Citrus Sinensis ID: 008475
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 564 | 2.2.26 [Sep-21-2011] | |||||||
| A5A7I7 | 557 | Calcium-dependent protein | N/A | no | 0.984 | 0.996 | 0.848 | 0.0 | |
| A5A7I8 | 535 | Calcium-dependent protein | N/A | no | 0.948 | 1.0 | 0.835 | 0.0 | |
| Q38871 | 556 | Calcium-dependent protein | yes | no | 0.982 | 0.996 | 0.839 | 0.0 | |
| Q38872 | 544 | Calcium-dependent protein | no | no | 0.964 | 1.0 | 0.830 | 0.0 | |
| Q9SZM3 | 484 | Calcium-dependent protein | no | no | 0.858 | 1.0 | 0.874 | 0.0 | |
| P53684 | 542 | Calcium-dependent protein | no | no | 0.888 | 0.924 | 0.755 | 0.0 | |
| Q38870 | 646 | Calcium-dependent protein | no | no | 0.964 | 0.842 | 0.657 | 0.0 | |
| Q06850 | 610 | Calcium-dependent protein | no | no | 0.840 | 0.777 | 0.741 | 0.0 | |
| P53682 | 534 | Calcium-dependent protein | no | no | 0.932 | 0.985 | 0.657 | 0.0 | |
| P28583 | 508 | Calcium-dependent protein | no | no | 0.838 | 0.931 | 0.730 | 0.0 |
| >sp|A5A7I7|CDPK4_SOLTU Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/566 (84%), Positives = 516/566 (91%), Gaps = 11/566 (1%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHSNNSKRN--TNSDCTNSDYSTPSLNSQQLVSQEFSKE 58
MGNTCRGS GK +QGY+QPED S ++ N + + ++SD +P+ N+QQ
Sbjct: 1 MGNTCRGSIGGKTFQGYTQPEDSSCSTNHNPSSGNSYSSSDNFSPTSNAQQ-------NS 53
Query: 59 NPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLC 118
N KK++S +SP K M R NQ YYV+GH T NIRDLYTLGRKLGQGQFGTTYLC
Sbjct: 54 NHKKEHSLSLVSPRKAS--MNRSGSNQAYYVMGHMTPNIRDLYTLGRKLGQGQFGTTYLC 111
Query: 119 TEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178
TE +TG E+ACKSISKRKLIS+EDVEDVRREIQIMHHL+GH+NIVTIKGAYED L VHIV
Sbjct: 112 TENSTGAEYACKSISKRKLISKEDVEDVRREIQIMHHLSGHRNIVTIKGAYEDPLYVHIV 171
Query: 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238
ME+C+GGELFDRIIQRGHYSERKAAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNKD+
Sbjct: 172 MEICSGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDN 231
Query: 239 DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGV 298
DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGV
Sbjct: 232 DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGV 291
Query: 299 PPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
PPFWAETQQGIFDAVLKGHIDF+SDPWPLIS+SAKDLIRKMLC QPSERLTAHEVLCHPW
Sbjct: 292 PPFWAETQQGIFDAVLKGHIDFDSDPWPLISESAKDLIRKMLCMQPSERLTAHEVLCHPW 351
Query: 359 ICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDN 418
ICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL+EMFKAMDTD+
Sbjct: 352 ICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFKAMDTDS 411
Query: 419 SGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEH 478
SGAITFDELKAGLR+YGSTLKDTEIR+LMDAADVDNSGTIDYGEFIAATVHLNKLEREEH
Sbjct: 412 SGAITFDELKAGLRKYGSTLKDTEIRELMDAADVDNSGTIDYGEFIAATVHLNKLEREEH 471
Query: 479 LVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
L+AAFQYFDKDGSGYITVDE+QQAC EHNMTDV EDIIREVDQDNDGRIDYGEFVAMMQ
Sbjct: 472 LMAAFQYFDKDGSGYITVDEVQQACIEHNMTDVYFEDIIREVDQDNDGRIDYGEFVAMMQ 531
Query: 539 KGNVGLGRRTMRNSLNMSMRDAPGSQ 564
KGN +GRRTMRNSLN+SMRDAPG+Q
Sbjct: 532 KGNPCIGRRTMRNSLNLSMRDAPGAQ 557
|
Regulates the production of reactive oxygen species (ROS) by NADPH oxidase. Solanum tuberosum (taxid: 4113) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|A5A7I8|CDPK5_SOLTU Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/564 (83%), Positives = 502/564 (89%), Gaps = 29/564 (5%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENP 60
MGN CRGSF GK +QGY QP+DHS + N+N NSD P Q LV+
Sbjct: 1 MGNACRGSFGGKTFQGYPQPQDHSES---NSNPK-HNSDSPKPKKEQQPLVT-------- 48
Query: 61 KKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTE 120
M R NQ+YYVLGHKT NIRDLYTLGRKLGQGQFGTTYLCTE
Sbjct: 49 -----------------MNRTSTNQSYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTE 91
Query: 121 IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180
+++GI++ACKSI+KRKLIS+EDVEDVRREIQIMHHLAGHKNIV+IKGAYED L VHIVME
Sbjct: 92 LSSGIDYACKSIAKRKLISKEDVEDVRREIQIMHHLAGHKNIVSIKGAYEDPLYVHIVME 151
Query: 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240
LC GGELFDRIIQRGHY+ERKAA+LT+IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF
Sbjct: 152 LCGGGELFDRIIQRGHYTERKAADLTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 211
Query: 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP 300
SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP
Sbjct: 212 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP 271
Query: 301 FWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360
FWAETQQGIFDAVLKGHIDF+SDPWPL+S+SAKDLIRKMLC +PSERLTAHEVLCHPWIC
Sbjct: 272 FWAETQQGIFDAVLKGHIDFDSDPWPLLSESAKDLIRKMLCMRPSERLTAHEVLCHPWIC 331
Query: 361 ENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSG 420
ENGVAPDR+LDPAVLSRLK FSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSG
Sbjct: 332 ENGVAPDRALDPAVLSRLKHFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSG 391
Query: 421 AITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 480
AITFDELKAGLR+YGSTLKD EIR+LMDAADVDNSGTIDYGEFIAAT+HLNKL+REEHL+
Sbjct: 392 AITFDELKAGLRKYGSTLKDIEIRELMDAADVDNSGTIDYGEFIAATIHLNKLDREEHLM 451
Query: 481 AAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540
AAFQYFDKDGSGYITVDELQQACA+HN+TDV EDIIREVDQDNDGRIDYGEFVAMMQKG
Sbjct: 452 AAFQYFDKDGSGYITVDELQQACADHNITDVFFEDIIREVDQDNDGRIDYGEFVAMMQKG 511
Query: 541 NVGLGRRTMRNSLNMSMRDAPGSQ 564
N +GRRTMRNSLN SMRDAPG+
Sbjct: 512 NPCIGRRTMRNSLNFSMRDAPGAH 535
|
Regulates the production of reactive oxygen species (ROS) by NADPH oxidase. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q38871|CDPK5_ARATH Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 964 bits (2492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/562 (83%), Positives = 514/562 (91%), Gaps = 8/562 (1%)
Query: 1 MGNTCRGSFTGKLYQG-YSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKEN 59
MGN+CRGSF KL +G ++PED+S S N +S NSD+S N+ +++QEFSK+N
Sbjct: 1 MGNSCRGSFKDKLDEGDNNKPEDYSKTSTTNLSS---NSDHSP---NAADIIAQEFSKDN 54
Query: 60 PKKDNSA-PRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLC 118
+NS P + ++ IMRR DNQ YYVLGHKT NIRD+YTL RKLGQGQFGTTYLC
Sbjct: 55 NSNNNSKDPALVIPLREPIMRRNPDNQAYYVLGHKTPNIRDIYTLSRKLGQGQFGTTYLC 114
Query: 119 TEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178
TEIA+G+++ACKSISKRKLIS+EDVEDVRREIQIMHHLAGH +IVTIKGAYEDSL VHIV
Sbjct: 115 TEIASGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHGSIVTIKGAYEDSLYVHIV 174
Query: 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238
MELCAGGELFDRIIQRGHYSERKAAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNKDD
Sbjct: 175 MELCAGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 234
Query: 239 DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGV 298
DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK YGPEADVWTAGVILYILLSGV
Sbjct: 235 DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKRYGPEADVWTAGVILYILLSGV 294
Query: 299 PPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
PPFWAETQQGIFDAVLKG+IDFESDPWP+ISDSAKDLIR+ML S+P+ERLTAHEVL HPW
Sbjct: 295 PPFWAETQQGIFDAVLKGYIDFESDPWPVISDSAKDLIRRMLSSKPAERLTAHEVLRHPW 354
Query: 359 ICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDN 418
ICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMAL+VIAESLSEEEIAGL+EMF+AMDTDN
Sbjct: 355 ICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALKVIAESLSEEEIAGLREMFQAMDTDN 414
Query: 419 SGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEH 478
SGAITFDELKAGLR+YGSTLKDTEI DLMDAADVDNSGTIDY EFIAAT+HLNKLEREEH
Sbjct: 415 SGAITFDELKAGLRKYGSTLKDTEIHDLMDAADVDNSGTIDYSEFIAATIHLNKLEREEH 474
Query: 479 LVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
LVAAFQYFDKDGSG+IT+DELQQAC EH M DV LEDII+EVDQ+NDG+IDYGEFV MMQ
Sbjct: 475 LVAAFQYFDKDGSGFITIDELQQACVEHGMADVFLEDIIKEVDQNNDGKIDYGEFVEMMQ 534
Query: 539 KGNVGLGRRTMRNSLNMSMRDA 560
KGN G+GRRTMRNSLN+SMRDA
Sbjct: 535 KGNAGVGRRTMRNSLNISMRDA 556
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q38872|CDPK6_ARATH Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/560 (83%), Positives = 506/560 (90%), Gaps = 16/560 (2%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENP 60
MGN+CRGSF K+Y+G +HS + + ++ T S +P+ + Q+FSK+N
Sbjct: 1 MGNSCRGSFKDKIYEG-----NHSRPEENSKSTTTTVSSVHSPTTD------QDFSKQN- 48
Query: 61 KKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTE 120
+ P + K+ IMRR +DNQ+YYVLGHKT NIRDLYTL RKLGQGQFGTTYLCT+
Sbjct: 49 ----TNPALVIPVKEPIMRRNVDNQSYYVLGHKTPNIRDLYTLSRKLGQGQFGTTYLCTD 104
Query: 121 IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180
IATG+++ACKSISKRKLIS+EDVEDVRREIQIMHHLAGHKNIVTIKGAYED L VHIVME
Sbjct: 105 IATGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVME 164
Query: 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240
LCAGGELFDRII RGHYSERKAAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF
Sbjct: 165 LCAGGELFDRIIHRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 224
Query: 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP 300
SLKAIDFGLSVFFKPGQIF DVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP
Sbjct: 225 SLKAIDFGLSVFFKPGQIFKDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP 284
Query: 301 FWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360
FWAETQQGIFDAVLKG+IDF++DPWP+ISDSAKDLIRKMLCS PSERLTAHEVL HPWIC
Sbjct: 285 FWAETQQGIFDAVLKGYIDFDTDPWPVISDSAKDLIRKMLCSSPSERLTAHEVLRHPWIC 344
Query: 361 ENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSG 420
ENGVAPDR+LDPAVLSRLKQFSAMNKLKKMAL+VIAESLSEEEIAGL+ MF+AMDTDNSG
Sbjct: 345 ENGVAPDRALDPAVLSRLKQFSAMNKLKKMALKVIAESLSEEEIAGLRAMFEAMDTDNSG 404
Query: 421 AITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 480
AITFDELKAGLRRYGSTLKDTEIRDLM+AADVDNSGTIDY EFIAAT+HLNKLEREEHLV
Sbjct: 405 AITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYSEFIAATIHLNKLEREEHLV 464
Query: 481 AAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540
+AFQYFDKDGSGYIT+DELQQ+C EH MTDV LEDII+EVDQDNDGRIDY EFVAMMQKG
Sbjct: 465 SAFQYFDKDGSGYITIDELQQSCIEHGMTDVFLEDIIKEVDQDNDGRIDYEEFVAMMQKG 524
Query: 541 NVGLGRRTMRNSLNMSMRDA 560
N G+GRRTM+NSLN+SMRD
Sbjct: 525 NAGVGRRTMKNSLNISMRDV 544
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Functions in abscisic acid (ABA) regulation of guard cell S-type anion-and Ca(2+)-permeable channels and stomatal closure. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SZM3|CDPKQ_ARATH Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/487 (87%), Positives = 457/487 (93%), Gaps = 3/487 (0%)
Query: 78 MRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL 137
M+ NQ YVLG KT +IRDLY+LG KLGQGQFGTTY+C EI+TG E+ACKSI+KRKL
Sbjct: 1 MKHSGGNQACYVLGQKTPSIRDLYSLGHKLGQGQFGTTYMCKEISTGREYACKSITKRKL 60
Query: 138 ISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHY 197
IS+EDVEDVRREIQIMHHLAG+KNIVTIKGAYED L VHIVMELC+GGELFDRIIQRGHY
Sbjct: 61 ISKEDVEDVRREIQIMHHLAGYKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHY 120
Query: 198 SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257
SERKAAEL +IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ
Sbjct: 121 SERKAAELIKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 180
Query: 258 IFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH 317
IF DVVGSPYYVAPEVLLKHYGPEADVWTAGVILYIL+SGVPPFWAETQQGIFDAVLKGH
Sbjct: 181 IFEDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILVSGVPPFWAETQQGIFDAVLKGH 240
Query: 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSR 377
IDF+SDPWPLISDSAK+LIR MLCS+PSERLTAH+VL HPWICENGVAPDR+LDPAVLSR
Sbjct: 241 IDFDSDPWPLISDSAKNLIRGMLCSRPSERLTAHQVLRHPWICENGVAPDRALDPAVLSR 300
Query: 378 LKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST 437
LKQFSAMNKLK+MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST
Sbjct: 301 LKQFSAMNKLKQMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST 360
Query: 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVD 497
LKDTEIRDLM+AAD+D SGTIDYGEFIAAT+HLNKLEREEHL++AF+YFDKDGSGYIT+D
Sbjct: 361 LKDTEIRDLMEAADIDKSGTIDYGEFIAATIHLNKLEREEHLLSAFRYFDKDGSGYITID 420
Query: 498 ELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSM 557
ELQ ACAE M+DV LED+I+EVDQDNDGRIDYGEFVAMMQKG VG RTMR S+NMS+
Sbjct: 421 ELQHACAEQGMSDVFLEDVIKEVDQDNDGRIDYGEFVAMMQKGIVG---RTMRKSINMSI 477
Query: 558 RDAPGSQ 564
R+ SQ
Sbjct: 478 RNNAVSQ 484
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P53684|CDPKB_ORYSJ Calcium-dependent protein kinase isoform 11 OS=Oryza sativa subsp. japonica GN=CPK11 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/503 (75%), Positives = 437/503 (86%), Gaps = 2/503 (0%)
Query: 61 KKDNSAPRISPSKKD--NIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLC 118
K D++ P ++ K +I+RRG+D + VLG KT ++R+ Y +GRKLGQGQFGTTYLC
Sbjct: 37 KFDDTWPEVNNFKPTAASILRRGLDPTSINVLGRKTADLREHYIIGRKLGQGQFGTTYLC 96
Query: 119 TEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178
TEI TG E+ACK+I KRKLI++EDVEDVRREIQIMHHL+GHKN+V IK YED VHIV
Sbjct: 97 TEINTGCEYACKTIPKRKLITKEDVEDVRREIQIMHHLSGHKNVVAIKDVYEDGQAVHIV 156
Query: 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238
MELCAGGELFDRI ++GHYSERKAAEL RIIV +V CHSLGVMHRDLKPENFLL++KDD
Sbjct: 157 MELCAGGELFDRIQEKGHYSERKAAELIRIIVSIVAMCHSLGVMHRDLKPENFLLLDKDD 216
Query: 239 DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGV 298
D S+KAIDFGLSVFFKPGQ+FT++VGSPYYVAPEVL K YGPE+DVW+AGVILY+LLSGV
Sbjct: 217 DLSIKAIDFGLSVFFKPGQVFTELVGSPYYVAPEVLHKRYGPESDVWSAGVILYVLLSGV 276
Query: 299 PPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
PPFWAETQQGIFDAVLKGHIDF+SDPWP ISDSAKDLIRKML PSERL AHEVL HPW
Sbjct: 277 PPFWAETQQGIFDAVLKGHIDFQSDPWPKISDSAKDLIRKMLSHCPSERLKAHEVLRHPW 336
Query: 359 ICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDN 418
ICENGVA D++LDP+V+SRLKQFSAMNKLKK+ALRVIAE LSEEEIAGL+EMFKA+DT N
Sbjct: 337 ICENGVATDQALDPSVISRLKQFSAMNKLKKLALRVIAERLSEEEIAGLREMFKAVDTKN 396
Query: 419 SGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEH 478
G ITF EL+ GLRR+G+ KDTEI D+M+AA DN+ TI Y EFIAAT+ LNK+EREEH
Sbjct: 397 RGVITFGELREGLRRFGAEFKDTEIGDIMEAAHNDNNVTIHYEEFIAATLPLNKIEREEH 456
Query: 479 LVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
L+AAF YFDKDGSGYITVD+LQ+AC EHNM D LLE+II EVDQ+NDG+IDY EFVAMMQ
Sbjct: 457 LLAAFTYFDKDGSGYITVDKLQRACGEHNMEDSLLEEIISEVDQNNDGQIDYAEFVAMMQ 516
Query: 539 KGNVGLGRRTMRNSLNMSMRDAP 561
NVGLG +TM +SLN+++RDAP
Sbjct: 517 GSNVGLGWQTMESSLNVALRDAP 539
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q38870|CDPK2_ARATH Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/549 (65%), Positives = 436/549 (79%), Gaps = 5/549 (0%)
Query: 12 KLYQGYSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISP 71
K+ S+ E SKR ++ T S + + E + E + + P+ P
Sbjct: 100 KVVPEESKQEVPPEESKREVVVQPESAKPETKSESKPETTKPETTSETKPETKAEPQ-KP 158
Query: 72 SKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKS 131
+ G+ +T VL KT+N ++ Y+LGRKLGQGQFGTT+LC E TG E+ACKS
Sbjct: 159 KHMRRVSSAGL--RTESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKS 216
Query: 132 ISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRI 191
ISKRKL++ EDVEDVRREIQIMHHLAGH N+++IKGAYED + VH+VMELC+GGELFDRI
Sbjct: 217 ISKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRI 276
Query: 192 IQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251
IQRGHY+ERKAAEL R IVGV+EACHSLGVMHRDLKPENFL V++++D LK IDFGLS+
Sbjct: 277 IQRGHYTERKAAELARTIVGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSM 336
Query: 252 FFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFD 311
FFKP ++FTDVVGSPYYVAPEVL K YGPE+DVW+AGVI+YILLSGVPPFWAET+QGIF+
Sbjct: 337 FFKPDEVFTDVVGSPYYVAPEVLRKRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFE 396
Query: 312 AVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLD 371
VL G +DF SDPWP IS+SAKDL+RKML P RLTAH+VLCHPW+ +GVAPD+ LD
Sbjct: 397 QVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLD 456
Query: 372 PAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGL 431
AVLSR+KQFSAMNK KKMALRVIAESLSEEEIAGLK+MFK +D DNSG ITF+ELKAGL
Sbjct: 457 SAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGL 516
Query: 432 RRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGS 491
+R G+ LK++EI DLM AADVDNSGTIDY EFIAAT+HLNK+ERE+HL AAF YFDKD S
Sbjct: 517 KRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKDES 576
Query: 492 GYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV--GLGRRTM 549
G+IT DELQQAC E + D +E+++R+VDQD DGRIDY EFVAMMQKG++ G + +
Sbjct: 577 GFITPDELQQACEEFGVEDARIEEMMRDVDQDKDGRIDYNEFVAMMQKGSIMGGPVKMGL 636
Query: 550 RNSLNMSMR 558
NS+++S++
Sbjct: 637 ENSISISLK 645
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q06850|CDPK1_ARATH Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/476 (74%), Positives = 409/476 (85%), Gaps = 2/476 (0%)
Query: 85 QTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE 144
+T VL KT+N ++ Y+LGRKLGQGQFGTT+LC E TG EFACKSI+KRKL++ EDVE
Sbjct: 134 RTESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACKSIAKRKLLTDEDVE 193
Query: 145 DVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE 204
DVRREIQIMHHLAGH N+++IKGAYED + VH+VME CAGGELFDRIIQRGHY+ERKAAE
Sbjct: 194 DVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRIIQRGHYTERKAAE 253
Query: 205 LTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264
LTR IVGVVEACHSLGVMHRDLKPENFL V+K +D LK IDFGLS+FFKP +FTDVVG
Sbjct: 254 LTRTIVGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGLSMFFKPDDVFTDVVG 313
Query: 265 SPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP 324
SPYYVAPEVL K YGPEADVW+AGVI+YILLSGVPPFWAET+QGIF+ VL G +DF SDP
Sbjct: 314 SPYYVAPEVLRKRYGPEADVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDP 373
Query: 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAM 384
WP IS+SAKDL+RKML P +RLTAH+VLCHPW+ +GVAPD+ LD AVLSR+KQFSAM
Sbjct: 374 WPSISESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAM 433
Query: 385 NKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIR 444
NK KKMALRVIAESLSEEEIAGLKEMF +D D SG ITF+ELKAGL+R G+ LK++EI
Sbjct: 434 NKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEIL 493
Query: 445 DLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACA 504
DLM AADVDNSGTIDY EFIAAT+HLNK+ERE+HL AAF YFDKDGSGYIT DELQQAC
Sbjct: 494 DLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACE 553
Query: 505 EHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLG--RRTMRNSLNMSMR 558
E + DV +E+++R+VDQDNDGRIDY EFVAMMQKG++ G + + S +++++
Sbjct: 554 EFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSITGGPVKMGLEKSFSIALK 609
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Phosphorylates the Ca(2+)-ATPase ACA2 resulting in the inhibition of its calcium activation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P53682|CDPK1_ORYSJ Calcium-dependent protein kinase isoform 1 OS=Oryza sativa subsp. japonica GN=SPK PE=2 SV=2 | Back alignment and function description |
|---|
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/532 (65%), Positives = 428/532 (80%), Gaps = 6/532 (1%)
Query: 33 SDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNI---MRRGIDNQTYYV 89
+ C N Y NS + + F+ +++ S S + ++ +R+G+ N V
Sbjct: 3 NSCQNGTYGNNYQNSNRFQNDRFASRYVDGNDTEDCYSGSSRASLAGALRQGL-NLKSPV 61
Query: 90 LGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRRE 149
LG+KT N+R+LYTLGR+LGQGQFG TYLCTEI+TG ++ACK+I K L D+EDVRRE
Sbjct: 62 LGYKTPNVRELYTLGRELGQGQFGKTYLCTEISTGCQYACKTILKSNLRCVSDIEDVRRE 121
Query: 150 IQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII 209
IQIMHHL+G KNIVTIK YED VHIVMELCAGGELF +I +RGHYSERKAAEL +II
Sbjct: 122 IQIMHHLSGQKNIVTIKDTYEDEQAVHIVMELCAGGELFSKIQKRGHYSERKAAELIKII 181
Query: 210 VGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV 269
VG++E CHS GVMHRDLKPENFLL++ DD+FS+KAIDFGLSVFF+PGQ+F +VVGSPYY+
Sbjct: 182 VGIIETCHSHGVMHRDLKPENFLLLDADDEFSVKAIDFGLSVFFRPGQVFREVVGSPYYI 241
Query: 270 APEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329
APEVL K YGPEAD+WTAGVILY+LL+GVPPFWA+TQ GI++ VL G IDF+S+ WP IS
Sbjct: 242 APEVLEKRYGPEADIWTAGVILYVLLTGVPPFWADTQSGIYEKVLDGRIDFKSNRWPRIS 301
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKK 389
DSAKDLI+KMLC PSERL AHEVL HPWIC+NGVA +R+LDP+VL RLKQFSAMN+LKK
Sbjct: 302 DSAKDLIKKMLCPYPSERLKAHEVLKHPWICDNGVATNRALDPSVLPRLKQFSAMNRLKK 361
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA 449
++L++IAE LSEEEI GL+EMFKAMDT N +TF ELK GL+RY S KDTEI DLM+A
Sbjct: 362 LSLQIIAERLSEEEIVGLREMFKAMDTKNRSVVTFGELK-GLKRYSSVFKDTEINDLMEA 420
Query: 450 ADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMT 509
AD D + TI++ EFIAA V LNK+ERE+HL+AAF YFDKDGSG+ITVD+LQ+AC E NM
Sbjct: 421 AD-DTTSTINWEEFIAAAVSLNKIEREKHLMAAFTYFDKDGSGFITVDKLQKACMERNME 479
Query: 510 DVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAP 561
D LE++I EVDQ+NDG+IDY EFV MMQ N GLG +T+ +SLN+++R+AP
Sbjct: 480 DTFLEEMILEVDQNNDGQIDYAEFVTMMQSNNFGLGWQTVESSLNVALREAP 531
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P28583|CDPK_SOYBN Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1 | Back alignment and function description |
|---|
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/475 (73%), Positives = 403/475 (84%), Gaps = 2/475 (0%)
Query: 88 YVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR 147
+VL +T NIR++Y +GRKLGQGQFGTT+ CT A+G +FACKSI KRKL+ +ED EDV
Sbjct: 21 WVLPQRTQNIREVYEVGRKLGQGQFGTTFECTRRASGGKFACKSIPKRKLLCKEDYEDVW 80
Query: 148 REIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTR 207
REIQIMHHL+ H N+V I+G YEDS VH+VMELC GGELFDRI+Q+GHYSER+AA L +
Sbjct: 81 REIQIMHHLSEHANVVRIEGTYEDSTAVHLVMELCEGGELFDRIVQKGHYSERQAARLIK 140
Query: 208 IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY 267
IV VVEACHSLGVMHRDLKPENFL D+D LKA DFGLSVF+KPG+ F DVVGSPY
Sbjct: 141 TIVEVVEACHSLGVMHRDLKPENFLFDTIDEDAKLKATDFGLSVFYKPGESFCDVVGSPY 200
Query: 268 YVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327
YVAPEVL K YGPE+DVW+AGVILYILLSGVPPFWAE++ GIF +L G +DF S+PWP
Sbjct: 201 YVAPEVLRKLYGPESDVWSAGVILYILLSGVPPFWAESEPGIFRQILLGKLDFHSEPWPS 260
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKL 387
ISDSAKDLIRKML P RLTAHEVL HPWI ++ +APD+ LD AVLSRLKQFSAMNKL
Sbjct: 261 ISDSAKDLIRKMLDQNPKTRLTAHEVLRHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKL 320
Query: 388 KKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLM 447
KKMALRVIAE LSEEEI GLKE+FK +DTDNSG ITFDELK GL+R GS L ++EI+DLM
Sbjct: 321 KKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLM 380
Query: 448 DAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN 507
DAAD+D SGTIDYGEFIAATVHLNKLEREE+LV+AF YFDKDGSGYIT+DE+QQAC +
Sbjct: 381 DAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG 440
Query: 508 MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPG 562
+ D+ ++D+I+E+DQDNDG+IDYGEF AMM+KGN G+GRRTMR +LN +RDA G
Sbjct: 441 LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMRKTLN--LRDALG 493
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Glycine max (taxid: 3847) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 564 | ||||||
| 225428322 | 561 | PREDICTED: calcium-dependent protein kin | 0.992 | 0.998 | 0.905 | 0.0 | |
| 224131906 | 560 | calcium dependent protein kinase 6 [Popu | 0.984 | 0.991 | 0.894 | 0.0 | |
| 147864481 | 561 | hypothetical protein VITISV_017368 [Viti | 0.992 | 0.998 | 0.902 | 0.0 | |
| 224104811 | 565 | calcium dependent protein kinase 5 [Popu | 0.984 | 0.982 | 0.888 | 0.0 | |
| 255559179 | 561 | calcium-dependent protein kinase, putati | 0.991 | 0.996 | 0.892 | 0.0 | |
| 449454305 | 566 | PREDICTED: calcium-dependent protein kin | 0.992 | 0.989 | 0.882 | 0.0 | |
| 20453015 | 558 | calmodulin-like-domain protein kinase CP | 0.985 | 0.996 | 0.872 | 0.0 | |
| 20453013 | 571 | phloem calmodulin-like-domain protein ki | 0.998 | 0.985 | 0.863 | 0.0 | |
| 356551652 | 558 | PREDICTED: calcium-dependent protein kin | 0.982 | 0.992 | 0.855 | 0.0 | |
| 164430467 | 553 | calcium-dependent protein kinase [Swains | 0.980 | 1.0 | 0.858 | 0.0 |
| >gi|225428322|ref|XP_002282994.1| PREDICTED: calcium-dependent protein kinase 4 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/563 (90%), Positives = 536/563 (95%), Gaps = 3/563 (0%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENP 60
MGNTCRGSF GK +QGY QPE+ S SKRN SD +NSDYS SLNSQQLVSQEF+KENP
Sbjct: 1 MGNTCRGSFRGKYFQGYGQPEEQST-SKRN--SDRSNSDYSPSSLNSQQLVSQEFAKENP 57
Query: 61 KKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTE 120
KK+ +SP+ KD MRRG+DNQ+YYVLGHKT NIRDLY+LGRKLGQGQFGTTYLCT+
Sbjct: 58 KKETRVSILSPTNKDGTMRRGVDNQSYYVLGHKTANIRDLYSLGRKLGQGQFGTTYLCTD 117
Query: 121 IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180
+ATGIE+ACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED L VHIVME
Sbjct: 118 MATGIEYACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVME 177
Query: 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240
LCAGGELFDRIIQRGHYSERKAAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF
Sbjct: 178 LCAGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 237
Query: 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP 300
SLKAIDFGLSVFFKPGQ+FTDVVGSPYYVAPEVL KHYGPEADVWTAGVILYILLSGVPP
Sbjct: 238 SLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLCKHYGPEADVWTAGVILYILLSGVPP 297
Query: 301 FWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360
FWAETQQGIFDAVLKG IDFES+PWPLISDSAKDLIRKMLCS+P++RLTAHEVLCHPWIC
Sbjct: 298 FWAETQQGIFDAVLKGFIDFESEPWPLISDSAKDLIRKMLCSRPADRLTAHEVLCHPWIC 357
Query: 361 ENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSG 420
ENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL+EMFKAMDTD+SG
Sbjct: 358 ENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFKAMDTDSSG 417
Query: 421 AITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 480
AITFDELKAGLRRYGSTLK++EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV
Sbjct: 418 AITFDELKAGLRRYGSTLKESEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 477
Query: 481 AAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540
AAFQYFDKDGSGYITVDELQQACAEHNMTDV LEDII+EVDQDNDGRIDY EFVAMMQKG
Sbjct: 478 AAFQYFDKDGSGYITVDELQQACAEHNMTDVFLEDIIKEVDQDNDGRIDYSEFVAMMQKG 537
Query: 541 NVGLGRRTMRNSLNMSMRDAPGS 563
N G+GRRTMRNSLNMSMRDAPG+
Sbjct: 538 NAGIGRRTMRNSLNMSMRDAPGA 560
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224131906|ref|XP_002328137.1| calcium dependent protein kinase 6 [Populus trichocarpa] gi|222837652|gb|EEE76017.1| calcium dependent protein kinase 6 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/567 (89%), Positives = 536/567 (94%), Gaps = 12/567 (2%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHS----NNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFS 56
MGNTCRGSF GKLYQGY+QP++ S +NSKRN +SD +NS+YS SL Q+L
Sbjct: 1 MGNTCRGSFKGKLYQGYNQPDEQSTTTASNSKRNASSDHSNSEYSISSLTPQEL------ 54
Query: 57 KENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTY 116
NPKKD++ P ISP+KKD IMRRG+DNQ YYVLGHKT NIRDLYTLGRKLGQGQFGTTY
Sbjct: 55 --NPKKDSNLPLISPTKKDTIMRRGVDNQAYYVLGHKTANIRDLYTLGRKLGQGQFGTTY 112
Query: 117 LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176
LCT+I+TGIE+ACKSISKRKLIS+EDVEDVRREIQIMHHLAGHKNIVTIKGAYED L VH
Sbjct: 113 LCTDISTGIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDQLYVH 172
Query: 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK 236
IVMELC+GGELFDRIIQRGHY+ERKAAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNK
Sbjct: 173 IVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNK 232
Query: 237 DDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLS 296
DDDFSLKAIDFGLSVFFKPGQ+FTDVVGSPYYVAPEVLLK YGPEADVWTAGVILYILLS
Sbjct: 233 DDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKQYGPEADVWTAGVILYILLS 292
Query: 297 GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356
GVPPFWAETQQGIFDAVLKG+IDF+SDPWP+ISDSAKDLIRKMLCSQPSERLTAHEVLCH
Sbjct: 293 GVPPFWAETQQGIFDAVLKGYIDFDSDPWPVISDSAKDLIRKMLCSQPSERLTAHEVLCH 352
Query: 357 PWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDT 416
PWI +NGVAPDR+LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDT
Sbjct: 353 PWINDNGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDT 412
Query: 417 DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476
DNSGAITFDELKAGLRRYGSTLKD EIRDLMDAADVDNSGTIDYGEF+AATVHLNKLERE
Sbjct: 413 DNSGAITFDELKAGLRRYGSTLKDVEIRDLMDAADVDNSGTIDYGEFVAATVHLNKLERE 472
Query: 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAM 536
EHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDII+EVDQDNDGRIDYGEFVAM
Sbjct: 473 EHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIKEVDQDNDGRIDYGEFVAM 532
Query: 537 MQKGNVGLGRRTMRNSLNMSMRDAPGS 563
MQKGN G+GRRTMRNSLNMSMRDAPG+
Sbjct: 533 MQKGNAGIGRRTMRNSLNMSMRDAPGA 559
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147864481|emb|CAN78387.1| hypothetical protein VITISV_017368 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/563 (90%), Positives = 535/563 (95%), Gaps = 3/563 (0%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENP 60
MGNTCRGSF GK +QGY QPE+ S SKRN SD +NSDYS SLNSQQLVSQEF+KENP
Sbjct: 1 MGNTCRGSFRGKYFQGYGQPEEQST-SKRN--SDRSNSDYSPSSLNSQQLVSQEFAKENP 57
Query: 61 KKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTE 120
KK+ +SP+ KD MRRG+DNQ+YYVLGHKT NIRDLY+LGRKLGQGQFGTT LCT+
Sbjct: 58 KKETRVSILSPTNKDGTMRRGVDNQSYYVLGHKTANIRDLYSLGRKLGQGQFGTTXLCTD 117
Query: 121 IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180
+ATGIE+ACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED L VHIVME
Sbjct: 118 MATGIEYACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVME 177
Query: 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240
LCAGGELFDRIIQRGHYSER+AAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF
Sbjct: 178 LCAGGELFDRIIQRGHYSERRAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 237
Query: 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP 300
SLKAIDFGLSVFFKPGQ+FTDVVGSPYYVAPEVL KHYGPEADVWTAGVILYILLSGVPP
Sbjct: 238 SLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLCKHYGPEADVWTAGVILYILLSGVPP 297
Query: 301 FWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360
FWAETQQGIFDAVLKG IDFES+PWPLISDSAKDLIRKMLCS+P++RLTAHEVLCHPWIC
Sbjct: 298 FWAETQQGIFDAVLKGFIDFESEPWPLISDSAKDLIRKMLCSRPADRLTAHEVLCHPWIC 357
Query: 361 ENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSG 420
ENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL+EMFKAMDTD+SG
Sbjct: 358 ENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFKAMDTDSSG 417
Query: 421 AITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 480
AITFDELKAGLRRYGSTLK++EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV
Sbjct: 418 AITFDELKAGLRRYGSTLKESEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 477
Query: 481 AAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540
AAFQYFDKDGSGYITVDELQQACAEHNMTDV LEDII+EVDQDNDGRIDY EFVAMMQKG
Sbjct: 478 AAFQYFDKDGSGYITVDELQQACAEHNMTDVFLEDIIKEVDQDNDGRIDYSEFVAMMQKG 537
Query: 541 NVGLGRRTMRNSLNMSMRDAPGS 563
N G+GRRTMRNSLNMSMRDAPG+
Sbjct: 538 NAGIGRRTMRNSLNMSMRDAPGA 560
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224104811|ref|XP_002313574.1| calcium dependent protein kinase 5 [Populus trichocarpa] gi|222849982|gb|EEE87529.1| calcium dependent protein kinase 5 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1049 bits (2713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/567 (88%), Positives = 532/567 (93%), Gaps = 12/567 (2%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHS----NNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFS 56
MGNTCRGSF G L+QGY+QP++ S +NSKR+ +SD +NS++S SL SQ+L
Sbjct: 1 MGNTCRGSFKGILHQGYNQPDEQSTVTASNSKRHASSDHSNSEHSFSSLTSQEL------ 54
Query: 57 KENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTY 116
PKKD++ P ISP+KKD IMRR +DNQ YYVLGHKT NIRDLYTLGRKLGQGQFGTTY
Sbjct: 55 --TPKKDSNLPLISPTKKDTIMRRSVDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTY 112
Query: 117 LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176
LCTEI TG+++ACKSI KRKLIS+EDVEDVRREIQIMHHLAGHKNIVTIKGAYED L VH
Sbjct: 113 LCTEILTGMDYACKSICKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVH 172
Query: 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK 236
IVMELC+GGELFDRIIQRGHYSERKAAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNK
Sbjct: 173 IVMELCSGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNK 232
Query: 237 DDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLS 296
DDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLS
Sbjct: 233 DDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLS 292
Query: 297 GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356
GVPPFWAETQQGIFDAVLKG+IDF+SDPWPLISDSAKDLIRKMLCS PSERLTAHEVLCH
Sbjct: 293 GVPPFWAETQQGIFDAVLKGYIDFDSDPWPLISDSAKDLIRKMLCSSPSERLTAHEVLCH 352
Query: 357 PWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDT 416
PWICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMF AMDT
Sbjct: 353 PWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFMAMDT 412
Query: 417 DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476
DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDY EF+AATVHLNKLERE
Sbjct: 413 DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYKEFVAATVHLNKLERE 472
Query: 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAM 536
EHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDII+EVDQDNDGRIDYGEFVAM
Sbjct: 473 EHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIKEVDQDNDGRIDYGEFVAM 532
Query: 537 MQKGNVGLGRRTMRNSLNMSMRDAPGS 563
MQKGN G+GRRTMRNSLNMSMRDAPG+
Sbjct: 533 MQKGNAGIGRRTMRNSLNMSMRDAPGA 559
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255559179|ref|XP_002520611.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223540210|gb|EEF41784.1| calcium-dependent protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1046 bits (2706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/566 (89%), Positives = 536/566 (94%), Gaps = 7/566 (1%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHS--NNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKE 58
MGNTCRGSF GKLYQGYSQPED S +++ RN +S+ +N+++S S+ +QEF+K+
Sbjct: 1 MGNTCRGSFKGKLYQGYSQPEDQSTASHTNRNPSSNNSNTEHSPTSV-----TAQEFAKD 55
Query: 59 NPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLC 118
NPKKDN+ P ISP++KD IMRRG DNQ+YYVLGHKT NIRDLYTLGRKLGQGQFGTTYLC
Sbjct: 56 NPKKDNNFPLISPNRKDLIMRRGADNQSYYVLGHKTANIRDLYTLGRKLGQGQFGTTYLC 115
Query: 119 TEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178
E +TG E+ACKSISKRKLIS+EDVEDVRREIQIMHHLAGHKNIVTIKGAYED L VHIV
Sbjct: 116 VENSTGTEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDQLYVHIV 175
Query: 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238
MELC+GGELFDRIIQRGHYSERKAAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNKDD
Sbjct: 176 MELCSGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 235
Query: 239 DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGV 298
DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGV
Sbjct: 236 DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGV 295
Query: 299 PPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
PPFWAETQQGIFDAVLKG+IDFESDPWPLISDSAKDLI KMLC +PS+RLTAHEVLCHPW
Sbjct: 296 PPFWAETQQGIFDAVLKGYIDFESDPWPLISDSAKDLIHKMLCGRPSDRLTAHEVLCHPW 355
Query: 359 ICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDN 418
ICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL+EMF+ MDTDN
Sbjct: 356 ICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQTMDTDN 415
Query: 419 SGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEH 478
SGAITFDELKAGLRRYGST+KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEH
Sbjct: 416 SGAITFDELKAGLRRYGSTMKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEH 475
Query: 479 LVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
LVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDY EFVAMMQ
Sbjct: 476 LVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYSEFVAMMQ 535
Query: 539 KGNVGLGRRTMRNSLNMSMRDAPGSQ 564
KGN G+GRRTMRNSLNMSMRDAPG+Q
Sbjct: 536 KGNAGIGRRTMRNSLNMSMRDAPGAQ 561
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449454305|ref|XP_004144896.1| PREDICTED: calcium-dependent protein kinase 4-like [Cucumis sativus] gi|449471982|ref|XP_004153460.1| PREDICTED: calcium-dependent protein kinase 4-like [Cucumis sativus] gi|449530458|ref|XP_004172212.1| PREDICTED: calcium-dependent protein kinase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/568 (88%), Positives = 531/568 (93%), Gaps = 8/568 (1%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHSN-NSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKEN 59
MGNTCRGSF G ++QGYSQPED S NSKRNTN T++D+S S+++ L+SQEF+KEN
Sbjct: 1 MGNTCRGSFKGNIFQGYSQPEDSSTPNSKRNTN---TSADHSPSSISTNNLISQEFAKEN 57
Query: 60 PKK----DNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTT 115
K D + +SP+KKD MR+ +NQ YYVLGHKT NIRDLYTLGRKLGQGQFGTT
Sbjct: 58 KIKSKDNDCNPTFLSPTKKDYTMRKSAENQAYYVLGHKTANIRDLYTLGRKLGQGQFGTT 117
Query: 116 YLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175
YLCTEI TGIE+ACKSISKRKLI++EDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL V
Sbjct: 118 YLCTEITTGIEYACKSISKRKLIAKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLYV 177
Query: 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN 235
HIVMELC+GGELFDRIIQRGHYSERKAAELTRIIVGVVE CHSLGVMHRDLKPENFLLVN
Sbjct: 178 HIVMELCSGGELFDRIIQRGHYSERKAAELTRIIVGVVETCHSLGVMHRDLKPENFLLVN 237
Query: 236 KDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILL 295
KDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGP ADVWTAGVILYILL
Sbjct: 238 KDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPAADVWTAGVILYILL 297
Query: 296 SGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355
SGVPPFWAETQQGIFDAVLKGHIDF+SDPWPLISDSAKDLIRKMLCS+PS+RLTAHEVLC
Sbjct: 298 SGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKDLIRKMLCSRPSDRLTAHEVLC 357
Query: 356 HPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMD 415
HPWICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL+EMF AMD
Sbjct: 358 HPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFTAMD 417
Query: 416 TDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475
TDNSGAITFDELKAGLRRYGSTLKD EIRDLMDAAD+DNSGTIDYGEFIAAT+HLNKLER
Sbjct: 418 TDNSGAITFDELKAGLRRYGSTLKDIEIRDLMDAADIDNSGTIDYGEFIAATIHLNKLER 477
Query: 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVA 535
EEHLVAAF+YFDKDGSGYITVDELQQACAEHNMTDV LEDIIREVDQDNDGRIDYGEFVA
Sbjct: 478 EEHLVAAFRYFDKDGSGYITVDELQQACAEHNMTDVYLEDIIREVDQDNDGRIDYGEFVA 537
Query: 536 MMQKGNVGLGRRTMRNSLNMSMRDAPGS 563
MMQKGN G+GRRTMRNSLN+SMRD PG+
Sbjct: 538 MMQKGNAGIGRRTMRNSLNLSMRDGPGA 565
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|20453015|gb|AAL68972.1| calmodulin-like-domain protein kinase CPK2 [Cucurbita maxima] | Back alignment and taxonomy information |
|---|
Score = 1026 bits (2654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/564 (87%), Positives = 521/564 (92%), Gaps = 8/564 (1%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHSN-NSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKEN 59
MGNTCRGSF G ++QGYSQPE+ S N KRN N +SD+S S+N+ L+SQ F++EN
Sbjct: 1 MGNTCRGSFKGNIFQGYSQPEESSTPNFKRNING---SSDHSPSSINTNNLISQAFAEEN 57
Query: 60 PKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCT 119
K + KKD MR+ +NQ YYVLGHKT NIRDLYTLGRKLGQGQFGTTYLCT
Sbjct: 58 KTKSKD----NDCKKDYTMRKSAENQAYYVLGHKTANIRDLYTLGRKLGQGQFGTTYLCT 113
Query: 120 EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179
EI TGIE+ACKSISKRKLI++EDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL VHIVM
Sbjct: 114 EIMTGIEYACKSISKRKLIAKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLYVHIVM 173
Query: 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD 239
ELC+GGELFDRIIQRGHYSERKAAELTRIIVGVVE CHSLGVMHRDLKPENFLLVNKDDD
Sbjct: 174 ELCSGGELFDRIIQRGHYSERKAAELTRIIVGVVETCHSLGVMHRDLKPENFLLVNKDDD 233
Query: 240 FSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVP 299
FSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGP ADVWTAGVILYILLSGVP
Sbjct: 234 FSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPAADVWTAGVILYILLSGVP 293
Query: 300 PFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
PFWAETQQGIFDAVLKGHIDF+SDPWPLISDSAKDLIRKMLCS+PS+RLTAHEVLCHPWI
Sbjct: 294 PFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKDLIRKMLCSRPSDRLTAHEVLCHPWI 353
Query: 360 CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNS 419
CENGVAPDR+LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL+EMF AMDTDNS
Sbjct: 354 CENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFTAMDTDNS 413
Query: 420 GAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHL 479
GAITFDELKAGLRRYGSTLKDTEIRDLM+AAD+DNSGTIDYGEFIAAT+HLNKLEREEHL
Sbjct: 414 GAITFDELKAGLRRYGSTLKDTEIRDLMEAADIDNSGTIDYGEFIAATIHLNKLEREEHL 473
Query: 480 VAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
VAAF+YFDKDGSGYITVDELQQACAEHNMTD LEDIIREVDQDNDGRIDY EFVAMMQK
Sbjct: 474 VAAFRYFDKDGSGYITVDELQQACAEHNMTDAYLEDIIREVDQDNDGRIDYSEFVAMMQK 533
Query: 540 GNVGLGRRTMRNSLNMSMRDAPGS 563
GN G+GRRTMRNSLN+SMRD PG+
Sbjct: 534 GNAGIGRRTMRNSLNLSMRDGPGA 557
|
Source: Cucurbita maxima Species: Cucurbita maxima Genus: Cucurbita Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|20453013|gb|AAL68971.1| phloem calmodulin-like-domain protein kinase PCPK1 [Cucurbita maxima] | Back alignment and taxonomy information |
|---|
Score = 1023 bits (2646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/570 (86%), Positives = 525/570 (92%), Gaps = 7/570 (1%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHS---NNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSK 57
MGNTCRGSF G ++QGYSQPED S + +++S +NSD S S+N+ L++QEFSK
Sbjct: 1 MGNTCRGSFKGNIFQGYSQPEDSSTLYSKRNNSSSSARSNSDISPTSINTHNLIAQEFSK 60
Query: 58 ENPKK----DNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFG 113
EN K D + +SP+KKD MR+ +NQ YYVLGHKT NIRDLYTLGRKLGQGQFG
Sbjct: 61 ENKTKSKDNDYNQAFLSPTKKDFTMRKSAENQAYYVLGHKTANIRDLYTLGRKLGQGQFG 120
Query: 114 TTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173
TTYLCTEI TGIE+ACKSISKRKLI++EDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL
Sbjct: 121 TTYLCTEITTGIEYACKSISKRKLIAKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 180
Query: 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLL 233
VHIVMELC+GGELFDRII RGHYSERKAAELTRIIVGVVE CHSLGVMHRDLKPENFLL
Sbjct: 181 YVHIVMELCSGGELFDRIIHRGHYSERKAAELTRIIVGVVETCHSLGVMHRDLKPENFLL 240
Query: 234 VNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYI 293
VNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG PYYVAPEVLLKHYGP ADVWTAGVILYI
Sbjct: 241 VNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGRPYYVAPEVLLKHYGPAADVWTAGVILYI 300
Query: 294 LLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEV 353
LLSGVPPFWAETQQGIFDAVLKGHIDF+SDPWPLISDSAKD+IRKMLCS+PS+RLTAHEV
Sbjct: 301 LLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKDIIRKMLCSRPSDRLTAHEV 360
Query: 354 LCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKA 413
LCHPWICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL+EMF A
Sbjct: 361 LCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFTA 420
Query: 414 MDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL 473
MDTDNSGAITFDELKAGLRRYGSTLKD EIRDLMDAAD+DNSGTIDYGEFIAAT+HLNKL
Sbjct: 421 MDTDNSGAITFDELKAGLRRYGSTLKDIEIRDLMDAADIDNSGTIDYGEFIAATIHLNKL 480
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEF 533
EREEHLVAAF+YFDKDGSGYITVDELQQACAEHNMTD LED+IREVDQDNDGRIDYGEF
Sbjct: 481 EREEHLVAAFRYFDKDGSGYITVDELQQACAEHNMTDAYLEDVIREVDQDNDGRIDYGEF 540
Query: 534 VAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563
VAMMQKGN G+GRRTMRNSLN+SMRD PG+
Sbjct: 541 VAMMQKGNAGVGRRTMRNSLNLSMRDGPGA 570
|
Source: Cucurbita maxima Species: Cucurbita maxima Genus: Cucurbita Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356551652|ref|XP_003544188.1| PREDICTED: calcium-dependent protein kinase 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/568 (85%), Positives = 514/568 (90%), Gaps = 14/568 (2%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENP 60
MGNTCRGS GK QG+SQPEDHS KR+T +S PS QQ + + N
Sbjct: 1 MGNTCRGSLKGKYIQGFSQPEDHS---KRSTT-------HSDPSSTKQQDDNDNNNNNNN 50
Query: 61 KKDNSAPRISP----SKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTY 116
+N+ + +K++ IMRRG+DNQ YYVLGHKT NIRDLYTLGRKLGQGQFGTTY
Sbjct: 51 NNNNNNNNNNNLPFNAKREAIMRRGLDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTY 110
Query: 117 LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176
LCTE +T IE+ACKSISKRKLIS+EDVEDVRREIQIMHHLAGHKNIVTIKGAYED L VH
Sbjct: 111 LCTENSTSIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVH 170
Query: 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK 236
IVMELC+GGELFDRIIQRGHY+ERKAAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNK
Sbjct: 171 IVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNK 230
Query: 237 DDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLS 296
DDDFSLKAIDFGLSVFFKPGQ+FTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLS
Sbjct: 231 DDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLS 290
Query: 297 GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356
GVPPFWAETQQGIFDAVLKGHIDF+SDPWPLISDS KDLIRKMLCSQPSERLTAH+VLCH
Sbjct: 291 GVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSGKDLIRKMLCSQPSERLTAHQVLCH 350
Query: 357 PWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDT 416
PWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL+EMF+AMDT
Sbjct: 351 PWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDT 410
Query: 417 DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476
DNSGAITFDELKAGLRRYGSTLKD EIRDLM+AADVD SGTIDYGEFIAAT HLNKLERE
Sbjct: 411 DNSGAITFDELKAGLRRYGSTLKDIEIRDLMEAADVDKSGTIDYGEFIAATFHLNKLERE 470
Query: 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAM 536
EHL+AAFQYFDKDGSGYITVDELQQACAEHNMTD LEDIIREVDQDNDGRIDYGEF AM
Sbjct: 471 EHLIAAFQYFDKDGSGYITVDELQQACAEHNMTDAFLEDIIREVDQDNDGRIDYGEFAAM 530
Query: 537 MQKGNVGLGRRTMRNSLNMSMRDAPGSQ 564
MQKGN G+GRRTMRNSLN+SMRDAP +Q
Sbjct: 531 MQKGNAGIGRRTMRNSLNLSMRDAPSAQ 558
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|164430467|gb|ABY55551.1| calcium-dependent protein kinase [Swainsona canescens] | Back alignment and taxonomy information |
|---|
Score = 995 bits (2573), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/564 (85%), Positives = 512/564 (90%), Gaps = 11/564 (1%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENP 60
MGNTCRGS GK QG+SQPE S++SKR +S SD T + Q + S +N
Sbjct: 1 MGNTCRGSLKGKYIQGFSQPE--SDHSKRTAHSSSDPSDSLTDHHHKQ--IPNSNSAQND 56
Query: 61 KKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTE 120
+ +I+ MRRG DNQ YYVLGHKT NIRDLYTLGRKLGQGQFGTTYLCT+
Sbjct: 57 NNNYLPLKIN-------MRRGSDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTD 109
Query: 121 IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180
+T IE+ACKSISKRKLIS+EDVEDVRREIQIMHHLAGHKNIVTIKGAYED L VHIVME
Sbjct: 110 NSTSIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVME 169
Query: 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240
LC+GGELFDRIIQRGHY+ERKAAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF
Sbjct: 170 LCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 229
Query: 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP 300
SLKAIDFGLSVFFKPGQ+FTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP
Sbjct: 230 SLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP 289
Query: 301 FWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360
FWAETQQGIFDAVLKGHIDF+SDPWPLISDS KDLIRKMLCS+PS+RLTAHEVLCHPWIC
Sbjct: 290 FWAETQQGIFDAVLKGHIDFDSDPWPLISDSGKDLIRKMLCSRPSDRLTAHEVLCHPWIC 349
Query: 361 ENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSG 420
ENGVAPDR+LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL+EMF+AMDTDNSG
Sbjct: 350 ENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSG 409
Query: 421 AITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 480
AITFDELKAGLRRYGSTLKDTEIRDLM+AADVDNSGTIDYGEFIAATVHLNKLEREEHLV
Sbjct: 410 AITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 469
Query: 481 AAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540
AAFQYFDKDGSGYITVDELQQACAEHNMTDV LEDIIREVDQDNDGRIDYGEF AMMQKG
Sbjct: 470 AAFQYFDKDGSGYITVDELQQACAEHNMTDVFLEDIIREVDQDNDGRIDYGEFAAMMQKG 529
Query: 541 NVGLGRRTMRNSLNMSMRDAPGSQ 564
N G+GRRTMRNSLN+SMRDAP +
Sbjct: 530 NPGIGRRTMRNSLNLSMRDAPSAH 553
|
Source: Swainsona canescens Species: Swainsona canescens Genus: Swainsona Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 564 | ||||||
| TAIR|locus:2122063 | 556 | CPK5 "calmodulin-domain protei | 0.982 | 0.996 | 0.841 | 7.6e-254 | |
| TAIR|locus:2827528 | 544 | CPK6 "calcium dependent protei | 0.962 | 0.998 | 0.837 | 1.9e-250 | |
| TAIR|locus:2175503 | 610 | CPK1 "calcium dependent protei | 0.913 | 0.844 | 0.700 | 3.6e-198 | |
| TAIR|locus:2075885 | 646 | CPK2 "calmodulin-domain protei | 0.953 | 0.832 | 0.662 | 1.5e-193 | |
| TAIR|locus:2065021 | 583 | CPK20 "calcium-dependent prote | 0.936 | 0.905 | 0.663 | 5e-190 | |
| TAIR|locus:2136917 | 501 | CPK4 "calcium-dependent protei | 0.838 | 0.944 | 0.707 | 8.5e-184 | |
| TAIR|locus:2014691 | 495 | CDPK2 "AT1G35670" [Arabidopsis | 0.838 | 0.955 | 0.705 | 1.1e-183 | |
| TAIR|locus:2171726 | 490 | CDPK9 "calmodulin-like domain | 0.833 | 0.959 | 0.689 | 6.5e-177 | |
| TAIR|locus:2150225 | 523 | CPK34 "AT5G19360" [Arabidopsis | 0.803 | 0.866 | 0.667 | 2.8e-169 | |
| TAIR|locus:2177023 | 528 | CPK17 "calcium-dependent prote | 0.803 | 0.857 | 0.667 | 7.4e-169 |
| TAIR|locus:2122063 CPK5 "calmodulin-domain protein kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2444 (865.4 bits), Expect = 7.6e-254, P = 7.6e-254
Identities = 473/562 (84%), Positives = 515/562 (91%)
Query: 1 MGNTCRGSFTGKLYQG-YSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKEN 59
MGN+CRGSF KL +G ++PED+S S N +S NSD+S P N+ +++QEFSK+N
Sbjct: 1 MGNSCRGSFKDKLDEGDNNKPEDYSKTSTTNLSS---NSDHS-P--NAADIIAQEFSKDN 54
Query: 60 PKKDNSA-PRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLC 118
+NS P + ++ IMRR DNQ YYVLGHKT NIRD+YTL RKLGQGQFGTTYLC
Sbjct: 55 NSNNNSKDPALVIPLREPIMRRNPDNQAYYVLGHKTPNIRDIYTLSRKLGQGQFGTTYLC 114
Query: 119 TEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178
TEIA+G+++ACKSISKRKLIS+EDVEDVRREIQIMHHLAGH +IVTIKGAYEDSL VHIV
Sbjct: 115 TEIASGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHGSIVTIKGAYEDSLYVHIV 174
Query: 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238
MELCAGGELFDRIIQRGHYSERKAAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNKDD
Sbjct: 175 MELCAGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 234
Query: 239 DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGV 298
DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK YGPEADVWTAGVILYILLSGV
Sbjct: 235 DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKRYGPEADVWTAGVILYILLSGV 294
Query: 299 PPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
PPFWAETQQGIFDAVLKG+IDFESDPWP+ISDSAKDLIR+ML S+P+ERLTAHEVL HPW
Sbjct: 295 PPFWAETQQGIFDAVLKGYIDFESDPWPVISDSAKDLIRRMLSSKPAERLTAHEVLRHPW 354
Query: 359 ICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDN 418
ICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMAL+VIAESLSEEEIAGL+EMF+AMDTDN
Sbjct: 355 ICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALKVIAESLSEEEIAGLREMFQAMDTDN 414
Query: 419 SGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEH 478
SGAITFDELKAGLR+YGSTLKDTEI DLMDAADVDNSGTIDY EFIAAT+HLNKLEREEH
Sbjct: 415 SGAITFDELKAGLRKYGSTLKDTEIHDLMDAADVDNSGTIDYSEFIAATIHLNKLEREEH 474
Query: 479 LVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
LVAAFQYFDKDGSG+IT+DELQQAC EH M DV LEDII+EVDQ+NDG+IDYGEFV MMQ
Sbjct: 475 LVAAFQYFDKDGSGFITIDELQQACVEHGMADVFLEDIIKEVDQNNDGKIDYGEFVEMMQ 534
Query: 539 KGNVGLGRRTMRNSLNMSMRDA 560
KGN G+GRRTMRNSLN+SMRDA
Sbjct: 535 KGNAGVGRRTMRNSLNISMRDA 556
|
|
| TAIR|locus:2827528 CPK6 "calcium dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2412 (854.1 bits), Expect = 1.9e-250, P = 1.9e-250
Identities = 468/559 (83%), Positives = 505/559 (90%)
Query: 1 MGNTCRGSFTGKLYQGYSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENP 60
MGN+CRGSF K+Y+G N+S+ NS T + S S++S Q+FSK+N
Sbjct: 1 MGNSCRGSFKDKIYEG--------NHSRPEENSKSTTTTVS--SVHSPT-TDQDFSKQNT 49
Query: 61 KKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTE 120
P + K+ IMRR +DNQ+YYVLGHKT NIRDLYTL RKLGQGQFGTTYLCT+
Sbjct: 50 N-----PALVIPVKEPIMRRNVDNQSYYVLGHKTPNIRDLYTLSRKLGQGQFGTTYLCTD 104
Query: 121 IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180
IATG+++ACKSISKRKLIS+EDVEDVRREIQIMHHLAGHKNIVTIKGAYED L VHIVME
Sbjct: 105 IATGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVME 164
Query: 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240
LCAGGELFDRII RGHYSERKAAELT+IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF
Sbjct: 165 LCAGGELFDRIIHRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 224
Query: 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP 300
SLKAIDFGLSVFFKPGQIF DVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP
Sbjct: 225 SLKAIDFGLSVFFKPGQIFKDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPP 284
Query: 301 FWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360
FWAETQQGIFDAVLKG+IDF++DPWP+ISDSAKDLIRKMLCS PSERLTAHEVL HPWIC
Sbjct: 285 FWAETQQGIFDAVLKGYIDFDTDPWPVISDSAKDLIRKMLCSSPSERLTAHEVLRHPWIC 344
Query: 361 ENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSG 420
ENGVAPDR+LDPAVLSRLKQFSAMNKLKKMAL+VIAESLSEEEIAGL+ MF+AMDTDNSG
Sbjct: 345 ENGVAPDRALDPAVLSRLKQFSAMNKLKKMALKVIAESLSEEEIAGLRAMFEAMDTDNSG 404
Query: 421 AITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 480
AITFDELKAGLRRYGSTLKDTEIRDLM+AADVDNSGTIDY EFIAAT+HLNKLEREEHLV
Sbjct: 405 AITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYSEFIAATIHLNKLEREEHLV 464
Query: 481 AAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540
+AFQYFDKDGSGYIT+DELQQ+C EH MTDV LEDII+EVDQDNDGRIDY EFVAMMQKG
Sbjct: 465 SAFQYFDKDGSGYITIDELQQSCIEHGMTDVFLEDIIKEVDQDNDGRIDYEEFVAMMQKG 524
Query: 541 NVGLGRRTMRNSLNMSMRD 559
N G+GRRTM+NSLN+SMRD
Sbjct: 525 NAGVGRRTMKNSLNISMRD 543
|
|
| TAIR|locus:2175503 CPK1 "calcium dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1894 (671.8 bits), Expect = 3.6e-198, Sum P(2) = 3.6e-198
Identities = 363/518 (70%), Positives = 423/518 (81%)
Query: 44 SLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMR-RGIDNQTYYVLGHKTDNIRDLYT 102
SL S+ QE E + P P K ++ R +T VL KT+N ++ Y+
Sbjct: 92 SLESKPETKQETKSETKPESKPDPPAKPKKPKHMKRVSSAGLRTESVLQRKTENFKEFYS 151
Query: 103 LGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNI 162
LGRKLGQGQFGTT+LC E TG EFACKSI+KRKL++ EDVEDVRREIQIMHHLAGH N+
Sbjct: 152 LGRKLGQGQFGTTFLCVEKTTGKEFACKSIAKRKLLTDEDVEDVRREIQIMHHLAGHPNV 211
Query: 163 VTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVM 222
++IKGAYED + VH+VME CAGGELFDRIIQRGHY+ERKAAELTR IVGVVEACHSLGVM
Sbjct: 212 ISIKGAYEDVVAVHLVMECCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVM 271
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEA 282
HRDLKPENFL V+K +D LK IDFGLS+FFKP +FTDVVGSPYYVAPEVL K YGPEA
Sbjct: 272 HRDLKPENFLFVSKHEDSLLKTIDFGLSMFFKPDDVFTDVVGSPYYVAPEVLRKRYGPEA 331
Query: 283 DVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342
DVW+AGVI+YILLSGVPPFWAET+QGIF+ VL G +DF SDPWP IS+SAKDL+RKML
Sbjct: 332 DVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVR 391
Query: 343 QPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEE 402
P +RLTAH+VLCHPW+ +GVAPD+ LD AVLSR+KQFSAMNK KKMALRVIAESLSEE
Sbjct: 392 DPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEE 451
Query: 403 EIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGE 462
EIAGLKEMF +D D SG ITF+ELKAGL+R G+ LK++EI DLM AADVDNSGTIDY E
Sbjct: 452 EIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKE 511
Query: 463 FIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQ 522
FIAAT+HLNK+ERE+HL AAF YFDKDGSGYIT DELQQAC E + DV +E+++R+VDQ
Sbjct: 512 FIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQ 571
Query: 523 DNDGRIDYGEFVAMMQKGNVGLG--RRTMRNSLNMSMR 558
DNDGRIDY EFVAMMQKG++ G + + S +++++
Sbjct: 572 DNDGRIDYNEFVAMMQKGSITGGPVKMGLEKSFSIALK 609
|
|
| TAIR|locus:2075885 CPK2 "calmodulin-domain protein kinase cdpk isoform 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1875 (665.1 bits), Expect = 1.5e-193, P = 1.5e-193
Identities = 360/543 (66%), Positives = 434/543 (79%)
Query: 18 SQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNI 77
S+ E SKR ++ T S + + E + E + + P+ P +
Sbjct: 106 SKQEVPPEESKREVVVQPESAKPETKSESKPETTKPETTSETKPETKAEPQ-KPKHMRRV 164
Query: 78 MRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL 137
G+ +T VL KT+N ++ Y+LGRKLGQGQFGTT+LC E TG E+ACKSISKRKL
Sbjct: 165 SSAGL--RTESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKL 222
Query: 138 ISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHY 197
++ EDVEDVRREIQIMHHLAGH N+++IKGAYED + VH+VMELC+GGELFDRIIQRGHY
Sbjct: 223 LTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQRGHY 282
Query: 198 SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257
+ERKAAEL R IVGV+EACHSLGVMHRDLKPENFL V++++D LK IDFGLS+FFKP +
Sbjct: 283 TERKAAELARTIVGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDE 342
Query: 258 IFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH 317
+FTDVVGSPYYVAPEVL K YGPE+DVW+AGVI+YILLSGVPPFWAET+QGIF+ VL G
Sbjct: 343 VFTDVVGSPYYVAPEVLRKRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGD 402
Query: 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSR 377
+DF SDPWP IS+SAKDL+RKML P RLTAH+VLCHPW+ +GVAPD+ LD AVLSR
Sbjct: 403 LDFSSDPWPSISESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSR 462
Query: 378 LKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST 437
+KQFSAMNK KKMALRVIAESLSEEEIAGLK+MFK +D DNSG ITF+ELKAGL+R G+
Sbjct: 463 MKQFSAMNKFKKMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGLKRVGAN 522
Query: 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVD 497
LK++EI DLM AADVDNSGTIDY EFIAAT+HLNK+ERE+HL AAF YFDKD SG+IT D
Sbjct: 523 LKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKDESGFITPD 582
Query: 498 ELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV--GLGRRTMRNSLNM 555
ELQQAC E + D +E+++R+VDQD DGRIDY EFVAMMQKG++ G + + NS+++
Sbjct: 583 ELQQACEEFGVEDARIEEMMRDVDQDKDGRIDYNEFVAMMQKGSIMGGPVKMGLENSISI 642
Query: 556 SMR 558
S++
Sbjct: 643 SLK 645
|
|
| TAIR|locus:2065021 CPK20 "calcium-dependent protein kinase 20" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1827 (648.2 bits), Expect = 5.0e-190, Sum P(2) = 5.0e-190
Identities = 355/535 (66%), Positives = 424/535 (79%)
Query: 22 DHSNNSKRNTNSDCTNSDYSTPSLNSQQL-VSQEFSKENPKKDNSA-PRISPSKKDNIMR 79
D SN +T D S TPS + ++ E P +N P P KK+ M+
Sbjct: 52 DDSNGHVSST-VDPAPSTLPTPSTPPPPVKMANEEPPPKPITENKEDPNSKPQKKEAHMK 110
Query: 80 R--GIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL 137
R Q VLG KT+N++D+Y++GRKLGQGQFGTT+LC + TG EFACK+I+KRKL
Sbjct: 111 RMASAGLQIDSVLGRKTENLKDIYSVGRKLGQGQFGTTFLCVDKKTGKEFACKTIAKRKL 170
Query: 138 ISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHY 197
+ EDVEDVRREIQIMHHL+GH N++ I GAYED++ VH+VME+CAGGELFDRIIQRGHY
Sbjct: 171 TTPEDVEDVRREIQIMHHLSGHPNVIQIVGAYEDAVAVHVVMEICAGGELFDRIIQRGHY 230
Query: 198 SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257
+E+KAAEL RIIVGV+EACHSLGVMHRDLKPENFL V+ D++ +LK IDFGLSVFFKPG+
Sbjct: 231 TEKKAAELARIIVGVIEACHSLGVMHRDLKPENFLFVSGDEEAALKTIDFGLSVFFKPGE 290
Query: 258 IFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH 317
FTDVVGSPYYVAPEVL KHY E DVW+AGVI+YILLSGVPPFW ET+QGIF+ VLKG
Sbjct: 291 TFTDVVGSPYYVAPEVLRKHYSHECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGD 350
Query: 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSR 377
+DF S+PWP +S+SAKDL+R+ML P +R+T HEVLCHPW +GVA D+ LD AVLSR
Sbjct: 351 LDFISEPWPSVSESAKDLVRRMLIRDPKKRMTTHEVLCHPWARVDGVALDKPLDSAVLSR 410
Query: 378 LKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST 437
L+QFSAMNKLKK+A++VIAESLSEEEIAGLKEMFK +DTDNSG IT +ELK GL R G+
Sbjct: 411 LQQFSAMNKLKKIAIKVIAESLSEEEIAGLKEMFKMIDTDNSGHITLEELKKGLDRVGAD 470
Query: 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVD 497
LKD+EI LM AAD+DNSGTIDYGEFIAA VHLNK+E+E+HL AF YFD+DGSGYIT D
Sbjct: 471 LKDSEILGLMQAADIDNSGTIDYGEFIAAMVHLNKIEKEDHLFTAFSYFDQDGSGYITRD 530
Query: 498 ELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNS 552
ELQQAC + + DV L+DI+REVD+DNDGRIDY EFV MMQ + G G+ ++ S
Sbjct: 531 ELQQACKQFGLADVHLDDILREVDKDNDGRIDYSEFVDMMQ--DTGFGKMGLKVS 583
|
|
| TAIR|locus:2136917 CPK4 "calcium-dependent protein kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1783 (632.7 bits), Expect = 8.5e-184, P = 8.5e-184
Identities = 336/475 (70%), Positives = 397/475 (83%)
Query: 89 VLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR 148
VL ++T +RD Y LG+KLGQGQFGTTYLCTE ++ +ACKSI KRKL+ RED EDV R
Sbjct: 13 VLPYETPRLRDHYLLGKKLGQGQFGTTYLCTEKSSSANYACKSIPKRKLVCREDYEDVWR 72
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI 208
EIQIMHHL+ H N+V IKG YEDS+ VHIVME+C GGELFDRI+ +G +SER+AA+L +
Sbjct: 73 EIQIMHHLSEHPNVVRIKGTYEDSVFVHIVMEVCEGGELFDRIVSKGCFSEREAAKLIKT 132
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYY 268
I+GVVEACHSLGVMHRDLKPENFL + DD LKA DFGLSVF+KPGQ DVVGSPYY
Sbjct: 133 ILGVVEACHSLGVMHRDLKPENFLFDSPSDDAKLKATDFGLSVFYKPGQYLYDVVGSPYY 192
Query: 269 VAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328
VAPEVL K YGPE DVW+AGVILYILLSGVPPFWAET+ GIF +L+G IDF+SDPWP I
Sbjct: 193 VAPEVLKKCYGPEIDVWSAGVILYILLSGVPPFWAETESGIFRQILQGKIDFKSDPWPTI 252
Query: 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLK 388
S+ AKDLI KML P +R++AHE LCHPWI + APD+ LDPAVLSRLKQFS MNK+K
Sbjct: 253 SEGAKDLIYKMLDRSPKKRISAHEALCHPWIVDEHAAPDKPLDPAVLSRLKQFSQMNKIK 312
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD 448
KMALRVIAE LSEEEI GLKE+FK +DTDNSG ITF+ELKAGL+R GS L ++EI+ LMD
Sbjct: 313 KMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMD 372
Query: 449 AADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNM 508
AAD+DNSGTIDYGEF+AAT+H+NK+EREE+LV AF YFDKDGSGYIT+DELQQAC E +
Sbjct: 373 AADIDNSGTIDYGEFLAATLHINKMEREENLVVAFSYFDKDGSGYITIDELQQACTEFGL 432
Query: 509 TDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGR-RTMRNSLNMSMRDAPG 562
D L+D+I+E+D DNDG+ID+ EF AMM+KG+ G+GR RTMRN+LN ++ +A G
Sbjct: 433 CDTPLDDMIKEIDLDNDGKIDFSEFTAMMKKGD-GVGRSRTMRNNLNFNIAEAFG 486
|
|
| TAIR|locus:2014691 CDPK2 "AT1G35670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1782 (632.4 bits), Expect = 1.1e-183, P = 1.1e-183
Identities = 335/475 (70%), Positives = 396/475 (83%)
Query: 89 VLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR 148
VL ++T +RD Y LG+KLGQGQFGTTYLCTE +T +ACKSI KRKL+ RED EDV R
Sbjct: 14 VLPYQTPRLRDHYLLGKKLGQGQFGTTYLCTEKSTSANYACKSIPKRKLVCREDYEDVWR 73
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI 208
EIQIMHHL+ H N+V IKG YEDS+ VHIVME+C GGELFDRI+ +GH+SER+A +L +
Sbjct: 74 EIQIMHHLSEHPNVVRIKGTYEDSVFVHIVMEVCEGGELFDRIVSKGHFSEREAVKLIKT 133
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYY 268
I+GVVEACHSLGVMHRDLKPENFL + DD LKA DFGLSVF+KPGQ DVVGSPYY
Sbjct: 134 ILGVVEACHSLGVMHRDLKPENFLFDSPKDDAKLKATDFGLSVFYKPGQYLYDVVGSPYY 193
Query: 269 VAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328
VAPEVL K YGPE DVW+AGVILYILLSGVPPFWAET+ GIF +L+G +DF+SDPWP I
Sbjct: 194 VAPEVLKKCYGPEIDVWSAGVILYILLSGVPPFWAETESGIFRQILQGKLDFKSDPWPTI 253
Query: 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLK 388
S++AKDLI KML P +R++AHE LCHPWI + APD+ LDPAVLSRLKQFS MNK+K
Sbjct: 254 SEAAKDLIYKMLERSPKKRISAHEALCHPWIVDEQAAPDKPLDPAVLSRLKQFSQMNKIK 313
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD 448
KMALRVIAE LSEEEI GLKE+FK +DTDNSG ITF+ELKAGL+R GS L ++EI+ LMD
Sbjct: 314 KMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMD 373
Query: 449 AADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNM 508
AAD+DNSGTIDYGEF+AAT+H+NK+EREE+LVAAF YFDKDGSGYIT+DELQ AC E +
Sbjct: 374 AADIDNSGTIDYGEFLAATLHMNKMEREENLVAAFSYFDKDGSGYITIDELQSACTEFGL 433
Query: 509 TDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGR-RTMRNSLNMSMRDAPG 562
D L+D+I+E+D DNDG+ID+ EF AMM+KG+ G+GR RTM +LN ++ DA G
Sbjct: 434 CDTPLDDMIKEIDLDNDGKIDFSEFTAMMRKGD-GVGRSRTMMKNLNFNIADAFG 487
|
|
| TAIR|locus:2171726 CDPK9 "calmodulin-like domain protein kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1718 (609.8 bits), Expect = 6.5e-177, P = 6.5e-177
Identities = 326/473 (68%), Positives = 397/473 (83%)
Query: 85 QTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE 144
+T +VL +KT N+ D Y LG+ LGQGQFGTT+LCT TG + ACKSI KRKL+ +ED +
Sbjct: 6 RTRWVLPYKTKNVEDNYFLGQVLGQGQFGTTFLCTHKQTGQKLACKSIPKRKLLCQEDYD 65
Query: 145 DVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE 204
DV REIQIMHHL+ + N+V I+ AYED+ VH+VMELC GGELFDRI++RGHYSER+AA+
Sbjct: 66 DVLREIQIMHHLSEYPNVVRIESAYEDTKNVHLVMELCEGGELFDRIVKRGHYSEREAAK 125
Query: 205 LTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264
L + IVGVVEACHSLGV+HRDLKPENFL + D+D SLK+ DFGLSVF PG+ F+++VG
Sbjct: 126 LIKTIVGVVEACHSLGVVHRDLKPENFLFSSSDEDASLKSTDFGLSVFCTPGEAFSELVG 185
Query: 265 SPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP 324
S YYVAPEVL KHYGPE DVW+AGVILYILL G PPFWAE++ GIF +L+G ++FE +P
Sbjct: 186 SAYYVAPEVLHKHYGPECDVWSAGVILYILLCGFPPFWAESEIGIFRKILQGKLEFEINP 245
Query: 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAM 384
WP IS+SAKDLI+KML S P +RLTAH+VLCHPWI ++ VAPD+ LD AV+SRLK+FSAM
Sbjct: 246 WPSISESAKDLIKKMLESNPKKRLTAHQVLCHPWIVDDKVAPDKPLDCAVVSRLKKFSAM 305
Query: 385 NKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIR 444
NKLKKMALRVIAE LSEEEI GLKE+FK +DTD SG ITF+ELK +RR GS L ++EI+
Sbjct: 306 NKLKKMALRVIAERLSEEEIGGLKELFKMIDTDKSGTITFEELKDSMRRVGSELMESEIQ 365
Query: 445 DLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACA 504
+L+ AADVD SGTIDYGEF+AAT+HLNKLEREE+LVAAF +FDKD SGYIT++ELQQA
Sbjct: 366 ELLRAADVDESGTIDYGEFLAATIHLNKLEREENLVAAFSFFDKDASGYITIEELQQAWK 425
Query: 505 EHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV---GLGRRTMRNSLN 554
E + D L+++I+++DQDNDG+IDYGEFVAMM+KGN G+GRRTMRNSLN
Sbjct: 426 EFGINDSNLDEMIKDIDQDNDGQIDYGEFVAMMRKGNGTGGGIGRRTMRNSLN 478
|
|
| TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1646 (584.5 bits), Expect = 2.8e-169, P = 2.8e-169
Identities = 303/454 (66%), Positives = 375/454 (82%)
Query: 89 VLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR 148
VLG ++++ YTLG++LG+GQFG T+LCT+ ATG++FACK+I+KRKL+++ED+EDVRR
Sbjct: 56 VLGRPMEDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIEDVRR 115
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI 208
E+QIMHHL G NIV +KGAYED VH+VMELCAGGELFDRII +GHYSER AA L R
Sbjct: 116 EVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLRT 175
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYY 268
IV ++ CHS+GV+HRDLKPENFLL++KD++ LKA DFGLSVF+KPG++F D+VGS YY
Sbjct: 176 IVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFKDIVGSAYY 235
Query: 269 VAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328
+APEVL + YGPEAD+W+ GV+LYILL GVPPFWAE++ GIF+A+L G +DF SDPWP+I
Sbjct: 236 IAPEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQVDFSSDPWPVI 295
Query: 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLK 388
S AKDL+RKML S P +RLTA +VL HPWI E+G APD LD AV+SRLKQF AMN K
Sbjct: 296 SPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFK 355
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD 448
K+ALRVIA LSEEEI GLKEMFK MDTDNSG IT +EL+ GL + G+ L + E++ LM+
Sbjct: 356 KVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLME 415
Query: 449 AADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNM 508
AAD D +GTIDYGEFIAAT+H+N+L+REEHL +AFQ+FDKD SGYIT +EL+QA E M
Sbjct: 416 AADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQALREFGM 475
Query: 509 TDVL-LEDIIREVDQDNDGRIDYGEFVAMMQKGN 541
D +++II EVD DNDGRI+Y EFVAMM+KGN
Sbjct: 476 NDGRDIKEIISEVDGDNDGRINYEEFVAMMRKGN 509
|
|
| TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1642 (583.1 bits), Expect = 7.4e-169, P = 7.4e-169
Identities = 303/454 (66%), Positives = 376/454 (82%)
Query: 89 VLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR 148
VLG ++++ Y+LG++LG+GQFG T+LCT+ ATG +FACK+I+KRKL+++ED+EDVRR
Sbjct: 61 VLGRPMEDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKLVNKEDIEDVRR 120
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI 208
E+QIMHHL G NIV +KGAYED VH+VMELCAGGELFDRII +GHYSER AA L R
Sbjct: 121 EVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLRT 180
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYY 268
IV +V CHS+GV+HRDLKPENFLL+NKD++ LKA DFGLSVF+KPG++F D+VGS YY
Sbjct: 181 IVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGEVFKDIVGSAYY 240
Query: 269 VAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328
+APEVL + YGPEAD+W+ GV+LYILL GVPPFWAE++ GIF+A+L+GH+DF SDPWP I
Sbjct: 241 IAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHVDFSSDPWPSI 300
Query: 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLK 388
S AKDL++KML S P +RLTA +VL HPWI E+G APD LD AV+SRLKQF AMN K
Sbjct: 301 SPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFK 360
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD 448
K+ALRVIA LSEEEI GLKEMFK MDTD+SG IT +EL+ GL + G+ L + E++ LM+
Sbjct: 361 KVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLME 420
Query: 449 AADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNM 508
AAD D +GTIDYGEFIAAT+H+N+L+REEHL +AFQ+FDKD SGYIT++EL+QA E M
Sbjct: 421 AADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFGM 480
Query: 509 TDVL-LEDIIREVDQDNDGRIDYGEFVAMMQKGN 541
D +++II EVD DNDGRI+Y EFVAMM+KGN
Sbjct: 481 NDGRDIKEIISEVDGDNDGRINYDEFVAMMRKGN 514
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| A5A7I8 | CDPK5_SOLTU | 2, ., 7, ., 1, 1, ., 1 | 0.8351 | 0.9485 | 1.0 | N/A | no |
| A5A7I7 | CDPK4_SOLTU | 2, ., 7, ., 1, 1, ., 1 | 0.8480 | 0.9840 | 0.9964 | N/A | no |
| Q39016 | CDPKB_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7052 | 0.8386 | 0.9555 | no | no |
| P49101 | CDPK2_MAIZE | 2, ., 7, ., 1, 1, ., 1 | 0.6467 | 0.8014 | 0.8810 | N/A | no |
| Q38869 | CDPK4_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7044 | 0.8421 | 0.9481 | no | no |
| P53684 | CDPKB_ORYSJ | 2, ., 7, ., 1, 1, ., 1 | 0.7554 | 0.8882 | 0.9243 | no | no |
| P28583 | CDPK_SOYBN | 2, ., 7, ., 1, 1, ., 1 | 0.7305 | 0.8386 | 0.9311 | no | no |
| Q9SZM3 | CDPKQ_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.8747 | 0.8581 | 1.0 | no | no |
| Q38872 | CDPK6_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.8303 | 0.9645 | 1.0 | no | no |
| Q38871 | CDPK5_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.8398 | 0.9822 | 0.9964 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00036285001 | SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (561 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00027665001 | SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (769 aa) | • | 0.800 | ||||||||
| GSVIVG00022728001 | SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (873 aa) | • | 0.800 | ||||||||
| GSVIVG00006233001 | SubName- Full=Chromosome chr1 scaffold_166, whole genome shotgun sequence; (805 aa) | • | 0.800 | ||||||||
| GSVIVG00002525001 | SubName- Full=Chromosome chr2 scaffold_132, whole genome shotgun sequence; (943 aa) | • | 0.800 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 564 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-100 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 5e-93 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 2e-63 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 1e-60 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 9e-57 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 5e-56 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 7e-53 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 2e-50 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-50 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 6e-50 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-48 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 9e-48 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 2e-45 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-44 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 4e-43 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 9e-42 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 5e-41 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 3e-39 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 4e-39 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 1e-38 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 3e-38 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 4e-38 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 3e-37 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 7e-37 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 5e-36 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 3e-35 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 3e-34 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 3e-34 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 4e-34 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 6e-34 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 2e-33 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 2e-33 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 7e-33 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 9e-33 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 1e-32 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 2e-32 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 6e-32 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 7e-32 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 1e-31 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 2e-31 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 3e-31 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 3e-31 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 4e-31 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 5e-31 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 8e-31 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 1e-30 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 2e-30 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 2e-30 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 2e-30 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 3e-30 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 3e-30 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 1e-29 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 1e-29 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 3e-29 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 4e-29 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 8e-29 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 9e-29 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 9e-29 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 1e-28 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 1e-28 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 1e-28 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 1e-28 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 2e-28 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 2e-28 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 2e-28 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 3e-28 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 3e-28 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 3e-28 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 4e-28 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 9e-28 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 2e-27 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 2e-27 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 2e-27 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 3e-27 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 4e-27 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 4e-27 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 4e-27 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 4e-27 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 8e-27 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 1e-26 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 2e-26 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 2e-26 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 2e-26 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 3e-26 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 4e-26 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 4e-26 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 4e-26 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 5e-26 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 6e-26 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 1e-25 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 1e-25 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 2e-25 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 4e-25 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 7e-25 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 1e-24 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 2e-24 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 2e-24 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 2e-24 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 3e-24 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 3e-24 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 4e-24 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 4e-24 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 6e-24 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 7e-24 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 1e-23 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 1e-23 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 1e-23 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 2e-23 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 2e-23 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-23 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 2e-23 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 4e-23 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 5e-23 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 6e-23 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 8e-23 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 9e-23 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 9e-23 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 1e-22 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-22 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 2e-22 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 2e-22 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 3e-22 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 3e-22 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 3e-22 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 5e-22 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 6e-22 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 7e-22 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 1e-21 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 2e-21 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 2e-21 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 2e-21 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 2e-21 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 3e-21 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 4e-21 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 6e-21 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 7e-21 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 7e-21 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 7e-21 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 8e-21 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 1e-20 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 2e-20 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 2e-20 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 2e-20 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 2e-20 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 3e-20 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 3e-20 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 4e-20 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 5e-20 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 5e-20 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 6e-20 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 6e-20 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 9e-20 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 1e-19 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 3e-19 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 3e-19 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 4e-19 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 4e-19 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 6e-19 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 2e-18 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 2e-18 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 3e-18 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 3e-18 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 5e-18 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 5e-18 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 1e-17 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 1e-17 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 2e-17 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 3e-17 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 4e-17 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 4e-17 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 4e-17 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 6e-17 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 6e-17 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 1e-16 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 2e-16 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 2e-16 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 3e-16 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 3e-16 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 4e-16 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 4e-16 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 5e-16 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 6e-16 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 6e-16 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 8e-16 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 1e-15 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 1e-15 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 1e-15 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 2e-15 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 2e-15 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 3e-15 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 3e-15 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 3e-15 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 4e-15 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 6e-15 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 6e-15 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 1e-14 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 1e-14 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-14 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 2e-14 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 3e-14 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 7e-14 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 7e-14 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 8e-14 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 1e-13 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 2e-13 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-13 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 3e-13 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 4e-13 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 7e-13 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 1e-12 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 2e-12 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 2e-12 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-12 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-12 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 5e-12 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 1e-11 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 2e-11 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 2e-11 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 2e-11 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 3e-11 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 4e-11 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 5e-11 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 5e-11 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 6e-11 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 7e-11 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 7e-11 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 9e-11 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 9e-11 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 1e-10 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 1e-10 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 1e-10 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-10 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-10 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 6e-10 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 6e-10 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 8e-10 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 8e-10 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 1e-09 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 2e-09 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 2e-09 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 2e-09 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 3e-09 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-09 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 4e-09 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 8e-09 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-08 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 1e-08 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 2e-08 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 2e-08 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 2e-08 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-08 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 2e-08 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 2e-08 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 2e-08 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 3e-08 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 4e-08 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 4e-08 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 5e-08 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 5e-08 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 7e-08 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 8e-08 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 1e-07 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 1e-07 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 2e-07 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 3e-07 | |
| PTZ00284 | 467 | PTZ00284, PTZ00284, protein kinase; Provisional | 3e-07 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 3e-07 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 5e-07 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 6e-07 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 7e-07 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 1e-06 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 1e-06 | |
| smart00027 | 96 | smart00027, EH, Eps15 homology domain | 1e-06 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 1e-06 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 1e-06 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 2e-06 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 2e-06 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-06 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 3e-06 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 3e-06 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 4e-06 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 4e-06 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 5e-06 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 6e-06 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 6e-06 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 7e-06 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 8e-06 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 8e-06 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 8e-06 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 9e-06 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 1e-05 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 1e-05 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 2e-05 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 2e-05 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 3e-05 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 3e-05 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 4e-05 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 5e-05 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 6e-05 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 7e-05 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 9e-05 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 9e-05 | |
| PRK14879 | 211 | PRK14879, PRK14879, serine/threonine protein kinas | 3e-04 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 4e-04 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 5e-04 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 5e-04 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 6e-04 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 7e-04 | |
| cd00213 | 88 | cd00213, S-100, S-100: S-100 domain, which represe | 8e-04 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 8e-04 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 0.001 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 0.001 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 0.002 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 0.002 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 0.002 | |
| smart00750 | 176 | smart00750, KIND, kinase non-catalytic C-lobe doma | 0.002 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 0.002 | |
| pfam06293 | 206 | pfam06293, Kdo, Lipopolysaccharide kinase (Kdo/Waa | 0.003 | |
| PLN03225 | 566 | PLN03225, PLN03225, Serine/threonine-protein kinas | 0.003 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 0.004 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 0.004 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 303 bits (779), Expect = e-100
Identities = 119/261 (45%), Positives = 157/261 (60%), Gaps = 9/261 (3%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + KLG+G FG YL + TG A K I K+K+ ++D E + REI+I+ L H
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKI--KKDRERILREIKILKKL-KHP 57
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV + +ED +++VME C GG+LFD + +RG SE +A R I+ +E HS G
Sbjct: 58 NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKG 117
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYG 279
++HRDLKPEN LL D+D +K DFGL+ PG+ T VG+P Y+APEVLL K YG
Sbjct: 118 IVHRDLKPENILL---DEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYG 174
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQG-IFDAVLKGHIDFESDPWPLISDSAKDLIRK 338
D+W+ GVILY LL+G PPF + Q +F + K F W IS AKDLIRK
Sbjct: 175 KAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD-ISPEAKDLIRK 233
Query: 339 MLCSQPSERLTAHEVLCHPWI 359
+L P +RLTA E L HP+
Sbjct: 234 LLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 285 bits (731), Expect = 5e-93
Identities = 117/265 (44%), Positives = 154/265 (58%), Gaps = 11/265 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y L RKLG G FGT Y TG A K + KR S++D RREI+I+ L H
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTA-RREIRILRRL-SHP 58
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV + A+ED +++VME C GG+LFD + + G SE +A ++ I+ +E HS G
Sbjct: 59 NIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNG 118
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDVVGSPYYVAPEVLLKH-- 277
++HRDLKPEN LL +K DFGL+ K T VG+P+Y+APEVLL
Sbjct: 119 IIHRDLKPENILLDENGV---VKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNG 175
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAE---TQQGIFDAVLKGHIDFESDPWPLISDSAKD 334
YGP+ DVW+ GVILY LL+G PPF E Q + +L ++F+ W S+ AKD
Sbjct: 176 YGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKD 235
Query: 335 LIRKMLCSQPSERLTAHEVLCHPWI 359
LI+K L PS+R TA E+L HPW
Sbjct: 236 LIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 207 bits (530), Expect = 2e-63
Identities = 99/261 (37%), Positives = 146/261 (55%), Gaps = 21/261 (8%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L + TG +A K + K+K+I R++VE E I+ + H IV +
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLH 59
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSE----RKAAELTRIIVGVVEACHSLGVM 222
A++ +++V+E GGELF + + G +SE AAE IV +E HSLG++
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAE----IVLALEYLHSLGII 115
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-VVGSPYYVAPEVLL-KHYGP 280
+RDLKPEN LL D D +K DFGL+ T+ G+P Y+APEVLL K YG
Sbjct: 116 YRDLKPENILL---DADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGK 172
Query: 281 EADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKML 340
D W+ GV+LY +L+G PPF+AE ++ I++ +LK + F +S A+DLI +L
Sbjct: 173 AVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEF----LSPEARDLISGLL 228
Query: 341 CSQPSERLTAHEVLC---HPW 358
P++RL + HP+
Sbjct: 229 QKDPTKRLGSGGAEEIKAHPF 249
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 1e-60
Identities = 93/288 (32%), Positives = 136/288 (47%), Gaps = 41/288 (14%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ G+ +G+G F T L E T E+A K + KR+LI + V+ V+ E +++ L GH
Sbjct: 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERK----AAELTRIIVGVVEAC 216
I+ + ++D ++ V+E GEL I + G E+ AAE+ + E
Sbjct: 63 GIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLAL----EYL 118
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI------------------ 258
HS G++HRDLKPEN LL D D +K DFG + P
Sbjct: 119 HSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKN 175
Query: 259 ---FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL 314
F VG+ YV+PE+L K G +D+W G I+Y +L+G PPF + F +L
Sbjct: 176 RRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL 235
Query: 315 KGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAH----EVLCHPW 358
K F P AKDLI K+L P +RL + E+ HP+
