Query 008469
Match_columns 564
No_of_seqs 238 out of 1460
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 04:18:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k4i_A 3,4-dihydroxy-2-butanon 100.0 5.3E-77 1.8E-81 585.7 17.6 208 134-343 9-228 (233)
2 3mio_A DHBP synthase, 3,4-dihy 100.0 1.2E-76 4.2E-81 575.7 18.4 203 135-339 2-206 (206)
3 1tks_A 3,4-dihydroxy-2-butanon 100.0 1.8E-76 6.1E-81 573.5 18.2 199 136-336 4-203 (204)
4 1snn_A DHBP synthase, 3,4-dihy 100.0 1.3E-75 4.5E-80 575.2 13.7 198 137-337 1-222 (227)
5 1g57_A DHBP synthase, 3,4-dihy 100.0 2.9E-73 9.9E-78 556.5 16.6 203 137-341 13-215 (217)
6 2bz1_A GTP cyclohydrolase II; 100.0 3.2E-72 1.1E-76 542.9 11.0 194 341-535 2-195 (196)
7 1oi2_A Hypothetical protein YC 43.8 12 0.0004 39.5 2.8 88 360-483 44-136 (366)
8 4fd4_A Arylalkylamine N-acetyl 42.5 20 0.0007 31.5 3.9 37 476-512 154-190 (217)
9 2iu4_A DHA-DHAQ, dihydroxyacet 39.0 17 0.00058 37.8 3.1 58 391-484 68-125 (336)
10 3n2l_A OPRT, oprtase, orotate 38.9 76 0.0026 31.1 7.7 76 260-339 142-220 (238)
11 4h89_A GCN5-related N-acetyltr 38.9 23 0.0008 30.8 3.7 58 426-511 94-154 (173)
12 1y0n_A Hypothetical UPF0270 pr 38.8 24 0.00083 29.4 3.4 32 139-173 39-70 (78)
13 4e0a_A BH1408 protein; structu 37.4 24 0.00083 29.0 3.4 40 475-514 115-156 (164)
14 3ct4_A PTS-dependent dihydroxy 37.3 19 0.00063 37.5 3.1 88 360-484 37-129 (332)
15 3qb8_A A654L protein; GNAT N-a 36.1 29 0.001 29.9 3.9 58 426-511 113-170 (197)
16 2cyg_A Beta-1, 3-glucananse; e 35.7 17 0.00057 37.2 2.5 40 472-511 17-56 (312)
17 1aq0_A 1,3-1,4-beta-glucanase; 34.4 17 0.00057 37.1 2.2 41 471-511 16-56 (306)
18 1ghs_A 1,3-beta-glucanase; hyd 34.2 17 0.00059 37.0 2.3 40 472-511 17-56 (306)
19 3em5_A Beta-1,3-glucanase; gly 33.9 20 0.00067 36.9 2.6 40 472-511 18-57 (316)
20 3te4_A GH12636P, dopamine N ac 30.8 29 0.001 31.3 3.0 38 475-512 152-189 (215)
21 3ur8_A Glucan endo-1,3-beta-D- 30.3 23 0.00078 36.5 2.4 41 472-512 19-59 (323)
22 2j8m_A Acetyltransferase PA486 29.9 50 0.0017 28.2 4.3 57 426-510 88-146 (172)
23 1y9w_A Acetyltransferase; stru 28.9 41 0.0014 27.7 3.4 36 476-511 91-126 (140)
24 2g3a_A Acetyltransferase; stru 28.7 15 0.00051 30.7 0.6 35 477-511 104-138 (152)
25 3p04_A Uncharacterized BCR; SE 27.8 28 0.00097 29.4 2.2 20 136-155 14-33 (87)
26 1js3_A DDC;, DOPA decarboxylas 27.4 75 0.0026 32.8 5.8 48 279-326 221-269 (486)
27 1lh0_A OMP synthase; loop clos 26.5 1.1E+02 0.0039 28.7 6.5 76 260-339 117-195 (213)
28 1ghe_A Acetyltransferase; acyl 26.0 57 0.0019 27.1 3.8 57 426-511 96-154 (177)
29 3mjd_A Orotate phosphoribosylt 25.1 99 0.0034 30.1 5.8 66 273-338 145-214 (232)
30 2jlm_A Putative phosphinothric 25.0 68 0.0023 28.0 4.3 57 426-510 96-154 (182)
31 2jis_A Cysteine sulfinic acid 24.9 82 0.0028 33.0 5.6 47 280-326 246-293 (515)
32 1yr0_A AGR_C_1654P, phosphinot 24.1 66 0.0023 27.5 4.0 57 426-510 89-147 (175)
33 1tif_A IF3-N, translation init 24.1 56 0.0019 27.1 3.3 32 299-330 16-50 (78)
34 3k40_A Aromatic-L-amino-acid d 23.2 1.1E+02 0.0039 31.8 6.3 52 275-326 216-268 (475)
35 3jvn_A Acetyltransferase; alph 22.8 94 0.0032 25.6 4.6 35 475-509 115-151 (166)
36 1u6m_A Acetyltransferase, GNAT 22.6 51 0.0017 29.1 3.0 58 426-511 118-177 (199)
37 4e1o_A HDC, histidine decarbox 22.2 1E+02 0.0034 32.1 5.6 49 277-325 225-274 (481)
38 4fd5_A Arylalkylamine N-acetyl 22.0 62 0.0021 29.2 3.5 37 476-512 158-194 (222)
39 3i3g_A N-acetyltransferase; ma 21.7 57 0.0019 27.1 3.0 101 407-509 49-156 (161)
40 2fiw_A GCN5-related N-acetyltr 21.6 1E+02 0.0035 25.6 4.6 34 476-510 110-143 (172)
41 1tiq_A Protease synthase and s 21.2 68 0.0023 27.9 3.5 57 426-510 96-154 (180)
42 2wfu_B Probable insulin-like p 20.5 53 0.0018 22.0 1.9 17 405-421 5-21 (26)
No 1
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=100.00 E-value=5.3e-77 Score=585.66 Aligned_cols=208 Identities=47% Similarity=0.759 Sum_probs=201.4
Q ss_pred CCCCCCHHHHHHHHHcCCEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCceEEEecChhhhhhcCCccccccccC
Q 008469 134 TEGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKEN 213 (564)
Q Consensus 134 ~~~~~~Ve~AI~aLr~G~~VvV~DdedREnEgdLV~AAe~~T~e~iaFm~r~~~Glicvam~~e~~~rL~Lp~M~~~~~n 213 (564)
.+.|++||+||++||+|+||||+||+|||||||||+|||++||+.||||+||++|+||+||++++|++|+||+|+.. |
T Consensus 9 ~~~~~~ie~Ai~alr~G~~Viv~DdedREnEgDLi~aAe~~T~e~i~fm~r~~~GliC~~lt~e~~~~L~Lp~Mv~~--n 86 (233)
T 1k4i_A 9 KSNFDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTH--N 86 (233)
T ss_dssp ---CCCHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--C
T ss_pred CCchhHHHHHHHHHHCCCeEEEEeCCCCCcceeEEEEhhhCCHHHHHHHHHcCCCCEEEEcCHHHHhhCCCcccccc--c
Confidence 45699999999999999999999999999999999999999999999999999999999999999999999999987 8
Q ss_pred cccCCCceeEeeecCC-CCCcCCChhhHHHHHHHHHcCCCCCCCCCCCCccceeeeccCCcccccchhHHHHHHHHHcCC
Q 008469 214 DEKLCTAFTVTVDAKH-GTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGF 292 (564)
Q Consensus 214 ~~~~~taFtVsVDa~~-g~tTGISA~DRA~TIraLAd~~s~p~Df~rPGHVfPL~a~~gGvl~R~GhTEAAVdLarlAGl 292 (564)
++.++|+|||||||++ |++|||||.|||+||++|+++.++|+||+||||||||++++||||+|+|||||||||||||||
T Consensus 87 ~~~~~TaFTVsVda~~~g~tTGISA~DRa~Tir~la~~~~~p~df~rPGHvfPL~A~~GGVl~R~GHTEAaVDLarLAGl 166 (233)
T 1k4i_A 87 ADPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGK 166 (233)
T ss_dssp CCSSCCCBBCCEEECSTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTHHHHCCSHHHHHHHHHHHTTC
T ss_pred CCCCCCCeEEEEEcccCCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCccceeeecCCCeeccCChHHHHHHHHHHcCC
Confidence 8889999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEeCC-----------CCCcCChhHHHHHHHhcCCceEeehhHHHHHhhcccccc
Q 008469 293 DPAAVLCEVVDD-----------DGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVD 343 (564)
Q Consensus 293 ~PaaVicEiv~~-----------dG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~~e~lVe 343 (564)
.|++|||||+++ ||+|||++++++||++||||+++|+|||+||+++|++|+
T Consensus 167 ~PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iitI~dLi~yr~~~e~~v~ 228 (233)
T 1k4i_A 167 RPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTEGKLE 228 (233)
T ss_dssp CSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEEHHHHHHHHHHHHCCC-
T ss_pred CceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHhcCCeec
Confidence 999999999999 999999999999999999999999999999999999875
No 2
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=100.00 E-value=1.2e-76 Score=575.74 Aligned_cols=203 Identities=53% Similarity=0.847 Sum_probs=189.3
Q ss_pred CCCCCHHHHHHHHHcCCEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCceEEEecChhhhhhcCCccccccccCc
Q 008469 135 EGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKEND 214 (564)
Q Consensus 135 ~~~~~Ve~AI~aLr~G~~VvV~DdedREnEgdLV~AAe~~T~e~iaFm~r~~~Glicvam~~e~~~rL~Lp~M~~~~~n~ 214 (564)
+.|++|++||++||+|+||||+||+|||||||||+|||++|||.||||++|++|+||+||++++|++|+||+|+.. |+
T Consensus 2 ~~~~~ie~Ai~~lr~G~~Viv~DdedREnEgDli~aAe~~T~e~i~fm~~~~~GliC~~lt~~~a~~L~Lp~mv~~--n~ 79 (206)
T 3mio_A 2 TRLDSVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAV--NQ 79 (206)
T ss_dssp CCCCCHHHHHHHHHTTCCEEEESSSCTTCCCEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCSCCC------
