+SG AV+ V R+FK G SH +
Sbjct: 3 FDTIAAISTALG--EGAIAIVRVSGDDAVEKVNRIFK----------GKDLTEVPSHTIH 50
Query: 152 YGVVLDRHGN-VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D N V++EV+ M APR++TRE++VE+ CHG V + +VL+ L G LA+
Sbjct: 51 YGHIVDLDTNQVIEEVMVSIMRAPRTFTRENIVEINCHGGLVSVNKVLQLILAQGVRLAE 110
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + A+ ++G S L+ +R +E L
Sbjct: 111 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAINQMEGRLSKLIGRLRQDILETL 170
Query: 271 TEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+E +D+ D++ + N++++K + ++ LET+ K+L+ G+ AI+GRPN
Sbjct: 171 AHVEVNIDYPEYDDVEEMTHNILIEKATHVRSEIAKILETSKQGKILREGIATAIIGRPN 230
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ + ++AIVT+IAGTTRDVIE V V GVP+ L+DTAGIRET+D+VE+IGV
Sbjct: 231 VGKSSLLNSLVQEKKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDVVERIGV 290
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS+ + AD++++ V+ + T+ED EL +Q I+++NK D P A
Sbjct: 291 ERSKEMMSQADLVLVVVNYSEALTNEDEELFRAVQGK--------DFIVIVNKTDL-PQA 341
Query: 449 SNEWNKVGNSFNDHVFTCA-VTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLM 507
+ + + + V T + + QGI +LE AI + I + + N R L
Sbjct: 342 IDMERVIELAAGNRVITTSLIEEQGIDELEKAIADLFFEGTIDSADVTYVSNARHIGLLT 401
Query: 508 RTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ + + +IE +P+D IDL LG+I+G+ + E ++ +F +FC+GK
Sbjct: 402 QAGKTIGDAIEAIENGVPIDMVQIDLTRTWEILGEITGDTVHESLIDQLFSQFCLGK 458
>sp|A3DHY8|MNME_CLOTH tRNA modification GTPase MnmE OS=Clostridium thermocellum (strain
ATCC 27405 / DSM 1237) GN=mnmE PE=3 SV=1
Length = 459
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/475 (38%), Positives = 285/475 (60%), Gaps = 25/475 (5%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
TIAAI T G G VGI+R+SG A +I R+F+ K K SH + YG
Sbjct: 6 TIAAISTPHG--AGGVGIIRISGDKAFEIAERIFRGKKDFK---------LIRSHTINYG 54
Query: 154 VVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPG 212
+++ +G V+DEVL M P+++TREDVVE+ CHG V L+ +L C++ GA LA+PG
Sbjct: 55 KIVNPENGAVLDEVLLSKMEKPKTFTREDVVEINCHGGMVVLKNILELCIKEGARLAEPG 114
Query: 213 EFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTE 272
EFT RAFLNGR+DLSQAE V LI++K+ ++ AA++ ++G S + R+K IELL
Sbjct: 115 EFTKRAFLNGRIDLSQAEAVIDLINSKTNESSKAAISQLEGKLSRKIKDARSKLIELLAH 174
Query: 273 IEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGK 331
IE +D+ + ++ + N+V ++I + + + + +++ ++++ G+ I+G+PNVGK
Sbjct: 175 IEVTVDYPEHDIEEITGNMVYEEIGKIKEKLCDIVKSFERGRIIREGIDAVIIGKPNVGK 234
Query: 332 SSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERS 391
SSLLN S +AIVT+I GTTRD+IE + + G+P+ ++DTAGIRET+D+VEKIGVE++
Sbjct: 235 SSLLNELSGKSKAIVTDIPGTTRDIIEEYININGIPLRIIDTAGIRETEDVVEKIGVEKT 294
Query: 392 EAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNE 451
AD++IM + A G +D+ +L + K +I++INKID +
Sbjct: 295 HRAIDEADLVIMMIDAKRGMDEDDNRILTMLGDKK--------LIILINKIDLVD--EKQ 344
Query: 452 WNKVGNSFNDH--VFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRT 509
N++ + + T G GI +LE AI ++ ++ N R +
Sbjct: 345 INEIESLLKGRKCIRTSVKEGTGISELENAITELFVQGEVSVNEEILLTNIRHKNLIDMA 404
Query: 510 KEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