Sbjct: 236 KLEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 9e-57
Identities = 94/255 (36%), Positives = 129/255 (50%), Gaps = 44/255 (17%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FGT YL + TG + A K I K S +E++ REI+I+ L H NIV +
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKED--SSSLLEELLREIEILKKLN-HPNIVKLY 57
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRD 225
G +ED +++VME C GG L D + + G SE + + I+ +E HS G++HRD
Sbjct: 58 GVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD 117
Query: 226 LKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEVLL--KHYGPEA 282
LKPEN LL D+ +K DFGLS + +VG+P Y+APEVLL +Y ++
Sbjct: 118 LKPENILL--DSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKS 175
Query: 283 DVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342
D+W+ GVILY L KDLIRKML
Sbjct: 176 DIWSLGVILYEL-----------------------------------PELKDLIRKMLQK 200
Query: 343 QPSERLTAHEVLCHP 357
P +R +A E+L H
Sbjct: 201 DPEKRPSAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 188 bits (481), Expect = 5e-56
Identities = 93/270 (34%), Positives = 135/270 (50%), Gaps = 27/270 (10%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+ +G +G +L + +TG +A K I K +I + V+ V E I+ ++ +K
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA---QSPYVVK 57
Query: 167 GAY----EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVM 222
Y + +L +VME GG+L + G E A IV +E HS G++
Sbjct: 58 LYYSFQGKKNLY--LVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGII 115
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVF-FKPGQIF--------TDVVGSPYYVAPEV 273
HRDLKP+N L+ D + LK DFGLS QI +VG+P Y+APEV
Sbjct: 116 HRDLKPDNILI---DSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEV 172
Query: 274 LL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332
+L + + D W+ G ILY L G+PPF ET + IF +L G I++ D +SD A
Sbjct: 173 ILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEA 230
Query: 333 KDLIRKMLCSQPSERLTAH---EVLCHPWI 359
DLI K+L P +RL A E+ HP+
Sbjct: 231 IDLISKLLVPDPEKRLGAKSIEEIKNHPFF 260
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 7e-53
Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 14/266 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+T G LG+G FG+ YL + TG A KS+ + S E++E + REI+I+ L H
Sbjct: 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSV-ELSGDSEEELEALEREIRILSSLQ-HP 59
Query: 161 NIVTIKGAY--EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
NIV G+ E+ ++I +E +GG L + + G E + TR I+ + HS
Sbjct: 60 NIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS 119
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK---PGQIFTDVVGSPYYVAPEVLL 275
G++HRD+K N L+ D D +K DFG + G+ V G+PY++APEV+
Sbjct: 120 NGIVHRDIKGANILV---DSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIR 176
Query: 276 -KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP-LISDSAK 333
+ YG AD+W+ G + + +G PP+ A+ K E P +S+ AK
Sbjct: 177 GEEYGRAADIWSLGCTVIEMATGKPPWSELGNP--MAALYKIGSSGEPPEIPEHLSEEAK 234
Query: 334 DLIRKMLCSQPSERLTAHEVLCHPWI 359
D +RK L P +R TA E+L HP++
Sbjct: 235 DFLRKCLRRDPKKRPTADELLQHPFL 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 175 bits (446), Expect = 2e-50
Identities = 94/270 (34%), Positives = 148/270 (54%), Gaps = 28/270 (10%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + LG G FG L +G +A K +SK K++ + VE V E +I+ + H
Sbjct: 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHP 61
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERK----AAELTRIIVGVVEAC 216
+V + G+++D +++VME GGELF + + G + E AA+ +V +E
Sbjct: 62 FLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQ----VVLALEYL 117
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK--PGQIFTDVVGSPYYVAPEVL 274
HSL +++RDLKPEN LL D D +K DFG F K G+ +T + G+P Y+APE++
Sbjct: 118 HSLDIVYRDLKPENLLL---DSDGYIKITDFG---FAKRVKGRTYT-LCGTPEYLAPEII 170
Query: 275 L-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333
L K YG D W G+++Y +L+G PPF+ + I++ +L+G + F S S AK
Sbjct: 171 LSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS----FFSPDAK 226
Query: 334 DLIRKMLCSQPSERL-----TAHEVLCHPW 358
DLIR +L ++RL +++ HPW
Sbjct: 227 DLIRNLLQVDLTKRLGNLKNGVNDIKNHPW 256
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 173 bits (440), Expect = 5e-50
Identities = 77/266 (28%), Positives = 133/266 (50%), Gaps = 16/266 (6%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + +++G+G FG YL + G + K I + S ++ ED E++I+ L H
Sbjct: 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HP 59
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR----GHYSERKAAELTRIIVGVVEAC 216
NI+ ++E+ + IVME GG+L +I ++ + E + + + ++
Sbjct: 60 NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL 119
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVLL 275
HS ++HRD+KP+N L + +K DFG+S V + VVG+PYY++PE+
Sbjct: 120 HSRKILHRDIKPQNIFL---TSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQ 176
Query: 276 -KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI-SDSAK 333
K Y ++D+W+ G +LY L + PF E + +LKG P P S +
Sbjct: 177 NKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY----PPIPSQYSSELR 232
Query: 334 DLIRKMLCSQPSERLTAHEVLCHPWI 359
+L+ +L P ER + ++L P+I
Sbjct: 233 NLVSSLLQKDPEERPSIAQILQSPFI 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 172 bits (439), Expect = 6e-50
Identities = 91/262 (34%), Positives = 135/262 (51%), Gaps = 18/262 (6%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG G FG L + FA K + KR ++ E + E +I+ H IV +
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLY 59
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
++D ++++ME C GGEL+ + RG + E A +V E H+ G+++RDL
Sbjct: 60 RTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDL 119
Query: 227 KPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVW 285
KPEN LL D + +K +DFG + K GQ G+P YVAPE++L K Y D W
Sbjct: 120 KPENLLL---DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYW 176
Query: 286 TAGVILYILLSGVPPFWA--ETQQGIFDAVLKG--HIDFESDPWPLISDSAKDLIRKMLC 341
+ G++LY LL+G PPF E I++ +LKG ++F P I +AKDLI+++L
Sbjct: 177 SLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEF---P-NYIDKAAKDLIKQLLR 232
Query: 342 SQPSERL-----TAHEVLCHPW 358
P ERL ++ H W
Sbjct: 233 RNPEERLGNLKGGIKDIKKHKW 254
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 172 bits (436), Expect = 2e-48
Identities = 96/283 (33%), Positives = 139/283 (49%), Gaps = 30/283 (10%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + RKLG+G FG YL + A K ++K+ ++VE REIQI+ L
Sbjct: 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH---YSERKAAELTRIIVGVVEACH 217
NIV + ++D +++VME GG L D + + G SE +A + I+ +E H
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI-------FTDVVGSPYYVA 270
S G++HRD+KPEN LL D +K IDFGL+ + VG+P Y+A
Sbjct: 119 SKGIIHRDIKPENILL--DRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA 176
Query: 271 PEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW- 325
PEVLL + +D+W+ G+ LY LL+G+PPF E LK I P
Sbjct: 177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLK-IILELPTPSL 235
Query: 326 ---------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
LIS +A DL++K+L P RL++ L H +
Sbjct: 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLL 278
|
Length = 384 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 9e-48
Identities = 91/264 (34%), Positives = 130/264 (49%), Gaps = 16/264 (6%)
Query: 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH 159
L+ + K+G+G FG Y TG E A K I KL S+E E + EIQI+ H
Sbjct: 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVI---KLESKEKKEKIINEIQILKKCK-H 56
Query: 160 KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEACHS 218
NIV G+Y + IVME C+GG L D + +E + A + + ++ +E HS
Sbjct: 57 PNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS 116
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KH 277
G++HRD+K N LL D +K IDFGLS + +VG+PY++APEV+ K
Sbjct: 117 NGIIHRDIKAANILL---TSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKP 173
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK--GHIDFESDPWP-LISDSAKD 334
Y +AD+W+ G+ L G PP+ L P SD KD
Sbjct: 174 YDYKADIWSLGITAIELAEGKPPYSELP----PMKALFKIATNGPPGLRNPEKWSDEFKD 229
Query: 335 LIRKMLCSQPSERLTAHEVLCHPW 358
++K L P +R TA ++L HP+
Sbjct: 230 FLKKCLQKNPEKRPTAEQLLKHPF 253
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 2e-45
Identities = 83/290 (28%), Positives = 126/290 (43%), Gaps = 39/290 (13%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED-VRREIQIMHHLAGH 159
Y + ++G+G G + + TG A K ++ R+L + + REI+ + H
Sbjct: 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL--EGGIPNQALREIKALQAC-QH 58
Query: 160 KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEACHS 218
+V + + +VME L + + E + R+++ V H+
Sbjct: 59 PYVVKLLDVFPHGSGFVLVMEYMPSD-LSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA 117
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG--QIFTDVVGSPYYVAPEVLL- 275
G+MHRDLKP N L+ D LK DFGL+ F ++++ V + +Y APE+L
Sbjct: 118 NGIMHRDLKPANLLI---SADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYG 174
Query: 276 -KHYGPEADVWTAGVILYILLSGVPPFWAET---QQGIFDAVLK---------------- 315
+ Y P D+W G I LL+G P F E Q I L
Sbjct: 175 ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234
Query: 316 GHIDF-ESDPWPL------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
I F ES P PL S A DL++ +L PS+RL+A E L HP+
Sbjct: 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 158 bits (400), Expect = 2e-44
Identities = 85/258 (32%), Positives = 133/258 (51%), Gaps = 10/258 (3%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
+ + +G FG+ YL + +TG FA K + K +I++ V +V+ E IM +
Sbjct: 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAK 61
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+ +++ +++VME GG+ I G E A + +V VE H G++HR
Sbjct: 62 LYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEA-D 283
D+KPEN L+ D LK DFGLS + G VG+P Y+APE +L + D
Sbjct: 122 DIKPENLLI---DQTGHLKLTDFGLS---RNGLENKKFVGTPDYLAPETILGVGDDKMSD 175
Query: 284 VWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQ 343
W+ G +++ L G PPF AET +FD +L I++ + S A DLI ++LC
Sbjct: 176 WWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD 235
Query: 344 PSERLTAH---EVLCHPW 358
P++RL A+ E+ HP+
Sbjct: 236 PAKRLGANGYQEIKSHPF 253
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 4e-43
Identities = 89/284 (31%), Positives = 139/284 (48%), Gaps = 37/284 (13%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG +L + TG +A K + K +I R + VR E I+ A IV +
Sbjct: 9 IGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILAD-ADSPWIVKLY 67
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
+++D +++VME GG+L + +I++ + E A +V +++ H LG +HRD+
Sbjct: 68 YSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDI 127
Query: 227 KPENFLLVNKDDDFSLKAIDFGLS-------------------VFFKPGQIFTD------ 261
KP+N L+ D D +K DFGL +F +
Sbjct: 128 KPDNILI---DADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRR 184
Query: 262 -----VVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK 315
VG+P Y+APEVL YG E D W+ GVILY +L G PPF+++T Q ++ ++
Sbjct: 185 VRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIIN 244
Query: 316 GHIDFESDPWPLISDSAKDLIRKMLCSQPSERLT-AHEVLCHPW 358
P P +S A DLI ++LC P +RL E+ HP+
Sbjct: 245 WKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 9e-42
Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 47/294 (15%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED---VEDVRREIQIMHHLA 157
Y KLG+G +G Y + TG A K I +L + E+ +R EI ++ L
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKI---RLDNEEEGIPSTALR-EISLLKELK 56
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFD--RII--QRGHYSERKAAELTRIIVGVV 213
H NIV + +++V E C D + + + G S + ++ +
Sbjct: 57 -HPNIVKLLDVIHTERKLYLVFEYCD----MDLKKYLDKRPGPLSPNLIKSIMYQLLRGL 111
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPE 272
CHS ++HRDLKP+N +L+N+D LK DFGL+ F P + +T V + +Y APE
Sbjct: 112 AYCHSHRILHRDLKPQN-ILINRDG--VLKLADFGLARAFGIPLRTYTHEVVTLWYRAPE 168
Query: 273 VLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQG----IFD-------------AV 313
+LL KHY D+W+ G I +++G P F +++ IF
Sbjct: 169 ILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK 228
Query: 314 LKGHID----FESDPW----PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
L + F P + DL+ KML P++R++A E L HP+
Sbjct: 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 5e-41
Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y LG +G+G FG Y + TG A K IS K I E ++ + +EI ++ +L H
Sbjct: 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEK-IKEEALKSIMQEIDLLKNLK-HP 59
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV G+ E S ++I++E G L I + G + E A ++ + H G
Sbjct: 60 NIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG 119
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDVVGSPYYVAPEVL-LKHY 278
V+HRD+K N +L KD +K DFG++ + VVG+PY++APEV+ +
Sbjct: 120 VIHRDIKAAN-ILTTKDG--VVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGA 176
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
+D+W+ G + LL+G PP++ +F V H IS KD +
Sbjct: 177 STASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEG----ISPELKDFLM 232
Query: 338 KMLCSQPSERLTAHEVLCHPWI 359
+ P+ R TA ++L HPWI
Sbjct: 233 QCFQKDPNLRPTAKQLLKHPWI 254
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 3e-39
Identities = 81/293 (27%), Positives = 122/293 (41%), Gaps = 44/293 (15%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR--REIQIMHHLAG 158
Y K+G+G +G Y + TG A K I R + REI+++ L
Sbjct: 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRF---ESEGIPKTALREIKLLKELN- 56
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGG--ELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
H NI+ + + +++V E +L ++ E ++ + C
Sbjct: 57 HPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKD--RQRGLPESLIKSYLYQLLQGLAFC 114
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVLL 275
HS G++HRDLKPEN LL+N + LK DFGL+ F P + +T V + +Y APE+LL
Sbjct: 115 HSHGILHRDLKPEN-LLINTEGV--LKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLL 171
Query: 276 --KHYGPEADVWTAGVILYILLSGVPPF-----------------------WAETQQGIF 310
K Y D+W+ G I LLS P F W +
Sbjct: 172 GDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLAR 231
Query: 311 DAVLKGHIDFESDPWPLI----SDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ P P + S A DL+ +ML P +R+TA + L HP+
Sbjct: 232 NYKFS-FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 4e-39
Identities = 87/269 (32%), Positives = 135/269 (50%), Gaps = 20/269 (7%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+LY K+G+G G Y T+ ATG E A K + + +++ E + EI IM
Sbjct: 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMR----LRKQNKELIINEILIMKDCK 73
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA-- 215
H NIV +Y + +VME GG L D I Q ++ ++ + V++
Sbjct: 74 -HPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQ--NFVRMNEPQIAYVCREVLQGLE 130
Query: 216 -CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF-TDVVGSPYYVAPEV 273
HS V+HRD+K +N LL +KD S+K DFG + + VVG+PY++APEV
Sbjct: 131 YLHSQNVIHRDIKSDNILL-SKDG--SVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEV 187
Query: 274 LLKH-YGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDF-ESDPWPLISD 330
+ + YGP+ D+W+ G++ + G PP+ E + +F KG + W S
Sbjct: 188 IKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKW---SP 244
Query: 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
KD + K L P +R +A E+L HP++
Sbjct: 245 EFKDFLNKCLVKDPEKRPSAEELLQHPFL 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 1e-38
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 49/295 (16%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED-----VRREIQIMHH 155
Y G+KLG+G + Y + TG A K I KL R++ +D REI+++
Sbjct: 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKI---KLGERKEAKDGINFTALREIKLLQE 58
Query: 156 LAGHKNIVTIKGAYEDSLCVHIVMELCAG---GELFDRII--QRGHYSERKAAELTRIIV 210
L H NI+ + + +++V E + D+ I K+ + +
Sbjct: 59 LK-HPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADI---KS--YMLMTL 112
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDVVGSPYYV 269
+E HS ++HRDLKP N L+ D LK DFGL+ F P + T V + +Y
Sbjct: 113 RGLEYLHSNWILHRDLKPNNLLI---ASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYR 169
Query: 270 APEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAET---QQG-IFDAV---------- 313
APE+L +HYG D+W+ G I LL VP ++ Q G IF+A+
Sbjct: 170 APELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG 229
Query: 314 ---LKGHIDFESDP-------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
L +++F+ P +P SD A DL++++L P++R+TA + L HP+
Sbjct: 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 3e-38
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 20/268 (7%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ L R +G+G FG + + T FA K ++K+K + + V +V E +I+ L H
Sbjct: 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HP 60
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI----IVGVVEAC 216
+V + +++D +++V++L GG+L + Q+ +SE E + IV +E
Sbjct: 61 FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSE----EQVKFWICEIVLALEYL 116
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL- 275
HS G++HRD+KP+N LL D+ + DF ++ P + T G+P Y+APEVL
Sbjct: 117 HSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCR 173
Query: 276 KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP--WPLISDSAK 333
+ Y D W+ GV Y L G P+ ++ +D S A
Sbjct: 174 QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR---AKQETADVLYPATWSTEAI 230
Query: 334 DLIRKMLCSQPSERL--TAHEVLCHPWI 359
D I K+L P +RL ++ HP+
Sbjct: 231 DAINKLLERDPQKRLGDNLKDLKNHPYF 258
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 4e-38
Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 22/282 (7%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G G FG +L + + +A K ++ ++I + + V E +++ ++ H I+ +
Sbjct: 9 VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLF 67
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
D ++++ME GGELF + G +S IV +E HS +++RDL
Sbjct: 68 WTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDL 127
Query: 227 KPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT-DVVGSPYYVAPEVLL-KHYGPEADV 284
KPEN LL D + +K DFG F K + T + G+P Y+APEV+ K + D
Sbjct: 128 KPENILL---DKEGHIKLTDFG---FAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDW 181
Query: 285 WTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQP 344
W G+++Y +L G PPF+ + GI++ +L G ++F + AKDLI+K+L
Sbjct: 182 WALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRH----LDLYAKDLIKKLLVVDR 237
Query: 345 SERL-----TAHEVLCHPW---ICENGVAPDRSLDPAVLSRL 378
+ RL A +V H W + + V P R L P ++ ++
Sbjct: 238 TRRLGNMKNGADDVKNHRWFKSVDWDDV-PQRKLKPPIVPKV 278
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 3e-37
Identities = 85/249 (34%), Positives = 136/249 (54%), Gaps = 15/249 (6%)
Query: 103 LGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNI 162
+G LG G FG + TG +A K + KR+++ + V+ V +E I+ L+ H I
Sbjct: 22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFI 80
Query: 163 VTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVM 222
V + +++D V+ ++E GGELF + + G + A +V E HS ++
Sbjct: 81 VNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDII 140
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK--PGQIFTDVVGSPYYVAPEVLL-KHYG 279
+RDLKPEN LL D+ +K DFG F K P + FT + G+P Y+APEV+ K +G
Sbjct: 141 YRDLKPENLLL---DNKGHVKVTDFG---FAKKVPDRTFT-LCGTPEYLAPEVIQSKGHG 193
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339
D WT GV+LY ++G PPF+ +T I++ +L G + F + W A+DL++ +
Sbjct: 194 KAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN--W--FDGRARDLVKGL 249
Query: 340 LCSQPSERL 348
L + ++RL
Sbjct: 250 LQTDHTKRL 258
|
Length = 329 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 7e-37
Identities = 77/266 (28%), Positives = 116/266 (43%), Gaps = 26/266 (9%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSI------SKRKLISREDVEDVRREIQIMHHLAGH 159
LGQG G Y TG +A K I RK + RE++ +
Sbjct: 8 VLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQL--------LRELKTLRS-CES 58
Query: 160 KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS- 218
+V GA+ + IV+E GG L D + + G E A + R I+ ++ H+
Sbjct: 59 PYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTK 118
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-VGSPYYVAPEVLL-K 276
++HRD+KP N LL+N + +K DFG+S + + VG+ Y++PE + +
Sbjct: 119 RHIIHRDIKPSN-LLINSKGE--VKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGE 175
Query: 277 HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI-DFESDPWP--LISDSAK 333
Y AD+W+ G+ L G PF Q F+ L I D P S +
Sbjct: 176 SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFE--LMQAICDGPPPSLPAEEFSPEFR 233
Query: 334 DLIRKMLCSQPSERLTAHEVLCHPWI 359
D I L P +R +A E+L HP+I
Sbjct: 234 DFISACLQKDPKKRPSAAELLQHPFI 259
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 5e-36
Identities = 91/292 (31%), Positives = 137/292 (46%), Gaps = 45/292 (15%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
+ LG+G G +L TG FA K + K+++I R V+ V E +I+ L H + T
Sbjct: 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPT 65
Query: 165 IKGAYEDSLCVHIVMELCAGGELFD-RIIQRGHYSERK-----AAELTRIIVGVVEACHS 218
+ +++ + +VM+ C GGELF Q G + AAE ++ +E H
Sbjct: 66 LYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAE----VLLALEYLHL 121
Query: 219 LGVMHRDLKPENFLL------VNKDDDFSLKAIDFGLSVFF---------KPGQIFTDV- 262
LG+++RDLKPEN LL + D D S ++ V I ++
Sbjct: 122 LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETF 181
Query: 263 -----------VGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIF 310
VG+ Y+APEV+ +G D WT G++LY +L G PF + F
Sbjct: 182 SEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETF 241
Query: 311 DAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL----TAHEVLCHPW 358
+LK + F P +S SA+DLIRK+L PS+RL A E+ HP+
Sbjct: 242 SNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPF 291
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 3e-35
Identities = 88/278 (31%), Positives = 126/278 (45%), Gaps = 11/278 (3%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTI 165
++GQG +G +L + TG A K + K L +V V E I+ + +V +
Sbjct: 8 QVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-TKSEWLVKL 66
Query: 166 KGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRD 225
A++D +++ ME GG+ + G SE A + V+A H LG +HRD
Sbjct: 67 LYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRD 126
Query: 226 LKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADV 284
LKPENFL+ D +K DFGLS VVGSP Y+APEVL K Y D
Sbjct: 127 LKPENFLI---DASGHIKLTDFGLSKGIV--TYANSVVGSPDYMAPEVLRGKGYDFTVDY 181
Query: 285 WTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE----SDPWPLISDSAKDLIRKML 340
W+ G +LY L G PPF T ++ + + DP +SD A DLI K++
Sbjct: 182 WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLI 241
Query: 341 CSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRL 378
+ ++ HP+ E R L P + L
Sbjct: 242 NDPSRRFGSLEDIKNHPFFKEVDWNELRELKPPFVPEL 279
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 3e-34
Identities = 88/292 (30%), Positives = 133/292 (45%), Gaps = 44/292 (15%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + ++LG G FG+ YL TG A K + K+K S E+ ++R E++ + L H
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKM-KKKFYSWEECMNLR-EVKSLRKLNEHP 58
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHS 218
NIV +K + ++ ++ V E G L+ + R +SE + I+ + H
Sbjct: 59 NIVKLKEVFRENDELYFVFE-YMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK 117
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH- 277
G HRDLKPEN L+ + +K DFGL+ + +TD V + +Y APE+LL+
Sbjct: 118 HGFFHRDLKPENLLVSGPE---VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRST 174
Query: 278 -YGPEADVWTAGVILYILLSGVPPF--WAETQQGIFD--AVLKGHIDFESDPWP------ 326
Y D+W G I+ L + P F +E Q ++ +VL G WP
Sbjct: 175 SYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ-LYKICSVL-GT--PTKQDWPEGYKLA 230
Query: 327 -----------------LI---SDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
LI S A DLI+ ML P +R TA + L HP+
Sbjct: 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 3e-34
Identities = 90/265 (33%), Positives = 135/265 (50%), Gaps = 22/265 (8%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG L ++ +A K +SK ++I R D E IM H A + IV +
Sbjct: 51 IGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAH-ANSEWIVQLH 109
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHY--SERKAAELTRIIVGVVEACHSLGVMHR 224
A++D +++VME GG+L + + +Y E+ A T +V ++A HS+G +HR
Sbjct: 110 YAFQDDKYLYMVMEYMPGGDLVNLM---SNYDIPEKWARFYTAEVVLALDAIHSMGFIHR 166
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTD-VVGSPYYVAPEVLLK-----H 277
D+KP+N LL D LK DFG + G + D VG+P Y++PEVL +
Sbjct: 167 DVKPDNMLL---DKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGY 223
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL--KGHIDFESDPWPLISDSAKDL 335
YG E D W+ GV LY +L G PF+A++ G + ++ K + F D IS AKDL
Sbjct: 224 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDD--IEISKQAKDL 281
Query: 336 IRKMLCSQPSE--RLTAHEVLCHPW 358
I L + R E+ HP+
Sbjct: 282 ICAFLTDREVRLGRNGVDEIKSHPF 306
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 4e-34
Identities = 80/274 (29%), Positives = 134/274 (48%), Gaps = 23/274 (8%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISR-EDVEDVRREIQIMHHL 156
+ L R LG G +G +L ++ G +A K + K ++ + + E R E Q++ +
Sbjct: 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAV 61
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
+VT+ A++ +H++++ GGELF + QR H++E + IV ++
Sbjct: 62 RRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHL 121
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT--DVVGSPYYVAPEVL 274
H LG+++RD+K EN LL D + + DFGLS F + G+ Y+APEV+
Sbjct: 122 HQLGIIYRDIKLENILL---DSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVI 178
Query: 275 LKH---YGPEADVWTAGVILYILLSGVPPFWAE----TQQGIFDAVLKGHIDFESDPWPL 327
+ D W+ GV+ + LL+G PF + +Q I +LK F
Sbjct: 179 RGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKT---- 234
Query: 328 ISDSAKDLIRKMLCSQPSERL---TAHEVLCHPW 358
+S A+D I+K+L P +RL A E+ HP+
Sbjct: 235 MSAEARDFIQKLLEKDPKKRLGANGADEIKNHPF 268
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 6e-34
Identities = 85/274 (31%), Positives = 129/274 (47%), Gaps = 35/274 (12%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTI 165
+G+G FGT + G K I + +E + V E+ I+ L H NIV
Sbjct: 7 TIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVS-EVNILRELK-HPNIVR- 63
Query: 166 KGAYED------SLCVHIVMELCAGGELFDRIIQRGHYSERKAAE---LTRIIVGVVEA- 215
Y D + ++IVME C GG+L ++IQ+ ERK E + RI+ ++ A
Sbjct: 64 ---YYDRIIDRSNQTLYIVMEYCEGGDL-AQLIQKC-KKERKYIEEEFIWRILTQLLLAL 118
Query: 216 --CHSLG-----VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-VGSPY 267
CH+ V+HRDLKP N L D + ++K DFGL+ F VG+PY
Sbjct: 119 YECHNRSDPGNTVLHRDLKPANIFL---DANNNVKLGDFGLAKILGHDSSFAKTYVGTPY 175
Query: 268 YVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326
Y++PE L Y ++D+W+ G ++Y L + PPF A Q + + +G P
Sbjct: 176 YMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF----RRIP 231
Query: 327 LI-SDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
S ++I+ ML P +R + E+L P I
Sbjct: 232 YRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 2e-33
Identities = 84/275 (30%), Positives = 128/275 (46%), Gaps = 32/275 (11%)
Query: 103 LGRKLGQGQFGTTYLCTEIATGIEFACKSI----SKRKLISREDVEDVRREIQIMHHLAG 158
G K+G G FG Y + TG A K I + K I +++ E++++ L
Sbjct: 4 RGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTI-----KEIADEMKVLELLK- 57
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
H N+V G V+I ME C+GG L + + E T ++ + HS
Sbjct: 58 HPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHS 117
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-----GQIFTDVVGSPYYVAPEV 273
G++HRD+KP N L D + +K DFG +V K G+ + G+P Y+APEV
Sbjct: 118 HGIVHRDIKPANIFL---DHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEV 174
Query: 274 L----LKHYGPEADVWTAGVILYILLSGVPPFWAETQQ--GIFDAVLKGHIDFESDPWP- 326
+ K +G AD+W+ G ++ + +G P W+E I V GH P P
Sbjct: 175 ITGGKGKGHGRAADIWSLGCVVLEMATGKRP-WSELDNEFQIMFHVGAGH----KPPIPD 229
Query: 327 --LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+S KD + + L S P +R TA E+L HP++
Sbjct: 230 SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 2e-33
Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 62/302 (20%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG L + TG +A K + K +++ +E V VR E I+ A + +V +
Sbjct: 9 IGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAE-ADNPWVVKLY 67
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG----VVEACHSLGVM 222
+++D ++++ME GG++ ++++ ++E E TR + +++ H LG +
Sbjct: 68 YSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTE----EETRFYIAETILAIDSIHKLGYI 123
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK--------------PGQIFTD------- 261
HRD+KP+N LL D +K DFGL K F D
Sbjct: 124 HRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMS 180
Query: 262 ------------------VVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFW 302
VG+P Y+APEV L+ Y E D W+ GVI+Y +L G PPF
Sbjct: 181 SKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240
Query: 303 AETQQGIFDAVL--KGHIDFESD-PWPLISDSAKDLIRKMLCSQPSERL---TAHEVLCH 356
++ Q + ++ K + F + P +S AKDLI+++ C RL +E+ H
Sbjct: 241 SDNPQETYRKIINWKETLQFPDEVP---LSPEAKDLIKRLCCE-AERRLGNNGVNEIKSH 296
Query: 357 PW 358
P+
Sbjct: 297 PF 298
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 7e-33
Identities = 84/268 (31%), Positives = 132/268 (49%), Gaps = 21/268 (7%)
Query: 103 LGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS--REDVEDVRREIQIMHHLAGHK 160
G+ LGQG FG YLC ++ TG E A K + +++V + EIQ++ +L H+
Sbjct: 6 RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HE 64
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
IV G D + I ME GG + D++ G +E + TR I+ VE HS
Sbjct: 65 RIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNM 124
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFG----LSVFFKPGQIFTDVVGSPYYVAPEVLLK 276
++HRD+K N L +D ++K DFG L G V G+PY+++PEV+
Sbjct: 125 IVHRDIKGANIL---RDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISG 181
Query: 277 H-YGPEADVWTAGVILYILLSGVPPFWA--ETQQGIFDAVLKGHIDFESDPW--PLISDS 331
YG +ADVW+ G + +L+ PP WA E IF + ++P +S
Sbjct: 182 EGYGRKADVWSVGCTVVEMLTEKPP-WAEFEAMAAIFKIATQ-----PTNPQLPSHVSPD 235
Query: 332 AKDLIRKMLCSQPSERLTAHEVLCHPWI 359
A++ +R+ +R +A E+L H ++
Sbjct: 236 ARNFLRRTFVENAKKRPSAEELLRHFFV 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 9e-33
Identities = 85/261 (32%), Positives = 131/261 (50%), Gaps = 19/261 (7%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L E ATG +A K + K +I++++V E +++ + H + +K
Sbjct: 3 LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPFLTALK 61
Query: 167 GAYE--DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+++ D LC VME GGELF + + +SE +A IV + HS V++R
Sbjct: 62 YSFQTHDRLC--FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYR 119
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEA 282
DLK EN +L D D +K DFGL G G+P Y+APEVL + YG
Sbjct: 120 DLKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 176
Query: 283 DVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342
D W GV++Y ++ G PF+ + + +F+ +L I F +S AK L+ +L
Sbjct: 177 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 232
Query: 343 QPSERL-----TAHEVLCHPW 358
P +RL A E++ H +
Sbjct: 233 DPKQRLGGGPEDAKEIMEHRF 253
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 1e-32
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
D Y L +G G Y + + A K I K + V+++R+E+Q M
Sbjct: 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEK--CQTSVDELRKEVQAMSQCN- 57
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFD---RIIQRGHYSERKAAELTRIIVGVVEA 215
H N+V ++ + +VM +GG L D RG E A + + ++ +E
Sbjct: 58 HPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEY 117
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF-FKPGQIF----TDVVGSPYYVA 270
HS G +HRD+K N LL +D S+K DFG+S G VG+P ++A
Sbjct: 118 LHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMA 174
Query: 271 PEVLLKH--YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH---IDFESDPW 325
PEV+ + Y +AD+W+ G+ L +G P+ + L+ ++ +D
Sbjct: 175 PEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYK 234
Query: 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
S S + +I L PS+R TA E+L H +
Sbjct: 235 KY-SKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 2e-32
Identities = 87/261 (33%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 104 GRKLGQGQFGTTYLCTEIATGIEFACK--SISKRKLISREDVEDVRREIQIMHHLAGHKN 161
G LG G FG+ Y + G FA K S++ +E V+ + +EI ++ L H N
Sbjct: 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPN 63
Query: 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGV 221
IV G + ++I +EL GG L + + G + E TR I+ +E H
Sbjct: 64 IVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNT 123
Query: 222 MHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYG 279
+HRD+K N L+ D + +K DFG++ GSPY++APEV+ + YG
Sbjct: 124 VHRDIKGANILV---DTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYG 180
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP-LISDSAKDLIRK 338
AD+W+ G + + +G PP W++ + AV K E P P +SD AKD I K
Sbjct: 181 LAADIWSLGCTVLEMATGKPP-WSQLEG--VAAVFKIGRSKELPPIPDHLSDEAKDFILK 237
Query: 339 MLCSQPSERLTAHEVLCHPWI 359
L PS R TA E+L HP++
Sbjct: 238 CLQRDPSLRPTAAELLEHPFV 258
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 6e-32
Identities = 80/264 (30%), Positives = 132/264 (50%), Gaps = 18/264 (6%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + +KLG+G +G+ Y ++ +A K + + S+++ ED EI+I+ + H
Sbjct: 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVN-HP 59
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELT--RIIVGVVE---A 215
NI++ K A+ D + IVME G+L + I + + E RI + ++ A
Sbjct: 60 NIISYKEAFLDGNKLCIVMEYAPFGDLS-KAISKRKKKRKLIPEQEIWRIFIQLLRGLQA 118
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL 275
H ++HRDLK N LLV D +K D G+S K T +G+P+Y+APEV
Sbjct: 119 LHEQKILHRDLKSANILLVANDL---VKIGDLGISKVLKKNMAKT-QIGTPHYMAPEVWK 174
Query: 276 KH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI-SDSAK 333
Y ++D+W+ G +LY + + PPF A + Q + V +G + P P I S +
Sbjct: 175 GRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG----KYPPIPPIYSQDLQ 230
Query: 334 DLIRKMLCSQPSERLTAHEVLCHP 357
+ IR ML +P R ++L P
Sbjct: 231 NFIRSMLQVKPKLRPNCDKILASP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 7e-32
Identities = 77/306 (25%), Positives = 127/306 (41%), Gaps = 74/306 (24%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED------VRREIQIMHHLAG 158
++G+G +G Y TG A K I R + E REI+++ L
Sbjct: 5 AQIGEGTYGQVYKARNKKTGELVALKKI-------RMENEKEGFPITAIREIKLLQKL-R 56
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELF--------D--RIIQRG--HYSERKAAELT 206
H NIV +K ++ G ++ D ++ ++E +
Sbjct: 57 HPNIVRLKE----------IVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYM 106
Query: 207 RIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP--GQIFTDVVG 264
+ ++ ++ HS G++HRD+K N L+ ++D LK DFGL+ + +T+ V
Sbjct: 107 KQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRNSADYTNRVI 163
Query: 265 SPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK--GHIDF 320
+ +Y PE+LL YGPE D+W+ G IL L G P F T+ + + + G
Sbjct: 164 TLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTD 223
Query: 321 ESDPWP---------------------------LISDSAKDLIRKMLCSQPSERLTAHEV 353
E+ WP LI SA DL+ K+L P +R++A +
Sbjct: 224 EN--WPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQA 281
Query: 354 LCHPWI 359
L H +
Sbjct: 282 LQHEYF 287
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 1e-31
Identities = 87/277 (31%), Positives = 131/277 (47%), Gaps = 41/277 (14%)
Query: 110 GQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY 169
G +G YL T FA K I+K+ LI R ++ V E I+ A + +V++ ++
Sbjct: 12 GAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILT-FAENPFVVSMFCSF 70
Query: 170 EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI----IVGVVEACHSLGVMHRD 225
E + +VME GG+ + G ++ R+ V +E H+ G++HRD
Sbjct: 71 ETKRHLCMVMEYVEGGDCATLLKNIGALP----VDMARMYFAETVLALEYLHNYGIVHRD 126
Query: 226 LKPENFLLVNKDDDFSLKAIDFGLSVFF--------------KPGQIFTD--VVGSPYYV 269
LKP+N L+ + +K DFGLS K + F D V G+P Y+
Sbjct: 127 LKPDNLLITSMG---HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYI 183
Query: 270 APEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP-- 326
APEV+L+ YG D W G+ILY L G PF+ +T + +F V+ I+ WP
Sbjct: 184 APEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE-----WPEG 238
Query: 327 --LISDSAKDLIRKMLCSQPSERL---TAHEVLCHPW 358
+ A+DLI ++L P ERL A EV H +
Sbjct: 239 DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRF 275
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 2e-31
Identities = 77/271 (28%), Positives = 138/271 (50%), Gaps = 16/271 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISRED-VEDVRREIQIMHHL 156
+ L + LG G +G +L ++ TG +A K + K L+ + VE R E ++ H+
Sbjct: 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHV 61
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
+VT+ A++ +H++++ +GGE+F + QR ++SE + + I+ +E
Sbjct: 62 RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHL 121
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF--KPGQIFTDVVGSPYYVAPEVL 274
H LG+++RD+K EN LL D + + DFGLS F + + G+ Y+APE++
Sbjct: 122 HKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEII 178
Query: 275 LKH--YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332
+G D W+ G++++ LL+G PF E ++ V + + + I A
Sbjct: 179 RGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEA 238
Query: 333 KDLIRKMLCSQPSERL-----TAHEVLCHPW 358
+DL+ K+L P +RL A E+ HP+
Sbjct: 239 QDLLHKLLRKDPKKRLGAGPQGASEIKEHPF 269
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 3e-31
Identities = 89/310 (28%), Positives = 142/310 (45%), Gaps = 69/310 (22%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
+ +G G FG L ++ T +A K++ K ++ R V+ E I+ A ++ +V
Sbjct: 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAE-ADNEWVVK 65
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSLG 220
+ +++D ++ VM+ GG++ +I+ G + E A AELT I E+ H +G
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAI----ESVHKMG 121
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGL---------SVFFKPGQ-------------- 257
+HRD+KP+N L+ D D +K DFGL S +++ G
Sbjct: 122 FIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWS 178
Query: 258 ---------------------IFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILL 295
+ +VG+P Y+APEVLL+ Y D W+ GVILY +L
Sbjct: 179 EIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238
Query: 296 SGVPPFWA----ETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAH 351
G PPF A ETQ + + HI ++ +S A DLI + LC +RL +
Sbjct: 239 VGQPPFLADTPAETQLKVINWETTLHIPSQAK----LSREASDLILR-LCCGAEDRLGKN 293
Query: 352 ---EVLCHPW 358
E+ HP+
Sbjct: 294 GADEIKAHPF 303
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 3e-31
Identities = 84/290 (28%), Positives = 132/290 (45%), Gaps = 41/290 (14%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + K+G+G F TG +A K + K+ S E V ++R EIQ + L+ H
Sbjct: 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCM-KKHFKSLEQVNNLR-EIQALRRLSPHP 58
Query: 161 NIVTIKGAYEDSL--CVHIVMELCAGGELFDRIIQRGHY-SERKAAELTRIIVGVVEACH 217
NI+ + D + +V EL L++ I R E++ ++ ++ H
Sbjct: 59 NILRLIEVLFDRKTGRLALVFEL-MDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH 117
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFG--LSVFFKPGQIFTDVVGSPYYVAPEVLL 275
G+ HRD+KPEN L+ D LK DFG ++ KP +T+ + + +Y APE LL
Sbjct: 118 RNGIFHRDIKPENILI----KDDILKLADFGSCRGIYSKPP--YTEYISTRWYRAPECLL 171
Query: 276 K--HYGPEADVWTAGVILYILLSGVPPFWAETQ----QGIFD-------AVLK-----GH 317
+YGP+ D+W G + + +LS P F + I D VLK H
Sbjct: 172 TDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231
Query: 318 IDFESDP---------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
+++ P S DL++K+L P ER+TA + L HP+
Sbjct: 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 4e-31
Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 29/272 (10%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG + E ATG +A K + K L+++E V E I+ ++ I ++
Sbjct: 9 VGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDIL-SISNSPWIPQLQ 67
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQR--GHYSERKA----AELTRIIVGVVEACHSLG 220
A++D +++VME GG+L ++ R + E A AEL I V H +G
Sbjct: 68 YAFQDKDNLYLVMEYQPGGDLLS-LLNRYEDQFDEDMAQFYLAELVLAIHSV----HQMG 122
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSV-FFKPGQIFTDV-VGSPYYVAPEVLLK-- 276
+HRD+KPEN L+ D +K DFG + + + + VG+P Y+APEVL
Sbjct: 123 YVHRDIKPENVLI---DRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMN 179
Query: 277 -----HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL--KGHIDFESDPWPLIS 329
YG E D W+ GVI Y ++ G PF T ++ ++ + + F D P +S
Sbjct: 180 GDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPED--PKVS 237
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361
DLI+ +LC ERL + CHP+ +
Sbjct: 238 SDFLDLIQSLLCG-QKERLGYEGLCCHPFFSK 268
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 5e-31
Identities = 89/279 (31%), Positives = 143/279 (51%), Gaps = 15/279 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
YT K+GQG GT Y ++ATG E A K ++ ++ +E + + EI +M H
Sbjct: 21 YTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIIN---EILVMRENK-HP 76
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV +Y + +VME AGG L D ++ E + A + R + +E HS
Sbjct: 77 NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 135
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI-FTDVVGSPYYVAPEVLL-KHY 278
V+HRD+K +N LL D S+K DFG P Q + +VG+PY++APEV+ K Y
Sbjct: 136 VIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 192
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
GP+ D+W+ G++ ++ G PP+ E + ++ G + + +P L S +D +
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ-NPEKL-SAIFRDFLN 250
Query: 338 KMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLS 376
+ L +R +A E+L HP++ P SL P + +
Sbjct: 251 RCLEMDVEKRGSAKELLQHPFL--KIAKPLSSLTPLIAA 287
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 8e-31
Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 37/273 (13%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTI 165
K+G+G G + T+ +TG + A K + RK RE + + E+ IM H NIV +
Sbjct: 26 KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFN---EVVIMRDYQ-HPNIVEM 81
Query: 166 KGAY--EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMH 223
+Y D L V VME GG L D I+ +E + A + ++ + H+ GV+H
Sbjct: 82 YSSYLVGDELWV--VMEFLEGGALTD-IVTHTRMNEEQIATVCLAVLKALSFLHAQGVIH 138
Query: 224 RDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV------VGSPYYVAPEVLLKH 277
RD+K ++ LL + D +K DFG Q+ +V VG+PY++APEV+ +
Sbjct: 139 RDIKSDSILLTS---DGRVKLSDFGFC-----AQVSKEVPRRKSLVGTPYWMAPEVISRL 190
Query: 278 -YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK--- 333
YG E D+W+ G+++ ++ G PP++ E L+ + P + + K
Sbjct: 191 PYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-------LQAMKRIRDNLPPKLKNLHKVSP 243
Query: 334 ---DLIRKMLCSQPSERLTAHEVLCHPWICENG 363
+ +ML P++R TA E+L HP++ + G
Sbjct: 244 RLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 1e-30
Identities = 86/259 (33%), Positives = 131/259 (50%), Gaps = 19/259 (7%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L E ATG +A K + K +I++++V E +++ + H + +K
Sbjct: 3 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 61
Query: 167 GAYE--DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
A++ D LC VME GGELF + + ++E +A IV +E HS V++R
Sbjct: 62 YAFQTHDRLC--FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 119
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEA 282
D+K EN +L D D +K DFGL G G+P Y+APEVL + YG
Sbjct: 120 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 176
Query: 283 DVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342
D W GV++Y ++ G PF+ + + +F+ +L I F +S AK L+ +L
Sbjct: 177 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 232
Query: 343 QPSERL-----TAHEVLCH 356
P +RL A EV+ H
Sbjct: 233 DPKQRLGGGPSDAKEVMEH 251
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 2e-30
Identities = 89/295 (30%), Positives = 129/295 (43%), Gaps = 50/295 (16%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMHHLA 157
LG +G+G +G C ATG A K K ED EDV+ RE++++ L
Sbjct: 5 VLGV-VGEGAYGVVLKCRNKATGEIVAIK-----KFKESEDDEDVKKTALREVKVLRQLR 58
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGG--ELFDRIIQRGHYSERKAAELTRIIVGVVEA 215
H+NIV +K A+ +++V E EL + G ++ +
Sbjct: 59 -HENIVNLKEAFRRKGRLYLVFEYVERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAY 115
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF--KPGQIFTDVVGSPYYVAPEV 273
CHS ++HRD+KPEN +LV++ LK DFG + +P TD V + +Y APE+
Sbjct: 116 CHSHNIIHRDIKPEN-ILVSESG--VLKLCDFGFARALRARPASPLTDYVATRWYRAPEL 172
Query: 274 LLK--HYGPEADVWTAGVILYILLSGVPPF------------------WAETQQGIF--D 311
L+ +YG DVW G I+ LL G P F + Q +F +
Sbjct: 173 LVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSN 232
Query: 312 AVLKGHIDFE-SDPWPL-------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
G E S P L +S A D ++ L P ERLT E+L HP+
Sbjct: 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 2e-30
Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 105 RKLGQGQFGTTYLCTEIATGIE-FACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIV 163
R LG G FG L T A K K K+I ++ V+ V E +I++++ H V
Sbjct: 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCV 94
Query: 164 TIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMH 223
+ G+++D +++V+E GGE F + + + IV + E SL +++
Sbjct: 95 NLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVY 154
Query: 224 RDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEA 282
RDLKPEN LL D D +K DFG + + +T + G+P Y+APE+LL +G A
Sbjct: 155 RDLKPENLLL---DKDGFIKMTDFGFAKVVDT-RTYT-LCGTPEYIAPEILLNVGHGKAA 209
Query: 283 DVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342
D WT G+ +Y +L G PPF+A I+ +L+G I F + ++ K L++K+L
Sbjct: 210 DWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK----FLDNNCKHLMKKLLSH 265
Query: 343 QPSERL-----TAHEVLCHPW 358
++R A V HPW
Sbjct: 266 DLTKRYGNLKKGAQNVKEHPW 286
|
Length = 340 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 2e-30
Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 33/274 (12%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
+++ + KLG+G +G+ Y TG A K + ED++++ +EI I+
Sbjct: 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP-----VEEDLQEIIKEISILKQ-CD 56
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFD--RIIQRGHYSERKAAELTRIIVGVVEAC 216
IV G+Y + + IVME C G + D +I + E AA L + + G+
Sbjct: 57 SPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLE-YL 115
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT------DVVGSPYYVA 270
HS +HRD+K N LL +++ K DFG+S GQ+ V+G+P+++A
Sbjct: 116 HSNKKIHRDIKAGNILL---NEEGQAKLADFGVS-----GQLTDTMAKRNTVIGTPFWMA 167
Query: 271 PEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ--QGIFDAVLKGHIDFESDP--W 325
PEV+ + Y +AD+W+ G+ + G PP+ ++ + IF K SDP W
Sbjct: 168 PEVIQEIGYNNKADIWSLGITAIEMAEGKPPY-SDIHPMRAIFMIPNKPPPTL-SDPEKW 225
Query: 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
S D ++K L P ER +A ++L HP+I
Sbjct: 226 ---SPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 3e-30
Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 57/286 (19%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
+L+TL +G+G FG Y + T A K I + + +++ED+++EIQ +
Sbjct: 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRS 58
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
I G++ + I+ME C GG D +++ G E A + R ++ +E H
Sbjct: 59 -PYITKYYGSFLKGSKLWIIMEYCGGGSCLD-LLKPGKLDETYIAFILREVLLGLEYLHE 116
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI-FT-----DVVGSPYYVAPE 272
G +HRD+K N LL + D +K DFG+S GQ+ T VG+P+++APE
Sbjct: 117 EGKIHRDIKAANILLSEEGD---VKLADFGVS-----GQLTSTMSKRNTFVGTPFWMAPE 168
Query: 273 VLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL---- 327
V+ + Y +AD+W+ G+ L G PP SD P+
Sbjct: 169 VIKQSGYDEKADIWSLGITAIELAKGEPPL--------------------SDLHPMRVLF 208
Query: 328 --------------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
S KD + L P ER +A E+L H +I
Sbjct: 209 LIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFI 254
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 3e-30
Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 24/265 (9%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG C ATG +ACK + K++L R+ + E +I+ + IV++
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILE-KVSSRFIVSLA 59
Query: 167 GAYE--DSLCVHIVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLGVM 222
A+E D LC +VM L GG+L I G + E +A I+ +E H ++
Sbjct: 60 YAFETKDDLC--LVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIV 117
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPE 281
+RDLKPEN LL DD +++ D GL+V K G+ G+P Y+APEVL Y
Sbjct: 118 YRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFS 174
Query: 282 ADVWTAGVILYILLSGVPPFWAE----TQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
D + G LY +++G PF ++ + L+ +++ S AKDL
Sbjct: 175 VDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDK----FSPEAKDLCE 230
Query: 338 KMLCSQPSERL-----TAHEVLCHP 357
+L P +RL +A EV HP
Sbjct: 231 ALLQKDPEKRLGCRGGSADEVREHP 255
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 1e-29
Identities = 85/267 (31%), Positives = 140/267 (52%), Gaps = 23/267 (8%)
Query: 105 RKLGQGQFGTTYLC---TEIATGIEFACKSISKRKLI-SREDVEDVRREIQIMHHLAGHK 160
+ LG+G +G + T TG FA K + K ++ +++D + E I+ + H
Sbjct: 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HP 60
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
IV + A++ +++++E +GGELF + + G + E A I +E H G
Sbjct: 61 FIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG 120
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGL---SVFFKPGQIFTDVVGSPYYVAPEVLLKH 277
+++RDLKPEN LL D +K DFGL S+ G + G+ Y+APE+L++
Sbjct: 121 IIYRDLKPENILL---DAQGHVKLTDFGLCKESIH--EGTVTHTFCGTIEYMAPEILMRS 175
Query: 278 -YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336
+G D W+ G ++Y +L+G PPF AE ++ D +LKG ++ P ++ A+DL+
Sbjct: 176 GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLL 231
Query: 337 RKMLCSQPSERL-----TAHEVLCHPW 358
+K+L PS RL A EV HP+
Sbjct: 232 KKLLKRNPSSRLGAGPGDAAEVQSHPF 258
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 1e-29
Identities = 79/264 (29%), Positives = 134/264 (50%), Gaps = 21/264 (7%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN--IVT 164
+G+G FG Y + T +A K +SK++++++++V E I+ ++ IV
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+K +++ +++V + +GGELF + + G +SE +A +V +E H +++R
Sbjct: 61 LKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV----GSPYYVAPEVLL--KHY 278
DLKPEN LL D + DFGLS K G+ Y+APEVLL K Y
Sbjct: 121 DLKPENILL---DATGHIALCDFGLS---KANLTDNKTTNTFCGTTEYLAPEVLLDEKGY 174
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338
D W+ GV+++ + G PF+AE Q ++ + G + F P ++SD + ++
Sbjct: 175 TKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF---PKNVLSDEGRQFVKG 231
Query: 339 MLCSQPSERLTAH----EVLCHPW 358
+L P RL AH E+ HP+
Sbjct: 232 LLNRNPQHRLGAHRDAVELKEHPF 255
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 3e-29
Identities = 87/312 (27%), Positives = 145/312 (46%), Gaps = 73/312 (23%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN--IVT 164
+G+G FG L + TG +A K++ K ++ ++ + V+ E + LA + +V+
Sbjct: 9 IGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDV---LAESDSPWVVS 65
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI----IVGVVEACHSLG 220
+ +++D+ ++++ME GG+L +I+ +SE ++TR V +EA H LG
Sbjct: 66 LYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSE----DVTRFYMAECVLAIEAVHKLG 121
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF------------------KPG------ 256
+HRD+KP+N L+ D +K DFGLS F K
Sbjct: 122 FIHRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNS 178
Query: 257 --------------QIFT----------DVVGSPYYVAPEVLLKH-YGPEADVWTAGVIL 291
QI T VG+P Y+APE+ L+ YG E D W+ G I+
Sbjct: 179 VAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238
Query: 292 YILLSGVPPFWAETQQGIFDAVL--KGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL- 348
+ L G PPF +E + ++ + + F D +S A+DLIR+++ + RL
Sbjct: 239 FECLIGWPPFCSENSHETYRKIINWRETLYFPDD--IHLSVEAEDLIRRLITN-AENRLG 295
Query: 349 --TAHEVLCHPW 358
AHE+ HP+
Sbjct: 296 RGGAHEIKSHPF 307
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 4e-29
Identities = 78/276 (28%), Positives = 140/276 (50%), Gaps = 25/276 (9%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISR-EDVEDVRREIQIMHHL 156
+ L + LG G +G +L +++ +G +A K + K ++ + + E R E Q++ H+
Sbjct: 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 61
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
+VT+ A++ +H++++ GGELF + QR + E++ + IV +E
Sbjct: 62 RQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHL 121
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI--FTDVVGSPYYVAPEVL 274
H LG+++RD+K EN LL D + + DFGLS F ++ G+ Y+AP+++
Sbjct: 122 HKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIV 178
Query: 275 L---KHYGPEADVWTAGVILYILLSGVPPFWAE----TQQGIFDAVLKGHIDFESDPWPL 327
+ D W+ GV++Y LL+G PF + +Q I +LK + + L
Sbjct: 179 RGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL 238
Query: 328 ISDSAKDLIRKMLCSQPSERL-----TAHEVLCHPW 358
AKD+I+++L P +RL A E+ HP+
Sbjct: 239 ----AKDIIQRLLMKDPKKRLGCGPSDADEIKKHPF 270
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 114 bits (289), Expect = 8e-29
Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 28/267 (10%)
Query: 102 TLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
TLG+KLG+G FG Y +E A K++ + S + +E+ RE +IM L
Sbjct: 2 TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDA--SEQQIEEFLREARIMRKL- 58
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC- 216
H N+V + G + ++IVME GG+L + R + + ++L + +
Sbjct: 59 DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYL--RKNRPKLSLSDLLSFALQIARGME 116
Query: 217 --HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG-SPY-YVAPE 272
S +HRDL N L+ ++ +K DFGLS + G P ++APE
Sbjct: 117 YLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPE 173
Query: 273 VLLKH-YGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330
L + + ++DVW+ GV+L+ + + G P+ + + + + + G+ P +
Sbjct: 174 SLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYR------LPQPPN 227
Query: 331 SAKDLIRKML-C--SQPSERLTAHEVL 354
+L ML C P +R T E++
Sbjct: 228 CPPELYDLMLQCWAEDPEDRPTFSELV 254
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 9e-29
Identities = 89/279 (31%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
++ Y L +++G G +G Y +IATG A K I KL +D E +++EI ++
Sbjct: 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVI---KLEPGDDFEIIQQEISMLKE-C 57
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQ--RGHYSERKAAELTRIIVGVVEA 215
H NIV G+Y + IVME C GG L D I Q RG SE + A + R + +
Sbjct: 58 RHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQD-IYQVTRGPLSELQIAYVCRETLKGLAY 116
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV------VGSPYYV 269
H G +HRD+K N LL +D +K DFG+S Q+ + +G+PY++
Sbjct: 117 LHETGKIHRDIKGANILLT---EDGDVKLADFGVS-----AQLTATIAKRKSFIGTPYWM 168
Query: 270 APEVLLKH----YGPEADVWTAGVILYILLSGVPPFW-AETQQGIFDAVLKGHIDFESDP 324
APEV Y + D+W G+ L PP + + +F I + P
Sbjct: 169 APEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF------LISKSNFP 222
Query: 325 WPLISDSAK------DLIRKMLCSQPSERLTAHEVLCHP 357
P + D K D I+K L P +R TA ++L HP
Sbjct: 223 PPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 116 bits (291), Expect = 9e-29
Identities = 86/283 (30%), Positives = 136/283 (48%), Gaps = 23/283 (8%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG + T +A K+I K ++SR +V E ++ + IV +K
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLK 59
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
+++ +++V+ GGELF + + G + +A T ++ +E H V++RDL
Sbjct: 60 FSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDL 119
Query: 227 KPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-VGSPYYVAPEVLLKH-YGPEADV 284
KPEN LL D + DFGL T+ G+P Y+APE+LL H Y D
Sbjct: 120 KPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDW 176
Query: 285 WTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQP 344
WT GV+LY +L+G+PPF+ E ++ +L+ + F AKDL+ +L P
Sbjct: 177 WTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDG----FDRDAKDLLIGLLSRDP 232
Query: 345 SERL---TAHEVLCHPW--------ICENGVAPDRSLDPAVLS 376
+ RL A E+ HP+ + G+ P PAV S
Sbjct: 233 TRRLGYNGAQEIKNHPFFSQLSWKKLLMKGIQP--PFKPAVSS 273
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 115 bits (288), Expect = 1e-28
Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 16/263 (6%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
R LG+G FG C ATG +ACK + K+++ R+ E QI+ + + +V+
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVS 64
Query: 165 IKGAYE--DSLCVHIVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLG 220
+ AYE D+LC +V+ L GG+L I G + E +A I +E H
Sbjct: 65 LAYAYETKDALC--LVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER 122
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYG 279
+++RDLKPEN LL DD ++ D GL+V GQ VG+ Y+APEV+ + Y
Sbjct: 123 IVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 179
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339
D W G +LY +++G PF ++ + V + + + + S A+ L + +
Sbjct: 180 FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKML 239
Query: 340 LCSQPSERL-----TAHEVLCHP 357
LC P ERL A EV HP
Sbjct: 240 LCKDPKERLGCQGGGAREVKEHP 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 116 bits (291), Expect = 1e-28
Identities = 80/269 (29%), Positives = 140/269 (52%), Gaps = 26/269 (9%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG + TG +A K ++K +++ R + R E ++ + + I +
Sbjct: 9 IGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVN-GDRRWITNLH 67
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI----IVGVVEACHSLGVM 222
A++D +++VM+ GG+L + + +R ++ R +V +++ H LG +
Sbjct: 68 YAFQDENNLYLVMDYYVGGDLLTLL---SKFEDRLPEDMARFYLAEMVLAIDSVHQLGYV 124
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTDV-VGSPYYVAPEVL------ 274
HRD+KP+N LL D + ++ DFG + G + ++V VG+P Y++PE+L
Sbjct: 125 HRDIKPDNVLL---DKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDG 181
Query: 275 LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL--KGHIDFESDPWPLISDSA 332
YGPE D W+ GV +Y +L G PF+AE+ + ++ K H F D +S+ A
Sbjct: 182 KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDV-TDVSEEA 240
Query: 333 KDLIRKMLCSQPSERL---TAHEVLCHPW 358
KDLIR+++CS P RL + HP+
Sbjct: 241 KDLIRRLICS-PETRLGRNGLQDFKDHPF 268
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 117 bits (293), Expect = 1e-28
Identities = 96/325 (29%), Positives = 145/325 (44%), Gaps = 65/325 (20%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
+ LG G FG L ++ T +A K++ K+ +++R V V+ E I+ A ++ +V
Sbjct: 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE-ADNEWVVK 65
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSLG 220
+ +++D ++ VM+ GG++ +I+ + E A AELT I E+ H +G
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAI----ESVHKMG 121
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK--------------------PGQIFT 260
+HRD+KP+N L+ D D +K DFGL F+ P ++
Sbjct: 122 FIHRDIKPDNILI---DLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWD 178
Query: 261 DV----------------------------VGSPYYVAPEVLL-KHYGPEADVWTAGVIL 291
DV VG+P Y+APEVLL K Y D W+ GVIL
Sbjct: 179 DVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238
Query: 292 YILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL--- 348
+ +L G PPF A T V+ P +S A DLI K+ CS ERL
Sbjct: 239 FEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSA-EERLGRN 297
Query: 349 TAHEVLCHPWICENGVAPDRSLDPA 373
A ++ HP+ E + D PA
Sbjct: 298 GADDIKAHPFFSEVDFSSDIRTQPA 322
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 1e-28
Identities = 78/271 (28%), Positives = 137/271 (50%), Gaps = 25/271 (9%)
Query: 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED-VEDVRREIQIMHHL-- 156
LY +G+G +G Y + TG A K I+ L + +D V D++RE+ ++ L
Sbjct: 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIIN---LDTPDDDVSDIQREVALLSQLRQ 58
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEA 215
+ NI G+Y + I+ME GG + R + + G +E+ + + R ++ ++
Sbjct: 59 SQPPNITKYYGSYLKGPRLWIIMEYAEGGSV--RTLMKAGPIAEKYISVIIREVLVALKY 116
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI-FTDVVGSPYYVAPEVL 274
H +GV+HRD+K N L+ N + +K DFG++ + VG+PY++APEV+
Sbjct: 117 IHKVGVIHRDIKAANILVTNTGN---VKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVI 173
Query: 275 L--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAV-LKGHID---FESDPWPLI 328
K+Y +AD+W+ G+ +Y + +G PP+ + F A+ L E + +
Sbjct: 174 TEGKYYDTKADIWSLGITIYEMATGNPPY---SDVDAFRAMMLIPKSKPPRLEDNGY--- 227
Query: 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
S ++ + L +P ERL+A E+L WI
Sbjct: 228 SKLLREFVAACLDEEPKERLSAEELLKSKWI 258
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 2e-28
Identities = 91/305 (29%), Positives = 135/305 (44%), Gaps = 62/305 (20%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR---REIQIMHHLA 157
Y L + +G G +G + TG + A K IS +D+ D + REI+++ HL
Sbjct: 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISN----VFDDLIDAKRILREIKLLRHLR 57
Query: 158 GHKNIVTIK-----GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE------LT 206
H+NI+ + + ED V+IV EL +L ++I S + + L
Sbjct: 58 -HENIIGLLDILRPPSPEDFNDVYIVTEL-METDL-HKVI----KSPQPLTDDHIQYFLY 110
Query: 207 RIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS----VFFKPGQIFTDV 262
+I+ G+ + HS V+HRDLKP N +LVN + D LK DFGL+ T+
Sbjct: 111 QILRGL-KYLHSANVIHRDLKPSN-ILVNSNCD--LKICDFGLARGVDPDEDEKGFLTEY 166
Query: 263 VGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAET---Q-QGIFDAVLKG 316
V + +Y APE+LL Y D+W+ G I LL+ P F Q I + +
Sbjct: 167 VVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTP 226
Query: 317 H---IDFESD----------------PW----PLISDSAKDLIRKMLCSQPSERLTAHEV 353
+ F + P P S A DL+ KML P +R+TA E
Sbjct: 227 SEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEA 286
Query: 354 LCHPW 358
L HP+
Sbjct: 287 LAHPY 291
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 2e-28
Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 15/265 (5%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
R LG+G FG L +G +A K + K ++ +DVE E +I+ H +
Sbjct: 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+ ++ + VME GG+L I + + E +A I + H G+++R
Sbjct: 61 LYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEA 282
DLK +N LL D + K DFG+ G+ + G+P Y+APE+L + YGP
Sbjct: 121 DLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSV 177
Query: 283 DVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342
D W GV+LY +L G PF AE + +F+A+L + + + W +S A D+++ +
Sbjct: 178 DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LSQDAVDILKAFMTK 233
Query: 343 QPSERLTA------HEVLCHPWICE 361
P+ RL + +L HP+ E
Sbjct: 234 NPTMRLGSLTLGGEEAILRHPFFKE 258
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 2e-28
Identities = 88/279 (31%), Positives = 144/279 (51%), Gaps = 15/279 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
YT K+GQG GT + ++ATG E A K I+ +K +E + + EI +M L +
Sbjct: 21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIIN---EILVMKELK-NP 76
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV ++ + +VME AGG L D ++ E + A + R + +E H+
Sbjct: 77 NIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMDEAQIAAVCRECLQALEFLHANQ 135
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI-FTDVVGSPYYVAPEVLL-KHY 278
V+HRD+K +N LL S+K DFG P Q + +VG+PY++APEV+ K Y
Sbjct: 136 VIHRDIKSDNVLLGMDG---SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 192
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
GP+ D+W+ G++ ++ G PP+ E + ++ G + + +P L S +D +
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ-NPEKL-SPIFRDFLN 250
Query: 338 KMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLS 376
+ L +R +A E+L HP++ P SL P +L+
Sbjct: 251 RCLEMDVEKRGSAKELLQHPFL--KLAKPLSSLTPLILA 287
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 3e-28
Identities = 56/146 (38%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDN 454
+A+ L+EE+IA KE F D D G IT EL +R G + E++D+++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 455 SGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDV 511
+GTID+ EF+ + + EE + AF+ FD+DG+G+I+ EL+ +TD
Sbjct: 61 NGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 512 LLEDIIREVDQDNDGRIDYGEFVAMM 537
++++IRE D D DG+I+Y EFV MM
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKMM 146
|
Length = 149 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 3e-28
Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
+ LG+G FG L T +A K + K ++ +DVE E +++ H +
Sbjct: 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQ 60
Query: 165 IKGAY--EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVM 222
+ + +D L VME GG+L I + G + E +A IV ++ H G++
Sbjct: 61 LHSCFQTKDRLF--FVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGII 118
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK----PGQIFTDVVGSPYYVAPEVLLKH- 277
+RDLK +N LL D + +K DFG+ K G + G+P Y+APE+L
Sbjct: 119 YRDLKLDNVLL---DSEGHIKIADFGMC---KEGILGGVTTSTFCGTPDYIAPEILSYQP 172
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
YGP D W GV+LY +L+G PF + + +F ++L+ + + W +S AK +++
Sbjct: 173 YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR--W--LSKEAKSILK 228
Query: 338 KMLCSQPSERLTAH-----EVLCHP 357
L P +RL ++ HP
Sbjct: 229 SFLTKNPEKRLGCLPTGEQDIKGHP 253
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 3e-28
Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
L+EE+I LKE F+ D D+ G I +EL LR G + EI L + D N T+
Sbjct: 14 LTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDAGN-ETV 72
Query: 459 DYGEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLED 515
D+ EF+ +V L + ++EE L AF+ FDKD GYI++ EL++ ++D +E
Sbjct: 73 DFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEK 132
Query: 516 IIREVDQDNDGRIDYGEFVAMM 537
+++E D+D DG IDY EF ++
Sbjct: 133 LLKEYDEDGDGEIDYEEFKKLI 154
|
Length = 160 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 4e-28
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 27/267 (10%)
Query: 102 TLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
TLG+KLG+G FG Y T +E A K++ + S + +E+ RE +IM L
Sbjct: 2 TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDA--SEQQIEEFLREARIMRKL- 58
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC- 216
H NIV + G + + IVME GG+L D + + E ++L + +
Sbjct: 59 DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRP-KELSLSDLLSFALQIARGME 117
Query: 217 --HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG-SPY-YVAPE 272
S +HRDL N L+ ++ +K DFGLS + G P ++APE
Sbjct: 118 YLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPE 174
Query: 273 VLLKH-YGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330
L + + ++DVW+ GV+L+ + + G P+ + + + + KG+ P +
Sbjct: 175 SLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRL------PKPPN 228
Query: 331 SAKDLIRKML-C--SQPSERLTAHEVL 354
+L + ML C P +R T E++
Sbjct: 229 CPPELYKLMLQCWAEDPEDRPTFSELV 255
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 9e-28
Identities = 81/294 (27%), Positives = 126/294 (42%), Gaps = 44/294 (14%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDV-EDVRREIQIMHHL--A 157
Y ++G+G +GT Y ++ TG A K + R +S E + REI ++ L
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKV--RVPLSEEGIPLSTLREIALLKQLESF 58
Query: 158 GHKNIVTI-----KGAYEDSLCVHIVMELC----AGGELFDRIIQRGHYSERKAAELTRI 208
H NIV + + L + +V E A + + G +L R
Sbjct: 59 EHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLAT--YLSKCPKPG-LPPETIKDLMRQ 115
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYY 268
++ V+ HS ++HRDLKP+N +LV D +K DFGL+ + T VV + +Y
Sbjct: 116 LLRGVDFLHSHRIVHRDLKPQN-ILVTSDG--QVKIADFGLARIYSFEMALTSVVVTLWY 172
Query: 269 VAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ----QGIFD------------ 311
APEVLL+ Y D+W+ G I L P F ++ IFD
Sbjct: 173 RAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPR 232
Query: 312 --AVLKGHIDF-----ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
++ + P I + DL++KML P +R++A E L HP+
Sbjct: 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 2e-27
Identities = 83/260 (31%), Positives = 130/260 (50%), Gaps = 17/260 (6%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + R +G+G FG L + + ++A K I R S VED R+E ++ + H
Sbjct: 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEI--RLPKSSSAVEDSRKEAVLLAKMK-HP 58
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRI-IQRGH-YSERKAAE-LTRIIVGVVEACH 217
NIV K ++E ++IVME C GG+L +I +QRG + E + ++ +G V+ H
Sbjct: 59 NIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLG-VQHIH 117
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVLLK 276
V+HRD+K +N L + +K DFG + + PG VG+PYYV PE+
Sbjct: 118 EKRVLHRDIKSKNIFLTQ---NGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWEN 174
Query: 277 H-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL-ISDSAKD 334
Y ++D+W+ G ILY L + PF A + + + V +G P P S +
Sbjct: 175 MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY----KPLPSHYSYELRS 230
Query: 335 LIRKMLCSQPSERLTAHEVL 354
LI++M P R +A +L
Sbjct: 231 LIKQMFKRNPRSRPSATTIL 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 2e-27
Identities = 89/306 (29%), Positives = 136/306 (44%), Gaps = 57/306 (18%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
+ LG G FG L ++ T +A K++ K+ ++ R V V+ E I+ A ++ +V
Sbjct: 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE-ADNEWVVR 65
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+ +++D ++ VM+ GG++ +I+ G + E A + VE+ H +G +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHR 125
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGLSVFFK-------------PGQIFTD---------- 261
D+KP+N L+ D D +K DFGL F+ Q D
Sbjct: 126 DIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPAN 182
Query: 262 -------------------------VVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILL 295
+VG+P Y+APEVLL+ Y D W+ GVILY +L
Sbjct: 183 CRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 242
Query: 296 SGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL---TAHE 352
G PPF A+T V+ P +S A DLI K LC P +RL A E
Sbjct: 243 VGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIK-LCRGPEDRLGKNGADE 301
Query: 353 VLCHPW 358
+ HP+
Sbjct: 302 IKAHPF 307
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 2e-27
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 24/272 (8%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSI--SKRKLISREDVEDVRREIQIMHHLAG 158
+ LG+ LGQG FG YLC + TG E A K + + ++V + EIQ++ +L
Sbjct: 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL- 62
Query: 159 HKNIVTIKGAYEDSL--CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
H+ IV G D + + I ME GG + D++ G +E + TR I+ V
Sbjct: 63 HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYL 122
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK----PGQIFTDVVGSPYYVAPE 272
HS ++HRD+K N L +D ++K DFG S + G V G+PY+++PE
Sbjct: 123 HSNMIVHRDIKGANIL---RDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPE 179
Query: 273 VLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQ--QGIFDAVLKGHIDFESDPW--PL 327
V+ + YG +AD+W+ G + +L+ PP WAE + IF + ++P P
Sbjct: 180 VISGEGYGRKADIWSVGCTVVEMLTEKPP-WAEFEAMAAIFKIATQ-----PTNPVLPPH 233
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+SD +D ++++ + R +A E+L H ++
Sbjct: 234 VSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 3e-27
Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 20/260 (7%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L E ATG +A K + K ++++++V E +++ + + H + +K
Sbjct: 3 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 61
Query: 167 GAYE--DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMH 223
+++ D LC VME GGELF + + +SE +A IV ++ HS V++
Sbjct: 62 YSFQTHDRLC--FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 119
Query: 224 RDLKPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPE 281
RDLK EN +L D D +K DFGL K G G+P Y+APEVL + YG
Sbjct: 120 RDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA 176
Query: 282 ADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341
D W GV++Y ++ G PF+ + + +F+ +L I F +S AK L+ +L
Sbjct: 177 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LSPEAKSLLSGLLK 232
Query: 342 SQPSERL-----TAHEVLCH 356
P +RL A E++ H
Sbjct: 233 KDPKQRLGGGPDDAKEIMQH 252
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 4e-27
Identities = 84/265 (31%), Positives = 132/265 (49%), Gaps = 18/265 (6%)
Query: 104 GRKLGQGQFGTTYLCTEIATGIEFACKSIS--KRKLISREDVEDVRREIQIMHHLAGHKN 161
G+ LGQG FG YLC ++ TG E A K + + ++V + EIQ++ +L H+
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HER 65
Query: 162 IVTIKGAYED--SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL 219
IV G D + I ME GG + D++ G +E + TR I+ + HS
Sbjct: 66 IVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN 125
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFG----LSVFFKPGQIFTDVVGSPYYVAPEVLL 275
++HRD+K N L +D ++K DFG L G V G+PY+++PEV+
Sbjct: 126 MIVHRDIKGANIL---RDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS 182
Query: 276 -KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL-ISDSAK 333
+ YG +ADVW+ G + +L+ PP WAE + A+ K + P IS+ A+
Sbjct: 183 GEGYGRKADVWSLGCTVVEMLTEKPP-WAEYEA--MAAIFKIATQPTNPQLPSHISEHAR 239
Query: 334 DLIRKMLCSQPSERLTAHEVLCHPW 358
D + + + R +A E+L HP+
Sbjct: 240 DFLGCIFV-EARHRPSAEELLRHPF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 4e-27
Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 36/306 (11%)
Query: 95 DNIRDL------YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR 148
+ IRDL Y + + +G+G FG L +T +A K +SK ++I R D
Sbjct: 33 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 92
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI 208
E IM A +V + A++D +++VME GG+L + ++ E+ A T
Sbjct: 93 ERDIMA-FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 150
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV-FFKPGQIFTDV-VGSP 266
+V ++A HS+G +HRD+KP+N LL D LK DFG + K G + D VG+P
Sbjct: 151 VVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 207
Query: 267 YYVAPEVLLK-----HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL--KGHID 319
Y++PEVL +YG E D W+ GV LY +L G PF+A++ G + ++ K +
Sbjct: 208 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT 267
Query: 320 FESDPWPLISDSAKDLIRKMLCSQPSE--RLTAHEVLCHP------WICEN------GVA 365
F D IS AK+LI L + R E+ H W E V
Sbjct: 268 FPDD--NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVV 325
Query: 366 PDRSLD 371
PD S D
Sbjct: 326 PDLSSD 331
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 4e-27
Identities = 84/290 (28%), Positives = 145/290 (50%), Gaps = 35/290 (12%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTI 165
K+G+G G + E +G + A K + RK RE + + E+ IM H+N+V +
Sbjct: 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFN---EVVIMRDYQ-HQNVVEM 83
Query: 166 KGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRD 225
+Y + ++ME GG L D I+ + +E + A + ++ + HS GV+HRD
Sbjct: 84 YKSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRD 142
Query: 226 LKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV------VGSPYYVAPEVLLKH-Y 278
+K ++ LL D +K DFG QI DV VG+PY++APEV+ + Y
Sbjct: 143 IKSDSILLTL---DGRVKLSDFGFC-----AQISKDVPKRKSLVGTPYWMAPEVISRTPY 194
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK----- 333
G E D+W+ G+++ ++ G PP+++++ ++ P P + ++ K
Sbjct: 195 GTEVDIWSLGIMVIEMVDGEPPYFSDSP-------VQAMKRLRDSPPPKLKNAHKISPVL 247
Query: 334 -DLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFS 382
D + +ML +P ER TA E+L HP++ + G+ L P + K+ S
Sbjct: 248 RDFLERMLTREPQERATAQELLDHPFLLQTGLP--ECLVPLIQQYRKRTS 295
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 4e-27
Identities = 87/266 (32%), Positives = 138/266 (51%), Gaps = 29/266 (10%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L E A+G +A K + K +I++++V E +++ + H + ++K
Sbjct: 3 LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN-TRHPFLTSLK 61
Query: 167 GAYE--DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+++ D LC VME GGELF + + +SE + IV ++ HS +++R
Sbjct: 62 YSFQTKDRLC--FVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYR 119
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV------GSPYYVAPEVLLKH- 277
DLK EN +L D D +K DFGL K G TD G+P Y+APEVL +
Sbjct: 120 DLKLENLML---DKDGHIKITDFGLC---KEG--ITDAATMKTFCGTPEYLAPEVLEDND 171
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
YG D W GV++Y ++ G PF+ + + +F+ +L I F P L +D AK L+
Sbjct: 172 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKF---PRTLSAD-AKSLLS 227
Query: 338 KMLCSQPSERL-----TAHEVLCHPW 358
+L P++RL A E++ H +
Sbjct: 228 GLLIKDPNKRLGGGPDDAKEIMRHSF 253
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 110 bits (275), Expect = 8e-27
Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 16/265 (6%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
R LG+G FG C ATG +ACK + K+++ R+ E QI+ + + +V
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVN 64
Query: 165 IKGAYE--DSLCVHIVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLG 220
+ AYE D+LC +V+ + GG+L I G+ + E +A I+ +E H
Sbjct: 65 LAYAYETKDALC--LVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN 122
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYG 279
++RDLKPEN LL DD ++ D GL+V G+ VG+ Y+APEVL + Y
Sbjct: 123 TVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYT 179
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339
D W G ++Y ++ G PF ++ + V + ++ E S+ AK + + +
Sbjct: 180 LSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKML 239
Query: 340 LCSQPSERL-----TAHEVLCHPWI 359
L P +RL A EV HP+
Sbjct: 240 LTKDPKQRLGCQEEGAGEVKRHPFF 264
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 1e-26
Identities = 86/279 (30%), Positives = 142/279 (50%), Gaps = 15/279 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
YT K+GQG GT Y +IATG E A K ++ ++ +E + + EI +M +
Sbjct: 21 YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIIN---EILVMRE-NKNP 76
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV +Y + +VME AGG L D ++ E + A + R + ++ HS
Sbjct: 77 NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALDFLHSNQ 135
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI-FTDVVGSPYYVAPEVLL-KHY 278
V+HRD+K +N LL D S+K DFG P Q + +VG+PY++APEV+ K Y
Sbjct: 136 VIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 192
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
GP+ D+W+ G++ ++ G PP+ E + ++ G + ++ +S +D +
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP--ERLSAVFRDFLN 250
Query: 338 KMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLS 376
+ L R +A E+L HP++ P SL P +++
Sbjct: 251 RCLEMDVDRRGSAKELLQHPFL--KLAKPLSSLTPLIIA 287
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 2e-26
Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 44/282 (15%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSI---SKRKLISREDVEDVRREIQIMHH 155
DL LG +LG G G TG A K+I + + + RE+ I+H
Sbjct: 2 DLEYLG-ELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQ-----ILRELDILHK 55
Query: 156 LAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVV 213
IV GA+ ++ + I ME GG L D+I++ G ER L +I V V+
Sbjct: 56 -CNSPYIVGFYGAFYNNGDISICMEYMDGGSL-DKILKEVQGRIPERI---LGKIAVAVL 110
Query: 214 EAC----HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV----VGS 265
+ ++HRD+KP N L+ ++ +K DFG+S GQ+ + VG+
Sbjct: 111 KGLTYLHEKHKIIHRDVKPSNILVNSRGQ---IKLCDFGVS-----GQLVNSLAKTFVGT 162
Query: 266 PYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQ--GIFDAVLKGHIDFE- 321
Y+APE + Y ++D+W+ G+ L L +G P+ E GIF+ +L+ ++
Sbjct: 163 SSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFE-LLQYIVNEPP 221
Query: 322 ----SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
S + S +D + L P ER + E+L HP+I
Sbjct: 222 PRLPSGKF---SPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 2e-26
Identities = 80/265 (30%), Positives = 129/265 (48%), Gaps = 25/265 (9%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH--HLAGHKNIVT 164
LG+G FG L TG +A K++ K +I+R++VE + E +I + H +V
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+ ++ V VME AGG+L I +SE +A +V ++ H +++R
Sbjct: 67 LFACFQTEDHVCFVMEYAAGGDLM-MHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYR 125
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV----GSPYYVAPEVLL-KHYG 279
DLK +N LL D + +K DFGL K G F D G+P ++APEVL Y
Sbjct: 126 DLKLDNLLL---DTEGFVKIADFGLC---KEGMGFGDRTSTFCGTPEFLAPEVLTETSYT 179
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL-ISDSAKDLIRK 338
D W GV++Y +L G PF + ++ +FD+++ + +P +S A ++R+
Sbjct: 180 RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVN-----DEVRYPRFLSREAISIMRR 234
Query: 339 MLCSQPSERL-----TAHEVLCHPW 358
+L P RL A +V P+
Sbjct: 235 LLRRNPERRLGSGEKDAEDVKKQPF 259
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 2e-26
Identities = 77/269 (28%), Positives = 139/269 (51%), Gaps = 13/269 (4%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTI 165
K+G+G G + T ++G A K + RK RE + + E+ IM H+N+V +
Sbjct: 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQ-HENVVEM 82
Query: 166 KGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRD 225
+Y + +VME GG L D I+ +E + A + ++ + H+ GV+HRD
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRD 141
Query: 226 LKPENFLLVNKDDDFSLKAIDFGLSV-FFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEAD 283
+K ++ LL + D +K DFG K +VG+PY++APE++ + YGPE D
Sbjct: 142 IKSDSILLTH---DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVD 198
Query: 284 VWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQ 343
+W+ G+++ ++ G PP++ E +++ ++ + +S S K + ++L
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPKLKNLHKVSPSLKGFLDRLLVRD 257
Query: 344 PSERLTAHEVLCHPWICENGVAPDRSLDP 372
P++R TA E+L HP++ + G P + P
Sbjct: 258 PAQRATAAELLKHPFLAKAG--PPSCIVP 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 3e-26
Identities = 70/248 (28%), Positives = 125/248 (50%), Gaps = 9/248 (3%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG L A G +A K + K+ ++ +++ + + E ++ H +V +
Sbjct: 3 IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
+++ + ++ V++ GGELF + + + E +A I + HSL +++RDL
Sbjct: 63 YSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDL 122
Query: 227 KPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADV 284
KPEN LL D + DFGL + + + G+P Y+APEVL K Y D
Sbjct: 123 KPENILL---DSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDW 179
Query: 285 WTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQP 344
W G +LY +L G+PPF++ ++D +L + + + IS SA+ L+ +L
Sbjct: 180 WCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPN----ISVSARHLLEGLLQKDR 235
Query: 345 SERLTAHE 352
++RL A +
Sbjct: 236 TKRLGAKD 243
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 4e-26
Identities = 77/272 (28%), Positives = 124/272 (45%), Gaps = 41/272 (15%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG L + TG +A K + K ++ +E V +R E I+ A +V +
Sbjct: 9 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVE-ADSLWVVKMF 67
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
+++D L ++++ME GG++ ++++ +E + V +++ H LG +HRD+
Sbjct: 68 YSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDI 127
Query: 227 KPENFLLVNKDDDFSLKAIDFGLSVFFKPG------------------------------ 256
KP+N LL D +K DFGL K
Sbjct: 128 KPDNLLL---DSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAET 184
Query: 257 ------QIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGI 309
Q+ VG+P Y+APEV ++ Y D W+ GVI+Y +L G PPF +ET Q
Sbjct: 185 WKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET 244
Query: 310 FDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341
+ V+ P IS+ AKDLI + C
Sbjct: 245 YKKVMNWKETLIFPPEVPISEKAKDLILRFCC 276
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 4e-26
Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 45/292 (15%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG L + TG +A K + K ++ +E V +R E I+ G +V +
Sbjct: 9 IGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG-AWVVKMF 67
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
+++D ++++ME GG++ ++++ SE V ++A H LG +HRD+
Sbjct: 68 YSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDI 127
Query: 227 KPENFLLVNKDDDFSLKAIDFGLSVFFKPG------------------------------ 256
KP+N LL D +K DFGL K
Sbjct: 128 KPDNLLL---DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAET 184
Query: 257 ------QIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGI 309
Q+ VG+P Y+APEV ++ Y D W+ GVI+Y +L G PPF +ET Q
Sbjct: 185 WKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET 244
Query: 310 FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL---TAHEVLCHPW 358
+ V+ P IS+ AKDLI + C+ R+ E+ HP+
Sbjct: 245 YRKVMNWKETLVFPPEVPISEKAKDLILR-FCTDSENRIGSNGVEEIKSHPF 295
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 4e-26
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 16/264 (6%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L T +A K + K ++ +DV+ E +I+ A H + +
Sbjct: 3 LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALH 62
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
++ + VME GG+L +I + + E ++ + + H GV++RDL
Sbjct: 63 CCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDL 122
Query: 227 KPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADV 284
K +N LL D + K DFG+ G T G+P Y+APE+L + YGP D
Sbjct: 123 KLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDW 179
Query: 285 WTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQP 344
W GV++Y +++G PPF A+ + +F+++L H D W +S A +++ + P
Sbjct: 180 WALGVLMYEMMAGQPPFEADNEDDLFESIL--HDDVLYPVW--LSKEAVSILKAFMTKNP 235
Query: 345 SERL-------TAHEVLCHPWICE 361
++RL + HP+ E
Sbjct: 236 NKRLGCVASQGGEDAIKQHPFFKE 259
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 5e-26
Identities = 68/264 (25%), Positives = 136/264 (51%), Gaps = 14/264 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y +K+G+G FG L G ++ K I+ K+ +E E+ R+E+ ++ ++ H
Sbjct: 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKER-EESRKEVAVLSNMK-HP 59
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRI-IQRG-HYSERKAAELTRIIVGVVEACHS 218
NIV + ++E++ ++IVM+ C GG+L+ +I QRG + E + + I ++ H
Sbjct: 60 NIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD 119
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVLL-K 276
++HRD+K +N L D ++K DFG++ V ++ +G+PYY++PE+ +
Sbjct: 120 RKILHRDIKSQNIFLTK---DGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENR 176
Query: 277 HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL-ISDSAKDL 335
Y ++D+W G +LY + + F A + + +++G P S ++L
Sbjct: 177 PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY----PPVSSHYSYDLRNL 232
Query: 336 IRKMLCSQPSERLTAHEVLCHPWI 359
+ ++ P +R + + +L +I
Sbjct: 233 VSQLFKRNPRDRPSVNSILEKNFI 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 6e-26
Identities = 86/269 (31%), Positives = 138/269 (51%), Gaps = 18/269 (6%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + + +G+G FG L ++ +A K +SK ++I R D E IM A
Sbjct: 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 103
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
+V + A++D +++VME GG+L + ++ E+ A T +V ++A HS+G
Sbjct: 104 WVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMG 162
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDV-VGSPYYVAPEVLLK-- 276
++HRD+KP+N LL D LK DFG + + G + D VG+P Y++PEVL
Sbjct: 163 LIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQG 219
Query: 277 ---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL--KGHIDFESDPWPLISDS 331
+YG E D W+ GV L+ +L G PF+A++ G + ++ K ++F D IS
Sbjct: 220 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVE--ISKH 277
Query: 332 AKDLIRKMLCSQPSE--RLTAHEVLCHPW 358
AK+LI L + R E+ HP+
Sbjct: 278 AKNLICAFLTDREVRLGRNGVEEIKQHPF 306
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 107 bits (267), Expect = 1e-25
Identities = 88/277 (31%), Positives = 138/277 (49%), Gaps = 15/277 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
YT K+GQG GT Y ++ATG E A I + L + E + EI +M +
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRE-NKNP 77
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV +Y + +VME AGG L D ++ E + A + R + +E HS
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI-FTDVVGSPYYVAPEVLL-KHY 278
V+HRD+K +N LL D S+K DFG P Q + +VG+PY++APEV+ K Y
Sbjct: 137 VIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 193
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
GP+ D+W+ G++ ++ G PP+ E + ++ G + + +P L S +D +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ-NPEKL-SAIFRDFLN 251
Query: 338 KMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAV 374
+ L +R +A E+L H ++ P SL P +
Sbjct: 252 RCLDMDVEKRGSAKELLQHQFL--KIAKPLSSLTPLI 286
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 1e-25
Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 3/147 (2%)
Query: 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGT 457
L+E++ ++E F DTD SG I ELK +R G K EI+ ++ D D SG
Sbjct: 10 GLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGK 69
Query: 458 IDYGEFI-AATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLE 514
ID+ EF+ T L + + E ++ AF+ FD D +G I++ L++ E +TD L+
Sbjct: 70 IDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQ 129
Query: 515 DIIREVDQDNDGRIDYGEFVAMMQKGN 541
++I E D++ DG I EF +M+K N
Sbjct: 130 EMIDEADRNGDGEISEEEFYRIMKKTN 156
|
Length = 158 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 107 bits (267), Expect = 2e-25
Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 9/246 (3%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG L A +A K + K+ ++ +++ + + E ++ H +V +
Sbjct: 3 IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
+++ + ++ V++ GGELF + + + E +A I + HSL +++RDL
Sbjct: 63 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 122
Query: 227 KPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADV 284
KPEN LL D + DFGL + + G+P Y+APEVL K Y D
Sbjct: 123 KPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDW 179
Query: 285 WTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQP 344
W G +LY +L G+PPF++ ++D +L + + P I++SA+ L+ +L
Sbjct: 180 WCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDR 235
Query: 345 SERLTA 350
++RL A
Sbjct: 236 TKRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 105 bits (262), Expect = 4e-25
Identities = 82/267 (30%), Positives = 136/267 (50%), Gaps = 33/267 (12%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTI 165
K+G+G G + TE TG + A K + RK RE + + E+ IM H+N+V +
Sbjct: 29 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN---EVVIMRDYH-HENVVDM 84
Query: 166 KGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRD 225
+Y + +VME GG L D I+ +E + A + ++ + H+ GV+HRD
Sbjct: 85 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 143
Query: 226 LKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV------VGSPYYVAPEVLLK-HY 278
+K ++ LL + D +K DFG Q+ +V VG+PY++APEV+ + Y
Sbjct: 144 IKSDSILLTS---DGRIKLSDFGFC-----AQVSKEVPKRKSLVGTPYWMAPEVISRLPY 195
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK--DLI 336
G E D+W+ G+++ ++ G PP++ E L+ + P + DS K ++
Sbjct: 196 GTEVDIWSLGIMVIEMIDGEPPYFNEPP-------LQAMRRIRDNLPPRVKDSHKVSSVL 248
Query: 337 RK----MLCSQPSERLTAHEVLCHPWI 359
R ML +PS+R TA E+L HP++
Sbjct: 249 RGFLDLMLVREPSQRATAQELLQHPFL 275
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 7e-25
Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 12/261 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y R LG+G FG L K ++ +L +E D EI I+ L H
Sbjct: 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKE-RRDALNEIVILSLLQ-HP 59
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHS 218
NI+ + D + I ME GG L+D+I+++ + E IV V H
Sbjct: 60 NIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK 119
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-VVGSPYYVAPEVLL-K 276
G++HRD+K N L K +K DFG+S + VVG+PYY++PE+
Sbjct: 120 AGILHRDIKTLNIFL-TKAG--LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGV 176
Query: 277 HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336
Y ++D+W G +LY LL+ F A + +++G+ + S L+
Sbjct: 177 KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVY---SSELISLV 233
Query: 337 RKMLCSQPSERLTAHEVLCHP 357
+L P +R TA EVL P
Sbjct: 234 HSLLQQDPEKRPTADEVLDQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-24
Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 16/263 (6%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
R LG+G FG C ATG +ACK + K+++ R+ E +I+ + + +V+
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVS 64
Query: 165 IKGAYE--DSLCVHIVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLG 220
+ AYE D+LC +V+ + GG+L I G+ + E++A + +E
Sbjct: 65 LAYAYETKDALC--LVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER 122
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYG 279
+++RDLKPEN LL DD ++ D GL+V G+ VG+ Y+APEV+ + Y
Sbjct: 123 IVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYT 179
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339
D W G ++Y ++ G PF ++ + V + + + + S+ AK + R +
Sbjct: 180 FSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRML 239
Query: 340 LCSQPSERL-----TAHEVLCHP 357
L P ERL A V HP
Sbjct: 240 LTKNPKERLGCRGNGAAGVKQHP 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 2e-24
Identities = 88/283 (31%), Positives = 133/283 (46%), Gaps = 30/283 (10%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
N D++ + +LG G FG Y TG+ A K I ++ S E++ED EI I+
Sbjct: 2 NPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKII---QIESEEELEDFMVEIDILSE 58
Query: 156 LAGHKNIVTIKGAY--EDSLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGV 212
H NIV + AY E+ L I++E C GG L +++ +E + + R ++
Sbjct: 59 CK-HPNIVGLYEAYFYENKLW--ILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEA 115
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-QIFTDVVGSPYYVAP 271
+ HS V+HRDLK N LL D +K DFG+S K Q +G+PY++AP
Sbjct: 116 LNFLHSHKVIHRDLKAGNILLTLDGD---VKLADFGVSAKNKSTLQKRDTFIGTPYWMAP 172
Query: 272 EVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW 325
EV+ Y +AD+W+ G+ L L PP + +LK S+P
Sbjct: 173 EVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK------SEPP 226
Query: 326 PLI-----SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363
L S S D ++ L P +R TA E+L HP++ +
Sbjct: 227 TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS 269
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 2e-24
Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 16/263 (6%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
R LG+G FG C ATG +ACK + K+++ R+ E QI+ + + +V+
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVS 64
Query: 165 IKGAYE--DSLCVHIVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLG 220
+ AYE D+LC +V+ L GG+L I G+ + E +A I +E H
Sbjct: 65 LAYAYETKDALC--LVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER 122
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYG 279
+++RDLKPEN LL DD ++ D GL+V G+ VG+ Y+APEV+ + Y
Sbjct: 123 IVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYT 179
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339
D W G ++Y ++ G PF ++ + V + + + + S++A+ + R++