T ss_pred CCchhHHHHHHHHHCCCeEEEEeCCCCccceeEEEEhHhCCHHHHHHHHHhCCCceEEECCHHHHhhCCCCccccc--CC
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999987 88
Q ss_pred ccCCCceeEeeecCCCCCcCCChhhHHHHHHHHHcCCCCCCCCCCCCccceeeeccCCcccccchhHHHHHHHHHcCCCc
Q 008469 215 EKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDP 294 (564)
Q Consensus 215 ~~~~taFtVsVDa~~g~tTGISA~DRA~TIraLAd~~s~p~Df~rPGHVfPL~a~~gGvl~R~GhTEAAVdLarlAGl~P 294 (564)
+.++|+|||||||++|++|||||.|||+||++|++|.++|+||+||||||||++++||||+|+|||||||||||||||.|
T Consensus 80 ~~~~taftvsvda~~g~tTGISA~DRa~Ti~~ladp~~~p~Df~rPGHvfPL~A~~gGvl~R~GhTEaavdLarlAGl~P 159 (206)
T 3mio_A 80 DKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQP 159 (206)
T ss_dssp -------CCCEEESSSCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTGGGTCCCHHHHHHHHHHHTTSCS
T ss_pred CCCCCCeEEEEecCCCCCCCcCHHHHHHHHHHHhCCCCCHHHhCCCCCceeEeeCCCCcccCCChHHHHHHHHHHcCCCc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEE--eCCCCCcCChhHHHHHHHhcCCceEeehhHHHHHhhcc
Q 008469 295 AAVLCEV--VDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRD 339 (564)
Q Consensus 295 aaVicEi--v~~dG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~~e 339 (564)
++||||| +++||+|||++++++||++|+||+|+|+|||+||+++|
T Consensus 160 a~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~iti~dli~yr~~~e 206 (206)
T 3mio_A 160 AGAICEIVSQKDEGSMAHTDELRVFADEHGLALITIADLIEWRRKHE 206 (206)
T ss_dssp BEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEEHHHHHHHHHHTC
T ss_pred eEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHhcC
Confidence 9999999 99999999999999999999999999999999998765
No 3
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=100.00 E-value=1.8e-76 Score=573.49 Aligned_cols=199 Identities=51% Similarity=0.832 Sum_probs=190.5
Q ss_pred CCCCHHHHHHHHHcCCEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCceEEEecChhhhhhcCCccccccccCcc
Q 008469 136 GFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDE 215 (564)
Q Consensus 136 ~~~~Ve~AI~aLr~G~~VvV~DdedREnEgdLV~AAe~~T~e~iaFm~r~~~Glicvam~~e~~~rL~Lp~M~~~~~n~~ 215 (564)
.|++||+||++||+|+||||+||||||||||||+|||++|||.||||++|++|+||+||++++|++|+||+|+.. |++
T Consensus 4 ~~~~ie~Ai~~lr~G~~Viv~DdedREnEgDli~aAe~~T~e~i~fm~~~~~GliC~~lt~~~~~~L~Lp~mv~~--n~~ 81 (204)
T 1tks_A 4 IFTPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSEERANQLELPPMLAN--RSD 81 (204)
T ss_dssp CSCCHHHHHHHHHTTCCEEEESSSCTTCBCEEEEEGGGCCHHHHHHHHHTBCSCCEEEEEHHHHHHTTCCBSCC------
T ss_pred chhhHHHHHHHHHCCCeEEEEeCCCCCCCEEEEEEhhhCCHHHHHHHHHhCCCcEEEEcCHHHHhhCCCchhccc--cCC
Confidence 488999999999999999999999999999999999999999999999999999999999999999999999987 888
Q ss_pred cCCCceeEeeecCCCCCcCCChhhHHHHHHHHHcCCCCCCCCCCCCccceeeeccCCcccccchhHHHHHHHHHcCCCce
Q 008469 216 KLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPA 295 (564)
Q Consensus 216 ~~~taFtVsVDa~~g~tTGISA~DRA~TIraLAd~~s~p~Df~rPGHVfPL~a~~gGvl~R~GhTEAAVdLarlAGl~Pa 295 (564)
.++|+|||||||++|++|||||.|||+||++|+++.++|+||+||||||||++++||||+|+|||||||||||||||.|+
T Consensus 82 ~~~taFtVsVda~~g~tTGISA~DRa~Ti~~l~~~~~~p~df~rPGHvfPL~A~~gGvl~R~GHTEAavdLarLAGl~Pa 161 (204)
T 1tks_A 82 RHGTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSKPQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPA 161 (204)
T ss_dssp --CCCBBCCEEESTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEEECTTGGGTCCCHHHHHHHHHHHTTSCSB
T ss_pred CCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCCcceeeecCCCCccCCCcHHHHHHHHHHcCCCce
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEe-CCCCCcCChhHHHHHHHhcCCceEeehhHHHHHh
Q 008469 296 AVLCEVV-DDDGSMARLPKLREFAKRENLKIISIADLIRYRR 336 (564)
Q Consensus 296 aVicEiv-~~dG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~ 336 (564)
+|||||+ ++||+|||++++++||++||||+++|+|||+||+
T Consensus 162 ~vicEi~~~~dG~mar~~~l~~fA~~h~l~iiti~dLi~yr~ 203 (204)
T 1tks_A 162 GVICELVRDEDGLMMRLDDCIQFGKKHGIKIININQLVEYIS 203 (204)
T ss_dssp EEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEEHHHHHHHHC
T ss_pred EEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHh
Confidence 9999999 8899999999999999999999999999999985
No 4
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=100.00 E-value=1.3e-75 Score=575.25 Aligned_cols=198 Identities=31% Similarity=0.568 Sum_probs=189.6
Q ss_pred CCCHHHHHHHHHcCCEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCceEEEecChhhhhhcCCccccccccCcc-
Q 008469 137 FSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDE- 215 (564)
Q Consensus 137 ~~~Ve~AI~aLr~G~~VvV~DdedREnEgdLV~AAe~~T~e~iaFm~r~~~Glicvam~~e~~~rL~Lp~M~~~~~n~~- 215 (564)
|++|++||++||+|+||||+||||||||||||+|||++|||.||||++|++|+||+||++++|++|+||+|+.. |++
T Consensus 1 ~~~ie~Ai~alr~G~~Viv~DdedREnEgDli~aAe~~Tpe~i~fm~~~~~GliC~~l~~e~~~~L~Lp~Mv~~--n~~~ 78 (227)
T 1snn_A 1 MNNVEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDI--LEFA 78 (227)
T ss_dssp -CHHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHTEEEEEEEECHHHHHHHTCCCHHHH--HHHH
T ss_pred CchHHHHHHHHHCCCeEEEEeCCCCCCceeEEEEhhhCCHHHHHHHHHcCCCcEEEEcCHHHHhhCCChhhhhh--hccc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999976 432
Q ss_pred ---------------c--CCCceeEeeecCCCCCcCCChhhHHHHHHHHHc------CCCCCCCCCCCCccceeeeccCC
Q 008469 216 ---------------K--LCTAFTVTVDAKHGTTTGVSARDRATTVLTLAS------RDSKPGDFNRPGHIFPLKYREGG 272 (564)
Q Consensus 216 ---------------~--~~taFtVsVDa~~g~tTGISA~DRA~TIraLAd------~~s~p~Df~rPGHVfPL~a~~gG 272 (564)
. ++|+|||||||+ +++|||||.|||+||++|++ +.++|+||+||||||||+|++||
T Consensus 79 ~~~~~~~~~l~~~~~~Y~~~TaFtvsVd~~-~~tTGISA~DRa~Tir~la~~~~~~~~~~~~~df~rPGHVfPL~A~~gG 157 (227)
T 1snn_A 79 SQKFKVLRELYPNDIPYDEKSSFSITINHR-KTFTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGL 157 (227)
T ss_dssp TTTCHHHHHTCCTTCTTSSSCCEEEEEEET-TCSSSCSHHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEEEEECCTTG
T ss_pred cccccccccccccccccCCCCCcEEEEEcC-CCCCCCCHHHHHHHHHHHHhhhcccCCCCCHHHcCCCCCceeEEeCCCC
Confidence 2 889999999998 49999999999999999999 99999999999999999999999
Q ss_pred cccccchhHHHHHHHHHcCCCceEEEEEEeCCCCCcCChhHHHHHHHhcCCceEeehhHHHHHhh
Q 008469 273 VLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRK 337 (564)
Q Consensus 273 vl~R~GhTEAAVdLarlAGl~PaaVicEiv~~dG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~ 337 (564)
|++|+|||||||||||||||.|++||||||++||+|||++++++||++||||+|+|+|||+||++
T Consensus 158 Vl~R~GHTEaaVdLarlAGl~Pa~VicEi~~ddG~mar~~~l~~fA~~h~l~~iti~dLi~yr~~ 222 (227)
T 1snn_A 158 VKNRQGHTEMTVALAELANLVPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLSGEEIINYYLD 222 (227)
T ss_dssp GGTCCSHHHHHHHHHHHTTSCSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEEHHHHHHHC--
T ss_pred EeeCCCchHHHHHHHHHcCCCceEEEEEEeCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999976
No 5
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=100.00 E-value=2.9e-73 Score=556.46 Aligned_cols=203 Identities=50% Similarity=0.890 Sum_probs=194.0
Q ss_pred CCCHHHHHHHHHcCCEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCceEEEecChhhhhhcCCccccccccCccc
Q 008469 137 FSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEK 216 (564)
Q Consensus 137 ~~~Ve~AI~aLr~G~~VvV~DdedREnEgdLV~AAe~~T~e~iaFm~r~~~Glicvam~~e~~~rL~Lp~M~~~~~n~~~ 216 (564)
+++|++||++||+|+||||+||+|||||||||+|||++||+.||||++|++|+||+||++++|++|+||+|+.. |++.