++ + SI+ +PLD +ID+ DAA LGQI+GE +SE+V+ IF KFC+GK
Sbjct: 405 ISSIEKAMESIDGSMPLDLVSIDITDAADYLGQITGESVSEDVMHEIFSKFCLGK 459
>sp|Q630B8|MNME_BACCZ tRNA modification GTPase MnmE OS=Bacillus cereus (strain ZK / E33L)
GN=mnmE PE=3 SV=1
Length = 458
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/477 (39%), Positives = 284/477 (59%), Gaps = 25/477 (5%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G GA+ IVR+SG AV+ V R+FK G SH +
Sbjct: 3 FDTIAAISTALG--EGAIAIVRVSGDDAVEKVNRIFK----------GKDLTEVPSHTIH 50
Query: 152 YGVVLDRHGN-VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D N V++EV+ M APR++TRE++VE+ CHG V + +VL+ L G LA+
Sbjct: 51 YGHIVDLDTNQVIEEVMVSIMRAPRTFTRENIVEINCHGGLVSVNKVLQLILAQGVRLAE 110
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + A+ ++G S L+ +R +E L
Sbjct: 111 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAINQMEGRLSKLIGRLRQDILETL 170
Query: 271 TEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+E +D+ D++ + N++++K + ++ LET+ K+L+ G+ AI+GRPN
Sbjct: 171 AHVEVNIDYPEYDDVEEMTHNILIEKATHVRAEIAKILETSKQGKILREGIATAIIGRPN 230
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ + ++AIVT+IAGTTRDVIE V V GVP+ L+DTAGIRET+D+VE+IGV
Sbjct: 231 VGKSSLLNSLVQEKKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDVVERIGV 290
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS+ + AD++++ V+ + T+ED EL +Q I+++NK D P A
Sbjct: 291 ERSKEMMSQADLVLVVVNYSEALTNEDEELFRAVQGK--------DFIVIVNKTDL-PQA 341
Query: 449 SNEWNKVGNSFNDHVFTCA-VTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLM 507
+ + + + V T + + QGI +LE AI + I + + N R L
Sbjct: 342 IDMERVIELAAGNRVITTSLIEEQGIDELEKAIADLFFEGTIDSADVTYVSNARHIGLLT 401
Query: 508 RTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ + + +IE +P+D IDL LG+I+G+ + E ++ +F +FC+GK
Sbjct: 402 QAGKTIGDAIEAIENGVPIDMVQIDLTRTWEILGEITGDTVHESLIDQLFSQFCLGK 458
>sp|Q6HAF2|MNME_BACHK tRNA modification GTPase MnmE OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=mnmE PE=3 SV=1
Length = 458
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 188/477 (39%), Positives = 284/477 (59%), Gaps = 25/477 (5%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G GA+ IVR+SG AV+ V R+FK G SH +
Sbjct: 3 FDTIAAISTALG--EGAIAIVRVSGDDAVEKVNRIFK----------GKDLTEVPSHTIH 50
Query: 152 YGVVLDRHGN-VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D N V++EV+ M APR++TRE++VE+ CHG V + +VL+ L G LA+
Sbjct: 51 YGHIVDLDTNQVIEEVMVSIMRAPRTFTRENIVEINCHGGLVSVNKVLQLILAQGVRLAE 110
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + A+ ++G S L+ +R +E L
Sbjct: 111 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAINQMEGRLSKLIGRLRQDILETL 170
Query: 271 TEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+E +D+ D++ + N++++K + ++ LET+ K+L+ G+ AI+GRPN
Sbjct: 171 AHVEVNIDYPEYDDVEEMTHNILIEKATHVRAEIAKILETSKQGKILREGIATAIIGRPN 230
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ + ++AIVT+IAGTTRDVIE V V GVP+ L+DTAGIRET+D+VE+IGV
Sbjct: 231 VGKSSLLNSLVQEKKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDVVERIGV 290
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS+ + AD++++ V+ + T+ED EL +Q I+++NK D P A
