BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008473
(564 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LYG9|MSL10_ARATH Mechanosensitive ion channel protein 10 OS=Arabidopsis thaliana
GN=MSL10 PE=1 SV=1
Length = 734
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/490 (42%), Positives = 307/490 (62%), Gaps = 38/490 (7%)
Query: 61 SPAANNNNNNKFTDSTGEVNLESY---SDEDEDDVHKDKQKRKILKK--PYVLIELAAFG 115
S A+ NN +N+ S V DEDE+ K K R++ K LIE A F
Sbjct: 117 SRASPNNKSNRSVGSPAPVTPSKVVVEKDEDEEIYKKVKLNREMRSKISTLALIESAFFV 176
Query: 116 CIMALLICSLTVKQLQNHVIWDFKLWKWCVFLLVIVSCRLVTKSLINALLFLIERNSSLR 175
I++ L+ SLT+ L++H W ++WKWCV ++VI S LVT + ++FLIE N LR
Sbjct: 177 VILSALVASLTINVLKHHTFWGLEVWKWCVLVMVIFSGMLVTNWFMRLIVFLIETNFLLR 236
Query: 176 QRFMYYVHGLRIIIRVFVWLSLFLLVRIFLFRHGVKRSKETTKILNYVTRVLASSLVGAA 235
++ +Y+VHGL+ ++VF+WL L L+ I LF H VKRS TK+L +TR L S L GA
Sbjct: 237 RKVLYFVHGLKKSVQVFIWLCLILVAWILLFNHDVKRSPAATKVLKCITRTLISILTGAF 296
Query: 236 LWCLKSFSVLLLAVSFQSKRFFNPIQETIFHQYLIQTLSGPPLMEINEQVRSEAFGMSAG 295
W +K+ + +LA +F FF+ IQ+++FHQY++QTLSG PLME E+V E S G
Sbjct: 297 FWLVKTLLLKILAANFNVNNFFDRIQDSVFHQYVLQTLSGLPLMEEAERVGREP---STG 353
Query: 296 -------------KEKYLIDVRKLKKIKRQKISAWTMKKLIDVARSSKLSVFSNQLEEFA 342
KEK +ID+ K+ K+KR+K+SAWTM+ L++ R+S LS S+ L+E A
Sbjct: 354 HLSFATVVKKGTVKEKKVIDMGKVHKMKREKVSAWTMRVLMEAVRTSGLSTISDTLDETA 413
Query: 343 EEEEDGEDGEIFKNANDKSDEELQMYKSIKSEFEAKSAANYIFKNVADTGCDYIGKEQLY 402
+ +++D E I SE EA +AA ++F+NVA +YI +E L
Sbjct: 414 -----------YGEGKEQADRE------ITSEMEALAAAYHVFRNVAQPFFNYIEEEDLL 456
Query: 403 RFLIAEEVSLLLNQFEGAAKTEKIQELEFKKWVLKVYNERKALSHFIKQSKAATQELNRL 462
RF+I EEV L+ F+GAA+T +I F +WV+KVY R+AL+H + +K A ++LN+L
Sbjct: 457 RFMIKEEVDLVFPLFDGAAETGRITRKAFTEWVVKVYTSRRALAHSLNDTKTAVKQLNKL 516
Query: 463 FTGIVVVVIIILWLILMGFLTTQALVFITSQLVLAAFMFGNTVKNIFESIIFLYVMHPFD 522
T I++VV +++WL+L+ TT+ L+F ++QLV AF+ G+T KN+FESI+F++VMHP+D
Sbjct: 517 VTAILMVVTVVIWLLLLEVATTKVLLFFSTQLVALAFIIGSTCKNLFESIVFVFVMHPYD 576
Query: 523 VGDRCIIDGV 532
VGDRC++DGV
Sbjct: 577 VGDRCVVDGV 586
>sp|Q84M97|MSL9_ARATH Mechanosensitive ion channel protein 9 OS=Arabidopsis thaliana
GN=MSL9 PE=2 SV=1
Length = 742