T Consensus 13 ~~~ie~Ai~~lr~G~~Viv~DdedREnEgdli~aAe~~T~e~i~fm~~~~~GliCl~lt~~ra~~L~Lp~mv~~--n~~~ 90 (217)
T 1g57_A 13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSA 90 (217)
T ss_dssp HHHHHHHHHHHHTTCCEEEEC----CCCEEEEEETTTCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--CCCT
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCCcCEEEEEEhhhCCHHHHHHHHHhCCCceEEECCHHHHhhCCCcccccc--CCCc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999987 8888
Q ss_pred CCCceeEeeecCCCCCcCCChhhHHHHHHHHHcCCCCCCCCCCCCccceeeeccCCcccccchhHHHHHHHHHcCCCceE
Q 008469 217 LCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAA 296 (564)
Q Consensus 217 ~~taFtVsVDa~~g~tTGISA~DRA~TIraLAd~~s~p~Df~rPGHVfPL~a~~gGvl~R~GhTEAAVdLarlAGl~Paa 296 (564)
++|+||||||+++|++|||||.||+.||++|++|.++|+||++|||||||++++|||++|+|||||||||||||||.||+
T Consensus 91 ~~taftVsvda~~g~tTGISa~DRa~Ti~~lad~~~~~~Df~~PGHvfPL~A~~gGvl~R~GhTEAavdLarLAGl~Pa~ 170 (217)
T 1g57_A 91 YGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAG 170 (217)
T ss_dssp TCCCBBSCEEESSSCSSSCSHHHHHHHHHHHHSTTCCGGGEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSCE
T ss_pred CCCceEEeeccccCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCCccceeecCCCcccCCCcHHHHHHHHHHcCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCcCChhHHHHHHHhcCCceEeehhHHHHHhhcccc
Q 008469 297 VLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKL 341 (564)
Q Consensus 297 VicEiv~~dG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~~e~l 341 (564)
|||||+++||+|+|.+++.+||++|+||+|+|+|||+||+++|+.
T Consensus 171 vicEi~~~dG~mar~~~l~~fA~~h~l~~iti~dLi~yr~~~e~~ 215 (217)
T 1g57_A 171 VLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERK 215 (217)
T ss_dssp EEEEBBCTTSSBCCHHHHHHHHHHTTCEEEEHHHHHHHHHHHC--
T ss_pred EEEEEeCCCCCccCHHHHHHHHHHcCCCEEEHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999999998864
No 6
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=100.00 E-value=3.2e-72 Score=542.93 Aligned_cols=194 Identities=48% Similarity=0.819 Sum_probs=169.6
Q ss_pred cccccccccccCCCCcEEEEEEEecCCCceEEEEEeccCCCCCceeEEeccCCcccccccCCCCCChHHHHHHHHHHHHh
Q 008469 341 LVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAA 420 (564)
Q Consensus 341 lVer~~~~~lpT~~G~F~~~~Yr~~~dg~EHlALV~Gdi~~~~~vLVRVHSeCltgDvfgS~rCDCg~QL~~AL~~Ia~~ 420 (564)
.|+++++++|||.||+|++++|++..++.||+|||+|++.+++||||||||+|+|||+|||.+|||+|||+.||++|+++
T Consensus 2 ~V~~v~~~~lpT~~G~f~~~~y~~~~~~~eH~ALv~G~i~~~~~vLVRvHsec~tgDvfgs~rcdcg~qL~~Al~~I~~~ 81 (196)
T 2bz1_A 2 QLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEE 81 (196)
T ss_dssp CEEEEEEEEEEETTEEEEEEEEEETTTCCEEEEEEESCCCSSSCEEEEEEECCHHHHTSCCSSCSHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEecCCCeeEEEEEEEECCCCcEEEEEEeCCCCCCCccEEEEeccCChHHHhCCCCCCChHHHHHHHHHHHHh
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCCceecccCCCCccccccc
Q 008469 421 GRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKG 500 (564)
Q Consensus 421 G~GVlVYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~~IrLLTNNP~K~~aL~g 500 (564)
|+||||||| ||||||||.+|++||.||++|+||++||.++|++.|+|+||+|||||++|||++||||||||.|+.+|++
T Consensus 82 G~GVlvyLr-qegrgigL~~kl~ay~lqd~g~dt~~an~~lg~~~d~R~ygigAqIL~dLGV~~irLLTnnp~K~~~L~g 160 (196)
T 2bz1_A 82 GRGILLYHR-QEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE 160 (196)
T ss_dssp TSEEEEEEC-CHHHHTCHHHHHHHHHHHHTTCCHHHHHHHTTCCSCCCCTHHHHHHHHHTTCCSEEEECSCHHHHHHHHH
T ss_pred CCEEEEEEC-CCCcchhHHHHHHHHhhhccCCcccccccccCCCCccccHHHHHHHHHHcCCCcEEccCCCCcccccccc
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEeeccCCCChhhHHHHHHHHHhcCCCCC
Q 008469 501 YGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYG 535 (564)
Q Consensus 501 ~GIeV~ervpl~~~~~~~n~~YL~tK~~k~gH~l~ 535 (564)
|||+|++|+|+..++|++|++||+||++||||+++
T Consensus 161 ~GleVve~v~~~~~~~~~n~~yl~tk~~~~gh~l~ 195 (196)
T 2bz1_A 161 AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLN 195 (196)
T ss_dssp TTCCEEEEECCCC----------------------
T ss_pred CCeEEEEEEccCCCCCccchhHHHhhHHhhCCCCC
Confidence 99999999999999999999999999999999984
No 7
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A
Probab=43.84 E-value=12 Score=39.46 Aligned_cols=88 Identities=23% Similarity=0.394 Sum_probs=56.4
Q ss_pred EEEEecCCCceEEEEEeccCCCCCce---eE--EeccCCcccccccCCCCCChHHHHHHHHHHHHhCCEEEEEEeCCCCC
Q 008469 360 YCYRSILDGIEHIAMVKGDIGDGQDI---LV--RVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGR 434 (564)
Q Consensus 360 ~~Yr~~~dg~EHlALV~Gdi~~~~~v---LV--RVHSeCltgDvfgS~rCDCg~QL~~AL~~Ia~~G~GVlVYLr~qEGR 434 (564)
+.|+........++||.|-=..-+|. .| =+=+.+..||||-|-. ..|.-.|++.+. .|.|||+..-|-.