Sbjct: 291 ERSKEMMSQADLVLVVVNYSETLTNEDEELFRAVQGK--------DFIVIVNKTDL-PQA 341
Query: 449 SNEWNKVGNSFNDHVFTCA-VTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLM 507
+ + + + V T + + QGI +LE AI + I + + N R L
Sbjct: 342 IDMERVIELAAGNRVITTSLIEEQGIDELEKAIADLFFEGTIDSADVTYVSNARHIGLLT 401
Query: 508 RTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ + + +IE +P+D IDL LG+I+G+ + E ++ +F +FC+GK
Sbjct: 402 QAGKTIGDAIEAIENGVPIDMVQIDLTRTWEILGEITGDTVHESLIDQLFSQFCLGK 458
>sp|Q81JD9|MNME_BACAN tRNA modification GTPase MnmE OS=Bacillus anthracis GN=mnmE PE=3
SV=1
Length = 458
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 188/477 (39%), Positives = 284/477 (59%), Gaps = 25/477 (5%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G GA+ IVR+SG AV+ V R+FK G SH +
Sbjct: 3 FDTIAAISTALG--EGAIAIVRVSGDDAVEKVNRIFK----------GKDLTEVPSHTIH 50
Query: 152 YGVVLDRHGN-VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D N V++EV+ M APR++TRE++VE+ CHG V + +VL+ L G LA+
Sbjct: 51 YGHIVDLDTNQVIEEVMVSIMRAPRTFTRENIVEINCHGGLVSVNKVLQLILAQGVRLAE 110
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + A+ ++G S L+ +R +E L
Sbjct: 111 PGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAINQMEGRLSKLIGRLRQDILETL 170
Query: 271 TEIEARLDF--DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
+E +D+ D++ + N++++K + ++ LET+ K+L+ G+ AI+GRPN
Sbjct: 171 AHVEVNIDYPEYDDVEEMTHNILIEKATHVRAEIAKILETSKQGKILREGIATAIIGRPN 230
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLN+ + ++AIVT+IAGTTRDVIE V V GVP+ L+DTAGIRET+D+VE+IGV
Sbjct: 231 VGKSSLLNSLVQEKKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDVVERIGV 290
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
ERS+ + AD++++ V+ + T+ED EL +Q I+++NK D P A
Sbjct: 291 ERSKEMMSQADLVLVVVNYSETLTNEDEELFRAVQGK--------DFIVIVNKTDL-PQA 341
Query: 449 SNEWNKVGNSFNDHVFTCA-VTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLM 507
+ + + + V T + + QGI +LE AI + I + + N R L
Sbjct: 342 IDMERVIELAAGNRVITTSLIEEQGIDELEKAIADLFFEGTIDSADVTYVSNARHIGLLT 401
Query: 508 RTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ + + +IE +P+D IDL LG+I+G+ + E ++ +F +FC+GK
Sbjct: 402 QAGKTIGDAIEAIENGVPIDMVQIDLTRTWEILGEITGDTVHESLIDQLFSQFCLGK 458
>sp|Q5KU57|MNME_GEOKA tRNA modification GTPase MnmE OS=Geobacillus kaustophilus (strain
HTA426) GN=mnmE PE=3 SV=1
Length = 462
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 203/479 (42%), Positives = 280/479 (58%), Gaps = 26/479 (5%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T +G GA+ IVRLSG AV+I R+F+ K+ K SH +
Sbjct: 4 FDTIAAISTPMG--EGAIAIVRLSGDQAVEIADRLFRSPSGKRLKDV-------PSHTIH 54
Query: 152 YGVVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D + G VV+EV+ M AP+++TREDVVE+ CHG V + RVL+ L GA LA+
Sbjct: 55 YGHIIDPKSGRVVEEVMVSVMRAPKTFTREDVVEINCHGGFVSVNRVLQLVLANGARLAE 114
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + AL ++G S L+ +R +E L
Sbjct: 115 PGEFTKRAFLNGRIDLSQAEAVIDLIRAKTDRAMNVALQQMEGRLSKLIRELRQTILETL 174
Query: 271 TEIEARLDF---DD--EMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVG 325