Sbjct: 180 FSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQL 239
Query: 340 LCSQPSERL-----TAHEVLCHP 357
L P RL A EV HP
Sbjct: 240 LTKDPGFRLGCRGEGAEEVKAHP 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 2e-24
Identities = 77/252 (30%), Positives = 114/252 (45%), Gaps = 51/252 (20%)
Query: 148 REIQIMHHLAGHKNIVTIK----GAYEDSLCVHIVMELCAGGE-----LFDRIIQRGHYS 198
REI I+ L H NIVT+K G+ D +++VME E L + + Q S
Sbjct: 53 REINILLKL-QHPNIVTVKEVVVGSNLDK--IYMVMEYV---EHDLKSLMETMKQPFLQS 106
Query: 199 ERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQ 257
E K L ++ V H ++HRDLK N LL N+ LK DFGL+ + P +
Sbjct: 107 EVKC--LMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGI---LKICDFGLAREYGSPLK 161
Query: 258 IFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPF--WAETQQ--GIFD 311
+T +V + +Y APE+LL K Y D+W+ G I LL+ P F +E Q IF
Sbjct: 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFK 221
Query: 312 AV---------------LKGHIDFESDP-WPL--------ISDSAKDLIRKMLCSQPSER 347
+ F P L +SD+ DL+ ++L P++R
Sbjct: 222 LLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKR 281
Query: 348 LTAHEVLCHPWI 359
++A + L HP+
Sbjct: 282 ISAEDALKHPYF 293
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 71/253 (28%), Positives = 133/253 (52%), Gaps = 26/253 (10%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG + FA K ++K +++ R + R E ++ + ++ I T+
Sbjct: 9 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDNQWITTLH 67
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI----IVGVVEACHSLGVM 222
A++D +++VM+ GG+L + + +R ++ R +V +++ H L +
Sbjct: 68 YAFQDENNLYLVMDYYVGGDLLTLL---SKFEDRLPEDMARFYLAEMVIAIDSVHQLHYV 124
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSV-FFKPGQIFTDV-VGSPYYVAPEVLLK---- 276
HRD+KP+N L+ D + ++ DFG + + G + + V VG+P Y++PE+L
Sbjct: 125 HRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDG 181
Query: 277 --HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL----ISD 330
YGPE D W+ GV +Y +L G PF+AE+ + ++ F+ +P +S+
Sbjct: 182 KGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPAQVTDVSE 238
Query: 331 SAKDLIRKMLCSQ 343
AKDLIR+++CS+
Sbjct: 239 DAKDLIRRLICSR 251
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 3e-24
Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 17/263 (6%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG C ATG +ACK ++K++L R+ E E +I+ + + IV++
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS-RFIVSLA 59
Query: 167 GAYEDSLCVHIVMELCAGGELFDRII----QRGHYSERKAAELTRIIVGVVEACHSLGVM 222
A++ + +VM + GG+L I + + E +A T I+ +E H ++
Sbjct: 60 YAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRII 119
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-VVGSPYYVAPEVLL-KHYGP 280
+RDLKPEN LL D+D +++ D GL+V K GQ T G+P ++APE+L + Y
Sbjct: 120 YRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDF 176
Query: 281 EADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL-ISDSAKDLIRKM 339
D + GV LY +++ PF A ++ + + LK I +S +P S ++K +
Sbjct: 177 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRILNDSVTYPDKFSPASKSFCEAL 235
Query: 340 LCSQPSERL-----TAHEVLCHP 357
L P +RL + HP
Sbjct: 236 LAKDPEKRLGFRDGNCDGLRTHP 258
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 4e-24
Identities = 71/247 (28%), Positives = 123/247 (49%), Gaps = 15/247 (6%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L T +A K + K +I +DVE E +++ + +
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLH 67
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAA-ELTRIIVGVVEACHSLGVMHRD 225
++ ++ VME GG+L I Q G + E A I +G+ HS G+++RD
Sbjct: 68 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLF-FLHSKGIIYRD 126
Query: 226 LKPENFLLVNKDDDFSLKAIDFGL---SVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPE 281
LK +N +L D + +K DFG+ ++F G+ G+P Y+APE++ + YG
Sbjct: 127 LKLDNVML---DAEGHIKIADFGMCKENIF--GGKTTRTFCGTPDYIAPEIIAYQPYGKS 181
Query: 282 ADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341
D W GV+LY +L+G PPF E + +F ++++ ++ + +S A + + +L
Sbjct: 182 VDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS----LSKEAVSICKGLLT 237
Query: 342 SQPSERL 348
P++RL
Sbjct: 238 KHPAKRL 244
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 4e-24
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 29/274 (10%)
Query: 104 GRKLGQGQFGTTYLCTEIATGIEFACKSI---------SKRKLISREDVEDVRREIQIMH 154
G +G G FG+ YL ++G A K + RK R ++ + REI ++
Sbjct: 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRK---RSMLDALAREIALLK 61
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
L H+NIV G+ D+ ++I +E GG + + G + E R I+ +
Sbjct: 62 ELQ-HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLN 120
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT-------DVVGSPY 267
H+ G++HRD+K N L+ NK +K DFG+S + + T + GS +
Sbjct: 121 YLHNRGIIHRDIKGANILVDNKG---GIKISDFGISKKLEANSLSTKTNGARPSLQGSVF 177
Query: 268 YVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDFESDPW 325
++APEV+ + Y +AD+W+ G ++ +L+G PF TQ Q IF + S+
Sbjct: 178 WMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSN-- 235
Query: 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
IS A D + K ++R TA E+L HP++
Sbjct: 236 --ISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 6e-24
Identities = 70/267 (26%), Positives = 128/267 (47%), Gaps = 19/267 (7%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y R +G+G +G L G ++ K ++ R RE + +E Q++ L H
Sbjct: 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRER-KAAEQEAQLLSQLK-HP 59
Query: 161 NIVTIKGAYEDSLC-VHIVMELCAGGELFDRII-QRGHY-SERKAAELTRIIVGVVEACH 217
NIV + ++E ++IVM C GG+L+ ++ Q+G E + E I ++ H
Sbjct: 60 NIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH 119
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVLL- 275
++HRDLK +N L + +K D G++ V + + ++G+PYY++PE+
Sbjct: 120 EKHILHRDLKTQNVFLTRTN---IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSN 176
Query: 276 KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK-- 333
K Y ++DVW G +Y + + F A+ + +++G + P+ D +
Sbjct: 177 KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP------PMPKDYSPEL 230
Query: 334 -DLIRKMLCSQPSERLTAHEVLCHPWI 359
+LI ML +P +R + +L P+I
Sbjct: 231 GELIATMLSKRPEKRPSVKSILRQPYI 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 7e-24
Identities = 75/274 (27%), Positives = 119/274 (43%), Gaps = 25/274 (9%)
Query: 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED-------VEDVRREIQIMHHL 156
G +G+G +G YL + TG A K + I+ V+ +R EI+ + L
Sbjct: 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL 65
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
H NIV G + I +E GG + + G + E+ T ++ +
Sbjct: 66 D-HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYL 124
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV-----GSPYYVAP 271
HS G++HRDLK +N L+ D D K DFG+S K I+ + GS +++AP
Sbjct: 125 HSKGILHRDLKADNLLV---DADGICKISDFGISK--KSDDIYDNDQNMSMQGSVFWMAP 179
Query: 272 EVL-LKH--YGPEADVWTAGVILYILLSGVPPFWA--ETQQGIFD-AVLKGHIDFESDPW 325
EV+ Y + D+W+ G ++ + +G P W+ E +F + D
Sbjct: 180 EVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP-WSDEEAIAAMFKLGNKRSAPPIPPDVS 238
Query: 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+S A D + P R TA E+L HP+I
Sbjct: 239 MNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 1e-23
Identities = 84/270 (31%), Positives = 132/270 (48%), Gaps = 20/270 (7%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSI---SKRKLISREDVEDVRREIQIMHHLA 157
+ LG+ LG+G FG YLC + TG E A K + + S+E V + EIQ++ +L
Sbjct: 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKE-VNALECEIQLLKNLR 62
Query: 158 GHKNIVTIKGAYED--SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA 215
H IV G D + I +E GG + D++ G +E TR I+ V
Sbjct: 63 -HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSY 121
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS----VFFKPGQIFTDVVGSPYYVAP 271
HS ++HRD+K N L +D ++K DFG S G V G+PY+++P
Sbjct: 122 LHSNMIVHRDIKGANIL---RDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSP 178
Query: 272 EVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL-IS 329
EV+ + YG +ADVW+ + +L+ PP WAE + A+ K P +S
Sbjct: 179 EVISGEGYGRKADVWSVACTVVEMLTEKPP-WAEYEA--MAAIFKIATQPTKPMLPDGVS 235
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
D+ +D ++++ + R TA +L HP++
Sbjct: 236 DACRDFLKQIFVEE-KRRPTAEFLLRHPFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 19/267 (7%)
Query: 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH 159
L+T R++G G FG Y ++ T A K +S S E +D+ +E++ + L H
Sbjct: 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-H 74
Query: 160 KNIVTIKGAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSERKAAELTRIIVGVVEACH 217
N + KG Y +VME C G ++ + + + E + A + + + H
Sbjct: 75 PNTIEYKGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQEVEIAAICHGALQGLAYLH 132
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK- 276
S +HRD+K N LL + ++K DFG + P F VG+PY++APEV+L
Sbjct: 133 SHERIHRDIKAGNILLT---EPGTVKLADFGSASLVSPANSF---VGTPYWMAPEVILAM 186
Query: 277 ---HYGPEADVWTAGVILYILLSGVPP-FWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332
Y + DVW+ G+ L PP F ++ S+ W SD
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDW---SDYF 243
Query: 333 KDLIRKMLCSQPSERLTAHEVLCHPWI 359
++ + L P +R ++ E+L H ++
Sbjct: 244 RNFVDSCLQKIPQDRPSSEELLKHRFV 270
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 1e-23
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 15/251 (5%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG L G +A K + K+ +++R++ + + E ++ H +V +
Sbjct: 3 IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
+++ + ++ V++ GGELF + + + E +A I + HS+ +++RDL
Sbjct: 63 YSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDL 122
Query: 227 KPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV----GSPYYVAPEVLLKH-YGPE 281
KPEN LL D + DFGL K G +D G+P Y+APEV+ K Y
Sbjct: 123 KPENILL---DSQGHVVLTDFGLC---KEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNT 176
Query: 282 ADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341
D W G +LY +L G+PPF+ ++D +L + P S +A ++ ++L
Sbjct: 177 VDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLE 232
Query: 342 SQPSERLTAHE 352
RL A E
Sbjct: 233 KDRQRRLGAKE 243
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 2e-23
Identities = 88/314 (28%), Positives = 135/314 (42%), Gaps = 75/314 (23%)
Query: 101 YTLGRKLGQGQFGTTYLC----TEIATGIEFACKSISK---RKLISREDVEDVRREIQIM 153
Y L ++LGQG +G +C E + A K I+ +K++++ + RE++++
Sbjct: 2 YELIKELGQGAYGI--VCSARNAETSEEETVAIKKITNVFSKKILAKRAL----RELKLL 55
Query: 154 HHLAGHKNIVTI-------KGAYEDSLCVHIVME------LCAGGELFDRIIQRGHYSER 200
H GHKNI + G + + +ME + +G L D Q Y
Sbjct: 56 RHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIY--- 112
Query: 201 KAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI-- 258
+I+ G+ + HS V+HRDLKP N LLVN D + LK DFGL+ F
Sbjct: 113 ------QILCGL-KYIHSANVLHRDLKPGN-LLVNADCE--LKICDFGLARGFSENPGEN 162
Query: 259 ---FTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAE--------- 304
T+ V + +Y APE++L + Y DVW+ G IL LL P F +
Sbjct: 163 AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQI 222
Query: 305 -------------------TQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPS 345
Q I FES +P + A DL+ K+L P+
Sbjct: 223 LQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESI-FPNANPLALDLLEKLLAFDPT 281
Query: 346 ERLTAHEVLCHPWI 359
+R++ E L HP++
Sbjct: 282 KRISVEEALEHPYL 295
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 90/312 (28%), Positives = 134/312 (42%), Gaps = 66/312 (21%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSIS--------KRKLISREDVEDVR 147
++ Y +G+G +G T TG++ A K IS +R L
Sbjct: 2 DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTL---------- 51
Query: 148 REIQIMHHLAGHKNIVTIK-----GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA 202
REI+I+ H+NI+ I ++E V+IV EL +L+ ++I+ H S
Sbjct: 52 REIKILRRFK-HENIIGILDIIRPPSFESFNDVYIVQELMET-DLY-KLIKTQHLSNDHI 108
Query: 203 AELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP----GQI 258
I+ ++ HS V+HRDLKP N LL+N + D LK DFGL+ P
Sbjct: 109 QYFLYQILRGLKYIHSANVLHRDLKPSN-LLLNTNCD--LKICDFGLARIADPEHDHTGF 165
Query: 259 FTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPF--------------- 301
T+ V + +Y APE++L K Y D+W+ G IL +LS P F
Sbjct: 166 LTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGV 225
Query: 302 ----WAETQQGIFDAVLKGHIDFESDPW----------PLISDSAKDLIRKMLCSQPSER 347
E I + +I +S P+ P A DL+ KML P +R
Sbjct: 226 LGTPSQEDLNCIISLRARNYI--KSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKR 283
Query: 348 LTAHEVLCHPWI 359
+T E L HP++
Sbjct: 284 ITVEEALAHPYL 295
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 99.1 bits (248), Expect = 2e-23
Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 45/241 (18%)
Query: 105 RKLGQGQFGTTYLCT---EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161
+KLG+G FG Y + E A K++ + S E+ +D +E ++M L GH N
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDA--SEEERKDFLKEARVMKKL-GHPN 57
Query: 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERK------AAELTRIIVGVVEA 215
+V + G + +++V+E GG+L D + + +L + + A
Sbjct: 58 VVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQI--A 115
Query: 216 C-----HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV- 269
S +HRDL N L+ +D +K DFGLS DV YY
Sbjct: 116 KGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSR---------DVYDDDYYRK 163
Query: 270 -----------APEVLLKH-YGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKG 316
APE L + ++DVW+ GV+L+ + + G P+ + + + + + KG
Sbjct: 164 KTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG 223
Query: 317 H 317
+
Sbjct: 224 Y 224
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 73/271 (26%), Positives = 140/271 (51%), Gaps = 27/271 (9%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
D + + + +G+G FG + T +A K ++K +++ R + R E ++ +
Sbjct: 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVN-GD 59
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG----VVE 214
+ I T+ A++D +++VM+ GG+L + + +R ++ R + +
Sbjct: 60 CQWITTLHYAFQDENYLYLVMDYYVGGDLLTLL---SKFEDRLPEDMARFYIAEMVLAIH 116
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV-FFKPGQIFTDV-VGSPYYVAPE 272
+ H L +HRD+KP+N LL D + ++ DFG + + G + + V VG+P Y++PE
Sbjct: 117 SIHQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPE 173
Query: 273 VL------LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326
+L + YGPE D W+ GV +Y +L G PF+AE+ + ++ F+ +P
Sbjct: 174 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FP 230
Query: 327 L----ISDSAKDLIRKMLCSQPSERLTAHEV 353
+S+ AKDLI++++CS+ RL + +
Sbjct: 231 SHITDVSEEAKDLIQRLICSR-ERRLGQNGI 260
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 100 bits (249), Expect = 4e-23
Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 9/246 (3%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG L + G +A K + K+ ++ +++ + E ++ H +V +
Sbjct: 3 IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
+++ + ++ V++ GGELF + + + E +A + + HSL +++RDL
Sbjct: 63 YSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122
Query: 227 KPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADV 284
KPEN LL D + DFGL +P + + G+P Y+APEVL K Y D
Sbjct: 123 KPENILL---DSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDW 179
Query: 285 WTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQP 344
W G +LY +L G+PPF++ ++D +L + + +A DL+ +L
Sbjct: 180 WCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLLHKDQ 235
Query: 345 SERLTA 350
RL A
Sbjct: 236 RRRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 98.0 bits (244), Expect = 5e-23
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 11/259 (4%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
R +G+G FG +LC A K I ++ ++++ + E Q++ L+ H NI+
Sbjct: 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLS-HPNIIE 63
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLGVM 222
+ + + IVME GG L + I +R + E I+ + H+ ++
Sbjct: 64 YYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLIL 123
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPE 281
HRDLK +N LL +K +K DFG+S VVG+P Y++PE+ K Y +
Sbjct: 124 HRDLKTQNILL-DKHKMV-VKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQK 181
Query: 282 ADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341
+D+W G +LY L S F A + ++ G SD + S + LI ML
Sbjct: 182 SDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRY---SPDLRQLILSMLN 238
Query: 342 SQPSERLTAHEVLCHPWIC 360
PS+R +++ P IC
Sbjct: 239 LDPSKRPQLSQIMAQP-IC 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 98.4 bits (245), Expect = 6e-23
Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 29/277 (10%)
Query: 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSI---SKRKLISREDVEDVRREIQIMHHL 156
+T G LG+G +GT Y C G A K + + L + ++ E ++ E+ ++ L
Sbjct: 1 EWTKGEVLGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL 59
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
H NIV G D + I ME GG + + + G E + T+ I+ V
Sbjct: 60 K-HVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYL 118
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG-------LSVFFKPGQIFTDVVGSPYYV 269
H+ V+HRD+K N +L+ +K IDFG + + + + G+PY++
Sbjct: 119 HNNCVVHRDIKGNNVMLMPNG---IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWM 175
Query: 270 APEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQ--GIFDAVLKGHIDFESDPWP 326
APEV+ + YG ++D+W+ G ++ + +G PP A + +F +I P
Sbjct: 176 APEVINESGYGRKSDIWSIGCTVFEMATGKPP-LASMDRLAAMF------YIGAHRGLMP 228
Query: 327 LISDS----AKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ DS A D + L ER +A ++L H ++
Sbjct: 229 RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 98.0 bits (244), Expect = 8e-23
Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 25/264 (9%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEF-ACKSIS-------KRKLISREDVEDVRREIQI 152
Y + LG G FG Y + G A K I+ K K + + D+ E+ I
Sbjct: 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG---GELFDRIIQRG-HYSERKAAELTRI 208
+ H NIV + ++ ++IVM+L G GE F+ + ++ ++E + + I
Sbjct: 62 IKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEER---IWNI 118
Query: 209 IVGVVEACHSLG----VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264
V +V A L ++HRDL P N +L D + DFGL+ +P T VVG
Sbjct: 119 FVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD---KVTITDFGLAKQKQPESKLTSVVG 175
Query: 265 SPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD 323
+ Y PE++ YG +ADVW G ILY + + PPF++ + +++ +E
Sbjct: 176 TILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEA--VYEPL 233
Query: 324 PWPLISDSAKDLIRKMLCSQPSER 347
P + S+ D+I L R
Sbjct: 234 PEGMYSEDVTDVITSCLTPDAEAR 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 98.3 bits (245), Expect = 9e-23
Identities = 81/288 (28%), Positives = 123/288 (42%), Gaps = 46/288 (15%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR-REIQIMHHLAGHKNIVT 164
KLG+G + T Y TG A K I L + E REI +M L H+NIV
Sbjct: 7 KLGEGTYATVYKGRNRTTGEIVALKEI---HLDAEEGTPSTAIREISLMKELK-HENIVR 62
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI------IVGVVEACHS 218
+ + +V E +L + G R A + + ++ + CH
Sbjct: 63 LHDVIHTENKLMLVFEYMDK-DLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHE 118
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVLL-- 275
V+HRDLKP+N LL+NK + LK DFGL+ F P F++ V + +Y AP+VLL
Sbjct: 119 NRVLHRDLKPQN-LLINKRGE--LKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGS 175
Query: 276 KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK-- 333
+ Y D+W+ G I+ +++G P F + + + WP IS +
Sbjct: 176 RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235
Query: 334 -----------------------DLIRKMLCSQPSERLTAHEVLCHPW 358
DL+ ++L P R++AH+ L HPW
Sbjct: 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 97.6 bits (243), Expect = 9e-23
Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 14/262 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + K+G+G FG + A +A K I K+ +R + E+ E +++ L
Sbjct: 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKL-DSS 59
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRI-IQRGH-YSERKAAEL-TRIIVGVVEACH 217
I+ ++ D ++IVME G+L + +QRG E + +I++G+ H
Sbjct: 60 YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGL-AHLH 118
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-VVGSPYYVAPEVLL- 275
S ++HRD+K N L D ++K D G++ F + +VG+PYY++PE+
Sbjct: 119 SKKILHRDIKSLNLFL---DAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCED 175
Query: 276 KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335
K Y ++DVW GV+LY +G PF A Q + +++G S + S L
Sbjct: 176 KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMY---SQQLAQL 232
Query: 336 IRKMLCSQPSERLTAHEVLCHP 357
I + L +R ++L +P
Sbjct: 233 IDQCLTKDYRQRPDTFQLLRNP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 98.9 bits (246), Expect = 1e-22
Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 14/281 (4%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
+ LG+G FG +L T FA K++ K ++ +DVE E +++ H +
Sbjct: 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+ ++ + VME GG+L I + +A I+ ++ HS G+++R
Sbjct: 61 LYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYR 120
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-VGSPYYVAPEVLL-KHYGPEA 282
DLK +N LL D D +K DFG+ G T G+P Y+APE+LL + Y
Sbjct: 121 DLKLDNILL---DTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSV 177
Query: 283 DVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP-LISDSAKDLIRKMLC 341
D W+ GV+LY +L G PF ++ +F + I ++ +P ++ AKD++ K+
Sbjct: 178 DWWSFGVLLYEMLIGQSPFHGHDEEELFQS-----IRMDNPCYPRWLTREAKDILVKLFV 232
Query: 342 SQPSERLTAH-EVLCHPWICEN--GVAPDRSLDPAVLSRLK 379
+P RL ++ HP+ E +R ++P ++K
Sbjct: 233 REPERRLGVKGDIRQHPFFREIDWSALEEREIEPPFKPKVK 273
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 96.8 bits (242), Expect = 1e-22
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 38/237 (16%)
Query: 102 TLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
LG+KLG+G FG Y T T + A K++ ++ S E+ E+ E IM L
Sbjct: 2 ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTL--KEGASEEEREEFLEEASIMKKL- 58
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC- 216
H NIV + G ++IV E GG+L D + + G + +L ++ + + +
Sbjct: 59 SHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGE--KLTLKDLLQMALQIAKGME 116
Query: 217 --HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV----- 269
S +HRDL N L+ ++ +K DFGLS D+ YY
Sbjct: 117 YLESKNFVHRDLAARNCLV---TENLVVKISDFGLS---------RDIYEDDYYRKRGGG 164
Query: 270 -------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
APE L + ++DVW+ GV+L+ + + G P+ + + + + + G+
Sbjct: 165 KLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGY 221
|
Length = 258 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 97.3 bits (243), Expect = 2e-22
Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 41/286 (14%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
++ L +G+G +G Y TG A K + + ++ E+++ E I+ +
Sbjct: 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSN 61
Query: 159 HKNIVTIKGAY--EDSLCVH----IVMELCAGG---ELFDRIIQRGH-YSERKAAELTRI 208
H NI T GA+ ++ +VMELC GG +L + ++G E A + R
Sbjct: 62 HPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRE 121
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-VVGSPY 267
+ + H V+HRD+K +N LL + +K +DFG+S + +G+PY
Sbjct: 122 TLRGLAYLHENKVIHRDIKGQNILLT---KNAEVKLVDFGVSAQLDSTLGRRNTFIGTPY 178
Query: 268 YVAPEVLLKHYGPEA------DVWTAGVILYILLSGVPPFWAETQ--QGIFDAVLKGHID 319
++APEV+ P+A DVW+ G+ L G PP + + +F
Sbjct: 179 WMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPL-CDMHPMRALFKIP------ 231
Query: 320 FESDPWPLISDSAK------DLIRKMLCSQPSERLTAHEVLCHPWI 359
+P P + D I + L +R E+L HP+I
Sbjct: 232 --RNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 96.9 bits (241), Expect = 2e-22
Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 13/267 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED---VEDVRREIQIMHHLA 157
+ G++LG G F + Y ++ TG A K ++ + S E VE +R+EI++M L
Sbjct: 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL- 60
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH 217
H +I+ + GA + ++ +E AGG + + + G + E T ++ + H
Sbjct: 61 NHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH 120
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV-----FFKPGQIFTDVVGSPYYVAPE 272
++HRD+K N L+ + L+ DFG + G+ ++G+ ++APE
Sbjct: 121 ENQIIHRDVKGANLLIDSTGQR--LRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPE 178
Query: 273 VLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP-LISD 330
VL + YG DVW+ G ++ + + PP+ AE + K + P +S
Sbjct: 179 VLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSP 238
Query: 331 SAKDLIRKMLCSQPSERLTAHEVLCHP 357
+D+ + L QP +R + E+L HP
Sbjct: 239 GLRDVTLRCLELQPEDRPPSRELLKHP 265
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 97.6 bits (243), Expect = 3e-22
Identities = 84/295 (28%), Positives = 134/295 (45%), Gaps = 51/295 (17%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISK---RKLISREDVEDVRREIQIMHHLA 157
Y + +G G FG + TG A K I K ++++ RE++++ HL
Sbjct: 12 YVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKR----TYRELKLLKHLR 67
Query: 158 GHKNIVTIKGAY----EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
H+NI+++ + ED ++ V EL G R++ ++ I+ +
Sbjct: 68 -HENIISLSDIFISPLED---IYFVTELL--GTDLHRLLTSRPLEKQFIQYFLYQILRGL 121
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEV 273
+ HS GV+HRDLKP N +L+N++ D LK DFGL+ P T V + YY APE+
Sbjct: 122 KYVHSAGVVHRDLKPSN-ILINENCD--LKICDFGLARIQDPQ--MTGYVSTRYYRAPEI 176
Query: 274 LL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL----------------K 315
+L + Y E D+W+AG I +L G P F + F + +
Sbjct: 177 MLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSE 236
Query: 316 GHIDF-----ESDPWPL------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ F + +P P SA DL+ KML P +R++A E L HP++
Sbjct: 237 NTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYL 291
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 3e-22
Identities = 81/279 (29%), Positives = 129/279 (46%), Gaps = 40/279 (14%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMHHLAGHK 160
+LG+G G+ C TG+ FA K I+ + D++ RE++I
Sbjct: 7 SRLGEGAGGSVTKCRLKNTGMIFA------LKTITTDPNPDLQKQILRELEINKSCK-SP 59
Query: 161 NIVTIKGAY--EDSLCVHIVMELCAGGELFDRIIQR-----GHYSERKAAELTRIIVGVV 213
IV GA+ E S + I ME C GG L D I ++ G E+ ++ ++ +
Sbjct: 60 YIVKYYGAFLDESSSSIGIAMEYCEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESVLKGL 118
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV----VGSPYYV 269
HS ++HRD+KP N LL K +K DFG+S G++ + G+ +Y+
Sbjct: 119 SYLHSRKIIHRDIKPSNILLTRKG---QVKLCDFGVS-----GELVNSLAGTFTGTSFYM 170
Query: 270 APEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI------DFES 322
APE + K Y +DVW+ G+ L + PF E + + L +I + +
Sbjct: 171 APERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKD 230
Query: 323 DPWPLI--SDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+P I S+ KD I++ L P+ R T ++L HPWI
Sbjct: 231 EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 97.4 bits (242), Expect = 3e-22
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L T +A K + K +I +DVE E +++ + +
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLH 67
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAA-ELTRIIVGVVEACHSLGVMHRD 225
++ ++ VME GG+L I Q G + E +A I VG+ H G+++RD
Sbjct: 68 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLF-FLHRRGIIYRD 126
Query: 226 LKPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVL-LKHYGPEAD 283
LK +N +L D + +K DFG+ G G+P Y+APE++ + YG D
Sbjct: 127 LKLDNVML---DSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVD 183
Query: 284 VWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQ 343
W GV+LY +L+G PPF E + +F ++++ ++ + +S A + + ++
Sbjct: 184 WWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS----LSKEAVSICKGLMTKH 239
Query: 344 PSERL 348
PS+RL
Sbjct: 240 PSKRL 244
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 95.8 bits (238), Expect = 5e-22
Identities = 75/254 (29%), Positives = 125/254 (49%), Gaps = 16/254 (6%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG TG +ACK + K++L + + E +I+ + IV +
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS-PFIVNLA 59
Query: 167 GAYEDSLCVHIVMELCAGGELFDRII---QRGHYSERKAAELTRIIVGVVEACHSLGVMH 223
A+E + +VM L GG+L I +RG ER +I G++ HS+ +++
Sbjct: 60 YAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILH-LHSMDIVY 118
Query: 224 RDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEA 282
RD+KPEN LL DD + + D GL+V K G+ T G+ Y+APE+L + Y
Sbjct: 119 RDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPV 175
Query: 283 DVWTAGVILYILLSGVPPF--WAE--TQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338
D + G +Y +++G PF E ++ + L+ + FE + ++ +KD+ R
Sbjct: 176 DWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNF---TEESKDICRL 232
Query: 339 MLCSQPSERLTAHE 352
L +P +RL + E
Sbjct: 233 FLAKKPEDRLGSRE 246
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 6e-22
Identities = 89/302 (29%), Positives = 130/302 (43%), Gaps = 51/302 (16%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMH 154
D Y K+G+G +G Y + TG K ++ +K D E + REI ++
Sbjct: 1 DAYEKLEKIGEGTYGKVYKARDKNTG-----KLVALKKTRLEMDEEGIPPTALREISLLQ 55
Query: 155 HLAGHKNIV---TIKGAYEDS--LCVHIVMELCAGGELFDRIIQRGHYSERKAAELT--- 206
L+ IV ++ E + +++V E +L + G R T
Sbjct: 56 MLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKS 114
Query: 207 ---RIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDV 262
+++ GV CH GVMHRDLKP+N LLV+K LK D GL F P + +T
Sbjct: 115 FMYQLLKGVAH-CHKHGVMHRDLKPQN-LLVDKQKGL-LKIADLGLGRAFSIPVKSYTHE 171
Query: 263 VGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFW--AETQQ--GIFD----- 311
+ + +Y APEVLL HY D+W+ G I + P F +E QQ IF
Sbjct: 172 IVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTP 231
Query: 312 ------AVLKGHIDFESDPW---------PLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356
V K E W P +S DL++KML P++R++A L H
Sbjct: 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291
Query: 357 PW 358
P+
Sbjct: 292 PY 293
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 96.3 bits (239), Expect = 7e-22
Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 15/270 (5%)
Query: 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
++ L+T R++G G FG Y ++ T A K +S S E +D+ +E++ +
Sbjct: 21 EDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQ 80
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
+ H N + KG Y +VME C G + + E + A +T + +
Sbjct: 81 RIK-HPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLA 139
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL 274
HS ++HRD+K N LL +K DFG + P F VG+PY++APEV+
Sbjct: 140 YLHSHNMIHRDIKAGNILLTEPG---QVKLADFGSASIASPANSF---VGTPYWMAPEVI 193
Query: 275 LK----HYGPEADVWTAGVILYILLSGVPP-FWAETQQGIFDAVLKGHIDFESDPWPLIS 329
L Y + DVW+ G+ L PP F ++ +S+ W S
Sbjct: 194 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEW---S 250
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
D ++ + L P +R T+ E+L H ++
Sbjct: 251 DYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 94.8 bits (236), Expect = 1e-21
Identities = 68/264 (25%), Positives = 129/264 (48%), Gaps = 14/264 (5%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
+ + +K+G+GQF Y + G A K + +++ + +D +EI ++ L
Sbjct: 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-D 60
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELT--RIIVGV---V 213
H N++ ++ ++ ++IV+EL G+L R+I+ +R E T + V + +
Sbjct: 61 HPNVIKYLASFIENNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTIWKYFVQLCSAL 119
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT-DVVGSPYYVAPE 272
E HS +MHRD+KP N + +K D GL FF +VG+PYY++PE
Sbjct: 120 EHMHSKRIMHRDIKPANVFITA---TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 176
Query: 273 VLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK-GHIDFESDPWPLISD 330
+ ++ Y ++D+W+ G +LY + + PF+ + + ++ K D+ P S+
Sbjct: 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD-KMNLYSLCKKIEKCDYPPLPADHYSE 235
Query: 331 SAKDLIRKMLCSQPSERLTAHEVL 354
+DL+ + + P +R VL
Sbjct: 236 ELRDLVSRCINPDPEKRPDISYVL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 2e-21
Identities = 87/280 (31%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
N ++ + L +++G G +G Y + TG A K I KL ED V++EI IM
Sbjct: 6 NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVI---KLEPGEDFAVVQQEI-IMMK 61
Query: 156 LAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA 215
H NIV G+Y + I ME C GG L D G SE + A ++R + +
Sbjct: 62 DCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYY 121
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV------VGSPYYV 269
HS G MHRD+K N LL D+ +K DFG+S QI + +G+PY++
Sbjct: 122 LHSKGKMHRDIKGANILLT---DNGHVKLADFGVS-----AQITATIAKRKSFIGTPYWM 173
Query: 270 APEVLLKH----YGPEADVWTAGVILYILLSGVPP-FWAETQQGIFDAVLKGHIDFESDP 324
APEV Y D+W G+ L PP F + +F L +F+
Sbjct: 174 APEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMTKSNFQP-- 228
Query: 325 WPLISDSAK------DLIRKMLCSQPSERLTAHEVLCHPW 358
P + D K ++ L P +R TA ++L HP+
Sbjct: 229 -PKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 95.1 bits (236), Expect = 2e-21
Identities = 71/246 (28%), Positives = 122/246 (49%), Gaps = 13/246 (5%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT-I 165
LG+G FG L T +A K + K +I +DVE E +++ L+G +T +
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLA-LSGKPPFLTQL 66
Query: 166 KGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAA-ELTRIIVGVVEACHSLGVMHR 224
++ ++ VME GG+L +I Q G + E A I +G+ HS G+++R
Sbjct: 67 HSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLF-FLHSKGIIYR 125
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVL-LKHYGPEA 282
DLK +N +L D + +K DFG+ G G+P Y+APE++ + YG
Sbjct: 126 DLKLDNVML---DSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSV 182
Query: 283 DVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342
D W GV+LY +L+G PF E + +F ++++ ++ + +S A + + ++
Sbjct: 183 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKGLMTK 238
Query: 343 QPSERL 348
P +RL
Sbjct: 239 HPGKRL 244
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 93.5 bits (232), Expect = 2e-21
Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 13/264 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + +K+G+G FG YL + K I K+ +E E ++E+ ++ + H
Sbjct: 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEK-EASKKEVILLAKMK-HP 59
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRI-IQRG-HYSERKA-AELTRIIVGVVEACH 217
NIVT +++++ + IVME C GG+L RI QRG +SE + + +I +G ++ H
Sbjct: 60 NIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLG-LKHIH 118
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVLL- 275
++HRD+K +N L + K DFG++ ++ VG+PYY++PE+
Sbjct: 119 DRKILHRDIKSQNIFL--SKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQN 176
Query: 276 KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335
+ Y + D+W+ G +LY L + PF + + +G+ S P S + L
Sbjct: 177 RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPIS---PNFSRDLRSL 233
Query: 336 IRKMLCSQPSERLTAHEVLCHPWI 359
I ++ P +R + +L P++
Sbjct: 234 ISQLFKVSPRDRPSITSILKRPFL 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 94.9 bits (236), Expect = 2e-21
Identities = 75/253 (29%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 107 LGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIV 163
LGQG FG +L +I G +A K + K L R+ V + E I+ + H IV
Sbjct: 4 LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVR-TKMERDILAEV-NHPFIV 61
Query: 164 TIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSL 219
+ A++ ++++++ GG+LF R+ + ++E AEL ++ HSL
Sbjct: 62 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL----ALDHLHSL 117
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT-DVVGSPYYVAPEVL-LKH 277
G+++RDLKPEN LL D++ +K DFGLS + G+ Y+APEV+ +
Sbjct: 118 GIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG 174
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
+ AD W+ GV+++ +L+G PF + ++ +LK + +S A+ L+R
Sbjct: 175 HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLR 230
Query: 338 KMLCSQPSERLTA 350
+ P+ RL A
Sbjct: 231 ALFKRNPANRLGA 243
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 93.9 bits (233), Expect = 3e-21
Identities = 88/310 (28%), Positives = 141/310 (45%), Gaps = 46/310 (14%)
Query: 78 MRRGID-NQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRK 136
+RR +D N+ + ++G +LG G FG Y TG A K I +
Sbjct: 4 VRRDLDPNEVWEIIG--------------ELGDGAFGKVYKAKNKETGALAAAKVIETK- 48
Query: 137 LISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRI---IQ 193
S E++ED EI+I+ H IV + GA+ + I++E C GG + D I +
Sbjct: 49 --SEEELEDYMVEIEILAT-CNHPYIVKLLGAFYWDGKLWIMIEFCPGGAV-DAIMLELD 104
Query: 194 RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV-F 252
RG +E + + R ++ ++ HS+ ++HRDLK N LL D +K DFG+S
Sbjct: 105 RG-LTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGD---IKLADFGVSAKN 160
Query: 253 FKPGQIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQ 306
K Q +G+PY++APEV++ Y +AD+W+ G+ L + PP
Sbjct: 161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 220
Query: 307 QGIFDAVLKGHIDFESDPWPLISDSA-----KDLIRKMLCSQPSERLTAHEVLCHPWICE 361
+ + K S+P L S +D ++ L P R +A ++L HP++
Sbjct: 221 MRVLLKIAK------SEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274
Query: 362 -NGVAPDRSL 370
P R L
Sbjct: 275 VTSNRPLREL 284
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 93.6 bits (233), Expect = 4e-21
Identities = 82/288 (28%), Positives = 126/288 (43%), Gaps = 45/288 (15%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMHHLAGHKN 161
K+G+G +G + C TG A K K + ED ++ REI+++ L H N
Sbjct: 8 KIGEGSYGVVFKCRNRETGQIVAIK-----KFVESEDDPVIKKIALREIRMLKQLK-HPN 61
Query: 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEACHSLG 220
+V + + +H+V E C + + + + E ++ + V CH
Sbjct: 62 LVNLIEVFRRKRKLHLVFEYC-DHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN 120
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEVLL--KH 277
+HRD+KPEN +L+ K +K DFG + PG +TD V + +Y APE+L+
Sbjct: 121 CIHRDVKPEN-ILITKQG--QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQ 177
Query: 278 YGPEADVWTAGVILYILLSGVP--PFWAETQQ----------------GIF--DAVLKG- 316
YGP DVW G + LL+G P P ++ Q IF + KG
Sbjct: 178 YGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGL 237
Query: 317 HIDFESDPWPL------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
I PL IS A ++ L P+ERL+ E+L HP+
Sbjct: 238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 6e-21
Identities = 88/304 (28%), Positives = 134/304 (44%), Gaps = 73/304 (24%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G +G T + A K I+ +R D + REI+++ HL H+N++ IK
Sbjct: 13 IGRGAYGIVCSAKNSETNEKVAIKKIAN-AFDNRIDAKRTLREIKLLRHLD-HENVIAIK 70
Query: 167 G--------AYEDSLCVHIVMELCAGGELFD----RIIQRGHYSERKAAELT-------- 206
A+ D V+IV EL D +II R + L+
Sbjct: 71 DIMPPPHREAFND---VYIVYEL------MDTDLHQII-------RSSQTLSDDHCQYFL 114
Query: 207 -RIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVG 264
+++ G+ + HS V+HRDLKP N LL+N + D LK DFGL+ + G T+ V
Sbjct: 115 YQLLRGL-KYIHSANVLHRDLKPSN-LLLNANCD--LKICDFGLARTTSEKGDFMTEYVV 170
Query: 265 SPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAE---TQQGIFDAVL----K 315
+ +Y APE+LL Y DVW+ G I LL P F + Q + +L +
Sbjct: 171 TRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSE 230
Query: 316 GHIDFESDP--------------------WPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355
+ F + +P + A DL+ KML PS+R+T E L
Sbjct: 231 EDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALA 290
Query: 356 HPWI 359
HP++
Sbjct: 291 HPYL 294
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 93.2 bits (231), Expect = 7e-21
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 15/270 (5%)
Query: 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
D+ +++ ++G G FG Y T T A K +S + E +D+ +E++ +
Sbjct: 17 DDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQ 76
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
L H N + KG Y +VME C G + + E + A +T + +
Sbjct: 77 QLK-HPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLA 135
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL 274
HS ++HRD+K N LL +K DFG + P F VG+PY++APEV+
Sbjct: 136 YLHSHNMIHRDIKAGNILLTEPG---QVKLADFGSASKSSPANSF---VGTPYWMAPEVI 189
Query: 275 LK----HYGPEADVWTAGVILYILLSGVPP-FWAETQQGIFDAVLKGHIDFESDPWPLIS 329
L Y + DVW+ G+ L PP F ++ +S+ W +
Sbjct: 190 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEW---T 246
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
DS + + L P ER + E+L H ++
Sbjct: 247 DSFRGFVDYCLQKIPQERPASAELLRHDFV 276
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 93.3 bits (232), Expect = 7e-21
Identities = 75/246 (30%), Positives = 117/246 (47%), Gaps = 13/246 (5%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L T FA K++ K ++ +DVE E +++ H + +
Sbjct: 3 LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLF 62
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
++ + VME GG+L I G + E +A I+ ++ H G+++RDL
Sbjct: 63 CTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDL 122
Query: 227 KPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-VGSPYYVAPEVLL-KHYGPEADV 284
K +N LL D D +K DFG+ G+ G+P Y+APE+L + Y D
Sbjct: 123 KLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDW 179
Query: 285 WTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW--PLISDSAKDLIRKMLCS 342
W+ GV+LY +L G PF E + +FD++L P IS AKD + K+
Sbjct: 180 WSFGVLLYEMLIGQSPFHGEDEDELFDSILN------DRPHFPRWISKEAKDCLSKLFER 233
Query: 343 QPSERL 348
P++RL
Sbjct: 234 DPTKRL 239
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 93.1 bits (231), Expect = 7e-21
Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 15/247 (6%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L G FA K++ K ++ +DVE E +++ + + +
Sbjct: 3 LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLY 62
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
++ + VME GG+L I +G + +A IV ++ HS G+++RDL
Sbjct: 63 CTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDL 122
Query: 227 KPENFLLVNKDDDFSLKAIDFGL---SVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEA 282
K +N +L D D +K DFG+ +VF + G+P Y+APE+L Y
Sbjct: 123 KLDNVML---DRDGHIKIADFGMCKENVFGDNRA--STFCGTPDYIAPEILQGLKYTFSV 177
Query: 283 DVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP-WPLISDSAKDLIRKMLC 341
D W+ GV+LY +L G PF + + +F+++ +D P W I+ +KD++ K+
Sbjct: 178 DWWSFGVLLYEMLIGQSPFHGDDEDELFESI---RVDTPHYPRW--ITKESKDILEKLFE 232
Query: 342 SQPSERL 348
P+ RL
Sbjct: 233 RDPTRRL 239
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 92.8 bits (230), Expect = 8e-21
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 15/271 (5%)
Query: 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
D+ L++ R++G G FG Y ++ A K +S S E +D+ +E++ +
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
L H N + +G Y +VME C G + + E + A +T + +
Sbjct: 71 KLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL 274
HS ++HRD+K N LL +K DFG + P F VG+PY++APEV+
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEPG---LVKLGDFGSASIMAPANXF---VGTPYWMAPEVI 183
Query: 275 LK----HYGPEADVWTAGVILYILLSGVPP-FWAETQQGIFDAVLKGHIDFESDPWPLIS 329
L Y + DVW+ G+ L PP F ++ +S W S
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---S 240
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360
+ ++ + L P +R T+ +L H ++
Sbjct: 241 EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 271
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 1e-20
Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 46/301 (15%)
Query: 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL 156
+ D Y +G G +G + TG + A K +S R S + RE++++ H+
Sbjct: 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLS-RPFQSAIHAKRTYRELRLLKHM 71
Query: 157 AGHKNIVTIKGAY------EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIV 210
H+N++ + + ED V++V L G +L + I++ S+ L I+
Sbjct: 72 D-HENVIGLLDVFTPASSLEDFQDVYLVTHL-MGADL-NNIVKCQKLSDDHIQFLVYQIL 128
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVA 270
++ HS G++HRDLKP N + VN+D + LK +DFGL+ T V + +Y A
Sbjct: 129 RGLKYIHSAGIIHRDLKPSN-IAVNEDCE--LKILDFGLAR--HTDDEMTGYVATRWYRA 183
Query: 271 PEVLLK--HYGPEADVWTAGVILYILLSGVPPF-------------------WAETQQGI 309
PE++L HY D+W+ G I+ LL+G F E Q I
Sbjct: 184 PEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI 243
Query: 310 FDAVLKGHI---------DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360
+ +I DF + + + A DL+ KML P +R+TA E L HP++
Sbjct: 244 SSESARNYIQSLPQMPKKDF-KEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302
Query: 361 E 361
E
Sbjct: 303 E 303
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 92.5 bits (230), Expect = 2e-20
Identities = 80/300 (26%), Positives = 125/300 (41%), Gaps = 52/300 (17%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
R LG G G + + A K I S V+ REI+I+ L H NIV
Sbjct: 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQS---VKHALREIKIIRRLD-HDNIVK 66
Query: 165 I-----KGAYEDSLCVHIVMEL---CAGGELFD----RIIQRGHYSERKAAELTRIIVGV 212
+ + + V + EL E + ++++G SE A ++
Sbjct: 67 VYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRG 126
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-----GQIFTDVVGSPY 267
++ HS V+HRDLKP N + +N +D LK DFGL+ P G + +V + +
Sbjct: 127 LKYIHSANVLHRDLKPAN-VFINT-EDLVLKIGDFGLARIVDPHYSHKGYLSEGLV-TKW 183
Query: 268 YVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWA----ETQQGIFDAV-------- 313
Y +P +LL +Y D+W AG I +L+G P F E Q I ++V
Sbjct: 184 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDR 243
Query: 314 ----------LKGHIDFESDPW----PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
++ P P ++ A D + ++L P +RLTA E L HP++
Sbjct: 244 NELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM 303
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 2e-20
Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 16/187 (8%)
Query: 177 IVMELCAGGELFDRIIQRGH----YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFL 232
++ME +GG+L +I QR + E + L IV ++ HS +MHRDLK N
Sbjct: 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIF 201
Query: 233 LVNKDDDFSLKAIDFGLSVFFKPG---QIFTDVVGSPYYVAPEVL-LKHYGPEADVWTAG 288
L+ +K DFG S + + + G+PYY+APE+ K Y +AD+W+ G
Sbjct: 202 LMPTG---IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLG 258
Query: 289 VILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL-ISDSAKDLIRKMLCSQPSER 347
VILY LL+ PF +Q+ I VL G + DP+P +S K L+ +L P+ R
Sbjct: 259 VILYELLTLHRPFKGPSQREIMQQVLYG----KYDPFPCPVSSGMKALLDPLLSKNPALR 314
Query: 348 LTAHEVL 354
T ++L
Sbjct: 315 PTTQQLL 321
|
Length = 478 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 91.3 bits (226), Expect = 2e-20
Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 26/274 (9%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI----SREDVEDVRREIQIMH 154
+L+T K+G+G FG E+ GI+ + + K+I + +++ED+++EI ++
Sbjct: 4 ELFTKLEKIGKGSFG------EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 57
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
+ G+Y + I+ME GG D +++ G E + A + R I+ ++
Sbjct: 58 Q-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLD 115
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-VGSPYYVAPEV 273
HS +HRD+K N LL + +K DFG++ QI + VG+P+++APEV
Sbjct: 116 YLHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 172
Query: 274 LLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL---IS 329
+ + Y +AD+W+ G+ L G PP + + K ++P L S
Sbjct: 173 IKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK------NNPPTLEGNYS 226
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363
K+ + L +PS R TA E+L H +I
Sbjct: 227 KPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 95.6 bits (237), Expect = 2e-20
Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 34/232 (14%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + +K+G G+FG +L T F K+IS R L RE + V E+ +M L HK
Sbjct: 15 YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLV-IEVNVMRELK-HK 72
Query: 161 NIVTIKGAY--EDSLCVHIVMELCAGGELFDRIIQR-----GHYSERKAAELTRIIVGVV 213
NIV + + + ++I+ME C G+L R IQ+ G E ++TR ++ +
Sbjct: 73 NIVRYIDRFLNKANQKLYILMEFCDAGDL-SRNIQKCYKMFGKIEEHAIVDITRQLLHAL 131
Query: 214 EACHSLG-------VMHRDLKPENFLL----------VNKDDDFSLKAI----DFGLSVF 252
CH+L V+HRDLKP+N L + ++ + + I DFGLS
Sbjct: 132 AYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKN 191
Query: 253 FKPGQIFTDVVGSPYYVAPEVLL---KHYGPEADVWTAGVILYILLSGVPPF 301
+ VG+PYY +PE+LL K Y ++D+W G I+Y L SG PF
Sbjct: 192 IGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF 243
|
Length = 1021 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 90.9 bits (225), Expect = 3e-20
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 26/273 (9%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED----VEDVRREIQIMH 154
+L+T ++G+G FG E+ GI+ + + K+I E+ +ED+++EI ++
Sbjct: 4 ELFTKLERIGKGSFG------EVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLS 57
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
+ G+Y + I+ME GG D +++ G + E + A + + I+ ++
Sbjct: 58 Q-CDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLD 115
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-VGSPYYVAPEV 273
HS +HRD+K N LL + D +K DFG++ QI + VG+P+++APEV
Sbjct: 116 YLHSEKKIHRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 172
Query: 274 LLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD-- 330
+ + Y +AD+W+ G+ L G PP + + I +++P L +
Sbjct: 173 IQQSAYDSKADIWSLGITAIELAKGEPP-----NSDMHPMRVLFLIP-KNNPPTLTGEFS 226
Query: 331 -SAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362
K+ I L PS R TA E+L H +I +N
Sbjct: 227 KPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 3e-20
Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 66/298 (22%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED------VRREIQIMHHLAGH 159
K+G+G +G Y + TG A K I R + ED REI ++ L H
Sbjct: 6 KIGEGTYGVVYKARDKLTGEIVALKKI-------RLETEDEGVPSTAIREISLLKELN-H 57
Query: 160 KNIVTIKGAYEDSLCVHIV-----------MELCAGGELFDRIIQRGHYSERKAAELTRI 208
NIV + +++V M+ L +I+ Y ++
Sbjct: 58 PNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLY---------QL 108
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPY 267
+ G+ CHS V+HRDLKP+N LL++++ +LK DFGL+ F P + +T V + +
Sbjct: 109 LQGIA-YCHSHRVLHRDLKPQN-LLIDREG--ALKLADFGLARAFGVPVRTYTHEVVTLW 164
Query: 268 YVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFW--AETQQ--GIF-------DAVL 314
Y APE+LL + Y D+W+ G I +++ P F +E Q IF + V
Sbjct: 165 YRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVW 224
Query: 315 KGHI---DFES-----------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
G D++ P + + DL+ KML P++R++A L HP+
Sbjct: 225 PGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 90.3 bits (224), Expect = 4e-20
Identities = 85/295 (28%), Positives = 134/295 (45%), Gaps = 37/295 (12%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTI 165
+LG+G +G+ Y TG+ A K I R + + E+ I+H A IV
Sbjct: 8 ELGKGNYGSVYKVLHRPTGVTMAMKEI--RLELDESKFNQIIMELDILHK-AVSPYIVDF 64
Query: 166 KGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTR-----IIVGVVEACHSLG 220
GA+ V++ ME G L D++ G +E ++ R ++ G+
Sbjct: 65 YGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN 123
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV----VGSPYYVAPEVLLK 276
++HRD+KP N +LVN + +K DFG+S G + + +G Y+APE +K
Sbjct: 124 IIHRDVKPTN-VLVNGNG--QVKLCDFGVS-----GNLVASLAKTNIGCQSYMAPE-RIK 174
Query: 277 HYGP--------EADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL- 327
GP ++DVW+ G+ + + G P+ ET IF A L +D DP L
Sbjct: 175 SGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF-AQLSAIVD--GDPPTLP 231
Query: 328 --ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQ 380
SD A+D + K L P+ R T ++L HPW+ + D + V LK+
Sbjct: 232 SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK-NADVDMAEWVTGALKR 285
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 90.1 bits (223), Expect = 5e-20
Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 24/287 (8%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
N + + + +LG G FG Y TG+ A K I + S E++ED EI I+
Sbjct: 2 NPEEFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILAS 58
Query: 156 LAGHKNIVTIKGA--YEDSLCVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGV 212
H NIV + A YE++L I++E CAGG + +++ +E + + + +
Sbjct: 59 -CDHPNIVKLLDAFYYENNLW--ILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEA 115
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV-FFKPGQIFTDVVGSPYYVAP 271
+ H ++HRDLK N L D +K DFG+S + Q +G+PY++AP
Sbjct: 116 LNYLHENKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAP 172
Query: 272 EVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP- 324
EV++ + Y +ADVW+ G+ L + PP + + K + P
Sbjct: 173 EVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPS 232
Query: 325 -WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSL 370
W S KD ++K L R T ++L HP++ N P R L
Sbjct: 233 RW---SSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSNKPIREL 276
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 89.6 bits (222), Expect = 5e-20
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 26/272 (9%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIE---FACKSISKRKLISREDVEDVRREIQIMHHLA 157
Y L ++LG+G FGT YL + E K I +L E V+ +E Q++ L
Sbjct: 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQ-ANQEAQLLSKLD 60
Query: 158 GHKNIVTIKGAY--EDSLCVHIVMELCAGGELFDRIIQRGH----YSERKAAE-LTRIIV 210
H IV ++ D+ C I+ E C G +L ++ + H SE + E ++++
Sbjct: 61 -HPAIVKFHASFLERDAFC--IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLL 117
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-QIFTDVVGSPYYV 269
G V H ++HRDLK +N L N LK DFG+S + T G+PYY+
Sbjct: 118 G-VHYMHQRRILHRDLKAKNIFLKNN----LLKIGDFGVSRLLMGSCDLATTFTGTPYYM 172
Query: 270 APEVLLKH--YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327
+PE LKH Y ++D+W+ G ILY + F + + +++G + +
Sbjct: 173 SPEA-LKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYS- 230
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+++ ML PS R +A E+L +P+I
Sbjct: 231 --RQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 90.3 bits (224), Expect = 6e-20
Identities = 88/314 (28%), Positives = 138/314 (43%), Gaps = 67/314 (21%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMH 154
D Y K+G+G +G Y + T A K I + +ED E V REI ++
Sbjct: 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIR----LEQED-EGVPSTAIREISLLK 56
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIV-----------MELCAGGELFDRIIQRGHYSERKAA 203
+ H NIV ++ +++V M+ R+I+
Sbjct: 57 EMQ-HGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIK---------T 106
Query: 204 ELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDV 262
L +I+ G+ CHS V+HRDLKP+N L+ + + +LK DFGL+ F P + FT
Sbjct: 107 YLYQILRGIA-YCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHE 163
Query: 263 VGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK----- 315
V + +Y APE+LL +HY D+W+ G I +++ P F +++ D + K
Sbjct: 164 VVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE---IDELFKIFRIL 220
Query: 316 GHIDFESDP--------------W---------PLISDSAKDLIRKMLCSQPSERLTAHE 352
G + E+ P W P + + DL+ KML PS+R+TA
Sbjct: 221 GTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARA 280
Query: 353 VLCHPWICENGVAP 366
L H + + G AP
Sbjct: 281 ALEHEYFKDLGDAP 294
|
Length = 294 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 89.3 bits (221), Expect = 6e-20
Identities = 66/254 (25%), Positives = 121/254 (47%), Gaps = 12/254 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + +K+G+GQF Y T + A K + +++ + +D +EI ++ L H
Sbjct: 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHP 62
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRII----QRGHYSERKAAELTRIIVGVVEAC 216
N++ ++ + ++IV+EL G+L I Q+ ER + + VE
Sbjct: 63 NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM 122
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT-DVVGSPYYVAPEVLL 275
HS VMHRD+KP N + +K D GL FF +VG+PYY++PE +
Sbjct: 123 HSRRVMHRDIKPANVFITATGV---VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 179
Query: 276 KH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK-GHIDFESDPWPLISDSAK 333
++ Y ++D+W+ G +LY + + PF+ + + +F K D+ P S+ +
Sbjct: 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGD-KMNLFSLCQKIEQCDYPPLPTEHYSEKLR 238
Query: 334 DLIRKMLCSQPSER 347
+L+ + P +R
Sbjct: 239 ELVSMCIYPDPDQR 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 88.9 bits (220), Expect = 9e-20
Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 18/253 (7%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + +K+G+GQF Y T + G+ A K + L+ + D +EI ++ L H
Sbjct: 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHP 62
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRII-----QRGHYSERKAAELTRIIVGVVEA 215
N++ ++ + ++IV+EL G+L R+I Q+ E+ + + +E
Sbjct: 63 NVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPEKTVWKYFVQLCSALEH 121
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT-DVVGSPYYVAPEVL 274
HS VMHRD+KP N + +K D GL FF +VG+PYY++PE +
Sbjct: 122 MHSRRVMHRDIKPANVFITATG---VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 178
Query: 275 LKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333
++ Y ++D+W+ G +LY + + PF+ + + ++ K + D PL SD
Sbjct: 179 HENGYNFKSDIWSLGCLLYEMAALQSPFYGD-KMNLYSLCKKIE---QCDYPPLPSDHYS 234
Query: 334 DLIRKM--LCSQP 344
+ +R++ +C P
Sbjct: 235 EELRQLVNMCINP 247
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 89.0 bits (220), Expect = 1e-19
Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 26/270 (9%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED----VEDVRREIQIMH 154
+L+T ++G+G FG E+ GI+ K + K+I E+ +ED+++EI ++
Sbjct: 4 ELFTKLERIGKGSFG------EVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLS 57
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
I G+Y + I+ME GG D +++ G E A + R I+ ++
Sbjct: 58 Q-CDSPYITRYYGSYLKGTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLD 115
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-VGSPYYVAPEV 273
HS +HRD+K N LL + D +K DFG++ QI + VG+P+++APEV
Sbjct: 116 YLHSERKIHRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 172
Query: 274 LLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL---IS 329
+ + Y +AD+W+ G+ L G PP + + K + P L S
Sbjct: 173 IKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK------NSPPTLEGQYS 226
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
K+ + L P R TA E+L H +I
Sbjct: 227 KPFKEFVEACLNKDPRFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 3e-19
Identities = 87/319 (27%), Positives = 137/319 (42%), Gaps = 62/319 (19%)
Query: 95 DNIRDLYT-LGRKLGQGQFGTTYLCTEIATGIEFACK-----SISKRKLISREDVEDV-- 146
+I + Y G LG+G +G + TG A K IS R+ V
Sbjct: 4 FSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGI 63
Query: 147 ----RREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSER 200
RE++IM+ + H+NI+ + Y + +++VM++ A ++ DR I R S+
Sbjct: 64 HFTTLRELKIMNEIK-HENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKI-RLTESQV 121
Query: 201 KAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF------- 253
K L +I+ G+ H MHRDL P N + +K K DFGL+ +
Sbjct: 122 KCI-LLQILNGL-NVLHKWYFMHRDLSPANIFINSKGI---CKIADFGLARRYGYPPYSD 176
Query: 254 --------KPGQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWA 303
+ + T V + +Y APE+L+ + Y D+W+ G I LL+G P F
Sbjct: 177 TLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG 236
Query: 304 ET---QQG-IFDAV-------------LKGHIDFE-------SDPWPLISDSAKDLIRKM 339
E Q G IF+ + L + +F +P SD A DL++ +
Sbjct: 237 ENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSL 296
Query: 340 LCSQPSERLTAHEVLCHPW 358
L P ER++A E L H +
Sbjct: 297 LKLNPLERISAKEALKHEY 315
|
Length = 335 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 3e-19
Identities = 86/319 (26%), Positives = 126/319 (39%), Gaps = 81/319 (25%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED------VRREIQI 152
D + + ++G+G +G Y + TG A K + R D E REI+I
Sbjct: 7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKV-------RLDNEKEGFPITAIREIKI 59
Query: 153 MHHLAGHKNIVTI----------------KGA------YEDSLCVHIVMELCAGGELFDR 190
+ L H+NIV + KGA Y D H +M L G +
Sbjct: 60 LRQLN-HRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMD----HDLMGLLESGLV--- 111
Query: 191 IIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250
H+SE + ++ + CH +HRD+K N LL NK +K DFGL+
Sbjct: 112 -----HFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ---IKLADFGLA 163
Query: 251 VFFKPG--QIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQ 306
+ + +T+ V + +Y PE+LL + YGP DVW+ G IL L + P F A +
Sbjct: 164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE 223
Query: 307 QGIFDAVLKGHIDFESDPWP--------------------------LISDSAKDLIRKML 340
+ + + WP I A DL+ ML
Sbjct: 224 LAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHML 283
Query: 341 CSQPSERLTAHEVLCHPWI 359
PS+R TA E L PW+
Sbjct: 284 TLDPSKRCTAEEALNSPWL 302
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 87.6 bits (217), Expect = 4e-19
Identities = 81/293 (27%), Positives = 132/293 (45%), Gaps = 56/293 (19%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR-REIQIMHHLAGHKNIVT 164
K+G+G +G Y TG A K I R E V REI ++ L H NIV
Sbjct: 7 KIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIVK 63
Query: 165 IKGAYEDSLCVHIV-----------MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
+ +++V M+ + +I+ + L +++ G+
Sbjct: 64 LLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIK---------SYLFQLLQGLA 114
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPE 272
CHS V+HRDLKP+N LL+N + ++K DFGL+ F P + +T V + +Y APE
Sbjct: 115 -FCHSHRVLHRDLKPQN-LLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 170
Query: 273 VLL--KHYGPEADVWTAGVILYILLS--GVPPFWAETQQ--GIF-------DAVLKGHI- 318
+LL K+Y D+W+ G I +++ + P +E Q IF + V G
Sbjct: 171 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 230
Query: 319 --DFESD--PW---------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
D++ W P + + +DL+ +ML P++R++A L HP+
Sbjct: 231 LPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 4e-19
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 34/270 (12%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G +G Y +++T + A K I +R V+ + EI + +L H+NIV
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLK-HRNIVQYL 71
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE-----LTRIIVGVVEACHSLGV 221
G+ ++ I ME GG L + R + K E T+ I+ ++ H +
Sbjct: 72 GSDSENGFFKIFMEQVPGGSLSA--LLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI 129
Query: 222 MHRDLKPENFLLVNKDDDFS--LKAIDFGLS---VFFKP-GQIFTDVVGSPYYVAPEVL- 274
+HRD+K +N +LVN +S +K DFG S P + FT G+ Y+APEV+
Sbjct: 130 VHRDIKGDN-VLVNT---YSGVVKISDFGTSKRLAGINPCTETFT---GTLQYMAPEVID 182
Query: 275 --LKHYGPEADVWTAGVILYILLSGVPPFW--AETQQGIFD-AVLKGHIDFESDPWPLIS 329
+ YG AD+W+ G + + +G PPF E Q +F + K H + +S
Sbjct: 183 KGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPES----LS 238
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
AK+ I + P +R +AH++L P++
Sbjct: 239 AEAKNFILRCFEPDPDKRASAHDLLQDPFL 268
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 86.7 bits (214), Expect = 6e-19
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH 159
++ L +G G +G Y + TG A K + ++ ++ E++++EI ++ + H
Sbjct: 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHH 62
Query: 160 KNIVTIKGAY--------EDSLCVHIVMELCAGGELFDRI--IQRGHYSERKAAELTRII 209
+NI T GA+ +D L +VME C G + D I + E A + R I
Sbjct: 63 RNIATYYGAFIKKNPPGMDDQLW--LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 120
Query: 210 VGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP--GQIFTDVVGSPY 267
+ + H V+HRD+K +N LL ++ +K +DFG+S G+ T +G+PY
Sbjct: 121 LRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPY 176
Query: 268 YVAPEVLLKHYGPEA------DVWTAGVILYILLSGVPPFW-AETQQGIFDAVLKGHIDF 320
++APEV+ P+A D+W+ G+ + G PP + +F
Sbjct: 177 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL 236
Query: 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+S W S + I L S+R T +++ HP+I
Sbjct: 237 KSKKW---SKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 85.5 bits (211), Expect = 2e-18
Identities = 81/273 (29%), Positives = 119/273 (43%), Gaps = 35/273 (12%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y L +++G G +G Y + TG A K I KL +D +++EI M H
Sbjct: 11 YELIQRVGSGTYGDVYKARNLHTGELAAVKII---KLEPGDDFSLIQQEI-FMVKECKHC 66
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV G+Y + I ME C GG L D G SE + A + R + + HS G
Sbjct: 67 NIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG 126
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV------VGSPYYVAPEVL 274
MHRD+K N LL + D +K DFG++ +I + +G+PY++APEV
Sbjct: 127 KMHRDIKGANILLTDNGD---VKLADFGVA-----AKITATIAKRKSFIGTPYWMAPEVA 178
Query: 275 LKH----YGPEADVWTAGVILYILLSGVPP-FWAETQQGIFDAVLKGHIDFESDPWPLIS 329
Y D+W G+ L PP F + +F L +F+ P +
Sbjct: 179 AVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMSKSNFQP---PKLK 232
Query: 330 DSAK------DLIRKMLCSQPSERLTAHEVLCH 356
D K + ++ L P +R TA +L H
Sbjct: 233 DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 87.0 bits (215), Expect = 2e-18
Identities = 88/323 (27%), Positives = 139/323 (43%), Gaps = 54/323 (16%)
Query: 83 DNQTYYV-LGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE 141
D+Q Y V + T + Y + +G G G + GI A K +S R ++
Sbjct: 4 DSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQT 62
Query: 142 DVEDVRREIQIMHHLAGHKNIVTIKGAY------EDSLCVHIVMELCAGGELFDRIIQRG 195
+ RE+ ++ HKNI+++ + E+ V++VMEL ++I
Sbjct: 63 HAKRAYREL-VLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN--LCQVIHME 119
Query: 196 HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255
ER + L +++ G+ + HS G++HRDLKP N ++ D +LK +DFGL+
Sbjct: 120 LDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACT 175
Query: 256 GQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS------------------ 296
+ T V + YY APEV+L Y D+W+ G I+ L+
Sbjct: 176 NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVI 235
Query: 297 ---GVPP--FWAETQQGIFDAVLKG----HIDFES--DPWPLISDS---------AKDLI 336
G P F Q + + V I FE W S+S A+DL+
Sbjct: 236 EQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLL 295
Query: 337 RKMLCSQPSERLTAHEVLCHPWI 359
KML P +R++ E L HP+I
Sbjct: 296 SKMLVIDPDKRISVDEALRHPYI 318
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 85.1 bits (211), Expect = 3e-18
Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 40/295 (13%)
Query: 82 IDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE 141
ID Q Y D + DL LG ++G G G Y TG A K + R+ ++E
Sbjct: 5 IDGQKY-----PAD-LNDLENLG-EIGSGTCGQVYKMRFKKTGHVMAVKQM--RRTGNKE 55
Query: 142 DVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR--GHYSE 199
+ + + ++ ++ IV G + V I MEL + D++++R G E
Sbjct: 56 ENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS--TCLDKLLKRIQGPIPE 113
Query: 200 RKAAELTRIIVGVVEACHSL----GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255
++T V +V+A H L GV+HRD+KP N LL D ++K DFG+S
Sbjct: 114 DILGKMT---VAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLVD 167
Query: 256 GQIFTDVVGSPYYVAPEVL-----LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIF 310
+ T G Y+APE + Y ADVW+ G+ L L +G P+ + + F
Sbjct: 168 SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPY--KNCKTEF 225
Query: 311 DAVLKGHIDFESDPWPLISDSA------KDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ + K + P + + + L +R E+L HP+I
Sbjct: 226 EVLTK----ILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 3e-18
Identities = 84/313 (26%), Positives = 128/313 (40%), Gaps = 76/313 (24%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMH 154
D LG +LG G G +G+ I RKLI E +R RE++++H
Sbjct: 2 DFEKLG-ELGAGNGGVVTKVLHRPSGL------IMARKLIHLEIKPAIRNQIIRELKVLH 54
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
IV GA+ + I ME GG L D+++ +KA + I+G +
Sbjct: 55 E-CNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL-------KKAGRIPENILGKIS 105
Query: 215 ACHSLG---------VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV--- 262
G +MHRD+KP N +LVN + +K DFG+S GQ+ +
Sbjct: 106 IAVLRGLTYLREKHKIMHRDVKPSN-ILVNSRGE--IKLCDFGVS-----GQLIDSMANS 157
Query: 263 -VGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQG---IFDAVLK-- 315
VG+ Y++PE L HY ++D+W+ G+ L + G P + +F +
Sbjct: 158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEG 217
Query: 316 ----------GHID--------FE------SDPWPLI-----SDSAKDLIRKMLCSQPSE 346
GH FE ++P P + SD +D + K L P E
Sbjct: 218 EAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKE 277
Query: 347 RLTAHEVLCHPWI 359
R E+ HP+I
Sbjct: 278 RADLKELTKHPFI 290
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 5e-18
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 18/255 (7%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
R +G+G + L T +A K + K + ED++ V+ E + + H +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 60
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+ ++ + V+E GG+L + ++ E A + I + H G+++R
Sbjct: 61 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 120
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEA 282
DLK +N LL D + +K D+G+ +PG + G+P Y+APE+L + YG
Sbjct: 121 DLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 177
Query: 283 DVWTAGVILYILLSGVPPF---------WAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333
D W GV+++ +++G PF T+ +F +L+ I +S A
Sbjct: 178 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----LSVKAA 233
Query: 334 DLIRKMLCSQPSERL 348
+++ L P ERL
Sbjct: 234 SVLKSFLNKDPKERL 248
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 5e-18
Identities = 86/292 (29%), Positives = 124/292 (42%), Gaps = 58/292 (19%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSI---SKRKLISREDVEDVRREIQIMHH 155
DL T+ LG G G+ I TG A K + +K + + + RE+QIMH
Sbjct: 6 DLETI-SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQ-----ILRELQIMHE 59
Query: 156 LAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELT-----RIIV 210
IV+ GA+ + + + ME G L DRI +K + +I V
Sbjct: 60 -CRSPYIVSFYGAFLNENNICMCMEFMDCGSL-DRIY-------KKGGPIPVEILGKIAV 110
Query: 211 GVVEACHSL----GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV---- 262
VVE L +MHRD+KP N +LVN +K DFG+S G++ +
Sbjct: 111 AVVEGLTYLYNVHRIMHRDIKPSN-ILVNSRGQ--IKLCDFGVS-----GELINSIADTF 162
Query: 263 VGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQ--------GIFDAV 313
VG+ Y++PE + Y ++DVW+ G+ + L G PF GI D
Sbjct: 163 VGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD-- 220
Query: 314 LKGHIDFESDPWPLISDS----AKDLIRKMLCSQPSERLTAHEVLC--HPWI 359
L I E P L S +D + L P+ER T + LC P+I
Sbjct: 221 LLQQIVQEPPP-RLPSSDFPEDLRDFVDACLLKDPTERPTPQQ-LCAMPPFI 270
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 1e-17
Identities = 78/288 (27%), Positives = 121/288 (42%), Gaps = 46/288 (15%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMHHLAGHKN 161
K+G+G +GT + T A K + +D E V REI ++ L HKN
Sbjct: 7 KIGEGTYGTVFKAKNRETHEIVALKRVR-----LDDDDEGVPSSALREICLLKELK-HKN 60
Query: 162 IVTIKGAYEDSLCVHIVMELCAGG--ELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL 219
IV + + +V E C + FD G ++ + CHS
Sbjct: 61 IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSH 118
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEVLL--K 276
V+HRDLKP+N LL+NK+ + LK DFGL+ F P + ++ V + +Y P+VL K
Sbjct: 119 NVLHRDLKPQN-LLINKNGE--LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 175
Query: 277 HYGPEADVWTAGVILYILL-SGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD----- 330
Y D+W+AG I L +G P F + + + WP +S
Sbjct: 176 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYK 235
Query: 331 --------------------SAKDLIRKMLCSQPSERLTAHEVLCHPW 358
+ +DL++ +L P +R++A E L HP+
Sbjct: 236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 1e-17
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 47/294 (15%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED--VEDVRREIQIMHHLAG 158
YT K+G+G +G Y TG A K I +L S E+ REI ++ L
Sbjct: 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKI---RLESEEEGVPSTAIREISLLKELQ- 57
Query: 159 HKNIVTIKGAYEDSLCVHIVME-LCAGGELFDRIIQRGHYSERKAAE--LTRIIVGVVEA 215
H NIV ++ ++++ E L + + + +G Y + + + L +I+ G++
Sbjct: 58 HPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGIL-F 116
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVL 274
CHS V+HRDLKP+N L+ D+ +K DFGL+ F P +++T V + +Y APEVL
Sbjct: 117 CHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVL 173
Query: 275 L--KHYGPEADVWTAGVILYILLSGVPPFW--AETQQ--GIF-------DAVLKGHIDFE 321
L Y D+W+ G I + + P F +E Q IF + V G
Sbjct: 174 LGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPG---VT 230
Query: 322 SDP--------W---------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
S P W + + DL+ KML P++R++A + L HP+
Sbjct: 231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 2e-17
Identities = 80/292 (27%), Positives = 131/292 (44%), Gaps = 46/292 (15%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMHHLA 157
LG +G+G +G C TG A K K + ED + V+ REI+++ L
Sbjct: 5 NLG-LVGEGSYGMVMKCKHKETGQIVAIK-----KFLESEDDKMVKKIAMREIRMLKQLR 58
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFD-RIIQRGHYSERKAAELTRIIVGVVEAC 216
H+N+V + + +++V E L D G R L +I+ G+ E C
Sbjct: 59 -HENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGI-EFC 116
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEVLL 275
HS ++HRD+KPEN +LV++ +K DFG + PG+++TD V + +Y APE+L+
Sbjct: 117 HSHNIIHRDIKPEN-ILVSQSG--VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLV 173
Query: 276 K--HYGPEADVWTAGVILYILLSGVPPF------------------WAETQQGIFD--AV 313
YG D+W G ++ +L+G P F Q IF +
Sbjct: 174 GDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233
Query: 314 LKG-------HIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
G I+ +P +S DL ++ L P +R ++ ++L H +
Sbjct: 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 81.6 bits (201), Expect = 3e-17
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 31/226 (13%)
Query: 97 IRD---LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
+RD ++ L +G G +G Y + TG A K + ++ ++ E+++ EI ++
Sbjct: 11 LRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTEDEEEEIKLEINML 66
Query: 154 HHLAGHKNIVTIKGAY--------EDSLCVHIVMELCAGGELFDRI--IQRGHYSERKAA 203
+ H+NI T GA+ +D L +VME C G + D + + E A
Sbjct: 67 KKYSHHRNIATYYGAFIKKSPPGHDDQLW--LVMEFCGAGSVTDLVKNTKGNALKEDWIA 124
Query: 204 ELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP--GQIFTD 261
+ R I+ + H+ V+HRD+K +N LL ++ +K +DFG+S G+ T
Sbjct: 125 YICREILRGLAHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNT- 180
Query: 262 VVGSPYYVAPEVLLKHYGPEA------DVWTAGVILYILLSGVPPF 301
+G+PY++APEV+ P+A D+W+ G+ + G PP
Sbjct: 181 FIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 226
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 4e-17
Identities = 84/296 (28%), Positives = 127/296 (42%), Gaps = 47/296 (15%)
Query: 103 LGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE-DVRREIQIMHHLAGHKN 161
L R +G+G +G Y + +G A K + R+ + REI ++ +L H N
Sbjct: 12 LNR-IGEGTYGIVYRARDTTSGEIVALKKVRMDN--ERDGIPISSLREITLLLNLR-HPN 67
Query: 162 IVTIK----GAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSERKAAELTRIIVGVVEA 215
IV +K G + DS + +VME C L D + +SE + L ++ ++
Sbjct: 68 IVELKEVVVGKHLDS--IFLVMEYCEQDLASLLDNMPTP--FSESQVKCLMLQLLRGLQY 123
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVL 274
H ++HRDLK N LL +K LK DFGL+ + P + T V + +Y APE+L
Sbjct: 124 LHENFIIHRDLKVSNLLLTDKG---CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELL 180
Query: 275 L--KHYGPEADVWTAGVILYILLSGVP--PFWAETQQ-----------------GIFDAV 313
L Y D+W G IL LL+ P P +E +Q G D
Sbjct: 181 LGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240
Query: 314 LKGHIDFESDPW-------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362
L G P+ P +S++ L+ +L P +R TA E L + E
Sbjct: 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK 296
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 4e-17
Identities = 83/331 (25%), Positives = 131/331 (39%), Gaps = 88/331 (26%)
Query: 100 LYTLGRKLGQGQFGTTYLCTEIA--TGIEFACKSISKRKL----ISREDVEDVRREIQIM 153
Y + +G+G +G Y G E+A K K IS+ REI ++
Sbjct: 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSAC----REIALL 56
Query: 154 HHLAGHKNIVTIKGAYEDS--LCVHIVMELCAGGELFD--RIIQRGHYSERKAAELTRII 209
L H+N+V++ + + V+++ + D +II+ + + K + +
Sbjct: 57 RELK-HENVVSLVEVFLEHADKSVYLLFDYAE----HDLWQIIK--FHRQAKRVSIPPSM 109
Query: 210 V---------GVVEACHSLGVMHRDLKPENFLLV-NKDDDFSLKAIDFGLS-VFFKPGQI 258
V GV HS V+HRDLKP N L++ + +K D GL+ +F P +
Sbjct: 110 VKSLLWQILNGV-HYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP 168
Query: 259 FTD---VVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVP-------------P 300
D VV + +Y APE+LL +HY D+W G I LL+ P P
Sbjct: 169 LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNP 228
Query: 301 FWAETQQGIFDAVLKGHIDFESDPWPLI-------------------------------- 328
F + + IF+ + G WP I
Sbjct: 229 FQRDQLERIFE--VLGTPT--EKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKK 284
Query: 329 -SDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
DL+RK+L P++R+TA E L HP+
Sbjct: 285 PDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 81.5 bits (201), Expect = 4e-17
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN---IV 163
+G+G FG Y C + TG +A K + K++ I + E + +IM L + IV
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKR-IKMKQGETLALNERIMLSLVSTGDCPFIV 60
Query: 164 TIKGAYE--DSLCVHIVMELCAGGELFDRIIQRGHYSERK----AAELTRIIVGVVEACH 217
+ A+ D L +++L GG+L + Q G +SE + AAE II+G+ E H
Sbjct: 61 CMSYAFHTPDKLS--FILDLMNGGDLHYHLSQHGVFSEAEMRFYAAE---IILGL-EHMH 114
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK- 276
+ V++RDLKP N LL D+ ++ D GL+ F + VG+ Y+APEVL K
Sbjct: 115 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 170
Query: 277 -HYGPEADVWTAGVILYILLSGVPPF 301
Y AD ++ G +L+ LL G PF
Sbjct: 171 VAYDSSADWFSLGCMLFKLLRGHSPF 196
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 81.9 bits (202), Expect = 6e-17
Identities = 87/298 (29%), Positives = 135/298 (45%), Gaps = 55/298 (18%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
YT +++G G +G+ + TG + A K +S R S + RE+ ++ H+ H+
Sbjct: 17 YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLS-RPFQSEIFAKRAYRELTLLKHMQ-HE 74
Query: 161 NIV------TIKGAYEDSLCVHIVMELCAGGELFDRI----IQRGHYSERKAAELTRIIV 210
N++ T + ++ ++VM + + I SE K L ++
Sbjct: 75 NVIGLLDVFTSAVSGDEFQDFYLVMP-------YMQTDLQKIMGHPLSEDKVQYLVYQML 127
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVA 270
++ HS G++HRDLKP N L VN+D + LK +DFGL+ T V + +Y A
Sbjct: 128 CGLKYIHSAGIIHRDLKPGN-LAVNEDCE--LKILDFGLAR--HADAEMTGYVVTRWYRA 182
Query: 271 PEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAE------TQ-------------QGI 309
PEV+L HY D+W+ G I+ +L+G F + TQ Q +
Sbjct: 183 PEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKL 242
Query: 310 FDAVLKGHI---------DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
D K +I DF S +P S A DL+ KML +RLTA E L HP+
Sbjct: 243 EDKAAKSYIKSLPKYPRKDF-STLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPY 299
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 82.1 bits (202), Expect = 6e-17
Identities = 87/322 (27%), Positives = 140/322 (43%), Gaps = 54/322 (16%)
Query: 84 NQTYYV-LGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED 142
NQ Y V +G T + Y + +G G G + A K +S R ++
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTH 59
Query: 143 VEDVRREIQIMHHLAGHKNIVTIKGAY------EDSLCVHIVMELCAGGELFDRIIQRGH 196
+ RE+ +M HKNI+++ + E+ V++VMEL ++IQ
Sbjct: 60 AKRAYRELVLMK-CVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMEL 116
Query: 197 YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256
ER + L +++ G+ + HS G++HRDLKP N ++ D +LK +DFGL+
Sbjct: 117 DHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTS 172
Query: 257 QIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVIL------YILLSG------------ 297
+ T V + YY APEV+L Y D+W+ G I+ IL G
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232
Query: 298 -----VPPFWAETQQGIFDAVLK----GHIDF-----------ESDPWPLISDSAKDLIR 337
P F + Q + + V + F +S+ L + A+DL+
Sbjct: 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 292
Query: 338 KMLCSQPSERLTAHEVLCHPWI 359
KML P++R++ E L HP+I
Sbjct: 293 KMLVIDPAKRISVDEALQHPYI 314
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 1e-16
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 63/263 (23%)
Query: 148 REIQIMHHLAGHKNIV------TIKGAYEDSLCVHIVME-----LCAGGELFDRIIQRGH 196
RE+ +M L HKNI+ T + + E+ V++VME LC ++IQ
Sbjct: 64 RELVLMK-LVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLC-------QVIQMDL 115
Query: 197 YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256
ER + L +++ G+ + HS G++HRDLKP N ++V D +LK +DFGL+
Sbjct: 116 DHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSN-IVVK--SDCTLKILDFGLARTAGTS 171
Query: 257 QIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVIL---------------------YIL 294
+ T V + YY APEV+L Y D+W+ G I+ I
Sbjct: 172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIE 231
Query: 295 LSGVPP--FWAETQQGIFDAVL-----KGH-ID--FESDPWPLISDS--------AKDLI 336
G P F + Q + + V G+ + F +P S+S A+DL+
Sbjct: 232 QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLL 291
Query: 337 RKMLCSQPSERLTAHEVLCHPWI 359
KML P +R++ + L HP+I
Sbjct: 292 SKMLVIDPEKRISVDDALQHPYI 314
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 80.1 bits (197), Expect = 2e-16
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 16/253 (6%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
R +G+G + L +A K + K + ED++ V+ E + + + +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+ ++ + + +V+E GG+L + ++ E A I + H G+++R
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEA 282
DLK +N LL D D +K D+G+ PG + G+P Y+APE+L + YG
Sbjct: 121 DLKLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177
Query: 283 DVWTAGVILYILLSGVPPF-------WAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335
D W GV+++ +++G PF T+ +F +L+ I +S A +
Sbjct: 178 DWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPR----FLSVKASHV 233
Query: 336 IRKMLCSQPSERL 348
++ L P ERL
Sbjct: 234 LKGFLNKDPKERL 246
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 2e-16
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 478 HLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVA 535
L AF+ FDKDG G I+ DEL+ A +++ ++++IREVD+D DG+ID+ EF+
Sbjct: 1 ELREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLE 60
Query: 536 MMQ 538
+M
Sbjct: 61 LMA 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 3e-16
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 28/209 (13%)
Query: 105 RKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
++LG+G FG LC TG + A KS+ + D REI+I+ L H+
Sbjct: 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSL--NHSGEEQHRSDFEREIEILRTLD-HE 66
Query: 161 NIVTIKGAYED----SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI---IVGVV 213
NIV KG E SL ++ME G L R + H + L I +
Sbjct: 67 NIVKYKGVCEKPGGRSLR--LIMEYLPSGSL--RDYLQRHRDQINLKRLLLFSSQICKGM 122
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSP-----YY 268
+ S +HRDL N L+ + + +K DFGL+ + + V P ++
Sbjct: 123 DYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLAKVLPEDKDYY-YVKEPGESPIFW 178
Query: 269 VAPEVL-LKHYGPEADVWTAGVILYILLS 296
APE L + +DVW+ GV LY L +
Sbjct: 179 YAPECLRTSKFSSASDVWSFGVTLYELFT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 3e-16
Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN---IV 163
+G+G FG Y C + TG +A K + K+++ ++ E + +IM L + IV
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTGDCPFIV 60
Query: 164 TIKGAYE--DSLCVHIVMELCAGGELFDRIIQRGHYSERKAA-ELTRIIVGVVEACHSLG 220
+ A+ D LC +++L GG+L + Q G +SE++ T II+G+ E H+
Sbjct: 61 CMTYAFHTPDKLC--FILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGL-EHMHNRF 117
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HY 278
V++RDLKP N LL D+ ++ D GL+ F + VG+ Y+APEVL K Y
Sbjct: 118 VVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGTAY 173
Query: 279 GPEADVWTAGVILYILLSGVPPF 301
AD ++ G +L+ LL G PF
Sbjct: 174 DSSADWFSLGCMLFKLLRGHSPF 196
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 4e-16
Identities = 81/309 (26%), Positives = 128/309 (41%), Gaps = 64/309 (20%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE----DVRREIQIMHHL 156
Y K+GQG FG + T A K + L+ E E REI+I+ L
Sbjct: 14 YEKLAKIGQGTFGEVFKARHKKTKQIVALKKV----LMENEK-EGFPITALREIKILQLL 68
Query: 157 AGHKNIV-------TIKGAYE-DSLCVHIVMELCA---GGELFDRIIQRGHYSERKAAEL 205
H+N+V T Y ++V E C G L ++ ++ ++ + ++
Sbjct: 69 K-HENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVK---FTLSEIKKV 124
Query: 206 TRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF------KPGQIF 259
++++ + H ++HRD+K N L+ D LK DFGL+ F KP +
Sbjct: 125 MKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADFGLARAFSLSKNSKP-NRY 180
Query: 260 TDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAV--LK 315
T+ V + +Y PE+LL + YGP D+W AG I+ + + P T+Q + L
Sbjct: 181 TNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC 240
Query: 316 GHIDFESDP-------------------------WPLISD-SAKDLIRKMLCSQPSERLT 349
G I E P P + D A DLI K+L P++R+
Sbjct: 241 GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRID 300
Query: 350 AHEVLCHPW 358
A L H +
Sbjct: 301 ADTALNHDF 309
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 79.5 bits (197), Expect = 4e-16
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 38/178 (21%)
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF------KPGQIFTDVVGSPYYVA 270
HS V+HRDLKP N LL + D +K DFGL+ + TD V + +Y A
Sbjct: 124 HSGNVIHRDLKPSNILL---NSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRA 180
Query: 271 PEVLL--KHYGPEADVWTAGVILYILLSGVPPF----------------WAETQQGI--- 309
PE+LL Y D+W+ G IL +L G P F + + I
Sbjct: 181 PEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESI 240
Query: 310 --------FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
D++ + P SD A DL++K+L P++RLTA E L HP++
Sbjct: 241 KSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYV 298
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 78.9 bits (195), Expect = 5e-16
Identities = 79/322 (24%), Positives = 127/322 (39%), Gaps = 76/322 (23%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED-----VRREI 150
+RD Y + KLG+G FG Y +I TG A K I L+ E +D REI
Sbjct: 6 KLRD-YEILGKLGEGTFGEVYKARQIKTGRVVALKKI----LMHNE--KDGFPITALREI 58
Query: 151 QIMHHLAGHKNIVTI--------KGAYEDSLCVHIVM-----ELCAGGELFDRIIQRGHY 197
+I+ L H N+V + + V++V +L G L +
Sbjct: 59 KILKKLK-HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLS--GLLEN---PSVKL 112
Query: 198 SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPG 256
+E + ++ + H ++HRD+K N L+ N+ LK DFGL+ + P
Sbjct: 113 TESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQG---ILKIADFGLARPYDGPP 169
Query: 257 QI-----------FTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWA 303
+T++V + +Y PE+LL + Y D+W G + + + P
Sbjct: 170 PNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQG 229
Query: 304 ETQ--QG--IFDAV----------------LKGHIDFESDP-------WPLISDSAKDLI 336
++ Q IF +G F + P L + DL+
Sbjct: 230 KSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGL-DLL 288
Query: 337 RKMLCSQPSERLTAHEVLCHPW 358
K+L P +RLTA + L HP+
Sbjct: 289 SKLLSLDPYKRLTASDALEHPY 310
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 6e-16
Identities = 78/279 (27%), Positives = 120/279 (43%), Gaps = 44/279 (15%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT-------EIATGIEFACKSISKRKLISREDVEDVRREI 150
R+ TLGR +G+GQFG Y +IA ++ CK+ + S E +E
Sbjct: 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVK-TCKNCT-----SPSVREKFLQEA 58
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELT--RI 208
IM H +IV + G ++ V IVMEL GEL Y + L +
Sbjct: 59 YIMRQF-DHPHIVKLIGVITEN-PVWIVMELAPLGEL-------RSYLQVNKYSLDLASL 109
Query: 209 IVGVVEAC------HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV 262
I+ + S +HRD+ N L+ + D +K DFGLS + + +
Sbjct: 110 ILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD---CVKLGDFGLSRYLEDESYYKAS 166
Query: 263 VGS-PY-YVAPE-VLLKHYGPEADVWTAGVILY-ILLSGVPPFWAETQQGIFDAVLKGHI 318
G P ++APE + + + +DVW GV ++ IL+ GV PF QG+ + + G I
Sbjct: 167 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPF-----QGVKNNDVIGRI 221
Query: 319 DF-ESDPWP-LISDSAKDLIRKMLCSQPSERLTAHEVLC 355
+ E P P + L+ K PS+R E+
Sbjct: 222 ENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 6e-16
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 23/264 (8%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
R +G+G + L T +A K I K + ED++ V+ E + + H +V
Sbjct: 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVG 60
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+ ++ + V+E +GG+L + ++ E A + I + H G+++R
Sbjct: 61 LHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYR 120
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGL-SVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEA 282
DLK +N LL D + +K D+G+ +PG + G+P Y+APE+L + YG
Sbjct: 121 DLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 177
Query: 283 DVWTAGVILYILLSGVPPF---------WAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333
D W GV+++ +++G PF T+ +F +L+ I +S A
Sbjct: 178 DWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS----LSVKAS 233
Query: 334 DLIRKMLCSQPSERLTAHEVLCHP 357
+++ L P ERL CHP
Sbjct: 234 SVLKGFLNKDPKERLG-----CHP 252
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 8e-16
Identities = 90/339 (26%), Positives = 143/339 (42%), Gaps = 66/339 (19%)
Query: 69 ISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFA 128
+S SK+DN N +G T + Y + +G G G + A
Sbjct: 1 MSRSKRDN-------NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVA 53
Query: 129 CKSISKRKLISREDVEDVRREIQIMHHLAGHKNIV------TIKGAYEDSLCVHIVMELC 182
K +S R ++ + RE+ +M HKNI+ T + + E+ V+IVMEL
Sbjct: 54 IKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 183 AGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSL 242
++IQ ER + L +++ G+ + HS G++HRDLKP N ++ D +L
Sbjct: 112 DAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTL 165
Query: 243 KAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSG---- 297
K +DFGL+ + T V + YY APEV+L Y D+W+ G I+ ++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 298 -------------------VPPFWAETQ------------------QGIFDAVLKGHIDF 320
P F + Q + +F VL
Sbjct: 226 PGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL---FPA 282
Query: 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+S+ L + A+DL+ KML S+R++ E L HP+I
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 71.0 bits (175), Expect = 1e-15
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 466
L+E F+ D D G I+ DELKA L+ G L + EI +++ D D G ID+ EF+
Sbjct: 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLEL 61
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 77.0 bits (189), Expect = 1e-15
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 48/288 (16%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMHHLAGHKNI 162
+G+G +G C T + ++ +K E+ E+V+ RE++++ L +NI
Sbjct: 9 VGEGAYGVVLKCRHKETK-----EIVAIKKFKDSEENEEVKETTLRELKMLRTLK-QENI 62
Query: 163 VTIKGAYEDSLCVHIVMELCAGG--ELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
V +K A+ +++V E EL + + G E+ + + ++I + CH
Sbjct: 63 VELKEAFRRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLI-KAIHWCHKND 120
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI--FTDVVGSPYYVAPEVLL-KH 277
++HRD+KPEN LL++ +D LK DFG + G +T+ V + +Y +PE+LL
Sbjct: 121 IVHRDIKPEN-LLISHND--VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP 177
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAET------------------QQGIFDAVLKGH-I 318
YG D+W+ G IL L G P F E+ Q +F + + H +
Sbjct: 178 YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL 237
Query: 319 DFESDPWP---------LISDSAKDLIRKMLCSQPSERLTAHEVLCHP 357
F + P ++S DL++ +L P++R + L HP
Sbjct: 238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 77.8 bits (191), Expect = 1e-15
Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 50/293 (17%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIV--- 163
+G G +G+ + TG+ A K +S R S + RE++++ H+ H+N++
Sbjct: 25 VGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMK-HENVIGLL 82
Query: 164 ---TIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
T + E+ V++V L G +L + I++ ++ L I+ ++ HS
Sbjct: 83 DVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 140
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HY 278
++HRDLKP N L VN +D LK +DFGL+ T V + +Y APE++L HY
Sbjct: 141 IIHRDLKPSN-LAVN--EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 195
Query: 279 GPEADVWTAGVILYILLS---------------------GVPPFWAETQQGIFDAVLKGH 317
D+W+ G I+ LL+ G P AE + I + +
Sbjct: 196 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG--AELLKKISSESARNY 253
Query: 318 I---------DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361
I +F + + + A DL+ KML +R+TA + L H + +
Sbjct: 254 IQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 2e-15
Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMHHLAGH 159
++G G GT Y TG +A K I + ED VR REI+I+ H
Sbjct: 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYG----NHED--TVRRQICREIEILRD-VNH 131
Query: 160 KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL 219
N+V ++ + + +++E GG L I E+ A++ R I+ + H
Sbjct: 132 PNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI----ADEQFLADVARQILSGIAYLHRR 187
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVL---L 275
++HRD+KP N L+ + ++K DFG+S + + VG+ Y++PE + L
Sbjct: 188 HIVHRDIKPSNLLI---NSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDL 244
Query: 276 KH--Y-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332
H Y G D+W+ GV + G PF +QG + A L I P + S
Sbjct: 245 NHGAYDGYAGDIWSLGVSILEFYLGRFPF-GVGRQGDW-ASLMCAICMSQPPEAPATASR 302
Query: 333 --KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRS 369
+ I L +P++R +A ++L HP+I +
Sbjct: 303 EFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQGQG 341
|
Length = 353 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 76.5 bits (188), Expect = 2e-15
Identities = 75/262 (28%), Positives = 113/262 (43%), Gaps = 23/262 (8%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG G GT Y + T A K I I+ E + + E++I++ I+
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVKVIPLD--ITVELQKQIMSELEILYKCDS-PYIIGFY 65
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH---SLGVMH 223
GA+ + I E GG L Y + L RI V VV+ SL ++H
Sbjct: 66 GAFFVENRISICTEFMDGGSL-------DVYRKIPEHVLGRIAVAVVKGLTYLWSLKILH 118
Query: 224 RDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEA 282
RD+KP N +LVN +K DFG+S I VG+ Y+APE + + YG +
Sbjct: 119 RDVKPSN-MLVNTRG--QVKLCDFGVSTQLV-NSIAKTYVGTNAYMAPERISGEQYGIHS 174
Query: 283 DVWTAGVILYILLSGVPPF-WAETQQGIFDAV--LKGHIDFESDPWP--LISDSAKDLIR 337
DVW+ G+ L G P+ + QG + L+ +D + P S+ I
Sbjct: 175 DVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFIT 234
Query: 338 KMLCSQPSERLTAHEVLCHPWI 359
+ + QP ER ++ HP+I
Sbjct: 235 QCMRKQPKERPAPENLMDHPFI 256
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 76.9 bits (189), Expect = 3e-15
Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 44/300 (14%)
Query: 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL 156
+ D Y +++G G +GT + TG + A K + R S + RE++++ H+
Sbjct: 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLY-RPFQSELFAKRAYRELRLLKHM 71