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/484 (38%), Positives = 298/484 (61%), Gaps = 32/484 (6%)
Query: 63 AANNNNNNKFTDSTGEVNLESYSDEDEDDVHKDKQKRKILK---KPYVLIELAAFGCIMA 119
A+ NN +N+ S + ++ ++++K + ++ + KP +EL F I+
Sbjct: 133 ASPNNKSNRSVASAALSKVAEEEPDENEEIYKKVKLHRVKRSGMKPLAFLELVVFMAILG 192
Query: 120 LLICSLTVKQLQNHVIWDFKLWKWCVFLLVIVSCRLVTKSLINALLFLIERNSSLRQRFM 179
LI SLT+ + H IW + WKWCV ++V +S LVT ++ ++F+IE+N LR++ +
Sbjct: 193 ALIVSLTIDVVNKHTIWGLEFWKWCVLVMVTLSGMLVTNWFMHFVVFIIEKNYLLRKKVL 252
Query: 180 YYVHGLRIIIRVFVWLSLFLLVRIFLFRHGVKRSKETTKILNYVTRVLASSLVGAALWCL 239
Y+VHGL+ ++VF+W SL L+ I LF VKR+++T + L+++T + S LVG+ L+ +
Sbjct: 253 YFVHGLKKNVQVFIWFSLVLIAWICLFDGDVKRTRKTKRFLDFITWTIVSLLVGSILFLV 312
Query: 240 KSFSVLLLAVSFQSKRFFNPIQETIFHQYLIQTLSGPPLMEINEQV-RSEAFG------- 291
K+F++ +LA F + FF IQE++FHQY++QTLSGPPL+E E V R + G
Sbjct: 313 KTFALKVLASKFNVRNFFERIQESVFHQYVLQTLSGPPLIEEAENVGRVPSTGHLSFTRT 372
Query: 292 -MSAGKEKYLIDVRKLKKIKRQKISAWTMKKLIDVARSSKLSVFSNQLEEFAEEEEDGED 350
K+K +ID+ K+ ++K++K+SAWTM+ LI+ +S +S S+ L+E
Sbjct: 373 KDGKVKDKKVIDMGKVHRMKQEKVSAWTMRVLIEAVGTSGISTISSTLDE---------- 422
Query: 351 GEIFKNANDKSDEELQMYKSIKSEFEAKSAANYIFKNVADTGCDYIGKEQLYRFLIAEEV 410
N +++D+E I +E EA +AA +F NVA +YI ++ L RF+I EEV
Sbjct: 423 ---VNNKKERTDKE------ITNEMEAVAAAYDVFNNVAKPNHNYIEEDDLLRFMIKEEV 473
Query: 411 SLLLNQFEGAAKTEKIQELEFKKWVLKVYNERKALSHFIKQSKAATQELNRLFTGIVVVV 470
L+L E A T KI F +WV+ VY RK + H + +K A ++L++L TGI+ V+
Sbjct: 474 DLVLPLIED-ADTGKITRKTFTEWVVNVYTSRKTIGHSLNDTKTAVKQLDKLITGILTVI 532
Query: 471 IIILWLILMGFLTTQALVFITSQLVLAAFMFGNTVKNIFESIIFLYVMHPFDVGDRCIID 530
I+W++L+ +T+ L+ +SQ + AFM G+T KNIFES +F++VMHP+DVGDRC++D
Sbjct: 533 TFIVWMVLLDIASTKLLLVFSSQFLGLAFMIGSTCKNIFESFMFVFVMHPYDVGDRCVVD 592
Query: 531 GVQV 534
GV +
Sbjct: 593 GVML 596
>sp|F4IME2|MSL8_ARATH Mechanosensitive ion channel protein 8 OS=Arabidopsis thaliana
GN=MSL8 PE=2 SV=2
Length = 908
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 283/514 (55%), Gaps = 74/514 (14%)
Query: 89 EDDVHKDKQKRKILKKPYVLIELAAFGCIMALLICSLTVKQLQNHVIWDFKLWKWCVFLL 148
E+DV D+ KR L L++ + I+A L CSL+++ + +W+ LWKW VFLL
Sbjct: 284 EEDV-PDEYKRGKLDA-ITLLQWLSLVAIIAALACSLSIQSWKKVRVWNLHLWKWEVFLL 341