+E +D+ DD EM P L+ +K + +E L TA K+L+ GL I+G
Sbjct: 175 AHVEVNIDYPEYDDVEEMTP---RLLREKAEYVRGQIEKLLSTAAQGKILREGLATVIIG 231
Query: 326 RPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEK 385
RPNVGKSSLLNA + RAIVT+I GTTRDVIE V V GVP+ L+DTAGIRET+D+VE+
Sbjct: 232 RPNVGKSSLLNALAHENRAIVTDIPGTTRDVIEEYVNVRGVPLRLIDTAGIRETEDVVER 291
Query: 386 IGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCA 445
IGVERS+ + AD+I++ ++ + T ED L I+ I+++NK D
Sbjct: 292 IGVERSQQMLKRADLILLVLNYHEPLTEEDERLFAMIE--------GMDAIVIVNKTDLP 343
Query: 446 PSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQ 505
E K + V T + QGI +LE AI + ++ AG + N R
Sbjct: 344 RRIDMERVKELAAGRPVVGTSLLHEQGIDELEKAIADLFFGGELEAGDLTYVSNSRHIAL 403
Query: 506 LMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
L + K A+ + I+ +P+D IDLR A LG+I G+ + E ++ +F +FC+GK
Sbjct: 404 LEQAKTAIEDALAGIDAGMPVDLVQIDLRRAWELLGEIIGDTVHESLIDQLFAQFCLGK 462
>sp|Q9RCA7|MNME_BACHD tRNA modification GTPase MnmE OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=mnmE PE=3 SV=1
Length = 458
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/475 (39%), Positives = 280/475 (58%), Gaps = 21/475 (4%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G GA+GIVRLSG AV + RV++ K ++ SH +
Sbjct: 3 FDTIAAISTALG--EGAIGIVRLSGDEAVQLADRVYRGKKPLQE---------VPSHTIV 51
Query: 152 YGVVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQ 210
YG ++D + ++DEV+ + APR++TREDV+E+ CHG V + RVL+ L GA LA+
Sbjct: 52 YGHIVDPKTDEIIDEVMVSVLRAPRTFTREDVIEINCHGGLVSVNRVLQLVLNHGARLAE 111
Query: 211 PGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELL 270
PGEFT RAFLNGR+DLSQAE V LI AK+ A + AL ++G S+ ++S+R +E +
Sbjct: 112 PGEFTKRAFLNGRIDLSQAEGVIDLIRAKTDRAMNVALKQVEGRLSTKISSLRQALLETV 171
Query: 271 TEIEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNV 329
+E +D+ + + + L+++ D+ + ++++ L TA K+L+ GL I+GRPNV
Sbjct: 172 AHVEVNIDYPEYDAETMTLDMLKDRAQFVRKEIDKLLMTAQQGKILREGLSTVIIGRPNV 231
Query: 330 GKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVE 389
GKSSLLN+ +AIVT+I GTTRDVIE V V GVP+ L+DTAGIRET+DIVE+IGVE
Sbjct: 232 GKSSLLNSLVHENKAIVTDIPGTTRDVIEEYVNVRGVPLRLVDTAGIRETEDIVERIGVE 291
Query: 390 RSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSAS 449
RS V A++I++ ++ + + ED L I S I+++NK D
Sbjct: 292 RSREVLKEAELILLVLNFGEELSKEDEALFEAI--------SGMEAIVIVNKTDVEQKID 343
Query: 450 NEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRT 509
+ + + T V QGI +LE AI + I +G + N R L +
Sbjct: 344 LTRVRELAAGRPVITTSIVQDQGIDELEAAIASLFFESGIESGDVTYVSNSRHIALLEQA 403
Query: 510 KEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
K A+ +IE ++P+D ID+ A LG+I G+ + E ++ +F +FC+GK
Sbjct: 404 KRAVEDALEAIEMDVPIDMVQIDITRAWELLGEIIGDSVHESLIDQLFSQFCLGK 458
>sp|A5CY46|MNME_PELTS tRNA modification GTPase MnmE OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=mnmE PE=3 SV=1
Length = 459
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/474 (39%), Positives = 278/474 (58%), Gaps = 20/474 (4%)
Query: 93 STIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEY 152
TIAAI T IG G +GIVR+SGP AV + + F K+K +GS H + Y