Query: 157 AGHKNIVTIKGAYEDSLCV------HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIV 210
H+N++ + + L + ++VM G ++++ SE + L ++
Sbjct: 72 K-HENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFLVYQML 128
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVA 270
++ H+ G++HRDLKP N L VN +D LK +DFGL+ + T V + +Y A
Sbjct: 129 KGLKYIHAAGIIHRDLKPGN-LAVN--EDCELKILDFGLAR--QTDSEMTGYVVTRWYRA 183
Query: 271 PEVLLK--HYGPEADVWTAGVILYILL---------------------SGVPP--FWAET 305
PEV+L HY D+W+ G I+ +L +G P F +
Sbjct: 184 PEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKL 243
Query: 306 QQGIFDAVLKGHIDFESDPW----PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361
Q +K F + P + A +++ KML R+TA E L HP+ E
Sbjct: 244 QSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 3e-15
Identities = 87/317 (27%), Positives = 130/317 (41%), Gaps = 84/317 (26%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSIS---------KRKLISREDVEDVRREIQ 151
Y +G G +G + +G + A K I KR L RE++
Sbjct: 7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTL----------RELK 56
Query: 152 IMHHLAGHKNIVTIKGAY----EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTR 207
I+ H H NI+ I+ D V++VM+L +L II H + E R
Sbjct: 57 ILRHFK-HDNIIAIRDILRPPGADFKDVYVVMDL-MESDL-HHII---HSDQPLTEEHIR 110
Query: 208 -----IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG----LSVFFKPGQI 258
++ G+ + HS V+HRDLKP N LLVN+ D L+ DFG LS +
Sbjct: 111 YFLYQLLRGL-KYIHSANVIHRDLKPSN-LLVNE--DCELRIGDFGMARGLSSSPTEHKY 166
Query: 259 F-TDVVGSPYYVAPEVLLK--HYGPEADVWTAGVI-------------------LYILLS 296
F T+ V + +Y APE+LL Y D+W+ G I L ++LS
Sbjct: 167 FMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILS 226
Query: 297 --GVPPFWAETQQGIFDAVLKGHI-----DFESD---PW----PLISDSAKDLIRKMLCS 342
G P + + + + + + PW P S A DL+ +ML
Sbjct: 227 VLGSPS------EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQF 280
Query: 343 QPSERLTAHEVLCHPWI 359
P ER+T + L HP++
Sbjct: 281 DPEERITVEQALQHPFL 297
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 3e-15
Identities = 63/221 (28%), Positives = 94/221 (42%), Gaps = 46/221 (20%)
Query: 105 RKLGQGQFGTT---YLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161
++LG G FG+ + +E A K++ + + + + + RE +M L H
Sbjct: 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKK--EFLREASVMAQL-DHPC 57
Query: 162 IVTIKG-AYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAEL-TRIIVGV--VEACH 217
IV + G + L +VMEL G L + +R EL ++ +G+ +E+ H
Sbjct: 58 IVRLIGVCKGEPLM--LVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH 115
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVA------P 271
+HRDL N LLVN+ K DFG+S GS YY A P
Sbjct: 116 ---FVHRDLAARNVLLVNRH---QAKISDFGMSRALGA--------GSDYYRATTAGRWP 161
Query: 272 EVLLKHYGPE----------ADVWTAGVILYILLS-GVPPF 301
LK Y PE +DVW+ GV L+ S G P+
Sbjct: 162 ---LKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPY 199
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 4e-15
Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 27/278 (9%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH----- 155
Y + R LG G GT ++ G FA K + + S D + E+ + +
Sbjct: 34 YWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFS 92
Query: 156 -LAGHKNIVTIKGAYEDS-LCVHIVMELCAGGELFDRIIQRGH----YSERKAAELTRII 209
+ H++ ++ L + +V++ G+L I R + E +A L +
Sbjct: 93 IVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQV 152
Query: 210 VGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV----VGS 265
+ V HS ++HRD+K N LL + +K DFG S + + DV G+
Sbjct: 153 LLAVHHVHSKHMIHRDIKSANILLCSNG---LVKLGDFGFSKMYA-ATVSDDVGRTFCGT 208
Query: 266 PYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP 324
PYYVAPE+ K Y +AD+++ GV+LY LL+ PF E + + L G DP
Sbjct: 209 PYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY----DP 264
Query: 325 WP-LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361
P IS ++++ +L S P R ++ ++L P IC+
Sbjct: 265 LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP-ICK 301
|
Length = 496 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 6e-15
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 31/230 (13%)
Query: 90 LGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRRE 149
LG TD + T+G+ G +G Y T G A K + IS D E++ E
Sbjct: 17 LGDPTDTWEIIETIGK----GTYGKVYKVTNKKDGSLAAVKILDP---ISDVD-EEIEAE 68
Query: 150 IQIMHHLAGHKNIVTIKGA-YEDSLCVH----IVMELCAGG---ELFDRIIQRGHYSERK 201
I+ L H N+V G Y+ V +V+ELC GG EL ++ G +
Sbjct: 69 YNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDE- 127
Query: 202 AAELTRIIVGVV---EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258
A ++ I+ G + + H+ ++HRD+K N LL + +K +DFG+S ++
Sbjct: 128 -AMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEG---GVKLVDFGVSAQLTSTRL 183
Query: 259 FTDV-VGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPF 301
+ VG+P+++APEV+ Y DVW+ G+ L G PP
Sbjct: 184 RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPL 233
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 75.9 bits (186), Expect = 6e-15
Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 44/292 (15%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIV- 163
+G G +G+ + + A K +S R S RE++++ H+ H+N++
Sbjct: 21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHMK-HENVIG 78
Query: 164 -----TIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
T + E+ V++V L G +L + I++ S+ L ++ ++ HS
Sbjct: 79 LLDVFTPATSIENFNEVYLVTNL-MGADL-NNIVKCQKLSDEHVQFLIYQLLRGLKYIHS 136
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-- 276
G++HRDLKP N + VN +D L+ +DFGL+ + T V + +Y APE++L
Sbjct: 137 AGIIHRDLKPSN-VAVN--EDCELRILDFGLAR--QADDEMTGYVATRWYRAPEIMLNWM 191
Query: 277 HYGPEADVWTAGVILYILLSGVPPF----WAETQQGIFDAVLKGHIDF------------ 320
HY D+W+ G I+ LL G F + + + I + V +
Sbjct: 192 HYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKY 251
Query: 321 -ESDPWPLISDSAK----------DLIRKMLCSQPSERLTAHEVLCHPWICE 361
+S P D K DL+ KML +R++A E L HP+ +
Sbjct: 252 IQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 74.6 bits (183), Expect = 1e-14
Identities = 78/302 (25%), Positives = 129/302 (42%), Gaps = 68/302 (22%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED---VEDVRREIQIMHHLAG--HK 160
++G G +GT Y + +G A KS+ ++ + ED + VR E+ ++ L H
Sbjct: 7 EIGVGAYGTVYKARDPHSGHFVALKSV---RVQTNEDGLPLSTVR-EVALLKRLEAFDHP 62
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGE---------LFDRIIQ--RGHYSE--------RK 201
NIV + M++CA +F+ + Q R + +
Sbjct: 63 NIVRL-------------MDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAET 109
Query: 202 AAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD 261
+L R + ++ H+ ++HRDLKPEN L+ + +K DFGL+ + T
Sbjct: 110 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG---QVKLADFGLARIYSCQMALTP 166
Query: 262 VVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQG----IFDAV-LK 315
VV + +Y APEVLL+ Y D+W+ G I + P F ++ IFD + L
Sbjct: 167 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 226
Query: 316 GHIDFESD------------PWPL------ISDSAKDLIRKMLCSQPSERLTAHEVLCHP 357
D+ D P P+ I +S L+ +ML P +R++A L HP
Sbjct: 227 PEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHP 286
Query: 358 WI 359
+
Sbjct: 287 FF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 1e-14
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 23/216 (10%)
Query: 147 RREIQIMHHLAGHKNIVTI--KGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE 204
RRE + L H NIV + G L + V E G L + + G A E
Sbjct: 26 RRETALCARLY-HPNIVALLDSGEAPPGL-LFAVFEYVPGRTLREVLAADGALP---AGE 80
Query: 205 LTRIIVGVVEA---CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG----- 256
R+++ V++A H+ G++HRDLKP+N ++ K +DFG+ PG
Sbjct: 81 TGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLL-PGVRDAD 139
Query: 257 ----QIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFD 311
T+V+G+P Y APE L + P +D++ G+I L+G + I
Sbjct: 140 VATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRVVQGASVAEILY 199
Query: 312 AVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSER 347
L +D PW + ++RK L P +R
Sbjct: 200 QQL-SPVDVSLPPW-IAGHPLGQVLRKALNKDPRQR 233
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 1e-14
Identities = 74/291 (25%), Positives = 112/291 (38%), Gaps = 56/291 (19%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR-------REIQIM 153
Y + R +G+G G YL + A K I RED+ + RE +I
Sbjct: 4 YDIIRLIGKGGMGEVYLAYDPVCSRRVALKKI-------REDLSENPLLKKRFLREAKIA 56
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFD--------RIIQRGHYSERKAAEL 205
L H IV + D V+ M G L + + +
Sbjct: 57 ADLI-HPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAF 115
Query: 206 TRI---IVGVVEACHSLGVMHRDLKPENFLL------------------VNKDDDFSLKA 244
I I +E HS GV+HRDLKP+N LL + ++D +
Sbjct: 116 LSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDV 175
Query: 245 IDFGL--SVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEA-DVWTAGVILYILLSGVPPF 301
+ + S PG+I VG+P Y+APE LL E+ D++ GVILY +L+ P+
Sbjct: 176 DERNICYSSMTIPGKI----VGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY 231
Query: 302 WAETQQGIFDAVLKGHIDF--ESDPWPLISDSAKDLIRKMLCSQPSERLTA 350
+ + I + I E P+ I + K L P+ER ++
Sbjct: 232 RRKKGRKI---SYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSS 279
|
Length = 932 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 2e-14
Identities = 83/308 (26%), Positives = 128/308 (41%), Gaps = 67/308 (21%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED---VRREIQIMHHLA 157
Y + +G+G +G + TG + A K I+ E V D + REI+++ L
Sbjct: 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIND----VFEHVSDATRILREIKLLRLLR 57
Query: 158 GHKNIVTIKG--------AYEDSLCVHIVMELCAGGELFDRI-----IQRGHYSERKAAE 204
H +IV IK ++D +++V EL +L I + H+
Sbjct: 58 -HPDIVEIKHIMLPPSRREFKD---IYVVFEL-MESDLHQVIKANDDLTPEHHQ----FF 108
Query: 205 LTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFK--PGQIF-T 260
L +++ + + H+ V HRDLKP+N L + D LK DFGL+ V F P IF T
Sbjct: 109 LYQLLRAL-KYIHTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWT 164
Query: 261 DVVGSPYYVAPEV---LLKHYGPEADVWTAGVILYILLSGVPPF---------------- 301
D V + +Y APE+ Y P D+W+ G I +L+G P F
Sbjct: 165 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLL 224
Query: 302 ---WAETQQGI--------FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTA 350
ET + ++ K S +P A L+ ++L P +R TA
Sbjct: 225 GTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTA 284
Query: 351 HEVLCHPW 358
E L P+
Sbjct: 285 EEALADPY 292
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 3e-14
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 10/101 (9%)
Query: 262 VVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF 320
++G+P Y+APE+LL K +GP D W GV L+ L+G+PPF ET Q +F +L I
Sbjct: 540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDI-- 597
Query: 321 ESDPWP----LISDSAKDLIRKMLCSQPSERLTAHEVLCHP 357
PWP +S +A++ I +L P++R E+ HP
Sbjct: 598 ---PWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHP 635
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 7e-14
Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
D + + +G+G +G + G + A K + I E++ E I+ L+
Sbjct: 18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID----EEIEAEYNILKALSD 73
Query: 159 HKNIVTIKGAYEDSLCVH-----IVMELCAGGELFDRI---IQRGHYSERK--AAELTRI 208
H N+V G Y + +V+ELC GG + D + ++RG E A L
Sbjct: 74 HPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEA 133
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-VGSPY 267
++G+ + H +HRD+K N LL + +K +DFG+S ++ + VG+P+
Sbjct: 134 LMGL-QHLHVNKTIHRDVKGNNILLTTEG---GVKLVDFGVSAQLTSTRLRRNTSVGTPF 189
Query: 268 YVAPEV------LLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE 321
++APEV L Y DVW+ G+ L G PP A+ ++
Sbjct: 190 WMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL-ADLHP------MRALFKIP 242
Query: 322 SDPWP------LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+P P L S+ D IRK L +R T ++L H +I
Sbjct: 243 RNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 7e-14
Identities = 68/243 (27%), Positives = 97/243 (39%), Gaps = 34/243 (13%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
RD TL R LG G FG Y +E + + S +D D E IM
Sbjct: 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMS 64
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGEL--FDRIIQ--RGHYSERKAAELTRIIV 210
H+NIV + G + L I++EL AGG+L F R + S +L
Sbjct: 65 KFN-HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCAR 123
Query: 211 GVVEACHSL---GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY 267
V + C L +HRD+ N LL K K DFG++ D+ + Y
Sbjct: 124 DVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA---------RDIYRASY 174
Query: 268 Y------------VAPEVLLKH-YGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAV 313
Y + PE L + + DVW+ GV+L+ + S G P+ T Q + + V
Sbjct: 175 YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFV 234
Query: 314 LKG 316
G
Sbjct: 235 TGG 237
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 8e-14
Identities = 51/183 (27%), Positives = 77/183 (42%), Gaps = 51/183 (27%)
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL----SVFFKPGQIFTDVVGSPYYVAP 271
CH V+HRDLKP+N L+ + + LK DFGL SV P + +++ V + +Y P
Sbjct: 119 CHQRRVLHRDLKPQNLLISERGE---LKLADFGLARAKSV---PSKTYSNEVVTLWYRPP 172
Query: 272 EVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES------D 323
+VLL Y D+W G I Y + +G P F G D + H F +
Sbjct: 173 DVLLGSTEYSTSLDMWGVGCIFYEMATGRPLF-----PGSTDVEDQLHKIFRVLGTPTEE 227
Query: 324 PWPLIS----------------------------DSAKDLIRKMLCSQPSERLTAHEVLC 355
WP +S ++L K L +P +R++A E +
Sbjct: 228 TWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287
Query: 356 HPW 358
HP+
Sbjct: 288 HPY 290
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 1e-13
Identities = 77/294 (26%), Positives = 119/294 (40%), Gaps = 54/294 (18%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMHHLAGHK 160
KLG+G + T Y GI + K+IS + E V RE ++ L H
Sbjct: 11 EKLGEGSYATVY------KGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLK-HA 63
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHS 218
NIV + + V E +L +IQ G + + +++ G+ H
Sbjct: 64 NIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRGL-AYIHG 121
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEVLL-- 275
++HRDLKP+N L+ + LK DFGL+ P Q ++ V + +Y P+VLL
Sbjct: 122 QHILHRDLKPQNLLISYLGE---LKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGA 178
Query: 276 KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF---ESDPWPLISD-- 330
Y D+W AG I +L G P F + +F+ + K D WP +S
Sbjct: 179 TDYSSALDIWGAGCIFIEMLQGQPAFPGVSD--VFEQLEKIWTVLGVPTEDTWPGVSKLP 236
Query: 331 --------------------------SAKDLIRKMLCSQPSERLTAHEVLCHPW 358
A+DL +ML P +R++A + L HP+
Sbjct: 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 2e-13
Identities = 74/282 (26%), Positives = 113/282 (40%), Gaps = 65/282 (23%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIM-HHL-AGHKNIV 163
KL G+FG + T F K I + I+ M H L + N +
Sbjct: 23 KLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNF----------NAIEPMVHQLMKDNPNFI 72
Query: 164 TIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL---G 220
+ + ++M+ G+LFD + + G SE AE+ +II +VEA + L
Sbjct: 73 KLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSE---AEVKKIIRQLVEALNDLHKHN 129
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY-------YVAPEV 273
++H D+K EN L D L D+GL ++G+P Y +PE
Sbjct: 130 IIHNDIKLENVLYDRAKDRIYL--CDYGLCK----------IIGTPSCYDGTLDYFSPEK 177
Query: 274 LLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP-------- 324
+ H Y D W GV+ Y LL+G PF K D E D
Sbjct: 178 IKGHNYDVSFDWWAVGVLTYELLTGKHPF-------------KEDEDEELDLESLLKRQQ 224
Query: 325 WPL-----ISDSAKDLIRKMLCSQPSERLTAH-EVLCHPWIC 360
L +S +A D ++ ML + RLT + E++ HP++
Sbjct: 225 KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266
|
Length = 267 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 2e-13
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 42/268 (15%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKR--KLISREDV---EDVRREIQI 152
R+ +TL RKLG G FG + E K+ + K++ +D+ +D ++E+Q
Sbjct: 5 REEFTLERKLGSGYFGEVW---------EGLWKNRVRVAIKILKSDDLLKQQDFQKEVQA 55
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHY---SERKA---AELT 206
+ L HK+++++ V+I+ EL G L + E + A L
Sbjct: 56 LKRLR-HKHLISLFAVCSVGEPVYIITELMEKGSLL-------AFLRSPEGQVLPVASLI 107
Query: 207 RIIVGVVEACHSL---GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV 263
+ V E L +HRDL N L+ +D K DFGL+ K +
Sbjct: 108 DMACQVAEGMAYLEEQNSIHRDLAARNILV---GEDLVCKVADFGLARLIKEDVYLSSDK 164
Query: 264 GSPY-YVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDF 320
PY + APE + ++DVW+ G++LY + + G P+ ++D + G+
Sbjct: 165 KIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY--- 221
Query: 321 ESDPWPL-ISDSAKDLIRKMLCSQPSER 347
P P ++ + ++P +R
Sbjct: 222 -RMPCPAKCPQEIYKIMLECWAAEPEDR 248
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 3e-13
Identities = 78/276 (28%), Positives = 112/276 (40%), Gaps = 48/276 (17%)
Query: 107 LGQGQFGTTY---LCTEIATG---IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
LG G FG Y + G I A K++ RK + ++ ++ +E +M + H
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTL--RKGATDQEKKEFLKEAHLMSNF-NHP 59
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSER------KAAELTRIIVGVVE 214
NIV + G + +I+MEL GG+L + R ER EL I + V +
Sbjct: 60 NIVKLLGVCLLNEPQYIIMELMEGGDLLSYL--RDARVERFGPPLLTLKELLDICLDVAK 117
Query: 215 ACHSLGVM---HRDLKPENFLLVNKDDDFS--LKAIDFGLSVFFKPGQIFTDVVGSPYY- 268
C L M HRDL N L+ K D +K DFGL+ D+ S YY
Sbjct: 118 GCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA---------RDIYKSDYYR 168
Query: 269 -----------VAPEVLLKH-YGPEADVWTAGVILY-ILLSGVPPFWAETQQGIFDAVLK 315
+APE LL + ++DVW+ GV+++ IL G P+ A Q + V
Sbjct: 169 KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA 228
Query: 316 GHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAH 351
G D L+ PSER T
Sbjct: 229 GG---RLQKPENCPDKIYQLMTNCWAQDPSERPTFD 261
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 4e-13
Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 37/178 (20%)
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF--FKPGQIFTDVVGSPYYVAPEVL 274
HS G++HRD+KP N LLVN + LK DFGL+ + T V + YY APE+L
Sbjct: 120 HSAGILHRDIKPGN-LLVN--SNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEIL 176
Query: 275 L--KHYGPEADVWTAGVILYILLSGVPPFWAET--QQ--GIFDAV--------------L 314
+ +HY D+W+ G I LL F A++ QQ I D +
Sbjct: 177 MGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236
Query: 315 KGHIDFESDPWP-------LISD----SAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361
+ HI P +S A L+ +ML P +R++A + L HP++ E
Sbjct: 237 RAHI-LRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 7e-13
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 41/233 (17%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
K+G+G FG Y + E A K+ R + + +E +I+ H NIV
Sbjct: 1 EKIGKGNFGDVYKGV-LKGNTEVAVKTC--RSTLPPDLKRKFLQEAEILKQYD-HPNIVK 56
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELT--RIIVGVVEAC------ 216
+ G ++IVMEL GG L + +K LT +++ ++A
Sbjct: 57 LIGVCVQKQPIYIVMELVPGGSLLT-------FLRKKKNRLTVKKLLQMSLDAAAGMEYL 109
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS---------VFFKPGQIFTDVVGSPY 267
S +HRDL N L+ ++ LK DFG+S V QI P
Sbjct: 110 ESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEEGGIYTVSDGLKQI-------PI 159
Query: 268 -YVAPEVL-LKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
+ APE L Y E+DVW+ G++L+ S G P+ + Q + + G+
Sbjct: 160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY 212
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 1e-12
Identities = 65/223 (29%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y LG +G G FG Y I T + A K + +D + RE+ IM +L H
Sbjct: 68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKV-------LQDPQYKNRELLIMKNL-NHI 119
Query: 161 NIVTIKGAY--------EDSLCVHIVMELCAGGELFDRIIQRGH----YSERKAAELTRI 208
NI+ +K Y E ++ +++VME I Q H + R L
Sbjct: 120 NIIFLKDYYYTECFKKNEKNIFLNVVMEF---------IPQTVHKYMKHYARNNHALPLF 170
Query: 209 IVGVV--EAC------HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT 260
+V + + C HS + HRDLKP+N L+ + +LK DFG + GQ
Sbjct: 171 LVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI--DPNTHTLKLCDFGSAKNLLAGQRSV 228
Query: 261 DVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPF 301
+ S +Y APE++L +Y D+W+ G I+ ++ G P F
Sbjct: 229 SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIF 271
|
Length = 440 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 2e-12
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 47/291 (16%)
Query: 106 KLGQGQFGTTYLCTEIATGIEF-ACKSISKRKLISREDVE-DVRREIQIMHHLAG--HKN 161
++G+G +G + ++ G F A K + R E + RE+ ++ HL H N
Sbjct: 8 EIGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHLETFEHPN 65
Query: 162 IVTI-------KGAYEDSLCV---HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
+V + + E L + H+ +L D++ + G +E + +++ G
Sbjct: 66 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPGVPTETIKDMMFQLLRG 122
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAP 271
+ + HS V+HRDLKP+N L+ + +K DFGL+ + T VV + +Y AP
Sbjct: 123 L-DFLHSHRVVHRDLKPQNILVTSSG---QIKLADFGLARIYSFQMALTSVVVTLWYRAP 178
Query: 272 EVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET---QQG-IFDAV-LKGHID------ 319
EVLL+ Y D+W+ G I + P F + Q G I D + L G D
Sbjct: 179 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 238
Query: 320 -----FESDPW-------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
F S I + KDL+ K L P++R++A+ L HP+
Sbjct: 239 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 2e-12
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 28/224 (12%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMHHLAGHKN 161
+LG G G + + +G+ I RKLI E +R RE+Q++H
Sbjct: 12 ELGAGNGGVVFKVSHKPSGL------IMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPY 64
Query: 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELT-RIIVGVVEACHSLG 220
IV GA+ + I ME GG L + + G E+ +++ +I G+
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 124
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV----VGSPYYVAPEVLL- 275
+MHRD+KP N L+ ++ + +K DFG+S GQ+ + VG+ Y++PE L
Sbjct: 125 IMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQG 176
Query: 276 KHYGPEADVWTAGVILYILLSG---VPPFWAETQQGIFDAVLKG 316
HY ++D+W+ G+ L + G +PP A+ + +F ++G
Sbjct: 177 THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEG 220
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-12
Identities = 69/268 (25%), Positives = 111/268 (41%), Gaps = 47/268 (17%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDV---EDVRREIQIMHHLAG 158
T ++LG GQFG +L + I+ A K I RE +D E ++M L+
Sbjct: 7 TFLKELGSGQFGVVHL-GKWRGKIDVAIKMI-------REGAMSEDDFIEEAKVMMKLS- 57
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
H N+V + G + IV E A G L + + +R + L + V EA
Sbjct: 58 HPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEY 115
Query: 219 L---GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV---APE 272
L G +HRDL N LV +D +K DFGL+ + Q +T G+ + V PE
Sbjct: 116 LESNGFIHRDLAARN-CLVG--EDNVVKVSDFGLARYVLDDQ-YTSSQGTKFPVKWAPPE 171
Query: 273 VLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330
V + ++DVW+ GV+++ + S G P+ + + ++V G+
Sbjct: 172 VFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR------------ 219
Query: 331 SAKDLIRKMLCSQPSERLTAHEVLCHPW 358
L R L + ++ W
Sbjct: 220 ----LYRPKLAPTE-----VYTIMYSCW 238
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 2e-12
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 21/228 (9%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
+DL T ++LG GQFG + + A K I + + E +E E ++M L+
Sbjct: 4 KDL-TFLKELGTGQFGVVKY-GKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMKLS 57
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA-- 215
H+ +V + G ++IV E + G L + + + G + ++L + V E
Sbjct: 58 -HEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQ--PSQLLEMCKDVCEGMA 114
Query: 216 -CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV---AP 271
S +HRDL N L+ DD +K DFGLS + + +T VGS + V P
Sbjct: 115 YLESKQFIHRDLAARNCLV---DDQGCVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPP 170
Query: 272 EVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
EVLL + ++DVW GV+++ + S G P+ + V +G
Sbjct: 171 EVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL 218
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 5e-12
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 25/230 (10%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR---EIQI 152
N ++L LG +G+G+FG L G + A K + ++D + E +
Sbjct: 4 NSKEL-KLGATIGKGEFGDVMLGD--YRGQKVAVKCL-------KDDSTAAQAFLAEASV 53
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAEL--TRIIV 210
M L H N+V + G ++IV E A G L D + RG A +L +
Sbjct: 54 MTTLR-HPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVC 112
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY-YV 269
+E +HRDL N L+ +D K DFGL+ K D P +
Sbjct: 113 EGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLA---KEASQGQDSGKLPVKWT 166
Query: 270 APEVL-LKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
APE L K + ++DVW+ G++L+ + S G P+ + + V KG+
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY 216
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 1e-11
Identities = 64/209 (30%), Positives = 94/209 (44%), Gaps = 33/209 (15%)
Query: 107 LGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNI 162
LG+G FG+ LC + TG A K K + + E + D REI+I+ L H NI
Sbjct: 12 LGKGNFGSVELCRYDPLQDNTGEVVAVK---KLQHSTAEHLRDFEREIEILKSLQ-HDNI 67
Query: 163 VTIKG-AYE-DSLCVHIVMELCAGGELFDRIIQRGHYSE-RKAAELTRIIVGVVEACHSL 219
V KG Y + +VME G L D + + + RK I +E S
Sbjct: 68 VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK 127
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLS----------VFFKPGQIFTDVVGSP-YY 268
+HRDL N L+ + + +K DFGL+ +PG+ SP ++
Sbjct: 128 RYVHRDLATRNILVES---ENRVKIGDFGLTKVLPQDKEYYKVREPGE-------SPIFW 177
Query: 269 VAPEVLLKH-YGPEADVWTAGVILYILLS 296
APE L + + +DVW+ GV+LY L +
Sbjct: 178 YAPESLTESKFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 65.5 bits (159), Expect = 2e-11
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 36/222 (16%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMHHLAGHKN 161
+LG G G +G+ A RKLI E +R RE+Q++H
Sbjct: 12 ELGAGNGGVVTKVQHKPSGLIMA------RKLIHLEIKPAIRNQIIRELQVLHE-CNSPY 64
Query: 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE-LTRIIVGVVEACHSL- 219
IV GA+ + I ME GG L D++++ ++R E L ++ + V+ L
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKE---AKRIPEEILGKVSIAVLRGLAYLR 120
Query: 220 ---GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV----VGSPYYVAPE 272
+MHRD+KP N L+ ++ + +K DFG+S GQ+ + VG+ Y++PE
Sbjct: 121 EKHQIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPE 172
Query: 273 VLL-KHYGPEADVWTAGVILYILLSG---VPPFWAETQQGIF 310
L HY ++D+W+ G+ L L G +PP A+ + IF
Sbjct: 173 RLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIF 214
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 64.7 bits (157), Expect = 2e-11
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 21/233 (9%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE-DVRREIQIMHHLAGHKNIVT 164
KLG+G + T + T A K I +L E RE+ ++ +L H NIVT
Sbjct: 12 KLGEGTYATVFKGRSKLTENLVALKEI---RLEHEEGAPCTAIREVSLLKNLK-HANIVT 67
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE--LTRIIVGVVEACHSLGVM 222
+ C+ +V E +L + G+ + + +++ G+ CH ++
Sbjct: 68 LHDIIHTERCLTLVFEYL-DSDLKQYLDNCGNLMSMHNVKIFMFQLLRGL-SYCHKRKIL 125
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGL----SVFFKPGQIFTDVVGSPYYVAPEVLL--K 276
HRDLKP+N L+ K + LK DFGL SV P + +++ V + +Y P+VLL
Sbjct: 126 HRDLKPQNLLINEKGE---LKLADFGLARAKSV---PTKTYSNEVVTLWYRPPDVLLGST 179
Query: 277 HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329
Y D+W G ILY + +G P F T + + + + WP I+
Sbjct: 180 EYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGIT 232
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 2e-11
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 105 RKLGQGQFGTTYLCTEIA----TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
R LG+G FG LC TG + A KS+ + D+++EI+I+ +L H+
Sbjct: 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HE 66
Query: 161 NIVTIKGAYEDSL--CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
NIV KG + + ++ME G L + + + + K + + V + +
Sbjct: 67 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLK--QQLKYAVQICKGMDY 124
Query: 219 LG---VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF---TDVVGSP-YYVAP 271
LG +HRDL N L+ ++ +K DFGL+ + + + D + SP ++ AP
Sbjct: 125 LGSRQYVHRDLAARNVLVESEH---QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAP 181
Query: 272 EVLL--KHYGPEADVWTAGVILYILLS 296
E L+ K Y +DVW+ GV LY LL+
Sbjct: 182 ECLIQSKFY-IASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 3e-11
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 484 QYFDKDGSGYITVDELQQACAEHN------MTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
+ DKDG GYI V+EL++ + L+E E+D+D DGRI + EF+ M
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 4e-11
Identities = 66/235 (28%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE-DVRREIQIMHHLAGHKNIVT 164
KLG+G + T + T A K I +L E RE+ ++ L H NIVT
Sbjct: 13 KLGEGTYATVFKGRSKLTENLVALKEI---RLEHEEGAPCTAIREVSLLKDLK-HANIVT 68
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQR-----GHYSERKAAE--LTRIIVGVVEACH 217
+ VH L E D+ +++ G+ + L +I+ G+ CH
Sbjct: 69 LHD------IVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLA-YCH 121
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVLL- 275
V+HRDLKP+N L+ + + LK DFGL+ P + +++ V + +Y P+VLL
Sbjct: 122 RRKVLHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLG 178
Query: 276 -KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329
Y + D+W G I + + SG P F T + + + + WP IS
Sbjct: 179 SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 5e-11
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 53/296 (17%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE-DVRREIQIMHHLAGHKNIVT 164
KLG+G + T Y T A K I +L E RE+ ++ L H NIVT
Sbjct: 13 KLGEGTYATVYKGRSKLTDNLVALKEI---RLEHEEGAPCTAIREVSLLKDLK-HANIVT 68
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQR-----GHYSERKAAEL--TRIIVGVVEACH 217
+ +H L E D+ +++ G+ +L +++ G+ CH
Sbjct: 69 LHD------IIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGL-NYCH 121
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEVLL- 275
V+HRDLKP+N L+ + + LK DFGL+ P + +++ V + +Y P++LL
Sbjct: 122 RRKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLG 178
Query: 276 -KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK--------------GHIDF 320
Y + D+W G I Y + +G P F T + + + + +F
Sbjct: 179 STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 238
Query: 321 ESDPWP-------------LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363
+S +P L SD A +L+ K+L + +R++A E + HP+ G
Sbjct: 239 KSYNYPKYRADCLHNHAPRLDSDGA-ELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 5e-11
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 105 RKLGQGQFGTTYL-CTEIA---TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
R LG+G FG L C + A TG A K++ + +++ ++EI I+ L H+
Sbjct: 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLY-HE 66
Query: 161 NIVTIKGAYEDS--LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC-- 216
NIV KG + + ++ME G L D Y + L ++++ + C
Sbjct: 67 NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRD-------YLPKHKLNLAQLLLFAQQICEG 119
Query: 217 ----HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV---GSP-YY 268
HS +HRDL N LL D+D +K DFGL+ G + V SP ++
Sbjct: 120 MAYLHSQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 176
Query: 269 VAPEVLLKH-YGPEADVWTAGVILYILLS 296
A E L ++ + +DVW+ GV LY LL+
Sbjct: 177 YAVECLKENKFSYASDVWSFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 6e-11
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS---REDVEDVRREIQIMH 154
R+ + G+ LG G FG T A ++ + L + E + E++IM
Sbjct: 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMS 93
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGV 212
HL H+NIV + GA + ++ E C G+L + + ++ + + +
Sbjct: 94 HLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKG 153
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL-------SVFFKPGQIFTDVVGS 265
+ S +HRDL N LL + +K DFGL S + G V
Sbjct: 154 MAFLASKNCIHRDLAARNVLLTHGK---IVKICDFGLARDIMNDSNYVVKGNARLPV--- 207
Query: 266 PYYVAPEVLLKH-YGPEADVWTAGVILYILLS-GVPPF 301
++APE + Y E+DVW+ G++L+ + S G P+
Sbjct: 208 -KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY 244
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 7e-11
Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 24/223 (10%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161
TLG +G+G+FG L E TG + A K+I K + ++ +E E +M L HKN
Sbjct: 9 TLGEIIGEGEFGAV-LQGEY-TGQKVAVKNI-KCDVTAQAFLE----ETAVMTKLH-HKN 60
Query: 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL-- 219
+V + G + ++IVMEL + G L + + RG +L + + V E L
Sbjct: 61 LVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALV-SVIQLLQFSLDVAEGMEYLES 118
Query: 220 -GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY-YVAPEVLLKH 277
++HRDL N L+ +D K DFGL+ + G + D P + APE LKH
Sbjct: 119 KKLVHRDLAARNILV---SEDGVAKVSDFGLA---RVGSMGVDNSKLPVKWTAPEA-LKH 171
Query: 278 --YGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
+ ++DVW+ GV+L+ + S G P+ + + + + V KG+
Sbjct: 172 KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY 214
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 7e-11
Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 47/255 (18%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSIS-KRKLI----SREDVEDVRREIQI 152
RD TLG+ LG+G FG + + + ++++ K++ + +D+ D+ E+++
Sbjct: 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 73
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI---- 208
M + HKNI+ + GA +++++E + G L + + R + ++ R+
Sbjct: 74 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQ 133
Query: 209 ------------IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256
+ +E S +HRDL N L+ + +K DFGL+
Sbjct: 134 MTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLA------ 184
Query: 257 QIFTDVVGSPYY------------VAPEVLLKH-YGPEADVWTAGVILY-ILLSGVPPFW 302
DV YY +APE L Y ++DVW+ GV+++ I G P+
Sbjct: 185 ---RDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 241
Query: 303 AETQQGIFDAVLKGH 317
+ +F + +GH
Sbjct: 242 GIPVEELFKLLKEGH 256
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 9e-11
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 16/222 (7%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161
T ++LG GQFG +L + I+ A K+I++ + ED E ++M L+ H
Sbjct: 7 TFMKELGSGQFGVVHL-GKWRAQIKVAIKAINEGAMSE----EDFIEEAKVMMKLS-HPK 60
Query: 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLG 220
+V + G ++IV E G L + + QR G S+ + + + +E
Sbjct: 61 LVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS 120
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV---APEVLL-K 276
+HRDL N L+ +K DFG++ + + +T G+ + V PEV
Sbjct: 121 FIHRDLAARNCLV---SSTGVVKVSDFGMTRYVLDDE-YTSSSGAKFPVKWSPPEVFNFS 176
Query: 277 HYGPEADVWTAGVILY-ILLSGVPPFWAETQQGIFDAVLKGH 317
Y ++DVW+ GV+++ + G PF ++ + + + +G
Sbjct: 177 KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF 218
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 9e-11
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 37/263 (14%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161
TL +++G GQFG +L + + A K+I + +S ED + E Q+M L+ H
Sbjct: 7 TLVQEIGSGQFGLVWLGYWLEKR-KVAIKTI-REGAMSEEDFIE---EAQVMMKLS-HPK 60
Query: 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRI-IQRGHYSERKAAELTRIIVGVVEACHSLG 220
+V + G + + +V E G L D + QRG +S+ + + + S
Sbjct: 61 LVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN 120
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV---APEVL-LK 276
V+HRDL N L+ ++ +K DFG++ F Q +T G+ + V +PEV
Sbjct: 121 VIHRDLAARNCLV---GENQVVKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWSSPEVFSFS 176
Query: 277 HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335
Y ++DVW+ GV+++ + S G P+ + + + + G L
Sbjct: 177 KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF----------------RL 220
Query: 336 IRKMLCSQPSERLTAHEVLCHPW 358
+ L SQ + +E++ H W
Sbjct: 221 YKPRLASQ-----SVYELMQHCW 238
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 61.8 bits (150), Expect = 1e-10
Identities = 72/252 (28%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 117 LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176
L + T F K + K SRE + + + M L HK IV+ EDS V
Sbjct: 11 LVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCL--HKYIVS-----EDS--VF 61
Query: 177 IVMELCAGGELFDRIIQRGHYSE----RKAAELTRIIVGVVEACHSLGVMHRDLKPENFL 232
+V++ GG+L+ I + + E R AAE+ V ++A H G++ RDL P N L
Sbjct: 62 LVLQHAEGGKLWSHISKFLNIPEECVKRWAAEM----VVALDALHREGIVCRDLNPNNIL 117
Query: 233 LVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEA-DVWTAGVIL 291
L DD ++ F + + V Y APEV EA D W+ G IL
Sbjct: 118 L---DDRGHIQLTYFSRWSEVED-SCDGEAV-ENMYCAPEVGGISEETEACDWWSLGAIL 172
Query: 292 YILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTA- 350
+ LL+G +T + + H W +S+ A+ L++++L P+ERL A
Sbjct: 173 FELLTG------KTLVECHPSGINTHTTLNIPEW--VSEEARSLLQQLLQFNPTERLGAG 224
Query: 351 ----HEVLCHPW 358
++ HP+
Sbjct: 225 VAGVEDIKSHPF 236
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 1e-10
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 22/222 (9%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTI 165
++G+G FG + A A KS R+ + + +E +I+ + H NIV +
Sbjct: 2 RIGRGNFGEVFSGRLRADNTPVAVKSC--RETLPPDLKAKFLQEARILKQYS-HPNIVRL 58
Query: 166 KGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII---VGVVEACHSLGVM 222
G ++IVMEL GG+ + G K EL +++ +E S +
Sbjct: 59 IGVCTQKQPIYIVMELVQGGDFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESKHCI 116
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLS------VFFKPGQIFTDVVGSPYYVAPEVL-L 275
HRDL N L+ K+ LK DFG+S V+ G + V + APE L
Sbjct: 117 HRDLAARNCLVTEKN---VLKISDFGMSREEEDGVYASTGGMKQIPVK---WTAPEALNY 170
Query: 276 KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKG 316
Y E+DVW+ G++L+ S G P+ + Q +A+ +G
Sbjct: 171 GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG 212
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 1e-10
Identities = 73/285 (25%), Positives = 119/285 (41%), Gaps = 44/285 (15%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
DL + +LG+G +G + TG A K I R ++ ++ + + ++ I
Sbjct: 1 DDLEVI-EELGRGAYGVVDKMRHVPTGTIMAVKRI--RATVNSQEQKRLLMDLDISMRSV 57
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGG--ELFDRIIQRGHYSERKAAELTRIIVGVVEA 215
VT GA V I ME+ + + ++ +G L +I V +V+A
Sbjct: 58 DCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDI--LGKIAVSIVKA 115
Query: 216 CH----SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV-----GSP 266
L V+HRD+KP N +L+N++ K DFG+S G + V G
Sbjct: 116 LEYLHSKLSVIHRDVKPSN-VLINRNGQV--KLCDFGIS-----GYLVDSVAKTIDAGCK 167
Query: 267 YYVAPEVL-----LKHYGPEADVWTAGVILYILLSGVPPF--WAETQQGIFDAVLKGHID 319
Y+APE + K Y ++DVW+ G+ + L +G P+ W Q + V
Sbjct: 168 PYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV------ 221
Query: 320 FESDPWPLI-----SDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+P P + S +D + K L ER E+L HP+
Sbjct: 222 --EEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFF 264
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 61.8 bits (150), Expect = 1e-10
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED---VEDVRREIQIMHHLAG 158
T+ KLG GQ+G Y + A K++ +ED VE+ +E +M +
Sbjct: 9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-------KEDTMEVEEFLKEAAVMKEIK- 60
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAEL----TRIIVGVVE 214
H N+V + G +I+ E G L D ++ + E A L T+I +E
Sbjct: 61 HPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSA-ME 118
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY---YVAP 271
+HRDL N L+ ++ +K DFGLS G +T G+ + + AP
Sbjct: 119 YLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 174
Query: 272 EVL-LKHYGPEADVWTAGVILY-ILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329
E L + ++DVW GV+L+ I G+ P+ +++ + KG + +
Sbjct: 175 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG---YRMERPEGCP 231
Query: 330 DSAKDLIRKMLCSQPSERLTAHEV 353
+L+R PS+R + E+
Sbjct: 232 PKVYELMRACWQWNPSDRPSFAEI 255
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 2e-10
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 50/247 (20%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDV---EDVRREIQIMHHLAGHKNIV 163
LG+G FG Y + S++ + L + ++ R+E ++M L H NIV
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ-HPNIV 71
Query: 164 TIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAA-------------ELTRIIV 210
+ G ++ E A G+L + +++ +S+ A + I +
Sbjct: 72 CLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI 131
Query: 211 GVVEACHSLG---VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY 267
+ L +HRDL N LV + ++K DFGLS D+ + Y
Sbjct: 132 QIAAGMEYLSSHHFVHRDLAARN-CLVG--EGLTVKISDFGLS---------RDIYSADY 179
Query: 268 Y------------VAPEVLLKHYG---PEADVWTAGVILYILLS-GVPPFWAETQQGIFD 311
Y + PE +L YG E+D+W+ GV+L+ + S G+ P++ + Q + +
Sbjct: 180 YRVQSKSLLPVRWMPPEAIL--YGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIE 237
Query: 312 AVLKGHI 318
+ +
Sbjct: 238 MIRSRQL 244
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 6e-10
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 145 DVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR--GHYSERKA 202
D E IM H NI+ ++G S V IV E G L D +++ G ++ +
Sbjct: 51 DFLSEASIMGQF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DAFLRKHDGQFTVIQL 108
Query: 203 AELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK--PGQIFT 260
+ R I ++ +G +HRDL N +LVN + K DFGLS + P +T
Sbjct: 109 VGMLRGIASGMKYLSDMGYVHRDLAARN-ILVNS--NLVCKVSDFGLSRVLEDDPEAAYT 165
Query: 261 DVVGS-PY-YVAPEVL-LKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKG 316
G P + APE + + + +DVW+ G++++ ++S G P+W + Q + A+ +G
Sbjct: 166 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG 225
Query: 317 H 317
+
Sbjct: 226 Y 226
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 6e-10
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 19/227 (8%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATG---IEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
T+ + +G G+FG G I+ A K++ + S + D E IM
Sbjct: 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTL--KAGSSDKQRLDFLTEASIMGQFD- 63
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
H NI+ ++G S V I+ E G L D+ + R + + +L ++ G+
Sbjct: 64 HPNIIRLEGVVTKSRPVMIITEYMENGSL-DKFL-RENDGKFTVGQLVGMLRGIASGMKY 121
Query: 219 LGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG--SPY-YVAPE 272
L M HRDL N +LVN + K DFGLS + + G P + APE
Sbjct: 122 LSEMNYVHRDLAARN-ILVNSN--LVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPE 178
Query: 273 VL-LKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
+ + + +DVW+ G++++ ++S G P+W + Q + AV G+
Sbjct: 179 AIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY 225
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 8e-10
Identities = 79/287 (27%), Positives = 126/287 (43%), Gaps = 47/287 (16%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
DL LG ++G+G FGT +G A K I R + ++ + + ++ ++ +
Sbjct: 5 DLKDLG-EIGRGAFGTVNKMLHKPSGTIMAVKRI--RSTVDEKEQKRLLMDLDVVMRSSD 61
Query: 159 HKNIVTIKGA-YEDSLCVHIVMELCAGG-ELFDRII---QRGHYSERKAAELTRIIVGVV 213
IV GA + + C I MEL + F + + + E L +I V V
Sbjct: 62 CPYIVKFYGALFREGDCW-ICMELMDISLDKFYKYVYEVLKSVIPEEI---LGKIAVATV 117
Query: 214 EACH----SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-----VG 264
+A + L ++HRD+KP N LL D + ++K DFG+S GQ+ + G
Sbjct: 118 KALNYLKEELKIIHRDVKPSNILL---DRNGNIKLCDFGIS-----GQLVDSIAKTRDAG 169
Query: 265 SPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPF--WAETQQGIFD---AVLK 315
Y+APE + Y +DVW+ G+ LY + +G P+ W +FD V+K
Sbjct: 170 CRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQLTQVVK 225
Query: 316 GHID---FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
G D + S S + I L S+R E+L HP+I
Sbjct: 226 G--DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFI 270
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 8e-10
Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 47/255 (18%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSIS-KRKLI----SREDVEDVRREIQI 152
R TLG+ LG+G FG + I + K ++ K++ + +D+ D+ E+++
Sbjct: 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEM 70
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI---- 208
M + HKNI+ + GA +++++E + G L + + R + + ++
Sbjct: 71 MKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQ 130
Query: 209 ------------IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256
+ +E S +HRDL N L+ +D +K DFGL+
Sbjct: 131 LTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT---EDNVMKIADFGLA------ 181
Query: 257 QIFTDVVGSPYY------------VAPEVLLKH-YGPEADVWTAGVILY-ILLSGVPPFW 302
DV YY +APE L Y ++DVW+ GV+L+ I G P+
Sbjct: 182 ---RDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238
Query: 303 AETQQGIFDAVLKGH 317
+ +F + +GH
Sbjct: 239 GIPVEELFKLLKEGH 253
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 1e-09
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 482 AFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
AF FDKDG G IT EL N T+ L+D+I EVD D +G ID+ EF+ +M +
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMAR 75
|
Length = 149 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 21/229 (9%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS-REDVEDVRREIQIMHHL 156
R L RKLG GQFG E+ G+ ++ + L D +D E QIM L
Sbjct: 5 RTSIQLLRKLGAGQFG------EVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKL 58
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
H ++ + ++IV EL G L + +Q G K +L + V
Sbjct: 59 R-HPKLIQLYAVCTLEEPIYIVTELMKYGSLLE-YLQGGAGRALKLPQLIDMAAQVASGM 116
Query: 217 HSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY---YVA 270
L HRDL N +LV ++ K DFGL+ K I+ G+ + + A
Sbjct: 117 AYLEAQNYIHRDLAARN-VLVG--ENNICKVADFGLARVIKE-DIYEAREGAKFPIKWTA 172
Query: 271 PE-VLLKHYGPEADVWTAGVILY-ILLSGVPPFWAETQQGIFDAVLKGH 317
PE L + ++DVW+ G++L I+ G P+ T + V +G+
Sbjct: 173 PEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY 221
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 47/255 (18%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACK--SISKRKLIS---REDVEDVRREIQI 152
RD LG+ LG+G FG + I E + ++ + L S +D+ D+ E+++
Sbjct: 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 76
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR----------------GH 196
M + HKNI+ + GA +++++E + G L + + R
Sbjct: 77 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQ 136
Query: 197 YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256
S + + +E S +HRDL N L+ +D +K DFGL+
Sbjct: 137 LSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLA------ 187
Query: 257 QIFTDVVGSPYY------------VAPEVLLKH-YGPEADVWTAGVILY-ILLSGVPPFW 302
D+ YY +APE L Y ++DVW+ GV+L+ I G P+
Sbjct: 188 ---RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244
Query: 303 AETQQGIFDAVLKGH 317
+ +F + +GH
Sbjct: 245 GVPVEELFKLLKEGH 259
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 32/263 (12%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG G++ ++ S D D E++++ L H NI+ +
Sbjct: 10 IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLL 69
Query: 167 GAYEDSLCVHIVMELCAGGELFD-----RII--------QRGHYSERKAAELTRIIVGVV 213
GA E+ ++I +E G L D R++ + G S + +L + V
Sbjct: 70 GACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVA 129
Query: 214 EACHSLG---VMHRDLKPENFLLVNKDDDFSLKAIDFGLS----VFFKPGQIFTDVVGSP 266
L +HRDL N L+ ++ + K DFGLS V+ K V
Sbjct: 130 TGMQYLSEKQFIHRDLAARNVLV---GENLASKIADFGLSRGEEVYVKKTMGRLPV---- 182
Query: 267 YYVAPEVL-LKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDP 324
++A E L Y ++DVW+ GV+L+ ++S G P+ T +++ + +G + +
Sbjct: 183 RWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRMEK 239
Query: 325 WPLISDSAKDLIRKMLCSQPSER 347
D +L+R+ +P ER
Sbjct: 240 PRNCDDEVYELMRQCWRDRPYER 262
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 3e-09
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + + + +G FG YL + +A K + K +I++ V V+ E LA K
Sbjct: 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAE---RDALALSK 62
Query: 161 N--IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
+ IV + + + + V++VME GG++ + G++ E A + + ++ H
Sbjct: 63 SPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHR 122
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250
G++HRDLKP+N L+ N+ +K DFGLS
Sbjct: 123 HGIIHRDLKPDNMLISNEG---HIKLTDFGLS 151
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L RKLG GQFG ++ T T + A K++ + E +E QIM L
Sbjct: 5 RESLKLERKLGAGQFGEVWMGTWNGT-TKVAVKTLKPGTM----SPEAFLQEAQIMKKLR 59
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA-- 215
H +V + + ++IV E + G L D ++ G + + +L + + E
Sbjct: 60 -HDKLVQLYAVCSEEEPIYIVTEYMSKGSLLD-FLKSGEGKKLRLPQLVDMAAQIAEGMA 117
Query: 216 -CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY---YVAP 271
S +HRDL N L+ ++ K DFGL+ + +T G+ + + AP
Sbjct: 118 YLESRNYIHRDLAARNILV---GENLVCKIADFGLARLIED-DEYTAREGAKFPIKWTAP 173
Query: 272 EVLLKHYGP---EADVWTAGVILY 292
E YG ++DVW+ G++L
Sbjct: 174 EAAN--YGRFTIKSDVWSFGILLT 195
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 4e-09
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 98 RDLYTLGRKLGQGQFGTTYL--CTEIATGIEFACKSISKRKLISREDV-EDVRREIQIMH 154
RD L R+LG+G FG +L C + + ++ K + D +D RE +++
Sbjct: 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLT 63
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGEL----------FDRIIQR----GHYSER 200
+ H+NIV G + +V E G+L + G +
Sbjct: 64 NF-QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS 122
Query: 201 KAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT 260
+ ++ I + S +HRDL N L+ D +K DFG+S
Sbjct: 123 QLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GYDLVVKIGDFGMS---------R 170
Query: 261 DVVGSPYY------------VAPE-VLLKHYGPEADVWTAGVILY 292
DV + YY + PE ++ + + E+DVW+ GV+L+
Sbjct: 171 DVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLW 215
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 8e-09
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 29/224 (12%)
Query: 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH 159
L +G+ T A K I+ S+ED++ +++EI L H
Sbjct: 3 LTLIGKCFEDLMIVHLAKHK--PTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQ-H 58
Query: 160 KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTR-IIVGVVEA--- 215
NI+ ++ +++V L A G D + + H+ E I+ V+ A
Sbjct: 59 PNILPYVTSFIVDSELYVVSPLMAYGSCEDLL--KTHFPEGLPELAIAFILKDVLNALDY 116
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV---FFKPGQIFTDVVGSP------ 266
HS G +HR +K + LL K + GL K G+ V P
Sbjct: 117 IHSKGFIHRSVKASHILL-----SGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKN 171
Query: 267 -YYVAPEVL---LKHYGPEADVWTAGVILYILLSGVPPFWAETQ 306
+++PEVL L+ Y ++D+++ G+ L +G PF +
Sbjct: 172 LPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPF-KDMP 214
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 1e-08
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 42/231 (18%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI-------MHHLAGH 159
LG+G FG + T + A K+ ED+ +E++I + H
Sbjct: 3 LGKGNFGEVFKGT-LKDKTPVAVKTCK----------EDLPQELKIKFLSEARILKQYDH 51
Query: 160 KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA---C 216
NIV + G ++IVMEL GG+ + R E K +L + +
Sbjct: 52 PNIVKLIGVCTQRQPIYIVMELVPGGDFLSFL--RKKKDELKTKQLVKFALDAAAGMAYL 109
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS------VFFKPG--QIFTDVVGSPYY 268
S +HRDL N L+ ++ LK DFG+S ++ G QI +
Sbjct: 110 ESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK------W 160
Query: 269 VAPEVL-LKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
APE L Y E+DVW+ G++L+ S GV P+ T Q + V KG+
Sbjct: 161 TAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY 211
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 1e-08
Identities = 77/303 (25%), Positives = 117/303 (38%), Gaps = 54/303 (17%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE-DVRREIQIMHHLA 157
D Y KLG+G + T Y G A K I +L E RE ++ L
Sbjct: 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVI---RLQEEEGTPFTAIREASLLKGLK 61
Query: 158 GHKNIVTIKGAYEDSLCVHIVME-----LCAGGELFDRIIQRGHYSERKAAELTRIIVGV 212
H NIV + + +V E LC + D+ G + E L +++ G+
Sbjct: 62 -HANIVLLHDIIHTKETLTLVFEYVHTDLC---QYMDKH-PGGLHPENVKLFLFQLLRGL 116
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAP 271
H ++HRDLKP+N L+ D LK DFGL+ P +++ V + +Y P
Sbjct: 117 -SYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPP 172
Query: 272 EVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF---ESDPWP 326
+VLL Y D+W G I ++ GV F + I D + + + D WP
Sbjct: 173 DVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAF--PGMKDIQDQLERIFLVLGTPNEDTWP 230
Query: 327 LIS----------------------------DSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
+ + A+DL K+L P RL+A L H +
Sbjct: 231 GVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEY 290
Query: 359 ICE 361
+
Sbjct: 291 FSD 293
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 2e-08
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDN 454
+ E EEI + F+ D D +G I+ LK + G T+ D E+++++D AD +
Sbjct: 83 LGERDPREEI---LKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNG 139
Query: 455 SGTIDYGEFI 464
G I EF
Sbjct: 140 DGEISEEEFY 149
|
Length = 158 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 2e-08
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 412 KAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA----ADVDNSGTIDYGEFIAA 466
K +D D G I +EL+ L+ G L D E+ +L++A D D G I + EF+ A
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEA 59
|
Length = 60 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 2e-08
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 25/261 (9%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L KLGQG FG ++ T T + A K++ ++ E +E QIM L
Sbjct: 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMP----EAFLQEAQIMKKLR 59
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA-- 215
H +V + + ++IV E G L D ++ G K +L + + +
Sbjct: 60 -HDKLVPLYAVVSEE-PIYIVTEFMGKGSLLD-FLKEGDGKYLKLPQLVDMAAQIADGMA 116
Query: 216 -CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY---YVAP 271
+ +HRDL+ N L+ D+ K DFGL+ + + +T G+ + + AP
Sbjct: 117 YIERMNYIHRDLRAANILVG---DNLVCKIADFGLARLIEDNE-YTARQGAKFPIKWTAP 172
Query: 272 E-VLLKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL-I 328
E L + ++DVW+ G++L L++ G P+ + + + V +G+ P P
Sbjct: 173 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY----RMPCPQGC 228
Query: 329 SDSAKDLIRKMLCSQPSERLT 349
+S +L++ P ER T
Sbjct: 229 PESLHELMKLCWKKDPDERPT 249
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 2e-08
Identities = 59/215 (27%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 106 KLGQGQFGTTYLCTEIATG---IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNI 162
KLG G FG +G I A K + KL + ++D +E IMH L H+N+
Sbjct: 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL--SDIMDDFLKEAAIMHSLD-HENL 58
Query: 163 VTIKGAYEDSLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLG 220
+ + G + +V EL G L DR+ + GH+ + I + S
Sbjct: 59 IRLYGVVLTH-PLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR 117
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV----------- 269
+HRDL N LL + D +K DFGL +YV
Sbjct: 118 FIHRDLAARNILLASDD---KVKIGDFGLMRALP--------QNEDHYVMEEHLKVPFAW 166
Query: 270 -APEVLLK-HYGPEADVWTAGVILYILLS-GVPPF 301
APE L + +DVW GV L+ + + G P+
Sbjct: 167 CAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPW 201
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 2e-08
Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS-----REDVEDVRR-----EIQ 151
+ R LG G+FG E+ G K SKR+L R D +R E
Sbjct: 8 KIERILGTGRFG------ELCRG---CLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEAL 58
Query: 152 IMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
+ H NIV ++G + IV E + G L D +++ H + A +L ++ G
Sbjct: 59 TLGQF-DHSNIVRLEGVITRGNTMMIVTEYMSNGAL-DSFLRK-HEGQLVAGQLMGMLPG 115
Query: 212 VVEACHSL---GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG-SP- 266
+ L G +H+ L +LVN D K F K I+T + G SP
Sbjct: 116 LASGMKYLSEMGYVHKGLAAHK-VLVNSD--LVCKISGFRRLQEDKSEAIYTTMSGKSPV 172
Query: 267 YYVAPEVL-LKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKG 316
+ APE + H+ +DVW+ G++++ ++S G P+W + Q + AV G
Sbjct: 173 LWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG 224
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 50.2 bits (121), Expect = 2e-08
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 419 SGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470
G IT +ELK L G +L + E+ L D D G I + EF L
Sbjct: 2 KGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQRL 53
|
Length = 53 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 2e-08
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 40/231 (17%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGI---------EFACKSISKRKLISREDV----- 143
R L KLG+GQFG +LC A G+ EF + + + R DV
Sbjct: 4 RQQLRLKEKLGEGQFGEVHLCE--AEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTAR 61
Query: 144 EDVRREIQIMHHLAGHKNIVTIKG--AYEDSLCVHIVMELCAGGELFDRIIQRGHYSERK 201
D +EI+IM L + NI+ + G +D LC ++ E G+L + QR S
Sbjct: 62 NDFLKEIKIMSRLK-NPNIIRLLGVCVSDDPLC--MITEYMENGDLNQFLSQREIESTFT 118
Query: 202 AAE------------LTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249
A + I ++ SL +HRDL N L+ + +++K DFG+
Sbjct: 119 HANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV---GNHYTIKIADFGM 175
Query: 250 SVFFKPGQIF----TDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLS 296
S G + V+ + +LL + +DVW GV L+ + +
Sbjct: 176 SRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 3e-08
Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 48/285 (16%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL---ISREDVEDVRREIQIMH 154
RD TLG+ LG+G FG + +++ + L + +D+ D+ E+++M
Sbjct: 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMK 70
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG--- 211
+ HKNI+ + G +++V+E A G L D + R E + + R
Sbjct: 71 MIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLT 130
Query: 212 ---VVEACH----------SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258
+V + S +HRDL N L+ +D +K DFGL+
Sbjct: 131 QKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT---EDHVMKIADFGLA-------- 179
Query: 259 FTDVVGSPYY------------VAPEVLLKH-YGPEADVWTAGVILY-ILLSGVPPFWAE 304
D+ YY +APE L Y ++DVW+ GV+L+ I G P+
Sbjct: 180 -RDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 238
Query: 305 TQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLT 349
+ +F + +G+ + + L+R PS+R T
Sbjct: 239 PVEELFKLLKEGY---RMEKPQNCTQELYHLMRDCWHEVPSQRPT 280
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 68/290 (23%), Positives = 117/290 (40%), Gaps = 55/290 (18%)
Query: 98 RDLYTLGRKLGQGQFGTTYL-----CTEIATGIEFACKSISKRKLISREDVEDVRREIQI 152
R+ TL R+LGQG FG Y + A K++++ + + + E +
Sbjct: 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMR--ERIEFLNEASV 62
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE------LT 206
M H ++V + G +VMEL A G+L + R E + L
Sbjct: 63 MKEFNCH-HVVRLLGVVSTGQPTLVVMELMAKGDLKSYL--RSRRPEAENNPGLGPPTLQ 119
Query: 207 RIIVGVVEAC------HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT 260
+ I E + +HRDL N +V +D ++K DFG++
Sbjct: 120 KFIQMAAEIADGMAYLAAKKFVHRDLAARN-CMVA--EDLTVKIGDFGMT---------R 167
Query: 261 DVVGSPYY------------VAPEVLLK-HYGPEADVWTAGVILY-ILLSGVPPFWAETQ 306
D+ + YY +APE L + ++DVW+ GV+L+ + P+ +
Sbjct: 168 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN 227
Query: 307 QGIFDAVLKG-HIDF-ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL 354
+ + V+ G H+D E+ P L+ +L+R P R T E++
Sbjct: 228 EEVLKFVIDGGHLDLPENCPDKLL-----ELMRMCWQYNPKMRPTFLEIV 272
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 4e-08
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 41/269 (15%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L +KLG GQFG ++ T + A K++ K +S E + E QIM L
Sbjct: 5 RESLQLIKKLGNGQFGEVWMGTWNGN-TKVAVKTL-KPGTMSPESFLE---EAQIMKKLR 59
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA-- 215
H +V + + ++IV E + G L D ++ G K L + V
Sbjct: 60 -HDKLVQLYAVVSEE-PIYIVTEYMSKGSLLD-FLKDGEGRALKLPNLVDMAAQVAAGMA 116
Query: 216 -CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY---YVAP 271
+ +HRDL+ N L+ D K DFGL+ + + +T G+ + + AP
Sbjct: 117 YIERMNYIHRDLRSANILV---GDGLVCKIADFGLARLIEDNE-YTARQGAKFPIKWTAP 172
Query: 272 E-VLLKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329
E L + ++DVW+ G++L L++ G P+ + + + V +G+
Sbjct: 173 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY------------ 220
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
+M C Q ++ HE++ W
Sbjct: 221 --------RMPCPQDCP-ISLHELMLQCW 240
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 5e-08
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
N+++L L + +G+G+FG L G + A K I K ++ + E +M
Sbjct: 4 NMKEL-KLLQTIGKGEFGDVMLGDY--RGNKVAVKCI-KNDATAQAFLA----EASVMTQ 55
Query: 156 LAGHKNIVTIKGA-YEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
L H N+V + G E+ ++IV E A G L D + RG S L + + V E
Sbjct: 56 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCE 113
Query: 215 ACHSL---GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY-YVA 270
A L +HRDL N L+ +D K DFGL+ K D P + A
Sbjct: 114 AMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTA 167
Query: 271 PEVLL-KHYGPEADVWTAGVILYILLS 296
PE L K + ++DVW+ G++L+ + S
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYS 194
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 5e-08
Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 45/271 (16%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L KLGQG FG ++ T T A K++ + E +E Q+M L
Sbjct: 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLR 59
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSER----KAAELTRIIVGVV 213
H+ +V + + ++IV E + G L D + +G + + ++ I +
Sbjct: 60 -HEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGM 115
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY---YVA 270
+ +HRDL+ N L+ ++ K DFGL+ + + +T G+ + + A
Sbjct: 116 AYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTA 171
Query: 271 PE-VLLKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328
PE L + ++DVW+ G++L L + G P+ + + D V +G+
Sbjct: 172 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----------- 220
Query: 329 SDSAKDLIRKMLCSQPSE-RLTAHEVLCHPW 358
+M C P E + H+++C W
Sbjct: 221 ---------RMPC--PPECPESLHDLMCQCW 240
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 7e-08
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 104 GRKLGQGQFGTTYLC--TEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161
G K+G+G +G Y + E+A K I + REI ++ L H N
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELK-HPN 59
Query: 162 IVTIKGAY--EDSLCVHIVMELCAGGELFDRI-IQRGHYSERKAAELTRIIVG-----VV 213
++ ++ + V ++ + A +L+ I R + +K +L R +V ++
Sbjct: 60 VIALQKVFLSHSDRKVWLLFDY-AEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQIL 118
Query: 214 EACHSLG---VMHRDLKPENFLLVNKDDDFS-LKAIDFGLSVFF----KPGQIFTDVVGS 265
+ H L V+HRDLKP N L++ + + +K D G + F KP VV +
Sbjct: 119 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT 178
Query: 266 PYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPF 301
+Y APE+LL +HY D+W G I LL+ P F
Sbjct: 179 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 8e-08
Identities = 66/271 (24%), Positives = 113/271 (41%), Gaps = 34/271 (12%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG G+ ++ S++D D E++++ L H NI+ +
Sbjct: 15 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 74
Query: 167 GAYEDSLCVHIVMELCAGGELFDRI-------------IQRGHYSERKAAELTRIIVGVV 213
GA E +++ +E G L D + I S + +L V
Sbjct: 75 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 134
Query: 214 EACHSLG---VMHRDLKPENFLLVNKDDDFSLKAIDFGLS----VFFKPGQIFTDVVGSP 266
L +HRDL N L+ +++ K DFGLS V+ K V
Sbjct: 135 RGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVKKTMGRLPV---- 187
Query: 267 YYVAPEVL-LKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDP 324
++A E L Y +DVW+ GV+L+ ++S G P+ T +++ + +G+ E
Sbjct: 188 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RLEK-- 244
Query: 325 WPL-ISDSAKDLIRKMLCSQPSERLTAHEVL 354
PL D DL+R+ +P ER + ++L
Sbjct: 245 -PLNCDDEVYDLMRQCWREKPYERPSFAQIL 274
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.2 bits (127), Expect = 1e-07
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 32/263 (12%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG G+ ++ S++D D E++++ L H NI+ +
Sbjct: 3 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62
Query: 167 GAYEDSLCVHIVMELCAGGELFD-----RII--------QRGHYSERKAAELTRIIVGVV 213
GA E +++ +E G L D R++ S + +L V
Sbjct: 63 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 122
Query: 214 EACHSLG---VMHRDLKPENFLLVNKDDDFSLKAIDFGLS----VFFKPGQIFTDVVGSP 266
L +HRDL N L+ +++ K DFGLS V+ K V
Sbjct: 123 RGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVKKTMGRLPV---- 175
Query: 267 YYVAPEVL-LKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDP 324
++A E L Y +DVW+ GV+L+ ++S G P+ T +++ + +G + +
Sbjct: 176 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEK 232
Query: 325 WPLISDSAKDLIRKMLCSQPSER 347
D DL+R+ +P ER
Sbjct: 233 PLNCDDEVYDLMRQCWREKPYER 255
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 1e-07
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 148 REIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQ--RGHYSERKAAEL 205
REI ++ L H N+++++ + + + II+ R + +K +L
Sbjct: 47 REIALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQL 105
Query: 206 TR-----IIVGVVEACHSLG---VMHRDLKPENFLLVNKDDDFS-LKAIDFGLSVFF--- 253
R ++ +++ H L V+HRDLKP N L++ + + +K D G + F
Sbjct: 106 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165
Query: 254 -KPGQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPF 301
KP VV + +Y APE+LL +HY D+W G I LL+ P F
Sbjct: 166 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-07
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 448 DAADVDNSGTIDYGEFIAATVHLN----KLEREEHLVAAFQYFDKDGSGYITVDELQQAC 503
D D G ID E L E EE + A F DKDG G I+ +E +A
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 3e-07
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 385 NKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT--- 441
N+L K+ LR + + SE EI ++F+ +D N + F E L LK
Sbjct: 40 NELGKI-LRSLGFNPSEAEIN---KLFEEIDAGN-ETVDFPEF---LTVMSVKLKRGDKE 91
Query: 442 -EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
E+R+ D D+ G I GE L + +E + + +D+DG G I +E +
Sbjct: 92 EELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFK 151
Query: 501 QACA 504
+
Sbjct: 152 KLIK 155
|
Length = 160 |
| >gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 3e-07
Identities = 89/407 (21%), Positives = 160/407 (39%), Gaps = 76/407 (18%)
Query: 20 PEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMR 79
+N+++R+ + + ST S ++ +K+ + ++P K +
Sbjct: 44 TSRSTNSARRSGSKRDRETATSTDSGRTKSHEGAATTKQATTTPTTNVEVAPPPKKKKVT 103
Query: 80 RGIDNQT------YYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSIS 133
+ NQ+ Y VLG D + + LG+G FG + A K +
Sbjct: 104 YALPNQSREEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVR 163
Query: 134 KRKLISREDVEDVRREIQIMHHL-----AGHKNIVTIKGAYE-DSLCVHIVMELCAGGEL 187
+R D + EIQ M + A ++ I+ ++ ++ + IVM G L
Sbjct: 164 NVPKYTR----DAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPK-YGPCL 218
Query: 188 FDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKD--------- 237
D I++ G +S R A++ ++ H+ L +MH DLKPEN L+ D
Sbjct: 219 LDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNR 278
Query: 238 ----DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILY 292
D ++ D G + + T +V + +Y +PEV+L + D+W+ G I+Y
Sbjct: 279 ALPPDPCRVRICDLGGCCDERHSR--TAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIY 336
Query: 293 ILLSG----------------------VPPFWA-----ETQQGIFDAVLKGHIDFESDPW 325
L +G +P WA E + ++++ G + +DP
Sbjct: 337 ELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSA--GQLRPCTDPK 394
Query: 326 PL------------ISDSAK-DLIRKMLCSQPSERLTAHEVLCHPWI 359
L I D DLI +L +RL A ++ HP++
Sbjct: 395 HLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441
|
Length = 467 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 3e-07
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 55/259 (21%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIE---------FACKSISKRKLISREDVEDVRR 148
RD LG+ LG+G FG A GI+ A K + + +D+ D+
Sbjct: 11 RDRLVLGKPLGEGCFGQVVRAE--AYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLIS 66
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI 208
E+++M + HKNI+ + G +++++E A G L + + R ++T++
Sbjct: 67 EMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKV 126
Query: 209 ----------------IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252
+ +E S +HRDL N +LV +D+ +K DFGL+
Sbjct: 127 PEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN-VLVTEDN--VMKIADFGLA-- 181
Query: 253 FKPGQIFTDVVGSPYY------------VAPEVLLKH-YGPEADVWTAGVILY-ILLSGV 298
V YY +APE L Y ++DVW+ G++++ I G
Sbjct: 182 -------RGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGG 234
Query: 299 PPFWAETQQGIFDAVLKGH 317
P+ + +F + +GH
Sbjct: 235 SPYPGIPVEELFKLLREGH 253
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 5e-07
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 54/257 (21%)
Query: 98 RDLYTLGRKLGQGQFGTTYL--CTEIATGIE---FACKSISKRKLISREDVEDVRREIQI 152
RD+ L R+LG+G FG +L C ++ + A K++ L +R+D + RE ++
Sbjct: 5 RDI-VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQ---REAEL 60
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELF--------DRIIQRGHYSERKAAE 204
+ +L H++IV G D + +V E G+L D +I + E
Sbjct: 61 LTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 119
Query: 205 L---------TRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255
L ++I G+V S +HRDL N L+ + +K DFG+S
Sbjct: 120 LGLSQMLHIASQIASGMVYLA-SQHFVHRDLATRNCLVGA---NLLVKIGDFGMS----- 170
Query: 256 GQIFTDVVGSPYY------------VAPE-VLLKHYGPEADVWTAGVILY-ILLSGVPPF 301
DV + YY + PE ++ + + E+DVW+ GVIL+ I G P+
Sbjct: 171 ----RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW 226
Query: 302 WAETQQGIFDAVLKGHI 318
+ + + + + +G +
Sbjct: 227 FQLSNTEVIECITQGRV 243
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 6e-07
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 203 AELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK---PGQIF 259
+ R ++ ++ H G++HRD+K EN +LVN +D L DFG + F +
Sbjct: 263 TAVARQLLSAIDYIHGEGIIHRDIKTEN-VLVNGPEDICLG--DFGAACFARGSWSTPFH 319
Query: 260 TDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILY 292
+ G+ APEVL Y P D+W+AG++++
Sbjct: 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIF 353
|
Length = 461 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 7e-07
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 51/253 (20%)
Query: 98 RDLYTLGRKLGQGQFGTTYL--CTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
RD+ L +LG+G FG +L C + + ++ K S +D +RE +++
Sbjct: 5 RDI-VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTV 63
Query: 156 LAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE----------- 204
L H++IV G + + +V E G+L +R + R H + K
Sbjct: 64 LQ-HQHIVRFYGVCTEGRPLLMVFEYMRHGDL-NRFL-RSHGPDAKILAGGEDVAPGQLT 120
Query: 205 -------LTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257
++I G+V SL +HRDL N L+ +K DFG+S
Sbjct: 121 LGQMLAIASQIASGMVYLA-SLHFVHRDLATRNCLV---GQGLVVKIGDFGMS------- 169
Query: 258 IFTDVVGSPYY------------VAPE-VLLKHYGPEADVWTAGVILY-ILLSGVPPFWA 303
D+ + YY + PE +L + + E+D+W+ GV+L+ I G P++
Sbjct: 170 --RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQ 227
Query: 304 ETQQGIFDAVLKG 316
+ + + +G
Sbjct: 228 LSNTEAIECITQG 240
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 1e-06
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 490 GSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
G IT +EL++A A ++++ ++ + RE D D DG+I + EF ++Q+
Sbjct: 1 EKGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQR 52
|
Length = 53 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK 276
H+ ++HRD+K EN + +D + D G + F F + G+ APEVL +
Sbjct: 174 HAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLAR 230
Query: 277 -HYGPEADVWTAGVILYILLS 296
Y +AD+W+AG++L+ +L+
Sbjct: 231 DKYNSKADIWSAGIVLFEMLA 251
|
Length = 357 |
| >gnl|CDD|197477 smart00027, EH, Eps15 homology domain | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 1e-06
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
+S E+ A +++F+++D + G +T + K L + S L T + + + AD+DN G +
Sbjct: 4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLK--SGLPQTLLAKIWNLADIDNDGEL 61
Query: 459 DYGEFIAATVHLNKL 473
D EF A +HL
Sbjct: 62 DKDEFALA-MHLIYR 75
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. Length = 96 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 1e-06
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 21/229 (9%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L +KLG GQFG ++ + A K++ + V+ E +M L
Sbjct: 5 RESIKLVKKLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQ 59
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFD--RIIQRGHYSERKAAELTRIIVGVVEA 215
H +V + ++I+ E A G L D + + G K + + I +
Sbjct: 60 -HDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY 118
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY---YVAPE 272
+HRDL+ N L+ + K DFGL+ + + +T G+ + + APE
Sbjct: 119 IERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPE 174
Query: 273 VLLKHYGP---EADVWTAGVILY-ILLSGVPPFWAETQQGIFDAVLKGH 317
+ ++G ++DVW+ G++LY I+ G P+ + + A+ +G+
Sbjct: 175 AI--NFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY 221
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 1e-06
Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 63/292 (21%)
Query: 105 RKLGQGQFGTTYLCTEIATGI----EFACKSISKRKLISREDVE-DVRREIQIMHHLAGH 159
R +GQG FG + A G+ F ++ K + D++ D +RE +M H
Sbjct: 11 RDIGQGAFGRVFQAR--APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DH 67
Query: 160 KNIVTIKG--AYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG------ 211
NIV + G A +C ++ E A G+L + + R ++ + T
Sbjct: 68 PNIVKLLGVCAVGKPMC--LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPL 125
Query: 212 ----VVEACHSLGV------------MHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255
+ C + V +HRDL N L+ ++ +K DFGLS
Sbjct: 126 PLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLS----- 177
Query: 256 GQIFTDVVGSPYYVAPE-------------VLLKHYGPEADVWTAGVILYILLS-GVPPF 301
++ + YY A E + Y E+DVW GV+L+ + S G+ P+
Sbjct: 178 ----RNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPY 233
Query: 302 WAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEV 353
+ + + V G++ D PL +L+R PS+R + +
Sbjct: 234 YGMAHEEVIYYVRDGNVLSCPDNCPL---ELYNLMRLCWSKLPSDRPSFASI 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 2e-06
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 101 YTLGRKLGQGQFGT---TYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
+TLGR LG+G+FG+ L +E + + A K + K + S D+E+ RE M
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKML-KADIFSSSDIEEFLREAACMKEF- 58
Query: 158 GHKNI-----VTIKGAYEDSLCVHIV-MELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
H N+ V+++ + L + +V + G+L ++ E L ++
Sbjct: 59 DHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRF 118
Query: 212 VVEAC------HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGS 265
+++ S +HRDL N +L +++ ++ DFGLS G + S
Sbjct: 119 MIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVADFGLSKKIYSGDYYRQGCAS 175
Query: 266 PY---YVAPEVLLKH-YGPEADVWTAGVILY-ILLSGVPPFWAETQQGIFDAVLKGH 317
++A E L + Y +DVW GV ++ I+ G P+ I++ ++KG+
Sbjct: 176 KLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN 232
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 2e-06
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 105 RKLGQGQFGTTYLCTEIAT-GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIV 163
R +G+G FG Y T I + G + C S ++ E+VE +E IM + H N++
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFS-HPNVL 59
Query: 164 TIKG-AYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG-- 220
++ G +V+ G+L + I H K +L + V + L
Sbjct: 60 SLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVK--DLIGFGLQVAKGMEYLASK 117
Query: 221 -VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYY----------- 268
+HRDL N +L D+ F++K DFGL+ D+ YY
Sbjct: 118 KFVHRDLAARNCML---DESFTVKVADFGLA---------RDIYDKEYYSVHNHTGAKLP 165
Query: 269 ---VAPEVLLKH-YGPEADVWTAGVILYILLS-GVPPF 301
+A E L + ++DVW+ GV+L+ L++ G PP+
Sbjct: 166 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 203
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 2e-06
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 44/246 (17%)
Query: 103 LGRKLGQGQFGTTYL--CTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
L R+LG+G FG +L C + + ++ K S +D RE +++ +L H+
Sbjct: 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ-HE 67
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA-----AELTR-------- 207
+IV G + + +V E G+L + G + A AELT+
Sbjct: 68 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQ 127
Query: 208 -IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSP 266
I G+V S +HRDL N L+ ++ +K DFG+S DV +
Sbjct: 128 QIAAGMVYLA-SQHFVHRDLATRNCLV---GENLLVKIGDFGMS---------RDVYSTD 174
Query: 267 YY------------VAPE-VLLKHYGPEADVWTAGVILY-ILLSGVPPFWAETQQGIFDA 312
YY + PE ++ + + E+DVW+ GV+L+ I G P++ + + +
Sbjct: 175 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 234
Query: 313 VLKGHI 318
+ +G +
Sbjct: 235 ITQGRV 240
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 44.0 bits (105), Expect = 3e-06
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY 434
K AL ++ SLSEEE+ +F+ DTD G I+F+E L+R
Sbjct: 11 KRALALLGISLSEEEVD---ILFREFDTDGDGKISFEEFCVLLQRL 53
|
Length = 53 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR---EDVEDVRREIQIMH 154
RD G+ LG G FG T G E ++ + L + ++ E + E++I+
Sbjct: 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILS 96
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFD 189
HL HKNIV + GA V ++ E C G+L +
Sbjct: 97 HLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLN 131
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 4e-06
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 98 RDLYTLGRKLGQGQFGTTY--LCTEIATG---IEFACKSISKRKLISREDVEDVRREIQI 152
R+ TL R+LGQG FG Y +I G A K++++ + RE +E + E +
Sbjct: 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFL-NEASV 62
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSE----RKAAELTRI 208
M H ++V + G +VMEL A G+L + +E R L +
Sbjct: 63 MKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 121
Query: 209 IVGVVEACHSLGVM------HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV 262
I E + + HRDL N ++ DF++K DFG++ D+
Sbjct: 122 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMT---------RDI 169
Query: 263 VGSPYY------------VAPEVLLKH-YGPEADVWTAGVILY 292
+ YY +APE L + +D+W+ GV+L+
Sbjct: 170 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 212
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 4e-06
Identities = 60/233 (25%), Positives = 95/233 (40%), Gaps = 43/233 (18%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGI------EFACKSISKRKLIS-----REDVE-- 144
R T KLG+GQFG +LC A G+ +F+ + ++ RED
Sbjct: 4 RKRLTFKEKLGEGQFGEVHLCE--AEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKN 61
Query: 145 ---DVRREIQIMHHLAGHKNIVTIKGA--YEDSLCVHIVMELCAGGELFDRIIQRGHYSE 199
D +EI+IM L NI+ + D LC ++ E G+L ++ + R E
Sbjct: 62 ARNDFLKEIKIMSRLK-DPNIIRLLAVCITSDPLC--MITEYMENGDL-NQFLSRHEPQE 117
Query: 200 RKAAELTRI------------IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247
I ++ SL +HRDL N LV K ++++K DF
Sbjct: 118 AAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN-CLVGK--NYTIKIADF 174
Query: 248 GLSVFFKPGQIF----TDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLS 296
G+S G + V+ + +LL + +DVW GV L+ +L+
Sbjct: 175 GMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 5e-06
Identities = 55/239 (23%), Positives = 106/239 (44%), Gaps = 31/239 (12%)
Query: 102 TLGRKLGQGQFGTTY---LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
LG+ LG+G+FG+ L + + ++ A K++ K + + ++E+ E M
Sbjct: 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTM-KLDIHTYSEIEEFLSEAACMKDFD- 59
Query: 159 HKNI-----VTIKGAYEDSLCVHIV-MELCAGGELFDRII--QRGHYSERKAAE-LTRII 209
H N+ V + + + +V + G+L ++ + G E+ + L + +
Sbjct: 60 HPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFM 119
Query: 210 VGV---VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV------FFKPGQIFT 260
V + +E + +HRDL N +L +D ++ DFGLS +++ G+I
Sbjct: 120 VDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVADFGLSKKIYSGDYYRQGRIAK 176
Query: 261 DVVGSPYYVAPEVLLKH-YGPEADVWTAGVILY-ILLSGVPPFWAETQQGIFDAVLKGH 317
V ++A E L Y ++DVW GV ++ I G P+ I+D + G+
Sbjct: 177 MPVK---WIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN 232
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 6e-06
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 30/178 (16%)
Query: 140 REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSE 199
+ +++ RE +IMH L + IV + G E + + +VME+ +GG L +
Sbjct: 36 KSVRDEMMREAEIMHQLD-NPYIVRMIGVCE-AEALMLVMEMASGGPL-------NKFLS 86
Query: 200 RKAAELTRIIVGVVEACH--SLGV--------MHRDLKPENFLLVNKDDDFSLKAIDFGL 249
K E+T + VVE H S+G+ +HRDL N LLVN+ K DFGL
Sbjct: 87 GKKDEIT--VSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH---YAKISDFGL 141
Query: 250 S-VFFKPGQIFTDVVGSPY---YVAPEVLLKH-YGPEADVWTAGVILYILLS-GVPPF 301
S + + + APE + + +DVW+ G+ ++ S G P+
Sbjct: 142 SKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPY 199
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 6e-06
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 98 RDLYTLGRKLGQGQFG-----TTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI 152
RD LGR LG G FG T + + + ++ A K + + + + + E++I
Sbjct: 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKML--KSTARSSEKQALMSELKI 93
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH 196
M HL H NIV + GA ++I+ E C G+L D + + H
Sbjct: 94 MSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKH 137
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 7e-06
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 104 GRKLGQGQFGTTYLCTEIATG----IEFACKSISKRKLISREDVEDVRREIQIMHHLAGH 159
+ LG G FGT + I G I A K+I R R+ +++ + M L H
Sbjct: 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSL-DH 68
Query: 160 KNIVTIKGAYEDSLC----VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA 215
IV + G +C + +V +L G L D + R H L V + +
Sbjct: 69 AYIVRLLG-----ICPGASLQLVTQLSPLGSLLDHV--RQHRDSLDPQRLLNWCVQIAKG 121
Query: 216 CHSL---GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYV 269
+ L ++HR+L N LL D ++ DFG++ P +++ ++
Sbjct: 122 MYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWM 178
Query: 270 APE-VLLKHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKG 316
A E +L Y ++DVW+ GV ++ ++S G P+ + D + KG
Sbjct: 179 ALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 8e-06
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLR 432
K AL+ + E LSEEEI EM + +D D G I F+E +
Sbjct: 23 KAALKSLGEGLSEEEI---DEMIREVDKDGDGKIDFEEFLELMA 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 8e-06
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 18/102 (17%)
Query: 205 LTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264
+ R ++ ++ H ++HRD+K EN + +N D L DFG + F P D+
Sbjct: 187 IERSVLRAIQYLHENRIIHRDIKAEN-IFINHPGDVCLG--DFGAACF--P----VDINA 237
Query: 265 SPYY--------VAPEVLLKH-YGPEADVWTAGVILYILLSG 297
+ YY APE+L + YGP D+W+AG++L+ + +
Sbjct: 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATC 279
|
Length = 391 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 8e-06
Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 46/243 (18%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFA-CKSISKRKLISR-EDVEDVRREIQIMHHLAGHKNIV 163
+LG+ FG Y G++ A +I K I+ + + ++E +M L H NIV
Sbjct: 12 ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELH-HPNIV 70
Query: 164 TIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAA-----------------ELT 206
+ G V ++ E G+L + +I R +S+ + +
Sbjct: 71 CLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIA 130
Query: 207 RIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSP 266
I +E S +H+DL N L+ + +K D GLS ++ +
Sbjct: 131 IQIAAGMEYLSSHFFVHKDLAARNILI---GEQLHVKISDLGLS---------REIYSAD 178
Query: 267 YY-VAPEVLLK------------HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDA 312
YY V P+ LL + ++D+W+ GV+L+ + S G+ P++ + Q + +
Sbjct: 179 YYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238
Query: 313 VLK 315
V K
Sbjct: 239 VRK 241
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 9e-06
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 205 LTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264
+ +++ G+ H +G++HRD+KPEN L+ D +K IDFG +V G F + G
Sbjct: 315 MRQVLTGL-RKLHRIGIVHRDIKPENLLVTV---DGQVKIIDFGAAVDMCTGINFNPLYG 370
Query: 265 --SPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPF-WAETQQGIFDAVLKG 316
P Y PE L+ P++ + LLS PF W + +FD+ G
Sbjct: 371 MLDPRYSPPEELVM---PQSCPRAPAPAMAALLS---PFAWLYGRPDLFDSYTAG 419
|
Length = 507 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 51/288 (17%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGI-------EFACKSISKRKLISREDVEDVRREI 150
R+ T+ R+LGQG FG Y IA G+ A K++++ + RE +E + E
Sbjct: 5 REKITMSRELGQGSFGMVY--EGIAKGVVKDEPETRVAIKTVNEAASM-RERIEFL-NEA 60
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE----LT 206
+M H ++V + G ++MEL G+L + E + L
Sbjct: 61 SVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLK 119
Query: 207 RIIVGVVEACHSLGVM------HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT 260
++I E + + HRDL N ++ +DF++K DFG++
Sbjct: 120 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT---------R 167
Query: 261 DVVGSPYY------------VAPEVLLKH-YGPEADVWTAGVILY-ILLSGVPPFWAETQ 306
D+ + YY ++PE L + +DVW+ GV+L+ I P+ +
Sbjct: 168 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN 227
Query: 307 QGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL 354
+ + V++G + + D P D +L+R P R + E++
Sbjct: 228 EQVLRFVMEGGLLDKPDNCP---DMLFELMRMCWQYNPKMRPSFLEII 272
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 64/249 (25%), Positives = 100/249 (40%), Gaps = 75/249 (30%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGI-EFACKS--ISKRKLIS--------REDV--- 143
R KLG+GQFG +LC A G+ +F+ K+ + R D
Sbjct: 4 RQPLNFVEKLGEGQFGEVHLCE--ADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDN 61
Query: 144 --EDVRREIQIMHHLAGHKNIVTIKGA--YEDSLCVHIVMELCAGGELFDRIIQRGHYSE 199
ED +E++I+ L+ NI + G + LC ++ME G+L + +
Sbjct: 62 AREDFLKEVKILSRLS-DPNIARLLGVCTVDPPLC--MIMEYMENGDL-------NQFLQ 111
Query: 200 RKAAEL-------------------TRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240
+ AE T+I G+ SL +HRDL N LV K ++
Sbjct: 112 KHVAETSGLACNSKSLSFSTLLYMATQIASGMRY-LESLNFVHRDLATRN-CLVGK--NY 167
Query: 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYY------VAP-------EVLLKHYGPEADVWTA 287
++K DFG+S ++ S YY P VLL + ++DVW
Sbjct: 168 TIKIADFGMS---------RNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAF 218
Query: 288 GVILYILLS 296
GV L+ +L+
Sbjct: 219 GVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 41.2 bits (98), Expect = 2e-05
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 513 LEDIIREVDQDNDGRIDYGEFVAMMQK 539
L++ R D+D DG+ID+ EF +++
Sbjct: 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 31/208 (14%)
Query: 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDV--EDVRREIQIMH 154
+R Y + L G G ++CT+ ++K+I + + REI I+
Sbjct: 90 VRMQYNILSSLTPGSEGEVFVCTKHG--------DEQRKKVIVKAVTGGKTPGREIDILK 141
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMEL--CAGGELFDRIIQRGHYSERKAAELTRIIVGV 212
++ H+ I+ + AY V +VM C +LF + + G +A + R ++
Sbjct: 142 TIS-HRAIINLIHAYRWKSTVCMVMPKYKC---DLFTYVDRSGPLPLEQAITIQRRLLEA 197
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV-----FFKP---GQIFTDVVG 264
+ H G++HRD+K EN L ++ ++ L DFG + P G T
Sbjct: 198 LAYLHGRGIIHRDVKTENIFL-DEPENAVLG--DFGAACKLDAHPDTPQCYGWSGTLETN 254
Query: 265 SPYYVAPEVLLKHYGPEADVWTAGVILY 292
SP +A L Y + D+W+AG++L+
Sbjct: 255 SPELLA----LDPYCAKTDIWSAGLVLF 278
|
Length = 392 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 3e-05
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 408 KEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 466
++F+++D D G I+ DE + L + S L + + + D AD D G +D EF A
Sbjct: 2 DQIFRSLDPDGDGLISGDEARPFLGK--SGLPRSVLAQIWDLADTDKDGKLDKEEFAIA 58
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 40.5 bits (96), Expect = 3e-05
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 513 LEDIIREVDQDNDGRIDYGEFVAMMQK 539
L++ +E D+D DG+I + EF +++K
Sbjct: 2 LKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 40.1 bits (95), Expect = 4e-05
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRR 433
LKE FK D D G I+F+E K L++
Sbjct: 2 LKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 5e-05
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYG 435
L+E FK D D G I+ +EL+ LR G
Sbjct: 2 LREAFKLFDKDGDGYISAEELRKALRSLG 30
|
Length = 30 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 39.7 bits (94), Expect = 6e-05
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRR 433
LKE F+ D D G I F+E K L+
Sbjct: 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 7e-05
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 47/231 (20%)
Query: 106 KLGQGQFGTTYLCTEIAT-----GIEFACKSISKRKL-----ISREDV-----EDVRREI 150
KLG+GQFG +LC E+ ++F R L I R D D +E+
Sbjct: 12 KLGEGQFGEVHLC-EVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEV 70
Query: 151 QIMHHLAGHKNIVTIKGA--YEDSLCVHIVMELCAGGEL--------FDRIIQRGHYSER 200
+I+ L NI+ + G ED LC ++ E G+L D + G+ +
Sbjct: 71 KILSRLK-DPNIIRLLGVCVDEDPLC--MITEYMENGDLNQFLSSHHLDDKEENGNDAVP 127
Query: 201 KAAELTRI-----------IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249
A L I I ++ SL +HRDL N L+ ++ ++K DFG+
Sbjct: 128 PAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLV---GENLTIKIADFGM 184
Query: 250 SVFFKPG---QIFTDVVGSPYYVAPE-VLLKHYGPEADVWTAGVILYILLS 296
S G +I V ++A E +L+ + +DVW GV L+ +L
Sbjct: 185 SRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 9e-05
Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 42/244 (17%)
Query: 102 TLGRKLGQGQFGTTY--LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH 159
LG+ LG+G+FG+ + + ++ A K++ K + +R ++ED E M H
Sbjct: 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTM-KIAICTRSEMEDFLSEAVCMKEF-DH 59
Query: 160 KNIVTIKGAYEDSLCVH-----------IVMELCAGGEL-----FDRIIQRGHY--SERK 201
N++ + G +C+ +++ G+L + R+ Y ++
Sbjct: 60 PNVMRLIG-----VCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQML 114
Query: 202 AAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV------FFKP 255
+T I G+ E S +HRDL N +L +++ ++ DFGLS +++
Sbjct: 115 VKFMTDIASGM-EYLSSKSFIHRDLAARNCML---NENMNVCVADFGLSKKIYNGDYYRQ 170
Query: 256 GQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILY-ILLSGVPPFWAETQQGIFDAV 313
G+I V ++A E L Y ++DVW+ GV ++ I G P+ I+D +
Sbjct: 171 GRIAKMPVK---WIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYL 227
Query: 314 LKGH 317
+G+
Sbjct: 228 RQGN 231
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 9e-05
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 98 RDLYTLGRKLGQGQFG-----TTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI 152
RD LGR LG G FG T Y + ++ A K + S + + + E++I
Sbjct: 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEK--QALMSELKI 93
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFD 189
M HL H NIV + GA S ++I+ E C G+L +
Sbjct: 94 MTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVN 130
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 147 RREIQIMHHLAGHKNIVTIKGAYE-DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAEL 205
RRE +IM K V + Y D IVME G L D +I E + +
Sbjct: 47 RREARIMSRA--RKAGVNVPAVYFVDPENFIIVMEYIEGEPLKD-LINSNGMEELELSRE 103
Query: 206 TRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252
+VG + HS G++H DL N +L L IDFGL+ F
Sbjct: 104 IGRLVGKL---HSAGIIHGDLTTSNMIL--SGGKIYL--IDFGLAEF 143
|
Length = 211 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 4e-04
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 483 FQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
F+ D DG G I+ DE + + + +L I D D DG++D EF M
Sbjct: 5 FRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAM 59
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 37.2 bits (87), Expect = 5e-04
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 479 LVAAFQYFDKDGSGYITVDELQQACAEHN 507
L AF+ FDKDG GYI+ +EL++A
Sbjct: 2 LREAFKLFDKDGDGYISAEELRKALRSLG 30
|
Length = 30 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 59/262 (22%), Positives = 115/262 (43%), Gaps = 27/262 (10%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L +KLG GQFG ++ T + A K++ + VE E +M L
Sbjct: 5 RESLKLEKKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQ 59
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH 217
H +V + ++I+ E A G L D ++ S++ +L + E
Sbjct: 60 -HDKLVKLHAVVTKE-PIYIITEFMAKGSLLD-FLKSDEGSKQPLPKLIDFSAQIAEGMA 116
Query: 218 SL---GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY---YVAP 271
+ +HRDL+ N L+ K DFGL+ + + +T G+ + + AP
Sbjct: 117 FIEQRNYIHRDLRAANILVSAS---LVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 172
Query: 272 EVLLKHYGP---EADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327
E + ++G ++DVW+ G++L +++ G P+ + + A+ +G+ + P
Sbjct: 173 EAI--NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCP- 229
Query: 328 ISDSAKDLIRKMLCSQPSERLT 349
+ +++ + ++P ER T
Sbjct: 230 --EELYNIMMRCWKNRPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 14/116 (12%)
Query: 139 SREDVEDVRREIQIMHHLAGHKNIV-TIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHY 197
SRE D RE+ I+ LA V + + E +++ME G L + +
Sbjct: 31 SREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEVSEEEKED 90
Query: 198 SERKAAELTRIIVGVVEACHSL---GVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250
+ AEL + H L + H DL P N L+ DD L ID+ +
Sbjct: 91 IAEQLAELLAKL-------HQLPLLVLCHGDLHPGNILV---DDGKILGIIDWEYA 136
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 36.7 bits (86), Expect = 7e-04
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 479 LVAAFQYFDKDGSGYITVDELQQACAE 505
L AF+ FDKDG G I+ +E ++ +
Sbjct: 2 LKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|238131 cd00213, S-100, S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Score = 38.2 bits (90), Expect = 8e-04
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Query: 479 LVAAF-QYFDKDGSGY-ITVDELQQACAEHNMTDVL--------LEDIIREVDQDNDGRI 528
++ F +Y K+G ++ EL++ E + + L ++ I++++D + DG++
Sbjct: 10 IIDVFHKYSGKEGDKDTLSKKELKE-LLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKV 68
Query: 529 DYGEFVAMMQK 539
D+ EF+ ++ K
Sbjct: 69 DFQEFLVLIGK 79