Query: 149 VIVSCRLVTKSLINALLFLIERNSSLRQRFMYYVHGLRIIIRVFVWLSLFLLVRIFLFRH 208
V++ RLV+ I ++F IERN LR+R +Y+V+G+R ++ +WL L LL FLF
Sbjct: 342 VLICGRLVSGWGIRIVVFFIERNFLLRKRVLYFVYGVRRAVQNCLWLGLVLLAWHFLFDK 401
Query: 209 GVKRSKETTKILNYVTRVLASSLVGAALWCLKSFSVLLLAVSFQSKRFFNPIQETIFHQY 268
V+R + + L YVT++L L+ LW +K+ V +LA SF +F+ IQE +F+QY
Sbjct: 402 KVQRETRS-RFLPYVTKILVCFLLSTILWLIKTLVVKVLASSFHVSTYFDRIQEALFNQY 460
Query: 269 LIQTLSGPPLMEINE------QVRSEAFGM----------------SAGKEKYL------ 300
+I+TLSGPP++E++ + + E F M GK +
Sbjct: 461 VIETLSGPPMIEMSRIEEEEERAQDEIFKMQNAGANLPPDLCAAAFPPGKSGRVMNPKLS 520
Query: 301 -----------IDVRKLKKIKRQKISAWTMKKLIDVARSSKLSVFSNQLEEFAEEEEDGE 349
I + L ++ + ISAW MK+L+ + R+ L+ Q+ E E+E
Sbjct: 521 PIIPKSTTDNGISMEHLHRMNHKNISAWNMKRLMKIVRNVSLTTLDEQMLESTYEDEST- 579
Query: 350 DGEIFKNANDKSDEELQMYKSIKSEFEAKSAANYIFKNVADTGCDYIGKEQLYRFLIAEE 409
+ I+SE EAK+AA IFKNV G YI E L RFL +E
Sbjct: 580 -------------------RQIRSEKEAKAAARKIFKNVEQRGAKYIYLEDLMRFLREDE 620
Query: 410 VSLLLNQFEGAAKTEKIQELEFKKWVLKVYNERKALSHFIKQSKAATQELNRLFTGIVVV 469
+ FEGA + ++I + K W++ + ER+AL+ + +K A +L+ + + +
Sbjct: 621 AMKTMGLFEGAPENKRISKSALKNWLVNAFRERRALALTLNDTKTAVNKLHHMINIVTAI 680
Query: 470 VIIILWLILMGFLTTQALVFITSQLVLAAFMFGNTVKNIFESIIFLYVMHPFDVGDRCII 529
VI+++WL+L+ +++ L+F++SQ+VL AF+FGNTVK +FESIIFL+++HP+DVGDRC I
Sbjct: 681 VIVVIWLVLLEIASSKVLLFVSSQVVLLAFIFGNTVKTVFESIIFLFIVHPYDVGDRCEI 740
Query: 530 DGVQ--------VTDIFI----LKIEVCVSLLYR 551
D VQ +T +F+ LKI SLL++
Sbjct: 741 DSVQLVVEEMNILTTVFLRYDNLKIMYPNSLLWQ 774
>sp|Q9LH74|MSL5_ARATH Mechanosensitive ion channel protein 5 OS=Arabidopsis thaliana
GN=MSL5 PE=2 SV=1
Length = 881
Score = 283 bits (723), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/517 (35%), Positives = 283/517 (54%), Gaps = 70/517 (13%)
Query: 58 LLTSPAANNNNNNKFTDSTGEVNLESYSDED-EDDVHKDKQKRKILKKPYVLIELAAFGC 116
L SP A N F + + + DED ++ +DK +V +E +
Sbjct: 228 LGKSPKAGTPGRNGFEEEE---EEDPFLDEDLPEEFKRDKLSF------WVFLEWISLVL 278
Query: 117 IMALLICSLTVKQLQNHVIWDFKLWKWCVFLLVIVSCRLVTKSLINALLFLIERNSSLRQ 176
I+ L+CSLT+ LQ W LWKW V +LV++ RLV+ ++ ++FL+E+N + R+
Sbjct: 279 IVTSLVCSLTIHNLQRKTWWKLDLWKWEVTVLVLICGRLVSSWIVRIIVFLVEKNFTWRK 338