Sbjct: 4 DTIAAISTPIG--EGGIGIVRISGPDAVKVAKKFF-LTKRKDWDQAGS-------HRLIY 53
Query: 153 GVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPG 212
G V DR GN+VDEVL M APR+YTREDVVE+ CHG V LR+VL L GA LA+PG
Sbjct: 54 GHVFDREGNIVDEVLLSFMRAPRTYTREDVVEINCHGGIVPLRKVLELALANGARLAEPG 113
Query: 213 EFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTE 272
EF+ RAFLNGRLDL+QAE+V +I +K+ A A++ ++G S V ++ + + LL +
Sbjct: 114 EFSKRAFLNGRLDLAQAESVIDIIRSKTEAGLRVAVSQLRGDLSRKVEDLQGRLLGLLAQ 173
Query: 273 IEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGK 331
+EA +DF +D++ + ++ + ++++ + A K+ + G+ I+GRPNVGK
Sbjct: 174 VEANIDFPEDDLEEATVEDILRSGEDLIEEIKEIVRRAEAGKIYREGISTVIIGRPNVGK 233
Query: 332 SSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERS 391
SSLLNA + RAIVT+I GTTRD+IE + + G+P+ ++DTAG+RET D VE+IGVE++
Sbjct: 234 SSLLNALLRENRAIVTDIPGTTRDIIEEYINIRGIPLKIIDTAGLRETGDAVERIGVEKA 293
Query: 392 EAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDC-APSASN 450
AD++++ + A G T ED ++ ++ K +I ++NK D S+
Sbjct: 294 REAVEQADLVLLVLDAARGLTEEDYAIIEKVGGKK--------VIFIVNKADVREKKISS 345
Query: 451 EWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTK 510
E ++ A+ G G+ LE I+++V Q+ N R + R
Sbjct: 346 EGAARIAGGRPVLWISALEGTGLDKLEEKIVEMVMGGQVYPKDELIISNTRHRMAMERAA 405
Query: 511 EALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ L S I + +P+D IDLR A +LG+I+G ++E+++ IF FCIGK
Sbjct: 406 DHLAEAVSGIRQNVPVDVVAIDLRAAWESLGEITGTTVTEDLIDRIFADFCIGK 459
>sp|A4J9S1|MNME_DESRM tRNA modification GTPase MnmE OS=Desulfotomaculum reducens (strain
MI-1) GN=mnmE PE=3 SV=1
Length = 461
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 292/475 (61%), Gaps = 22/475 (4%)
Query: 94 TIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYG 153
TI AI T++G G++G++R+SGP A+ I +VF+P K+ ++ ++ + YG
Sbjct: 5 TIVAIATALG--EGSIGVIRMSGPDAITIGKKVFRPKYNKE-------WYQKDNYKIIYG 55
Query: 154 VVLD-RHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPG 212
V++ G ++DEVL M P+S+T EDV+E+ CHG + LR+VL L GA A+PG
Sbjct: 56 HVINPETGEIIDEVLLSIMRGPKSFTAEDVIEISCHGGIIPLRKVLEVILRNGARHAEPG 115
Query: 213 EFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTE 272
EF+ R+FLNGRLDL+QAE++ +I AK+ A A A+ + G S V ++ K + LL +
Sbjct: 116 EFSKRSFLNGRLDLAQAESIIDIIRAKTDAGAKIAVNQLGGKLSEKVNGLQHKVLGLLAK 175
Query: 273 IEARLDF-DDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGK 331
IEA +DF +D++P NL + + +++ +++E+ L A+ K+ + GL+ IVG+PNVGK
Sbjct: 176 IEAIIDFPEDDIPEENLLGISKECNSLIKEIEHLLAYADTGKIYREGLKTVIVGKPNVGK 235
Query: 332 SSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERS 391
SSLLNA +RAIVT+I GTTRDVIE +++ GVP+ ++DTAG+RET D+VEKIGVE+S
Sbjct: 236 SSLLNALLHEQRAIVTDIPGTTRDVIEEILSIKGVPLKIIDTAGLRETQDLVEKIGVEKS 295
Query: 392 EAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA--S 449
+ AD+++ + A G + ED ++++ I+ K ++++INKID + S
Sbjct: 296 RELLNQADIVLFVLDATTGISDEDRKVIDLIKDKK--------VLILINKIDITKNKIDS 347
Query: 450 NEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRT 509
+E ++ N F++ + A G+ LE I +V +I + N R L R
Sbjct: 348 HEIRQLIN-FSEIIEISAQKEIGLDKLEETIFNMVVEGKITTTDSIFVSNSRHKHALERA 406