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents the interaction site of S100 proteins with their target proteins. There is experimental evidence showing that many S100 proteins have multiple binding partners with diverse mode of interaction with different targets. In addition to S100 proteins (such as S100A1,-3,-4,-6,-7,-10,-11,and -13), this group includes the ''fused'' gene family, a group of calcium binding S100-related proteins. The ''fused'' gene family includes multifunctional epidermal differentiation proteins - profilaggrin, trichohyalin, repetin, hornerin, and cornulin; functionally these proteins are associated with keratin intermediate filaments and partially crosslinked to the cell envelope. These ''fused'' gene proteins contain N-terminal sequence with two Ca-binding EF-hands motif, which may be associated with calcium signaling in epidermal cells and autoprocessing in a calcium-dependent manner. In contrast to S100 proteins, "fused" gene family proteins contain an extraordinary high number of almost perfect peptide repeats with regular array of polar and charged residues similar to many known cell envelope proteins. Length = 88 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 36.5 bits (86), Expect = 8e-04
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 407 LKEMFKAMDTDNSGAITFDELKA 429
LK++F+ DT+ G I+ +ELK
Sbjct: 1 LKDLFRQFDTNGDGKISKEELKR 23
|
Length = 25 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 35.9 bits (84), Expect = 0.001
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 442 EIRDLMDAADVDNSGTIDYGEFIAATVHL 470
E+++ D D G I + EF L
Sbjct: 1 ELKEAFKEFDKDGDGKISFEEFKELLKKL 29
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.001
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 26/210 (12%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKR---KLISRED-----VEDVRREIQIMHHLA 157
+LG G FGT + G+ + K K K++ ++ +++ RE +M L
Sbjct: 2 ELGSGNFGT------VKKGM-YKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL- 53
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH 217
+ IV + G E + +VMEL G L + + H +E+ EL + ++
Sbjct: 54 DNPYIVRMIGICEAESWM-LVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLE 112
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGS---PY-YVAPEV 273
+HRDL N LLV + K DFGLS + + P + APE
Sbjct: 113 ETNFVHRDLAARNVLLVTQH---YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPEC 169
Query: 274 LLKH-YGPEADVWTAGVILYILLS-GVPPF 301
+ + + ++DVW+ GV+++ S G P+
Sbjct: 170 MNYYKFSSKSDVWSFGVLMWEAFSYGQKPY 199
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 35.7 bits (84), Expect = 0.002
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 479 LVAAFQYFDKDGSGYITVDELQQ 501
L F+ FD +G G I+ +EL++
Sbjct: 1 LKDLFRQFDTNGDGKISKEELKR 23
|
Length = 25 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 58/258 (22%)
Query: 103 LGRKLGQGQFGTTY--LCTEIA--TGIE-FACKSISKRKLISREDVEDVRREIQIMHHLA 157
LG+ LG+G+FG + G A K + + S ++ D+ E ++ +
Sbjct: 4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVN 61
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGEL--FDRIIQR------GHYSERKAAELTR-- 207
H +++ + GA + +++E G L F R ++ G R ++ L
Sbjct: 62 -HPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPD 120
Query: 208 ---IIVGVV-----EACH------SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253
+ +G + + + ++HRDL N L+ + +K DFGLS
Sbjct: 121 ERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVA---EGRKMKISDFGLS--- 174
Query: 254 KPGQIFTDVVGSPYYV------------APEVLLKH-YGPEADVWTAGVILYILLS-GVP 299
DV YV A E L H Y ++DVW+ GV+L+ +++ G
Sbjct: 175 ------RDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 228
Query: 300 PFWAETQQGIFDAVLKGH 317
P+ + +F+ + G+
Sbjct: 229 PYPGIAPERLFNLLKTGY 246
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 222 MHRDLKPENFLLVNKDDDFSLKAIDFGLS--VFFKPGQIFTDVVGSPY-YVAPEVLL-KH 277
+HRDL N LL + +K DFGL+ ++ P + P ++APE + K
Sbjct: 196 IHRDLAARNILLSENN---VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKV 252
Query: 278 YGPEADVWTAGVILYILLS-GVPPF 301
Y ++DVW+ GV+L+ + S G P+
Sbjct: 253 YTTQSDVWSFGVLLWEIFSLGASPY 277
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.002
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPE 272
++ +L +HR K N LL D LK G F P Q D PY++APE
Sbjct: 24 LQCLGALRELHRQAKSGNILL---TWDGLLKL--DGSVAFKTPEQSRPD----PYFMAPE 74
Query: 273 VLL-KHYGPEADVWTAGVILYILLSGVPP 300
V+ + Y +AD+++ G+ LY L P
Sbjct: 75 VIQGQSYTEKADIYSLGITLYEALDYELP 103
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 26/94 (27%)
Query: 222 MHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV------------ 269
+HRDL N LL + +K DFGL+ D+ P YV
Sbjct: 195 IHRDLAARNILLSENN---VVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWM 242
Query: 270 APEVLL-KHYGPEADVWTAGVILYILLS-GVPPF 301
APE + K Y ++DVW+ GV+L+ + S G P+
Sbjct: 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPY 276
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|218977 pfam06293, Kdo, Lipopolysaccharide kinase (Kdo/WaaP) family | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 177 IVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN 235
++ E G + + + +E L R + ++ H GV H DL N LL
Sbjct: 94 LLTERLEGAQDLVTWLAQWADPAEELRRALWRAVGRLIARMHRAGVNHTDLNAHNILLDT 153
Query: 236 KDDDFSLKAIDF 247
+ F + IDF
Sbjct: 154 GEGGFKVWLIDF 165
|
These lipopolysaccharide kinases are related to protein kinases pfam00069. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of S. enterica. Length = 206 |
| >gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 198 SERKAAELTRIIVGVVEA---CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254
ER+ + I+ ++ A HS G++HRD+KP+N + F K ID G + +
Sbjct: 250 LERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSF--KIIDLGAAADLR 307
Query: 255 PG--QIFTDVVGSPYYVAPE 272
G I + + P Y APE
Sbjct: 308 VGINYIPKEFLLDPRYAAPE 327
|
Length = 566 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (92), Expect = 0.004
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV--VGSPYYVA 270
VE H ++HRD+K EN L N D L DFG ++ F+ + D VG+ +
Sbjct: 280 VEYIHDKKLIHRDIKLENIFL-NCDGKIVLG--DFGTAMPFEKEREAFDYGWVGTVATNS 336
Query: 271 PEVLLKH-YGPEADVWTAGVILYILLS 296
PE+L Y D+W+ G+IL +LS
Sbjct: 337 PEILAGDGYCEITDIWSCGLILLDMLS 363
|
Length = 501 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 222 MHRDLKPENFLLVNKDDDFSLKAIDFGLS--VFFKPGQIFTDVVGSPY-YVAPEVLL-KH 277
+HRDL N LL + +K DFGL+ ++ P + P ++APE + +
Sbjct: 201 IHRDLAARNILLSENN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 257
Query: 278 YGPEADVWTAGVILYILLS-GVPPF 301
Y ++DVW+ GV+L+ + S G P+
Sbjct: 258 YTIQSDVWSFGVLLWEIFSLGASPY 282
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 564 | |||
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.98 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.97 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.97 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.95 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.94 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.94 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.94 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.92 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.92 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.91 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.9 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.9 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.89 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.89 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.88 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.87 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.87 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.86 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.84 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.84 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.83 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.82 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.8 | |
| PTZ00183 | 158 | centrin; Provisional | 99.8 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.8 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.8 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.79 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 99.78 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.77 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.77 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.76 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.75 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.73 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.73 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 99.71 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 99.69 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.68 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.68 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.67 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.65 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.62 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.58 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.53 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.51 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.51 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.5 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.48 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.47 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.46 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.46 | |
| PTZ00183 | 158 | centrin; Provisional | 99.44 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.42 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.38 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.38 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.37 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.36 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.35 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.27 | |
| KOG0038 | 189 | consensus Ca2+-binding kinase interacting protein | 99.25 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.21 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.18 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.16 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.12 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.1 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.07 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.07 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.07 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.03 | |
| KOG4251 | 362 | consensus Calcium binding protein [General functio | 99.01 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.01 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.96 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 98.96 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 98.95 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 98.92 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 98.91 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.9 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 98.89 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 98.88 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 98.88 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 98.87 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 98.86 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.84 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.83 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.83 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.81 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.8 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.77 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.76 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.76 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.73 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.73 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 98.72 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.7 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 98.7 |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-63 Score=475.51 Aligned_cols=271 Identities=38% Similarity=0.646 Sum_probs=248.9
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC----HHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS----REDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
..+.+.|.+.+.||+|+||.|-+|..+.||+.||||++.++.... ......+.+|+++|++|. |||||+++++|+
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~-HP~IV~~~d~f~ 246 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS-HPNIVRIKDFFE 246 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC-CCCEEEEeeeee
Confidence 347788999999999999999999999999999999998876543 123344679999999997 999999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
.....||||||++||+|.+.+..++.+.+...+.+++|++.||.|||++||+||||||+|||+..+.++..+||+|||+|
T Consensus 247 ~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 247 VPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred cCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999987777889999999999
Q ss_pred cccCCCCceecccCCCcccchhhhhhc----CCCcchHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCccCCCCCC
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLLKH----YGPEADVWTAGVILYILLSGVPPFWAETQQG-IFDAVLKGHIDFESDPW 325 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~DvwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 325 (564)
+.........+.||||.|.|||++.+. +..++|+||+||+||-+|+|.+||.+..... +.++|.+|.+.+.+..|
T Consensus 327 K~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w 406 (475)
T KOG0615|consen 327 KVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQW 406 (475)
T ss_pred hccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhh
Confidence 999888888999999999999999732 4558999999999999999999998766554 89999999999999999
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCC
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAP 366 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~ 366 (564)
..+|+++++||.+||..||++|||++++|+||||+......
T Consensus 407 ~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~s 447 (475)
T KOG0615|consen 407 DRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCLS 447 (475)
T ss_pred hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccccc
Confidence 99999999999999999999999999999999999766543
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-58 Score=464.03 Aligned_cols=256 Identities=38% Similarity=0.589 Sum_probs=243.6
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
.+|..++.||+|+|+.||.+++..+|+.||+|++.+..+......+++.+||+|.++|+ |||||+++++|++...+|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 46999999999999999999999999999999999988888888999999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-C
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-Q 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~ 257 (564)
.|+|..++|.+++++++.++|.+++.+++||+.||.|||+++|||||||..|+++ +++.+|||+|||+|.....+ +
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCccc
Confidence 9999999999999999999999999999999999999999999999999999999 88899999999999988744 7
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
...+.||||.|.|||++.+ .++..+||||+||++|-||+|++||...+..+++..|....+.+|. .+|.++++||
T Consensus 174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~----~ls~~A~dLI 249 (592)
T KOG0575|consen 174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS----HLSAEAKDLI 249 (592)
T ss_pred ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc----ccCHHHHHHH
Confidence 7788999999999999985 5999999999999999999999999999999999999999888775 5899999999
Q ss_pred HHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.+||.+||.+|||+++||.|+||+..
T Consensus 250 ~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 250 RKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred HHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 99999999999999999999999654
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-60 Score=421.50 Aligned_cols=299 Identities=39% Similarity=0.719 Sum_probs=277.4
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
.+.+.|.+.+.||+|.|+.||+|.+..+|+.+|+|++....+. ....+.+.+|++|.+.|+ ||||+++.+.+.+....
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~-~~~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFH 85 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhc-cccHHHHHHHHHHHHhcC-CCcEeehhhhhccccee
Confidence 3667899999999999999999999999999999999876664 447889999999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|||+|++.|++|..-+.++-.++|..+..+++||+.||.|||.+||||||+||+|+|+.+.+..--+||+|||+|.....
T Consensus 86 ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred EEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 99999999999998888877789999999999999999999999999999999999998888788899999999999887
Q ss_pred CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
+......+|||.|||||++.+ .|+..+|||+.|||||-||.|++||++.+...+++.|++|.+.++.+.|+.+++++++
T Consensus 166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~ 245 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKS 245 (355)
T ss_pred ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHH
Confidence 777788999999999999986 5999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHhh
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIA 396 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~~n~~~~~~~~~~~ 396 (564)
||++||..||.+|+|+.|+|+|||+++...--.....++..+++++|.+..+++-+.+.-+.
T Consensus 246 LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~lrkfNarRKLKgavLtav~ 307 (355)
T KOG0033|consen 246 LIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTVI 307 (355)
T ss_pred HHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999876655556678899999999999999888776554
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-57 Score=431.36 Aligned_cols=259 Identities=34% Similarity=0.608 Sum_probs=240.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.++||+|+||+||+++.+.+++.||+|++++..+......+....|..||..++ ||+||+++-.|++...+|+|
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCeEEEE
Confidence 45999999999999999999999999999999999998877778889999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc-CCCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~-~~~~ 257 (564)
+||+.||.|+.+|++.+.+++..++.++..|+.||.|||++|||||||||+|||+ |..|+++|+|||+++.. ..+.
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccCCC
Confidence 9999999999999999999999999999999999999999999999999999999 89999999999999854 3445
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
...+.|||+.|||||++.+ .|+.++|+||||+++|||++|.+||.+.+...++++|.++....+. ..++.++++||
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p---~~ls~~ardll 257 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP---GYLSEEARDLL 257 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC---ccCCHHHHHHH
Confidence 6667899999999999985 5999999999999999999999999999999999999998744332 34899999999
Q ss_pred HHhcccCCCCCC----CHHHHhcCCCcCCCCC
Q 008475 337 RKMLCSQPSERL----TAHEVLCHPWICENGV 364 (564)
Q Consensus 337 ~~~l~~dp~~R~----s~~~vl~hp~~~~~~~ 364 (564)
+++|..||++|. .+.++-+||||+...+
T Consensus 258 ~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 258 KKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred HHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence 999999999996 7899999999997653
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-56 Score=447.56 Aligned_cols=323 Identities=61% Similarity=0.995 Sum_probs=299.1
Q ss_pred cccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 93 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
....+.+.|++.+.||.|.||.||+|+++.+|+.+|+|.+.+...........+.+|+.+|+++.+|||||.++++|++.
T Consensus 29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~ 108 (382)
T KOG0032|consen 29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP 108 (382)
T ss_pred ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence 34556778999999999999999999999999999999999888766667788999999999998899999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC-CCcEEEeeCCCcc
Q 008475 173 LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD-DFSLKAIDFGLSV 251 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~-~~~~kl~DfG~~~ 251 (564)
..+++|||+|.||.|++.+... .+++..+..+++||+.|+.|||+.||+||||||+|+|+...+. .+.+|++|||++.
T Consensus 109 ~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 109 DSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred CeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 9999999999999999999877 5999999999999999999999999999999999999976544 4689999999999
Q ss_pred ccCCCCceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
...+.......+||+.|+|||++. ..|+..+||||+|+++|.|++|.+||++.+.......|.++.+.+..++|+.++.
T Consensus 188 ~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~ 267 (382)
T KOG0032|consen 188 FIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISE 267 (382)
T ss_pred EccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCH
Confidence 988877888999999999999999 6799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHhhhhhhHHHHHhHhhh
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEM 410 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~~n~~~~~~~~~~~~~~~~~~~~~l~~~ 410 (564)
.+++||++||..||.+|+|+.++|+|||+......+..........+++++.+.+++++..++.....++ +..++..
T Consensus 268 ~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 344 (382)
T KOG0032|consen 268 SAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALRVLAESLS---ISGLKEM 344 (382)
T ss_pred HHHHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHHHHhhhhh---HHHHHHH
Confidence 9999999999999999999999999999999877777777778888899999999999887777777766 7788888
Q ss_pred hhcccCCCC
Q 008475 411 FKAMDTDNS 419 (564)
Q Consensus 411 F~~~D~d~~ 419 (564)
|..+|.+++
T Consensus 345 ~~~~~~~~~ 353 (382)
T KOG0032|consen 345 FKLMDTDNN 353 (382)
T ss_pred HHhhccccc
Confidence 999988877
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-56 Score=423.76 Aligned_cols=257 Identities=26% Similarity=0.370 Sum_probs=230.0
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-eEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-CVHI 177 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-~~~l 177 (564)
...+.++.||+|..|+||+|+|+.|++.+|+|+|... ..+...+++.+|+++++.+. ||+||.+++.|.... .++|
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~-spyIV~~ygaF~~~~~~isI 155 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQ-SPYIVGFYGAFYSNGEEISI 155 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCC-CCCeeeEeEEEEeCCceEEe
Confidence 3466688999999999999999999999999999432 36777889999999999995 999999999999998 5999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+||||.||+|...+...++++|.....++.+|+.||.|||+ ++||||||||+|||+ +..|.|||||||.+......
T Consensus 156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHhhhh
Confidence 99999999999999888999999999999999999999995 999999999999999 77899999999999987665
Q ss_pred CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE-----TQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
...+++||..|||||.+.+ .|+.++||||||++++|+++|+.||... ...+++..|..+..+-.+. ..+|+
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~--~~fS~ 309 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPE--GEFSP 309 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc--ccCCH
Confidence 6688999999999999996 6999999999999999999999999774 5667888887754332221 24899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
++++||..||++||.+|||++|+++|||+++...
T Consensus 310 ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 310 EFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 9999999999999999999999999999997553
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-56 Score=439.79 Aligned_cols=260 Identities=37% Similarity=0.622 Sum_probs=242.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
.+|..++.||+|+|++|++|+++.+++.||||++.++.+..+...+-+..|-..|.+|.+||.|++|+-.|+++..+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 35999999999999999999999999999999999988877777888999999999998899999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
+||+++|+|+++|.+.+.|++..++.++.+|+.||+|||++|||||||||+|||+ |+++++||+|||.|+.+.+...
T Consensus 153 Le~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~~~~ 229 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSPSQK 229 (604)
T ss_pred EEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCChhhc
Confidence 9999999999999999999999999999999999999999999999999999999 9999999999999988754321
Q ss_pred e--------------ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC
Q 008475 259 F--------------TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD 323 (564)
Q Consensus 259 ~--------------~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 323 (564)
. ..++||..|.+||+|.. ..++.+|+|+||||||+|+.|.+||.+.++.-+++.|+.-.+.|+.
T Consensus 230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~- 308 (604)
T KOG0592|consen 230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE- 308 (604)
T ss_pred cccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC-
Confidence 1 45899999999999985 5889999999999999999999999999999999999998888775
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 324 ~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
.+++.+.+||+++|..||.+|+|+++|.+||||.+..+.
T Consensus 309 ---~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~ 347 (604)
T KOG0592|consen 309 ---GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWE 347 (604)
T ss_pred ---CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChh
Confidence 478999999999999999999999999999999986543
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-56 Score=407.38 Aligned_cols=256 Identities=33% Similarity=0.603 Sum_probs=240.9
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||.|+||+|.+++++.+|..+|+|++.+..+..-.+++...+|..+|+.+. ||+++++++.|.+...+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEEEE
Confidence 45889999999999999999999999999999999988877888889999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|||++||.|+.++++.+++++..++.++.||+.||+|||+++|++|||||+|||+ |.+|.+||+|||+|+.....
T Consensus 123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~r-- 197 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSGR-- 197 (355)
T ss_pred EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecCc--
Confidence 9999999999999999999999999999999999999999999999999999999 89999999999999986543
Q ss_pred eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
..+.||||.|+|||++. +.|+.++|+|||||++|||+.|.+||...++.+++++|..+...++. .+++++++||.
T Consensus 198 T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~----~fs~~~kdLl~ 273 (355)
T KOG0616|consen 198 TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS----YFSSDAKDLLK 273 (355)
T ss_pred EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc----ccCHHHHHHHH
Confidence 67899999999999998 56999999999999999999999999999999999999999998875 48999999999
Q ss_pred HhcccCCCCCC-----CHHHHhcCCCcCCCCC
Q 008475 338 KMLCSQPSERL-----TAHEVLCHPWICENGV 364 (564)
Q Consensus 338 ~~l~~dp~~R~-----s~~~vl~hp~~~~~~~ 364 (564)
++|+.|-.+|. ...+|.+||||+...+
T Consensus 274 ~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W 305 (355)
T KOG0616|consen 274 KLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDW 305 (355)
T ss_pred HHHhhhhHhhhcCcCCCccccccCcccccccH
Confidence 99999999994 5789999999997543
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-55 Score=419.72 Aligned_cols=264 Identities=35% Similarity=0.609 Sum_probs=242.2
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
...|.+.+.||.|+||+||+|+++.++..||||.+.+... .....+.+..|+.+|+.++ |||||.+++++..++.+|+
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEEE
Confidence 4559999999999999999999999999999999987765 6777888999999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCC---CcEEEeeCCCccccC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD---FSLKAIDFGLSVFFK 254 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~---~~~kl~DfG~~~~~~ 254 (564)
|||||.||+|.++++..+.+++..++.++.||+.||++||+++||||||||+|||+..+... -.+||+|||+|+...
T Consensus 87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 99999999999999999999999999999999999999999999999999999999765223 679999999999999
Q ss_pred CCCceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
++....+.||++.|||||++. ++|+.|+|+||+|+|+|+|++|+.||...+..+++..+.++....+.. ...++..+.
T Consensus 167 ~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~-~~~~s~~~~ 245 (429)
T KOG0595|consen 167 PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVL-PAELSNPLR 245 (429)
T ss_pred chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCch-hhhccCchh
Confidence 988888999999999999996 789999999999999999999999999999999999888876655443 245677788
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+|+...|..+|..|.+..+-+.|+++.....
T Consensus 246 ~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p~ 276 (429)
T KOG0595|consen 246 ELLISLLQRNPKDRISFEDFFDHPFLAANPQ 276 (429)
T ss_pred hhhhHHHhcCccccCchHHhhhhhhcccCcc
Confidence 9999999999999999999999999987553
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-56 Score=437.25 Aligned_cols=285 Identities=31% Similarity=0.510 Sum_probs=251.4
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
-.+.|++++.||+|+||.||+|+.+.||..+|+|++++........++.++.|-.+|.... +|+||+|+-.|++..++|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d-s~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD-SPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC-CCcEEEEEEEecCCCeeE
Confidence 3466999999999999999999999999999999999998888899999999999999964 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP- 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~- 255 (564)
|||||++||++..+|...+.+++..++.++.+++.||+.||+.|+|||||||+|+|| |..|++||+|||++.....
T Consensus 218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhhhh
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999753211
Q ss_pred ---------------------CC-c-------------------------eecccCCCcccchhhhhh-cCCCcchHHHH
Q 008475 256 ---------------------GQ-I-------------------------FTDVVGSPYYVAPEVLLK-HYGPEADVWTA 287 (564)
Q Consensus 256 ---------------------~~-~-------------------------~~~~~gt~~y~aPE~~~~-~~~~~~DvwSl 287 (564)
.. . ....+|||.|+|||++.+ .|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 00 0 112689999999999996 49999999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCCCcCCCCC
Q 008475 288 GVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL---TAHEVLCHPWICENGV 364 (564)
Q Consensus 288 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~---s~~~vl~hp~~~~~~~ 364 (564)
|||+||||.|.+||.+.++.++..+|......+..+.-..++++++|||.+||+ ||++|. +++||.+||||+...+
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W 453 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW 453 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence 999999999999999999999999999988766666667789999999999999 999998 5999999999998776
Q ss_pred CCCCCCCHHHHHHHHhhhhhhH
Q 008475 365 APDRSLDPAVLSRLKQFSAMNK 386 (564)
Q Consensus 365 ~~~~~~~~~~~~~~k~~~~~n~ 386 (564)
..-+...+++..+++.-.++.+
T Consensus 454 ~~l~~~~apfvP~v~~~~DT~y 475 (550)
T KOG0605|consen 454 DHLREMPAPFVPQVNSELDTQY 475 (550)
T ss_pred chhhcCCCCCCCCCCCcccccc
Confidence 5544444555555544444333
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-56 Score=408.02 Aligned_cols=257 Identities=26% Similarity=0.501 Sum_probs=223.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|+.+.++|+|+||+||+|+++.||+.||||++.... .++...+-..+||++|++|+ |||+|.++++|.....+++|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEEE
Confidence 45888999999999999999999999999999996543 23444556789999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CC
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~ 256 (564)
+|||+. ++++.|... ..++.+.+..+++|++.|+.|||+++||||||||+|||+ ..++.+||||||+|+... ++
T Consensus 80 FE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi---t~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI---TQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred eeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE---ecCCcEEeccchhhHhhcCCc
Confidence 999955 666666654 458999999999999999999999999999999999999 778899999999999887 78
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH----------------- 317 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~----------------- 317 (564)
..++.++.|++|+|||.+.+ +|+..+||||+||++.||++|.+.|.+.+.-+.+-.|.+..
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 88999999999999999987 59999999999999999999999999998877665554311
Q ss_pred --ccCC--------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 318 --IDFE--------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 318 --~~~~--------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+.++ ...++.++.-+.||+++||+.||++|++.+|+|.||||.+
T Consensus 236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 0111 1123557888999999999999999999999999999954
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-54 Score=437.82 Aligned_cols=257 Identities=37% Similarity=0.647 Sum_probs=242.9
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
.-|++++.||.|+.|.|-+|++..||+.+|||+|.+...........+.+||-||+.+. ||||+++|++|+...++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~-HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE-HPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc-CCCeeeeeeeeccCceEEEE
Confidence 34999999999999999999999999999999998875556666778999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
.||++||.|++++..++++++.+++.+++||+.|+.|||..+|+||||||+|+|+ |..+++||+|||+|....++..
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccCCcc
Confidence 9999999999999999999999999999999999999999999999999999999 7777899999999999889999
Q ss_pred eecccCCCcccchhhhhhc--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLKH--YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
..+.||+|.|.|||++.|. .+.++||||.|||||.||||++||.+++...++.++.+|.+..+ ..+|.++++||
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP----s~Is~eaQdLL 243 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP----SNISSEAQDLL 243 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC----CcCCHHHHHHH
Confidence 9999999999999999964 47899999999999999999999999999999999999998876 46999999999
Q ss_pred HHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.+||..||++|+|.+||++|||+.+..
T Consensus 244 r~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 244 RRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred HHHhccCccccccHHHHhhCchhhcCC
Confidence 999999999999999999999999764
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-55 Score=394.83 Aligned_cols=273 Identities=36% Similarity=0.657 Sum_probs=249.4
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC-----CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI-----SREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
+-..|.-.++||.|..++|-+|.++.+|.++|+|+|...... ..+..+...+|+.||+++.+||+|+++.++|+.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 445577788999999999999999999999999998653321 233456678899999999999999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
+..+++|+|+|+.|.|+++|...-.++++..+.|++|++.|++|||.++||||||||+|||+ +++.++||+|||+|+
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGFAC 171 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEeccceee
Confidence 99999999999999999999988889999999999999999999999999999999999999 888999999999999
Q ss_pred ccCCCCceecccCCCcccchhhhh-------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCC
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLL-------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP 324 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 324 (564)
.+.+++.....||||+|+|||.+. ..|+...|+|++|||+|-||.|.+||+...+.-++..|..|.++|..+.
T Consensus 172 ~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~spe 251 (411)
T KOG0599|consen 172 QLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPE 251 (411)
T ss_pred ccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcc
Confidence 999999999999999999999985 2488999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCH
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDP 372 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~ 372 (564)
|..+|...++||.+||+.||.+|+|++|+|.||||....+...+++++
T Consensus 252 Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~r~msP 299 (411)
T KOG0599|consen 252 WADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQARQMSP 299 (411)
T ss_pred hhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhcccccCC
Confidence 999999999999999999999999999999999997654444444444
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-53 Score=425.26 Aligned_cols=258 Identities=42% Similarity=0.708 Sum_probs=235.3
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH--HhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR--EDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...|.+++.||+|+||+|+.|.+..++..||+|++.+...... ...+.+.+|+.+++.++.||||+++++++.....+
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 3569999999999999999999999999999998876533211 34566779999999998899999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCC-CcEEEeeCCCcccc-
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD-FSLKAIDFGLSVFF- 253 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~-~~~kl~DfG~~~~~- 253 (564)
|+|||||.||+|++++...+++.|..++.+++||+.||+|||++||+||||||+|||+ +.+ +++||+|||++...
T Consensus 96 ~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill---d~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL---DGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred EEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe---cCCCCCEEEeccccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999 666 89999999999987
Q ss_pred CCCCceecccCCCcccchhhhhh-c-C-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC-C
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLK-H-Y-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI-S 329 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~-~-~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-s 329 (564)
.......+.+||+.|+|||++.+ . | +.++||||+||+||.|++|+.||...+...++..|.++.+.++.. + |
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~----~~S 248 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSY----LLS 248 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCC----cCC
Confidence 46677889999999999999985 3 5 578999999999999999999999999999999999998877653 4 9
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+++++||.+||..||.+|+|+.+++.||||+..
T Consensus 249 ~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 249 PEARSLIEKMLVPDPSTRITLLEILEHPWFQKE 281 (370)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHhhChhhccC
Confidence 999999999999999999999999999999973
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-54 Score=418.74 Aligned_cols=261 Identities=32% Similarity=0.487 Sum_probs=227.5
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-eE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-CV 175 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-~~ 175 (564)
+-++|+++++||.|+||.||+|+.+.+|..||||.++++-. .-+..- -.+|+..|++|..||||+++.+++.+.+ .+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~~-nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEECM-NLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHHH-HHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 45789999999999999999999999999999999976543 333222 3579999999988999999999999888 99
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|+||||| ..+|+++++.+ +.|++..++.|+.||+.||+|+|.+|+.|||+||+|||+ .....+||+|||+|+.+.
T Consensus 86 ~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi---~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 86 YFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI---SGNDVIKIADFGLAREVR 161 (538)
T ss_pred eeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe---cccceeEecccccccccc
Confidence 9999999 67999999765 469999999999999999999999999999999999999 556789999999999999
Q ss_pred CCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc-----------------
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK----------------- 315 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~----------------- 315 (564)
....++.++.|++|+|||++.+ .|+.+.||||+|||++|+++-++.|.|.+..+.+-+|..
T Consensus 162 SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La 241 (538)
T KOG0661|consen 162 SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLA 241 (538)
T ss_pred cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHH
Confidence 9999999999999999999984 599999999999999999999999999988777666643
Q ss_pred --CCccCCC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 316 --GHIDFES-------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 316 --~~~~~~~-------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
-.+.++. ...+.++.++.+||.+||.|||.+||||.|+|+||||....
T Consensus 242 ~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 242 SAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred HHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 1111111 11244789999999999999999999999999999998643
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-52 Score=408.57 Aligned_cols=262 Identities=29% Similarity=0.451 Sum_probs=227.0
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--Ce
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--LC 174 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~ 174 (564)
..+.|+.+++||+|.||.||+|++..+|+.||+|++..... ......-..+||.||++|. ||||++|.+...+. ..
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~-HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLD-HPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcC-CCcccceeeEEEecCCce
Confidence 34669999999999999999999999999999999976543 3344556789999999997 99999999998876 78
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
+|||+|||+ -+|..++... -+|++.+++.+++||+.||+|||++||+|||||.+|||| |.+|.+||+|||+|+++
T Consensus 193 iYlVFeYMd-hDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 193 IYLVFEYMD-HDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFY 268 (560)
T ss_pred EEEEEeccc-chhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeec
Confidence 999999995 4887777653 369999999999999999999999999999999999999 89999999999999977
Q ss_pred CCCC--ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCC----
Q 008475 254 KPGQ--IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW---- 325 (564)
Q Consensus 254 ~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~---- 325 (564)
.... .++..+.|++|+|||+++| .|+.+.|+||.||||.||++|++.|.+.+..+.++.|.+-.-......|
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 6543 5788889999999999996 5999999999999999999999999999999888888653222222222
Q ss_pred ---------------------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 326 ---------------------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 326 ---------------------~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
..++..+.+|+..||..||.+|.|+.++|+|+||.....
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~ 408 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPL 408 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCC
Confidence 236788999999999999999999999999999965443
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-52 Score=426.00 Aligned_cols=280 Identities=29% Similarity=0.485 Sum_probs=252.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.++||+|+||+|+++..+.+++.+|||++++..+.....++.++.|.+|+....+||.+++++..|++..++|+|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 56999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~ 257 (564)
|||+.||++ -++++.+.+++..++.|+..|+.||.|||++||||||||.+|||+ |..|++||+|||+++... .+.
T Consensus 448 mey~~Ggdm-~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m~~g~ 523 (694)
T KOG0694|consen 448 MEYVAGGDL-MHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGMGQGD 523 (694)
T ss_pred EEecCCCcE-EEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccCCCCC
Confidence 999999994 344556789999999999999999999999999999999999999 899999999999998765 556
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
...++||||.|||||++.+ .|+.++|+|||||+|||||.|+.||.+++..+++++|......++. .+|.++.++|
T Consensus 524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~----~ls~ea~~il 599 (694)
T KOG0694|consen 524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSKEAIAIM 599 (694)
T ss_pred ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC----cccHHHHHHH
Confidence 7788999999999999995 5999999999999999999999999999999999999988777664 5899999999
Q ss_pred HHhcccCCCCCCC-----HHHHhcCCCcCCCCC--CCCCCCCHHHHHHHHhhhhhhH
Q 008475 337 RKMLCSQPSERLT-----AHEVLCHPWICENGV--APDRSLDPAVLSRLKQFSAMNK 386 (564)
Q Consensus 337 ~~~l~~dp~~R~s-----~~~vl~hp~~~~~~~--~~~~~~~~~~~~~~k~~~~~n~ 386 (564)
+++|.++|++|.. +.+|..||||+...+ ..++.+.++....++.-.+.++
T Consensus 600 ~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~~D~sn 656 (694)
T KOG0694|consen 600 RRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGPEDVSN 656 (694)
T ss_pred HHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCChhhhcc
Confidence 9999999999995 588999999998654 3355666666666665444443
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-52 Score=414.41 Aligned_cols=254 Identities=31% Similarity=0.554 Sum_probs=235.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+... .....+.+.+|++|++.|+ |||||.++++|+...++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEEE
Confidence 458899999999999999999999999999999987654 5556788999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-C
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-Q 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~ 257 (564)
.|||.| +|..+|...+.++|+.++.++.+++.||.|||+++|+|||+||.|||+ +.++.+|+||||+|+....+ .
T Consensus 80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~ 155 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTS 155 (808)
T ss_pred ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCce
Confidence 999976 999999999999999999999999999999999999999999999999 88999999999999987654 3
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
..+.+.|||.|||||++.+ .|+..+|+||+|||+|||++|++||+.....++.+.|......++. ..+..+..||
T Consensus 156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~----~~S~~f~nfl 231 (808)
T KOG0597|consen 156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS----TASSSFVNFL 231 (808)
T ss_pred eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc----cccHHHHHHH
Confidence 5667889999999999985 5999999999999999999999999999999999999887665543 6899999999
Q ss_pred HHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
..+|.+||.+|+|+.+++.|||+++.
T Consensus 232 ~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 232 QGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred HHHhhcChhhcccHHHHhcChHHhhh
Confidence 99999999999999999999999974
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-52 Score=392.52 Aligned_cols=268 Identities=30% Similarity=0.496 Sum_probs=229.3
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec----
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED---- 171 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---- 171 (564)
.+...|...+.||.|+||.|+.|.++.+|+.||||++.. .+......++..+|+.+|++++ |+||+.+.+++..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~-~F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN-PFENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPPSRD 96 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhh-hhhchHHHHHHHHHHHHHHHhc-CCCcceEEeeccccccc
Confidence 345567778999999999999999999999999999963 4556778889999999999998 9999999999865
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 172 -SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 172 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
-..+|+|+|+| +.+|.+.++.+..+++..+..++.||+.||.|+|+.+|+||||||+|+|+ +.+..+||||||+|
T Consensus 97 ~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 97 KFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICDFGLA 172 (359)
T ss_pred ccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEeccccce
Confidence 45699999999 67888888887779999999999999999999999999999999999999 67778999999999
Q ss_pred cccCC---CCceecccCCCcccchhhhh--hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc----------
Q 008475 251 VFFKP---GQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK---------- 315 (564)
Q Consensus 251 ~~~~~---~~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~---------- 315 (564)
+...+ ....+.++.|.+|+|||++. ..|+.+.||||+|||+.||++|++.|.+.+....+..|..
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL 252 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence 98753 45568899999999999987 4699999999999999999999999998876655554432
Q ss_pred -------------CCccCCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCC
Q 008475 316 -------------GHIDFES----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRS 369 (564)
Q Consensus 316 -------------~~~~~~~----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~ 369 (564)
.....+. ..++..++.+.+||.+||..||.+|+|++|+|+|||+...-...+.+
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 1111111 12457899999999999999999999999999999999865554444
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-51 Score=389.50 Aligned_cols=274 Identities=32% Similarity=0.507 Sum_probs=244.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++++.||.|.-|+||+|....++..+|+|++.+..........++..|-+||..+. ||.++.||..|+.+...|+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD-HPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD-HPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC-CCccchhhheeeccceeEEE
Confidence 44889999999999999999999999999999999988877888889999999999996 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC--
Q 008475 179 MELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-- 254 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-- 254 (564)
||||+||+|..+.+++ +.+++..++.++..++.||+|||-.|||+|||||+|||| .++|+|-|+||.++....
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccCCCC
Confidence 9999999998887664 469999999999999999999999999999999999999 889999999998753220
Q ss_pred --------------------------------C-C----------------------CceecccCCCcccchhhhhhc-C
Q 008475 255 --------------------------------P-G----------------------QIFTDVVGSPYYVAPEVLLKH-Y 278 (564)
Q Consensus 255 --------------------------------~-~----------------------~~~~~~~gt~~y~aPE~~~~~-~ 278 (564)
. . .....++||-.|+|||++.+. .
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 112346899999999999974 9
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHHHh
Q 008475 279 GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLT----AHEVL 354 (564)
Q Consensus 279 ~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s----~~~vl 354 (564)
+.++|+|+|||++||||.|..||.+.+..+++.+|......++..+ .++..++|||+++|.+||.+|+. +.||.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 9999999999999999999999999999999999999888888764 78899999999999999999998 99999
Q ss_pred cCCCcCCCCCCCCCCCCHHHHHHH
Q 008475 355 CHPWICENGVAPDRSLDPAVLSRL 378 (564)
Q Consensus 355 ~hp~~~~~~~~~~~~~~~~~~~~~ 378 (564)
+||||++..++.-+...++.+...
T Consensus 391 ~HpFF~gVnWaLir~~~PP~iP~~ 414 (459)
T KOG0610|consen 391 RHPFFEGVNWALIRCARPPEIPKP 414 (459)
T ss_pred cCccccCCChhheeccCCCcCCCc
Confidence 999999988877666655555443
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-51 Score=370.20 Aligned_cols=259 Identities=31% Similarity=0.479 Sum_probs=223.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|...++||+|.||.||+|++..+|+.||||+|+.......- .....+||+.|+.++ |+||+.++++|.....+.||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi-~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI-NRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc-cHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEE
Confidence 4688899999999999999999999999999999876543222 335678999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
+||++ .+|...++.+ ..++..+++.|+.+++.||+|||++.|+||||||.|+|+ +.+|.+||+|||+|+.+.+.
T Consensus 80 fEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi---s~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 80 FEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI---SSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred EEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE---cCCCcEEeecccchhccCCCC
Confidence 99994 5898888654 458999999999999999999999999999999999999 78899999999999988644
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCC----------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP---------- 324 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~---------- 324 (564)
...+..+.|.+|+|||.+.| +|+...||||.|||+.||+.|.+-|.+.+.-+.+..|.+.--......
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 34444588999999999985 699999999999999999999999999998888877765222222211
Q ss_pred --------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 325 --------------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 325 --------------~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
++..++++.||+.+||..||.+|+|+.|+|+|+||+...
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence 234678899999999999999999999999999999743
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-52 Score=378.79 Aligned_cols=245 Identities=28% Similarity=0.498 Sum_probs=217.6
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEE-EEecCCe-EE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKG-AYEDSLC-VH 176 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~-~~~~~~~-~~ 176 (564)
..|+|.+.||.|+||+||++.+..+|..||.|.+.-.. .+....+....|+.+|++|. |||||++++ .|.++.. ++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~-md~k~rq~~v~Ei~lLkQL~-HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM-MDAKARQDCVKEISLLKQLN-HPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhh-ccHHHHHHHHHHHHHHHhcC-CchHHHHHHHhhhccchhhH
Confidence 45999999999999999999999999999999998443 46667788999999999997 999999998 4555444 99
Q ss_pred EEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH--CC--CEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 177 IVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHS--LG--VMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~--~~--iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
||||||.+|+|.+.++. .+.++|..++.++.|++.||..||+ .+ |+||||||.||++ +.+|.+||+|||
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~gvvKLGDfG 173 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANGVVKLGDFG 173 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCCceeeccch
Confidence 99999999999998864 4569999999999999999999999 45 9999999999999 788999999999
Q ss_pred CccccCCCC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 249 LSVFFKPGQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 249 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
+++.+.... ...+.+|||.||+||++.. .|+.+|||||+||++|||+.-++||.+.+-.++-.+|.+|..... +-.
T Consensus 174 L~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~--p~~ 251 (375)
T KOG0591|consen 174 LGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPL--PDE 251 (375)
T ss_pred hHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCC--cHH
Confidence 999987654 3456899999999999985 699999999999999999999999999999999999999965422 224
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCH
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTA 350 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~ 350 (564)
.+|..+..||.-|+..||+.||+.
T Consensus 252 ~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 252 HYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HhhhHHHHHHHHHccCCcccCCCc
Confidence 689999999999999999999986
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-50 Score=376.97 Aligned_cols=262 Identities=27% Similarity=0.386 Sum_probs=221.8
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CCeE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SLCV 175 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~ 175 (564)
.+.|+.+..|++|+||.||+|+++.|++.||+|+++.......--+ ...+||.+|.+++ |||||.+-++... -+.+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPI-tsLREIniLl~~~-H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPI-TSLREINILLKAR-HPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcc-hhHHHHHHHHhcC-CCCeeeeEEEEecccccee
Confidence 3559999999999999999999999999999999986653222112 3568999999998 9999999988764 4569
Q ss_pred EEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|||||||+. +|..++..-+ +|...+++.++.|++.||+|||.+.|+||||||+|+|+ ...|.+||+|||+|+.+.
T Consensus 153 y~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLAREYG 228 (419)
T ss_pred eeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEecccchhhhhc
Confidence 999999964 7888776644 79999999999999999999999999999999999999 778999999999999876
Q ss_pred CC-CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc-------------
Q 008475 255 PG-QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI------------- 318 (564)
Q Consensus 255 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~------------- 318 (564)
.. ..++..+.|.+|+|||++.+ .|+.+.|+||+|||+.||+++++.|.+....+.++.|.+-.-
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 44 56788899999999999986 599999999999999999999999999998888887754111
Q ss_pred ------cCCCCC-------CCC--CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 319 ------DFESDP-------WPL--ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 319 ------~~~~~~-------~~~--~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
.++..+ +.. +++...+|++.+|..||.+|.|+.|.|+|+||.+...+
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p 370 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLP 370 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCC
Confidence 111111 111 45889999999999999999999999999999985543
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-50 Score=390.05 Aligned_cols=261 Identities=34% Similarity=0.588 Sum_probs=227.8
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC-----------HHhHHHHHHHHHHHHhhcCCCCccEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS-----------REDVEDVRREIQIMHHLAGHKNIVTI 165 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~~E~~~l~~l~~h~niv~~ 165 (564)
.-+.|++.+.||+|.||.|-+|++..+++.||||++.+..... ....+++++||.||++|. |||||+|
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~-H~nVV~L 173 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH-HPNVVKL 173 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC-CcCeeEE
Confidence 3456999999999999999999999999999999998765422 112468999999999998 9999999
Q ss_pred EEEEec--CCeEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcE
Q 008475 166 KGAYED--SLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSL 242 (564)
Q Consensus 166 ~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~ 242 (564)
+++..+ ...+|||+|||..|.+.. .-..+. +++.+++.|++.++.||+|||.+|||||||||+|+|+ +++|++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl---~~~g~V 249 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL---SSDGTV 249 (576)
T ss_pred EEeecCcccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE---cCCCcE
Confidence 999876 567999999999998854 333444 8999999999999999999999999999999999999 778999
Q ss_pred EEeeCCCccccCC------CCceecccCCCcccchhhhhh---c--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 008475 243 KAIDFGLSVFFKP------GQIFTDVVGSPYYVAPEVLLK---H--YGPEADVWTAGVILYILLSGVPPFWAETQQGIFD 311 (564)
Q Consensus 243 kl~DfG~~~~~~~------~~~~~~~~gt~~y~aPE~~~~---~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~ 311 (564)
||+|||.+..... .......+|||.|+|||.+.+ . .+.+.||||+||+||.|+.|+.||.+....++++
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~ 329 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFD 329 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHH
Confidence 9999999887622 223445789999999999874 2 4668999999999999999999999999999999
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 312 AVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 312 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+|....+.++.. +.+.+.++|||.+||++||++|+++.+|..|||......
T Consensus 330 KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 330 KIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred HHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 999988888765 467899999999999999999999999999999997643
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-51 Score=366.60 Aligned_cols=255 Identities=34% Similarity=0.606 Sum_probs=236.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++++.||+|.||.||+|+.+.++-.||+|++-+..+.......++.+|++|-.+|+ ||||++++++|.+...+|++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhheeccceeEEE
Confidence 45999999999999999999999999999999998877666666778999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 179 MELCAGGELFDRII--QRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+||..+|+|+..|. ...++++..+..+++|++.||.|||.++||||||||+|+|+ +..+.+||+|||-+.... .
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl---g~~~~lkiAdfGwsV~~p-~ 176 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAP-S 176 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc---CCCCCeeccCCCceeecC-C
Confidence 99999999999998 56779999999999999999999999999999999999999 778899999999998765 4
Q ss_pred CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
..-.+.|||..|+|||...+ .++..+|+|++|++.||++.|.+||...+..+++..|.+-.+.++ ..++.++.||
T Consensus 177 ~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p----~~is~~a~dl 252 (281)
T KOG0580|consen 177 NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP----STISGGAADL 252 (281)
T ss_pred CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC----cccChhHHHH
Confidence 44567899999999999986 599999999999999999999999999999999999999887776 4689999999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
|.+||.++|.+|++..|++.|||+...
T Consensus 253 I~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 253 ISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred HHHHhccCccccccHHHHhhhHHHHhc
Confidence 999999999999999999999999753
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-50 Score=372.73 Aligned_cols=267 Identities=40% Similarity=0.698 Sum_probs=240.6
Q ss_pred cccceeec-ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec----
Q 008475 97 IRDLYTLG-RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED---- 171 (564)
Q Consensus 97 ~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---- 171 (564)
+.++|.+. ++||-|-.|.|..|.++.|++.+|+|++.. ..+.++|+++--...+|||||.++++|+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--------SPKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 44567774 579999999999999999999999998853 24677899888878889999999999864
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
..++.||||.++||.|+.+++.++. ++|.++..|++||..|+.|||+.+|.||||||+|+|++.+..+-.+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 5678999999999999999998765 99999999999999999999999999999999999999888889999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHcCCccCCCCC
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAET----QQGIFDAVLKGHIDFESDP 324 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~ 324 (564)
|+.........+.+-||.|.|||++. .+|+..+|+||+||++|-||+|.+||+... ..++...|..|.+.|+.+.
T Consensus 211 AK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pE 290 (400)
T KOG0604|consen 211 AKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPE 290 (400)
T ss_pred ccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChh
Confidence 99887667778889999999999998 469999999999999999999999998754 3568889999999999999
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCC
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLD 371 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~ 371 (564)
|..+|+.++|+|+++|..+|++|+|+++++.|||+.....-+...+.
T Consensus 291 Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl~ 337 (400)
T KOG0604|consen 291 WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPLS 337 (400)
T ss_pred HhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCch
Confidence 99999999999999999999999999999999999987766655543
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-50 Score=388.47 Aligned_cols=255 Identities=34% Similarity=0.511 Sum_probs=216.0
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC--eEEEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL--CVHIV 178 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~--~~~lv 178 (564)
|..++.||+|+||.||++.+..+|...|||.+.... ....+.+.+|+.+|++|+ |||||+++|...... .++|.
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeEee
Confidence 777899999999999999999999999999986542 222778999999999998 999999999755444 69999
Q ss_pred EeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC-CCcEEEeeCCCccccCC-
Q 008475 179 MELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD-DFSLKAIDFGLSVFFKP- 255 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~-~~~~kl~DfG~~~~~~~- 255 (564)
|||+++|+|.+++...+ ++++..++.+.+||+.||.|||++|||||||||+|||+ +. ++.+||+|||++.....
T Consensus 95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl---~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL---DPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE---eCCCCeEEeccCccccccccc
Confidence 99999999999999877 79999999999999999999999999999999999999 66 68999999999987653
Q ss_pred ---CCceecccCCCcccchhhhhhcC--CCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 256 ---GQIFTDVVGSPYYVAPEVLLKHY--GPEADVWTAGVILYILLSGVPPFWA-ETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 256 ---~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
........||+.|||||++.... ..++|||||||++.||+||..||.. ......+-.+......+ .....+|
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P--~ip~~ls 249 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLP--EIPDSLS 249 (313)
T ss_pred cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCC--CCCcccC
Confidence 12234578999999999998432 3499999999999999999999987 34444444444433221 3335689
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+++++||.+|+..||++|||+.++|.|||......
T Consensus 250 ~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 250 DEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred HHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 99999999999999999999999999999987543
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-49 Score=382.72 Aligned_cols=259 Identities=31% Similarity=0.444 Sum_probs=228.6
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++...||.|..++||+|+...+++.||||++.-..+ ....+.+.+|+..|+.+. ||||++++..|..+..+|+|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc--~~~ld~l~kE~~~msl~~-HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKC--NNDLDALRKEVQTMSLID-HPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhh--hhhHHHHHHHHHHhhhcC-CCCcceEEEEEEecceeEEe
Confidence 459999999999999999999999999999999987664 344889999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 179 MELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
|.||.+|++.+.+... ..++|..+..|+++++.||.|||.+|.||||||+.|||+ +.+|.|||+|||.+..+..+
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeeccc
Confidence 9999999999999764 349999999999999999999999999999999999999 89999999999987655322
Q ss_pred -C----ceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC------C
Q 008475 257 -Q----IFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE------S 322 (564)
Q Consensus 257 -~----~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~------~ 322 (564)
. .+...+||+.|||||++.+ .|+.|+||||||++..||.+|..||....+.+++-.-+++..+.. .
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~ 259 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDK 259 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCCh
Confidence 1 2256799999999999874 499999999999999999999999999999888877777765422 2
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 323 ~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+....++..++.+|..||+.||.+|||+.++|+|+||+...
T Consensus 260 d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 260 DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK 300 (516)
T ss_pred HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence 22345678899999999999999999999999999999743
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-50 Score=399.34 Aligned_cols=257 Identities=32% Similarity=0.518 Sum_probs=226.3
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
.+....|....+||+|+.|.||.|+...+++.||||++..... ...+-+.+|+.+|+.++ |+|||.+++.|-..+.
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~~-H~NiVnfl~Sylv~de 344 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDLH-HPNIVNFLDSYLVGDE 344 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhcc-chHHHHHHHHhcccce
Confidence 4456779999999999999999999999999999999976543 23456789999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+|+||||++||+|.+.+... .++|.+++.|++.++.||+|||.+||+|||||.+|||+ +.+|.+||+|||++..+.
T Consensus 345 LWVVMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL---~~~g~vKltDFGFcaqi~ 420 (550)
T KOG0578|consen 345 LWVVMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL---TMDGSVKLTDFGFCAQIS 420 (550)
T ss_pred eEEEEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe---ccCCcEEEeeeeeeeccc
Confidence 99999999999998877554 59999999999999999999999999999999999999 778889999999998776
Q ss_pred CCC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCccCCCCCCCCCCHH
Q 008475 255 PGQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL-KGHIDFESDPWPLISDS 331 (564)
Q Consensus 255 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~s~~ 331 (564)
... .-.+.+|||.|||||++.+ .|+++.||||||++++||+-|++||..+++...+..|. +|...+. .+..+|+.
T Consensus 421 ~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk--~~~klS~~ 498 (550)
T KOG0578|consen 421 EEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLK--NPEKLSPE 498 (550)
T ss_pred cccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcC--CccccCHH
Confidence 554 4567899999999999985 69999999999999999999999999887766555554 3444433 34679999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+++||.+||+.||++|+++.++|+||||+.
T Consensus 499 ~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 499 LKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred HHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 999999999999999999999999999954
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-50 Score=381.81 Aligned_cols=257 Identities=38% Similarity=0.646 Sum_probs=242.7
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
-+.+-+|++.+.||+|.||+|-+|.+...|+.||||.|++..+.+..+.-.+++||+||..|. ||||+.++++|+..+.
T Consensus 49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN-HPhII~IyEVFENkdK 127 (668)
T KOG0611|consen 49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN-HPHIIQIYEVFENKDK 127 (668)
T ss_pred cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC-CCceeehhhhhcCCce
Confidence 345677999999999999999999999999999999999999989999999999999999996 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+.|||||..+|.|++++...+.+++.+++.+++||+.|+.|||.++++|||||.+|||+ |.++++||+|||++..+.
T Consensus 128 IvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999 889999999999999999
Q ss_pred CCCceecccCCCcccchhhhhhc--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLKH--YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
......++||+|.|.+||++++. -++.+|-|||||+||-|+.|.+||.+.+...+..+|.+|.+.-+. -+..+
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~-----~PSdA 279 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE-----TPSDA 279 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC-----CCchH
Confidence 88999999999999999999974 478999999999999999999999999999999999999876543 35678
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
.-||+.||-.||++|.|+.+|..|=|+.
T Consensus 280 ~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 280 SGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred HHHHHHHHhcCcccchhHHHHhhhheee
Confidence 8999999999999999999999998876
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-49 Score=387.49 Aligned_cols=266 Identities=33% Similarity=0.584 Sum_probs=243.4
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..+...|.+.+.||+|.|++|-+|++..+|+.||||+|.+.+.. ......+.+|++.|+.++ |||||+||++......
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD-~~st~hlfqEVRCMKLVQ-HpNiVRLYEViDTQTK 91 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD-TLSTGHLFQEVRCMKLVQ-HPNIVRLYEVIDTQTK 91 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccc-hhhhhHHHHHHHHHHHhc-CcCeeeeeehhcccce
Confidence 45677899999999999999999999999999999999988763 344567889999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
+|||+|+=.+|+|+++|.+. ..+.++.+.++++||+.|+.|||+.++|||||||+||.+. .+-|.|||.|||++..+
T Consensus 92 lyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNKF 169 (864)
T ss_pred EEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeeccccccC
Confidence 99999999999999999764 5699999999999999999999999999999999999996 56789999999999999
Q ss_pred CCCCceecccCCCcccchhhhhhc-C-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLKH-Y-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.+++..++.||+..|-|||++.+. | .+++||||||||||.|++|++||..-+..+.+-+|+...+..+. .+|.+
T Consensus 170 ~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs----hvS~e 245 (864)
T KOG4717|consen 170 QPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS----HVSKE 245 (864)
T ss_pred CCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch----hhhHH
Confidence 999999999999999999999974 5 46899999999999999999999999999999999988877664 58999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDR 368 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~ 368 (564)
+++||..||..||.+|.+.++|..|+|++........
T Consensus 246 CrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT 282 (864)
T KOG4717|consen 246 CRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLST 282 (864)
T ss_pred HHHHHHHHHhcCchhhccHHHHhccccccCCCCCccc
Confidence 9999999999999999999999999999986654443
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-49 Score=396.80 Aligned_cols=254 Identities=32% Similarity=0.583 Sum_probs=228.6
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.++..+|+|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEcCCEEEEE
Confidence 55999999999999999999999999999999997654444455677899999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~- 172 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDRT- 172 (329)
T ss_pred EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCCCc-
Confidence 9999999999999988899999999999999999999999999999999999999 778899999999998754332
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....++.+..+...++ ..++..+++||.
T Consensus 173 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~ 247 (329)
T PTZ00263 173 -FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFP----NWFDGRARDLVK 247 (329)
T ss_pred -ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCC----CCCCHHHHHHHH
Confidence 34679999999999985 489999999999999999999999999988888888888765543 347899999999
Q ss_pred HhcccCCCCCCC-----HHHHhcCCCcCCC
Q 008475 338 KMLCSQPSERLT-----AHEVLCHPWICEN 362 (564)
Q Consensus 338 ~~l~~dp~~R~s-----~~~vl~hp~~~~~ 362 (564)
+||+.||.+||+ +++++.||||.+.
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 999999999997 7999999999863
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-50 Score=370.63 Aligned_cols=266 Identities=36% Similarity=0.642 Sum_probs=237.9
Q ss_pred cccccceee-cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 95 DNIRDLYTL-GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 95 ~~~~~~y~~-~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
..|.+.|++ .+.||+|+||.|-.|....+|.+||||+|.+. ......++.+|++++.++++|+||++|+++|+++.
T Consensus 73 g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 73 GKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred chHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 345666777 56799999999999999999999999999876 34556788999999999999999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.+|||||-|.||.|+.+|+++..+++.++..+.+.|+.||.+||.+||.||||||+|||...++.-.-+|||||.+..-+
T Consensus 150 ~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~ 229 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGI 229 (463)
T ss_pred eEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999987777778999999886543
Q ss_pred CCC--------CceecccCCCcccchhhhh---h---cCCCcchHHHHHHHHHHHHhCCCCCCCCC--------------
Q 008475 254 KPG--------QIFTDVVGSPYYVAPEVLL---K---HYGPEADVWTAGVILYILLSGVPPFWAET-------------- 305 (564)
Q Consensus 254 ~~~--------~~~~~~~gt~~y~aPE~~~---~---~~~~~~DvwSlG~il~elltg~~pf~~~~-------------- 305 (564)
... ....+.+|+..|||||+.. + .|+.++|.||||||||-||+|.+||.+.-
T Consensus 230 k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~ 309 (463)
T KOG0607|consen 230 KLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRV 309 (463)
T ss_pred ccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHH
Confidence 211 2344578899999999874 2 48999999999999999999999995532
Q ss_pred -HHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 306 -QQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 306 -~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+..+++.|..|.+.|+...|..+|.++++||..+|..|+..|.++.++++|||+..-.
T Consensus 310 CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~ 368 (463)
T KOG0607|consen 310 CQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA 368 (463)
T ss_pred HHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence 4678999999999999999999999999999999999999999999999999998643
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-49 Score=390.30 Aligned_cols=253 Identities=30% Similarity=0.515 Sum_probs=226.8
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+. ||||+++++++.+...+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC-CCcHhhhHhhhccCCeEEEEE
Confidence 5889999999999999999999999999999997654333445667889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF 259 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~ 259 (564)
||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...... .
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli---~~~~~~kl~Dfg~~~~~~~~--~ 155 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDR--T 155 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEEecCcchhccCC--c
Confidence 999999999999888899999999999999999999999999999999999999 67789999999998865432 2
Q ss_pred ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 338 (564)
...+|++.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+..+...++. .+++.+++||.+
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~li~~ 231 (291)
T cd05612 156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLYAKDLIKK 231 (291)
T ss_pred ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc----cCCHHHHHHHHH
Confidence 34678999999999875 4899999999999999999999999999888888888887665543 468999999999
Q ss_pred hcccCCCCCCC-----HHHHhcCCCcCCC
Q 008475 339 MLCSQPSERLT-----AHEVLCHPWICEN 362 (564)
Q Consensus 339 ~l~~dp~~R~s-----~~~vl~hp~~~~~ 362 (564)
||..||.+||+ ++++++||||...
T Consensus 232 ~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 232 LLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred HcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 99999999995 9999999999763
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-48 Score=398.61 Aligned_cols=260 Identities=30% Similarity=0.515 Sum_probs=224.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||+||+|.+..+++.||+|++.+...........+..|+.++..+. ||||+++++.+.+...+|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~-~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD-SLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCeEEEE
Confidence 35889999999999999999999999999999997654444555677889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi---~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL---DSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCCEEEeeccCccccccccc
Confidence 9999999999999988899999999999999999999999999999999999999 778899999999987543210
Q ss_pred -----------------------------------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCC
Q 008475 258 -----------------------------------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPF 301 (564)
Q Consensus 258 -----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf 301 (564)
.....+||+.|+|||++.+ .++.++|||||||++|||++|..||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 1124579999999999975 5899999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCC---CCCCHHHHhcCCCcCCCC
Q 008475 302 WAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPS---ERLTAHEVLCHPWICENG 363 (564)
Q Consensus 302 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~---~R~s~~~vl~hp~~~~~~ 363 (564)
.+.+..+.+..+.........+....+++++++||.+|+. +|. .||+++++++||||....
T Consensus 237 ~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~ 300 (363)
T cd05628 237 CSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVD 300 (363)
T ss_pred CCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCC
Confidence 9998888888887654333333334578999999999875 444 468999999999998743
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-48 Score=394.13 Aligned_cols=250 Identities=33% Similarity=0.545 Sum_probs=222.9
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+.+++++. ||||+++++++.....+||||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997655444555667889999999997 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~~~~~~~ 263 (564)
++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.... ........+
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 156 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCcccccCCCccccee
Confidence 9999999888899999999999999999999999999999999999999 778899999999987532 223334567
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
||+.|+|||++.+ .++.++|||||||++|||++|..||...+.......+..+...++ ..+++++.+||.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999975 589999999999999999999999999888888888877665544 35899999999999999
Q ss_pred CCCCCC-----CHHHHhcCCCcCCC
Q 008475 343 QPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 343 dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
||++|| ++.++++||||...
T Consensus 233 dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 233 DPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred CHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 999999 89999999999764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-48 Score=395.92 Aligned_cols=262 Identities=29% Similarity=0.429 Sum_probs=222.8
Q ss_pred cccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCC-----CCccEEEE
Q 008475 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH-----KNIVTIKG 167 (564)
Q Consensus 93 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~niv~~~~ 167 (564)
..+.+..+|.+.+.||+|+||.|.+|.+..|++.||||++++. .....+...|+.+|..|+.| -|+|++++
T Consensus 180 ~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d 255 (586)
T KOG0667|consen 180 VNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLD 255 (586)
T ss_pred ecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeee
Confidence 4456666899999999999999999999999999999999864 45667788899999999833 48999999
Q ss_pred EEecCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEe
Q 008475 168 AYEDSLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAI 245 (564)
Q Consensus 168 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~ 245 (564)
+|...+++|||+|++ ..+|+++++.++ .++...++.+++||+.||..||++||||+||||+||||...... .|||+
T Consensus 256 ~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~-~vKVI 333 (586)
T KOG0667|consen 256 YFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRS-RIKVI 333 (586)
T ss_pred ccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcC-ceeEE
Confidence 999999999999999 679999998864 58899999999999999999999999999999999999765444 89999
Q ss_pred eCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------
Q 008475 246 DFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH------- 317 (564)
Q Consensus 246 DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~------- 317 (564)
|||+|+.....- .+++.++.|+|||++.| .|+.+.||||||||++||++|.+.|.+.+..+.+..|..-.
T Consensus 334 DFGSSc~~~q~v--ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~m 411 (586)
T KOG0667|consen 334 DFGSSCFESQRV--YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKM 411 (586)
T ss_pred ecccccccCCcc--eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999999855433 37899999999999997 69999999999999999999999999999888777664300
Q ss_pred --------ccCCC-----------C---------------------CCC------------CCCHHHHHHHHHhcccCCC
Q 008475 318 --------IDFES-----------D---------------------PWP------------LISDSAKDLIRKMLCSQPS 345 (564)
Q Consensus 318 --------~~~~~-----------~---------------------~~~------------~~s~~~~~li~~~l~~dp~ 345 (564)
.-+.. . ..+ .-...+.+||.+||.+||.
T Consensus 412 L~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~ 491 (586)
T KOG0667|consen 412 LDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPA 491 (586)
T ss_pred HHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCch
Confidence 00000 0 000 1124679999999999999
Q ss_pred CCCCHHHHhcCCCcCCC
Q 008475 346 ERLTAHEVLCHPWICEN 362 (564)
Q Consensus 346 ~R~s~~~vl~hp~~~~~ 362 (564)
+|+|+.++|+||||...
T Consensus 492 ~R~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 492 ERITPAQALNHPFLTGT 508 (586)
T ss_pred hcCCHHHHhcCcccccc
Confidence 99999999999999954
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-48 Score=402.13 Aligned_cols=259 Identities=29% Similarity=0.553 Sum_probs=226.4
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|++..+++.||||++.+...........+.+|+.+++.+. ||||+++++++.+...+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD-NPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCeEEEEE
Confidence 5899999999999999999999999999999997654444455667889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
|||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceeccccccc
Confidence 999999999999888889999999999999999999999999999999999999 778899999999986542211
Q ss_pred -------------------------------------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCC
Q 008475 258 -------------------------------------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVP 299 (564)
Q Consensus 258 -------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~ 299 (564)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 0112469999999999874 58999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCCCcCCCC
Q 008475 300 PFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLT---AHEVLCHPWICENG 363 (564)
Q Consensus 300 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s---~~~vl~hp~~~~~~ 363 (564)
||...+..+....+......+..+....+++++.+||.+||. +|.+|++ +.+++.||||+...
T Consensus 238 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~ 303 (364)
T cd05599 238 PFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVD 303 (364)
T ss_pred CCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence 999988888888777655444433334579999999999996 9999998 99999999998743
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-48 Score=383.32 Aligned_cols=259 Identities=29% Similarity=0.445 Sum_probs=218.4
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++++. |+||+++++++.+....++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN-SRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEEEEEccCCeEEEEEE
Confidence 778899999999999999999999999999987654433344456788999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 181 LCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 181 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|+++|+|...+... ..+++..+..++.|++.||.|||++||+||||||+|||+ ++++.+||+|||++........
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCCCe
Confidence 99999998877543 368999999999999999999999999999999999999 7778999999999987655555
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
.....||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........+..............+++++.+||+
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 237 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICR 237 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHH
Confidence 556789999999999974 6999999999999999999999999876543322222221111222233458999999999
Q ss_pred HhcccCCCCCCC-----HHHHhcCCCcCCCC
Q 008475 338 KMLCSQPSERLT-----AHEVLCHPWICENG 363 (564)
Q Consensus 338 ~~l~~dp~~R~s-----~~~vl~hp~~~~~~ 363 (564)
+||..||.+||+ ++++++||||.+..
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 238 MLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred HHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 999999999997 89999999998743
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-48 Score=392.43 Aligned_cols=255 Identities=33% Similarity=0.571 Sum_probs=227.0
Q ss_pred cceeecccccccCCeEEEEEEEccCC-cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATG-IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
+.|++.+.||+|+||.||+|.+..++ ..||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+...+|+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN-HPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCCcceEEEEEeCCEEEE
Confidence 45999999999999999999876655 689999997655444455677889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~~~~- 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDTR- 184 (340)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeecCCC-
Confidence 99999999999999988899999999999999999999999999999999999999 77889999999999875432
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
....+||+.|+|||++.+ .++.++|||||||++|||++|..||.+.+.......+..+...++ ..+++.+.++|
T Consensus 185 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li 259 (340)
T PTZ00426 185 -TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP----KFLDNNCKHLM 259 (340)
T ss_pred -cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHH
Confidence 245679999999999975 489999999999999999999999999988888888888766544 34789999999
Q ss_pred HHhcccCCCCCC-----CHHHHhcCCCcCCCC
Q 008475 337 RKMLCSQPSERL-----TAHEVLCHPWICENG 363 (564)
Q Consensus 337 ~~~l~~dp~~R~-----s~~~vl~hp~~~~~~ 363 (564)
++||..||++|+ +++++++||||.+..
T Consensus 260 ~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~ 291 (340)
T PTZ00426 260 KKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID 291 (340)
T ss_pred HHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 999999999995 899999999998643
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-48 Score=391.47 Aligned_cols=257 Identities=32% Similarity=0.467 Sum_probs=226.5
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+. ||||+++++++.....+||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEEE
Confidence 5899999999999999999999999999999997654433445667889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF 259 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~ 259 (564)
||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ..
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~--~~ 155 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVT--YA 155 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCccccc--cc
Confidence 999999999999888889999999999999999999999999999999999999 7788999999999986543 33
Q ss_pred ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCC----CCCCHHHHH
Q 008475 260 TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW----PLISDSAKD 334 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~----~~~s~~~~~ 334 (564)
....||+.|+|||++.+ .++.++|||||||++|||++|..||...+..+....+.........+.. ..+++++.+
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~ 235 (333)
T cd05600 156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWD 235 (333)
T ss_pred CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHH
Confidence 45679999999999985 5899999999999999999999999998888877777654332222221 256899999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
||.+||..+|.+||++.++++||||...
T Consensus 236 li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 236 LITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred HHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 9999999999999999999999999864
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-47 Score=395.74 Aligned_cols=260 Identities=31% Similarity=0.524 Sum_probs=222.3
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.+. ||||+++++++.+...+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC-CCCeeeeEEEEecCCEEEEEE
Confidence 4888999999999999999999999999999998765555566778999999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC---
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG--- 256 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~--- 256 (564)
|||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili---~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE---CCCCCEEEeeCcCCccccccccc
Confidence 999999999999888889999999999999999999999999999999999999 77889999999987532100
Q ss_pred ---------------------------------------------CceecccCCCcccchhhhhh-cCCCcchHHHHHHH
Q 008475 257 ---------------------------------------------QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVI 290 (564)
Q Consensus 257 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~i 290 (564)
......+||+.|+|||++.+ .++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 00123579999999999874 58999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc--CCCCCCCHHHHhcCCCcCCCC
Q 008475 291 LYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS--QPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 291 l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~--dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+|||++|..||...+..+....+.........+....+++++.+||.+||.. +|..|+++.++++||||....