Query: 177 RFMYYVHGLRIIIRVFVWLSLFLLVRIFLFRHGVKRSKETTKILNYVTRVLASSLVGAAL 236
R +Y+V+G+R ++ +WL L LL FLF V+R +T L YVTRVL LV +
Sbjct: 339 RVLYFVYGVRKSVQNCLWLGLVLLAWHFLFDKKVERETRST-ALRYVTRVLVCLLVALII 397
Query: 237 WCLKSFSVLLLAVSFQSKRFFNPIQETIFHQYLIQTLSGPPLMEIN----------EQVR 286
W +K+ V +LA SF +F+ IQE++F QY+I+TLSGPPLMEI E V+
Sbjct: 398 WLVKTILVKVLASSFHMSTYFDRIQESLFTQYVIETLSGPPLMEIQRMEEEEQQVAEDVK 457
Query: 287 S-----------------------------EAFGMSAGKEKYLIDVRKLKKIKRQKISAW 317
S G G++ I + +LK++ + +SAW
Sbjct: 458 SLEKLAGAKLPPALKATVKSFMKVGKSPGLNRIGSKRGEDGEGIRIDQLKRMNTKNVSAW 517
Query: 318 TMKKLIDVARSSKLSVFSNQLEEFAEEEEDGEDGEIFKNANDKSDEELQMYKSIKSEFEA 377
MK+L+++ +S +++ +E+ED I+SE+EA
Sbjct: 518 NMKRLMNIILKGAISTLDQNMQDTTQEDEDA--------------------THIRSEYEA 557
Query: 378 KSAANYIFKNVADTGCDYIGKEQLYRFLIAEEVSLLLNQFEGAAKTEKIQELEFKKWVLK 437
K AA IF NV + G YI E RFL EE + FEGA++++KI + K WV+K
Sbjct: 558 KCAARKIFHNVTEPGSRYIYLEDFLRFLCEEEAERAMALFEGASESDKISKSCLKNWVVK 617
Query: 438 VYNERKALSHFIKQSKAATQELNRLFTGIVVVVIIILWLILMGFLTTQALVFITSQLVLA 497
+ ER+AL+ + +K A L+R+ ++ ++III+WL+++G TT+ L+ ++SQL+L
Sbjct: 618 AFRERRALALTLNDTKTAVDRLHRIINVVIGIIIIIIWLLILGIATTRFLLVLSSQLLLV 677
Query: 498 AFMFGNTVKNIFESIIFLYVMHPFDVGDRCIIDGVQV 534
AF+FGN+ K IFE+IIFL+VMHPFDVGDRC IDGVQ+
Sbjct: 678 AFVFGNSCKTIFEAIIFLFVMHPFDVGDRCEIDGVQL 714
>sp|Q9LPG3|MSL4_ARATH Mechanosensitive ion channel protein 4 OS=Arabidopsis thaliana
GN=MSL4 PE=3 SV=1
Length = 881
Score = 280 bits (715), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 266/478 (55%), Gaps = 69/478 (14%)
Query: 106 YVLIELAAFGCIMALLICSLTVKQLQNHVIWDFKLWKWCVFLLVIVSCRLVTKSLINALL 165
+V+IE I+A LICSL + L+ +WD LWKW V +LV++ RLV+ ++ +
Sbjct: 258 WVIIEWIFLILIIASLICSLVIPYLRGKTLWDLALWKWEVMVLVLICGRLVSSWIVKLFV 317
Query: 166 FLIERNSSLRQRFMYYVHGLRIIIRVFVWLSLFLLVRIFLFRHGVKRSKETTKILNYVTR 225
+ +E N R++ +Y+V+G+R ++ +WL L L+ FLF V+R +T +L YVT+
Sbjct: 318 YFVESNFLWRKKVLYFVYGIRKPVQNCLWLGLVLIAWHFLFDKKVEREMRST-VLKYVTK 376
Query: 226 VLASSLVGAALWCLKSFSVLLLAVSFQSKRFFNPIQETIFHQYLIQTLSGPPLMEIN--- 282
VL LV +W +K+ V +LA SF +F+ IQE++F QY+I+TLSGPP +EI+
Sbjct: 377 VLICLLVAVIIWLIKTLLVKVLASSFHMSTYFDRIQESLFTQYVIETLSGPPRIEIHIEE 436