Query: 510 KEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
+ L+ ++E +P D +IDL+ + LG+I+G ++E+++ IF FCIGK
Sbjct: 407 MQHLLEASKGLQEYVPADLVSIDLKSSWEILGEITGNSVTEDLIDRIFSDFCIGK 461
>sp|Q8XH30|MNME_CLOPE tRNA modification GTPase MnmE OS=Clostridium perfringens (strain 13
/ Type A) GN=mnmE PE=3 SV=1
Length = 458
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/476 (39%), Positives = 285/476 (59%), Gaps = 24/476 (5%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G G + I+R+SG A++IV ++F+ + +G + +
Sbjct: 4 FDTIAAIATALG--EGGIAIIRVSGNKALEIVNKIFRGI-------NGKDLLDIKPYTMR 54
Query: 152 YGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQP 211
YG ++D + ++DEV+ M PRS+T ED VE+ CHG V +VL+ ++AGA LA+P
Sbjct: 55 YGHMIDENNEIIDEVIVSFMKGPRSFTAEDTVEINCHGGIVATNKVLQNVIKAGARLAEP 114
Query: 212 GEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLT 271
GEFT RAFLNGR+DLSQAE V +I+AK+ + +A+ QG S+ + ++R + +++L
Sbjct: 115 GEFTKRAFLNGRIDLSQAEAVMDIITAKTELSMKSAMTQSQGRLSTEINNLRKEALDILA 174
Query: 272 EIEARLDF--DDEMPPLNLNL-VMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
IE +DF DDE P + + V + + + V N ++TA+ KL++ GL + IVG+PN
Sbjct: 175 LIEYAVDFTEDDEEPDETIPVKVKEDVITLRGKVNNLIDTADEGKLIRDGLSMVIVGKPN 234
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLNA +RAIVT+IAGTTRDVIE + + G+PV L+DTAGIRET+D+VEKIGV
Sbjct: 235 VGKSSLLNALLNEKRAIVTDIAGTTRDVIEEYINLDGIPVRLVDTAGIRETEDVVEKIGV 294
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
E+S+ AD++I+ + ED E+++ I+ K I+++NK+D
Sbjct: 295 EKSKEKINEADLVILMLDTSRELDEEDKEIIDYIKDRK--------YIVLLNKVDLDRKL 346
Query: 449 SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMR 508
S+E + ++ + + A TG GI DL++ I + I A N R E L R
Sbjct: 347 SSE---IVDNLENKIELSAKTGFGIDDLKSKIKDLFFNGSIDAES-VMVTNTRHKEALYR 402
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
E L + + LD +I + A ALG+I+G ++ E++++ IF +FC GK
Sbjct: 403 ASENLDGALNGLNNNEFLDLVSIYVTSALRALGEITGAELEEDLVNKIFAEFCCGK 458
>sp|Q0TLZ4|MNME_CLOP1 tRNA modification GTPase MnmE OS=Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A) GN=mnmE PE=3 SV=1
Length = 458
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/476 (39%), Positives = 285/476 (59%), Gaps = 24/476 (5%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G G + I+R+SG A++IV ++F+ + +G + +
Sbjct: 4 FDTIAAIATALG--EGGIAIIRVSGNKALEIVNKIFRGI-------NGKDLLDIKPYTMR 54
Query: 152 YGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQP 211
YG ++D + ++DEV+ M PRS+T ED VE+ CHG V +VL+ ++AGA LA+P
Sbjct: 55 YGHMIDENNEIIDEVIVSFMKGPRSFTAEDTVEINCHGGIVATNKVLQNVIKAGARLAEP 114
Query: 212 GEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLT 271
GEFT RAFLNGR+DLSQAE V +I+AK+ + +A+ QG S+ + ++R + +++L
Sbjct: 115 GEFTKRAFLNGRIDLSQAEAVMDIITAKTELSMKSAMTQSQGRLSTEINNLRKEALDILA 174
Query: 272 EIEARLDF--DDEMPPLNLNL-VMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
IE +DF DDE P + + V + + + V N ++TA+ KL++ GL + IVG+PN
Sbjct: 175 LIEYAVDFTEDDEEPDETIPVKVKEDVITLRGKVNNLIDTADEGKLIRDGLSMVIVGKPN 234
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLNA +RAIVT+IAGTTRDVIE + + G+PV L+DTAGIRET+D+VEKIGV
