Citrus Sinensis ID: 008468

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560----

MALLPSLRSVITHQLHHRPPPPPPLLSIASFLFHKPKLRRTTCKNLSFSFSSSSKPITLNPLATPKDNTLVFKKDERLVADNGESEEKAGTFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK

ccccHHHHHHHHHHHccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccEEEEcccccccccEEEEEEcccccHHHHHHHHccccccccccccccccccccccEEEEEEEEcccccEEcEEEEEEcccccccccccEEEEcccccHHHHHHHHHHHHHcccccccccccHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHccccEEEEccccccHHHHHHHHHcccccEEcccccccccEEEEEEEEccEEEEEECcccccccccHHHHHHHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHcccccccccccEEEEEEccccccccccHHHHcccccccEEEEcccccccHHHHHHHHHHHHccccccccccEEEEcHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccc

*****SLRSVITHQLHHRPPPPPPLLSIASFLFHKPKLRRTTCKNL**********************TLVF******************TFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKK*******S*SWRPTSHVVEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK

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MALLPSLRSVITHQLHHRPPPPPPLLSIASFLFHKPKLRRTTCKNLSFSFSSSSKPITLNPLATPKDNTLVFKKDERLVADNGESEEKAGTFSTIAAIVTSIGGPPGAVGIVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLDRHGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPPLNLNLVMDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASNEWNKVGNSFNDHVFTCAVTGQGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQxxxxxxxxxxxxxxxxxxxxxLPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
tRNA modification GTPase MnmE	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.	probable	B8HSJ3
tRNA modification GTPase MnmE	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.	probable	Q5N638
tRNA modification GTPase MnmE	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.	probable	P25811

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3GEH, chain A
Confidence level:very confident
Coverage over the Query: 103-132,143-372,393-564
View the alignment between query and template
View the model in PyMOL