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~ 312 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVD 312 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCC
Confidence 9999999999998887766666654433333334446899999999996654 455599999999999998643
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-48 Score=400.78 Aligned_cols=259 Identities=29% Similarity=0.521 Sum_probs=222.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|.+..+++.||||++.+.........+.+.+|+++++.+. ||||+++++++.+...+||||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD-SPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCeeEEEE
Confidence 5889999999999999999999999999999987654434455677889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
||++||+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll---~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEEeeccccccccccccc
Confidence 999999999999888889999999999999999999999999999999999999 778899999999986321100
Q ss_pred ----------------------------------------------ceecccCCCcccchhhhhh-cCCCcchHHHHHHH
Q 008475 258 ----------------------------------------------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVI 290 (564)
Q Consensus 258 ----------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~i 290 (564)
.....+||+.|+|||++.+ .++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 0012469999999999875 59999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCC---CCHHHHhcCCCcCCCC
Q 008475 291 LYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSER---LTAHEVLCHPWICENG 363 (564)
Q Consensus 291 l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R---~s~~~vl~hp~~~~~~ 363 (564)
+|||++|.+||.+....+.+..+.........+....++.++.+||.+||. +|.+| +++.+++.||||....
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~ 312 (377)
T cd05629 238 MFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVD 312 (377)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence 999999999999888877777776544333333334578999999999997 77665 5999999999998643
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-47 Score=385.61 Aligned_cols=248 Identities=31% Similarity=0.553 Sum_probs=221.0
Q ss_pred ccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCCc
Q 008475 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGE 186 (564)
Q Consensus 107 lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 186 (564)
||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++++. ||||+++++++......|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 799999999999999999999999997654444556677889999999997 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CCceecccCC
Q 008475 187 LFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTDVVGS 265 (564)
Q Consensus 187 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~~~~~~~gt 265 (564)
|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......+||
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 156 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCGT 156 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCCccccccCC
Confidence 99999888889999999999999999999999999999999999999 7788999999999875432 2233456799
Q ss_pred Ccccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCC
Q 008475 266 PYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQP 344 (564)
Q Consensus 266 ~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp 344 (564)
+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+..+...++ ..+++++.+||.+||..||
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dp 232 (312)
T cd05585 157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DGFDRDAKDLLIGLLSRDP 232 (312)
T ss_pred cccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHcCCCH
Confidence 99999999985 589999999999999999999999999888888888877655443 3588999999999999999
Q ss_pred CCCC---CHHHHhcCCCcCCC
Q 008475 345 SERL---TAHEVLCHPWICEN 362 (564)
Q Consensus 345 ~~R~---s~~~vl~hp~~~~~ 362 (564)
.+|| ++.++|.||||...
T Consensus 233 ~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 233 TRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHcCCCCCHHHHHcCCCcCCC
Confidence 9997 57999999999864
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-49 Score=385.18 Aligned_cols=272 Identities=27% Similarity=0.419 Sum_probs=233.5
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|+..+.||.|+||.||+|.+..+++.||+|++.-.. ....++.+.+|+.+|.+++ ++||.++|+.|..+..++|+|
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~-~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcC-cchHHhhhhheeecccHHHHH
Confidence 4777899999999999999999999999999997655 4556778999999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-c
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-I 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-~ 258 (564)
|||.||++.+.+...+.+.+..+..++++++.||.|||..+.+|||||+.|||+ ...|.+||+|||.+....... .
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~---s~~g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL---SESGDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeE---eccCcEEEEecceeeeeechhhc
Confidence 999999999999888778999999999999999999999999999999999999 566899999999998765543 2
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
..+++|||.|||||++.+ .|+.++||||||++.+||++|.+||....+..++-.|-+..++ ..-..+|+.+++||.
T Consensus 168 r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP---~L~~~~S~~~kEFV~ 244 (467)
T KOG0201|consen 168 RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPP---RLDGDFSPPFKEFVE 244 (467)
T ss_pred cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCC---ccccccCHHHHHHHH
Confidence 367999999999999996 6999999999999999999999999888875555444433222 222368999999999
Q ss_pred HhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhh
Q 008475 338 KMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSA 383 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~ 383 (564)
.||.+||+.||+|.++|+|+|++. ....+.-.+++.+.+++..
T Consensus 245 ~CL~k~P~~RpsA~~LLKh~FIk~---a~k~s~L~~~i~r~~~~~~ 287 (467)
T KOG0201|consen 245 ACLDKNPEFRPSAKELLKHKFIKR---AKKTSELKELIDRYKRWRV 287 (467)
T ss_pred HHhhcCcccCcCHHHHhhhHHHHh---cCCchHHHHHHHHHHHHhh
Confidence 999999999999999999999987 2233334455555555544
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=365.91 Aligned_cols=260 Identities=28% Similarity=0.424 Sum_probs=221.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCC-ccEEEEEEecCC----
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN-IVTIKGAYEDSL---- 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n-iv~~~~~~~~~~---- 173 (564)
..|..+++||+|+||+||+|+.+.+|+.||+|++.-.... +-.-....+|+.+|+.|+ |+| |+.+++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhC-CCcceEEEEeeeeecccccc
Confidence 4477888999999999999999999999999999754321 112345678999999998 999 999999998877
Q ss_pred --eEEEEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 174 --CVHIVMELCAGGELFDRIIQRG----HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 174 --~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
.+++|+||+ .-+|..++...+ .++...++.+++||+.||+|||+++|+||||||+|||+ ++.|.+||+||
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi---~~~G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI---SSSGVLKLADF 164 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE---CCCCcEeeecc
Confidence 899999999 568999887754 57889999999999999999999999999999999999 77899999999
Q ss_pred CCccccC-CCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCC
Q 008475 248 GLSVFFK-PGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP 324 (564)
Q Consensus 248 G~~~~~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 324 (564)
|+|+... +...+++.++|.+|+|||++.+ .|+...||||+|||++||+++++.|.+.+..+.+..|.+-.-......
T Consensus 165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 9999776 5556788899999999999986 499999999999999999999999999998887777754221111111
Q ss_pred C--------------------------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 325 W--------------------------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 325 ~--------------------------~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
| +..++...+++.+||+.+|.+|.|++.+|.||||.....
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 1 123458899999999999999999999999999998643
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-47 Score=396.25 Aligned_cols=258 Identities=33% Similarity=0.554 Sum_probs=224.2
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|+++++||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+. ||||+++++.+.+...+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~-h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC-CCcCCeEEEEEEeCCEEEEEE
Confidence 4889999999999999999999999999999997655444556678899999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC---
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG--- 256 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~--- 256 (564)
|||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCccccccccc
Confidence 999999999999888889999999999999999999999999999999999999 77889999999997532100
Q ss_pred ---------------------------------------------CceecccCCCcccchhhhhh-cCCCcchHHHHHHH
Q 008475 257 ---------------------------------------------QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVI 290 (564)
Q Consensus 257 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~i 290 (564)
......+||+.|+|||++.+ .|+.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 00123578999999999975 59999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCCCcCCC
Q 008475 291 LYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLT---AHEVLCHPWICEN 362 (564)
Q Consensus 291 l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s---~~~vl~hp~~~~~ 362 (564)
+|||++|++||.+.+..+....+.........+....+++++.+||.+|+ .+|.+|++ ++++++||||+..
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 99999999999998887777777665444444445568999999999986 59999997 9999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-47 Score=382.40 Aligned_cols=246 Identities=30% Similarity=0.402 Sum_probs=213.4
Q ss_pred eeecccccccCCeEEEEEEEccCCcE-EEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-eEEEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIE-FACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-CVHIV 178 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~-vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-~~~lv 178 (564)
..+.+.||.|+||+||+|.+. |.. ||+|++......... .+.+.+|+.+|.+++ |||||+++|++.... .++||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~-HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLR-HPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred hhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCceEEE
Confidence 445667999999999999964 555 999999876654444 789999999999998 999999999999887 79999
Q ss_pred EeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEeecCCCCcEEeecCCCCC-cEEEeeCCCccccC
Q 008475 179 MELCAGGELFDRIIQ--RGHYSERKAAELTRIIVGVVEACHSLG-VMHRDLKPENFLLVNKDDDF-SLKAIDFGLSVFFK 254 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~Dlkp~NIll~~~~~~~-~~kl~DfG~~~~~~ 254 (564)
|||+++|+|.+++.. .+.++...+..|+.+|+.||+|||+++ ||||||||+|||+ +.++ ++||+|||+++...
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv---~~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV---DLKGKTLKIADFGLSREKV 195 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE---cCCCCEEEECCCccceeec
Confidence 999999999999988 678999999999999999999999999 9999999999999 7776 99999999998766
Q ss_pred CC-CceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PG-QIFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~-~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.. ...+...||+.|||||++.+ .|+.|+||||||+++|||+||+.||.+....++...+..+......+ ..+++
T Consensus 196 ~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p--~~~~~ 273 (362)
T KOG0192|consen 196 ISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP--KECPP 273 (362)
T ss_pred cccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--ccCCH
Confidence 54 34445789999999999994 39999999999999999999999999988877666665444333322 23889
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+..||.+||..||..||++.+++.
T Consensus 274 ~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 274 HLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred HHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 9999999999999999999988764
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-47 Score=386.72 Aligned_cols=250 Identities=31% Similarity=0.540 Sum_probs=221.8
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.+. ||||+++++++.....+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR-HPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997655444556677889999999997 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~~~~~~~ 263 (564)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......+
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 156 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAATMKTFC 156 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---CCCCcEEEecCcCCccCCCccccccccc
Confidence 9999999888889999999999999999999999999999999999999 7788999999999875332 22334567
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..+....+..+...++ ..+++++.+||.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP----RTLSADAKSLLSGLLIK 232 (328)
T ss_pred CCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----CCCCHHHHHHHHHHcCC
Confidence 9999999999974 589999999999999999999999998888888777776655443 35789999999999999
Q ss_pred CCCCCC-----CHHHHhcCCCcCCC
Q 008475 343 QPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 343 dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
||.+|+ ++.++++||||...
T Consensus 233 dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred CHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 999997 89999999999763
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-47 Score=385.48 Aligned_cols=251 Identities=31% Similarity=0.537 Sum_probs=222.2
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|++..+++.||+|++.+.........+.+..|+.++..+.+||||+++++++.+...+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999997654334445667788999998876799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~~~~~~~ 263 (564)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... .........
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFC 157 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCCcccccc
Confidence 9999999888899999999999999999999999999999999999999 778899999999987542 223334567
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+++..+..+...++ ..+++++.+||.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~L~~ 233 (320)
T cd05590 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLSQDAVDILKAFMTK 233 (320)
T ss_pred cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccc
Confidence 9999999999975 589999999999999999999999999998888888887765443 34789999999999999
Q ss_pred CCCCCCCH------HHHhcCCCcCCC
Q 008475 343 QPSERLTA------HEVLCHPWICEN 362 (564)
Q Consensus 343 dp~~R~s~------~~vl~hp~~~~~ 362 (564)
||.+||++ ++++.||||...
T Consensus 234 dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 234 NPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 99999998 999999999764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-48 Score=368.43 Aligned_cols=252 Identities=31% Similarity=0.456 Sum_probs=215.4
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC-----CeE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS-----LCV 175 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-----~~~ 175 (564)
|.-.+++|.|+||.||.|....+++.||||++-.+.. --.+|+++|+.+. |||||++.-+|... -+.
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-------~knrEl~im~~l~-HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-------YKNRELQIMRKLD-HPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-------cCcHHHHHHHhcC-CcCeeeEEEEEEecCCCchhHH
Confidence 7778999999999999999999999999998865432 1236999999887 99999999888632 256
Q ss_pred EEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 176 HIVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
.+||||++ .+|++.+.. +.+++...++.+..||++||.|||+.||+||||||.|||++ .+.|.+||||||.|+
T Consensus 98 nlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 98 NLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccCCcce
Confidence 78999994 699988875 56799999999999999999999999999999999999994 355899999999999
Q ss_pred ccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc------------CC
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK------------GH 317 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~------------~~ 317 (564)
....++...+++.|+.|+|||.+.+ .|+.+.||||.||++.||+-|++.|.+.+..+.+..|.+ ..
T Consensus 175 ~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn 254 (364)
T KOG0658|consen 175 VLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMN 254 (364)
T ss_pred eeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcC
Confidence 9998888888999999999999985 599999999999999999999999999887776666543 00
Q ss_pred --------ccCCCC-----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 318 --------IDFESD-----PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 318 --------~~~~~~-----~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
..+... .....++++.+|+.++|..+|.+|.++.|+|.||||....
T Consensus 255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 011111 1234789999999999999999999999999999999754
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-47 Score=385.30 Aligned_cols=250 Identities=33% Similarity=0.549 Sum_probs=221.7
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|++..+|..||+|++.+...........+.+|+.+++.+. ||||+++++++.....+||||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444555667888999999997 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~~~~~~~ 263 (564)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 156 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 7778999999999875322 22334567
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
||+.|+|||++.+ .++.++|||||||++|+|++|+.||...+.......+......++ ..+++++.+||.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKK 232 (323)
T ss_pred CCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999874 589999999999999999999999998888888887776655443 35789999999999999
Q ss_pred CCCCCC-----CHHHHhcCCCcCCC
Q 008475 343 QPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 343 dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
||.+|| ++.++++||||.+.
T Consensus 233 dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred CHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 999998 89999999999874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=394.92 Aligned_cols=258 Identities=30% Similarity=0.526 Sum_probs=223.5
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+. ||||+++++.+.+++.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCEEEEEE
Confidence 4899999999999999999999999999999997654433445667889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC---
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG--- 256 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~--- 256 (564)
|||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCccccccccc
Confidence 999999999999888889999999999999999999999999999999999999 77889999999997432100
Q ss_pred -----------------------------------------CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHH
Q 008475 257 -----------------------------------------QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYIL 294 (564)
Q Consensus 257 -----------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~el 294 (564)
......+||+.|+|||++.+ .++.++|||||||++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 00123579999999999985 589999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCCCcCCC
Q 008475 295 LSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL---TAHEVLCHPWICEN 362 (564)
Q Consensus 295 ltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~---s~~~vl~hp~~~~~ 362 (564)
++|+.||.+....+....+.........+....+++++.+||.+|+ .+|.+|+ ++.++++||||+..
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 9999999998887777777655444444444568999999999987 5999999 99999999999863
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-47 Score=390.60 Aligned_cols=259 Identities=32% Similarity=0.505 Sum_probs=226.0
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|++..++..||+|++.+.........+.+..|+.+++.+. ||||+++++++.+...+|+|
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN-SEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCEEEEE
Confidence 56999999999999999999999999999999997654434444556788999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 122 ~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~~~~ 197 (370)
T cd05596 122 MEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDANGM 197 (370)
T ss_pred EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccCCCc
Confidence 999999999988754 468999999999999999999999999999999999999 778899999999997654332
Q ss_pred -ceecccCCCcccchhhhhh-----cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 258 -IFTDVVGSPYYVAPEVLLK-----HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~~-----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.....+||+.|+|||++.+ .++.++|||||||++|||++|..||.+.+....+..+.........+....+|.+
T Consensus 198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 277 (370)
T cd05596 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQ 277 (370)
T ss_pred ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHH
Confidence 2235679999999999863 3788999999999999999999999999888888888776544444444568999
Q ss_pred HHHHHHHhcccCCCC--CCCHHHHhcCCCcCCC
Q 008475 332 AKDLIRKMLCSQPSE--RLTAHEVLCHPWICEN 362 (564)
Q Consensus 332 ~~~li~~~l~~dp~~--R~s~~~vl~hp~~~~~ 362 (564)
+.+||.+||..+|.+ |++++++++||||+..
T Consensus 278 ~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 278 AKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 999999999999988 9999999999999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-47 Score=383.33 Aligned_cols=251 Identities=28% Similarity=0.509 Sum_probs=222.6
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
++||+|+||.||+|++..+++.||+|++.+.........+.+..|.+++..+.+||||+++++++.+...+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999999999999999997654444455667788999998876799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~~~~~~~ 263 (564)
++|...+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... .........
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTFC 157 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCccccccc
Confidence 9999999888889999999999999999999999999999999999999 778899999999987543 223334567
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
||+.|+|||++.+ .++.++|||||||++|+|++|+.||...+..+.+..+..+...++ ..++.++.+||.+||..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ll~~~L~~ 233 (321)
T cd05591 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP----VWLSKEAVSILKAFMTK 233 (321)
T ss_pred cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhcc
Confidence 9999999999875 589999999999999999999999999999889988887765443 34789999999999999
Q ss_pred CCCCCC-------CHHHHhcCCCcCCC
Q 008475 343 QPSERL-------TAHEVLCHPWICEN 362 (564)
Q Consensus 343 dp~~R~-------s~~~vl~hp~~~~~ 362 (564)
||++|| ++.++++||||...
T Consensus 234 dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 234 NPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred CHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 999999 99999999999763
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-47 Score=382.71 Aligned_cols=256 Identities=27% Similarity=0.459 Sum_probs=225.7
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|++..+++.||+|++.+.........+.+..|+.++..+..|++|+.+++++.+.+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 38889999999999999999999999999999976544344556778889999999975567899999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCCc
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQI 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~~ 258 (564)
||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---cCCCCEEEeecCcceecCCCCCc
Confidence 999999999999888889999999999999999999999999999999999999 777899999999986532 2233
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+..+.+..+......++ ..+++++.++|.
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~ 233 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK 233 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence 445679999999999985 589999999999999999999999999988888888887665443 357899999999
Q ss_pred HhcccCCCCCCCH-----HHHhcCCCcCCC
Q 008475 338 KMLCSQPSERLTA-----HEVLCHPWICEN 362 (564)
Q Consensus 338 ~~l~~dp~~R~s~-----~~vl~hp~~~~~ 362 (564)
+||..||.+|++. +++++||||...
T Consensus 234 ~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 234 GLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999999986 899999999763
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=391.36 Aligned_cols=258 Identities=34% Similarity=0.607 Sum_probs=227.1
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|.+.+.||+|+||.||+|++..+++.||+|++.+...........+..|+.++..+. ||||+++++++.++..+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD-SPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC-CCCccchhhheecCCeEEEEE
Confidence 5899999999999999999999999999999997655434455677889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCcccCcc
Confidence 999999999999888889999999999999999999999999999999999999 778899999999987654332
Q ss_pred ----------------------------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH
Q 008475 258 ----------------------------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQG 308 (564)
Q Consensus 258 ----------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~ 308 (564)
......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~ 237 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE 237 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence 2234678999999999985 58999999999999999999999999988888
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-HHHHhcCCCcCCC
Q 008475 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLT-AHEVLCHPWICEN 362 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s-~~~vl~hp~~~~~ 362 (564)
....+.........+....+++++.+||.+||. ||.+||+ +.++++||||+..
T Consensus 238 ~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 238 TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 777777633333333334579999999999997 9999999 9999999999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-47 Score=388.36 Aligned_cols=262 Identities=31% Similarity=0.477 Sum_probs=225.0
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.+. ||||+++++++.++..+|
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEE
Confidence 3466999999999999999999999999999999997644434444566788999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+|||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 120 MVMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceecccC
Confidence 99999999999998865 468999999999999999999999999999999999999 77889999999999876433
Q ss_pred C--ceecccCCCcccchhhhhh-----cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 257 Q--IFTDVVGSPYYVAPEVLLK-----HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 257 ~--~~~~~~gt~~y~aPE~~~~-----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
. .....+||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.+....+..+......+..+....++
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s 275 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEIS 275 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCC
Confidence 2 2235679999999999974 27889999999999999999999999998888888887655444433334679
Q ss_pred HHHHHHHHHhcccCCCC--CCCHHHHhcCCCcCCCC
Q 008475 330 DSAKDLIRKMLCSQPSE--RLTAHEVLCHPWICENG 363 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~--R~s~~~vl~hp~~~~~~ 363 (564)
..++++|.+||..+|.+ |+++.++++||||+...
T Consensus 276 ~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~ 311 (370)
T cd05621 276 KHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQ 311 (370)
T ss_pred HHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCC
Confidence 99999999999865544 89999999999998743
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-47 Score=382.77 Aligned_cols=250 Identities=27% Similarity=0.482 Sum_probs=216.0
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
++||+|+||.||+|++..+++.||+|++.+.........+.+..|+.+++.+.+||||+++++++.+...+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999998765445556677889999999997799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc-CCCCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~-~~~~~~~~~~ 263 (564)
|+|..++...+++++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++... .........+
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEECcCccccccccCCCcccccc
Confidence 9999999888899999999999999999999999999999999999999 77789999999998753 2333445578
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC---------CHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE---------TQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
||+.|+|||++.+ .++.++|||||||++|+|++|+.||... ......+.+..+....+ ..++.++.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~ 233 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAS 233 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC----CCCCHHHH
Confidence 9999999999985 5899999999999999999999999531 11224455555544433 35789999
Q ss_pred HHHHHhcccCCCCCCC------HHHHhcCCCcCC
Q 008475 334 DLIRKMLCSQPSERLT------AHEVLCHPWICE 361 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s------~~~vl~hp~~~~ 361 (564)
+||.+||+.||.+||+ ++++++||||..
T Consensus 234 ~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 9999999999999997 789999999975
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-47 Score=390.03 Aligned_cols=259 Identities=31% Similarity=0.521 Sum_probs=224.1
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|.+..+++.||+|++.............+..|+.++..+. ||||+++++.+.+...+|+||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD-GAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEEE
Confidence 5889999999999999999999999999999997654444555678889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
|||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCccccccccc
Confidence 999999999999888889999999999999999999999999999999999999 778899999999986442110
Q ss_pred ----------------------------------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCC
Q 008475 258 ----------------------------------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFW 302 (564)
Q Consensus 258 ----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~ 302 (564)
.....+||+.|+|||++.+ .++.++|||||||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 1123579999999999875 58999999999999999999999999
Q ss_pred CCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCCCcCCCC
Q 008475 303 AETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL---TAHEVLCHPWICENG 363 (564)
Q Consensus 303 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~---s~~~vl~hp~~~~~~ 363 (564)
+.+....+..+.........+....+++++++||.+|+ .||.+|+ ++.++++||||+...
T Consensus 238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~ 300 (360)
T cd05627 238 SETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGVD 300 (360)
T ss_pred CCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCCC
Confidence 99888888887764333333333347899999999987 5999998 489999999998743
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-47 Score=375.97 Aligned_cols=254 Identities=26% Similarity=0.409 Sum_probs=212.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.+. ||||+++++++.+....++|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLK-HANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEEEE
Confidence 359999999999999999999999999999999865432 222346778999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|||+. ++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 82 FEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred EeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEECcCcceeeccCCC
Confidence 99996 48988886644 57999999999999999999999999999999999999 77789999999998764322
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC--------------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF-------------- 320 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~-------------- 320 (564)
.......+++.|+|||++.+ .++.++||||+||++|+|++|++||.+.+..+.+..+.+.....
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 22344678999999999864 48999999999999999999999999888766665553311100
Q ss_pred -----CC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 321 -----ES-------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 321 -----~~-------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+. ...+.+++++++||.+||.+||.+|||++|+|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 00 0123468899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=380.64 Aligned_cols=256 Identities=27% Similarity=0.442 Sum_probs=226.5
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++.+.||+|+||.||+|.+..+++.||+|++.+.........+....|..++..+..|++|+++++++.+...+|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 78899999999999999999999999999999865443444556677888898888779999999999999999999999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CCce
Q 008475 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIF 259 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~~~ 259 (564)
|+++|+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ....
T Consensus 82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~~~ 158 (323)
T cd05616 82 YVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGVTT 158 (323)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCCcc
Confidence 99999999999888889999999999999999999999999999999999999 7788999999999875432 2334
Q ss_pred ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 338 (564)
...+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+...+...+......++ ..+++++.+||.+
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~ 234 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAICKG 234 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CcCCHHHHHHHHH
Confidence 45679999999999984 599999999999999999999999999998888888887765544 3478999999999
Q ss_pred hcccCCCCCCCH-----HHHhcCCCcCCCC
Q 008475 339 MLCSQPSERLTA-----HEVLCHPWICENG 363 (564)
Q Consensus 339 ~l~~dp~~R~s~-----~~vl~hp~~~~~~ 363 (564)
||+.||.+|+++ .++++||||....
T Consensus 235 ~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 235 LMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred HcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 999999999984 8999999998643
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-47 Score=383.73 Aligned_cols=250 Identities=32% Similarity=0.546 Sum_probs=221.2
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|.+..++..||+|++.+...........+..|+++++.+. ||||+++++++.....+||||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999998655444555667788999999997 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCCceecc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDV 262 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~~~~~~ 262 (564)
|+|..++...+.+++..+..++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||++.... ........
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTF 156 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeecCCCCcccccc
Confidence 9999999888889999999999999999999997 899999999999999 778899999999987533 22333456
Q ss_pred cCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 008475 263 VGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341 (564)
Q Consensus 263 ~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~ 341 (564)
.||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+...++ ..+++++.+||.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~L~ 232 (325)
T cd05594 157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLSGLLK 232 (325)
T ss_pred cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhh
Confidence 79999999999974 589999999999999999999999999888888887776655544 3478999999999999
Q ss_pred cCCCCCC-----CHHHHhcCCCcCCC
Q 008475 342 SQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 342 ~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
.||++|+ ++.++++||||...
T Consensus 233 ~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 9999997 99999999999863
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-47 Score=387.67 Aligned_cols=259 Identities=30% Similarity=0.491 Sum_probs=225.6
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|.+.+.||+|+||.||+|.+..+++.||+|++.+.........+.+..|+.+++.+. ||||+++++++.+...+||||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN-SPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCeEEEEE
Confidence 5889999999999999999999999999999998655444556677889999999886 999999999999999999999
Q ss_pred eccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 180 ELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCCCc
Confidence 999999999999775 679999999999999999999999999999999999999 7788999999999987654332
Q ss_pred --eecccCCCcccchhhhh-------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 259 --FTDVVGSPYYVAPEVLL-------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 259 --~~~~~gt~~y~aPE~~~-------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
.....||+.|+|||++. ..++.++|||||||++|+|++|..||........+..+.........+..+.++
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVS 237 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCC
Confidence 23357899999999986 247889999999999999999999999888887777776654333333334689
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+++.+||.+||. +|.+||++.++++||||....
T Consensus 238 ~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~ 270 (330)
T cd05601 238 SDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKID 270 (330)
T ss_pred HHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCC
Confidence 999999999998 999999999999999998743
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=379.13 Aligned_cols=251 Identities=27% Similarity=0.468 Sum_probs=218.6
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|++..+|..||+|++.+..............|..++..+.+||||+++++++.+...+|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999997654323334566778888888765699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~~~~~~~ 263 (564)
|+|..++...+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.... ........+
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEeCccCCCeecccCCCceeccC
Confidence 9999999888889999999999999999999999999999999999999 777899999999987532 223345577
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..++.+.+..+...++ ..++.++.+||.+||..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP----RWITKESKDILEKLFER 233 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999985 589999999999999999999999999888888888776554333 34789999999999999
Q ss_pred CCCCCCCH-HHHhcCCCcCCC
Q 008475 343 QPSERLTA-HEVLCHPWICEN 362 (564)
Q Consensus 343 dp~~R~s~-~~vl~hp~~~~~ 362 (564)
||++||++ +++++||||+..
T Consensus 234 dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 234 DPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred CHHHcCCChHHHHcCCCcCCC
Confidence 99999998 589999999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=379.02 Aligned_cols=251 Identities=29% Similarity=0.530 Sum_probs=222.0
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|.+..++..||+|++.+...........+..|+.+++.+.+||||+++++++.+...+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999998654444455667788999999886799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~~~~~~~ 263 (564)
++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCCccccee
Confidence 9999999888889999999999999999999999999999999999999 778899999999987532 222334467
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
|++.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......++ ..+++++.+||.+||..
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP----RWLSKEAKSILKSFLTK 233 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHccC
Confidence 8999999999985 589999999999999999999999998888888888877655443 34789999999999999
Q ss_pred CCCCCCCH-----HHHhcCCCcCCC
Q 008475 343 QPSERLTA-----HEVLCHPWICEN 362 (564)
Q Consensus 343 dp~~R~s~-----~~vl~hp~~~~~ 362 (564)
||.+||++ .++++||||+..
T Consensus 234 dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 234 NPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999999 999999999874
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-46 Score=377.57 Aligned_cols=251 Identities=30% Similarity=0.489 Sum_probs=218.0
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|++..+++.||+|++.+.........+....|..++..+.+||||+++++++.....+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999997654333444556677888887665699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~~~~~~~ 263 (564)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......+
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 7778999999999876432 23334567
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+++..+......++ ..++.++.+||.+||..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~ll~~~l~~ 233 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP----RWISKEAKDCLSKLFER 233 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999985 589999999999999999999999999888888888766543332 35789999999999999
Q ss_pred CCCCCCCH-HHHhcCCCcCCC
Q 008475 343 QPSERLTA-HEVLCHPWICEN 362 (564)
Q Consensus 343 dp~~R~s~-~~vl~hp~~~~~ 362 (564)
||.+||++ .++++||||...
T Consensus 234 ~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 234 DPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CHHHcCCChHHHHcCcccCCC
Confidence 99999986 588999999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-48 Score=356.95 Aligned_cols=260 Identities=32% Similarity=0.538 Sum_probs=241.7
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
.-+.|..+++||+|.||+|.+|+.+.+++.||+|++++.-+.....+..-..|-++|+..+ ||.+..+--.|+..+++|
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEE
Confidence 3356889999999999999999999999999999999988888888888899999999997 999999998999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc-CC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~-~~ 255 (564)
+||||..||.|+-+|...+.+++..++.+-..|+.||.|||+.+||+||||.+|+|+ |.+|++||.|||+++.. ..
T Consensus 245 FVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchhcccc
Confidence 999999999999999988899999999999999999999999999999999999999 99999999999998753 34
Q ss_pred CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
+....++||||.|+|||++.. .|+.++|+|.+||++|||++|++||+..+...+++.|.-+.+.|+. .++++++.
T Consensus 322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr----~ls~eAkt 397 (516)
T KOG0690|consen 322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR----TLSPEAKT 397 (516)
T ss_pred cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc----cCCHHHHH
Confidence 556778999999999999984 6999999999999999999999999999999999999999888875 48999999
Q ss_pred HHHHhcccCCCCCC-----CHHHHhcCCCcCCCCC
Q 008475 335 LIRKMLCSQPSERL-----TAHEVLCHPWICENGV 364 (564)
Q Consensus 335 li~~~l~~dp~~R~-----s~~~vl~hp~~~~~~~ 364 (564)
|+..+|.+||.+|. .+.+|.+|+||....+
T Consensus 398 LLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W 432 (516)
T KOG0690|consen 398 LLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW 432 (516)
T ss_pred HHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence 99999999999998 5889999999997653
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-46 Score=373.14 Aligned_cols=255 Identities=26% Similarity=0.412 Sum_probs=212.4
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|+||.||+|++..+++.||+|++..... .....+.+.+|+.+++.+. ||||+++++++..+..+|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLK-QENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCC-CccccchhhhEecCCEEEEEE
Confidence 58999999999999999999999999999999975432 3344567889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
||++++.+..+......+++..++.++.||+.||.|||+.||+||||||+||++ +.++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccCcccccccccc
Confidence 999887776554445679999999999999999999999999999999999999 777899999999998754322
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc------------------
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI------------------ 318 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~------------------ 318 (564)
......|++.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+....+.....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07848 157 NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG 236 (287)
T ss_pred cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcc
Confidence 2334678999999999874 589999999999999999999999988765544333322100
Q ss_pred -cCCC---------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 319 -DFES---------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 319 -~~~~---------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.++. .....+|.++.+||.+||++||++|||++++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 237 LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0000 0112368899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=378.08 Aligned_cols=251 Identities=26% Similarity=0.466 Sum_probs=215.5
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++.++.+||||+++++++.+...+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999998765545556677889999998886799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~~~~~~~ 263 (564)
++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 778899999999987532 223344567
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC---------CHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE---------TQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
||+.|+|||++.+ .++.++|||||||++|+|++|..||... ....+.+.+......++ ..++..+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~ 233 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAA 233 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC----CCCCHHHH
Confidence 9999999999985 5899999999999999999999999521 12234445555544433 35789999
Q ss_pred HHHHHhcccCCCCCCC------HHHHhcCCCcCCC
Q 008475 334 DLIRKMLCSQPSERLT------AHEVLCHPWICEN 362 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s------~~~vl~hp~~~~~ 362 (564)
+||.+||..||++||+ +.++++||||...
T Consensus 234 ~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 234 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred HHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 9999999999999998 5899999999764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-46 Score=377.38 Aligned_cols=253 Identities=30% Similarity=0.501 Sum_probs=219.9
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHH---hhcCCCCccEEEEEEecCCeEEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH---HLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~---~l~~h~niv~~~~~~~~~~~~~l 177 (564)
|++.+.||+|+||.||+|.+..+++.||||++.+.........+.+.+|+.++. .+. ||||+++++++.....+|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~-hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER-HPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccC-CCChhceeeEEEcCCEEEE
Confidence 678899999999999999999999999999997654434445667777877664 454 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-C
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-G 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~ 256 (564)
||||+++++|...+.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .
T Consensus 80 v~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 80 VMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCCC
Confidence 9999999999887754 579999999999999999999999999999999999999 7788999999999875332 2
Q ss_pred CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
......+|++.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+..+...++ ..+++.+.+|
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l 231 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFLSREAISI 231 (324)
T ss_pred CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence 23345779999999999875 589999999999999999999999999988888888877765543 3578999999
Q ss_pred HHHhcccCCCCCC-----CHHHHhcCCCcCCC
Q 008475 336 IRKMLCSQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 336 i~~~l~~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
|.+||..||.+|| ++.++++||||+..
T Consensus 232 i~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 232 MRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred HHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 9999999999999 79999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-46 Score=383.14 Aligned_cols=260 Identities=31% Similarity=0.471 Sum_probs=223.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.+. ||||+++++.+.++..+|+|
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEEEE
Confidence 56999999999999999999999999999999997644434444566788999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 122 ~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll---~~~~~ikL~DfG~a~~~~~~~~ 197 (371)
T cd05622 122 MEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGM 197 (371)
T ss_pred EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE---CCCCCEEEEeCCceeEcCcCCc
Confidence 999999999988765 468999999999999999999999999999999999999 778899999999998664332
Q ss_pred -ceecccCCCcccchhhhhh-----cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 258 -IFTDVVGSPYYVAPEVLLK-----HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~~-----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.....+||+.|+|||++.+ .++.++|||||||++|||++|..||.+.+....+..+.........+....++.+
T Consensus 198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 277 (371)
T cd05622 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE 277 (371)
T ss_pred ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHH
Confidence 2235679999999999873 2788999999999999999999999999888888888765544444444578999
Q ss_pred HHHHHHHhcccCCCC--CCCHHHHhcCCCcCCCC
Q 008475 332 AKDLIRKMLCSQPSE--RLTAHEVLCHPWICENG 363 (564)
Q Consensus 332 ~~~li~~~l~~dp~~--R~s~~~vl~hp~~~~~~ 363 (564)
+++||.+||..+|.+ |+++.++++||||++..
T Consensus 278 ~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~ 311 (371)
T cd05622 278 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ 311 (371)
T ss_pred HHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence 999999999844443 78999999999998743
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-46 Score=373.21 Aligned_cols=257 Identities=26% Similarity=0.381 Sum_probs=208.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|++..+++.||+|++..... ......+.+|+.+++.+. ||||+++++++.+....|+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCC-CCCcCeEEEEEecCCeEEEE
Confidence 569999999999999999999999999999999865432 222345678999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-C
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-G 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~ 256 (564)
|||+. ++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccCCC
Confidence 99995 6787777654 568999999999999999999999999999999999999 7778999999999875432 2
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCcc--------------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHID-------------- 319 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~-------------- 319 (564)
.......+++.|+|||++.+ .++.++||||+||++|+|++|..||.+... .+.+..+......
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH 237 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc
Confidence 23345678999999999864 488899999999999999999999987543 2333322210000
Q ss_pred CCCCC--------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 320 FESDP--------------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 320 ~~~~~--------------~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+.... ...+++.+.+||.+||+.||.+|||+.++|+||||+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 00000 01245789999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=390.49 Aligned_cols=261 Identities=26% Similarity=0.355 Sum_probs=207.2
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc-----CCCCccEEEEEEe
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA-----GHKNIVTIKGAYE 170 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~~~~ 170 (564)
...++|++.++||+|+||+||+|.+..+++.||||++... .........|+.+++.++ +|+++++++++|.
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3457799999999999999999999999999999999642 122344567888887775 2445889999887
Q ss_pred cC-CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCC-----------
Q 008475 171 DS-LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKD----------- 237 (564)
Q Consensus 171 ~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~----------- 237 (564)
.. .++|||||++ |++|.+++.+.+.+++..+..|+.||+.||.|||+ .|||||||||+|||+...+
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence 64 5799999998 78999999888889999999999999999999998 5999999999999994322
Q ss_pred --CCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 008475 238 --DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL 314 (564)
Q Consensus 238 --~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~ 314 (564)
+...+||+|||.+.... ......+||+.|+|||++.+ .|+.++|||||||++|||++|++||.+.+..+.+..+.
T Consensus 281 ~~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~ 358 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLME 358 (467)
T ss_pred CCCCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 11259999999876432 23345789999999999985 59999999999999999999999998877665554443
Q ss_pred cCCccCCC-------------------------C-----------CC--CCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 315 KGHIDFES-------------------------D-----------PW--PLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 315 ~~~~~~~~-------------------------~-----------~~--~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+....++. . .. ...++.+.+||.+||++||.+|||++|+|+|
T Consensus 359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 21110000 0 00 0114567899999999999999999999999
Q ss_pred CCcCCCC
Q 008475 357 PWICENG 363 (564)
Q Consensus 357 p~~~~~~ 363 (564)
|||....
T Consensus 439 p~~~~~~ 445 (467)
T PTZ00284 439 PYVLKYY 445 (467)
T ss_pred ccccccC
Confidence 9998753
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-46 Score=374.43 Aligned_cols=252 Identities=28% Similarity=0.469 Sum_probs=217.8
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|.+..+++.||+|++................|..++..+.+||||+++++++.+...+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654322334556677888888765699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~~~~~~~ 263 (564)
|+|..++.....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ........
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL---DTDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEccCCcceECCCCCCceeeec
Confidence 9999999887889999999999999999999999999999999999999 7778999999999875322 22334567
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.+..++...+......++ ..++.++.+||.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP----RWLTREAKDILVKLFVR 233 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHhcc
Confidence 9999999999975 589999999999999999999999999888888877765543332 34789999999999999
Q ss_pred CCCCCCCHH-HHhcCCCcCCCC
Q 008475 343 QPSERLTAH-EVLCHPWICENG 363 (564)
Q Consensus 343 dp~~R~s~~-~vl~hp~~~~~~ 363 (564)
||.+||++. ++++||||....
T Consensus 234 ~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 234 EPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred CHhhcCCChHHHHcCcccCCCC
Confidence 999999996 899999998743
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-46 Score=375.24 Aligned_cols=255 Identities=27% Similarity=0.456 Sum_probs=224.5
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|+..+.||+|+||.||+|++..+++.||+|++.+.........+.+..|+.+++.+..|++|+++++++.+...+|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 67789999999999999999999999999999765443444556778899999988767889999999999999999999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-Cce
Q 008475 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-QIF 259 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~~~ 259 (564)
|++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...... ...
T Consensus 82 y~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---~~~~~ikL~Dfg~~~~~~~~~~~~ 158 (323)
T cd05615 82 YVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDGVTT 158 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeccccccccCCCCccc
Confidence 99999999999888889999999999999999999999999999999999999 77889999999998754322 223
Q ss_pred ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 338 (564)
....||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.....+...+......++ ..++.++.+++.+
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~ 234 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICKG 234 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHH
Confidence 45678999999999974 589999999999999999999999999988888888887665543 3478999999999
Q ss_pred hcccCCCCCCC-----HHHHhcCCCcCCC
Q 008475 339 MLCSQPSERLT-----AHEVLCHPWICEN 362 (564)
Q Consensus 339 ~l~~dp~~R~s-----~~~vl~hp~~~~~ 362 (564)
||..+|.+|++ .+++++||||...
T Consensus 235 ~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 235 LMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred HcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 99999999997 5799999999864
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-46 Score=379.69 Aligned_cols=255 Identities=31% Similarity=0.527 Sum_probs=216.0
Q ss_pred eeecccccccCCeEEEEEEEc---cCCcEEEEEEeccccCC-CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLI-SREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
|++.+.||+|+||.||+|++. .++..||+|++.+.... .....+.+..|+.+++.+++||||+++++++.....++
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 889999999999999999864 47889999999754322 23345668899999999977999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+||||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 82 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili---~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE---CCCCCEEEeeCcCCcccccc
Confidence 999999999999999888889999999999999999999999999999999999999 77789999999998764332
Q ss_pred --CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHcCCccCCCCCCCCC
Q 008475 257 --QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAET----QQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 257 --~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ...+...+...... ....+
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 234 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPP----FPSFI 234 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCC----CCCCC
Confidence 22335679999999999975 37889999999999999999999996432 33344444443332 22458
Q ss_pred CHHHHHHHHHhcccCCCCCC-----CHHHHhcCCCcCCC
Q 008475 329 SDSAKDLIRKMLCSQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
++.+.+||.+||..||++|| +++++++||||+..
T Consensus 235 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 235 GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 89999999999999999999 88999999999863
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-46 Score=375.51 Aligned_cols=250 Identities=33% Similarity=0.587 Sum_probs=218.7
Q ss_pred ccccccCCeEEEEEEEc---cCCcEEEEEEeccccCC-CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 105 RKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLI-SREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
+.||+|+||.||+|++. .+++.||+|++.+.... .......+..|+.+++.+. ||||+++++++..+..+|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC-CCchhceeeEEecCCeEEEEEe
Confidence 57999999999999864 47889999999754321 2233456788999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CCce
Q 008475 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIF 259 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~~~ 259 (564)
|+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTVT 157 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCCcc
Confidence 99999999999888889999999999999999999999999999999999999 7788999999999875332 2233
Q ss_pred ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 338 (564)
....||+.|+|||++.+ .++.++|||||||++|||++|+.||...+.......+..+...++ +.+++.+.+||.+
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~ 233 (323)
T cd05584 158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLLKK 233 (323)
T ss_pred cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHH
Confidence 45679999999999875 588999999999999999999999999888888888887765443 3578999999999
Q ss_pred hcccCCCCCC-----CHHHHhcCCCcCCC
Q 008475 339 MLCSQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 339 ~l~~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
||..||++|| ++.++++||||...
T Consensus 234 ~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 234 LLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred HcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999999 89999999999864
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-46 Score=368.56 Aligned_cols=259 Identities=30% Similarity=0.469 Sum_probs=218.4
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++.++||+|+||.||++.+..+++.||+|++.............+.+|+.+++.+. ||||+++++.+..+..+|+|||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC-CCCEeeeeeeecCCCeEEEEEe
Confidence 788999999999999999999999999999997654333334456778999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 181 LCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 181 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|+++|+|..++... ..+++..+..++.|++.||.|||++||+||||||+||++ ++++.++|+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCCCc
Confidence 99999999887653 458999999999999999999999999999999999999 7778999999999987654444
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
....+|++.|+|||++.+ .++.++||||+||++|+|++|..||.+.......+.+..............+++.+.+||.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICR 237 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHH
Confidence 455678999999999874 5899999999999999999999999876654433333222111122223458899999999
Q ss_pred HhcccCCCCCC-----CHHHHhcCCCcCCCC
Q 008475 338 KMLCSQPSERL-----TAHEVLCHPWICENG 363 (564)
Q Consensus 338 ~~l~~dp~~R~-----s~~~vl~hp~~~~~~ 363 (564)
+||..||.+|| +++++++||||....
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05605 238 QLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268 (285)
T ss_pred HHccCCHHHhcCCCCCCHHHHhcCcCccCCC
Confidence 99999999999 899999999998743
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-46 Score=376.28 Aligned_cols=250 Identities=29% Similarity=0.522 Sum_probs=216.4
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHH-HHhhcCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI-MHHLAGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
+.||+|+||+||+|.+..+|+.||+|++.+...........+..|..+ ++.++ ||||+++++.+.....+|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCC-CCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 469999999999999999999999999976544333344555566554 56676 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCCceecc
Q 008475 184 GGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDV 262 (564)
Q Consensus 184 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~~~~~~ 262 (564)
+|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ........
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSKTTSTF 156 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCcccccCCCccccc
Confidence 99999999888889999999999999999999999999999999999999 778899999999987532 22333456
Q ss_pred cCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 008475 263 VGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341 (564)
Q Consensus 263 ~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~ 341 (564)
+||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..++.+.+..+..... +.+++.+.+||.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~ 232 (323)
T cd05575 157 CGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNISVSARHLLEGLLQ 232 (323)
T ss_pred cCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhh
Confidence 79999999999875 589999999999999999999999999888888888877654433 4579999999999999
Q ss_pred cCCCCCCCH----HHHhcCCCcCCC
Q 008475 342 SQPSERLTA----HEVLCHPWICEN 362 (564)
Q Consensus 342 ~dp~~R~s~----~~vl~hp~~~~~ 362 (564)
.||.+||++ .++++||||...
T Consensus 233 ~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 233 KDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred cCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 999999987 699999999763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-46 Score=377.69 Aligned_cols=259 Identities=27% Similarity=0.413 Sum_probs=212.3
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC-----Ce
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS-----LC 174 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-----~~ 174 (564)
+|++.+.||+|+||.||+|.+..++..||||++.... ........+.+|+.+++.++ ||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCC-CCCEeeecceEeccCCCCCce
Confidence 4889999999999999999999999999999986432 22334457889999999997 99999999988543 35
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+|+||||| +++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 79 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 79 IYVVFELM-ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEEecC-CCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccc
Confidence 89999999 57899999888889999999999999999999999999999999999999 778899999999987543
Q ss_pred CC----CceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc------------
Q 008475 255 PG----QIFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK------------ 315 (564)
Q Consensus 255 ~~----~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~------------ 315 (564)
.. .......||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+....+..+..
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 21 12234679999999999863 589999999999999999999999987664333222111
Q ss_pred ---------------CCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 316 ---------------GHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 316 ---------------~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
.........++.+++.+.++|.+||..||++|||+.++|+||||+....
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 0000011123457889999999999999999999999999999987544
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=374.24 Aligned_cols=251 Identities=25% Similarity=0.458 Sum_probs=215.8
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|++..+++.||+|++.+.........+.+.+|+.++.++.+||||+.+++++.+...+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999998765444556677889999999997799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc-CCCCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~-~~~~~~~~~~ 263 (564)
++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++... .........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---eCCCCEEEeccccceeccCCCCceeccc
Confidence 9999999888889999999999999999999999999999999999999 77789999999998753 2333445678
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC-------CHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE-------TQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~-------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
||+.|+|||++.+ .++.++|||||||++|+|++|..||... ........+......++ ..++..+.++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~l 233 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP----RFLSVKASHV 233 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence 9999999999975 5899999999999999999999999532 12234444444433332 3578999999
Q ss_pred HHHhcccCCCCCCC------HHHHhcCCCcCCC
Q 008475 336 IRKMLCSQPSERLT------AHEVLCHPWICEN 362 (564)
Q Consensus 336 i~~~l~~dp~~R~s------~~~vl~hp~~~~~ 362 (564)
|.+||..||.+|++ +.++++||||...
T Consensus 234 i~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 234 LKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred HHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 99999999999998 5799999999864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-45 Score=372.10 Aligned_cols=259 Identities=23% Similarity=0.330 Sum_probs=218.5
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||.||+|++..++..||+|++.... .....+.+.+|+++++.+. ||||+++++++..+..+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 80 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISI 80 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEE
Confidence 366999999999999999999999999999999987542 3445677999999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL-GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||+++++|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE---cCCCcEEEccCccccccccc
Confidence 999999999999998888899999999999999999999986 69999999999999 67789999999998765432
Q ss_pred CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc-----------------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI----------------- 318 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~----------------- 318 (564)
......|++.|+|||++.+ .++.++|||||||++|+|++|+.||......++...+.....
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence 2345678999999999985 589999999999999999999999977665444322211000
Q ss_pred ---------------------------cCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 319 ---------------------------DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 319 ---------------------------~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
..+..+...+++++++||.+||.+||++|||+.++++||||+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 000111224688999999999999999999999999999998644
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-46 Score=378.59 Aligned_cols=250 Identities=30% Similarity=0.527 Sum_probs=218.0
Q ss_pred ccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc--CCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA--GHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 107 lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
||+|+||+||+|++..+++.||+|++.+..............|..++..+. +||||+.+++++.....+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999997654433444455666777777664 699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CCceeccc
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~~~~~~~ 263 (564)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......+
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 9999999888899999999999999999999999999999999999999 7778999999999875432 23344577
Q ss_pred CCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 008475 264 GSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341 (564)
Q Consensus 264 gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~ 341 (564)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+..+...++. ..+++++.+||.+||.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~~L~ 234 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK---NVLSDEGRQFVKGLLN 234 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC---ccCCHHHHHHHHHHcC
Confidence 9999999999874 4889999999999999999999999999888888888877665543 2478999999999999
Q ss_pred cCCCCCC----CHHHHhcCCCcCCC
Q 008475 342 SQPSERL----TAHEVLCHPWICEN 362 (564)
Q Consensus 342 ~dp~~R~----s~~~vl~hp~~~~~ 362 (564)
.||.+|| ++.++++||||...
T Consensus 235 ~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 235 RNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCHHHCCCCCCCHHHHhcCccccCC
Confidence 9999998 79999999999863
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=372.86 Aligned_cols=260 Identities=28% Similarity=0.516 Sum_probs=220.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.++..+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD-RRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCceEEEEecCCeEEEE
Confidence 35899999999999999999999999999999997644434445667889999999986 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCCC
Confidence 999999999999976 4579999999999999999999999999999999999999 778899999999987654332
Q ss_pred c--eecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC-CCCCCC
Q 008475 258 I--FTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES-DPWPLI 328 (564)
Q Consensus 258 ~--~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 328 (564)
. .....||+.|+|||++. +.++.++||||+||++|+|++|+.||.+....+.+..+......+.. .....+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 236 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDV 236 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCC
Confidence 2 22356899999999986 24788999999999999999999999988877777777654322221 122458
Q ss_pred CHHHHHHHHHhcccCCCC--CCCHHHHhcCCCcCCC
Q 008475 329 SDSAKDLIRKMLCSQPSE--RLTAHEVLCHPWICEN 362 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~--R~s~~~vl~hp~~~~~ 362 (564)
++.+++||++||..++.+ |+++.++++||||...
T Consensus 237 ~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 237 SEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred CHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 999999999999765444 7899999999999764
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=366.09 Aligned_cols=255 Identities=25% Similarity=0.379 Sum_probs=209.0
Q ss_pred ceeecccccccCCeEEEEEEEcc-CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc--CCCCccEEEEEEe-----c
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIA-TGIEFACKSISKRKLISREDVEDVRREIQIMHHLA--GHKNIVTIKGAYE-----D 171 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~-----~ 171 (564)
+|++.+.||+|+||.||+|++.. ++..||+|++..... .........+|+.+++.+. .||||+++++++. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccC-CCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 58999999999999999999854 468899999865432 2222345567888877764 4999999999885 3
Q ss_pred CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
...+++||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~---~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---cCCCCEEEccccc
Confidence 456899999995 6898888653 458999999999999999999999999999999999999 6778999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES------ 322 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~------ 322 (564)
+.............||+.|+|||++.+ .++.++|||||||++|||++|.+||.+....+.+..+.........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 157 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 236 (290)
T ss_pred eEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence 987655444456678999999999874 5899999999999999999999999988877776666542211100
Q ss_pred -----------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 323 -----------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 323 -----------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
...+.+++.+.+||.+||+.||++|||+.++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 0113467889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-45 Score=373.44 Aligned_cols=255 Identities=24% Similarity=0.365 Sum_probs=209.6
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.++||+|+||.||+|++..+++.||||++.... .......+.+|+++++.+. |+||+++++++.....+++|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVN-HPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCC-CCCcceeeeEeccCCeEEEE
Confidence 44888999999999999999999999999999986432 3445567889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
|||+++++|... ....+..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 151 ~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 151 LEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred EecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEcccccceecccccc
Confidence 999999998643 346788889999999999999999999999999999999 777899999999998654322
Q ss_pred ceecccCCCcccchhhhhh------cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK------HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
......||..|+|||++.. ..+.++|||||||++|||++|+.||......+....+..............++.+
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASRE 303 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHH
Confidence 2345679999999998842 2456899999999999999999999754332222222111111122233467899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+.+||.+||..||++|||+.|+|+||||....
T Consensus 304 l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 304 FRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 99999999999999999999999999999864
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=373.56 Aligned_cols=256 Identities=30% Similarity=0.507 Sum_probs=232.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe-EEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC-VHI 177 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~-~~l 177 (564)
+.|..++++|+|+||.+++++++.++..|++|.|.-..... ...+...+|+.+++++. |||||.+.+.|..+++ +||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~-~~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE-PERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc-hhhHHHHHHHHHHHhcc-CCCeeeeccchhcCCceEEE
Confidence 45899999999999999999999999999999998766533 34457889999999998 9999999999999888 999
Q ss_pred EEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||+||+||+|.+.+.+.+ .++++.+..|+.|++.|+.|||+++|+|||||+.||++ ..+..|||+|||+|+...+
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl---tk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL---TKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc---cccCceeecchhhhhhcCC
Confidence 999999999999997654 58999999999999999999999999999999999999 5666789999999999887
Q ss_pred CC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 GQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.. ...+.+||+.|++||++.+ .|+.|+|||||||++|||++-+++|.+.+...+..+|.++..... ...++.+++
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl---p~~ys~el~ 235 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL---PSMYSSELR 235 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC---CccccHHHH
Confidence 76 6778999999999999986 699999999999999999999999999999999999998874433 246899999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.||..||..+|..||++.++|.+|.+...
T Consensus 236 ~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 236 SLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 99999999999999999999999988753
|
|
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=364.10 Aligned_cols=248 Identities=30% Similarity=0.491 Sum_probs=209.2
Q ss_pred ccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCCc
Q 008475 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGE 186 (564)
Q Consensus 107 lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 186 (564)
||+|+||+||+|.+..+++.||+|.+.+.........+.+..|+.+++.+. ||||+++.+++.....+|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH-SRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC-CCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 799999999999999999999999997654434444567788999999996 9999999999999999999999999999
Q ss_pred hHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-ceec
Q 008475 187 LFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-IFTD 261 (564)
Q Consensus 187 L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-~~~~ 261 (564)
|...+.. ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....... ....
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCccceecCCCCccccc
Confidence 9877743 3468999999999999999999999999999999999999 777899999999987654332 2334
Q ss_pred ccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 262 VVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ----GIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 262 ~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
..||+.|+|||++.+ .++.++|||||||++|+|++|+.||...... .....+..... .....+++.+.+|+
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li 232 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV----TYPDKFSPASKSFC 232 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC----CCcccCCHHHHHHH
Confidence 678999999999984 5899999999999999999999999765432 22333332222 22245889999999
Q ss_pred HHhcccCCCCCC-----CHHHHhcCCCcCCC
Q 008475 337 RKMLCSQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 337 ~~~l~~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
.+||+.||++|| +++++++||||+..
T Consensus 233 ~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 233 EALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred HHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 999999999999 88999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=373.13 Aligned_cols=250 Identities=28% Similarity=0.500 Sum_probs=216.2
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHH-HHhhcCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI-MHHLAGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
+.||+|+||.||+|++..+|+.||+|++.+...........+..|..+ ++.+. ||||+++++++.....+|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCC-CCCCccEEEEEecCCEEEEEEcCCC
Confidence 469999999999999999999999999976544334445556666654 55565 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CCceecc
Q 008475 184 GGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTDV 262 (564)
Q Consensus 184 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~~~~~~ 262 (564)
+|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~ 156 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSDTTTTF 156 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccCCCCCCCcccc
Confidence 99999999888899999999999999999999999999999999999999 7788999999999875322 2333456
Q ss_pred cCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 008475 263 VGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341 (564)
Q Consensus 263 ~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~ 341 (564)
+||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..+++..+..+..... +.++..+.++|.+||.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~ll~ 232 (325)
T cd05604 157 CGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLE 232 (325)
T ss_pred cCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC----CCCCHHHHHHHHHHhc
Confidence 79999999999985 589999999999999999999999999888888888877654433 3578999999999999
Q ss_pred cCCCCCCCH----HHHhcCCCcCCC
Q 008475 342 SQPSERLTA----HEVLCHPWICEN 362 (564)
Q Consensus 342 ~dp~~R~s~----~~vl~hp~~~~~ 362 (564)
.||.+||++ .+++.||||...
T Consensus 233 ~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 233 KDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred cCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 999999977 589999999763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-47 Score=371.42 Aligned_cols=261 Identities=33% Similarity=0.579 Sum_probs=236.3
Q ss_pred cccceee--cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 97 IRDLYTL--GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 97 ~~~~y~~--~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
|...|+| .+.||.|.||+||-|+++.+|+.||||+|.+..+... ...++++|+.||+++. ||.||.+.-.|++.+.
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l~-HPGiV~le~M~ET~er 637 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNLH-HPGIVNLECMFETPER 637 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhcC-CCCeeEEEEeecCCce
Confidence 3344665 5789999999999999999999999999998777443 4478999999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 175 VHIVMELCAGGELFDRII--QRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
+++|||-+ .|+.++.|. ..+++++.....++.||+.||.|||-++|+|+||||+|||+.+.+.--.+||||||+|++
T Consensus 638 vFVVMEKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 638 VFVVMEKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred EEEEehhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceee
Confidence 99999999 556666664 357899999999999999999999999999999999999998777777899999999999
Q ss_pred cCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 253 FKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 253 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
+.......+.+|||.|+|||+++. .|...-|+||.|||+|--|+|..||..+ +++-++|.+..+.++..+|..++++
T Consensus 717 IgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW~eis~~ 794 (888)
T KOG4236|consen 717 IGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPWSEISPE 794 (888)
T ss_pred cchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCchhhcCHH
Confidence 988888888999999999999985 5999999999999999999999999654 3567888899999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
++|||+.+|+..-.+|.|+++.|.|||++++
T Consensus 795 AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 795 AIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred HHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 9999999999999999999999999999874
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=386.62 Aligned_cols=253 Identities=27% Similarity=0.418 Sum_probs=207.4
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC-----
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS----- 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~----- 172 (564)
...|++++.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++ ||||++++++|...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~-h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLN-HINIIFLKDYYYTECFKKN 136 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcC-CCCCcceeeeEeecccccC
Confidence 356999999999999999999999999999999885432 22347999999997 99999999887432
Q ss_pred ---CeEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC-CCcEEE
Q 008475 173 ---LCVHIVMELCAGGELFDRII----QRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD-DFSLKA 244 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~-~~~~kl 244 (564)
..+++||||+++ +|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||+ +. .+.+||
T Consensus 137 ~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl---~~~~~~vkL 212 (440)
T PTZ00036 137 EKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI---DPNTHTLKL 212 (440)
T ss_pred CCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEE---cCCCCceee
Confidence 257899999964 6766664 34579999999999999999999999999999999999999 43 347999
Q ss_pred eeCCCccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----
Q 008475 245 IDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH----- 317 (564)
Q Consensus 245 ~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~----- 317 (564)
+|||++............+||+.|+|||++.+ .|+.++|||||||++|||++|.+||.+.+..+.+..+.+..
T Consensus 213 ~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 213 CDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred eccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 99999987665555556788999999999874 58999999999999999999999999887666555543311
Q ss_pred ------------ccCCCC--------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 318 ------------IDFESD--------PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 318 ------------~~~~~~--------~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
..++.. .....++++++||.+||.+||.+|||+.|+|+||||...
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 011100 012367899999999999999999999999999999864
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=372.64 Aligned_cols=249 Identities=29% Similarity=0.509 Sum_probs=218.1
Q ss_pred ccccccCCeEEEEEEEc---cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEec
Q 008475 105 RKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMEL 181 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 181 (564)
+.||+|+||.||++++. .+|+.||+|++.+... .......+..|+++++++. ||||+++++++.+...+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVN-HPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCEEEEEEcC
Confidence 57999999999999863 5789999999976433 2233456778999999997 99999999999999999999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-Ccee
Q 008475 182 CAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-QIFT 260 (564)
Q Consensus 182 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~~~~ 260 (564)
+++++|.+++.+...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...... ....
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE---CCCCcEEEeeccCCcccCCCCCcee
Confidence 9999999999888889999999999999999999999999999999999999 77789999999998765433 2344
Q ss_pred cccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHh
Q 008475 261 DVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339 (564)
Q Consensus 261 ~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 339 (564)
...|++.|+|||++.+ .++.++|||||||++|+|++|+.||......+....+.+....++ ..+++.+.+||.+|
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~ 232 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSLLRAL 232 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHH
Confidence 5679999999999975 588999999999999999999999999888888888877655443 34789999999999
Q ss_pred cccCCCCCCC-----HHHHhcCCCcCCC
Q 008475 340 LCSQPSERLT-----AHEVLCHPWICEN 362 (564)
Q Consensus 340 l~~dp~~R~s-----~~~vl~hp~~~~~ 362 (564)
|+.||++||+ +.+++.||||...
T Consensus 233 l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 233 FKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred hhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 9999999999 7889999999863
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-45 Score=370.43 Aligned_cols=259 Identities=27% Similarity=0.488 Sum_probs=220.6
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.++||+|+||.||++++..+++.||+|++.+...........+..|+.++..+. |+||+++++.+.+...+|+||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-NQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCEEEEEE
Confidence 5899999999999999999999999999999997543333444556788999999986 999999999999999999999
Q ss_pred eccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 180 ELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
||+++|+|.+++.+ ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccCCc
Confidence 99999999999976 4678999999999999999999999999999999999999 778899999999987643322
Q ss_pred -ceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC-CCCCCC
Q 008475 258 -IFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD-PWPLIS 329 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s 329 (564)
.....+||+.|+|||++. +.++.++|||||||++|||++|+.||...+..+.+..+......+..+ ....++
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s 237 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVS 237 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCC
Confidence 223457999999999985 248899999999999999999999999988888888877654333221 234579
Q ss_pred HHHHHHHHHhcccCCCC--CCCHHHHhcCCCcCCC
Q 008475 330 DSAKDLIRKMLCSQPSE--RLTAHEVLCHPWICEN 362 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~--R~s~~~vl~hp~~~~~ 362 (564)
+++++||.+||+.+|.+ |+++.++++||||.+.
T Consensus 238 ~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 238 EDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred HHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 99999999999765554 6899999999999864
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-45 Score=370.38 Aligned_cols=250 Identities=28% Similarity=0.515 Sum_probs=214.0
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHH-HHHhhcCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQ-IMHHLAGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
+.||+|+||.||+|++..+++.||+|++.+...........+..|.. +++.+. ||||+++++++.....+|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCC-CCCCCceeEEEEcCCeEEEEEeCCC
Confidence 46999999999999999999999999997644322333344455554 456675 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCCceecc
Q 008475 184 GGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDV 262 (564)
Q Consensus 184 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~~~~~~ 262 (564)
+++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ........
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili---~~~~~~kl~DfG~a~~~~~~~~~~~~~ 156 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTF 156 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEEccCCCCcccccCCCCcccc
Confidence 99999999888889999999999999999999999999999999999999 677899999999987532 22334456
Q ss_pred cCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 008475 263 VGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341 (564)
Q Consensus 263 ~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~ 341 (564)
+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+......+. +.+++.+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~ 232 (325)
T cd05602 157 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQ 232 (325)
T ss_pred cCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC----CCCCHHHHHHHHHHcc
Confidence 79999999999985 589999999999999999999999999888888888776544332 4589999999999999
Q ss_pred cCCCCCCCHH----HHhcCCCcCCC
Q 008475 342 SQPSERLTAH----EVLCHPWICEN 362 (564)
Q Consensus 342 ~dp~~R~s~~----~vl~hp~~~~~ 362 (564)
.||.+||++. ++++|+||...
T Consensus 233 ~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 233 KDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred cCHHHCCCCCCCHHHHhcCcccCCC
Confidence 9999999876 89999999763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-45 Score=369.74 Aligned_cols=260 Identities=27% Similarity=0.478 Sum_probs=221.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|++..+++.||+|++.+...........+..|+.++..+. |+||+++++++.+.+..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD-CQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence 35999999999999999999999999999999997643333444556788999999886 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||++||+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE---cCCCCEEEEeccceeeccCCC
Confidence 999999999999977 4679999999999999999999999999999999999999 777899999999987665433
Q ss_pred ce--ecccCCCcccchhhhhh------cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC-CCCCCC
Q 008475 258 IF--TDVVGSPYYVAPEVLLK------HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES-DPWPLI 328 (564)
Q Consensus 258 ~~--~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 328 (564)
.. ....||+.|+|||++.+ .++.++|||||||++|+|++|+.||...+..+.+..+......++. .....+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 236 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDV 236 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccC
Confidence 22 23579999999999863 4788999999999999999999999998888888777665433322 223457
Q ss_pred CHHHHHHHHHhcccCCCC--CCCHHHHhcCCCcCCC
Q 008475 329 SDSAKDLIRKMLCSQPSE--RLTAHEVLCHPWICEN 362 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~--R~s~~~vl~hp~~~~~ 362 (564)
++++++||.+||+.++.+ |++++++++||||...
T Consensus 237 ~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 237 SEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred CHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 899999999999876654 5699999999999863
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-47 Score=402.55 Aligned_cols=283 Identities=28% Similarity=0.463 Sum_probs=246.8
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
+++|.++++||+|+||.|.+++++.+++.||+|++.+-..........|..|-.+|..-. .+.|++++-.|+++.++|+
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccceEE
Confidence 467999999999999999999999999999999998755544555667888999998664 8999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
||||++||+|..++.+..++++..++.|+..|+.||..||+.|+|||||||+|||+ |..|++||+|||.+..+..+
T Consensus 153 VMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~~dG 229 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMDADG 229 (1317)
T ss_pred EEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcCCCC
Confidence 99999999999999988899999999999999999999999999999999999999 89999999999988766533
Q ss_pred C-ceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CccCCCCCCCC
Q 008475 257 Q-IFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG--HIDFESDPWPL 327 (564)
Q Consensus 257 ~-~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~ 327 (564)
. .....+|||.|.|||++. +.|+..+|+||+||++|||+.|..||+.++-.+++.+|..- .+.|| .-..
T Consensus 230 ~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP--~~~~ 307 (1317)
T KOG0612|consen 230 TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP--DETD 307 (1317)
T ss_pred cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC--cccc
Confidence 2 455678999999999996 35999999999999999999999999999999999999875 45555 3345
Q ss_pred CCHHHHHHHHHhcccCCCCCCC---HHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhhhhHH
Q 008475 328 ISDSAKDLIRKMLCSQPSERLT---AHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKL 387 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s---~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~~n~~ 387 (564)
+|+++++||.+++ -+|+.|.. ++++-.||||.+..+..-+...+++...+..-.++..+
T Consensus 308 VSeeakdLI~~ll-~~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPevssd~DTsnF 369 (1317)
T KOG0612|consen 308 VSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPEVSSDDDTSNF 369 (1317)
T ss_pred cCHHHHHHHHHHh-cChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCcCCCCCccccc
Confidence 9999999999999 56889998 99999999999988866666666666665555554444
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-45 Score=368.59 Aligned_cols=249 Identities=28% Similarity=0.503 Sum_probs=214.4
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHH-HHHhhcCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQ-IMHHLAGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
++||+|+||.||+|++..+++.||+|++.+...........+..|.. +++.+. ||||+++++++.+....|+|||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLK-HPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCEEEEEEcCCC
Confidence 46999999999999999999999999997654333333445556655 566776 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCCceecc
Q 008475 184 GGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDV 262 (564)
Q Consensus 184 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~~~~~~ 262 (564)
+++|...+.....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ........
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEETTSTF 156 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCCccccc
Confidence 99999999888889999999999999999999999999999999999999 778899999999987532 22333456
Q ss_pred cCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 008475 263 VGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341 (564)
Q Consensus 263 ~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~ 341 (564)
+||+.|+|||++.+ .++.++|||||||++|+|++|..||...+...+.+.+..+...++ +..+..+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~ 232 (321)
T cd05603 157 CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLLH 232 (321)
T ss_pred cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHcc
Confidence 79999999999875 589999999999999999999999999888888888877654433 3478899999999999
Q ss_pred cCCCCCCCH----HHHhcCCCcCC
Q 008475 342 SQPSERLTA----HEVLCHPWICE 361 (564)
Q Consensus 342 ~dp~~R~s~----~~vl~hp~~~~ 361 (564)
.||.+||++ .++++||||..
T Consensus 233 ~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 233 KDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred CCHhhcCCCCCCHHHHhCCCCcCC
Confidence 999999975 59999999975
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-45 Score=375.22 Aligned_cols=252 Identities=18% Similarity=0.310 Sum_probs=207.0
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
...|++.+.||+|+||.||+|.+..+++.||+|.... ..+.+|++++++|+ ||||++++++|......++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAIN-HPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCC-CCCCCCEeEEEEECCeeEE
Confidence 3569999999999999999999999999999996532 34678999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC--
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-- 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-- 255 (564)
|||++ +++|..++.....+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++.....
T Consensus 161 v~e~~-~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll---~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 161 ILPRY-KTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI---NHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEecC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE---cCCCCEEEEeCCccccccccc
Confidence 99999 57899988888889999999999999999999999999999999999999 6778999999999865322
Q ss_pred CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHcC-----------
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET-------QQGIFDAVLKG----------- 316 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~-------~~~~~~~i~~~----------- 316 (564)
.......+||+.|+|||++.+ .++.++|||||||++|||++|..||.... ....+..+...
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 123345689999999999975 59999999999999999999998875432 11111111110
Q ss_pred ---------------CccCC--CCC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 317 ---------------HIDFE--SDP---WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 317 ---------------~~~~~--~~~---~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
....+ .+. ...++.++.+||.+||++||.+|||+.|+|+||||....
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~ 383 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP 383 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence 00000 000 113467899999999999999999999999999998743
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-45 Score=360.74 Aligned_cols=255 Identities=32% Similarity=0.513 Sum_probs=215.1
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++.+.||+|+||.||+|.+..+++.||+|.+.............+.+|+.++++++ |+||+.+++.+.+....|+|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC-CCCeeeeeEEEecCCEEEEEEE
Confidence 677889999999999999999999999999987655444444556778999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 181 LCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 181 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|++|++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.++|+|||++........
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeccceeecCCCcc
Confidence 99999999888543 358999999999999999999999999999999999999 7778899999999876654444
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ---GIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
.....|++.|+|||++.+ .++.++||||+||++|+|++|..||...... .....+... ........+++++.+
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 234 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE---VQEEYSEKFSPDARS 234 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh---hhhhcCccCCHHHHH
Confidence 445678999999999974 5899999999999999999999999865432 122222111 111223457899999
Q ss_pred HHHHhcccCCCCCCC-----HHHHhcCCCcCCC
Q 008475 335 LIRKMLCSQPSERLT-----AHEVLCHPWICEN 362 (564)
Q Consensus 335 li~~~l~~dp~~R~s-----~~~vl~hp~~~~~ 362 (564)
||.+||+.||++||| ++++++||||+..
T Consensus 235 li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 235 LCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred HHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 999999999999999 9999999999763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-45 Score=364.65 Aligned_cols=246 Identities=26% Similarity=0.390 Sum_probs=213.3
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
-++.+++++.||+|-||.||+|.+.. ...||+|.++.... ..+.+.+|+++|++|+ |+|||++++++..+..+|
T Consensus 204 ~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~piy 277 (468)
T KOG0197|consen 204 PREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSM----SPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEPIY 277 (468)
T ss_pred cHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecccc----ChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCceE
Confidence 33457778999999999999999753 34899999976533 2346779999999998 999999999999988999
Q ss_pred EEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQ--RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
||||||+.|+|.++|.. .+.+...+...++.||++|++||+++++|||||...|||| +++..+||+|||+|+...
T Consensus 278 IVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 278 IVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLIG 354 (468)
T ss_pred EEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEcccccccccC
Confidence 99999999999999987 4568999999999999999999999999999999999999 888899999999999655
Q ss_pred CCCceec--ccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQIFTD--VVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~~~~~--~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.+.+... ..-...|.|||.+. +.++.+||||||||+||||+| |+.||.+.+..++++.+.+|.....+ ..+|+
T Consensus 355 d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P---~~CP~ 431 (468)
T KOG0197|consen 355 DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRP---EGCPD 431 (468)
T ss_pred CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCC---CCCCH
Confidence 4443222 12234699999998 679999999999999999999 99999999999999999998655433 46999
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHh
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVL 354 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl 354 (564)
++.+++..||+.+|++|||++.+.
T Consensus 432 ~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 432 EVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HHHHHHHHHhhCCcccCCCHHHHH
Confidence 999999999999999999998553
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=360.15 Aligned_cols=255 Identities=27% Similarity=0.418 Sum_probs=208.2
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc--CCCCccEEEEEEec-----C
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA--GHKNIVTIKGAYED-----S 172 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~-----~ 172 (564)
+|++.+.||+|+||.||+|.+..+++.||+|.+..... .........+|+.+++.+. +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTN-EDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcC-CCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 48899999999999999999999999999999875432 1222234567787777664 49999999998864 3
Q ss_pred CeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 173 LCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
..+++||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGQVKLADFGLA 155 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccCcc
Confidence 45899999996 5888888654 348999999999999999999999999999999999999 67789999999999
Q ss_pred cccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc-----cCC---
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI-----DFE--- 321 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-----~~~--- 321 (564)
.............+++.|+|||++.+ .++.++||||+||++|+|++|.+||.+....+.+..+..... .++
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 87655444455678999999999874 589999999999999999999999988776655554432110 000
Q ss_pred ---------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 322 ---------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 322 ---------------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
....+.+++.+.+||.+||++||++|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 01123578889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-45 Score=330.74 Aligned_cols=259 Identities=25% Similarity=0.333 Sum_probs=222.9
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
.+.+..||.|+.|.|++++.+.+|...|||.+.+.. +.+..+++...+.++....+.|+||+-+|+|..+..++|.||
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 556778999999999999999999999999997654 677788899999998877678999999999999999999999
Q ss_pred ccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 181 LCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 181 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
.|. -.+..+++. .++++|..+-.+..-++.||.||-+ ++|||||+||+|||+ |+.|++||||||++...-.+..
T Consensus 172 lMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeecccc
Confidence 993 344444433 4679999999999999999999975 689999999999999 9999999999999988877777
Q ss_pred eecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 259 FTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAE-TQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.+...|-+.|||||.+. ..|+.++||||||++++||.||+.||.+. ...+++-.|.+... ...+.-..+|+.++
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP-P~L~~~~gFSp~F~ 326 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP-PLLPGHMGFSPDFQ 326 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC-CCCCcccCcCHHHH
Confidence 77888999999999996 25999999999999999999999999873 45677777777443 22223344899999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICENGVAP 366 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~ 366 (564)
+|+..||.+|+.+||.+.++|+|||+..+...+
T Consensus 327 ~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~ 359 (391)
T KOG0983|consen 327 SFVKDCLTKDHRKRPKYNKLLEHPFIKRYETAE 359 (391)
T ss_pred HHHHHHhhcCcccCcchHHHhcCcceeecchhh
Confidence 999999999999999999999999998766543
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=369.94 Aligned_cols=258 Identities=28% Similarity=0.469 Sum_probs=210.4
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC---
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--- 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--- 172 (564)
.+.++|++.+.||+|+||.||+|.+..+|..||+|++.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 95 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVN-HKNIISLLNVFTPQKSL 95 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCCc
Confidence 35577999999999999999999999999999999996543 23445567889999999997 99999999998654
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
..+|+||||+.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~---~~~~~~kl~Dfg~ 169 (359)
T cd07876 96 EEFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 169 (359)
T ss_pred cccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEecCCC
Confidence 357999999964 6766664 358899999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc-------------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK------------- 315 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~------------- 315 (564)
+.............+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+.+
T Consensus 170 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 170 ARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred ccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 986554444456788999999999985 589999999999999999999999987765433322211
Q ss_pred ---------CCccCCC----------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 316 ---------GHIDFES----------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 316 ---------~~~~~~~----------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
....++. ......++++++||.+||..||++|||+.|+|+||||..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 0000000 011124678999999999999999999999999999975
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-44 Score=364.86 Aligned_cols=256 Identities=24% Similarity=0.360 Sum_probs=215.4
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.++||+|+||.||+|.+..++..+|+|.+.... .......+.+|+++++.+. ||||+++++++.+++.+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCcccceeEEEEECCEEEE
Confidence 356999999999999999999999999999999886542 3445667899999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL-GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||+++++|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||++.....
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~- 156 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID- 156 (333)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE---cCCCCEEEeeCCcchhhhh-
Confidence 999999999999998888899999999999999999999985 79999999999999 6778899999999876432
Q ss_pred CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---------------------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL--------------------- 314 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~--------------------- 314 (564)
.......|+..|+|||++.+ .++.++|||||||++|+|++|+.||.......+...+.
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (333)
T cd06650 157 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGR 236 (333)
T ss_pred hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccc
Confidence 22344678999999999975 58899999999999999999999997665443322110
Q ss_pred -----------------------cCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 315 -----------------------KGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 315 -----------------------~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.... +......++.++++||.+||++||++|||+.+++.||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 237 PLSSYGPDSRPPMAIFELLDYIVNEPP--PKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred hhhhhcccccccccHHHHHHHHhcCCC--ccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 0000 000112357899999999999999999999999999999863
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-44 Score=357.08 Aligned_cols=259 Identities=30% Similarity=0.466 Sum_probs=219.2
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|+..+.||+|+||+||+|.+..+++.||+|.+.............+.+|+++++.++ |+||+.+.+.+..+...|+|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN-SQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC-CcCceeEEEEEecCCEEEEEEE
Confidence 677889999999999999999999999999997654433444556788999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 181 LCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 181 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|+++++|..++... ..+++..+..++.|++.||.|||+.||+||||||+||++ ++++.+||+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---CCCCCEEEecCCcceecCCCCc
Confidence 99999998888653 369999999999999999999999999999999999999 6778899999999876544444
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
.....|++.|+|||++.+ .++.++|+|||||++|+|++|..||...........+..............++.++.+|+.
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICK 237 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHH
Confidence 455678999999999874 5899999999999999999999999887665444444332222222233457899999999
Q ss_pred HhcccCCCCCCC-----HHHHhcCCCcCCCC
Q 008475 338 KMLCSQPSERLT-----AHEVLCHPWICENG 363 (564)
Q Consensus 338 ~~l~~dp~~R~s-----~~~vl~hp~~~~~~ 363 (564)
+||+.||++||+ +.+++.||||+...
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05632 238 MLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN 268 (285)
T ss_pred HHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence 999999999999 88999999998753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=373.20 Aligned_cols=257 Identities=27% Similarity=0.422 Sum_probs=215.4
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-----eE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-----CV 175 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-----~~ 175 (564)
|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+.+|+.+++.++ ||||+++++++.... ..
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFK-HDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCC-CCCcCCHhheecCCCccccceE
Confidence 778899999999999999999999999999986432 23345567889999999997 999999999998776 79
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|+||||+. ++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeeccc
Confidence 99999995 6888888877889999999999999999999999999999999999999 7788999999999976543
Q ss_pred C--CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC---------------
Q 008475 256 G--QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG--------------- 316 (564)
Q Consensus 256 ~--~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~--------------- 316 (564)
. .......+++.|+|||++.+ .++.++||||+||++|||++|+.||.+.+....+..+.+.
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 235 (372)
T cd07853 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEG 235 (372)
T ss_pred CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHH
Confidence 2 22334567899999999875 4789999999999999999999999888776655544321
Q ss_pred --------CccCCC-----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 317 --------HIDFES-----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 317 --------~~~~~~-----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
....+. ......++++.+||.+||+.||.+|||+.++|+||||.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 236 ARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred HHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 000000 11234588999999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-44 Score=367.98 Aligned_cols=258 Identities=28% Similarity=0.437 Sum_probs=213.1
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC---
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--- 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--- 172 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~~~~~ 98 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSL 98 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcC-CCCccccceeecccccc
Confidence 35577999999999999999999999999999999986533 23445567889999999997 99999999988643
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
..+|+||||+. ++|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 99 ~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~ 172 (364)
T cd07875 99 EEFQDVYIVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 172 (364)
T ss_pred cccCeEEEEEeCCC-CCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE---CCCCcEEEEeCCC
Confidence 35799999995 477776643 58899999999999999999999999999999999999 7778999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc---------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID--------- 319 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--------- 319 (564)
+.............+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+......
T Consensus 173 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred ccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 987655444556788999999999985 5899999999999999999999999888766655554331100
Q ss_pred -------------C----------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 320 -------------F----------------ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 320 -------------~----------------~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+ ........+..+++||.+||..||.+|||+.++|+||||..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 0 00001123568899999999999999999999999999975
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-44 Score=355.41 Aligned_cols=249 Identities=28% Similarity=0.458 Sum_probs=209.4
Q ss_pred ccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCCc
Q 008475 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGE 186 (564)
Q Consensus 107 lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 186 (564)
||+|+||.||++.+..+|+.||+|.+.............+..|+++++.+. ||||+++++++..+..+|+||||++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN-SPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC-CCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 799999999999999999999999997544433333445667999999996 9999999999999999999999999999
Q ss_pred hHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecccC
Q 008475 187 LFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264 (564)
Q Consensus 187 L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~g 264 (564)
|..++.... .+++..+..++.||+.||.|||+.||+||||||+||++ +.++.++|+|||++.............|
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQRAG 156 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE---cCCCCEEEeeceeeeecCCCceeeccCC
Confidence 988876543 58899999999999999999999999999999999999 6778999999999887665544455678
Q ss_pred CCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHh
Q 008475 265 SPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ----QGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339 (564)
Q Consensus 265 t~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 339 (564)
+..|+|||++.+ .++.++||||+||++|+|++|..||..... ..+...+....... ....+++++.+||.+|
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~ 233 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF---EHQNFTEESKDICRLF 233 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc---ccccCCHHHHHHHHHH
Confidence 999999999874 589999999999999999999999976432 23333333333222 2235789999999999
Q ss_pred cccCCCCCCCH----HHHhcCCCcCCC
Q 008475 340 LCSQPSERLTA----HEVLCHPWICEN 362 (564)
Q Consensus 340 l~~dp~~R~s~----~~vl~hp~~~~~ 362 (564)
|+.||++||++ ++++.||||+..
T Consensus 234 L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 234 LAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred hccCHhhCCCCccchhhhhcChhhcCC
Confidence 99999999999 778899999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-46 Score=359.06 Aligned_cols=257 Identities=31% Similarity=0.487 Sum_probs=228.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|...++||+|+||.||-|+-+.||+.||.|.+.+..+..........+|-.||.++. .+.||.+--.|++.+.+|+|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~-s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS-SPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc-cCcEEEEeeeecCCCceEEE
Confidence 45788899999999999999999999999999998776655555566789999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 179 MELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+..|+||+|.-+|.+-+ .+++..++.++.+|+.||++||+.+||+|||||+|||+ |+.|+++|+|+|+|..+..+
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEEecCCC
Confidence 99999999988886654 79999999999999999999999999999999999999 99999999999999999999
Q ss_pred CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHcCCccCCCCCCCCCCHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ----GIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
+.....+||.+|||||++.+ .|+...|+|||||+||||+.|+.||...... ++-+.++..... ....+|++
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~e----y~~kFS~e 416 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEE----YSDKFSEE 416 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhh----cccccCHH
Confidence 98888899999999999984 5999999999999999999999999765433 344444444333 33568999
Q ss_pred HHHHHHHhcccCCCCCC-----CHHHHhcCCCcCCCC
Q 008475 332 AKDLIRKMLCSQPSERL-----TAHEVLCHPWICENG 363 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~-----s~~~vl~hp~~~~~~ 363 (564)
+++|.+.+|.+||++|. ++++|.+||||+..+
T Consensus 417 akslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ln 453 (591)
T KOG0986|consen 417 AKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLN 453 (591)
T ss_pred HHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCC
Confidence 99999999999999998 567999999999754
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=354.71 Aligned_cols=254 Identities=41% Similarity=0.669 Sum_probs=214.7
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++++.||+|+||+||+|++..+++.||+|++..... .........+|+.++++++ ||||+++++++......++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI-EEEEREENIREIKILRRLR-HPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH-HHHHHHHHHHHHHHHHHHT-BTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc-cccccchhhhhhhcccccc-cccccccccccccccccccccc
Confidence 7889999999999999999999999999999976542 2222333456999999996 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc-CCCCce
Q 008475 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIF 259 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~-~~~~~~ 259 (564)
++.+++|.+++...+.+++..+..++.||+.||.+||++||+|+||||+||++ +.++.++|+|||.+... ......
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~~~~~~~~ 155 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKLSENNENF 155 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEESTSTTSEB
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccc
Confidence 99999999999888889999999999999999999999999999999999999 77889999999998763 334455
Q ss_pred ecccCCCcccchhhhh--hcCCCcchHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 260 TDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAET---QQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
....++..|+|||++. ..++.++||||+|+++|+|++|..||.... .......................+..+.+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRD 235 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHH
Confidence 6678899999999987 458999999999999999999999998873 33333333332222222211223489999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+|.+||+.||++||++.++++||||
T Consensus 236 li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 236 LIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHHccCChhHCcCHHHHhcCCCC
Confidence 9999999999999999999999997
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-44 Score=367.36 Aligned_cols=259 Identities=27% Similarity=0.435 Sum_probs=211.5
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC---
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--- 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--- 172 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++ ||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 91 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKSL 91 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhC-CCchhceeeeeeccccc
Confidence 35577999999999999999999999999999999986543 23445667889999999997 99999999998643
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
..+|+||||+++ +|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 92 ~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---~~~~~~kl~Dfg~ 165 (355)
T cd07874 92 EEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 165 (355)
T ss_pred cccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---CCCCCEEEeeCcc
Confidence 357999999964 67676643 58899999999999999999999999999999999999 7778999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG------------ 316 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~------------ 316 (564)
+.............+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+...
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred cccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 987655444556789999999999975 5899999999999999999999999877654433322110
Q ss_pred ----------CccC----------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 317 ----------HIDF----------------ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 317 ----------~~~~----------------~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
...+ ........+.++++||.+||..||++|||+.|+|+||||...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 0000 000112245788999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=361.97 Aligned_cols=258 Identities=26% Similarity=0.398 Sum_probs=213.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|.+.+.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.++++++ ||||+++++++..+...++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCC-CCCcceEEEEEeeCCeEEEE
Confidence 459999999999999999999999999999999865432 222345678999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|||+++ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 83 FEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPT 158 (309)
T ss_pred EeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECccccceecCCCc
Confidence 999964 888877654 458999999999999999999999999999999999999 77789999999998764322
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc----------------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI---------------- 318 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~---------------- 318 (564)
.......+++.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+....+.+...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence 22334567899999999864 488999999999999999999999988776655544432110
Q ss_pred ---cCCC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 319 ---DFES-------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 319 ---~~~~-------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.++. ...+.+++++.+||.+||..||.+|||+.++|+||||....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 0000 11235788999999999999999999999999999998644
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-45 Score=368.05 Aligned_cols=255 Identities=38% Similarity=0.654 Sum_probs=237.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
..|.+.+.||+|.|++|.+|++..++..||||.|.+... +....+++.+|+++|+.|. |||||+++.+.+....+|+|
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-n~~~~~k~~rev~imk~l~-HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-NPSKRQKLGREVDIMKSLN-HPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc-ChHHHHHHHHHHHHHHhcC-CcceeeeeeeeeecceeEEE
Confidence 349999999999999999999999999999999987765 4445566999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|||+.+|.+++++.+.+++.+..++.++.|++.|++|||+++|+|||||++|||| +.+.++||+|||++..+..+..
T Consensus 134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~~~~~ 210 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFDYGLM 210 (596)
T ss_pred EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeeccccc
Confidence 9999999999999999999999999999999999999999999999999999999 8888999999999999998888
Q ss_pred eecccCCCcccchhhhhhc--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLKH--YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
..+.+|++.|.|||++.+. -++.+|+||+|++||-|+.|.+||.+.+-.++-..++.+.+..+.. ++-++.+||
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~----ms~dce~lL 286 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFY----MSCDCEDLL 286 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccce----eechhHHHH
Confidence 8999999999999999963 5789999999999999999999999999888888888888877653 788999999
Q ss_pred HHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+++|.++|.+|++.+++..|.|....
T Consensus 287 rk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 287 RKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred HHhhccCccccCCHHHhhhhcccchh
Confidence 99999999999999999999999753
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-44 Score=369.22 Aligned_cols=255 Identities=23% Similarity=0.379 Sum_probs=207.2
Q ss_pred ccccceeecccccccCCeEEEEEEEc--cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEI--ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
.+..+|.+.+.||+|+||.||+|... .++..||+|.+.... ...+|+.+++.+. ||||+++++++....
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l~-h~~iv~~~~~~~~~~ 159 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTIS-HRAIINLIHAYRWKS 159 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhcC-CCCccceeeeEeeCC
Confidence 34567999999999999999999754 356789999886432 3457999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.+|+|||++ +++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++...
T Consensus 160 ~~~lv~e~~-~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 160 TVCMVMPKY-KCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAACKL 235 (392)
T ss_pred EEEEEehhc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCcccccc
Confidence 999999999 56898988777889999999999999999999999999999999999999 77889999999998765
Q ss_pred CCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHcC----CccCCC
Q 008475 254 KPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ---GIFDAVLKG----HIDFES 322 (564)
Q Consensus 254 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~---~~~~~i~~~----~~~~~~ 322 (564)
.... ......||+.|+|||++.+ .|+.++|||||||++|||++|+.||.+.... ..+..+.+. ...++.