Sbjct: 235 VGKSSLLNALLNEKRAIVTDIAGTTRDVIEEYINLDGIPVRLVDTAGIRETEDVVEKIGV 294
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
E+S+ AD++I+ + ED E+++ I+ K I+++NK+D
Sbjct: 295 EKSKEKINEADLVILMLDTSRELDEEDKEIIDYIKDRK--------YIVLLNKVDLDRKL 346
Query: 449 SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMR 508
S+E + ++ + + A TG GI DL++ I + I A N R E L R
Sbjct: 347 SSE---IVDNLENKIELSAKTGFGIDDLKSKIKDLFFNGSIDAES-VMVTNTRHKEALYR 402
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
E L + + LD +I + A ALG+I+G ++ E++++ IF +FC GK
Sbjct: 403 ASENLDGALNGLNNNEFLDLVSIYVTSALRALGEITGAELEEDLVNKIFAEFCCGK 458
>sp|Q0SPQ3|MNME_CLOPS tRNA modification GTPase MnmE OS=Clostridium perfringens (strain
SM101 / Type A) GN=mnmE PE=3 SV=1
Length = 458
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/476 (39%), Positives = 284/476 (59%), Gaps = 24/476 (5%)
Query: 92 FSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVE 151
F TIAAI T++G G + I+R+SG A++IV ++F+ + +G + +
Sbjct: 4 FDTIAAIATALG--EGGIAIIRVSGNKALEIVNKIFRGI-------NGKDLLDIKPYTMR 54
Query: 152 YGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQP 211
YG ++D + ++DEV+ M PRS+T ED VE+ CHG V +VL+ ++AGA LA+P
Sbjct: 55 YGHMIDENNEIIDEVIVSFMKGPRSFTAEDTVEINCHGGIVATNKVLQNVIKAGARLAEP 114
Query: 212 GEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLT 271
GEFT RAFLNGR+DLSQAE V +I+AK+ + +A+ QG S+ + ++R + +++L
Sbjct: 115 GEFTKRAFLNGRIDLSQAEAVMDIITAKTELSMKSAMTQSQGRLSTEINNLRKEALDILA 174
Query: 272 EIEARLDF--DDEMPPLNLNL-VMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPN 328
IE +DF DDE P + + V + + + V N ++TA+ KL++ GL + IVG+PN
Sbjct: 175 LIEYAVDFTEDDEEPDETIPVKVKEDVITLRGKVNNLIDTADEGKLIRDGLSMVIVGKPN 234
Query: 329 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGV 388
VGKSSLLNA RAIVT+IAGTTRDVIE + + G+PV L+DTAGIRET+D+VEKIGV
Sbjct: 235 VGKSSLLNALLNENRAIVTDIAGTTRDVIEEYINLDGIPVRLVDTAGIRETEDVVEKIGV 294
Query: 389 ERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSA 448
E+S+ AD++I+ + ED E+++ I+ K I+++NK+D
Sbjct: 295 EKSKEKINEADLVILMLDTSRELDEEDKEIIDYIKDRK--------YIVLLNKVDLDRKL 346
Query: 449 SNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMR 508
S+E + ++ + + A TG GI DL++ I + I A N R E L R
Sbjct: 347 SSE---IVDNLENKIELSAKTGFGIDDLKSKIKDLFFNGSIDAES-VMVTNTRHKEALYR 402
Query: 509 TKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 564
E L + + LD +I + A ALG+I+G ++ E++++ IF +FC GK
Sbjct: 403 ASENLDGALNGLNNNEFLDLVSIYVTSALRALGEITGAELEEDLVNKIFAEFCCGK 458
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,138,348
Number of Sequences: 539616
Number of extensions: 8566956
Number of successful extensions: 45662
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1621
Number of HSP's successfully gapped in prelim test: 934
Number of HSP's that attempted gapping in prelim test: 40171
Number of HSP's gapped (non-prelim): 3371
length of query: 564
length of database: 191,569,459
effective HSP length: 123
effective length of query: 441
effective length of database: 125,196,691
effective search space: 55211740731
effective search space used: 55211740731
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)