T Consensus 44 vv~r~~~~~~~KValiSGGGSGHEPah~GfVG~GMLdaAv~G~VFaSPs---~~qi~~ai~av~-~g~GvL~ivkNYt-- 117 (366)
T 1oi2_A 44 YVTRADAPVAGKVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPT---PDKIFECAMQVD-GGEGVLLIIKNYT-- 117 (366)
T ss_dssp EEEETTCSCTTSCEEEEEEEESSTTTTGGGBSBTSBSEEEEEEETSCCC---HHHHHHHHHHHC-CSSCEEEEEESSH--
T ss_pred EEEeCCCCCCCcEEEEecCCccccccccccccCCccceeeecccCCCCC---HHHHHHHHHhhc-CCCCEEEEeCCcH--
Confidence 34444332124578887642222231 00 0234467799998875 689999998874 5679998876322
Q ss_pred CcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCC
Q 008469 435 GIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVR 483 (564)
Q Consensus 435 GiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~ 483 (564)
.|--+|++|+++++.-||+
T Consensus 118 ------------------------------GDvlNF~mA~E~a~~eGi~ 136 (366)
T 1oi2_A 118 ------------------------------GDILNFETATELLHDSGVK 136 (366)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHTTCC
T ss_pred ------------------------------HHhhcHHHHHHHHHhcCCc
Confidence 3556799999999999987
No 8
>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti}
Probab=42.50 E-value=20 Score=31.47 Aligned_cols=37 Identities=11% Similarity=0.107 Sum_probs=30.0
Q ss_pred HHHHcCCCceecccCCCCcccccccCCcEEEEEeecc
Q 008469 476 MLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLI 512 (564)
Q Consensus 476 ILrdLGV~~IrLLTNNP~K~~aL~g~GIeV~ervpl~ 512 (564)
..+..|++.+.+.+.|+.-+.-.+.+|.+.++.++..
T Consensus 154 ~a~~~g~~~i~~~~~n~~a~~~Y~k~GF~~~~~~~~~ 190 (217)
T 4fd4_A 154 LSKKLGFKAISGDFTSVFSVKLAEKLGMECISQLALG 190 (217)
T ss_dssp HHHHHTCSEEEEEECSHHHHHHHHHTTCEEEEEEEGG
T ss_pred HHHHcCCCEEEEEeCCHHHHHHHHHCCCeEEEeEeHH
Confidence 4567899999998778766666789999999998854
No 9
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A
Probab=38.96 E-value=17 Score=37.82 Aligned_cols=58 Identities=22% Similarity=0.496 Sum_probs=45.2
Q ss_pred cCCcccccccCCCCCChHHHHHHHHHHHHhCCEEEEEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcCh
Q 008469 391 SECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREY 470 (564)
Q Consensus 391 SeCltgDvfgS~rCDCg~QL~~AL~~Ia~~G~GVlVYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdY 470 (564)
..|..||||-|-. ..|.-.|++.+. .|.|||+..-|- ..|--+|
T Consensus 68 dAAv~G~VFaSPs---~~qi~~aikav~-~g~GvL~ivkNY--------------------------------tGDvlNF 111 (336)
T 2iu4_A 68 AAAVTGPLFIPPK---SKNILKAIRQVN-SGKGVFVIIKNF--------------------------------EADLKEF 111 (336)
T ss_dssp SEEEEEEETSCCC---HHHHHHHHHHHC-SSSCEEEEEESC--------------------------------HHHHHHH
T ss_pred ceeeecccCCCCC---HHHHHHHHHhhc-CCCCEEEEeCCc--------------------------------HHHhhcH
Confidence 4467799998875 689999998875 467998877532 2356789
Q ss_pred hHHHHHHHHcCCCc
Q 008469 471 GIGAQMLRDLGVRT 484 (564)
Q Consensus 471 gigAQILrdLGV~~ 484 (564)
++|+++++.-|++-
T Consensus 112 ~mAaE~a~~eGi~v 125 (336)
T 2iu4_A 112 NEAIKEARTEGIDV 125 (336)
T ss_dssp HHHHHHHHHTTCCE
T ss_pred HHHHHHHHhCCCcE
Confidence 99999999999973
No 10
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=38.87 E-value=76 Score=31.14 Aligned_cols=76 Identities=21% Similarity=0.303 Sum_probs=51.3
Q ss_pred CCccceeeeccCCcccccchhHHHHHHHHHcCCCceEEEEEEeCCCCCcCChhHHHHHHHhcCCceE---eehhHHHHHh
Q 008469 260 PGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKII---SIADLIRYRR 336 (564)
Q Consensus 260 PGHVfPL~a~~gGvl~R~GhTEAAVdLarlAGl~PaaVicEiv~~dG~mar~~~l~~fA~~h~L~iv---si~DLi~yr~ 336 (564)
|| ..|...+ ++.--+-..+++++.+-+|...++++|-+=-.+|.-......+++.++.|+|+. +++||++|..
T Consensus 142 ~G--~VliVDD--vitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~egG~~~l~a~~~~~~~~Gv~v~SL~~~~~l~~~~~ 217 (238)
T 3n2l_A 142 EG--RVMLVDD--VITAGTAIRESMELIQANKADLAGVLVAIDRQEKGKGELSAIQEVERDFGCAVISIVSLTDLITYLE 217 (238)
T ss_dssp CS--EEEEECS--CCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCCBCSSSSBHHHHHHHHHCCEEEEEEEHHHHHHHHH
T ss_pred CC--cEEEEee--eecccHHHHHHHHHHHHcCCEEEEEEEEEEcccCccchhhHHHHHHHHcCCCEEEEEEHHHHHHHHH
Confidence 78 3444433 544445567899999999998888777553333332335567788788999955 5678888886
Q ss_pred hcc
Q 008469 337 KRD 339 (564)
Q Consensus 337 ~~e 339 (564)
++.
T Consensus 218 ~~~ 220 (238)
T 3n2l_A 218 QQG 220 (238)
T ss_dssp SSC
T ss_pred HcC
Confidence 654
No 11
>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}
Probab=38.85 E-value=23 Score=30.79 Aligned_cols=58 Identities=22% Similarity=0.300 Sum_probs=40.0
Q ss_pred EEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCCceecc---cCCCCcccccccCC
Q 008469 426 VYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLM---TNNPSKYVGLKGYG 502 (564)
Q Consensus 426 VYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~~IrLL---TNNP~K~~aL~g~G 502 (564)
+|+. ++-||.|+..+|-.. ..+..+.+|++++.|. .+|+.-+.-.+..|
T Consensus 94 ~~V~-p~~rg~GiG~~Ll~~---------------------------~~~~a~~~g~~~~~l~~~~~~N~~A~~~y~k~G 145 (173)
T 4h89_A 94 FMVA-AAARGRGVGRALCQD---------------------------MIDWAGREGFRAIQFNAVVETNTVAVKLWQSLG 145 (173)
T ss_dssp EEEC-GGGTTSSHHHHHHHH---------------------------HHHHHHHTTCSEEEEEEEETTCHHHHHHHHHTT
T ss_pred eEEE-EeeccchHHHHHHHH---------------------------HHHHHHHCCCcEEEEeeecccCHHHHHHHHHCC
Confidence 5665 777777777766432 2234678899998763 45665555567899
Q ss_pred cEEEEEeec
Q 008469 503 LAVAGRVPL 511 (564)
Q Consensus 503 IeV~ervpl 511 (564)
.++++++|-
T Consensus 146 F~~~G~~~~ 154 (173)
T 4h89_A 146 FRVIGTVPE 154 (173)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEcc
Confidence 999998873
No 12
>1y0n_A Hypothetical UPF0270 protein PA3463; MCSG, midwest center for structural genomics, protein struct initiative, PSI, structural genomics; 2.00A {Pseudomonas aeruginosa} SCOP: d.291.1.1
Probab=38.77 E-value=24 Score=29.44 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=23.9
Q ss_pred CHHHHHHHHHcCCEEEEEeCCCCCCcccEEEEcCC
Q 008469 139 SIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQL 173 (564)
Q Consensus 139 ~Ve~AI~aLr~G~~VvV~DdedREnEgdLV~AAe~ 173 (564)
.|++...+|++|+.||++|.. .|.-=+++.+.
T Consensus 39 kv~qv~~qL~~GeavIvfse~---~Esv~I~~k~~ 70 (78)
T 1y0n_A 39 RVERARHALRRGEAVILFDPE---SQQCQLMLRSE 70 (78)
T ss_dssp HHHHHHHHHHTTSEEEEECTT---TCCEEEEEGGG
T ss_pred HHHHHHHHHHcCCEEEEECCC---CCeEeeeEHHH
Confidence 688999999999999999764 34444555443
No 13
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=37.43 E-value=24 Score=29.05 Aligned_cols=40 Identities=10% Similarity=0.012 Sum_probs=29.1
Q ss_pred HHHHHcCCCceeccc--CCCCcccccccCCcEEEEEeeccCC
Q 008469 475 QMLRDLGVRTMKLMT--NNPSKYVGLKGYGLAVAGRVPLITP 514 (564)
Q Consensus 475 QILrdLGV~~IrLLT--NNP~K~~aL~g~GIeV~ervpl~~~ 514 (564)
+.++..|+++|.|.+ +|+.-....+.+|.+.+++++....