Query: 283 EQVRSE------------AFGMSA---------------------GKEKYL--------- 300
E+V ++ G A GK L
Sbjct: 437 EKVANDVKTFEIVGRKLSPLGPKAVSSPPQVTVGSGRLQKSPSRVGKSPVLSRSGSKKEG 496
Query: 301 ----IDVRKLKKIKRQKISAWTMKKLIDVARSSKLSVFSNQLEEFAEEEEDGEDGEIFKN 356
I + L+++ + +SAW MKKL++V + LS Q+++ +E+D
Sbjct: 497 GEEGIRIDHLQRMNTKNVSAWKMKKLMNVIKKGTLSTLDEQIQDTTTQEDDKA------- 549
Query: 357 ANDKSDEELQMYKSIKSEFEAKSAANYIFKNVADTGCDYIGKEQLYRFLIAEEVSLLLNQ 416
I+SEFEAK AA IF+NVA+ G YI E RFL +E ++
Sbjct: 550 ------------TQIRSEFEAKLAARKIFQNVAEPGSRYIYMEDFMRFLSEDESERAMDL 597
Query: 417 FEGAAKTEKIQELEFKKWVLKVYNERKALSHFIKQSKAATQELNRLFTGIVVVVIIILWL 476
FEGA++ KI + K WV+ + ER+AL+ + +K A L+R+ +V +VI+I+WL
Sbjct: 598 FEGASECHKISKSCLKNWVVNAFRERRALALTLNDTKTAVNRLHRIVDVLVSIVILIIWL 657
Query: 477 ILMGFLTTQALVFITSQLVLAAFMFGNTVKNIFESIIFLYVMHPFDVGDRCIIDGVQV 534
+++G TT+ L+ I+SQL+L F+FGN+ K IFE++IF++VMHPFDVGDRC IDGVQ+
Sbjct: 658 LILGIATTKFLLVISSQLLLVVFVFGNSCKTIFEAVIFVFVMHPFDVGDRCEIDGVQM 715
>sp|Q9SYM1|MSL6_ARATH Mechanosensitive ion channel protein 6 OS=Arabidopsis thaliana
GN=MSL6 PE=1 SV=1
Length = 856
Score = 268 bits (686), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 278/496 (56%), Gaps = 64/496 (12%)
Query: 82 ESYSDEDEDDVHK----DKQKRKILKKPYVLIELAAFGCIMALLICSLTVKQLQNHVIWD 137
++ +E+EDD ++ RK ++++E + I+A +C+L + L+ +W+
Sbjct: 213 KTQGEEEEDDPFAAEDLPEEYRKDKLSLWIVLEWLSLILIIAGFVCTLAIPSLRKKKLWE 272
Query: 138 FKLWKWCVFLLVIVSCRLVTKSLINALLFLIERNSSLRQRFMYYVHGLRIIIRVFVWLSL 197
+LWKW +LV++ RLV+ ++ ++F IERN LR+R +Y+V+G+R ++ +WL L
Sbjct: 273 LQLWKWESMVLVLICGRLVSSWIVKIVVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGL 332
Query: 198 FLLVRIFLFRHGVKRSKETTKILNYVTRVLASSLVGAALWCLKSFSVLLLAVSFQSKRFF 257
LL FLF V ++ TK L VT++ LVG LW +K+ V +LA SF +F
Sbjct: 333 VLLAWHFLFDEKVAKAA-NTKALRVVTKIFVCLLVGFLLWLVKTLLVKVLASSFHMSTYF 391
Query: 258 NPIQETIFHQYLIQTLSGPPLMEINE-----------------------QVRSEAFGMSA 294
+ IQE++F QY+I+TLSGPPL+EI + Q ++ M
Sbjct: 392 DRIQESLFTQYVIETLSGPPLIEIQKNEEEEERISVEVKKFQNPGGVEIQSGAQKSPMKT 451
Query: 295 GKEKYL----------------IDVRKLKKIKRQKISAWTMKKLIDVARSSKLSVFSNQL 338
GK +L I + L K+ + +SAW MK+L+++ R+ L+ QL