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 4322 1234679999999999984 5899999999999999999999999765421 122222110 000000
Q ss_pred -----------------------CC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 323 -----------------------DP---WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 323 -----------------------~~---~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+. ...++.++.+||.+||..||++|||+.++|.||||.+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence 00 013467889999999999999999999999999998743
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-45 Score=348.85 Aligned_cols=273 Identities=26% Similarity=0.399 Sum_probs=222.0
Q ss_pred CCcceeeecccccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCC-C-
Q 008475 83 DNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH-K- 160 (564)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~- 160 (564)
+......+....+.+..+|.+.+.+|+|.||.|..|.+..++..||||+++.- ....++.+-|+++|+++..+ |
T Consensus 73 dD~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~ 148 (415)
T KOG0671|consen 73 DDKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPN 148 (415)
T ss_pred CCCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCC
Confidence 33334445556777889999999999999999999999999999999999642 34556778899999999533 2
Q ss_pred ---CccEEEEEEecCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeec
Q 008475 161 ---NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN 235 (564)
Q Consensus 161 ---niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~ 235 (564)
-+|++.++|...++.|||+|.+ |.+++++|..++ +++...++.+++||+.++.+||+.+++|.||||+|||+.+
T Consensus 149 g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvs 227 (415)
T KOG0671|consen 149 GKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVS 227 (415)
T ss_pred CceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEec
Confidence 3788999999999999999999 779999998754 5899999999999999999999999999999999999954
Q ss_pred CC-----------------CCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhC
Q 008475 236 KD-----------------DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSG 297 (564)
Q Consensus 236 ~~-----------------~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg 297 (564)
.+ ....|+|+|||.|..... .....+.|..|+|||++++ .++..+||||+||||+||+||
T Consensus 228 s~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e--~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG 305 (415)
T KOG0671|consen 228 SEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE--HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTG 305 (415)
T ss_pred cceEEEeccCCccceeccCCCcceEEEecCCcceecc--CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeecc
Confidence 22 245699999999987543 3467889999999999997 699999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHc---------------------CCccCCCCCCCC---------------------CCHHHHHH
Q 008475 298 VPPFWAETQQGIFDAVLK---------------------GHIDFESDPWPL---------------------ISDSAKDL 335 (564)
Q Consensus 298 ~~pf~~~~~~~~~~~i~~---------------------~~~~~~~~~~~~---------------------~s~~~~~l 335 (564)
...|...+..+.+..+.+ +.+.++...... -..++.||
T Consensus 306 ~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDL 385 (415)
T KOG0671|consen 306 ETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDL 385 (415)
T ss_pred ceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHH
Confidence 999988776664433221 122221111000 12368899
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
|++||..||.+|+|+.|+|.||||+..
T Consensus 386 l~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 386 LRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred HHHHHccCccccccHHHHhcCHHhhcC
Confidence 999999999999999999999999863
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-45 Score=361.93 Aligned_cols=253 Identities=28% Similarity=0.459 Sum_probs=223.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
..|.=++.||.|+||.||.|++..+.+.||||.+......+.+..+.+.+|+.+|++|+ |||++.+-|+|-.+...|||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre~TaWLV 104 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLREHTAWLV 104 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeeccchHHHH
Confidence 34666889999999999999999999999999998777667778889999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRII-QRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||||- |+-.+++. .++++.+-++..|+.+.+.||.|||+++.||||||..|||+ .+.|.|||+|||.|....+
T Consensus 105 MEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL---se~g~VKLaDFGSAsi~~P-- 178 (948)
T KOG0577|consen 105 MEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL---SEPGLVKLADFGSASIMAP-- 178 (948)
T ss_pred HHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe---cCCCeeeeccccchhhcCc--
Confidence 99994 56666664 35679999999999999999999999999999999999999 7889999999999987655
Q ss_pred ceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.++++|||.|||||++. |+|+-++||||||++..||.-.++|+...+....+-.|.+...+ .-....+|+.+.
T Consensus 179 -AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesP--tLqs~eWS~~F~ 255 (948)
T KOG0577|consen 179 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP--TLQSNEWSDYFR 255 (948)
T ss_pred -hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCC--CCCCchhHHHHH
Confidence 45689999999999996 68999999999999999999999999888876666666544322 222345789999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.||..||++-|.+|||.+++|.|+|+..
T Consensus 256 ~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 256 NFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred HHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 9999999999999999999999999865
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=362.56 Aligned_cols=253 Identities=23% Similarity=0.387 Sum_probs=218.8
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
.+...+...++..||+|.||+||+|.+.. .||||++..... +.+..+.|++|+..+++-+ |.||+-+.|++....
T Consensus 387 WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~p-t~~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 387 WEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDP-TPEQLQAFKNEVAVLKKTR-HENILLFMGACMNPP 461 (678)
T ss_pred cccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCC-CHHHHHHHHHHHHHHhhcc-hhhheeeehhhcCCc
Confidence 34445667889999999999999999764 699999987665 5668999999999999998 999999999998877
Q ss_pred eEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 174 CVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
. .||+.+|+|.+|+.+++. +.+|.....+.|++||+.|+.|||.++|||||||..||++ .+++.|||+|||++..
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATV 537 (678)
T ss_pred e-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceee
Confidence 7 999999999999999975 4579999999999999999999999999999999999999 7779999999999865
Q ss_pred c---CCCCceecccCCCcccchhhhhh----cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC-CC
Q 008475 253 F---KPGQIFTDVVGSPYYVAPEVLLK----HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES-DP 324 (564)
Q Consensus 253 ~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-~~ 324 (564)
. ..........|...|||||+++. .|+..+|||||||++|||+||..||......+++-++-+|...... ..
T Consensus 538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~ 617 (678)
T KOG0193|consen 538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKI 617 (678)
T ss_pred eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhh
Confidence 3 23344556778889999999972 4999999999999999999999999988888888877777433221 23
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
...++.++++|+..||..++++||.+.+||.
T Consensus 618 ~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 618 RSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred hccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 3457789999999999999999999999887
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-44 Score=378.47 Aligned_cols=256 Identities=28% Similarity=0.440 Sum_probs=221.7
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC----
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL---- 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---- 173 (564)
.++|++.+.||+|+||+||+|++..+++.||||++..... .......+.+|+.++..+. |+||+++++.+....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~-h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCD-FFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCC-CCcEEEeecceecccccCc
Confidence 4579999999999999999999999999999999976543 4555677889999999997 999999988775432
Q ss_pred ----eEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEe
Q 008475 174 ----CVHIVMELCAGGELFDRIIQR----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAI 245 (564)
Q Consensus 174 ----~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~ 245 (564)
.+++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+|+||||||+|||+ +.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl---~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL---CSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---eCCCCEEEE
Confidence 378999999999999988653 468999999999999999999999999999999999999 677899999
Q ss_pred eCCCccccCCC---CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC
Q 008475 246 DFGLSVFFKPG---QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE 321 (564)
Q Consensus 246 DfG~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 321 (564)
|||+++..... ......+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+..+++..+..+....
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~- 264 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP- 264 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC-
Confidence 99998765432 22345679999999999985 59999999999999999999999999988888888877765432
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 322 SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 322 ~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
..+.+++++.+||.+||..||.+||++.++++|||++.
T Consensus 265 --~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 265 --LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred --CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 22468899999999999999999999999999999875
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-46 Score=369.70 Aligned_cols=259 Identities=29% Similarity=0.444 Sum_probs=226.0
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+.++.|+|+..||.|+||.||+|..+.++...|.|+|... +.+..+.+.-||+||..+. ||+||+|++.|..++.+
T Consensus 29 nP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~Cd-HP~ivkLl~ayy~enkL 104 (1187)
T KOG0579|consen 29 NPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECD-HPVIVKLLSAYYFENKL 104 (1187)
T ss_pred CHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCC-ChHHHHHHHHHhccCce
Confidence 3456799999999999999999999999988999988543 6777889999999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
||+.|||.||-+...+.. ...+++.++..+++|++.||.|||+++|||||||..|||+ .-+|.++|+|||.+....
T Consensus 105 wiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~---TldGdirLADFGVSAKn~ 181 (1187)
T KOG0579|consen 105 WILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILL---TLDGDIRLADFGVSAKNK 181 (1187)
T ss_pred EEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEE---EecCcEeeecccccccch
Confidence 999999999988776655 4569999999999999999999999999999999999999 677899999999875432
Q ss_pred -CCCceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 255 -PGQIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 255 -~~~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
.-....+++|||.|||||+.. ..|++++||||||++|.||..+.+|....++..++-.|.+...+-.. .+..
T Consensus 182 ~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLl-qPS~ 260 (1187)
T KOG0579|consen 182 STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLL-QPSH 260 (1187)
T ss_pred hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCccc-Ccch
Confidence 223445789999999999985 35999999999999999999999999999988888777665433222 2245
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
++..+.|||.+||.+||..||++.++|+||||.+.
T Consensus 261 Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 261 WSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred hhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 78899999999999999999999999999999864
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-44 Score=377.07 Aligned_cols=253 Identities=28% Similarity=0.409 Sum_probs=219.9
Q ss_pred cceeecccccccCCeEEEEEEEccC-CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIAT-GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
..|.+.+.||+|+||.||+|.+..+ +..||+|.+... .......+.+|+.+++.+. ||||+++++++...+.+||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACD-HFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEEECCEEEE
Confidence 3499999999999999999998877 788999976432 3444567788999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 178 VMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
||||++||+|.+++.. ..++++..+..++.||+.||.|||+++|+||||||+|||+ +..+.+||+|||++...
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL---MPTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE---CCCCcEEEEeCcCceec
Confidence 9999999999887754 3468999999999999999999999999999999999999 77789999999999875
Q ss_pred CCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 254 KPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 254 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+++..+..+..... ...++
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~s 296 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPF---PCPVS 296 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---CccCC
Confidence 4332 2345679999999999975 589999999999999999999999999888888888877654321 23578
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+++.+||.+||..||++||++.+++.|||++.
T Consensus 297 ~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 297 SGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 99999999999999999999999999999864
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=388.30 Aligned_cols=261 Identities=32% Similarity=0.505 Sum_probs=217.6
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CC
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SL 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~ 173 (564)
...+.|++++.||.|+||.||+|++..++..||+|++..... .......+..|+.+++.|. |||||+++++|.. ..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELK-HKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEecCCC
Confidence 344679999999999999999999999999999999875543 4445677899999999997 9999999998854 46
Q ss_pred eEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-------CCEeecCCCCcEEeecC------
Q 008475 174 CVHIVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSL-------GVMHRDLKPENFLLVNK------ 236 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~-------~iiH~Dlkp~NIll~~~------ 236 (564)
.+|||||||++++|.++|.. .+.+++..++.|+.||+.||.|||+. +||||||||+||||...
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 79999999999999998865 25799999999999999999999985 49999999999999531
Q ss_pred --------CCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 008475 237 --------DDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAET 305 (564)
Q Consensus 237 --------~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~ 305 (564)
+....+||+|||++............+||+.|+|||++.+ .++.++||||||||||+|++|..||....
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 2344699999999987655444456689999999999863 48899999999999999999999997655
Q ss_pred HH-HHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 306 QQ-GIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 306 ~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.. .++..+..+ .. .+...++.++.+||..||..+|.+||++.|+|.|||++..
T Consensus 248 ~~~qli~~lk~~-p~---lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 248 NFSQLISELKRG-PD---LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred cHHHHHHHHhcC-CC---CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 43 333333332 22 2234578999999999999999999999999999999854
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=346.81 Aligned_cols=254 Identities=30% Similarity=0.488 Sum_probs=217.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC--HHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS--REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.|.+.+.||+|++|.||+|.+..+++.||+|.+....... ....+.+.+|+.+++++. ||||+++++++.+....++
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HERIVQYYGCLRDDETLSI 81 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEccCCeEEE
Confidence 4889999999999999999999999999999987543221 223567889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|+||+++++|.+.+...+.+++..+..++.|++.||.|||+.||+||||+|+||++ +.++.++|+|||++.......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv---~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceeccccc
Confidence 99999999999999888889999999999999999999999999999999999999 677889999999987654321
Q ss_pred c----eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 258 I----FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 258 ~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
. .....++..|+|||++.+ .++.++||||||+++|+|++|+.||...........+........ ....++..+
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (263)
T cd06625 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQ--LPSHVSPDA 236 (263)
T ss_pred cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCC--CCccCCHHH
Confidence 1 133567889999999985 488999999999999999999999987766555555444332222 224578999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.++|.+||..+|.+|||+.++++||||
T Consensus 237 ~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 237 RNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 999999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=352.41 Aligned_cols=254 Identities=35% Similarity=0.639 Sum_probs=226.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|+++++++. ||||+++++++.....+|+||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEEE
Confidence 5899999999999999999999999999999997655444555678899999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF 259 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~ 259 (564)
||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||+|+|||+ +.++.+||+|||++...... .
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~--~ 155 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGR--T 155 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEeeCCCccccCCC--C
Confidence 999999999999888889999999999999999999999999999999999999 77789999999998876543 3
Q ss_pred ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 338 (564)
....+++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+..+...++ ..++..+.++|.+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~ 231 (290)
T cd05580 156 YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP----SFFSPDAKDLIRN 231 (290)
T ss_pred CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC----ccCCHHHHHHHHH
Confidence 44578899999998874 578899999999999999999999988887777777776655443 3468999999999
Q ss_pred hcccCCCCCC-----CHHHHhcCCCcCCCC
Q 008475 339 MLCSQPSERL-----TAHEVLCHPWICENG 363 (564)
Q Consensus 339 ~l~~dp~~R~-----s~~~vl~hp~~~~~~ 363 (564)
||..||.+|+ +++++++||||....
T Consensus 232 ~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 232 LLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred HccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 9999999999 999999999997643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-44 Score=352.89 Aligned_cols=255 Identities=25% Similarity=0.408 Sum_probs=209.0
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
..|+++++||+||.+.||++... +...||+|++.-.. .+...+..+.+|+.+|.+|++|.+||+|+++-..++.+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 45999999999999999999954 45577777764333 36677889999999999999999999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQRGHY-SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~-~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||+= ..+|..+|.+.... +.-.++.+..|++.|+.++|.+||||.||||.|+|+. .|.+||+|||+|..+.++.
T Consensus 439 mE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQPDT 513 (677)
T ss_pred eecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCccc
Confidence 9985 67999999877654 4358899999999999999999999999999999994 5789999999999887654
Q ss_pred c---eecccCCCcccchhhhhh------------cCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCccCC
Q 008475 258 I---FTDVVGSPYYVAPEVLLK------------HYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFE 321 (564)
Q Consensus 258 ~---~~~~~gt~~y~aPE~~~~------------~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~ 321 (564)
. ....+||+.|||||.+.. +.+.++||||||||||+|+.|++||.... ...-+..|....-..+
T Consensus 514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Ie 593 (677)
T KOG0596|consen 514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIE 593 (677)
T ss_pred cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCcccc
Confidence 2 245789999999999851 15678999999999999999999996544 3344455554433222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 322 SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 322 ~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.+..+. ..++.++++.||.+||++|||+.++|+|||+..
T Consensus 594 fp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 594 FPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred ccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 222221 234999999999999999999999999999975
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=354.18 Aligned_cols=258 Identities=25% Similarity=0.403 Sum_probs=213.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.+. ||||+++++++......++|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcC-CCCcceEEEEEecCCeEEEE
Confidence 459999999999999999999999999999999864432 222345678999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|||+. ++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 83 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 83 FEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPT 158 (301)
T ss_pred Eeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE---CCCCcEEECcCcchhccCCCC
Confidence 99996 5888887653 468999999999999999999999999999999999999 77789999999998764322
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc----------------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI---------------- 318 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~---------------- 318 (564)
.......+++.|+|||++.+ .++.++|||||||++|+|++|++||...+..+....+.....
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccc
Confidence 22234567889999999874 478899999999999999999999988776655544332110
Q ss_pred ---cCCC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 319 ---DFES-------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 319 ---~~~~-------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.++. ...+.+++.+++||.+||+.||.+|||++++|+||||....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0000 01134788999999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-44 Score=364.21 Aligned_cols=259 Identities=25% Similarity=0.429 Sum_probs=212.2
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC---
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--- 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--- 172 (564)
.+.++|++.+.||.|+||.||+|.+..++..||+|++..... .......+.+|+.+++++. ||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMK-HENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcC-CCchhhhhhhhcccccc
Confidence 355779999999999999999999999999999999865322 2334556778999999997 99999999988643
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
...|+++|++ +++|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~ 164 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFGL 164 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE---CCCCCEEEcCCcc
Confidence 4579999998 788877664 4579999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc--------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID-------- 319 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-------- 319 (564)
+..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+......
T Consensus 165 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 165 ARQADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred ceecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 986543 2345678999999999875 4889999999999999999999999877655444433221000
Q ss_pred ---------------CCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 320 ---------------FES----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 320 ---------------~~~----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.+. ..+...++.+.+||.+||..||.+|||+.++|+||||....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~ 305 (343)
T cd07878 243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH 305 (343)
T ss_pred cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence 000 01123567889999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-43 Score=351.78 Aligned_cols=256 Identities=25% Similarity=0.339 Sum_probs=214.8
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|.+..++..+|+|.+.... .......+.+|++++++++ ||||+++++++.+++.+|+||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECN-SPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCEEEEEe
Confidence 5889999999999999999999999999999986432 3445567889999999996 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
||+++++|.+++...+.+++..+..++.||+.||.|||+ .+++||||||+|||+ +.++.+||+|||++...... .
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~-~ 154 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS-M 154 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEE---ecCCcEEEccCCCccccccc-c
Confidence 999999999999888889999999999999999999998 699999999999999 66788999999998765332 2
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC-----------------
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF----------------- 320 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~----------------- 320 (564)
.....+++.|+|||.+.+ .++.++|||||||++|+|++|..||...+.......+.......
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
T cd06615 155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234 (308)
T ss_pred cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCcc
Confidence 345678999999999875 48899999999999999999999997665443332221110000
Q ss_pred -----------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 321 -----------------ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 321 -----------------~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+..+...++.++.+||.+||..+|++|||+.++++||||.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred chhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 001112367899999999999999999999999999999764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-43 Score=346.36 Aligned_cols=255 Identities=29% Similarity=0.451 Sum_probs=220.2
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||.|+||.||+|.+..++..||+|.+.... .......+.+|+.+++.+. ||||+++++++.++..+|+|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEEE
Confidence 5888999999999999999999999999999986543 2344567889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-Cc
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-QI 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~~ 258 (564)
||+++++|.+++... ++++..+..++.|++.||.|||+.+++||||+|+||++ ++++.++|+|||++...... ..
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL---SEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEcccccceeecccccc
Confidence 999999999988765 78999999999999999999999999999999999999 77889999999999876543 23
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
.....+++.|+|||.+.+ .++.++|||||||++|+|++|..||...+.......+..+...... ...++..+.++|.
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 232 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLE--GNKFSKPFKDFVS 232 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCc--ccccCHHHHHHHH
Confidence 344678889999999874 5899999999999999999999999887766666655554322111 1227889999999
Q ss_pred HhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 338 KMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+||..+|++|||++++++||||.+..
T Consensus 233 ~~l~~~p~~Rpt~~~il~~~~~~~~~ 258 (274)
T cd06609 233 LCLNKDPKERPSAKELLKHKFIKKAK 258 (274)
T ss_pred HHhhCChhhCcCHHHHhhChhhcCCC
Confidence 99999999999999999999998743
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-46 Score=343.41 Aligned_cols=254 Identities=27% Similarity=0.422 Sum_probs=219.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|.++.+||+|+||.||+|.++.+|+.+|||.+... .+.+.+.+|+.|++++. .|+||++||.|.....+|||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~-S~yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCK-SKYVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcC-CchhhhhhhhhccCCceEee
Confidence 4488899999999999999999999999999998743 45788999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
||||..|++.+.+.. ++++++.++..+++..+.||+|||...-||||||..|||+ +.+|.+||+|||.|......
T Consensus 107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhhhH
Confidence 999999999998865 5679999999999999999999999999999999999999 77889999999998765433
Q ss_pred CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
...++.+|||.|||||++.. .|..++||||||++..||..|++||....+...+..|-.. .+........+|.++.||
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~-PPPTF~KPE~WS~~F~DF 262 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTK-PPPTFKKPEEWSSEFNDF 262 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCC-CCCCCCChHhhhhHHHHH
Confidence 23457899999999999986 5999999999999999999999999776664433333221 111112224578999999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
|++||.+.|++|-|+.++++|||+++.
T Consensus 263 i~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 263 IRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred HHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 999999999999999999999999874
|
|
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-43 Score=345.24 Aligned_cols=254 Identities=30% Similarity=0.450 Sum_probs=214.6
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.+. ||||+++++.+.....+|+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~-h~~ii~~~~~~~~~~~~~l 83 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCK-HSNIVAYFGSYLRRDKLWI 83 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEE
Confidence 356999999999999999999999999999999986542 233456788999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
||||+++++|.+++...+.+++..+..++.|++.||.|||++||+|+||||+||++ +.++.++|+|||++......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL---TDNGHVKLADFGVSAQITATI 160 (267)
T ss_pred EEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECcceeeeEccCcc
Confidence 99999999999999888899999999999999999999999999999999999999 67788999999998755322
Q ss_pred CceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC-CCCCCCCHH
Q 008475 257 QIFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES-DPWPLISDS 331 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~ 331 (564)
.......|+..|+|||++. +.++.++|||||||++|+|++|..||....+......+.......+. .....++..
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNS 240 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHH
Confidence 1223457899999999974 34888999999999999999999999776654444443333322221 111246889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPW 358 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~ 358 (564)
+.++|.+||..+|++||+++++++|||
T Consensus 241 ~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 241 FHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=359.06 Aligned_cols=250 Identities=22% Similarity=0.328 Sum_probs=202.3
Q ss_pred ccceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
.++|++.++||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.+.+||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 467999999999999999999752 345689999986432 3344567899999999995699999999988754
Q ss_pred -CeEEEEEeccCCCchHHHHHhc---------------------------------------------------------
Q 008475 173 -LCVHIVMELCAGGELFDRIIQR--------------------------------------------------------- 194 (564)
Q Consensus 173 -~~~~lv~e~~~~~~L~~~l~~~--------------------------------------------------------- 194 (564)
..+++||||+++|+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4689999999999999988652
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc---eecccCCC
Q 008475 195 -----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSP 266 (564)
Q Consensus 195 -----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~ 266 (564)
.++++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++........ .....+++
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE---cCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 237778899999999999999999999999999999999 6778999999999976533221 12234567
Q ss_pred cccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH-HHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccC
Q 008475 267 YYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQ-GIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQ 343 (564)
Q Consensus 267 ~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~d 343 (564)
.|+|||++.+ .++.++|||||||++|||++ |..||.+.... .....+..+.... ....+++.+.+||.+||..|
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~d 317 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR---APENATPEIYRIMLACWQGD 317 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHccCC
Confidence 8999999874 58999999999999999997 99999875543 3334444433211 22457899999999999999
Q ss_pred CCCCCCHHHHhc
Q 008475 344 PSERLTAHEVLC 355 (564)
Q Consensus 344 p~~R~s~~~vl~ 355 (564)
|.+|||+.++++
T Consensus 318 p~~RPs~~el~~ 329 (338)
T cd05102 318 PKERPTFSALVE 329 (338)
T ss_pred hhhCcCHHHHHH
Confidence 999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=356.05 Aligned_cols=249 Identities=24% Similarity=0.426 Sum_probs=193.9
Q ss_pred cccccccCCeEEEEEEEc--cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CCeEEEEE
Q 008475 104 GRKLGQGQFGTTYLCTEI--ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SLCVHIVM 179 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~ 179 (564)
+++||+|+||+||+|++. .+++.||+|.+..... ...+.+|+.+++++. ||||+++++++.. +..+|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcC-CCCCcceeeeEecCCCcEEEEEE
Confidence 468999999999999965 4678999999865432 234678999999997 9999999999854 56789999
Q ss_pred eccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC-CCCCcEEEeeCCC
Q 008475 180 ELCAGGELFDRIIQR---------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK-DDDFSLKAIDFGL 249 (564)
Q Consensus 180 e~~~~~~L~~~l~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~-~~~~~~kl~DfG~ 249 (564)
||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+
T Consensus 80 e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 80 DYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred ecc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 999 45887776532 248899999999999999999999999999999999999543 3557899999999
Q ss_pred ccccCCCC----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHH
Q 008475 250 SVFFKPGQ----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQ---------QGIFDAVL 314 (564)
Q Consensus 250 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~---------~~~~~~i~ 314 (564)
+....... ......+|+.|+|||++.+ .++.++||||+||++|+|++|++||..... ...+..+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 98654321 2345678999999999874 489999999999999999999999964332 11111111
Q ss_pred cCCc----------------------------c------CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 315 KGHI----------------------------D------FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 315 ~~~~----------------------------~------~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.... . +........+.++.+||.+||++||.+|||++|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1000 0 0000011235678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-43 Score=347.05 Aligned_cols=256 Identities=28% Similarity=0.477 Sum_probs=213.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++.+. ||||+++++++.....+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEE
Confidence 358999999999999999999999999999999865432 2223456788999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
|||++++.|..++.....+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE---cCCCcEEECccccceecCCCcc
Confidence 9999998888777666779999999999999999999999999999999999999 677889999999998765433
Q ss_pred ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc-----------------
Q 008475 258 IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI----------------- 318 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~----------------- 318 (564)
......++..|+|||.+.+ .++.++|||||||++|+|++|..||.+.+..+....+.+...
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK 235 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc
Confidence 3344567889999999874 478999999999999999999999987766544433322100
Q ss_pred --cCCC--------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 319 --DFES--------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 319 --~~~~--------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
..+. ...+.++..+.+||.+||+.+|++||++.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0000 0123468899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-43 Score=349.32 Aligned_cols=259 Identities=31% Similarity=0.507 Sum_probs=223.5
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|.+..+++.||+|.+.............+.+|+.+++.++ ||||+++++.+..+..+++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE-NPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEecCCEEEEEE
Confidence 4888999999999999999999999999999987654333445567889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||++ +..+.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll---~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE---CCCCCEEEeeCCCccccCcCccc
Confidence 999999999999888889999999999999999999999999999999999999 678899999999886421100
Q ss_pred --------------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC
Q 008475 258 --------------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES 322 (564)
Q Consensus 258 --------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 322 (564)
......++..|+|||.+.+ .++.++|+|||||++|+|++|..||.+....+....+..+....+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 237 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC
Confidence 0112457888999998874 5899999999999999999999999988888888887776555444
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCCCcCCCC
Q 008475 323 DPWPLISDSAKDLIRKMLCSQPSERLT---AHEVLCHPWICENG 363 (564)
Q Consensus 323 ~~~~~~s~~~~~li~~~l~~dp~~R~s---~~~vl~hp~~~~~~ 363 (564)
.. ..++.++.++|.+||+.||++||+ +.++|+||||....
T Consensus 238 ~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 238 GD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred cc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence 32 257899999999999999999997 79999999997643
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-43 Score=341.83 Aligned_cols=252 Identities=33% Similarity=0.538 Sum_probs=216.7
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++....+||||+++++++..+..+|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999999999999999987654333333445566666665554699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecccC
Q 008475 185 GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264 (564)
Q Consensus 185 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~g 264 (564)
++|.+++...+.+++..+..++.||+.||.|||+.+++||||+|+||++ +.++.+||+|||++..... .....+
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~---~~~~~~ 155 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLE---NKKFVG 155 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEeecccceeccc---cccCCC
Confidence 9999999888889999999999999999999999999999999999999 6778899999999876432 234567
Q ss_pred CCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccC
Q 008475 265 SPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQ 343 (564)
Q Consensus 265 t~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~d 343 (564)
+..|+|||.+.+ .++.++||||||+++|+|++|..||...+.......+..+...++......+++++.++|.+||..+
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 235 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD 235 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCC
Confidence 889999999875 4789999999999999999999999988888888877776666555555568999999999999999
Q ss_pred CCCCCC---HHHHhcCCCcCCC
Q 008475 344 PSERLT---AHEVLCHPWICEN 362 (564)
Q Consensus 344 p~~R~s---~~~vl~hp~~~~~ 362 (564)
|++||+ +.|++.||||.+.
T Consensus 236 p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 236 PAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred HHHccCCCcHHHHHcChHhhcC
Confidence 999994 5799999999764
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=363.45 Aligned_cols=250 Identities=28% Similarity=0.451 Sum_probs=217.2
Q ss_pred cccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCC
Q 008475 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGG 185 (564)
Q Consensus 106 ~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 185 (564)
+||+|.||+||.|++..+...+|||.|..+ .....+-+..||.+-++|+ |.|||+++|.+..++.+-|.||-++||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 599999999999999999999999999754 4556677889999999998 999999999999999999999999999
Q ss_pred chHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CCceec
Q 008475 186 ELFDRIIQR-GHY--SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTD 261 (564)
Q Consensus 186 ~L~~~l~~~-~~~--~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~~~~~ 261 (564)
+|..+|... +++ ++..+..+.+||++||.|||++.|||||||-+|||++ +-.|.+||+|||-++.... +....+
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccchhhccCCccccc
Confidence 999999764 777 8899999999999999999999999999999999995 5678999999999877643 234456
Q ss_pred ccCCCcccchhhhh---hcCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 262 VVGSPYYVAPEVLL---KHYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 262 ~~gt~~y~aPE~~~---~~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
+.||..|||||++. +.|+.++|||||||++.||.||++||.... ++... ..-|.+...++.+..+|.+++.||.
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM--FkVGmyKvHP~iPeelsaeak~Fil 813 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM--FKVGMYKVHPPIPEELSAEAKNFIL 813 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh--hhhcceecCCCCcHHHHHHHHHHHH
Confidence 88999999999997 359999999999999999999999997533 33222 2335555555555668899999999
Q ss_pred HhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 338 KMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+|+.+||.+||++.++|.+||++...
T Consensus 814 rcFepd~~~R~sA~~LL~DpFlq~~~ 839 (1226)
T KOG4279|consen 814 RCFEPDPCDRPSAKDLLQDPFLQHNN 839 (1226)
T ss_pred HHcCCCcccCccHHHhccCcccccCC
Confidence 99999999999999999999998763
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-45 Score=346.69 Aligned_cols=274 Identities=28% Similarity=0.465 Sum_probs=244.0
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
..|..+.+||+|+||+|.+|..+.+.+.||||++++.-+....+++--..|-++|.....-|.++++..+|++-+.+|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 34888999999999999999999999999999999888777777888888999998777688999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc-CCCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~-~~~~ 257 (564)
|||+.||+|.-.+++-+++.+..+..++..|+.||-+||++|||+||||.+|||+ +.+|++||.|||+++.- -.+.
T Consensus 429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeecccccccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 89999999999998764 3445
Q ss_pred ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
...+++|||.|+|||++. +.|+.++|+||+||+|||||.|++||.+.+..+++.+|......++. .+|.++.++.
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPK----slSkEAv~ic 581 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPK----SLSKEAVAIC 581 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcc----cccHHHHHHH
Confidence 667899999999999987 67999999999999999999999999999999999999988877764 4899999999
Q ss_pred HHhcccCCCCCCCH-----HHHhcCCCcCCCCC--CCCCCCCHHHHHHHH
Q 008475 337 RKMLCSQPSERLTA-----HEVLCHPWICENGV--APDRSLDPAVLSRLK 379 (564)
Q Consensus 337 ~~~l~~dp~~R~s~-----~~vl~hp~~~~~~~--~~~~~~~~~~~~~~k 379 (564)
+.+|.+.|.+|... ++|-.||||....+ .+.+.+.+++...+|
T Consensus 582 kg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k 631 (683)
T KOG0696|consen 582 KGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIK 631 (683)
T ss_pred HHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCccc
Confidence 99999999999854 68999999987544 233444444444443
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-43 Score=345.85 Aligned_cols=241 Identities=17% Similarity=0.231 Sum_probs=209.2
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec----CCeEEEEEe
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----SLCVHIVME 180 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----~~~~~lv~e 180 (564)
..||+|++|.||+|.. +|+.||||++.+.........+.+.+|+.+|++++ ||||+++++++.+ ...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID-SNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC-CCCEEEEeeeEEecccCCCceEEEEE
Confidence 4689999999999996 68899999997655444445678889999999997 9999999999876 457899999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce
Q 008475 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF 259 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~ 259 (564)
|+++|+|.+++...+.+++.....++.+++.||.|||+ .+++||||||+|||+ +.++.+||+|||++.......
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill---~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV---TENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---CCCCcEEEcccchHhhhcccc--
Confidence 99999999999888889999999999999999999998 599999999999999 778899999999988654322
Q ss_pred ecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
....++..|+|||++.+ .++.++|||||||++|||++|..||.+.+..+++..+..+...+..+ ..+++++.+||
T Consensus 178 ~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~li 255 (283)
T PHA02988 178 FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP--LDCPLEIKCIV 255 (283)
T ss_pred ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--CcCcHHHHHHH
Confidence 24568899999999974 68999999999999999999999999988888888876654443322 35789999999
Q ss_pred HHhcccCCCCCCCHHHHhc
Q 008475 337 RKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~ 355 (564)
.+||+.||++|||+.++++
T Consensus 256 ~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 256 EACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHhcCCcccCcCHHHHHH
Confidence 9999999999999999975
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-43 Score=351.26 Aligned_cols=259 Identities=34% Similarity=0.542 Sum_probs=223.4
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|+||.||+|.+..+++.||+|.+...........+.+..|+++++.+. ||||+++++.+......|+||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEEE
Confidence 5889999999999999999999999999999998765544456677899999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 180 ELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||+.|++|.+++... ..+++..+..++.||+.||.|||+.|++||||||+||++ +.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL---HESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEE---cCCCCEEEeecchhhcccccc
Confidence 999999999988754 468999999999999999999999999999999999999 677899999999976543211
Q ss_pred ------------------------------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH
Q 008475 258 ------------------------------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ 306 (564)
Q Consensus 258 ------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~ 306 (564)
......|+..|+|||++.+ .++.++||||||+++|+|++|..||.+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 1123467889999999875 488899999999999999999999988887
Q ss_pred HHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHHHhcCCCcCCCCC
Q 008475 307 QGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLT----AHEVLCHPWICENGV 364 (564)
Q Consensus 307 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s----~~~vl~hp~~~~~~~ 364 (564)
...+..+......++.. ..+++.+.++|.+||..||++||| +.++|.||||+....
T Consensus 238 ~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 238 DETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred HHHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 77777666554444332 237899999999999999999999 999999999987543
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-43 Score=359.28 Aligned_cols=249 Identities=20% Similarity=0.321 Sum_probs=200.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
..|++.+.||+|+||.||+|++..++..||+|+..+. ....|+.+++++. ||||+++++++......++|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVN-HPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCC-CCCCcChhheEEeCCeeEEE
Confidence 3599999999999999999999999999999975432 2246899999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||++ .++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||+ +..+.+||+|||++.......
T Consensus 136 ~e~~-~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 136 LPHY-SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred EEcc-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCccccccccCc
Confidence 9999 4688888765 4568999999999999999999999999999999999999 777889999999997644433
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHHcCCc---cCCC
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ-----------GIFDAVLKGHI---DFES 322 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~-----------~~~~~i~~~~~---~~~~ 322 (564)
......||+.|+|||++.+ .++.++|||||||++|||+++..|+...... .+...+..... .++.
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 291 (357)
T PHA03209 212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPR 291 (357)
T ss_pred ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCC
Confidence 4455679999999999875 5899999999999999999865554332110 11111111000 0000
Q ss_pred --------------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 323 --------------------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 323 --------------------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.....++.++.+||.+||+.||.+|||+.|||+||||+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 292 DPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 001235678889999999999999999999999999975
|
|
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=344.16 Aligned_cols=257 Identities=32% Similarity=0.486 Sum_probs=220.4
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||.|+||.||+|.+..++..||+|++... .....+.+..|+++++++. ||||+++++.+......|+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEE
Confidence 46699999999999999999999889999999998643 4455677889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 178 VMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.||+|+||+|+||++ +.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhccc
Confidence 99999999999988764 569999999999999999999999999999999999999 77889999999988654322
Q ss_pred -CceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 257 -QIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 257 -~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
.......+++.|+|||++. ..++.++|||||||++|+|++|..||...........+..+..... .....++
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 235 (280)
T cd06611 157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTL-DQPSKWS 235 (280)
T ss_pred ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCc-CCcccCC
Confidence 2233456889999999985 2367799999999999999999999988877766666665433211 1223578
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.++.++|.+||..+|.+||++.++++||||...
T Consensus 236 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 236 SSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 999999999999999999999999999999864
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-43 Score=342.96 Aligned_cols=254 Identities=28% Similarity=0.421 Sum_probs=212.9
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.+++.+. ||||+++++.+.....+++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~-h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECK-HCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEEE
Confidence 356999999999999999999999999999999986432 233456788999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||+|+||++ +.++.+||+|||++.......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeecccc
Confidence 99999999999999888889999999999999999999999999999999999999 677889999999987654321
Q ss_pred -ceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC-CCCCCCCHH
Q 008475 258 -IFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES-DPWPLISDS 331 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~ 331 (564)
......+++.|+|||.+. ..++.++||||+||++|+|++|..||....+......+.......+. .....++..
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSST 240 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHH
Confidence 223456889999999884 23788999999999999999999999766554433333232222111 112346889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPW 358 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~ 358 (564)
+.+||.+||..+|++||+++++|+|+|
T Consensus 241 ~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 241 FHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=340.21 Aligned_cols=251 Identities=35% Similarity=0.599 Sum_probs=218.4
Q ss_pred ccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCCc
Q 008475 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGE 186 (564)
Q Consensus 107 lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 186 (564)
||.|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++.+. ||||+++++.+.++..+|+||||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC-CCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 799999999999999899999999998665544556678999999999996 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecccCCC
Q 008475 187 LFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSP 266 (564)
Q Consensus 187 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~ 266 (564)
|.+++.....+++..+..++.||+.||.|||+++++|+||+|+||++ +.++.++|+|||++.............+++
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 156 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL---DSNGYVKLVDFGFAKKLKSGQKTWTFCGTP 156 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---cCCCCEEEeeCCcccccCcccccccccCCc
Confidence 99999888889999999999999999999999999999999999999 677899999999998765543334467889
Q ss_pred cccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccC
Q 008475 267 YYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET--QQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQ 343 (564)
Q Consensus 267 ~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~d 343 (564)
.|+|||.+.+ .++.++|+||+|+++|+|++|..||.... ..+....+..+......+ ..+++++.++|.+||..+
T Consensus 157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~ 234 (262)
T cd05572 157 EYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFP--NYIDKAAKDLIKQLLRRN 234 (262)
T ss_pred CccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCC--cccCHHHHHHHHHHccCC
Confidence 9999999874 58999999999999999999999998776 666666666433322222 235889999999999999
Q ss_pred CCCCCC-----HHHHhcCCCcCCCC
Q 008475 344 PSERLT-----AHEVLCHPWICENG 363 (564)
Q Consensus 344 p~~R~s-----~~~vl~hp~~~~~~ 363 (564)
|++||+ +.|+++||||+...
T Consensus 235 p~~R~~~~~~~~~~l~~~~~~~~~~ 259 (262)
T cd05572 235 PEERLGNLKGGIKDIKKHKWFNGFD 259 (262)
T ss_pred hhhCcCCcccCHHHHhcChhhhCCC
Confidence 999999 99999999998753
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=342.46 Aligned_cols=253 Identities=26% Similarity=0.454 Sum_probs=211.1
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec------
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED------ 171 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~------ 171 (564)
...|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++++.+||||+++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 356888999999999999999999999999999986532 2335678899999999669999999999875
Q ss_pred CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
...+|+||||+++++|.+++... ..+++..+..++.|++.||.|||+++|+||||||+||++ +.++.++|+|||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili---~~~~~~~l~Dfg~ 157 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGV 157 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE---CCCCCEEEccCCC
Confidence 34689999999999999988763 358999999999999999999999999999999999999 6778899999999
Q ss_pred ccccCCC-CceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC
Q 008475 250 SVFFKPG-QIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES 322 (564)
Q Consensus 250 ~~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 322 (564)
+...... .......|++.|+|||++. ..++.++||||+||++|+|++|..||...........+.... ...
T Consensus 158 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~--~~~ 235 (272)
T cd06637 158 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP--APR 235 (272)
T ss_pred ceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCC--CCC
Confidence 8765432 2233467889999999985 247889999999999999999999997766554444433322 112
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 323 ~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.....++.++.+||.+||..||.+|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 236 LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 2234578999999999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=352.73 Aligned_cols=254 Identities=20% Similarity=0.263 Sum_probs=205.9
Q ss_pred eccccccc--CCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 103 LGRKLGQG--QFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 103 ~~~~lG~G--~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
++++||+| +||+||++.+..+|+.||+|++..... .....+.+.+|+.+++.+. ||||+++++++..+...|+|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEECCEEEEEEe
Confidence 46789999 789999999999999999999965433 3445567888999999996 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-C
Q 008475 181 LCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-Q 257 (564)
Q Consensus 181 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~ 257 (564)
|+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.++++|||.+...... .
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~---~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE---ecCCcEEEcccchhhccccccc
Confidence 99999999988653 458999999999999999999999999999999999999 66778999999865432211 0
Q ss_pred -------ceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC------
Q 008475 258 -------IFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE------ 321 (564)
Q Consensus 258 -------~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~------ 321 (564)
......++..|+|||++.+ .++.++|||||||++|+|++|..||..............+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 0112346778999999974 488999999999999999999999977655443333332221100
Q ss_pred ------------------------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 322 ------------------------------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 322 ------------------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.+....+++.+.+||.+||+.||++|||++++++||||+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 0011235678999999999999999999999999999975
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=337.06 Aligned_cols=251 Identities=26% Similarity=0.433 Sum_probs=219.5
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|.+.+.||+|++|.||+|.+..+++.|++|.+..... .......+.+|+++++.++ ||||+++++++......|+|||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLD-SSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcC-CCCeehheeeeccCCEEEEEEE
Confidence 7788999999999999999999999999999875443 3445677889999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 181 LCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 181 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
|+++++|.+++... ..+++..+..++.|++.||.|||+.||+|+||||+||++ +.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili---~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL---DAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---eCCCCEEEcccccceeccCccc
Confidence 99999999998764 568999999999999999999999999999999999999 667889999999988655432
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
......+++.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+.++...... ..++..+.++|
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i 233 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVS---QMYSQQLAQLI 233 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHHH
Confidence 2234568899999999874 5889999999999999999999999988877777777665543222 25789999999
Q ss_pred HHhcccCCCCCCCHHHHhcCCCc
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.+||+.+|++||++.++++|||+
T Consensus 234 ~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 234 DQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHccCCcccCcCHHHHhhCCCC
Confidence 99999999999999999999996
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=343.08 Aligned_cols=258 Identities=28% Similarity=0.446 Sum_probs=218.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|.+..++..+|+|.+... .....+.+.+|+++++.+. ||||+++++++......++|
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~~v 80 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCC-CCCeeeEEEEEeeCCEEEEE
Confidence 4578899999999999999999999999999998643 3445677889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|||+++++|...+.. ..++++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili---~~~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 81 IEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---ccCCCEEEccccccccccccc
Confidence 999999999887765 4578999999999999999999999999999999999999 67788999999998654322
Q ss_pred CceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 257 QIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.......+++.|+|||++. ..++.++|||||||++|+|++|.+||...+..+....+........ .....++.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 236 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL-AQPSRWSS 236 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC-CCccccCH
Confidence 2233456889999999984 2377899999999999999999999988777666655554432211 12235789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
++.+||.+||..||.+||++.++++||||.....
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 270 (282)
T cd06643 237 EFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN 270 (282)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence 9999999999999999999999999999987543
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=356.30 Aligned_cols=238 Identities=27% Similarity=0.406 Sum_probs=207.6
Q ss_pred cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
++-||.|+.|.||+|+. .++.||||+++.. -..+|+-|++|+ ||||+.+.|+|....++|||||||.
T Consensus 129 LeWlGSGaQGAVF~Grl--~netVAVKKV~el----------kETdIKHLRkLk-H~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--HNETVAVKKVREL----------KETDIKHLRKLK-HPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhccCcccceeeeec--cCceehhHHHhhh----------hhhhHHHHHhcc-CcceeeEeeeecCCceeEEeeeccc
Confidence 66799999999999994 5789999987522 135788899998 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceeccc
Q 008475 184 GGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV 263 (564)
Q Consensus 184 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~ 263 (564)
.|.|++.|+....++......|..+|+.|++|||.+.|||||||.-||||. .+..|||+|||-++..........++
T Consensus 196 ~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~~~~STkMSFa 272 (904)
T KOG4721|consen 196 QGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGTSKELSDKSTKMSFA 272 (904)
T ss_pred cccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccchHhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999994 45589999999999887666666799
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
||..|||||++.+ ..+.|+|||||||+|||||||..||...+...++--+-.....++ ....+++.++-||++||+-
T Consensus 273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lp--vPstcP~GfklL~Kqcw~s 350 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLP--VPSTCPDGFKLLLKQCWNS 350 (904)
T ss_pred hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCccccc--CcccCchHHHHHHHHHHhc
Confidence 9999999999985 589999999999999999999999987776555443333333332 3356899999999999999
Q ss_pred CCCCCCCHHHHhcCCCc
Q 008475 343 QPSERLTAHEVLCHPWI 359 (564)
Q Consensus 343 dp~~R~s~~~vl~hp~~ 359 (564)
.|..||++.++|.|-=+
T Consensus 351 KpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 351 KPRNRPSFRQILLHLDI 367 (904)
T ss_pred CCCCCccHHHHHHHHhh
Confidence 99999999999999443
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=344.91 Aligned_cols=253 Identities=27% Similarity=0.422 Sum_probs=207.9
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++.+.||+|++|.||+|.+..++..||+|.+..... .......+.+|+.+++.+. ||||+++++++.++..+|+|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQ-HPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcC-CCCEeeeEEEEeeCCeEEEEEe
Confidence 7889999999999999999999999999999865332 2233456788999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 181 LCAGGELFDRIIQR---GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 181 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|++ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---cCCCcEEECcccceeecCCCc
Confidence 996 6888877543 468999999999999999999999999999999999999 77889999999998755322
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc----------------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI---------------- 318 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~---------------- 318 (564)
.......+++.|+|||++.+ .++.++|||||||++|+|+||++||.+.........+.....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 22233467889999999864 478899999999999999999999987765433322211000
Q ss_pred ---------cCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 319 ---------DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 319 ---------~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.........+++++.+||.+||+.||.+|||+.+|+.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 00011123478999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=339.75 Aligned_cols=253 Identities=28% Similarity=0.466 Sum_probs=215.1
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC------HHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS------REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
+|.+.+.||+|+||.||+|.+..++..||+|.+....... ....+.+.+|+.+++.+. ||||+++++++....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ-HENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC
Confidence 3778899999999999999998899999999886543322 123457889999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
..++||||+++++|.+++...+.+++..+..++.|++.||.|||++|++||||+|+||++ ++++.++|+|||++...
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKKL 156 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCccc
Confidence 999999999999999999888889999999999999999999999999999999999999 77889999999998766
Q ss_pred CCCC-------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCC
Q 008475 254 KPGQ-------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW 325 (564)
Q Consensus 254 ~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 325 (564)
.... ......++..|+|||.+.+ .++.++|||||||++|+|++|..||...+....+..+..... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~ 233 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS---PEIP 233 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---CcCC
Confidence 4211 1123457889999999874 588899999999999999999999987766555544444221 1122
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
..++..+.++|.+||+.||.+||++.++++||||
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred cccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 3578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=336.82 Aligned_cols=252 Identities=26% Similarity=0.491 Sum_probs=215.7
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-CCeEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-SLCVHIV 178 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-~~~~~lv 178 (564)
.|++.+.||+|++|.||++.+..+++.||+|.+..... .....+.+.+|+.+++.++ |||++++++.+.. +..+|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLK-HPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCC-CCCeeeeeeeecCCCCEEEEE
Confidence 38899999999999999999999999999999965432 3445667889999999997 9999999998864 4568999
Q ss_pred EeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 179 MELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
|||+++++|.+++... ..+++..+..++.+++.||.+||+.||+||||||+||++ +..+.++|+|||++......
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~---~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL---TRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE---ecCCcEEEecccceEEeccc
Confidence 9999999999988763 458999999999999999999999999999999999999 67789999999998765432
Q ss_pred -CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 -QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
.......+++.|+|||++.+ .++.++|||||||++|+|++|+.||...+.......+..+.... ....+++.+.+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 232 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPP---MPKDYSPELGE 232 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC---CccccCHHHHH
Confidence 22334568899999999875 58899999999999999999999998877766666666654322 22457899999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+|.+||+.||.+||++.++++||||
T Consensus 233 li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 233 LIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHhccCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-43 Score=342.29 Aligned_cols=252 Identities=30% Similarity=0.477 Sum_probs=219.8
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||.|+||.||+|.+..++..||+|++.+.........+.+.+|+++++++. ||||+++++.+......++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC-CCChHHHHHhhcCCCeEEEEE
Confidence 3889999999999999999999899999999998765545556778999999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF 259 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~ 259 (564)
||++|++|.+++....++++..+..++.||+.||.|||++|++|+||+|+||++ ++++.++|+|||++.........
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~~~ 156 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDTLT 156 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---cCCCCEEEeecccccccCCCccc
Confidence 999999999999877789999999999999999999999999999999999999 77889999999998876555444
Q ss_pred ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ---QGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
....++..|+|||.+.+ .++.++|+||||+++|+|++|..||...+. ..+......... .....++..+.++
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 232 (258)
T cd05578 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADV----LYPATWSTEAIDA 232 (258)
T ss_pred cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccc----cCcccCcHHHHHH
Confidence 55678889999999874 479999999999999999999999987763 333333222222 2224578999999
Q ss_pred HHHhcccCCCCCCCH--HHHhcCCCc
Q 008475 336 IRKMLCSQPSERLTA--HEVLCHPWI 359 (564)
Q Consensus 336 i~~~l~~dp~~R~s~--~~vl~hp~~ 359 (564)
|.+||..||.+||++ +++++||||
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHccCChhHcCCccHHHHhcCCCC
Confidence 999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-45 Score=358.51 Aligned_cols=283 Identities=31% Similarity=0.504 Sum_probs=256.4
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.++++..||-|+||.|=+++.......+|+|++++..+....+.+.+..|-.||..++ .|.||++|..|.+..++|++|
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhhH
Confidence 3667788999999999999977666679999999999888888899999999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF 259 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~ 259 (564)
|-|-||.|-..|..++.|.+..++.++.-+++|++|||++|||+|||||+|+|+ +.+|.+||.|||+|+.+..+...
T Consensus 500 EaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g~KT 576 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSGRKT 576 (732)
T ss_pred HhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccCCce
Confidence 999999999999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred ecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 338 (564)
.++||||.|.|||++. +..+.++|.||||+++||||+|.+||.+.++..++..|++|.-.+..+ ..++..+.+||++
T Consensus 577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P--r~I~k~a~~Lik~ 654 (732)
T KOG0614|consen 577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP--RRITKTATDLIKK 654 (732)
T ss_pred eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc--cccchhHHHHHHH
Confidence 9999999999999887 468999999999999999999999999999999999999987665544 5689999999999
Q ss_pred hcccCCCCCCC-----HHHHhcCCCcCCCCC--CCCCCCCHHHHHHHHhhhhhhHHH
Q 008475 339 MLCSQPSERLT-----AHEVLCHPWICENGV--APDRSLDPAVLSRLKQFSAMNKLK 388 (564)
Q Consensus 339 ~l~~dp~~R~s-----~~~vl~hp~~~~~~~--~~~~~~~~~~~~~~k~~~~~n~~~ 388 (564)
++..+|.+|.. +.+|-+|.||.+..+ ...+.++++++..++..+++.++.
T Consensus 655 LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ptD~s~Fd 711 (732)
T KOG0614|consen 655 LCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPTDVSNFD 711 (732)
T ss_pred HHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcccchhcc
Confidence 99999999986 789999999998765 334567777777776666655543
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=344.15 Aligned_cols=253 Identities=32% Similarity=0.490 Sum_probs=211.9
Q ss_pred ccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCCc
Q 008475 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGE 186 (564)
Q Consensus 107 lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 186 (564)
||+|+||+||+|.+..+|+.||+|.+.+...........+..|+.+++.++ ||||+++++.+.....+|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 699999999999999999999999997654333334556678999999997 9999999999999999999999999999
Q ss_pred hHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecccC
Q 008475 187 LFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264 (564)
Q Consensus 187 L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~g 264 (564)
|.+++...+ .+++..+..++.|++.||.|||++|++||||+|+||++ +.++.++|+|||.+.............+
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAG 156 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCccccccC
Confidence 999987765 69999999999999999999999999999999999999 7778999999999876554444445667
Q ss_pred CCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccC
Q 008475 265 SPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQ 343 (564)
Q Consensus 265 t~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~d 343 (564)
+..|+|||.+.+ .++.++|||||||++|+|++|+.||...........+..............+++.+.++|.+||+.|
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 236 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKD 236 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCC
Confidence 889999999874 5889999999999999999999999765542222222222222223333457999999999999999
Q ss_pred CCCCC-----CHHHHhcCCCcCCCC
Q 008475 344 PSERL-----TAHEVLCHPWICENG 363 (564)
Q Consensus 344 p~~R~-----s~~~vl~hp~~~~~~ 363 (564)
|.+|| ++.+++.||||....
T Consensus 237 p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 237 PEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred hhHccCCCcccHHHHHhChhhhcCC
Confidence 99999 889999999998644
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=342.97 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=210.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|.+..++..||+|.+.... .......+.+|+.+++++. ||||+++++.+......++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCD-SPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEECCEEEEEE
Confidence 4788899999999999999999999999999986542 3445567889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF 259 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~ 259 (564)
||+++++|... ..+++..+..++.|++.||.|||+.||+|+||||+|||+ +.++.++|+|||++...... ..
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill---~~~~~~~l~dfg~~~~~~~~-~~ 150 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV---NTRGQVKLCDFGVSTQLVNS-IA 150 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE---CCCCCEEEeeCCcceecccc-cc
Confidence 99999988653 357899999999999999999999999999999999999 77889999999998765432 23
Q ss_pred ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 260 TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ-------QGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
....++..|+|||++.+ .++.++|||||||++|+|++|..||..... ......+..... +..+...++++
T Consensus 151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 228 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP--PVLPVGQFSEK 228 (279)
T ss_pred cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC--CCCCCCcCCHH
Confidence 44678999999999874 589999999999999999999999965321 122222222211 11123457889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+.++|.+||+.+|++||++++++.||||....
T Consensus 229 ~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 229 FVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred HHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 99999999999999999999999999997653
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=344.82 Aligned_cols=260 Identities=26% Similarity=0.369 Sum_probs=215.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|.+..++..||+|.+.... .......+.+|+.+++++. ||||+++++.+.....+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAV-SPYIVDFYGAFFIEGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcC-CCcHHhhhhheecCCeEEEE
Confidence 35889999999999999999999999999999886432 3445678889999999996 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 179 MELCAGGELFDRIIQR---GHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|||+++++|..++... ..+++..+..++.||+.||.|||+ .+|+||||||+||++ +.++.+||+|||++....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV---NGNGQVKLCDFGVSGNLV 154 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE---CCCCCEEEeecCCccccc
Confidence 9999999998887653 378999999999999999999997 599999999999999 667889999999987653
Q ss_pred CCCceecccCCCcccchhhhhh-------cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLK-------HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
.. ......+++.|+|||.+.+ .++.++|||||||++|+|++|..||...........+............+.
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd06622 155 AS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSG 233 (286)
T ss_pred CC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcc
Confidence 32 2334567889999999853 257899999999999999999999977655444433322111111222345
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
+++++.+||.+||..+|++||++.+++.||||......
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 234 YSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 88999999999999999999999999999999875533
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=339.44 Aligned_cols=254 Identities=29% Similarity=0.423 Sum_probs=216.9
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||.|+||+||+|....++..+|+|++..... ....+.+.+|+.+++.+. |+||+++++.+......++||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--QTSVDELRKEVQAMSQCN-HPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc--chHHHHHHHHHHHHHhcC-CCCEEEEEEEEeeCCEEEEEE
Confidence 58999999999999999999988999999999865442 225678899999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 180 ELCAGGELFDRIIQR---GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 180 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
|++++++|.+++... ..+++..+..++.||+.||.|||+.||+||||+|+||++ ++++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~---~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccchHHHhccC
Confidence 999999999998764 458999999999999999999999999999999999999 66788999999998765443
Q ss_pred Cce-----ecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC--CCCC
Q 008475 257 QIF-----TDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD--PWPL 327 (564)
Q Consensus 257 ~~~-----~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~ 327 (564)
... ....++..|+|||++.. .++.++|+|||||++|+|++|+.||...+..+.+..+.......... .+..
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKK 235 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCcccccc
Confidence 221 33468889999999874 48899999999999999999999998877666665555543221111 1235
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+++.+.++|.+||..||++||++.++++||||
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 236 YSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 78999999999999999999999999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=342.84 Aligned_cols=257 Identities=31% Similarity=0.465 Sum_probs=216.7
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
...+|++.+.||+|+||.||+|.+..++..||+|.+..... ...+.+.+|+.+++.+. ||||+++++.+......|
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~-h~~v~~~~~~~~~~~~~~ 93 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDELW 93 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCC-CCCEeeEEEEEEeCCEEE
Confidence 44579999999999999999999999999999999875432 23466889999999996 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++......
T Consensus 94 lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill---~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 94 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred EeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEECccccchhcccc
Confidence 99999999999998754 468999999999999999999999999999999999999 67789999999998765433
Q ss_pred C-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 Q-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
. ......+++.|+|||.+.+ .++.++|||||||++|+|++|+.||...........+..... ........++..+.+
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 248 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIFRD 248 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCC-CCCCCccccCHHHHH
Confidence 2 2234578899999999875 488999999999999999999999988776544433332221 111223457889999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
||.+||..+|++||++.++++||||...
T Consensus 249 li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 249 FLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred HHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 9999999999999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=356.45 Aligned_cols=252 Identities=35% Similarity=0.517 Sum_probs=219.6
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
+..+.+.|++...+|.|+|+.|-.|.+..+++..++|++.+... ...+|+.++....+||||+++.+.+.+..
T Consensus 317 ~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~ 389 (612)
T KOG0603|consen 317 TAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGK 389 (612)
T ss_pred cCCcchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCc
Confidence 34567889999999999999999999999999999999986522 23468888888888999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
+.|+|||++.|+.|.+.+...+.+. ..+..|+++|+.|+.|||++|+|||||||+|||+. ++.++++|+|||.++..
T Consensus 390 ~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 390 EIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSEL 466 (612)
T ss_pred eeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhC
Confidence 9999999999999999888776666 88889999999999999999999999999999994 46788999999999987
Q ss_pred CCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCccCCCCCCCCCCHH
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ-GIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
... ..+.+-|..|.|||++.. .|+.++||||||++||+||+|+.||...... ++...|..+.+. ..+|++
T Consensus 467 ~~~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s------~~vS~~ 538 (612)
T KOG0603|consen 467 ERS--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS------ECVSDE 538 (612)
T ss_pred chh--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc------cccCHH
Confidence 654 445577899999999985 5999999999999999999999999876655 666666555433 469999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+++||++||+.||.+||++.+++.||||....
T Consensus 539 AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~ 570 (612)
T KOG0603|consen 539 AKDLLQQLLQVDPALRLGADEIGAHPWFLSHP 570 (612)
T ss_pred HHHHHHHhccCChhhCcChhhhccCcchhcCC
Confidence 99999999999999999999999999994433
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-43 Score=347.50 Aligned_cols=254 Identities=26% Similarity=0.462 Sum_probs=207.3
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|+||.||+|.+..+|..||+|.+..... .......+.+|+.+++++. ||||+++++++.+...+++|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcC-CCCeeeHHHHhccCCceEEEE
Confidence 48889999999999999999999999999999865432 2223356778999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-C
Q 008475 180 ELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-Q 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~ 257 (564)
||++ ++|.+.+.. .+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...... .
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 79 EYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred ecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---cCCCcEEECccchhhccCCCCC
Confidence 9996 578887765 5679999999999999999999999999999999999999 67789999999998765432 2
Q ss_pred ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHcCCc--------------c-
Q 008475 258 IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFW-AETQQGIFDAVLKGHI--------------D- 319 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~-~~~~~~~~~~i~~~~~--------------~- 319 (564)
......+++.|+|||++.+ .++.++|||||||++|+|++|..||. +.+..+.++.+.+... .
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 2334567889999999875 37899999999999999999988864 4444444443322100 0
Q ss_pred --CC--------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 320 --FE--------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 320 --~~--------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
++ ....+.+++++.+||.+||..||.+|||+.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 00 01123478899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-42 Score=342.76 Aligned_cols=259 Identities=28% Similarity=0.443 Sum_probs=218.9
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|++.+.||.|+||.||+|++..++..||+|.+... .....+.+.+|+.+++.+. ||||+++++.+..+..+|
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 85 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCN-HPYIVKLLGAFYWDGKLW 85 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCcEeeeEEEEEeCCeEE
Confidence 446799999999999999999999999999999998643 4556677889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+||||+++++|..++.+ ...+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||++.....
T Consensus 86 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL---TLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred EEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE---cCCCCEEEccCccceeccc
Confidence 99999999999887754 4568999999999999999999999999999999999999 6678899999998865432
Q ss_pred C-CceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 256 G-QIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 256 ~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
. .......+++.|+|||++. ..++.++|||||||++|+|++|..||...+.......+....... ......+
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 241 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT-LSQPSKW 241 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCcc-CCCCccc
Confidence 2 2234456888999999884 236789999999999999999999998877666555554433221 1122457
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+.++.++|.+||..+|++||++.++++||||....
T Consensus 242 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 242 SMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 88999999999999999999999999999997643
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-42 Score=344.22 Aligned_cols=261 Identities=31% Similarity=0.466 Sum_probs=217.8
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
....+|++.+.||+|+||.||+|.+..++..||+|.+..... ...+.+.+|+.+++.+. ||||+++++++......
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDEL 91 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCEE
Confidence 345679999999999999999999999999999999865432 23456789999999996 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|+||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.++|+|||++.....
T Consensus 92 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili---~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred EEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEECcCccceEccC
Confidence 999999999999998754 468999999999999999999999999999999999999 7778999999999876544
Q ss_pred CC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 GQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.. ......+++.|+|||.+.+ .++.++|||||||++|+|++|..||...+.......+.... .........++..+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 246 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TPELQNPERLSAVFR 246 (297)
T ss_pred CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCC-CCCCCCccccCHHHH
Confidence 32 2234568889999999875 58899999999999999999999998766543332222221 111112345788999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
+||.+||..+|++||++.++++||||......
T Consensus 247 ~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (297)
T cd06656 247 DFLNRCLEMDVDRRGSAKELLQHPFLKLAKPL 278 (297)
T ss_pred HHHHHHccCChhhCcCHHHHhcCchhcccccc
Confidence 99999999999999999999999999875443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=341.43 Aligned_cols=271 Identities=27% Similarity=0.441 Sum_probs=225.0
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
..|+..+.||.|+||.||+|.+..++..||+|++.... .......+.+|+.+++.+. ||||+++++++.++...|+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEEE
Confidence 45888999999999999999999999999999986543 3445678899999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
|||++|++|.+++.. +++++..+..++.|++.||.|||+.+++|+||+|+||++ +.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE---cCCCCEEEcccccceeccCCcc
Confidence 999999999998864 578999999999999999999999999999999999999 677889999999987654332
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
......++..|+|||++.+ .++.++|+|||||++|+|++|..||...........+..+.. ......++..+.++|
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li 233 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---PTLTGEFSKPFKEFI 233 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC---CCCchhhhHHHHHHH
Confidence 2233567889999999874 588999999999999999999999988777666555543322 122234678999999
Q ss_pred HHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhh
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQF 381 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~ 381 (564)
.+||..+|++||++.++++||||...... .+.-.+.+.+++++
T Consensus 234 ~~~l~~~p~~Rp~~~~il~~~~~~~~~~~--~~~~~~~~~~~~~~ 276 (277)
T cd06640 234 DACLNKDPSFRPTAKELLKHKFIVKNAKK--TSYLTELIDRFKRW 276 (277)
T ss_pred HHHcccCcccCcCHHHHHhChHhhhcchh--hhHHHHHHHHHHhc
Confidence 99999999999999999999999775433 33334445555443
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-43 Score=368.74 Aligned_cols=247 Identities=33% Similarity=0.492 Sum_probs=210.9
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEE-Eec------
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGA-YED------ 171 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~-~~~------ 171 (564)
-+++|.+.|.+|||+.||+|.+...|..||+|++-.. +....+.+.+||++|+.|++|+|||.+++. ...
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 3488999999999999999999888899999987543 677888999999999999999999999993 321
Q ss_pred CCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQ--RGHYSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
...+.|.||||.||.|.+++.. ...|++.++++|+++++.||.+||... |||||||-||||| ..++..|||||
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl---s~~g~~KLCDF 190 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL---SADGNYKLCDF 190 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE---cCCCCEEeCcc
Confidence 2458899999999999999975 345999999999999999999999998 9999999999999 77889999999
Q ss_pred CCccccCCCCce----------ecccCCCcccchhhhh---h-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 008475 248 GLSVFFKPGQIF----------TDVVGSPYYVAPEVLL---K-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAV 313 (564)
Q Consensus 248 G~~~~~~~~~~~----------~~~~gt~~y~aPE~~~---~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i 313 (564)
|.+...-..... -....|+.|+|||.+. + ..+.|+|||+|||+||-|+....||...... +|
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----aI 266 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----AI 266 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----eE
Confidence 998754222110 1234689999999986 2 4899999999999999999999999776443 46
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCC
Q 008475 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHP 357 (564)
Q Consensus 314 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp 357 (564)
+.+.+.++.. +.++..+++||+.||+.||.+||++-|++++-
T Consensus 267 lng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 267 LNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred EeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 7787777654 67999999999999999999999999998753
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=328.64 Aligned_cols=258 Identities=25% Similarity=0.448 Sum_probs=231.6
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
..|.++++||.|+|++|.+++++.|.+.||+|++++..+...++++-+..|-.+..+..+||.+|-+..+|+++..+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 45999999999999999999999999999999999888888888888999999999999999999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc-CCCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~-~~~~ 257 (564)
.||++||+|.-++++.++++++.++.+...|+.||.|||+.|||+||||.+|||+ |..|++||+|+|..+.. .++.
T Consensus 330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~~gd 406 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGPGD 406 (593)
T ss_pred EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999 89999999999998764 5667
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWA--------ETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~--------~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
...+++|||.|.|||++++ .|+...|+|+|||+++||+.|+.||.- .+..-+++-|+...+..+. .+
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr----sl 482 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR----SL 482 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc----ee
Confidence 7788999999999999997 599999999999999999999999941 1223355666777766654 36
Q ss_pred CHHHHHHHHHhcccCCCCCC------CHHHHhcCCCcCCCC
Q 008475 329 SDSAKDLIRKMLCSQPSERL------TAHEVLCHPWICENG 363 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~------s~~~vl~hp~~~~~~ 363 (564)
|-.+..+++..|++||.+|. .+.++..||||....
T Consensus 483 svkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id 523 (593)
T KOG0695|consen 483 SVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID 523 (593)
T ss_pred ehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence 77788899999999999997 468999999998543
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-42 Score=334.22 Aligned_cols=252 Identities=30% Similarity=0.471 Sum_probs=221.5
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||.|+||.||.+++..++..+++|.+..... .......+.+|+.+++++. |+||+++++++.+....+++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQ-HPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCC-CCCeeEEEeEEecCCeEEEEE
Confidence 48899999999999999999999999999999865443 3455667889999999996 999999999999999999999
Q ss_pred eccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 180 ELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||+++++|.+++... ..+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~---~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFL---TKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEE---eCCCCEEECcCcceEEccccc
Confidence 999999999998765 458999999999999999999999999999999999999 667889999999987654332
Q ss_pred -ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 258 -IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
......+++.|+|||.+.+ .++.++||||||+++|+|++|..||......+....+..+...... ..++.++.++
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV---SVYSSELISL 232 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHH
Confidence 3345678999999999875 4888999999999999999999999988888888777776544322 4578999999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCc
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
|.+||..+|.+||++.++++|||+
T Consensus 233 i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 233 VHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHcccCcccCCCHHHHhhCcCC
Confidence 999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-42 Score=337.59 Aligned_cols=254 Identities=26% Similarity=0.422 Sum_probs=213.4
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccC---CCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL---ISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+|++.+.||.|+||.||+|.. .++..+|+|.+..... ........+.+|+++++.++ |+||+++++++.+...++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC-CCCEeeEeeEeecCCeEE
Confidence 378899999999999999986 5788999998864322 12334567889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP- 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~- 255 (564)
+||||+++++|.+++....++++..+..++.|++.||.|||+.+|+|+||+|+||++ +.++.++|+|||++.....
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML---MPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE---CCCCeEEeccchhhHhhhhc
Confidence 999999999999999887889999999999999999999999999999999999999 7788999999999875421
Q ss_pred ------CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 256 ------GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 256 ------~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
........++..|+|||++.+ .++.++|||||||++|+|++|..||...+.......+.......+ .....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 234 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP-RLPDSF 234 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC-CCCCCC
Confidence 112234568899999999875 488999999999999999999999987665544444433322111 122457
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+.++.++|.+||..+|.+||++.++++||||
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 8999999999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-43 Score=301.00 Aligned_cols=257 Identities=27% Similarity=0.476 Sum_probs=217.1
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|...++||+|.||+||+|++..+++.||+|.++-... ++-.-....+||-+|+.|+ |.|||+++++...+..+-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelk-hknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEeH
Confidence 36678899999999999999999999999999975442 2223456788999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-C
Q 008475 180 ELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-Q 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~ 257 (564)
||| ..+|..+... ++.+..+.++.++.|++.||.+||++++.||||||.|+|+ +.+|.+||.|||+++.+.-. .
T Consensus 81 e~c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 81 EFC-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred HHh-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCceE
Confidence 999 5577777654 6779999999999999999999999999999999999999 78899999999999876543 3
Q ss_pred ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCC--------
Q 008475 258 IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWP-------- 326 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-------- 326 (564)
.+...+.|.+|++|.++.+ -|+...|+||.|||+.|+.. |++.|.+.+..+.+..|.+-.-....+.|+
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdy 236 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDY 236 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCC
Confidence 4556678999999999986 39999999999999999987 888899998888887775422222222221
Q ss_pred -----------------CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 327 -----------------LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 327 -----------------~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.++..-+||++++|.-+|..|++++++|+||||...
T Consensus 237 k~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 237 KPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred cccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 234456899999999999999999999999999864
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=340.95 Aligned_cols=253 Identities=28% Similarity=0.403 Sum_probs=203.6
Q ss_pred cccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhh--cCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL--AGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 106 ~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
.||+|+||.||+|.+..+++.||+|.+.+.............+|..+++.+ .+||||+.+++.+...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999999765433222223344455444433 249999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceeccc
Q 008475 184 GGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV 263 (564)
Q Consensus 184 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~ 263 (564)
+++|.+++...+.+++..+..++.|++.||.|||+++|+||||||+|||+ +.++.++|+|||++....... .....
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~-~~~~~ 156 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK-PHASV 156 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccC-ccCcC
Confidence 99999999888889999999999999999999999999999999999999 777899999999987554322 23457
Q ss_pred CCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 008475 264 GSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341 (564)
Q Consensus 264 gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~ 341 (564)
|++.|+|||.+.+ .++.++||||+||++|+|++|..||........ ..+..............+++++.++|.+||.
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhhcCCcCCccccCHHHHHHHHHHhc
Confidence 8999999999863 478999999999999999999999975432111 1111111222222334588999999999999
Q ss_pred cCCCCCC-----CHHHHhcCCCcCCCC
Q 008475 342 SQPSERL-----TAHEVLCHPWICENG 363 (564)
Q Consensus 342 ~dp~~R~-----s~~~vl~hp~~~~~~ 363 (564)
.||.+|| +++++++||||++..
T Consensus 236 ~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 236 RDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 9999999 699999999998744
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=344.08 Aligned_cols=261 Identities=28% Similarity=0.449 Sum_probs=216.1
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC--CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI--SREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
+|++.+.||+|+||.||+|.+..+++.||+|.+...... .......+..|+++++.++ |+||+++++++.+....++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEE
Confidence 378889999999999999999999999999999765432 1223456778999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 178 VMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||+ +++|.+++.... .+++..+..++.||+.||.|||++||+||||+|+||++ +.++.++|+|||++......
T Consensus 80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI---ASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE---cCCCCEEEccceeeeeccCC
Confidence 99999 899999997765 79999999999999999999999999999999999999 67789999999999866433
Q ss_pred -CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC------------
Q 008475 257 -QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE------------ 321 (564)
Q Consensus 257 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~------------ 321 (564)
.......+++.|+|||.+.+ .++.++|||||||++|+|++|.+||.+....+.+..+........
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD 235 (298)
T ss_pred CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccc
Confidence 22334456788999999864 478899999999999999999888887776555544432110000
Q ss_pred ------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 322 ------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 322 ------------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
...+..++..+.+||.+||.+||++|||+.+++.||||.+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~ 291 (298)
T cd07841 236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAP 291 (298)
T ss_pred cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCC
Confidence 00123457889999999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-42 Score=333.95 Aligned_cols=253 Identities=27% Similarity=0.423 Sum_probs=219.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|+||.||+|.+..++..+|+|.+..... .......+.+|+.+++.+. ||||+++++.+......++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLS-HPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCC-CCchhheeeeEecCCEEEEEE
Confidence 48889999999999999999999999999999976543 3445678899999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 180 ELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||+++++|.+++... ..+++..+..++.+++.||.|||++||+|+||+|+||++. ++++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccCCCceecCCCc
Confidence 999999999999764 3489999999999999999999999999999999999993 234568999999998765544
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
......++..|+|||.+.+ .++.++||||||+++|+|++|..||...+.......+..+.... ....++..+.++|
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li 233 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP---ISDRYSPDLRQLI 233 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC---CCCCcCHHHHHHH
Confidence 4445678899999999874 47889999999999999999999998887777666665543321 1234789999999
Q ss_pred HHhcccCCCCCCCHHHHhcCCCc
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.+||..+|++|||+.++++||||
T Consensus 234 ~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 234 LSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHccCChhhCCCHHHHhhCCCC
Confidence 99999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=355.85 Aligned_cols=254 Identities=25% Similarity=0.420 Sum_probs=225.3
Q ss_pred eecccccccCCeEEEEEEEccCCcEEEEEEeccccC-CCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC--eEEEE
Q 008475 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL-ISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL--CVHIV 178 (564)
Q Consensus 102 ~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~--~~~lv 178 (564)
+...+||+|+|-+||+|.|..+|.+||.-.++-..+ ..+...+++..|+.+|+.|. ||||++++++|.+.. ++.+|
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNKTINFI 121 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCceeeee
Confidence 345689999999999999999999999876654433 35666789999999999997 999999999998754 48899
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+|++..|+|..++++.++++...++.|++||+.||.|||++. |||||||.+||+|+ +..|.|||+|+|+|......
T Consensus 122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred eecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHHhhcc
Confidence 999999999999999999999999999999999999999986 99999999999995 56789999999999987654
Q ss_pred CceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWA-ETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
. ....+|||.|||||++...|+..+||||||+.+.||+|+..||.. .++.++++++..|..+-..... -.+++++|
T Consensus 200 ~-aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV--~dPevr~f 276 (632)
T KOG0584|consen 200 H-AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKV--KDPEVREF 276 (632)
T ss_pred c-cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhcc--CCHHHHHH
Confidence 3 445899999999999999999999999999999999999999964 6788999999998765443332 36899999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
|.+||.. .+.|||+.|+|+||||...
T Consensus 277 IekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 277 IEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHHhcC-chhccCHHHHhhChhhccc
Confidence 9999999 9999999999999999975
|
|
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-42 Score=335.23 Aligned_cols=254 Identities=31% Similarity=0.468 Sum_probs=216.8
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|++.+.||.|+||.||+|.+..++..+|+|++.... ....+.+.+|+.+++.+. ||||+++++.+.+...+|+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 77 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECR-HPNIVAYFGSYLRRDKLWI 77 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCC-CCChhceEEEEEeCCEEEE
Confidence 356999999999999999999999899999999997543 335678899999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 178 VMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+|||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||+|+||++ +.++.+||+|||++......
T Consensus 78 ~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred EEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE---CCCCCEEECccccchhhhhh
Confidence 99999999999988776 789999999999999999999999999999999999999 67788999999998765432
Q ss_pred C-ceecccCCCcccchhhhhh----cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC-CCCCCCCH
Q 008475 257 Q-IFTDVVGSPYYVAPEVLLK----HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES-DPWPLISD 330 (564)
Q Consensus 257 ~-~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~ 330 (564)
. ......++..|+|||.+.+ .++.++|||||||++|+|++|..||...........+......... .....++.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSP 234 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhH
Confidence 2 2334578889999999863 5788999999999999999999999887766655555444222111 11234678
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPW 358 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~ 358 (564)
++.+||.+||..+|..|||+.+++.|||
T Consensus 235 ~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 235 VFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 8999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-42 Score=335.17 Aligned_cols=254 Identities=30% Similarity=0.484 Sum_probs=210.4
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC--CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CCeE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI--SREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SLCV 175 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~ 175 (564)
.|++.+.||+|+||.||+|.+..++..||+|++...... .......+.+|+.+++.++ ||||+++++++.. ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCEE
Confidence 388899999999999999999999999999998654321 2334567889999999997 9999999999875 4678
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+++|||+++++|.+++...+.+++..+..++.|++.||.|||+++|+||||+|+||++ +.++.+||+|||++.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~---~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCCCcccccc
Confidence 9999999999999999887889999999999999999999999999999999999999 6778899999999875432
Q ss_pred C----CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 256 G----QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 256 ~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
. .......++..|+|||.+.+ .++.++||||+||++|+|++|+.||...........+...... ......+++
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTN--PQLPSHISE 236 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCC--CCCchhcCH
Confidence 1 11223557889999999875 5889999999999999999999999877655444433322111 111234678
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
.+.++| +||..+|++||++++|++||||.
T Consensus 237 ~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 237 HARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 899999 67778999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=340.28 Aligned_cols=252 Identities=31% Similarity=0.490 Sum_probs=208.0
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--CeEEEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--LCVHIV 178 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~~~lv 178 (564)
|++.+.||+|+||.||+|.+..++..||+|++.+... .... ....+|+.+++++.+||||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6778899999999999999999999999999865432 2222 23457899999997799999999999987 899999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||++ ++|.+.+... ..+++..+..++.||+.||.|||+.|++||||+|+||++ +. +.+||+|||++.......
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l---~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI---KD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---cC-CCeEEEecccccccccCC
Confidence 99996 5888877653 568999999999999999999999999999999999999 55 899999999998765544
Q ss_pred ceecccCCCcccchhhhh--hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC------------------
Q 008475 258 IFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH------------------ 317 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~------------------ 317 (564)
......++..|+|||.+. +.++.++|||||||++|||++|..||.+.+..+.+..+....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07831 154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN 233 (282)
T ss_pred CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence 445567889999999875 347889999999999999999999998877665544443211
Q ss_pred ccCCCC-------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 318 IDFESD-------PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 318 ~~~~~~-------~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
..++.. ..+.++.++.+||.+||.++|++||++.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 000000 013468999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-42 Score=341.02 Aligned_cols=257 Identities=32% Similarity=0.493 Sum_probs=218.4
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
..+|++.+.||.|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.+++.++ ||||+++++++.....+|+
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~l 93 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELK-NPNIVNFLDSFLVGDELFV 93 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcC-CCceeeeeeeEecCceEEE
Confidence 356999999999999999999999999999999986543 223467889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|+||+++++|..++.. ..+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.......
T Consensus 94 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili---~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 94 VMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred EEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccchhccccc
Confidence 9999999999987754 468999999999999999999999999999999999999 677899999999987654432
Q ss_pred c-eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 258 I-FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 258 ~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
. .....++..|+|||.+.+ .++.++|||||||++|+|++|..||...+.......+...... .......+++.+.+|
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 248 (296)
T cd06655 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSPIFRDF 248 (296)
T ss_pred ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc-ccCCcccCCHHHHHH
Confidence 2 234568889999999874 5889999999999999999999999887765555444433221 122234578999999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
|.+||..||.+||++.++++||||....
T Consensus 249 i~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 249 LNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred HHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 9999999999999999999999998644
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=344.63 Aligned_cols=262 Identities=27% Similarity=0.390 Sum_probs=214.0
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--CeE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--LCV 175 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~~ 175 (564)
.+.|++.+.||+|+||.||+|.+..+|+.||+|++...... ......+.+|+.++++++ |+||+++++++... ..+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER-DGIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCeE
Confidence 35599999999999999999999999999999998654321 222234567999999997 99999999998754 568
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++||||+. ++|.+++.. ...+++..+..++.||+.||.|||+.|++||||||+||++ +..+.+||+|||++....
T Consensus 84 ~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL---TDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccceeeecC
Confidence 99999995 578887765 3668999999999999999999999999999999999999 677899999999998765
Q ss_pred CC-CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc-------------
Q 008475 255 PG-QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI------------- 318 (564)
Q Consensus 255 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~------------- 318 (564)
.. .......+++.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+.....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcc
Confidence 33 22333456788999999864 478999999999999999999999998887777666544211
Q ss_pred ------cCCCCC-------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 319 ------DFESDP-------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 319 ------~~~~~~-------~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
...... ...+++++.+||.+||++||++|||+.+++.||||......
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLP 299 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCC
Confidence 011000 12358899999999999999999999999999999875543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-42 Score=340.61 Aligned_cols=255 Identities=30% Similarity=0.510 Sum_probs=214.2
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|+||.||+|.+..+|..||+|++..... .......+.+|+.+++++. ||||+++++++......++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEe
Confidence 48899999999999999999999999999999876442 2334567889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 180 ELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
||+ +++|.+++.. ...+++..++.++.||+.||.|||+.|++|+||||+||++ +.++.++|+|||++.......
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI---SADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEE---cCCCcEEEeeeeecccccCCCC
Confidence 999 9999998865 4568999999999999999999999999999999999999 667889999999988764432
Q ss_pred -ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc----------------
Q 008475 258 -IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI---------------- 318 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~---------------- 318 (564)
......++..|+|||.+.+ .++.++||||+||++|+|++|.+||.+......+..+.....
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 2345678999999998863 478999999999999999999988887776555544432110
Q ss_pred ---cCCC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 319 ---DFES-------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 319 ---~~~~-------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
.++. ...+.++..+.+||.+||..+|.+|||++++|+||||.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 0000 11234678999999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=332.99 Aligned_cols=252 Identities=25% Similarity=0.509 Sum_probs=218.7
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|+||.||++++..+++.||+|.+..... .......+.+|+.+++.+. ||||+++++++......++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMK-HPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCC-CCCeeeeEeeecCCCeEEEEE
Confidence 48899999999999999999999999999999875433 3344567889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 180 ELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||+.+++|.+.+.... .+++..+..++.|++.||.|||++|++|+||+|+||++ +.++.++|+|||++.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~---~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEEeeccceeecCcch
Confidence 9999999999887643 57899999999999999999999999999999999999 667789999999987654332
Q ss_pred -ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 258 -IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
......+++.|+|||++.+ .++.++|+|||||++|+|++|..||......+....+..+..... ...++.++.++
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 232 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPV---SSHYSYDLRNL 232 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCC---cccCCHHHHHH
Confidence 2223467889999999874 588899999999999999999999998888887777776654322 23578999999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCc
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
|.+||+.+|.+||++.+|++||||
T Consensus 233 i~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 233 VSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=341.35 Aligned_cols=256 Identities=28% Similarity=0.391 Sum_probs=207.9
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe-----
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC----- 174 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~----- 174 (564)
.|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.+..||||+++++++.....
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 58899999999999999999999999999998865322 222345678899999999768999999999887665
Q ss_pred EEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC-CCcEEEeeCC
Q 008475 175 VHIVMELCAGGELFDRIIQR-----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD-DFSLKAIDFG 248 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~-~~~~kl~DfG 248 (564)
.|+||||+++ +|.+++... ..+++..+..++.||+.||.|||++||+||||+|+||++ +. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~---~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLV---DKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---ecCCCeEEEeecc
Confidence 8999999975 788887643 357999999999999999999999999999999999999 44 7789999999
Q ss_pred CccccCCC-CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC-----
Q 008475 249 LSVFFKPG-QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF----- 320 (564)
Q Consensus 249 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~----- 320 (564)
++...... .......+++.|+|||++.+ .++.++||||||+++|+|++|..||.+.+....+..+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence 98754322 22233456889999998864 47899999999999999999999998877655444332211000
Q ss_pred -------------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 321 -------------------ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 321 -------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
.....+.+++++.+||.+||..||.+||++.+++.||||+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 0011235789999999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-42 Score=358.83 Aligned_cols=250 Identities=18% Similarity=0.313 Sum_probs=204.0
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
...|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+++|++|. ||||+++++++......++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~-HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLS-HPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEE
Confidence 3469999999999999999999999999999995421 23568999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 178 VMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
|||++ .++|.+++... ..+++..+..|+.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++.....
T Consensus 238 v~e~~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl---~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 238 VLPKY-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV---NGPEDICLGDFGAACFARGS 313 (461)
T ss_pred EEEcc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE---CCCCCEEEcccCCceecccc
Confidence 99999 56888888664 469999999999999999999999999999999999999 67788999999999765432
Q ss_pred C---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCCccC---C
Q 008475 257 Q---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET--------QQGIFDAVLKGHIDF---E 321 (564)
Q Consensus 257 ~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~--------~~~~~~~i~~~~~~~---~ 321 (564)
. ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ...+.+.+....... +
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 1 1234679999999999985 58999999999999999999887654322 223333333322110 0
Q ss_pred ------------------------CCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 322 ------------------------SDPW---PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 322 ------------------------~~~~---~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
...| ..++.++.+||.+||..||.+|||+.|+|+||||+.
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 0011 135668999999999999999999999999999964
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=353.98 Aligned_cols=251 Identities=24% Similarity=0.384 Sum_probs=204.8
Q ss_pred ccceeecccccccCCeEEEEEEEccCC-----cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATG-----IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
.++|++.+.||+|+||.||+|.+...+ ..||+|++.... .......+.+|+.+++.+.+||||+++++++...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 456999999999999999999865433 579999997543 3344667889999999995599999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc----------------------------------------------------------
Q 008475 173 LCVHIVMELCAGGELFDRIIQR---------------------------------------------------------- 194 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~---------------------------------------------------------- 194 (564)
..+++|||||++|+|.+++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 9999999999999999988542
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce---
Q 008475 195 ------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF--- 259 (564)
Q Consensus 195 ------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~--- 259 (564)
.++++..+..++.||+.||.|||++||+||||||+|||+ ++++.+||+|||++.........
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~---~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL---TDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE---eCCCeEEEeeceeeeeccCCcceeec
Confidence 136788899999999999999999999999999999999 67788999999998765433211
Q ss_pred ecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
....++..|+|||++. +.++.++|||||||++|+|++ |..||........+..+......... ...+++++.++|.
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~ 349 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSR--PDFAPPEIYSIMK 349 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccC--CCCCCHHHHHHHH
Confidence 1223456799999987 469999999999999999997 99999876654444344333322222 2346899999999
Q ss_pred HhcccCCCCCCCHHHHhc
Q 008475 338 KMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~ 355 (564)
+||+.||.+|||+.++++
T Consensus 350 ~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 350 MCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HHcCCChhhCcCHHHHHH
Confidence 999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-42 Score=333.49 Aligned_cols=251 Identities=27% Similarity=0.451 Sum_probs=213.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|.+..++..||+|.+.... ..+.+.+|+++++.+. ||||+++++.+.+...+|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCD-SPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCC-CCcEeeeeeeeecCCcEEEE
Confidence 46999999999999999999998889999999986432 2678899999999996 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
+||+++++|.+++.. ...+++..+..++.|++.||.|||+.+++||||+|+||++ +.++.++|+|||++.......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~---~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL---NEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---CCCCcEEEcccccchhcccCc
Confidence 999999999998865 4568999999999999999999999999999999999999 677889999999988765432
Q ss_pred -ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 258 -IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
......++..|+|||++.+ .++.++||||||+++|+|++|+.||...........+...... .......++.++.++
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 232 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPP-TLSDPEKWSPEFNDF 232 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCC-CCCchhhcCHHHHHH
Confidence 2334557889999999875 5889999999999999999999999877665544443322111 111123477899999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCc
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
|.+||..||++|||+.++|.||||
T Consensus 233 i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 233 VKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHhcChhhCcCHHHHhcCCCC
Confidence 999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-42 Score=336.24 Aligned_cols=248 Identities=24% Similarity=0.384 Sum_probs=201.1
Q ss_pred cceeecccc--cccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 99 DLYTLGRKL--GQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 99 ~~y~~~~~l--G~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.|.+.+.+ |+|+||.||++.+..++..+|+|.+....... .|+.....+.+||||+++++.+.....+|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 346666665 99999999999999999999999987543211 12333333346999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCC-cEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF-SLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~-~~kl~DfG~~~~~~~ 255 (564)
+||||+++++|.+++.....+++..+..++.||+.||.|||+.|++||||||+||++ +.++ .++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~~l~dfg~~~~~~~ 162 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY---DRAKDRIYLCDYGLCKIIGT 162 (267)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---eCCCCeEEEecCccceecCC
Confidence 999999999999999887789999999999999999999999999999999999999 4455 899999999876543
Q ss_pred CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGI-FDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
. ....++..|+|||++.+ .++.++||||+||++|+|++|..||........ ...+.... .......+.+++.+.
T Consensus 163 ~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 238 (267)
T PHA03390 163 P---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNAN 238 (267)
T ss_pred C---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHH
Confidence 2 23468899999999974 589999999999999999999999975543322 11111111 222233446899999
Q ss_pred HHHHHhcccCCCCCCC-HHHHhcCCCcCC
Q 008475 334 DLIRKMLCSQPSERLT-AHEVLCHPWICE 361 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s-~~~vl~hp~~~~ 361 (564)
+||.+||+.+|.+||+ ++++|+||||++
T Consensus 239 ~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 239 DFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred HHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 9999999999999996 699999999963
|
|
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-42 Score=338.69 Aligned_cols=252 Identities=26% Similarity=0.443 Sum_probs=209.6
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec------C
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED------S 172 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~------~ 172 (564)
..|++.+.||.|+||.||+|.+..+++.||+|++... ......+..|+.+++++.+||||+++++++.. .