T Consensus 115 ~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~~~ 156 (164)
T 4e0a_A 115 SYGKAHQVDAIELDVYDFNDRAKAFYHSLGMRCQKQTMELPL 156 (164)
T ss_dssp HHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred HHHHHcCCCEEEEEEEcCCHHHHHHHHHcCCEEeceeccCCc
Confidence 346678999988875 5555556678899999888886543
No 14
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp}
Probab=37.35 E-value=19 Score=37.48 Aligned_cols=88 Identities=22% Similarity=0.306 Sum_probs=58.1
Q ss_pred EEEEecCCCceEEEEEeccCCCCCce---eEE--eccCCcccccccCCCCCChHHHHHHHHHHHHhCCEEEEEEeCCCCC
Q 008469 360 YCYRSILDGIEHIAMVKGDIGDGQDI---LVR--VHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGR 434 (564)
Q Consensus 360 ~~Yr~~~dg~EHlALV~Gdi~~~~~v---LVR--VHSeCltgDvfgS~rCDCg~QL~~AL~~Ia~~G~GVlVYLr~qEGR 434 (564)
+.||.... ...++||.|-=..-+|. .|= +=..|..||||-|-. ..|.-.|++.+. .|.|||+..-|-.
T Consensus 37 vv~r~~~~-~~KValISGGGSGHEPahaGfVG~GMLdAAv~G~VFaSPs---~~qi~~aikav~-~g~GvL~ivkNYt-- 109 (332)
T 3ct4_A 37 IIQRKSPK-SGKVALVSGGGSGHEPAHAGFVGEGMLSAAVCGAIFTSPT---PDQIYEAIKSAD-EGAGVLLIIKNYL-- 109 (332)
T ss_dssp EEEECSCC-CSCCEEEEEEEESSTTTTGGGBSBTSBSEEEEEEETCCCC---HHHHHHHHHHHC-CSSCEEEEEESCH--
T ss_pred EEEeCCCC-CCcEEEEecCCccccccccccccCCccceeeecccCCCCC---HHHHHHHHHhhc-CCCCEEEEeCCcH--
Confidence 44554433 35688887642222331 000 224467799998875 689999998875 4679988775322
Q ss_pred CcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCCc
Q 008469 435 GIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRT 484 (564)
Q Consensus 435 GiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~~ 484 (564)
.|--+|++++++++.-|++-
T Consensus 110 ------------------------------GDvlNF~mAaE~a~~eGi~v 129 (332)
T 3ct4_A 110 ------------------------------GDVMNFEMAREMAEMEEIKV 129 (332)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHTTCCE
T ss_pred ------------------------------HHhhcHHHHHHHHHhcCCcE
Confidence 35668999999999999973
No 15
>3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1}
Probab=36.06 E-value=29 Score=29.89 Aligned_cols=58 Identities=19% Similarity=0.128 Sum_probs=41.8
Q ss_pred EEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCCceecccCCCCcccccccCCcEE
Q 008469 426 VYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAV 505 (564)
Q Consensus 426 VYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~~IrLLTNNP~K~~aL~g~GIeV 505 (564)
+++. ++-||.|+..+|-.+ ..+..+..|+.++.|.++|+.-....+..|.+.
T Consensus 113 l~V~-p~~rg~Gig~~Ll~~---------------------------~~~~a~~~g~~~i~l~~~n~~a~~~y~k~GF~~ 164 (197)
T 3qb8_A 113 FAIG-SEVTGKGLATKLLKK---------------------------TIEESSSHGFKYIYGDCTNIISQNMFEKHGFET 164 (197)
T ss_dssp EEEE-ESSCSSSHHHHHHHH---------------------------HHHHHHHTTCCEEEEEECSHHHHHHHHHTTCEE
T ss_pred EEEC-HHHcCCCHHHHHHHH---------------------------HHHHHHHcCCCEEEEEcCCHHHHHHHHHCCCeE
Confidence 5565 677777777766432 233456789999999887776666678899999
Q ss_pred EEEeec
Q 008469 506 AGRVPL 511 (564)
Q Consensus 506 ~ervpl 511 (564)
++.++.
T Consensus 165 ~~~~~~ 170 (197)
T 3qb8_A 165 VGSVKY 170 (197)
T ss_dssp EEEEES
T ss_pred EEEEEE
Confidence 888773
No 16
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3
Probab=35.66 E-value=17 Score=37.16 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCceecccCCCCcccccccCCcEEEEEeec
Q 008469 472 IGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 511 (564)
Q Consensus 472 igAQILrdLGV~~IrLLTNNP~K~~aL~g~GIeV~ervpl 511 (564)
-..++|+.+|+++|||.+.+|.=+.++++.||+|.--||.
T Consensus 17 ~vv~llk~~~i~~vRlY~~d~~vl~A~~~tgi~v~lgv~n 56 (312)
T 2cyg_A 17 EVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPR 56 (312)
T ss_dssp HHHHHHHHTTCCEEEESSCCHHHHHHHTTSCCEEEEEECH
T ss_pred HHHHHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEeccc
Confidence 3378999999999999999998899999999999877774
No 17
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A
Probab=34.44 E-value=17 Score=37.08 Aligned_cols=41 Identities=22% Similarity=0.403 Sum_probs=36.0
Q ss_pred hHHHHHHHHcCCCceecccCCCCcccccccCCcEEEEEeec
Q 008469 471 GIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 511 (564)
Q Consensus 471 gigAQILrdLGV~~IrLLTNNP~K~~aL~g~GIeV~ervpl 511 (564)
.-.+|+|+..|+++|||.+-+|.-+.+|++.||+|.--||.
T Consensus 16 ~~vv~llk~~~i~~VRlY~~d~~vL~A~~~tgi~v~lgv~n 56 (306)
T 1aq0_A 16 STVVSMFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPN 56 (306)
T ss_dssp HHHHHHHHHHTCCEEEESSCCHHHHHHHTTSCCEEEEEECG
T ss_pred HHHHHHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEeccc
Confidence 35578999999999999998898899999999999877774
No 18
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3
Probab=34.18 E-value=17 Score=37.01 Aligned_cols=40 Identities=15% Similarity=0.230 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCceecccCCCCcccccccCCcEEEEEeec
Q 008469 472 IGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 511 (564)
Q Consensus 472 igAQILrdLGV~~IrLLTNNP~K~~aL~g~GIeV~ervpl 511 (564)
-.+|+|+..|+++|||.+.+|.=+.++++.||+|.--||.
T Consensus 17 ~vv~llk~~~i~~vRlY~~d~~vL~A~~~tgi~v~lgv~n 56 (306)
T 1ghs_A 17 DVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGN 56 (306)
T ss_dssp HHHHHHHHHTCCEEEESSCCHHHHHHTTTSCCEEEEECCG
T ss_pred HHHHHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEeccc
Confidence 4568999999999999998898899999999999877774
No 19
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*
Probab=33.93 E-value=20 Score=36.90 Aligned_cols=40 Identities=15% Similarity=0.239 Sum_probs=35.9
Q ss_pred HHHHHHHHcCCCceecccCCCCcccccccCCcEEEEEeec
Q 008469 472 IGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 511 (564)
Q Consensus 472 igAQILrdLGV~~IrLLTNNP~K~~aL~g~GIeV~ervpl 511 (564)
..+++||..||++|||..-+|.=+.+|++.||+|.=-||-
T Consensus 18 ~vv~llks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n 57 (316)
T 3em5_A 18 EVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPN 57 (316)
T ss_dssp HHHHHHHHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECG
T ss_pred HHHHHHHHcCCCEEEEecCCHHHHHHhhcCCceEEEeccc
Confidence 5788999999999999998998899999999999877773
No 20
>3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl COA, N-acetyltransferase domain; HET: ACO; 1.46A {Drosophila melanogaster} PDB: 3v8i_A*
Probab=30.84 E-value=29 Score=31.33 Aligned_cols=38 Identities=11% Similarity=0.226 Sum_probs=29.6
Q ss_pred HHHHHcCCCceecccCCCCcccccccCCcEEEEEeecc
Q 008469 475 QMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLI 512 (564)
Q Consensus 475 QILrdLGV~~IrLLTNNP~K~~aL~g~GIeV~ervpl~ 512 (564)
+.++..|++.+.+.+.|+.-..-.+.+|.++++.++..
T Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~y~~~Gf~~~~~~~~~ 189 (215)
T 3te4_A 152 EYMRENGINVYHVLCSSHYSARVMEKLGFHEVFRMQFA 189 (215)
T ss_dssp HHHHHHTCCEEEEEESSHHHHHHHHHTTCEEEEEECGG
T ss_pred HHHHHcCCCEEEEEecCHHHHHHHHHCCCEEEEEEEhh
Confidence 34667899999888877765566788999999888753
No 21
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A
Probab=30.34 E-value=23 Score=36.48 Aligned_cols=41 Identities=15% Similarity=0.239 Sum_probs=36.1
Q ss_pred HHHHHHHHcCCCceecccCCCCcccccccCCcEEEEEeecc
Q 008469 472 IGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLI 512 (564)
Q Consensus 472 igAQILrdLGV~~IrLLTNNP~K~~aL~g~GIeV~ervpl~ 512 (564)
-.+|+|+..|+++|||..-+|.=+.++++.||+|.=-||..
T Consensus 19 ~Vv~llks~gi~~VRlY~~D~~vL~Al~~sgi~V~lGV~n~ 59 (323)
T 3ur8_A 19 DVIKLYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQ 59 (323)
T ss_dssp HHHHHHHHTTCCEEEESSCCHHHHHHHTTCCCEEEEEECGG
T ss_pred HHHHHHHhCCCCeEEecCCCHHHHHHHHhcCCeEEEecccc
Confidence 46788999999999999988888999999999998878853
No 22
>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A
Probab=29.92 E-value=50 Score=28.17 Aligned_cols=57 Identities=28% Similarity=0.456 Sum_probs=37.6
Q ss_pred EEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCCceeccc--CCCCcccccccCCc
Q 008469 426 VYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMT--NNPSKYVGLKGYGL 503 (564)
Q Consensus 426 VYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~~IrLLT--NNP~K~~aL~g~GI 503 (564)
+|+. .+-||.|+..+|-.. ..+..+.+|+++|.|.+ .|+.-+.-.+..|.
T Consensus 88 ~~V~-p~~rg~Gig~~ll~~---------------------------~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF 139 (172)
T 2j8m_A 88 VYVR-DDQRGKGLGVQLLQA---------------------------LIERARAQGLHVMVAAIESGNAASIGLHRRLGF 139 (172)
T ss_dssp EEEC-TTCTTSSHHHHHHHH---------------------------HHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred EEEC-hhhcCCCHHHHHHHH---------------------------HHHHHHHCCccEEEEEEcCCCHHHHHHHHHCCC
Confidence 6776 777888887766432 22345678888888753 45544555677888
Q ss_pred EEEEEee
Q 008469 504 AVAGRVP 510 (564)
Q Consensus 504 eV~ervp 510 (564)
+..+..+
T Consensus 140 ~~~g~~~ 146 (172)
T 2j8m_A 140 EISGQMP 146 (172)
T ss_dssp EEEEEEE
T ss_pred EEEeecc
Confidence 8777655
No 23
>1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1
Probab=28.89 E-value=41 Score=27.68 Aligned_cols=36 Identities=19% Similarity=0.062 Sum_probs=27.4
Q ss_pred HHHHcCCCceecccCCCCcccccccCCcEEEEEeec
Q 008469 476 MLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 511 (564)
Q Consensus 476 ILrdLGV~~IrLLTNNP~K~~aL~g~GIeV~ervpl 511 (564)
.++..|++.+.|.++|+.-..-.+..|.+.++..+.
T Consensus 91 ~~~~~g~~~i~~~~~n~~a~~~y~~~Gf~~~~~~~~ 126 (140)
T 1y9w_A 91 IAKEKGCRLILLDSFSFQAPEFYKKHGYREYGVVED 126 (140)
T ss_dssp HHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEEESS
T ss_pred HHHHcCCCEEEEEcCCHhHHHHHHHCCCEEEEEEcC
Confidence 356689999999886665555567889998888764
No 24
>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=28.69 E-value=15 Score=30.74 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=25.7
Q ss_pred HHHcCCCceecccCCCCcccccccCCcEEEEEeec
Q 008469 477 LRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 511 (564)
Q Consensus 477 LrdLGV~~IrLLTNNP~K~~aL~g~GIeV~ervpl 511 (564)
++..|++++.|.+.|+.-..-.+.+|.+..+..+.
T Consensus 104 ~~~~g~~~i~l~~~n~~a~~~y~k~GF~~~~~~~~ 138 (152)
T 2g3a_A 104 ARKRGCMGAYIDTMNPDALRTYERYGFTKIGSLGP 138 (152)
T ss_dssp HHHTTCCEEEEEESCHHHHHHHHHHTCEEEEEECC
T ss_pred HHHCCCCEEEEEecCccHHHHHHHCCCEEeeeccC
Confidence 55678888888887665566667788888777653
No 25
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=27.79 E-value=28 Score=29.39 Aligned_cols=20 Identities=25% Similarity=0.287 Sum_probs=18.6
Q ss_pred CCCCHHHHHHHHHcCCEEEE
Q 008469 136 GFSSIPEAIEDIRQGKFVVV 155 (564)
Q Consensus 136 ~~~~Ve~AI~aLr~G~~VvV 155 (564)
.|+..+++.+.||+|++|||
T Consensus 14 sy~Da~~I~d~Lr~~~~Vvv 33 (87)
T 3p04_A 14 SFEDAQVIGGAFRDGDAVVF 33 (87)
T ss_dssp SGGGHHHHHHHHHTTCCEEE
T ss_pred cHHHHHHHHHHHHCCCEEEE
Confidence 67889999999999999999
No 26
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=27.43 E-value=75 Score=32.76 Aligned_cols=48 Identities=15% Similarity=0.173 Sum_probs=38.0
Q ss_pred hhHHHHHHHHHcCCCceEEEEEEe-CCCCCcCChhHHHHHHHhcCCceE
Q 008469 279 HTEASVDLAVLAGFDPAAVLCEVV-DDDGSMARLPKLREFAKRENLKII 326 (564)
Q Consensus 279 hTEAAVdLarlAGl~PaaVicEiv-~~dG~mar~~~l~~fA~~h~L~iv 326 (564)
.-|.+++=...+|..|.+|++... +..|...+.+++.++|++||+.++
T Consensus 221 ~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lh 269 (486)
T 1js3_A 221 ALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLH 269 (486)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEE
Confidence 455666655668899987777665 467999999999999999999864
No 27
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=26.49 E-value=1.1e+02 Score=28.73 Aligned_cols=76 Identities=18% Similarity=0.323 Sum_probs=48.5
Q ss_pred CCccceeeeccCCcccccchhHHHHHHHHHcCCCceEEEEEEeCCCCCcCChhHHHHHHHhcCCce---EeehhHHHHHh
Q 008469 260 PGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKI---ISIADLIRYRR 336 (564)
Q Consensus 260 PGHVfPL~a~~gGvl~R~GhTEAAVdLarlAGl~PaaVicEiv~~dG~mar~~~l~~fA~~h~L~i---vsi~DLi~yr~ 336 (564)
+|| .|...+ ++.-=+-..+++++.+-+|-..+.++|-+--..|.-.+.+.+.++-++.|+|+ ++++||+.|..
T Consensus 117 ~g~--VliVDD--vitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~~g~~~l~~~~~~~~~~g~~v~sl~~~~~l~~~~~ 192 (213)
T 1lh0_A 117 QGR--VMLVDD--VITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERDYGCKVISIITLKDLIAYLE 192 (213)
T ss_dssp CSE--EEEECS--CCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHHHCCEEEEEEEHHHHHHHHH
T ss_pred CCC--EEEEEe--cccchHHHHHHHHHHHHCCCeEEEEEEEEEcccCcccchhhHHHHHHHcCCCeEEEEEHHHHHHHHH
Confidence 673 344333 44433345678999999998777665544333333345677788888889875 45677888886
Q ss_pred hcc
Q 008469 337 KRD 339 (564)
Q Consensus 337 ~~e 339 (564)
++.
T Consensus 193 ~~~ 195 (213)
T 1lh0_A 193 EKP 195 (213)
T ss_dssp HCG
T ss_pred HcC
Confidence 543
No 28
>1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A*
Probab=26.03 E-value=57 Score=27.12 Aligned_cols=57 Identities=19% Similarity=0.180 Sum_probs=35.6
Q ss_pred EEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCCceeccc--CCCCcccccccCCc
Q 008469 426 VYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMT--NNPSKYVGLKGYGL 503 (564)
Q Consensus 426 VYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~~IrLLT--NNP~K~~aL~g~GI 503 (564)
+|+. .+-||.|+..+|-.+. .+.++..|++.|.|-+ +|| -....+..|.