Sbjct: 452 GKSPFLSHVLSNGGGGGGENKGITIDSLHKLNPKNVSAWKMKRLMNIIRNGSLTTLDEQL 511
Query: 339 EEFAEEEEDGEDGEIFKNANDKSDEELQMYKSIKSEFEAKSAANYIFKNVADTGCDYIGK 398
++ + +++ G I+SEFEAK AA IF NVA G +I
Sbjct: 512 QDPSLDDDKG--------------------NQIRSEFEAKLAARKIFHNVAKPGSKFIYA 551
Query: 399 EQLYRFLIAEEVSLLLNQFEGAAKTEKIQELEFKKWVLKVYNERKALSHFIKQSKAATQE 458
+ RFL +E L+ FEGA++T +I + K WV+ + ER+AL+ + +K A
Sbjct: 552 NDIMRFLPDDEALKTLSLFEGASETNRISKSSLKNWVVNAFRERRALALTLNDTKTAVNR 611
Query: 459 LNRLFTGIVVVVIIILWLILMGFLTTQALVFITSQLVLAAFMFGNTVKNIFESIIFLYVM 518
L+++ +V ++I+++WLI++G +T+ LV ++SQ+V+ AF+FGN K +FESII+L+V+
Sbjct: 612 LHKMVNIVVGIIILVIWLIILGITSTKFLVVMSSQVVVVAFIFGNMCKIVFESIIYLFVI 671
Query: 519 HPFDVGDRCIIDGVQV 534
HPFDVGDRC IDGVQ+
Sbjct: 672 HPFDVGDRCEIDGVQM 687
>sp|F4IME1|MSL7_ARATH Mechanosensitive ion channel protein 7 OS=Arabidopsis thaliana
GN=MSL7 PE=3 SV=1
Length = 849
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/476 (34%), Positives = 265/476 (55%), Gaps = 62/476 (13%)
Query: 99 RKILKKPYVLIELAAFGCIMALLICSLTVKQLQNHVIWDFKLWKWCVFLLVIVSCRLVTK 158
RK+ L++ + ++ L+ SL + +N +W LWKW V LLV++ RLV+
Sbjct: 225 RKLKMDAITLLQWMSLIALVVALVLSLGLHTWRNATLWSLHLWKWEVVLLVLICGRLVSG 284
Query: 159 SLINALLFLIERNSSLRQRFMYYVHGLRIIIRVFVWLSLFLLVRIFLFRHGVKRSKETTK 218
I ++F IERN LR+R +Y+V+G++ ++ +WL L LL FLF V++ ++
Sbjct: 285 CGIRIIVFFIERNFLLRKRVLYFVYGVKTAVQNCLWLGLVLLAWHFLFDKKVEKETQS-D 343
Query: 219 ILNYVTRVLASSLVGAALWCLKSFSVLLLAVSFQSKRFFNPIQETIFHQYLIQTLSGPPL 278
+L ++++L L+ LW +K+ V +LA SF +F+ IQE +FH YLI+TLSGPP+
Sbjct: 344 VLLLMSKILVCFLLSTVLWLIKTLVVKVLASSFHVSTYFDRIQEALFHHYLIETLSGPPM 403
Query: 279 MEIN------EQVRSEAFGMSAG--------------KEKYL------------------ 300
+E++ ++ + E + M G +EK
Sbjct: 404 LELSRIEEEEDRTQDEIYKMQKGGADLSPELCSAAFPQEKSGSTMNMKFSPIIPKTGSDN 463
Query: 301 -IDVRKLKKIKRQKISAWTMKKLIDVARSSKLSVFSNQ-LEEFAEEEEDGEDGEIFKNAN 358
I + L K+ ++ +SAW MK+L+ + R+ LS Q L+ E+E
Sbjct: 464 GITMDDLHKMNQKNVSAWNMKRLMKIVRNVSLSTLDEQALQNTCEDEST----------- 512
Query: 359 DKSDEELQMYKSIKSEFEAKSAANYIFKNVADTGCDYIGKEQLYRFLIAEEVSLLLNQFE 418
+ I+SE EAK+AA IFKNVA G +I E L RFL +E + FE
Sbjct: 513 ----------RQIRSEKEAKAAARKIFKNVAQPGTKHIYLEDLMRFLRVDEAMKTMCLFE 562
Query: 419 GAAKTEKIQELEFKKWVLKVYNERKALSHFIKQSKAATQELNRLFTGIVVVVIIILWLIL 478
GA T+KI + K W++ + ER+AL+ + +K A +L+ + + + +VII++WLIL
Sbjct: 563 GALVTKKITKSALKNWLVNAFRERRALALTLNDTKTAVNKLHHMISFLTAIVIIVIWLIL 622
Query: 479 MGFLTTQALVFITSQLVLAAFMFGNTVKNIFESIIFLYVMHPFDVGDRCIIDGVQV 534
+ T++ L+F+TSQ+VL AFMFGN++K +FESIIFL+++HP+DVGDR +ID V++
Sbjct: 623 LEIATSKYLLFLTSQVVLLAFMFGNSLKTVFESIIFLFIIHPYDVGDRLLIDTVEM 678
>sp|O14050|YEYH_SCHPO Uncharacterized MscS family protein C2C4.17c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC2C4.17c PE=3 SV=1
Length = 840
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 136/286 (47%), Gaps = 45/286 (15%)
Query: 281 INEQVRSEAFGMSAGKEKYLIDVRKLKKIKRQKISAWTMKKLIDVARSSKLSVFSNQLEE 340
I+ + SE+ G GK +RK+KKI + K++ R++ + F++ L
Sbjct: 295 IDTRSMSESKGSGNGK------LRKVKKISKNA------KRIFSKTRNAISTAFTDMLG- 341
Query: 341 FAEEEEDGEDGEIFKNANDKSDEELQMYKSIKSEFEAKSAANYIFKNVADTGCDYIGKEQ 400
K+A D + E+ + ++I+S+ + + A I+ ++ G D KE
Sbjct: 342 --------------KHAKDLTPEQEFILETIRSKKKCLALARKIWYSLVPEGEDCFQKED 387
Query: 401 LYRFLIAEEVSLLLNQFEGA-AKTEKIQELEFKKWVLKVYNERKALSHFIKQSKAATQEL 459
L + +E++ + + + ++T + E+E ++ ++ E +++S ++ A +L
Sbjct: 388 LIGLIPDDEINDIFHILDNDYSRTVTLDEME--QFTREISIEFRSISSSLRDVDLALGKL 445
Query: 460 NRLFTGIVVVVIIILWLILMGFLTTQALVFITSQLVLAAFMFGNTVKNIFESIIFLYVMH 519
+R+ G+V ++ ++ ++ + L + L+ +F+F + + + SIIFL+ H
Sbjct: 446 DRVGLGVVGIIAVLTFISFLDTSFATILAAFGTTLLSLSFVFSTSAQELMSSIIFLFSKH 505
Query: 520 PFDVGDRCIIDGVQVTDIFILKIE-VCVSLLYRVLFALQLFITDGG 564
PFD+ D I++ + K E V +SLL+ V F T GG
Sbjct: 506 PFDISDVVIVNNI--------KYEVVSLSLLFTV------FRTMGG 537
>sp|O74839|YC1B_SCHPO Uncharacterized MscS family protein C1183.11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1183.11 PE=1 SV=1
Length = 1011
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Query: 436 LKVYNERKALSHFIKQSKAATQELNRLFTGIVVVVIIILWLILMGFLTTQALVFITSQLV 495
+++ ERK++S ++ + +L+ + IV V+ + ++L L+ + L + L+
Sbjct: 573 VEIGKERKSISASLRDLNDSISKLDGICMFIVAVITLFIFLYLIARNFSGVLTSAGTTLL 632
Query: 496 LAAFMFGNTVKNIFESIIFLYVMHPFDVGDR--CIIDGVQVTDIFILKIEVCVSLLYRVL 553
+++F + + + SIIF++V HP+DVGDR +I+G VT + +I + +S +R+L