T Consensus 96 ~~v~-p~~rg~Gig~~ll~~~---------------------------~~~~~~~g~~~i~l~~~~~n~-a~~~y~k~Gf 146 (177)
T 1ghe_A 96 LMVL-PSARGRGLGRQLMDEV---------------------------EQVAVKHKRGLLHLDTEAGSV-AEAFYSALAY 146 (177)
T ss_dssp EEEC-GGGTTSSHHHHHHHHH---------------------------HHHHHHTTCCEEEEEEETTSH-HHHHHHHTTC
T ss_pred EEEC-HHHcCCCHHHHHHHHH---------------------------HHHHHHcCCCEEEEEeccCCH-HHHHHHHcCC
Confidence 5665 7777777777765432 2234556777777665 454 4455567777
Q ss_pred EEEEEeec
Q 008469 504 AVAGRVPL 511 (564)
Q Consensus 504 eV~ervpl 511 (564)
++++..+.
T Consensus 147 ~~~~~~~~ 154 (177)
T 1ghe_A 147 TRVGELPG 154 (177)
T ss_dssp EEEEEEEE
T ss_pred EEcccccc
Confidence 77776553
No 29
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=25.09 E-value=99 Score=30.09 Aligned_cols=66 Identities=9% Similarity=0.197 Sum_probs=43.7
Q ss_pred cccccchhHHHHHHHHHcCCCceEEEEEEeCCCCCc-CChhHHHHHHHhcCCceE---eehhHHHHHhhc
Q 008469 273 VLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSM-ARLPKLREFAKRENLKII---SIADLIRYRRKR 338 (564)
Q Consensus 273 vl~R~GhTEAAVdLarlAGl~PaaVicEiv~~dG~m-ar~~~l~~fA~~h~L~iv---si~DLi~yr~~~ 338 (564)
|+.--+=..+++++.+-+|..+++++|=+=...|.. -..+..+++-++.|+|+. +++||+.|..+.
T Consensus 145 VitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~~~~~~a~~~~~~~~gv~v~sL~~~~~l~~~~~~~ 214 (232)
T 3mjd_A 145 VMTAGTAFYESYNKLKIINAKIAGVVLSIDRQEKAKDSDISATKKISQDFNIPVLAVTNFESIFEYVKEN 214 (232)
T ss_dssp CCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCBCCTTSSSCHHHHHHHHHCCCEEEEEEHHHHHHHHHHH
T ss_pred eccccHHHHHHHHHHHHCCCEEEEEEEEEECCcCCccccchhHHHHHHHcCCcEEEEEeHHHHHHHHHhh
Confidence 433334456789999999988888776543332211 224566788888999965 566778887554
No 30
>2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi}
Probab=24.95 E-value=68 Score=27.98 Aligned_cols=57 Identities=21% Similarity=0.261 Sum_probs=38.2
Q ss_pred EEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCCceecc--cCCCCcccccccCCc
Q 008469 426 VYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLM--TNNPSKYVGLKGYGL 503 (564)
Q Consensus 426 VYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~~IrLL--TNNP~K~~aL~g~GI 503 (564)
+|+. ++-||.|+..++-.. ..+.++.+|+++|.|- ..|+.-+.-.+.+|.
T Consensus 96 ~~v~-p~~rg~Gig~~ll~~---------------------------~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~GF 147 (182)
T 2jlm_A 96 VYIH-KDYRGLGLSKHLMNE---------------------------LIKRAVESEVHVMVGCIDATNVASIQLHQKLGF 147 (182)
T ss_dssp EEEC-TTSTTSSHHHHHHHH---------------------------HHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred EEEC-hhhcCCCHHHHHHHH---------------------------HHHHHHHCCceEEEEEEeCCCHHHHHHHHHCCC
Confidence 6775 777888887765432 1223467899998874 456555556678888
Q ss_pred EEEEEee
Q 008469 504 AVAGRVP 510 (564)
Q Consensus 504 eV~ervp 510 (564)
+..+..+
T Consensus 148 ~~~g~~~ 154 (182)
T 2jlm_A 148 IHSGTIQ 154 (182)
T ss_dssp EEEEEEE
T ss_pred cEEEEee
Confidence 8877655
No 31
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=24.86 E-value=82 Score=33.00 Aligned_cols=47 Identities=19% Similarity=0.201 Sum_probs=37.1
Q ss_pred hHHHHHHHHHcCCCceEEEEEEe-CCCCCcCChhHHHHHHHhcCCceE
Q 008469 280 TEASVDLAVLAGFDPAAVLCEVV-DDDGSMARLPKLREFAKRENLKII 326 (564)
Q Consensus 280 TEAAVdLarlAGl~PaaVicEiv-~~dG~mar~~~l~~fA~~h~L~iv 326 (564)
-|.+++-.+-.|..|.+|++... +..|.....+++.++|++||+.++
T Consensus 246 L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~ 293 (515)
T 2jis_A 246 LERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLH 293 (515)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEE
Confidence 44555545556888999888876 456999999999999999999865
No 32
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=24.14 E-value=66 Score=27.48 Aligned_cols=57 Identities=23% Similarity=0.356 Sum_probs=35.7
Q ss_pred EEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCCceeccc--CCCCcccccccCCc
Q 008469 426 VYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMT--NNPSKYVGLKGYGL 503 (564)
Q Consensus 426 VYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~~IrLLT--NNP~K~~aL~g~GI 503 (564)
+|+. ++-||.|+..+|-... .+..+.+|+++|.|.+ .|+.-....+..|.
T Consensus 89 ~~V~-p~~rg~Gig~~ll~~~---------------------------~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF 140 (175)
T 1yr0_A 89 VYVH-KDARGHGIGKRLMQAL---------------------------IDHAGGNDVHVLIAAIEAENTASIRLHESLGF 140 (175)
T ss_dssp EEEC-TTSTTSSHHHHHHHHH---------------------------HHHHHTTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred EEEC-ccccCCCHHHHHHHHH---------------------------HHHHHhCCccEEEEEecCCCHHHHHHHHHCCC
Confidence 5675 7778888887765321 2234567888877643 35444455567787
Q ss_pred EEEEEee
Q 008469 504 AVAGRVP 510 (564)
Q Consensus 504 eV~ervp 510 (564)
+.+++.+
T Consensus 141 ~~~g~~~ 147 (175)
T 1yr0_A 141 RVVGRFS 147 (175)
T ss_dssp EEEEEEE
T ss_pred EEEEEcc
Confidence 7776655
No 33
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=24.06 E-value=56 Score=27.12 Aligned_cols=32 Identities=25% Similarity=0.482 Sum_probs=27.0
Q ss_pred EEEeCCCCC---cCChhHHHHHHHhcCCceEeehh
Q 008469 299 CEVVDDDGS---MARLPKLREFAKRENLKIISIAD 330 (564)
Q Consensus 299 cEiv~~dG~---mar~~~l~~fA~~h~L~ivsi~D 330 (564)
+.++++||+ .++..++.+.|++.+|-+|-|+-
T Consensus 16 Vrli~~~Ge~lGv~~~~eAl~~A~e~~LDLVevsp 50 (78)
T 1tif_A 16 VRLIDQNGDQLGIKSKQEALEIAARRNLDLVLVAP 50 (78)
T ss_dssp EEEECTTSCEEEEEEHHHHHHHHHHTTCEEEEEET
T ss_pred EEEECCCCcCCCcccHHHHHHHHHHcCCCEEEECC
Confidence 568888885 47889999999999999998864
No 34
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=23.24 E-value=1.1e+02 Score=31.79 Aligned_cols=52 Identities=17% Similarity=0.221 Sum_probs=40.9
Q ss_pred cccchhHHHHHHHHHcCCCceEEEEEEeC-CCCCcCChhHHHHHHHhcCCceE
Q 008469 275 KRAGHTEASVDLAVLAGFDPAAVLCEVVD-DDGSMARLPKLREFAKRENLKII 326 (564)
Q Consensus 275 ~R~GhTEAAVdLarlAGl~PaaVicEiv~-~dG~mar~~~l~~fA~~h~L~iv 326 (564)
-...+-|++++-.+-.|..|..|++...+ ..|...+.+++.++|++||+.++
T Consensus 216 ~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lh 268 (475)
T 3k40_A 216 MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIH 268 (475)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEE
Confidence 34556677777677788889888776654 46999999999999999999853
No 35
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=22.82 E-value=94 Score=25.64 Aligned_cols=35 Identities=23% Similarity=0.167 Sum_probs=13.6
Q ss_pred HHHHHcCCCceeccc--CCCCcccccccCCcEEEEEe
Q 008469 475 QMLRDLGVRTMKLMT--NNPSKYVGLKGYGLAVAGRV 509 (564)
Q Consensus 475 QILrdLGV~~IrLLT--NNP~K~~aL~g~GIeV~erv 509 (564)
+.++..|+++|.|.+ .|+.-....+..|.+.++..
T Consensus 115 ~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~ 151 (166)
T 3jvn_A 115 QELKDYGVKEIFVEVWDFNKGALEFYNKQGLNEHIHY 151 (166)
T ss_dssp HHHHTTTCSEEEECCC--CCBC---------------
T ss_pred HHHHHcCCCEEEEEEecCCHHHHHHHHHcCCeEHHHH
Confidence 346678999998876 35555666778888776543
No 36
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=22.56 E-value=51 Score=29.15 Aligned_cols=58 Identities=19% Similarity=0.297 Sum_probs=39.2
Q ss_pred EEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCCceeccc--CCCCcccccccCCc
Q 008469 426 VYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMT--NNPSKYVGLKGYGL 503 (564)
Q Consensus 426 VYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~~IrLLT--NNP~K~~aL~g~GI 503 (564)
||+. .+-||.|+..+|-.+ ..+..+..|+++|.|.+ .|+.=+.--+.+|.
T Consensus 118 l~V~-p~~rg~GiG~~Ll~~---------------------------~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF 169 (199)
T 1u6m_A 118 ISVD-ERFRGMGIGSKLLDA---------------------------LPEVAKASGKQALGLNVDFDNPGARKLYASKGF 169 (199)
T ss_dssp EEEC-GGGTTSSHHHHHHHT---------------------------HHHHHHTTTCSEEEEEEETTCHHHHHHHHTTTC
T ss_pred EEEC-HHHcCCCHHHHHHHH---------------------------HHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCC
Confidence 5676 777787777776543 22346678999988865 45543444578898
Q ss_pred EEEEEeec
Q 008469 504 AVAGRVPL 511 (564)
Q Consensus 504 eV~ervpl 511 (564)
++++++++
T Consensus 170 ~~~~~~~~ 177 (199)
T 1u6m_A 170 KDVTTMTI 177 (199)
T ss_dssp EEEEEEEE
T ss_pred EEccEEEe
Confidence 88887764
No 37
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=22.17 E-value=1e+02 Score=32.12 Aligned_cols=49 Identities=16% Similarity=0.187 Sum_probs=39.3
Q ss_pred cchhHHHHHHHHHcCCCceEEEEEEeCC-CCCcCChhHHHHHHHhcCCce
Q 008469 277 AGHTEASVDLAVLAGFDPAAVLCEVVDD-DGSMARLPKLREFAKRENLKI 325 (564)
Q Consensus 277 ~GhTEAAVdLarlAGl~PaaVicEiv~~-dG~mar~~~l~~fA~~h~L~i 325 (564)
..+-|.+++=.+-.|..|..|++...+- .|.....+++.++|++||+.+
T Consensus 225 ~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~l 274 (481)
T 4e1o_A 225 GEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWL 274 (481)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeE
Confidence 3456667776677888899888776654 599999999999999999885
No 38
>4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti} PDB: 4fd6_A
Probab=22.04 E-value=62 Score=29.20 Aligned_cols=37 Identities=14% Similarity=0.138 Sum_probs=27.9
Q ss_pred HHHHcCCCceecccCCCCcccccccCCcEEEEEeecc
Q 008469 476 MLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLI 512 (564)
Q Consensus 476 ILrdLGV~~IrLLTNNP~K~~aL~g~GIeV~ervpl~ 512 (564)
.++..|++.+.+.+.|+.-..-.+.+|.++++.++..
T Consensus 158 ~~~~~g~~~~~~~~~~~~~~~~y~~~Gf~~~~~~~~~ 194 (222)
T 4fd5_A 158 LALDRGFQVMKTDATGAFSQRVVSSLGFITKCEINYT 194 (222)
T ss_dssp HHHHTTCCEEEEEECSHHHHHHHHHTTCEEEEEEEGG
T ss_pred HHHHCCCCEEEEEeCCHHHHHHHHHCCCEEEEEEchh
Confidence 4567789888888877655555678999998888753
No 39
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=21.69 E-value=57 Score=27.08 Aligned_cols=101 Identities=20% Similarity=0.220 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHhCCEEEEEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHH-------
Q 008469 407 GDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRD------- 479 (564)
Q Consensus 407 g~QL~~AL~~Ia~~G~GVlVYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrd------- 479 (564)
..++...++.+.+.+....+|+...+|+=+|...-...........++.. -..+...++.|.-|+|.++|+.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~-i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~ 127 (161)
T 3i3g_A 49 GVELANIADMRRRAGIVTKVFCHQPTGRIVGSASLMIQPKFTRGGRAVGH-IEDVVVDPSYRGAGLGKALIMDLCEISRS 127 (161)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETTTTEEEEEEEEEEECCSSGGGCCEEE-EEEEEECGGGTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCceEEEEEEcCCCeEEEEEEEeccCCCCCCccEEE-EEEEEEcHHHcccCHHHHHHHHHHHHHHH
Confidence 45677777777776655555555456655554321100000000011110 0124567889999999988765
Q ss_pred cCCCceecccCCCCcccccccCCcEEEEEe
Q 008469 480 LGVRTMKLMTNNPSKYVGLKGYGLAVAGRV 509 (564)
Q Consensus 480 LGV~~IrLLTNNP~K~~aL~g~GIeV~erv 509 (564)
.|+++|.|-+|.. -+.-.+..|.+.+++.
T Consensus 128 ~g~~~i~l~~~~~-n~~~y~k~GF~~~~~~ 156 (161)
T 3i3g_A 128 KGCYKVILDSSEK-SLPFYEKLGFRAHERQ 156 (161)
T ss_dssp TTCSEEEEEECTT-THHHHHHTTCEEEEEE
T ss_pred cCCcEEEEEeccc-chhHHHhcCCeecCce
Confidence 4999999988643 3555678888877653
No 40
>2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1
Probab=21.60 E-value=1e+02 Score=25.59 Aligned_cols=34 Identities=9% Similarity=0.026 Sum_probs=24.4
Q ss_pred HHHHcCCCceecccCCCCcccccccCCcEEEEEee
Q 008469 476 MLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVP 510 (564)
Q Consensus 476 ILrdLGV~~IrLLTNNP~K~~aL~g~GIeV~ervp 510 (564)
.++..|++.|.|-+| +.-+...+..|.+.+++..
T Consensus 110 ~~~~~g~~~i~~~~n-~~a~~~y~k~GF~~~~~~~ 143 (172)
T 2fiw_A 110 LAGARGALILTVDAS-DNAAEFFAKRGYVAKQRNT 143 (172)
T ss_dssp HHHTTTCSEEEEEEC-TTTHHHHHTTTCEEEEEEE
T ss_pred HHHhcCCcEEEEEeC-HHHHHHHHHcCCEEeccee
Confidence 455678999998884 5555566788888877654
No 41
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=21.22 E-value=68 Score=27.86 Aligned_cols=57 Identities=18% Similarity=0.258 Sum_probs=38.9
Q ss_pred EEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCCceeccc--CCCCcccccccCCc
Q 008469 426 VYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMT--NNPSKYVGLKGYGL 503 (564)
Q Consensus 426 VYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~~IrLLT--NNP~K~~aL~g~GI 503 (564)
||+. ++-||.|+..+|-.+ ..+..+..|+++|.|-+ .|+.-+.--+.+|.
T Consensus 96 l~V~-p~~rg~GiG~~Ll~~---------------------------~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF 147 (180)
T 1tiq_A 96 IYIK-NSFQKHGLGKHLLNK---------------------------AIEIALERNKKNIWLGVWEKNENAIAFYKKMGF 147 (180)
T ss_dssp EEEC-GGGCSSSHHHHHHHH---------------------------HHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTC
T ss_pred EEEC-HHHhCCCHHHHHHHH---------------------------HHHHHHHCCCCEEEEEehhcCHHHHHHHHHcCC
Confidence 6776 777887877766432 22345778999998865 45544455578898
Q ss_pred EEEEEee
Q 008469 504 AVAGRVP 510 (564)
Q Consensus 504 eV~ervp 510 (564)
++++..+
T Consensus 148 ~~~g~~~ 154 (180)
T 1tiq_A 148 VQTGAHS 154 (180)
T ss_dssp EEEEEEE
T ss_pred EEcCcEE
Confidence 8888766
No 42
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=20.53 E-value=53 Score=22.00 Aligned_cols=17 Identities=24% Similarity=0.415 Sum_probs=14.1
Q ss_pred CChHHHHHHHHHHHHhC
Q 008469 405 DCGDQLALAMQQIEAAG 421 (564)
Q Consensus 405 DCg~QL~~AL~~Ia~~G 421 (564)
-||.+|.+||..|=..|
T Consensus 5 lCG~~L~eaL~~vC~~G 21 (26)
T 2wfu_B 5 ACGPALMDMLRVACPNG 21 (26)
T ss_dssp CCHHHHHHHHHHHCSSC
T ss_pred hhhHHHHHHHHHHHhcc
Confidence 59999999999986544
Done!