Sbjct: 633 GLSWLFSGSAQELLSSIIFVFVKHPYDVGDRVDVMINGT-VTSAMVKEISI-MSTEFRLL 690
>sp|O88777|PSN2_RAT Presenilin-2 OS=Rattus norvegicus GN=Psen2 PE=2 SV=2
Length = 448
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 43/181 (23%)
Query: 50 DLVEETTQLLT--SPAANNNNNNKFTDSTGEVNLESYSDEDEDDVHKDKQK---RKILKK 104
++ +E T L++ SP + + +++ GE + S E+EDD +D + +
Sbjct: 12 EVCDERTSLMSAESPTSRSCQDSRPGPEDGENTAQWRSQENEDDCEEDPDHYACSGVPGR 71
Query: 105 PYVLIELAAFGCIMALLICSLTVKQLQNHVIWDFKLWKWCVFLLVIVSCRLVTKSLINAL 164
P L E LT+K HVI + + + C +V + I ++
Sbjct: 72 PSGLEE-------------ELTLKYGAKHVI---------MLFVPVTLCMIVVVATIKSV 109
Query: 165 LFLIERN------------SSLRQRFMYYVHGLRIIIRVFVWLSLFLLV----RIFLFRH 208
F E+N S+ QR + V I+I V V +++FL+V R + F H
Sbjct: 110 RFYTEKNGQLIYTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIH 169
Query: 209 G 209
G
Sbjct: 170 G 170
>sp|Q48HZ2|ARNC_PSE14 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6) GN=arnC PE=3 SV=1
Length = 337
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 428 ELEFKKWVLKVYNERKALSHFIKQSKAATQELNRLFTGIVV 468
++F V+ VYNER++L +++++AA + LN F ++V
Sbjct: 5 PIKFVSIVIPVYNERQSLPELLRRTEAACKHLNHRFEIVLV 45
>sp|Q47BI0|LEU1_DECAR 2-isopropylmalate synthase OS=Dechloromonas aromatica (strain RCB)
GN=leuA PE=3 SV=1
Length = 513
Score = 32.7 bits (73), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 269 LIQTLSGPPLMEINEQVRSEAFGMSAG-KEKYLIDVRKLKKIKRQKISAWTMKKLIDVAR 327
L+ ++G P+ V + AF +G + ++ R+ +I R + WT KL+ + +
Sbjct: 272 LVSQITGYPVQPNKAVVGANAFAHESGIHQDGVLKHRETYEIMRAQDVGWTQNKLV-LGK 330
Query: 328 SSKLSVFSNQLEEFAEEEEDGE 349
S + F N+L+E E E E
Sbjct: 331 HSGRNAFKNRLQELGIELESDE 352
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,970,214
Number of Sequences: 539616
Number of extensions: 7309821
Number of successful extensions: 42868
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 42231
Number of HSP's gapped (non-prelim): 636
length of query: 564
length of database: 191,569,459
effective HSP length: 123
effective length of query: 441
effective length of database: 125,196,691
effective search space: 55211740731
effective search space used: 55211740731
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)