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 91 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHD 91 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCC
Confidence 4588999999999999999999999999999998643 23445688899999999779999999999853 4
Q ss_pred CeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 173 LCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
..+|++|||+++++|.+++... ..+++..+..++.||+.||.|||+.||+||||+|+||++ +.++.++|+|||++
T Consensus 92 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili---~~~~~~~l~dfg~~ 168 (282)
T cd06636 92 DQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDFGVS 168 (282)
T ss_pred CEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCcch
Confidence 6789999999999999988653 358899999999999999999999999999999999999 67788999999998
Q ss_pred cccCCC-CceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC
Q 008475 251 VFFKPG-QIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD 323 (564)
Q Consensus 251 ~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 323 (564)
...... .......|++.|+|||.+. ..++.++|||||||++|+|++|..||....+......+..... ...
T Consensus 169 ~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~ 246 (282)
T cd06636 169 AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP--PKL 246 (282)
T ss_pred hhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC--CCC
Confidence 754321 2223466889999999885 2478899999999999999999999987665544443333221 111
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 324 ~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
....++.++.+||.+||..||.+||++.++|+||||
T Consensus 247 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 247 KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred cccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 223578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=335.50 Aligned_cols=256 Identities=28% Similarity=0.440 Sum_probs=213.3
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC-------CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI-------SREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
+|.+.+.||.|+||.||+|.+..+++.||+|.+...... .....+.+..|+.+++.+. ||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD-HLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC-CCCcceEEEEeccC
Confidence 378899999999999999999889999999988542211 1123456888999999997 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 173 LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
...++||||+++++|.+++...+.+++..+..++.||+.||.|||+++++||||+|+||++ +.++.++|+|||++..
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~---~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGISKK 157 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE---cCCCeEEEeecccccc
Confidence 9999999999999999999888889999999999999999999999999999999999999 6788999999999876
Q ss_pred cCCC---CceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CccCCCCC
Q 008475 253 FKPG---QIFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG--HIDFESDP 324 (564)
Q Consensus 253 ~~~~---~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~--~~~~~~~~ 324 (564)
.... .......++..|+|||.+.. .++.++|+||||+++|+|++|..||...........+... ...++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDV 237 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccc
Confidence 4321 11234567889999999873 3788999999999999999999999766554433333222 12222333
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
...++.++.++|.+||..+|.+||++.++|+||||
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 238 SMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred cccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 34678999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=342.28 Aligned_cols=255 Identities=25% Similarity=0.438 Sum_probs=212.3
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+++++.+. ||||+++++++..+...|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-DKMVKKIAMREIRMLKQLR-HENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-cchhhHHHHHHHHHHHhcC-CcchhhHHHhcccCCeEEEEE
Confidence 58899999999999999999988999999999865433 2234556788999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-Cc
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-QI 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~~ 258 (564)
||+++++|..+......+++..+..++.||+.||.|||+.||+||||+|+||++ ++++.++|+|||++...... ..
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEV 156 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCccc
Confidence 999998888877666679999999999999999999999999999999999999 77889999999998765432 23
Q ss_pred eecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc------------------
Q 008475 259 FTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI------------------ 318 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~------------------ 318 (564)
.....++..|+|||++.+ .++.++|||||||++|+|++|.+||......+....+.....
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07846 157 YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAG 236 (286)
T ss_pred cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhc
Confidence 344567889999999874 478899999999999999999999977665443333221000
Q ss_pred -cCCC--------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 319 -DFES--------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 319 -~~~~--------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
..+. ..++.++..+.+|+.+||..+|++||++.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 237 MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred cccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0000 0124578899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-42 Score=338.79 Aligned_cols=256 Identities=26% Similarity=0.410 Sum_probs=209.5
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe-----
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE----- 170 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~----- 170 (564)
...++|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+..|+.+++.+.+||||+++++++.
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 35567999999999999999999999999999999875432 123467789999999966999999999873
Q ss_pred cCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEee
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAID 246 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~D 246 (564)
.+..+++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+|+||||||+||++ +.++.+||+|
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~kl~d 167 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILL---TTEGGVKLVD 167 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEE---CCCCCEEEcc
Confidence 45679999999999999987753 3468899999999999999999999999999999999999 6677899999
Q ss_pred CCCccccCCCC-ceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc
Q 008475 247 FGLSVFFKPGQ-IFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID 319 (564)
Q Consensus 247 fG~~~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~ 319 (564)
||++....... ......|++.|+|||++. ..++.++||||+||++|+|++|+.||........+..+......
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~ 247 (286)
T cd06638 168 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPP 247 (286)
T ss_pred CCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCC
Confidence 99987654322 223456899999999885 23788999999999999999999999877654444333322111
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 320 FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 320 ~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.......++..+.+||.+||+.||++|||+.+|++||||
T Consensus 248 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 248 -TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred -cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 111123467899999999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=338.02 Aligned_cols=256 Identities=24% Similarity=0.376 Sum_probs=212.4
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS---- 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---- 172 (564)
..+.|.+.+.||+|+||.||+|.+..+++.+|+|++.... .....+..|+.+++++.+||||+++++++...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~ 95 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLV 95 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccC
Confidence 3566999999999999999999999999999999986432 22356778999999996699999999998643
Q ss_pred -CeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 173 -LCVHIVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 173 -~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
...++||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+|+||||||+||++ +.++.+||+||
T Consensus 96 ~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili---~~~~~~kl~df 172 (291)
T cd06639 96 GGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL---TTEGGVKLVDF 172 (291)
T ss_pred CCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEeec
Confidence 468999999999999988753 3568999999999999999999999999999999999999 67788999999
Q ss_pred CCccccCCCC-ceecccCCCcccchhhhhh------cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC
Q 008475 248 GLSVFFKPGQ-IFTDVVGSPYYVAPEVLLK------HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF 320 (564)
Q Consensus 248 G~~~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~ 320 (564)
|++....... ......++..|+|||++.. .++.++|||||||++|+|++|++||........+..+.++....
T Consensus 173 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 252 (291)
T cd06639 173 GVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPT 252 (291)
T ss_pred ccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCC
Confidence 9987654322 2234568889999999852 26889999999999999999999998877666555555443221
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 321 ~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
.. ....++..+.+||.+||+.+|++||++.++++||||+
T Consensus 253 ~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 253 LL-HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred CC-cccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 11 1234678899999999999999999999999999984
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=353.45 Aligned_cols=251 Identities=22% Similarity=0.357 Sum_probs=204.3
Q ss_pred ccceeecccccccCCeEEEEEEE-----ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTE-----IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
.++|++.+.||+|+||.||+|++ ..++..||+|++.... .....+.+.+|+.+++.+.+||||+++++++...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 45699999999999999999974 3456789999986433 2334567889999999995599999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcC---------------------------------------------------------
Q 008475 173 LCVHIVMELCAGGELFDRIIQRG--------------------------------------------------------- 195 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~~--------------------------------------------------------- 195 (564)
...++|||||++|+|.+++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 99999999999999999886532
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 196 ------------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 196 ------------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEE---ECCCcEEEecCccceeccCcc
Confidence 36788899999999999999999999999999999999 667789999999997654322
Q ss_pred ce---ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH-HHHHHHHcCCccCCCCCCCCCCHH
Q 008475 258 IF---TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQ-GIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 258 ~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.. ....++..|+|||++.+ .++.++|||||||++|||++ |..||...... .....+..+.. .. .....+.+
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~ 345 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYR-ML--SPECAPSE 345 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCcc-CC--CCCCCCHH
Confidence 11 12334567999999874 58999999999999999998 89999776543 34444443322 11 12346889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+.+||.+||+.||++|||+.+|++.
T Consensus 346 l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 346 MYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=334.44 Aligned_cols=248 Identities=20% Similarity=0.305 Sum_probs=209.3
Q ss_pred cceeecccccccCCeEEEEEEEc---cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
..|++.+.||+|+||.||+|.+. ..+..||+|.+.... .......+.+|+.+++.++ ||||+++++++......
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFD-HSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEecCCCc
Confidence 35899999999999999999865 345689999987542 3444567889999999996 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++||||+++|+|.+++... ..+++..++.++.||+.||+|||++|++||||||+|||+ +.++.+|++|||.+....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili---~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV---NSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE---cCCCcEEECCCccccccc
Confidence 9999999999999988764 578999999999999999999999999999999999999 677899999999876543
Q ss_pred CCCcee--cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQIFT--DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~~~~--~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
...... ...++..|+|||.+. +.++.++|||||||++|||++ |..||......+..+.+..+... +....++.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 235 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL---PAPRNCPN 235 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC---CCCCCCCH
Confidence 222111 233457899999887 468999999999999999775 99999998888888877665322 22346889
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+.+++.+||+.+|.+||+++++++
T Consensus 236 ~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 236 LLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHHHHHHHcCCCchhCCCHHHHHH
Confidence 9999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-42 Score=335.92 Aligned_cols=256 Identities=27% Similarity=0.454 Sum_probs=211.6
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC---HHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS---REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
|+..+.||+|+||.||+|.+..+++.||+|++....... ....+.+.+|+.+++.++ ||||+++++++.+...+++
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCeEEE
Confidence 778899999999999999999999999999986543211 224578899999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCC-CcEEEeeCCCccccCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD-FSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~-~~~kl~DfG~~~~~~~~ 256 (564)
||||+++++|.+++...+++++..+..++.||+.||.|||++|++|+||+|+||++ +.+ ..+||+|||.+......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~---~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLI---DSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEEcccccccccccc
Confidence 99999999999999888889999999999999999999999999999999999999 444 36999999998765432
Q ss_pred C-----ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-ccCCCCCCCCCC
Q 008475 257 Q-----IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH-IDFESDPWPLIS 329 (564)
Q Consensus 257 ~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~s 329 (564)
. ......++..|+|||.+.+ .++.++||||+||++|+|++|..||...........+.+.. ..........++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLS 237 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhC
Confidence 1 1123467889999999874 58899999999999999999999997554332222222110 111122224578
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
+++.+++.+||..+|++||++.++++||||.
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 9999999999999999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=332.45 Aligned_cols=254 Identities=30% Similarity=0.494 Sum_probs=211.3
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccC--CCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CCeE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL--ISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SLCV 175 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~ 175 (564)
.|++.+.||+|+||.||+|.+..++..||+|.+..... ......+.+.+|+.+++.+. ||||+++++++.+ ...+
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL-HERIVQYYGCLRDPMERTL 81 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC-CCCeeeEEeEeccCCCceE
Confidence 48899999999999999999999999999998854321 12345678889999999997 9999999999876 3578
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
++||||+++++|.+++...+.+++..+..++.|++.||.|||+++|+|+||||+||++ +.++.++|+|||++.....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR---DSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe---cCCCCEEECcCcccccccc
Confidence 8999999999999999887789999999999999999999999999999999999999 6778999999999875432
Q ss_pred C----CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 256 G----QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 256 ~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
. .......++..|+|||++.+ .++.++|||||||++|+|++|+.||...........+...... ......++.
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN--PVLPPHVSD 236 (265)
T ss_pred ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC--CCCchhhCH
Confidence 1 11233568889999999874 5889999999999999999999999876655444444322211 112235678
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
.+.++|.+|| .+|++||+++++++|||+.
T Consensus 237 ~~~~~i~~~l-~~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 237 HCRDFLKRIF-VEAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHHHHHHHh-cChhhCCCHHHHhcCcccC
Confidence 8999999999 4999999999999999983
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=332.08 Aligned_cols=254 Identities=29% Similarity=0.457 Sum_probs=215.4
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|+||.||+|.+..++..||+|.+..... .....+.+..|+.+++.++ |+||+++++.+.....+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLK-HPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCC-CCChhheeeeEecCCEEEEEE
Confidence 48889999999999999999988999999999876543 2456788999999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc-
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI- 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~- 258 (564)
||+++++|.+++...+.+++..+..++.+++.||.|||+.||+|+||+|+||++ +.++.+||+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL---DHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEcccccccccCCCCCc
Confidence 999999999999887779999999999999999999999999999999999999 6778999999999887643322
Q ss_pred ----eecccCCCcccchhhhhh-c---CCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCccCCCCCCCCCC
Q 008475 259 ----FTDVVGSPYYVAPEVLLK-H---YGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 259 ----~~~~~gt~~y~aPE~~~~-~---~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
.....++..|+|||++.+ . ++.++||||||+++|+|++|..||..... ......+.. ......+....++
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 234 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPPIPDSLQLS 234 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCCCCcccccC
Confidence 123567889999999873 3 78899999999999999999999976533 333333332 2222223334568
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+.+.++|.+||+.+|.+||++.+++.|||+
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 999999999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-42 Score=336.09 Aligned_cols=254 Identities=26% Similarity=0.370 Sum_probs=214.9
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||.|+||.||+|.+..+++.||+|.+.... .......+.+|+++++.+. ||||+++++.+.....+++++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEEE
Confidence 4788899999999999999999999999999987643 2345667889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 180 ELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||+++++|.+++... ..+++..+..++.|++.||.|||+ .|++|+||||+||++ +.++.++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~---~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV---NSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEE---CCCCCEEEeecccchhhHHHH
Confidence 999999999998775 789999999999999999999999 999999999999999 667889999999987654322
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE-----TQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
. ....++..|+|||.+.+ .++.++||||||+++|+|++|..||... ...+....+....... .+...++++
T Consensus 156 ~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 232 (265)
T cd06605 156 A-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPR--LPSGKFSPD 232 (265)
T ss_pred h-hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCC--CChhhcCHH
Confidence 2 12678889999999875 5889999999999999999999999654 2233444443332111 111227899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+.++|.+||..||++|||+.+++.||||+.+
T Consensus 233 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 233 FQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 9999999999999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=330.81 Aligned_cols=254 Identities=31% Similarity=0.458 Sum_probs=217.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccC--CCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL--ISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
+|+..+.||+|+||.||+|.+..++..|++|.+..... ......+.+.+|+.+++.+. ||||+++++++.....+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC-CCCchheeeeEecCCeEEE
Confidence 37778899999999999999988999999999865432 22445678899999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
+|||+++++|.+++...+.+++..+..++.||+.||.|||+.||+|+||+|+||++ +.++.+||+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~---~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV---DTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccceeccccc
Confidence 99999999999999888789999999999999999999999999999999999999 677899999999988765444
Q ss_pred ceecccCCCcccchhhhhh-c-CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-H-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~-~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
......++..|+|||.+.. . ++.++|+|||||++|+|++|..||...........+...... ......+++.+.++
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l 234 (258)
T cd06632 157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL--PPIPDHLSDEAKDF 234 (258)
T ss_pred cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccC--CCcCCCcCHHHHHH
Confidence 3455678899999998864 4 789999999999999999999999776655544444331111 11224578999999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCc
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+.+||..+|.+||++.+++.|||+
T Consensus 235 i~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 235 ILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-42 Score=349.47 Aligned_cols=259 Identities=27% Similarity=0.443 Sum_probs=211.3
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC---
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--- 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--- 172 (564)
.+.++|++.+.||+|+||.||+|.+..++..||+|++.+.. ........+.+|+.+++.+. ||||++++++|...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 90 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVN-HKNIIGLLNVFTPQKSL 90 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcC-CCCCcceeeeeccCCCc
Confidence 35677999999999999999999999999999999986432 23445567788999999997 99999999998643
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
...|+||||+. ++|.+.+... +++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 91 ~~~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~Dfg~ 164 (353)
T cd07850 91 EEFQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 164 (353)
T ss_pred cccCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCcc
Confidence 35799999995 5888877543 8999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH----------- 317 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~----------- 317 (564)
+.............+++.|+|||.+.+ .++.++|||||||++|+|++|+.||...+.......+....
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 165 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred ceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 987654444445678899999999875 58999999999999999999999998776544433332100
Q ss_pred -----------ccC--------------CC---CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 318 -----------IDF--------------ES---DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 318 -----------~~~--------------~~---~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
... +. ......++.+.+||.+||+.||.+|||+.++|.||||+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~ 317 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW 317 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence 000 00 0011346678999999999999999999999999999743
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=335.25 Aligned_cols=254 Identities=27% Similarity=0.439 Sum_probs=212.6
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC----
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL---- 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---- 173 (564)
.++|++.+.||+|+||.||+|.+..+++.+++|++.... ...+.+.+|+.+++++.+||||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 467999999999999999999999899999999986542 234678899999999966999999999997644
Q ss_pred --eEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 174 --CVHIVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 174 --~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
.+++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||++ +.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~---~~~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL---TKNAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---ccCCeEEECCC
Confidence 48999999999999988765 3578999999999999999999999999999999999999 67788999999
Q ss_pred CCccccCCC-CceecccCCCcccchhhhhh------cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC
Q 008475 248 GLSVFFKPG-QIFTDVVGSPYYVAPEVLLK------HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF 320 (564)
Q Consensus 248 G~~~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~ 320 (564)
|++...... .......++..|+|||++.. .++.++|||||||++|+|++|..||...........+..+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 237 (275)
T cd06608 158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPT 237 (275)
T ss_pred ccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCC
Confidence 998765432 22234568899999998852 36789999999999999999999998766655555555543221
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 321 ~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
. .....++.++.+||.+||..||++|||+.++++|||+
T Consensus 238 ~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 238 L-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred C-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 1 1112367899999999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-42 Score=345.07 Aligned_cols=249 Identities=25% Similarity=0.420 Sum_probs=192.2
Q ss_pred cccccccCCeEEEEEEEcc--CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe--cCCeEEEEE
Q 008475 104 GRKLGQGQFGTTYLCTEIA--TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE--DSLCVHIVM 179 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~--~~~~~~lv~ 179 (564)
+.+||+|+||.||+|++.. ++..||+|.+.... ....+.+|+.+++.++ ||||+++++++. .+..+++||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELK-HPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCC-CCCeeeEEEEEeccCCCeEEEEE
Confidence 4679999999999999654 56789999886432 1235678999999997 999999999885 456789999
Q ss_pred eccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC-CCCCcEEEeeCCC
Q 008475 180 ELCAGGELFDRIIQR---------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK-DDDFSLKAIDFGL 249 (564)
Q Consensus 180 e~~~~~~L~~~l~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~-~~~~~~kl~DfG~ 249 (564)
||+. ++|.+.+... ..+++..+..++.||+.||.|||+.||+||||||+|||+... +..+.+||+|||+
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 80 DYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 9995 5777776421 247899999999999999999999999999999999999543 3567899999999
Q ss_pred ccccCCCC----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHH
Q 008475 250 SVFFKPGQ----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQ---------GIFDAVL 314 (564)
Q Consensus 250 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~---------~~~~~i~ 314 (564)
+....... ......+|+.|+|||++.+ .++.++|||||||++|||+||.+||...... ..+..+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 98654322 2234578999999999874 4889999999999999999999999653321 1111111
Q ss_pred cC--------------CccC--------------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 315 KG--------------HIDF--------------------ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 315 ~~--------------~~~~--------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.. ...+ ........+..+.+||.+||..||.+|||+.|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 0000 000011235678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-42 Score=341.22 Aligned_cols=263 Identities=28% Similarity=0.481 Sum_probs=219.8
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..+.+.|.....||+|+||.||++.+..++..||||.+... .....+.+.+|+.+++.+. ||||+++++.+.....
T Consensus 18 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~ 93 (292)
T cd06658 18 GDPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYH-HENVVDMYNSYLVGDE 93 (292)
T ss_pred CchHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCC-CCcHHHHHHheecCCe
Confidence 34455677778899999999999999999999999998643 2344567889999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
.|+||||+++++|.+++. .+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.++|+|||++....
T Consensus 94 ~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kL~dfg~~~~~~ 169 (292)
T cd06658 94 LWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQVS 169 (292)
T ss_pred EEEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEccCcchhhcc
Confidence 999999999999988774 4568999999999999999999999999999999999999 677899999999987543
Q ss_pred CC-CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 255 PG-QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 255 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.. .......++..|+|||.+.+ .++.++||||||+++|||++|..||........+..+..... ........++..+
T Consensus 170 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 248 (292)
T cd06658 170 KEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLP-PRVKDSHKVSSVL 248 (292)
T ss_pred cccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CccccccccCHHH
Confidence 22 12234568899999999875 588999999999999999999999988877666655543321 1112223578899
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAP 366 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~ 366 (564)
.++|.+||..||.+|||+.++++||||......+
T Consensus 249 ~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 249 RGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred HHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 9999999999999999999999999998755443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=331.26 Aligned_cols=252 Identities=30% Similarity=0.487 Sum_probs=218.5
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CCeEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SLCVHI 177 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~~l 177 (564)
+|++.+.||.|+||.||+|.+..++..||+|++..... .....+.+..|+++++.++ ||||+++++++.. ....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELK-HPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcC-CCccceeeeeeecCCCCEEEE
Confidence 37889999999999999999999999999999875443 4555677889999999997 9999999998753 567899
Q ss_pred EEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----HCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 178 VMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACH-----SLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH-----~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
+|||+++++|.+++.. ..++++..++.++.||+.||.||| +.+++|+||+|+||++ +.++.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili---~~~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFL---DANNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEE---ecCCCEEEeccc
Confidence 9999999999998865 357899999999999999999999 8999999999999999 667899999999
Q ss_pred CccccCCCCc-eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 249 LSVFFKPGQI-FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 249 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
++........ .....+++.|+|||.+.+ .++.++|+||||+++|+|++|..||...+...+.+.+..+.... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~ 232 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRR---IPY 232 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCC---Ccc
Confidence 9987654432 345678999999999874 58889999999999999999999999888777777776664432 223
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.++..+.+++.+||..+|++||++.+|++|||+
T Consensus 233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 578999999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=337.24 Aligned_cols=249 Identities=21% Similarity=0.354 Sum_probs=213.2
Q ss_pred cceeecccccccCCeEEEEEEEccCC-----cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATG-----IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
+.|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.+++.+. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQ-HPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcC-CcccceEEEEEcCCC
Confidence 35889999999999999999976555 679999886432 3445667899999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC
Q 008475 174 CVHIVMELCAGGELFDRIIQR----------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD 237 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~ 237 (564)
..|++|||+++++|.+++... ..+++..+..++.||+.||.|||++|++||||||+||++ +
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~---~ 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV---G 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE---c
Confidence 999999999999999998764 457889999999999999999999999999999999999 6
Q ss_pred CCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 008475 238 DDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDA 312 (564)
Q Consensus 238 ~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~ 312 (564)
+++.+||+|||++....... ......+++.|+|||.+. +.++.++|||||||++|||++ |..||.+....++...
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 77889999999987653322 223345678899999887 568999999999999999998 9999999888888888
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 313 VLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 313 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+..+..... ...+++++.+|+.+||+.||.+||++.+|+++
T Consensus 239 i~~~~~~~~---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 239 IRSRQLLPC---PEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHcCCcCCC---cccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 776654322 24689999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=339.32 Aligned_cols=251 Identities=22% Similarity=0.318 Sum_probs=203.3
Q ss_pred ccceeecccccccCCeEEEEEEEcc----------------CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIA----------------TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~----------------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n 161 (564)
.++|.+.++||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.++.+++ |||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~n 80 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLK-DPN 80 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcC-CCC
Confidence 4569999999999999999998532 34579999986542 3445667899999999997 999
Q ss_pred ccEEEEEEecCCeEEEEEeccCCCchHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCE
Q 008475 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRG-------------------HYSERKAAELTRIIVGVVEACHSLGVM 222 (564)
Q Consensus 162 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~~~~~i~~qi~~~l~~lH~~~ii 222 (564)
|+++++++.+....++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999999886532 357788999999999999999999999
Q ss_pred eecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh--
Q 008475 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-- 296 (564)
Q Consensus 223 H~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-- 296 (564)
||||||+|||+ +.++.+||+|||++........ .....++..|+|||++. +.++.++|||||||++|+|++
T Consensus 161 H~dlkp~Nill---~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 161 HRDLATRNCLV---GENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred ccCcchhheEE---cCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 99999999999 6778999999999976543322 12234577899999987 469999999999999999987
Q ss_pred CCCCCCCCCHHHHHHHHHcC----CccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 008475 297 GVPPFWAETQQGIFDAVLKG----HIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL 354 (564)
Q Consensus 297 g~~pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl 354 (564)
+..||...+..+.+..+... .........+.++..+.+||.+||..||++|||+.+|.
T Consensus 238 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 238 KEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred CCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 66788877766655544321 11111112245789999999999999999999999994
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=341.51 Aligned_cols=254 Identities=28% Similarity=0.426 Sum_probs=215.4
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|+..+.||+|+||.||+|.+..++..||+|.+.... .....+.+.+|+.+++.+. ||||+++++++......|+
T Consensus 3 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (277)
T cd06642 3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYITRYYGSYLKGTKLWI 79 (277)
T ss_pred HHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCC-CCccHhhhcccccCCceEE
Confidence 345888999999999999999999899999999986443 2345667899999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||||+++++|.+++.. +.+++..+..++.||+.||.|||++|++|+||+|+||++ +.++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 80 IMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEE---eCCCCEEEccccccccccCcc
Confidence 9999999999987754 578999999999999999999999999999999999999 667889999999987654322
Q ss_pred -ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 258 -IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
......++..|+|||.+.+ .++.++|||||||++|+|++|..||...........+..+... .....++.++.++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 232 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPP---TLEGQYSKPFKEF 232 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCC---CCCcccCHHHHHH
Confidence 2223467889999999875 5888999999999999999999999876665555544433221 1123468899999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
|.+||..+|++||++.++++||||..
T Consensus 233 i~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 233 VEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred HHHHccCCcccCcCHHHHHHhHHHHH
Confidence 99999999999999999999999976
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=336.47 Aligned_cols=257 Identities=24% Similarity=0.333 Sum_probs=215.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||+||+|.+..++..||+|++.... .......+.+|+++++.++ ||||+++++.+.....+++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECR-SPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcC-CCCcceEeeeEecCCEEEEE
Confidence 45899999999999999999999999999999886432 3344677889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||+++++|.+++...+.+++..+..++.+++.||.|||+ .+++||||+|+||++ ++++.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV---NSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE---CCCCcEEEccCCcccchhhh-
Confidence 9999999999998887889999999999999999999997 689999999999999 67789999999998654322
Q ss_pred ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHHcCCccCCCCCC
Q 008475 258 IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQ-----------GIFDAVLKGHIDFESDPW 325 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~-----------~~~~~i~~~~~~~~~~~~ 325 (564)
......|+..|+|||++. +.++.++|||||||++|+|++|..||...... +....+...... ..+.
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 235 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP--RLPS 235 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC--CCCc
Confidence 223457899999999886 46889999999999999999999999765431 222333222111 1111
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
..++.++.+||.+||..||++|||+.++++||||.....
T Consensus 236 ~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 236 SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALR 274 (284)
T ss_pred hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 237789999999999999999999999999999976543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=336.70 Aligned_cols=256 Identities=25% Similarity=0.293 Sum_probs=206.8
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|.+..+|+.||+|++..... ......+..|+.++.+..+||||+++++++..+...|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN--SQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC--cHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 58899999999999999999999999999999875432 2223455667776555556999999999999999999999
Q ss_pred eccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 180 ELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSL-GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 180 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
||++ ++|.+.+.. ...+++..+..++.||+.||.|||++ +++||||||+||++ +.++.+||+|||++....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecccccccc
Confidence 9995 677776654 24689999999999999999999997 99999999999999 778899999999988654
Q ss_pred CCCceecccCCCcccchhhhhh-----cCCCcchHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCccCCCCCCCCC
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLK-----HYGPEADVWTAGVILYILLSGVPPFWAE-TQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DvwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
.....+...++..|+|||.+.+ .++.++|+|||||++|+|++|..||... ...+.+..+..+... ..+...+
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 233 (283)
T cd06617 156 DSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSP--QLPAEKF 233 (283)
T ss_pred cccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCC--CCCcccc
Confidence 3333344568889999998853 3688999999999999999999999643 222333333332211 1122357
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
|.++.+||.+||..+|.+||++.++++||||....
T Consensus 234 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 234 SPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 89999999999999999999999999999998743
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-42 Score=340.14 Aligned_cols=255 Identities=29% Similarity=0.420 Sum_probs=210.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--CeEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--LCVH 176 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~~~ 176 (564)
+.|++.+.||.|+||.||+|.+..+++.+|+|.+...... ......+.+|+.++++++ ||||+++++++... ...|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCcEE
Confidence 3588999999999999999999999999999999754332 223345678999999997 99999999998877 8999
Q ss_pred EEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+||||+. ++|.+++.... .+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||++.....
T Consensus 83 lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL---NNRGILKICDFGLAREYGS 158 (293)
T ss_pred EEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCcEEEeecCceeeccC
Confidence 9999996 58988886643 58999999999999999999999999999999999999 6778999999999886654
Q ss_pred C-CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc-------------
Q 008475 256 G-QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID------------- 319 (564)
Q Consensus 256 ~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~------------- 319 (564)
. .......+++.|+|||.+.+ .++.++||||+|+++|+|++|.+||........+..+......
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 3 23344567889999999874 3688999999999999999999999887766555544321100
Q ss_pred -------------CCCCCCCC--CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 320 -------------FESDPWPL--ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 320 -------------~~~~~~~~--~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.....++. +++.+.+||.+||+.||++|||+.|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00011122 48889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=334.52 Aligned_cols=249 Identities=29% Similarity=0.412 Sum_probs=203.4
Q ss_pred cccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHH---HHhhcCCCCccEEEEEEecCCeEEEEEecc
Q 008475 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI---MHHLAGHKNIVTIKGAYEDSLCVHIVMELC 182 (564)
Q Consensus 106 ~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~---l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 182 (564)
.||+|+||.||+|.+..+++.||+|.+.+..............|..+ ++.. .||+|+.+++++.....+|+||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCEEEEEEecC
Confidence 48999999999999999999999999976543222222223344433 3334 4999999999999999999999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecc
Q 008475 183 AGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV 262 (564)
Q Consensus 183 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~ 262 (564)
+|++|..++...+.+++..++.++.|++.||.|||+.+|+||||||+||++ +.++.+||+|||++....... ....
T Consensus 80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili---~~~~~~kl~dfg~~~~~~~~~-~~~~ 155 (278)
T cd05606 80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK-PHAS 155 (278)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE---CCCCCEEEccCcCccccCccC-CcCc
Confidence 999999999888889999999999999999999999999999999999999 677889999999987654322 2345
Q ss_pred cCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 263 VGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAET---QQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 263 ~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
.|+..|+|||.+.+ .++.++||||+||++|+|++|..||.... .......+...... ....++.++.++|.
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~~~~~li~ 231 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE----LPDSFSPELRSLLE 231 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCC----CCCcCCHHHHHHHH
Confidence 78999999999873 48899999999999999999999997763 23332223222222 22346899999999
Q ss_pred HhcccCCCCCC-----CHHHHhcCCCcCCCC
Q 008475 338 KMLCSQPSERL-----TAHEVLCHPWICENG 363 (564)
Q Consensus 338 ~~l~~dp~~R~-----s~~~vl~hp~~~~~~ 363 (564)
+||..+|.+|| ++.++++||||+...
T Consensus 232 ~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 232 GLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred HHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 99999999999 999999999998754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=333.83 Aligned_cols=254 Identities=28% Similarity=0.438 Sum_probs=216.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||.|+||.||+|.+..++..||+|.+.... .......+.+|+.+++.+. ||||+++++.+..+...|+|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcC-CCCEeEEEEEEEeCCeEEEE
Confidence 45888999999999999999998899999999886443 2344567889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
|||+++++|.+++.. ..+++..+..++.|++.|+.|||+.|++|+||+|+||++ +.++.++|+|||++.......
T Consensus 81 ~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i---~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 81 MEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE---CCCCCEEEeecccceecccchh
Confidence 999999999988754 568999999999999999999999999999999999999 677889999999987654322
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
......++..|+|||.+.. .++.++|+|||||++|+|++|..||...........+..+... .....++.++.++|
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i 233 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP---TLEGNYSKPLKEFV 233 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC---CCCcccCHHHHHHH
Confidence 2233567889999999874 5788999999999999999999999877766666665443221 12235788999999
Q ss_pred HHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.+||..+|.+||++.++++||||.+.
T Consensus 234 ~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 234 EACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHHccCChhhCcCHHHHHhCHHHhhh
Confidence 99999999999999999999999874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=338.84 Aligned_cols=256 Identities=27% Similarity=0.452 Sum_probs=216.3
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
....|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+. ||||+++++++.+....|
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-HPNTIEYKGCYLREHTAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEEeCCeEE
Confidence 3456999999999999999999999899999999987554445556677899999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+||||+. |+|.+.+.. ...+++..+..++.||+.||.|||+.||+||||+|+||++ +.++.++|+|||++....+
T Consensus 92 lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~---~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 92 LVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLVSP 167 (307)
T ss_pred EEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---CCCCCEEEeecCcceecCC
Confidence 9999996 567676653 4568999999999999999999999999999999999999 7778999999999876543
Q ss_pred CCceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
. ....+++.|+|||++. +.++.++||||||+++|+|++|..||...+.......+..... +......++..
T Consensus 168 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 242 (307)
T cd06607 168 A---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLSSNDWSDY 242 (307)
T ss_pred C---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC--CCCCchhhCHH
Confidence 3 2456788999999874 3588899999999999999999999988776655544443221 11112346889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+.++|.+||..+|++||++.+++.||||...
T Consensus 243 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 243 FRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 9999999999999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=332.61 Aligned_cols=250 Identities=36% Similarity=0.574 Sum_probs=219.1
Q ss_pred ccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCCc
Q 008475 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGE 186 (564)
Q Consensus 107 lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 186 (564)
||.|+||.||+|.+..+++.||+|++...........+.+.+|+++++++. ||||+++++.+......|+||||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999999899999999997655444456778899999999997 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC---------
Q 008475 187 LFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ--------- 257 (564)
Q Consensus 187 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~--------- 257 (564)
|.+++...+.+++..+..++.||+.||.|||+.|++||||+|+||++ +.++.++|+|||++.......
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI---DSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE---cCCCCEEEEecccchhcccCcccccccccc
Confidence 99999887789999999999999999999999999999999999999 778899999999987643321
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
......++..|+|||.+.+ .++.++||||||+++|+|++|..||......+....+..+...++.. ..++..+.++|
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i 234 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEAIDLI 234 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCcc--ccCCHHHHHHH
Confidence 2234567889999999874 48889999999999999999999999888888888887765544332 23589999999
Q ss_pred HHhcccCCCCCCCH---HHHhcCCCcCCC
Q 008475 337 RKMLCSQPSERLTA---HEVLCHPWICEN 362 (564)
Q Consensus 337 ~~~l~~dp~~R~s~---~~vl~hp~~~~~ 362 (564)
.+||+.+|++|||+ .++|+||||++.
T Consensus 235 ~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 235 SKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred HHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 99999999999999 999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=334.35 Aligned_cols=256 Identities=28% Similarity=0.494 Sum_probs=215.8
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc--CCCCccEEEEEEecCCeEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA--GHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~~~~~~l 177 (564)
.|++.+.||.|+||.||+|.+..++..||+|.+.... .......+.+|+.+++.+. .||||+++++++..+...|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 3778899999999999999999999999999986542 3344567889999999986 59999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||||+++++|.+++.. +.+++..+..++.|++.||.|||+.||+|+||+|+||++ +..+.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV---TNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE---cCCCCEEEccCCceeecCCCc
Confidence 9999999999988755 478999999999999999999999999999999999999 667899999999987765432
Q ss_pred -ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 258 -IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
......|+..|+|||.+.+ .++.++|+|||||++|+|++|..||...........+.... .+......++.++.+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 233 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK--PPRLEDNGYSKLLRE 233 (277)
T ss_pred cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC--CCCCCcccCCHHHHH
Confidence 2334578889999999864 37889999999999999999999998776655444333321 111112237889999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
++.+||..||++||++.+++.||||++..
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 99999999999999999999999997754
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=337.78 Aligned_cols=257 Identities=25% Similarity=0.302 Sum_probs=208.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|+..+.||+|+||.||++.+..+++.||+|.+..... ......+.+|+.++.++.+||||+++++++..+...+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 46677899999999999999999999999999875432 2445678899999999977999999999999999999999
Q ss_pred eccCCCchHHH---HH--hcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 180 ELCAGGELFDR---II--QRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 180 e~~~~~~L~~~---l~--~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
||+. ++|.++ +. ....+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++...
T Consensus 83 e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 83 ELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL---DRNGNIKLCDFGISGQL 158 (288)
T ss_pred eccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE---ccCCcEEEeecchhHHh
Confidence 9985 455443 22 23579999999999999999999997 499999999999999 66788999999998765
Q ss_pred CCCCceecccCCCcccchhhhhh----cCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCc-cCCCCCCCC
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLK----HYGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHI-DFESDPWPL 327 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~-~~~~~~~~~ 327 (564)
..........+++.|+|||++.+ .++.++|||||||++|+|++|+.||..... .+....+..+.. .........
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd06616 159 VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEERE 238 (288)
T ss_pred ccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCc
Confidence 44433344568899999999874 488999999999999999999999976542 122222222221 122222235
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
++.++.+||.+||..||++|||+++|++||||...
T Consensus 239 ~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 239 FSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 78999999999999999999999999999999763
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=345.63 Aligned_cols=260 Identities=31% Similarity=0.479 Sum_probs=209.0
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS---- 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---- 172 (564)
+.++|++.+.||+|+||.||+|.+..+|+.||+|++.... .......+.+|+.+++.++ ||||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFES 79 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCcCchhheeecccccc
Confidence 4567999999999999999999999999999999986322 2334566788999999997 99999999887643
Q ss_pred -CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 173 -LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 173 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
...|+|+||+. ++|...+. ...+++..+..++.||+.||.|||+.||+||||||+|||+ +..+.+||+|||++.
T Consensus 80 ~~~~~lv~e~~~-~~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~ 154 (336)
T cd07849 80 FNDVYIVQELME-TDLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLAR 154 (336)
T ss_pred cceEEEEehhcc-cCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECccccee
Confidence 35899999995 57877664 4579999999999999999999999999999999999999 778899999999987
Q ss_pred ccCCCC----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--------
Q 008475 252 FFKPGQ----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH-------- 317 (564)
Q Consensus 252 ~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~-------- 317 (564)
...... ......|++.|+|||.+.+ .++.++||||+||++|+|++|+.||.+.+.......+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 654322 1233578899999998763 58899999999999999999999997765433322221100
Q ss_pred --------------ccC-CC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 318 --------------IDF-ES----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 318 --------------~~~-~~----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
... .. ...+.+++++.+||.+||+.+|++|||+.++++||||.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 000 00 012346788999999999999999999999999999987643
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-41 Score=332.75 Aligned_cols=256 Identities=28% Similarity=0.494 Sum_probs=217.9
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|...+.||+|++|.||++.+..++..+|+|++... .....+.+.+|+.+++.+. ||||+++++++......++|+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~-h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQ-HPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcC-CCChheEEEEEEcCCeEEEEE
Confidence 455677999999999999999889999999988533 2334566889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-c
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-I 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-~ 258 (564)
||+++++|.+++.. +++++..+..++.|++.||.|||++||+||||+|+||++ +.++.++|+|||++....... .
T Consensus 96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~d~g~~~~~~~~~~~ 171 (285)
T cd06648 96 EFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEVPR 171 (285)
T ss_pred eccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE---cCCCcEEEcccccchhhccCCcc
Confidence 99999999998876 679999999999999999999999999999999999999 777899999999876543221 2
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
.....|++.|+|||.+.+ .++.++|||||||++|+|++|..||...+.......+..+..... .....++..+.++|.
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~ 250 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKL-KNLHKVSPRLRSFLD 250 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCC-cccccCCHHHHHHHH
Confidence 233568899999999875 589999999999999999999999988887777766665532221 122347899999999
Q ss_pred HhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 338 KMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+||..+|++||++.++++||||++...
T Consensus 251 ~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 251 RMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred HHcccChhhCcCHHHHccCcccccCCC
Confidence 999999999999999999999988553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=338.08 Aligned_cols=255 Identities=29% Similarity=0.457 Sum_probs=212.2
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+++++.+. |+||+++++++......++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEEE
Confidence 58999999999999999999999999999999865432 3344577899999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
||++++.+..++.+...+++..+..++.||+.||.|||+.+++||||+|+||++ ++++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~---~~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEEeeecccccCCCccc
Confidence 999887776666666679999999999999999999999999999999999999 778899999999988765433
Q ss_pred ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc-----------------
Q 008475 258 IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI----------------- 318 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~----------------- 318 (564)
......++..|+|||++.+ .++.++||||||+++|+|++|.+||.+....+.+..+.....
T Consensus 157 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07833 157 PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFA 236 (288)
T ss_pred cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccc
Confidence 3345678899999999873 578899999999999999999999987665443332221000
Q ss_pred --cCCC---------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 319 --DFES---------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 319 --~~~~---------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.++. .....++.++.+||.+||..+|++||+++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0000 0112348899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=336.48 Aligned_cols=254 Identities=27% Similarity=0.425 Sum_probs=204.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|++|.||+|.+..+++.||+|.+..... ......+.+|+++++.+. ||||+++++++.+....++|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLK-HANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCC-CcceeeEEEEEecCCeEEEE
Confidence 459999999999999999999998999999999865432 112234668999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 82 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 82 FEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI---SERGELKLADFGLARAKSVPS 157 (291)
T ss_pred EecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE---cCCCCEEECccccccccCCCC
Confidence 99996 4898888654 468999999999999999999999999999999999999 77789999999998654321
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCcc--------------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHID-------------- 319 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~-------------- 319 (564)
.......++..|+|||++.+ .++.++||||+||++|+|++|..||.... ..+....+.+....
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 22233456888999999864 47889999999999999999999997655 22222222110000
Q ss_pred -----CC-------CCCCCCCC--HHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 320 -----FE-------SDPWPLIS--DSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 320 -----~~-------~~~~~~~s--~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.. ....+.++ .++.++|.+||.++|++|||+.++++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 00011234 788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=346.26 Aligned_cols=260 Identities=30% Similarity=0.439 Sum_probs=212.8
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS---- 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---- 172 (564)
+..+|.+.+.||+|+||.||+|.+..++..||||.+..... .......+.+|+.+++.+. ||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~ni~~~~~~~~~~~~~~ 80 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLD-HENVIAIKDIMPPPHREA 80 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcC-CCCccchHHheecccccc
Confidence 34569999999999999999999999999999999865322 3334456778999999997 99999999988654
Q ss_pred -CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 173 -LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 173 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
...|+||||+ +++|.+++...+++++..+..++.||+.||.|||+++++||||||+||++ +.++.+||+|||++.
T Consensus 81 ~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 81 FNDVYIVYELM-DTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL---NANCDLKICDFGLAR 156 (337)
T ss_pred cCcEEEEEeCC-CCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECcCcccc
Confidence 3589999999 47899988888889999999999999999999999999999999999999 677899999999998
Q ss_pred ccCCC-CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------------
Q 008475 252 FFKPG-QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG------------ 316 (564)
Q Consensus 252 ~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~------------ 316 (564)
..... .......++..|+|||.+.+ .++.++|||||||++|+|++|++||.+.+.......+...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 65433 23344568889999998863 5889999999999999999999999776543333222110
Q ss_pred -----------CccCC----CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 317 -----------HIDFE----SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 317 -----------~~~~~----~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
..... ....+.+++++.+||.+||+.+|++|||+.++++||||...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred CchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 00000 01124578999999999999999999999999999999764
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=337.61 Aligned_cols=253 Identities=26% Similarity=0.424 Sum_probs=208.2
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++.+.||.|++|.||+|.+..++..||||.+..... .......+.+|++++++++ ||||+++++++.+....++|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcC-CCCCcchhhhcccCCcEEEEee
Confidence 7889999999999999999999999999998864432 2333457889999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-C
Q 008475 181 LCAGGELFDRIIQ--RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-Q 257 (564)
Q Consensus 181 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~ 257 (564)
|+. ++|..++.. ...+++..+..++.|++.||.|||+.+++||||+|+||++ +.++.+||+|||++...... .
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill---~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEeeccchhhcccCcc
Confidence 995 688888765 3568999999999999999999999999999999999999 77789999999998765432 2
Q ss_pred ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc-----------------
Q 008475 258 IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI----------------- 318 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~----------------- 318 (564)
......+++.|+|||++.+ .++.++|||||||++|+|+||+.||.+.+.......+.+...
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYK 235 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHH
Confidence 2334456889999998864 368899999999999999999999987765444333322100
Q ss_pred -cCC-------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 319 -DFE-------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 319 -~~~-------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.++ ....+.+++++.++|.+||+.||++|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 236 PSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred hhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 000 00123478899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=339.29 Aligned_cols=255 Identities=26% Similarity=0.404 Sum_probs=204.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-----
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL----- 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~----- 173 (564)
+.|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.++ ||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCC-CCCccceEEEEecccccccC
Confidence 459999999999999999999999999999999865432 2222345668999999997 999999999886543
Q ss_pred ---eEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 174 ---CVHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 174 ---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
..++||||+. ++|.+.+.... .+++..+..++.||+.||.|||++|++|+||||+||++ +.++.+||+|||+
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~ 165 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADFGL 165 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEEECcCCC
Confidence 4699999995 57887776543 68999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCC-----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC
Q 008475 250 SVFFKPGQ-----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES 322 (564)
Q Consensus 250 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 322 (564)
+....... ......++..|+|||.+.+ .++.++||||||+++|+|++|..||.+.........+..-...++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 87653221 1233567888999998864 3788999999999999999999999887765544433321110000
Q ss_pred CC----------------------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 323 DP----------------------------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 323 ~~----------------------------~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.. ....++.+.+||.+||..||.+|||++++|+||||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 00 01135678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=336.26 Aligned_cols=260 Identities=28% Similarity=0.419 Sum_probs=210.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|++|.||+|.+..+++.||+|.+..... .......+.+|+++++++. ||||+++++++.+....|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQ-HGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhcc-CCCEeeEEEEEecCCeEEEE
Confidence 358999999999999999999999999999999865432 2233456788999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 179 MELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
|||++ ++|.+.+..... +++..+..++.||+.||.|||+++++||||+|+||++.. .++.+||+|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNALKLADFGLARAFGIP 156 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCEEEEcccccccccCCC
Confidence 99995 578887765443 578889999999999999999999999999999999942 3457999999998764322
Q ss_pred -CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC-------------
Q 008475 257 -QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF------------- 320 (564)
Q Consensus 257 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~------------- 320 (564)
.......+++.|+|||.+.+ .++.++||||+||++|+|+||.+||......+.+..+.......
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 22234567889999999864 47889999999999999999999998877655544432210000
Q ss_pred --------CC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 321 --------ES----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 321 --------~~----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.. ...+.+++++.++|.+||+.+|++||++.++++||||.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 00 01235788999999999999999999999999999998754
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=337.72 Aligned_cols=249 Identities=24% Similarity=0.347 Sum_probs=205.7
Q ss_pred ceeecccccccCCeEEEEEEEccCCcE--EEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIE--FACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~--vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.|++.+.||+|+||.||+|.+..++.. +|+|.+.. .........+.+|+.++.++.+||||+++++++..+..+|+
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc--cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 488899999999999999998877764 57776643 22445567788999999999569999999999999999999
Q ss_pred EEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCc
Q 008475 178 VMELCAGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS 241 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~ 241 (564)
||||+++++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||+ +.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili---~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe---cCCCc
Confidence 999999999999987543 47899999999999999999999999999999999999 67789
Q ss_pred EEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCcc
Q 008475 242 LKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHID 319 (564)
Q Consensus 242 ~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~ 319 (564)
+||+|||++.............++..|+|||.+.+ .++.++|||||||++|+|+| |..||...+..+..+.+..+.
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-- 240 (303)
T cd05088 163 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-- 240 (303)
T ss_pred EEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC--
Confidence 99999999864321111112233567999998874 48899999999999999998 999998888777776665432
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 320 FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 320 ~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.......+++++.+||.+||+.+|++||++++++.+
T Consensus 241 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 -RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred -cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 111223478899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=321.88 Aligned_cols=264 Identities=28% Similarity=0.430 Sum_probs=206.6
Q ss_pred cceeecccccccCCeEEEEEEEccCC----cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-CC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATG----IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-SL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-~~ 173 (564)
..|++...||+|.||.||+|..+.++ +.+|||.+........ .-...-+|+.+++.|+ ||||+.+..+|-. +.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG-iS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG-ISMSACREIALLRELK-HPNVISLVKVFLSHDK 101 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC-cCHHHHHHHHHHHHhc-CCcchhHHHHHhccCc
Confidence 34899999999999999999655443 3789999875532211 1234568999999998 9999999999877 88
Q ss_pred eEEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC-CCCCcEEEeeC
Q 008475 174 CVHIVMELCAGGELFDRIIQR-----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK-DDDFSLKAIDF 247 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~-~~~~~~kl~Df 247 (564)
.+++++||.+. +|.+.|+-. +.++...++.|+.||+.|+.|||++-|+||||||.|||+..+ .+.|.|||+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 99999999965 788877542 358999999999999999999999999999999999999532 24589999999
Q ss_pred CCccccCCC----CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHH
Q 008475 248 GLSVFFKPG----QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQ---------QGIFDA 312 (564)
Q Consensus 248 G~~~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~---------~~~~~~ 312 (564)
|+++.+... ......+.|.+|+|||++.+ +|+.+.|||++|||+.||+|-++.|.+... .+.+..
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~r 260 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDR 260 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHH
Confidence 999987543 13345678999999999985 699999999999999999999998865432 123333
Q ss_pred HHcCCccCCCCCCC---------------------------------CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 313 VLKGHIDFESDPWP---------------------------------LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 313 i~~~~~~~~~~~~~---------------------------------~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
|.+-.-......|+ .-++...+|+.+||..||.+|+|++++|+|+||
T Consensus 261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF 340 (438)
T KOG0666|consen 261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYF 340 (438)
T ss_pred HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccc
Confidence 33211111111111 124568899999999999999999999999999
Q ss_pred CCCCCC
Q 008475 360 CENGVA 365 (564)
Q Consensus 360 ~~~~~~ 365 (564)
.+....
T Consensus 341 ~~d~lp 346 (438)
T KOG0666|consen 341 TEDPLP 346 (438)
T ss_pred ccCCCC
Confidence 986544
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=326.88 Aligned_cols=248 Identities=30% Similarity=0.492 Sum_probs=214.9
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|+||.||++.+..++..||+|.+.... .....+.+..|+.+++.+. ||||+++++.+.+...+|+||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMK-HPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEE
Confidence 3788999999999999999999999999999986443 3345667889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 180 ELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 180 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||++ +.++.++|+|||.+......
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeecccc
Confidence 999999999988653 358999999999999999999999999999999999999 77789999999998765432
Q ss_pred CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
.......+++.|+|||++.+ .++.++|+||||+++|+|++|..||...+.......+..+..... ...++..+.+|
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 231 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPL---PSHYSYELRSL 231 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCC---CcccCHHHHHH
Confidence 22334678899999999874 588999999999999999999999998887777777766654322 23578899999
Q ss_pred HHHhcccCCCCCCCHHHHhcC
Q 008475 336 IRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~h 356 (564)
|.+||..||++||++.+++.-
T Consensus 232 i~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 232 IKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHhCCcccCCCHHHHhhc
Confidence 999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-41 Score=329.94 Aligned_cols=252 Identities=25% Similarity=0.445 Sum_probs=211.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|++..++..||+|.+.............+.+|+.+++.++ ||||+++++++.+....++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC-CcceeeeeeeEEECCeEEEE
Confidence 35899999999999999999999999999999987655445566677889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 179 MELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|||+++++|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||++ +.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~---~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEE---cCCCCEEECccccceecc
Confidence 999999999887753 3458999999999999999999999999999999999999 677889999999988754
Q ss_pred CCC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET--QQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
... ......+++.|+|||.+.+ .++.++|+||+|+++|+|++|..||.... .......+.... ++..+...++.
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 235 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--YPPLPTEHYSE 235 (267)
T ss_pred chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--CCCCChhhcCH
Confidence 332 1224568889999999874 58899999999999999999999997653 234455544432 22222335788
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+.++|.+||..+|++||++.++++.
T Consensus 236 ~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 236 KLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred HHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 99999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=334.71 Aligned_cols=253 Identities=36% Similarity=0.625 Sum_probs=221.8
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|.+.+.||.|+||.||+|.+..++..||+|++.+...........+..|+.+++++.+||||+++++++......++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 58899999999999999999999999999999977555445556778899999999977999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
|++++++|.+++...+.+++..+..++.|++.||.|||++|++|+||+|+||++ +.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i---~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEecCCccccccCCcccc
Confidence 999999999999888889999999999999999999999999999999999999 677899999999987654322
Q ss_pred -------------------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Q 008475 258 -------------------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH 317 (564)
Q Consensus 258 -------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~ 317 (564)
......++..|+|||++.. .++.++||||||+++++|++|..||........+..+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 238 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE 238 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcC
Confidence 1223457889999998874 58889999999999999999999998887766666666544
Q ss_pred ccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH----HHHhcCCCc
Q 008475 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTA----HEVLCHPWI 359 (564)
Q Consensus 318 ~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~----~~vl~hp~~ 359 (564)
..++ ..+++.+.+||.+||..+|.+||++ .++++||||
T Consensus 239 ~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 239 YSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 4333 3468999999999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=348.04 Aligned_cols=260 Identities=31% Similarity=0.523 Sum_probs=230.1
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|..++.||-|+||.|.++....|...||+|.+.+..+...+.+..++.|-.||..-. ++.||+||-.|++++.+|+||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD-n~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC-CcceEEEEEEeccCCceEEEE
Confidence 4888999999999999999999999999999999988888888999999999999986 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-----
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK----- 254 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~----- 254 (564)
+|++||++..+|.+-+-|+|..++.++..+.+|+++.|..|+|||||||+|||+ |.+|+|||+|||++.-+.
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceecccc
Confidence 999999999999999999999999999999999999999999999999999999 899999999999975431
Q ss_pred ----CCC----------------------------------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHH
Q 008475 255 ----PGQ----------------------------------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILL 295 (564)
Q Consensus 255 ----~~~----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ell 295 (564)
.+. .....+||+.|+|||++.+ .|+..+|+||.|||||||+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 000 0012579999999999985 5999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCCCcCCCCC
Q 008475 296 SGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL---TAHEVLCHPWICENGV 364 (564)
Q Consensus 296 tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~---s~~~vl~hp~~~~~~~ 364 (564)
.|++||...++.+.-..|+...-.+...+...+|+++.+||.+++ -+++.|+ .+++|..||||+....
T Consensus 866 ~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDf 936 (1034)
T KOG0608|consen 866 VGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDF 936 (1034)
T ss_pred hCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccch
Confidence 999999988887776666665555556666789999999999977 5678887 5778999999997543
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=343.93 Aligned_cols=267 Identities=28% Similarity=0.459 Sum_probs=219.2
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
...+.++|++.+.||+|+||.||+|.+..++..||+|++.... ........+.+|+.+++.+. ||||+++.+++....
T Consensus 10 ~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 87 (343)
T cd07851 10 VWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMD-HENVIGLLDVFTPAS 87 (343)
T ss_pred eecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhcc-CCCHHHHHHHhhccc
Confidence 3346677999999999999999999999999999999886432 23344566788999999996 999999998887655
Q ss_pred e------EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 174 C------VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 174 ~------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
. .++|+||+ +++|.+++.. .++++..+..++.||+.||.|||+.||+||||||+||++ +.++.++|+||
T Consensus 88 ~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill---~~~~~~kL~df 162 (343)
T cd07851 88 SLEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDF 162 (343)
T ss_pred cccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEccc
Confidence 4 89999999 7799887765 579999999999999999999999999999999999999 67789999999
Q ss_pred CCccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC----
Q 008475 248 GLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE---- 321 (564)
Q Consensus 248 G~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~---- 321 (564)
|++...... .....++..|+|||.+.+ .++.++|||||||++|+|++|+.||.+....+.+..+.......+
T Consensus 163 g~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 163 GLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred ccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence 998865432 344577889999999864 478899999999999999999999988777665555443211000
Q ss_pred -------------------C----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCC
Q 008475 322 -------------------S----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRS 369 (564)
Q Consensus 322 -------------------~----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~ 369 (564)
. .....+++.+.+||.+||..||++|||+.+|++||||..........
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~~ 311 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDEP 311 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcccc
Confidence 0 01124688999999999999999999999999999999876554433
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=328.89 Aligned_cols=254 Identities=28% Similarity=0.384 Sum_probs=219.2
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|++|.||+|.+..+++.||+|++..... ......+.+|+..+.+++ ||||+++++++......++||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEEE
Confidence 48889999999999999999999999999999875432 245678899999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
||+++++|.+++.....+++..+..++.|++.||.|||+ .+++||||+|+||++ +.++.++|+|||++........
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---CCCCCEEEccCccceecccCCC
Confidence 999999999999888889999999999999999999999 999999999999999 7788999999999887654332
Q ss_pred e-ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHcCCccCCCCCCCC-CCHHH
Q 008475 259 F-TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE---TQQGIFDAVLKGHIDFESDPWPL-ISDSA 332 (564)
Q Consensus 259 ~-~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~-~s~~~ 332 (564)
. ....++..|+|||.+.+ .++.++|+||||+++|+|++|..||... ...+....+....... .... ++..+
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l 232 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPS---LPAEEFSPEF 232 (264)
T ss_pred cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCC---CCcccCCHHH
Confidence 2 24567889999999874 5888999999999999999999999776 4455555555432221 1123 78999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.++|.+||..+|++||++.++++||||+..
T Consensus 233 ~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 233 RDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999999999999999999999999999753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=333.02 Aligned_cols=253 Identities=28% Similarity=0.459 Sum_probs=208.7
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||.|++|.||+|++..+|..||+|++..... ......+.+|+.+++++. ||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELK-HENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhc-CCCEeeeeeeEeeCCcEEEEE
Confidence 38889999999999999999999999999999875432 223456778999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 180 ELCAGGELFDRIIQR---GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 180 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||+++ +|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||++ ++++.++|+|||++......
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~---~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGIP 153 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCcEEEeecchhhhhcCC
Confidence 99975 888887654 358999999999999999999999999999999999999 77789999999998754332
Q ss_pred -CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC------------
Q 008475 257 -QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE------------ 321 (564)
Q Consensus 257 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~------------ 321 (564)
.......++..|+|||.+.+ .++.++|||||||++|+|++|..||.+.+..+....+.+......
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 12234567889999999864 378899999999999999999999988776655544432110000
Q ss_pred --C-----------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 322 --S-----------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 322 --~-----------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
. ...+.++..+.++|.+||+.||.+||++.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0 0012357889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-41 Score=335.60 Aligned_cols=256 Identities=29% Similarity=0.505 Sum_probs=216.6
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|.....||+|+||.||+|.+..++..||+|++..... ...+.+.+|+.+++.+. ||||+++++.+..+...|+||
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQ-HQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCC-CCchhhhhhheeeCCeEEEEE
Confidence 35566789999999999999998999999999865432 23456889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-c
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-I 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-~ 258 (564)
||+++++|..++.. ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++....... .
T Consensus 98 e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill---~~~~~~kL~dfg~~~~~~~~~~~ 173 (297)
T cd06659 98 EFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPK 173 (297)
T ss_pred ecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE---ccCCcEEEeechhHhhccccccc
Confidence 99999999886644 568999999999999999999999999999999999999 778899999999987544322 2
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
.....++..|+|||++.+ .++.++|||||||++|+|++|+.||......+....+...... .......++..+.++|.
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~i~ 252 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP-KLKNAHKISPVLRDFLE 252 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC-CccccCCCCHHHHHHHH
Confidence 234678899999999974 5899999999999999999999999887776666655443222 22233457889999999
Q ss_pred HhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 338 KMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+||+.+|.+||++.++++||||.+...
T Consensus 253 ~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 253 RMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HHhcCCcccCcCHHHHhhChhhccCCC
Confidence 999999999999999999999987544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=356.56 Aligned_cols=263 Identities=21% Similarity=0.270 Sum_probs=196.7
Q ss_pred cccccceeecccccccCCeEEEEEEEccCC-cEEEEE--------------EeccccCCCHHhHHHHHHHHHHHHhhcCC
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATG-IEFACK--------------SISKRKLISREDVEDVRREIQIMHHLAGH 159 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vavK--------------~~~~~~~~~~~~~~~~~~E~~~l~~l~~h 159 (564)
+.+.++|++++.||+|+||+||+|..+... ..++.| .+.+...........+.+|+.+|+++. |
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~-H 222 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN-H 222 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC-C
Confidence 345677999999999999999998764322 222222 111111112334556889999999997 9
Q ss_pred CCccEEEEEEecCCeEEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEee
Q 008475 160 KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR-----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV 234 (564)
Q Consensus 160 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~ 234 (564)
|||+++++++......|+|+|++ +++|.+++... .......++.++.||+.||.|||++||+||||||+|||+
T Consensus 223 pnIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl- 300 (501)
T PHA03210 223 ENILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL- 300 (501)
T ss_pred CCcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE-
Confidence 99999999999999999999999 56777776542 224467788999999999999999999999999999999
Q ss_pred cCCCCCcEEEeeCCCccccCCCC--ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC---CHHH
Q 008475 235 NKDDDFSLKAIDFGLSVFFKPGQ--IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE---TQQG 308 (564)
Q Consensus 235 ~~~~~~~~kl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~---~~~~ 308 (564)
+.++.+||+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|||++|..|+... ....
T Consensus 301 --~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 301 --NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred --CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 777899999999998765432 2234679999999999985 5999999999999999999988654322 1222
Q ss_pred HHHHHHcCC----ccCCC------------------C------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 309 IFDAVLKGH----IDFES------------------D------PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 309 ~~~~i~~~~----~~~~~------------------~------~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
.+..+.... ..++. . ....++..+.++|.+||.+||.+|||+.|+|.||||.
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~ 458 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFS 458 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence 222211110 00000 0 0012567788999999999999999999999999997
Q ss_pred CC
Q 008475 361 EN 362 (564)
Q Consensus 361 ~~ 362 (564)
..
T Consensus 459 ~~ 460 (501)
T PHA03210 459 AE 460 (501)
T ss_pred cC
Confidence 64
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=330.47 Aligned_cols=256 Identities=28% Similarity=0.428 Sum_probs=209.6
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CCeEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SLCVHI 177 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~~l 177 (564)
.|+..+.||.|++|.||+|.+..+++.+|+|.+.... .......+.+|+++++.++ ||||+++++++.+ ...+|+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCK-SPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCC-CCCeeeeeeEEEccCCCeEEE
Confidence 5888999999999999999999999999999987543 2345677899999999997 9999999998865 447899
Q ss_pred EEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 178 VMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||++ +..+.++|+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL---TRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---ecCCeEEEeeccccccc
Confidence 9999999999887643 3458999999999999999999999999999999999999 66778999999998764
Q ss_pred CCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCccC-CCCCC-
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE-----TQQGIFDAVLKGHIDF-ESDPW- 325 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~-----~~~~~~~~i~~~~~~~-~~~~~- 325 (564)
.... .....++..|+|||.+.+ .++.++|||||||++|+|++|..||... ...+....+....... .....
T Consensus 156 ~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd06621 156 VNSL-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGN 234 (287)
T ss_pred cccc-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCC
Confidence 4322 224567889999998874 5899999999999999999999999765 2334444444322111 11111
Q ss_pred -CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 326 -PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 326 -~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
..+++.+.+||.+||..+|.+|||+.|++.||||+..
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred CCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 2356789999999999999999999999999999653
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=344.08 Aligned_cols=262 Identities=26% Similarity=0.407 Sum_probs=213.4
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec----CC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----SL 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----~~ 173 (564)
.+.|++.+.||.|+||.||+|.+..++..||+|++..... .......+.+|+.+++.+. ||||+++++++.. ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCc
Confidence 3569999999999999999999999999999999875432 2334567788999999997 9999999998763 45
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.+++||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 82 DVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGL 157 (334)
T ss_pred eEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEecccccceee
Confidence 7899999994 6899988877789999999999999999999999999999999999999 77889999999998765
Q ss_pred CCCC-----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC----------
Q 008475 254 KPGQ-----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG---------- 316 (564)
Q Consensus 254 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~---------- 316 (564)
.... ......++..|+|||.+.+ .++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 3221 1234578899999999864 4889999999999999999999999876644333222110
Q ss_pred -------------CccCCCC----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 317 -------------HIDFESD----PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 317 -------------~~~~~~~----~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
....... ..+.+++++.++|.+||+.+|.+||++.+++.||||......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~ 303 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDP 303 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence 0000000 124468999999999999999999999999999999865443
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-42 Score=357.15 Aligned_cols=247 Identities=23% Similarity=0.407 Sum_probs=217.0
Q ss_pred cceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
......+.||+|+||+||+|+-. .....||||.++... +....+.|++|++++..|. |||||+|+|++..++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~-H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQ-HPNIVRLLGVCREGD 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhcc-CCCeEEEEEEEccCC
Confidence 33566889999999999999843 234579999997553 4557789999999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCC
Q 008475 174 CVHIVMELCAGGELFDRIIQRG--------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD 239 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~ 239 (564)
.+|+|+|||..|+|.++|.... +++..+...||.||+.|+.||-++.+|||||-..|+|| .++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---ge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---GEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---ccc
Confidence 9999999999999999997532 27788999999999999999999999999999999999 888
Q ss_pred CcEEEeeCCCccccCCCCceecc---cCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 008475 240 FSLKAIDFGLSVFFKPGQIFTDV---VGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVL 314 (564)
Q Consensus 240 ~~~kl~DfG~~~~~~~~~~~~~~---~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~ 314 (564)
..|||+|||+++.+-..+++... .-..+|||||.|. ++|+.+|||||+||+|||+.+ |..||++...+++++.|.
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~ 719 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR 719 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH
Confidence 99999999999987766554422 2245899999887 789999999999999999999 999999999999999999
Q ss_pred cCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 008475 315 KGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL 354 (564)
Q Consensus 315 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl 354 (564)
+|.. ++ ....+|.++.+|+..||+.+|.+||++.||-
T Consensus 720 ~g~l-L~--~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 720 AGQL-LS--CPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred cCCc-cc--CCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 9987 33 3367999999999999999999999999873
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=331.17 Aligned_cols=248 Identities=22% Similarity=0.362 Sum_probs=211.6
Q ss_pred cceeecccccccCCeEEEEEEEcc-----CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIA-----TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
+.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .....+.+.+|+++++.+. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQ-HENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcC-CCCchheeeEEecCC
Confidence 348899999999999999998743 45789999986543 3345678899999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCC
Q 008475 174 CVHIVMELCAGGELFDRIIQRG--------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD 239 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~ 239 (564)
..++||||+++++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+||++ +.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE---cCC
Confidence 9999999999999999997542 37889999999999999999999999999999999999 777
Q ss_pred CcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 008475 240 FSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVL 314 (564)
Q Consensus 240 ~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~ 314 (564)
+.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||......+....+.
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT 238 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 8999999999876433221 123345678999999874 58999999999999999998 999999888888888887
Q ss_pred cCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 315 KGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 315 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+..... ...++..+.++|.+||..||++||++.++++
T Consensus 239 ~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 239 QGRLLQR---PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred cCCcCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 6654332 2357899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=333.81 Aligned_cols=253 Identities=28% Similarity=0.429 Sum_probs=208.8
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++.+.||.|++|.||+|.+..+|..||+|++..... .......+.+|+++++.++ ||||+++++++.+....|+|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEe
Confidence 5678899999999999999999999999999875432 2233456778999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-C
Q 008475 181 LCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-Q 257 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~ 257 (564)
|+ +++|.+++.... .+++..+..++.|++.||.|||+++++||||+|+||++ +.++.++|+|||++...... .
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 79 FL-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI---DREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred cc-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCcEEEeecccccccCCCcc
Confidence 99 468999887765 68999999999999999999999999999999999999 66789999999998765322 2
Q ss_pred ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc-----------------
Q 008475 258 IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI----------------- 318 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~----------------- 318 (564)
......++..|+|||++.+ .++.++||||||+++|+|++|.+||...+.......+.+...
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 2233456889999998864 478899999999999999999999987765443333322100
Q ss_pred --------cCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 319 --------DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 319 --------~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.......+.++..+.++|.+||+.||.+|||+++++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00111234577899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=329.18 Aligned_cols=252 Identities=25% Similarity=0.349 Sum_probs=210.1
Q ss_pred cceeecccccccCCeEEEEEEEcc-----CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIA-----TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
+.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+. |+||+++++++.+..
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 82 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFN-HQNIVRLIGVSFERL 82 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCC
Confidence 458999999999999999999877 77889999886432 3344456888999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEee
Q 008475 174 CVHIVMELCAGGELFDRIIQRG-------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAID 246 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~D 246 (564)
..++||||++|++|.+++...+ .+++..+..++.||+.||.|||+++++||||||+||++..++....+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 9999999999999999987653 488999999999999999999999999999999999996544455799999
Q ss_pred CCCccccCCCCce---ecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCC
Q 008475 247 FGLSVFFKPGQIF---TDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFE 321 (564)
Q Consensus 247 fG~~~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~ 321 (564)
||++......... .....+..|+|||++. +.++.++|||||||++|+|++ |..||.+.+..+....+......
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-- 240 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL-- 240 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC--
Confidence 9999865332211 1222346799999987 459999999999999999997 99999988877777766543221
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 322 SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 322 ~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.....++..+.+++.+||+.+|++||++.+|++|
T Consensus 241 -~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 241 -DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred -CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1224578999999999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=344.86 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=215.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCc---E-EEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGI---E-FACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~-vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+...+.++||+|+||.||+|..+..+. . ||+|...............+.+|.++|+++. |||||++||+......
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~-H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN-HPNVVRFYGVAVLEEP 235 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCc
Confidence 445667899999999999999765432 3 8999887645557888999999999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
++||||+|+||+|.++|++++. ++..+...++.+.+.||+|||++++|||||-.+|+|+ ..++.+||+|||+++..
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~---~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY---SKKGVVKISDFGLSRAG 312 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee---cCCCeEEeCccccccCC
Confidence 9999999999999999999874 9999999999999999999999999999999999999 66677999999998865
Q ss_pred CCCCcee-cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 254 KPGQIFT-DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 254 ~~~~~~~-~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
..-.... ...-...|+|||.+. +.|+.++|||||||++||+++ |..||.+....++...|....+..+.+ ...+.
T Consensus 313 ~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~--~~~p~ 390 (474)
T KOG0194|consen 313 SQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP--SKTPK 390 (474)
T ss_pred cceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC--CCCHH
Confidence 4111111 112456899999998 569999999999999999999 899999999999999996554444433 35788
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++..++.+||..+|++||++.++.+
T Consensus 391 ~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 391 ELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHHHHHHHhccCChhhccCHHHHHH
Confidence 9999999999999999999998755
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=330.70 Aligned_cols=247 Identities=23% Similarity=0.382 Sum_probs=210.0
Q ss_pred cceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
+.|.+.+.||+|+||.||++... .++..+|+|.+... .......+.+|+.+++++. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCC
Confidence 45899999999999999999852 34567999988643 3445667899999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCC
Q 008475 174 CVHIVMELCAGGELFDRIIQRG-------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~ 240 (564)
.+++||||+++++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+|||+ ++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili---~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---ccCC
Confidence 9999999999999999987543 38999999999999999999999999999999999999 7778
Q ss_pred cEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHc
Q 008475 241 SLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLK 315 (564)
Q Consensus 241 ~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~ 315 (564)
.+||+|||++........ .....++..|+|||++.+ .++.++|||||||++|+|++ |..||......+....+..
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~ 237 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 237 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 999999999876533221 122345678999999874 58999999999999999998 9999998888888888877
Q ss_pred CCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 316 GHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 316 ~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+..... ...++.++.+|+.+||+.||.+|||+.+++.
T Consensus 238 ~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 238 GRVLQR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CCcCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 654322 2357899999999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-41 Score=363.68 Aligned_cols=252 Identities=28% Similarity=0.341 Sum_probs=205.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.++||+|+||.||+|.+..+++.||+|++...........+++.+|+++++.+. ||||+++++++.+.+..|+|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~-HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-HPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC-CcCcCeEEEEEeeCCEEEEE
Confidence 46999999999999999999999999999999997654434555678899999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 179 MELCAGGELFDRIIQR-----------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-----------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
|||++|++|.+++... ..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL---d~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL---GLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE---cCCCCEEEEec
Confidence 9999999999988641 234567788999999999999999999999999999999 77889999999
Q ss_pred CCccccCCCC-------------------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH
Q 008475 248 GLSVFFKPGQ-------------------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ 307 (564)
Q Consensus 248 G~~~~~~~~~-------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~ 307 (564)
|++....... .....+||+.|+|||++.+ .++.++|||||||++|||+||..||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9997652100 0112569999999999875 5899999999999999999999999876544
Q ss_pred HHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 308 GIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
......... ......+...+++.+.+++.+||..||++||+..+.+.
T Consensus 238 ki~~~~~i~-~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 238 KISYRDVIL-SPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred hhhhhhhcc-ChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 332221111 11111233468899999999999999999987666554
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=345.64 Aligned_cols=251 Identities=25% Similarity=0.351 Sum_probs=204.5
Q ss_pred cccceeecccccccCCeEEEEEEEccC-----CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIAT-----GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
-+++|+++++||+|+||.||+|.+... +..||||++.... .....+.+.+|+.+++++..||||+++++++.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 356799999999999999999986432 3479999986432 344456789999999999669999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhc---------------------------------------------------------
Q 008475 172 SLCVHIVMELCAGGELFDRIIQR--------------------------------------------------------- 194 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~--------------------------------------------------------- 194 (564)
....|||||||++|+|.+++.+.
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 99999999999999999888642
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeec
Q 008475 195 ---------------------------------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN 235 (564)
Q Consensus 195 ---------------------------------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~ 235 (564)
..+++..+..++.||+.||.|||+.+|+||||||+|||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill-- 270 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL-- 270 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE--
Confidence 136778889999999999999999999999999999999
Q ss_pred CCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHH-H
Q 008475 236 KDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQG-I 309 (564)
Q Consensus 236 ~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~-~ 309 (564)
+.++.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||....... .
T Consensus 271 -~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~ 349 (400)
T cd05105 271 -AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF 349 (400)
T ss_pred -eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH
Confidence 6677899999999876543221 122346678999999874 58999999999999999997 999998765433 3
Q ss_pred HHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 310 FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 310 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
...+..+ .... ....++.++.+++.+||..||++||++.+|.+
T Consensus 350 ~~~~~~~-~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 350 YNKIKSG-YRMA--KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHhcC-CCCC--CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 3444433 2222 22457899999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=311.38 Aligned_cols=249 Identities=28% Similarity=0.370 Sum_probs=206.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-----CC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-----SL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-----~~ 173 (564)
.+|++.+.||+|||+-||++++..++..||+|++... ..+..+..++|++.-+++. ||||++++++... ..
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf~-s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKFN-SPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhhC-CcchHHHHHHHHHhhccCce
Confidence 5799999999999999999999999999999998654 4567788999999999997 9999999887643 34
Q ss_pred eEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 174 CVHIVMELCAGGELFDRIIQR----GHYSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
..||++.|...|+|.+.+... ..+++.++..|+.+|+.||++||+.. ++||||||.|||+ .+.+.++|.||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl---s~~~~~vl~D~ 173 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL---SDSGLPVLMDL 173 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe---cCCCceEEEec
Confidence 599999999999999988642 36899999999999999999999999 9999999999999 56789999999
Q ss_pred CCccccCC----C------CceecccCCCcccchhhhh-h---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH--HHHH
Q 008475 248 GLSVFFKP----G------QIFTDVVGSPYYVAPEVLL-K---HYGPEADVWTAGVILYILLSGVPPFWAETQQ--GIFD 311 (564)
Q Consensus 248 G~~~~~~~----~------~~~~~~~gt~~y~aPE~~~-~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~--~~~~ 311 (564)
|.+....- . +....-..|..|+|||.+. + ..+.++|||||||+||.|+.|..||...-.. .+.-
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL 253 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL 253 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE
Confidence 99875421 0 0112234588999999997 2 3788999999999999999999999432211 1122
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 312 AVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 312 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
++..+.+.++... .+|+.+.+||+.||+.||.+||++.+++.+
T Consensus 254 Av~n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 254 AVQNAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred eeeccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 3455666666553 389999999999999999999999999875
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-41 Score=332.83 Aligned_cols=256 Identities=30% Similarity=0.534 Sum_probs=214.5
Q ss_pred eeecccccccCCeEEEEEEEc---cCCcEEEEEEeccccCC-CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLI-SREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
|++.+.||+|+||.||+|.+. .+|..||+|++...... .....+.+.+|+.+++.+.+|+||+++++.++.+..+|
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 788999999999999999975 47899999998654321 12334667889999999977999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+||||+++++|.+++.....+++..+..++.||+.||.|||+.|++||||+|+|||+ +.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---CCCCCEEEeeCccceecccc
Confidence 999999999999999888889999999999999999999999999999999999999 67789999999998765432
Q ss_pred C--ceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHcCCccCCCCCCCC
Q 008475 257 Q--IFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAET----QQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 257 ~--~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
. ......|+..|+|||.+.+ .++.++||||||+++|+|++|..||.... ...+...+......+ ...
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 234 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY----PQE 234 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC----Ccc
Confidence 2 2234568899999999863 46789999999999999999999996432 233444444433322 234
Q ss_pred CCHHHHHHHHHhcccCCCCCC-----CHHHHhcCCCcCCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERL-----TAHEVLCHPWICENG 363 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~-----s~~~vl~hp~~~~~~ 363 (564)
+++.+.+++.+||..||++|| ++++++.||||....
T Consensus 235 ~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 235 MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 789999999999999999997 899999999998754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=338.17 Aligned_cols=258 Identities=28% Similarity=0.435 Sum_probs=203.2
Q ss_pred ceeecccccccCCeEEEEEEEcc--CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--CeE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIA--TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--LCV 175 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~~ 175 (564)
+|.+.+.||+|+||.||+|.+.. ++..||+|.+...........+.+.+|+.+++.+. ||||+++++++.+. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK-HENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC-CCCccceEEEEeCCCCceE
Confidence 37889999999999999999988 89999999997643223334466788999999997 99999999999988 889
Q ss_pred EEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeec-CCCCCcEEEeeCCC
Q 008475 176 HIVMELCAGGELFDRIIQR-----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN-KDDDFSLKAIDFGL 249 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~-~~~~~~~kl~DfG~ 249 (564)
++||||+++ +|.+.+... ..+++..+..++.||+.||.|||+++|+||||||+||++.. ++..+.+||+|||+
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999999964 676666432 26899999999999999999999999999999999999932 11278999999999
Q ss_pred ccccCCCC----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH---------HHHHHH
Q 008475 250 SVFFKPGQ----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQG---------IFDAVL 314 (564)
Q Consensus 250 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~---------~~~~i~ 314 (564)
+....... ......+++.|+|||++.+ .++.++|||||||++|+|++|++||.+..... .+..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 88654322 1234567889999998874 47899999999999999999999997554321 111110
Q ss_pred cCC--------------c-------cCCCCCC------------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 315 KGH--------------I-------DFESDPW------------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 315 ~~~--------------~-------~~~~~~~------------~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
... . ....... ...+.++.++|.+||..||++|||+.++++||||
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000 0 0000011 1467789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-41 Score=340.25 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=203.4
Q ss_pred cccceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..++|++.+.||+|+||.||+|.+. .+++.||+|++.... .....+.+..|+.+++++.+||||+++++++..
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~ 82 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTK 82 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence 3467999999999999999999743 345789999986432 334456788999999999669999999998764
Q ss_pred -CCeEEEEEeccCCCchHHHHHhc--------------------------------------------------------
Q 008475 172 -SLCVHIVMELCAGGELFDRIIQR-------------------------------------------------------- 194 (564)
Q Consensus 172 -~~~~~lv~e~~~~~~L~~~l~~~-------------------------------------------------------- 194 (564)
+..++++|||+++++|.+++...
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 56789999999999999888542
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc---eecccCCC
Q 008475 195 -----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSP 266 (564)
Q Consensus 195 -----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~ 266 (564)
.++++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++........ .....++.
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill---~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE---eCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 257889999999999999999999999999999999999 6678899999999986533221 12244567
Q ss_pred cccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHH-HHHHcCCccCCCCCCCCCCHHHHHHHHHhcccC
Q 008475 267 YYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIF-DAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQ 343 (564)
Q Consensus 267 ~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~d 343 (564)
.|+|||++.+ .++.++|||||||++|||++ |..||.+....+.+ ..+..+... .. ...+++++.+++.+||+.+
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~l~~~cl~~~ 316 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM-RA--PEYATPEIYSIMLDCWHNN 316 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC-CC--CccCCHHHHHHHHHHccCC
Confidence 8999998874 59999999999999999998 99999875543333 333333221 11 2357889999999999999
Q ss_pred CCCCCCHHHHhcC
Q 008475 344 PSERLTAHEVLCH 356 (564)
Q Consensus 344 p~~R~s~~~vl~h 356 (564)
|++||++.++++|
T Consensus 317 p~~RPs~~ell~~ 329 (337)
T cd05054 317 PEDRPTFSELVEI 329 (337)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=339.06 Aligned_cols=264 Identities=27% Similarity=0.403 Sum_probs=214.6
Q ss_pred cccceee-cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHH-----------hHHHHHHHHHHHHhhcCCCCccE
Q 008475 97 IRDLYTL-GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE-----------DVEDVRREIQIMHHLAGHKNIVT 164 (564)
Q Consensus 97 ~~~~y~~-~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~~h~niv~ 164 (564)
+.++|.. .+.||.|+||.||+|.+..+++.||+|++......... ....+.+|+.+++.+. ||||++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~ 84 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK-HENIMG 84 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC-Ccceee
Confidence 4456754 57799999999999999999999999998654322100 0124678999999997 999999
Q ss_pred EEEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEE
Q 008475 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKA 244 (564)
Q Consensus 165 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl 244 (564)
+++++......++||||+. ++|.+++.....+++..+..++.||+.||.|||+.||+||||+|+||++ +.++.++|
T Consensus 85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill---~~~~~~kl 160 (335)
T PTZ00024 85 LVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI---NSKGICKI 160 (335)
T ss_pred eeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE---CCCCCEEE
Confidence 9999999999999999996 6899999887889999999999999999999999999999999999999 67789999
Q ss_pred eeCCCccccCCC---------------CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH
Q 008475 245 IDFGLSVFFKPG---------------QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQ 307 (564)
Q Consensus 245 ~DfG~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~ 307 (564)
+|||++...... .......+++.|+|||.+.+ .++.++|||||||++|+|++|.+||.+.+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999998765411 11223456788999999874 3789999999999999999999999988876
Q ss_pred HHHHHHHcCCccCCC------------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 308 GIFDAVLKGHIDFES------------------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 308 ~~~~~i~~~~~~~~~------------------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+.+..+......... ...+..+.++.++|.+||+.+|++|||++++|.||||....
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~ 320 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP 320 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence 665554331110000 00124578899999999999999999999999999999765
Q ss_pred CC
Q 008475 364 VA 365 (564)
Q Consensus 364 ~~ 365 (564)
..
T Consensus 321 ~~ 322 (335)
T PTZ00024 321 LP 322 (335)
T ss_pred CC
Confidence 43
|
|
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=331.79 Aligned_cols=254 Identities=28% Similarity=0.421 Sum_probs=202.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|.+..++..||+|++..... ......+.+|+.+++.+. |+||+++++++..+...|+|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcC-CCCEeEEEEEEecCCeEEEE
Confidence 459999999999999999999999999999999865432 222335678999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|||+. ++|.+.+.. ...+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI---SYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---cCCCcEEEeccccccccCCCC
Confidence 99995 677776654 3567889999999999999999999999999999999999 67789999999998754322
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHc--C------------Ccc
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQ-GIFDAVLK--G------------HID 319 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~-~~~~~i~~--~------------~~~ 319 (564)
.......+++.|+|||.+.+ .++.++|||||||++|+|++|..||...... +.+..+.. + ...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07870 158 QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPN 237 (291)
T ss_pred CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccc
Confidence 22234457889999999864 4788999999999999999999999765432 22222111 0 000
Q ss_pred CCCC------------CCC--CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 320 FESD------------PWP--LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 320 ~~~~------------~~~--~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+... .+. ..+..+.++|.+||..||.+|||+.+++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 238 YKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred ccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 0000 000 125789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=324.08 Aligned_cols=254 Identities=30% Similarity=0.472 Sum_probs=212.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEecccc--CCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--Ce
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRK--LISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--LC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~ 174 (564)
..|.+.+.||+|+||.||+|.+..++..||+|.+.... .........+.+|+.++++++ ||||+++++++.+. ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR-HDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC-CCCcceEEEEEEcCCCCE
Confidence 35899999999999999999999999999999875432 112345668899999999997 99999999998764 56
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+++++||+++++|.+++...+.+++..+..++.||+.||.|||+.|++|+||||+||++ +.++.++|+|||++....
T Consensus 81 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECccccccccc
Confidence 89999999999999999887789999999999999999999999999999999999999 677889999999987643
Q ss_pred CC----CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 255 PG----QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 255 ~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
.. .......++..|+|||.+.+ .++.++|+|||||++|+|++|+.||...........+..... .......++
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~p~~~~ 235 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPT--KPMLPDGVS 235 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCC--CCCCCcccC
Confidence 21 12234568899999999875 488999999999999999999999987766555544433221 122235688
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+.+.++|.+||. +|..||++.+++.|||.
T Consensus 236 ~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 236 DACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 999999999999 57999999999999995
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=332.13 Aligned_cols=255 Identities=27% Similarity=0.434 Sum_probs=215.9
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|...+.||+|+||.||+|++..++..||+|++.............+.+|+.+++.++ |||++++++++.+....|
T Consensus 19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 97 (313)
T cd06633 19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAW 97 (313)
T ss_pred HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEE
Confidence 3445777888999999999999999999999999997655445556677889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+||||+. ++|.+.+.. ..++++..+..++.||+.||.|||++||+||||+|+||++ +.++.+||+|||++.....
T Consensus 98 lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili---~~~~~~kL~dfg~~~~~~~ 173 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASKSSP 173 (313)
T ss_pred EEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE---CCCCCEEEeecCCCcccCC
Confidence 9999995 577777754 4568999999999999999999999999999999999999 6778899999999865332
Q ss_pred CCceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.....++..|+|||++. +.++.++|||||||++|+|++|..||...+.......+..... +......++..
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 248 (313)
T cd06633 174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLQSNEWTDS 248 (313)
T ss_pred ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCCccccCHH
Confidence 23457888999999984 3588899999999999999999999988776665555544322 22223457789
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+.+||.+||+.+|.+||++.+++.||||..
T Consensus 249 l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 249 FRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 999999999999999999999999999986
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=328.58 Aligned_cols=251 Identities=22% Similarity=0.329 Sum_probs=208.7
Q ss_pred cccceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.+. ||||+++++++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~ 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVSQ 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcC
Confidence 4567999999999999999999864 235679999885432 2334556889999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCc
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRG----------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS 241 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~ 241 (564)
....++||||+++++|.+++.... .++...+..++.|++.||.|||+.|++||||||+||++ ++++.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~---~~~~~ 157 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFT 157 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEE---cCCCC
Confidence 999999999999999999886532 35678899999999999999999999999999999999 67889
Q ss_pred EEEeeCCCccccCCCCce---ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcC
Q 008475 242 LKAIDFGLSVFFKPGQIF---TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKG 316 (564)
Q Consensus 242 ~kl~DfG~~~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~ 316 (564)
++|+|||++......... ....+++.|+|||++.+ .++.++|||||||++|||++ |..||.+.......+.+..+
T Consensus 158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~ 237 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG 237 (277)
T ss_pred EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998755432221 12345678999999874 58999999999999999999 78999888888877777665
Q ss_pred CccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 317 HIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 317 ~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.... ....+++.+.+++.+||+.||++|||+.+++++
T Consensus 238 ~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 238 GLLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CcCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 4322 224578899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=325.54 Aligned_cols=252 Identities=27% Similarity=0.498 Sum_probs=214.9
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|.+.+.||.|+||.||+|.+..++..||+|.+..... .....+.+.+|+.+++.++ ||||+++++.+......++|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMK-HPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCC-CCChhhhhheeccCCeEEEEE
Confidence 37889999999999999999999999999999876433 2234567889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCC-CcEEEeeCCCccccCCC
Q 008475 180 ELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD-FSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~-~~~kl~DfG~~~~~~~~ 256 (564)
||+++++|.+++.... .+++..+..++.|++.||.|||+.+++|+||||+||++ +++ ..+||+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFL---SKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---cCCCCeEEecccccchhccCC
Confidence 9999999999887643 47899999999999999999999999999999999999 444 45799999998765443
Q ss_pred C-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 Q-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
. ......|++.|+|||++.+ .++.++|+||||+++|+|++|..||...+..+....+..+.... ..+.++..+.+
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 232 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAP---ISPNFSRDLRS 232 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCC---CCCCCCHHHHH
Confidence 2 2233568889999998874 58899999999999999999999998877766666655544322 22357889999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+|.+||..+|++|||+.++++||||
T Consensus 233 ~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 233 LISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHhccChhhCcCHHHHhhCCCC
Confidence 9999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=322.76 Aligned_cols=252 Identities=29% Similarity=0.511 Sum_probs=220.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|.+.+.||.|+||.||+|.+..++..||+|++..... .......+.+|+++++.++ |||++++.+.+......++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEE
Confidence 37889999999999999999998999999999975443 3455677889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 180 ELCAGGELFDRIIQR----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 180 e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|++++++|.+++... ..+++..+..++.+++.||.|||++|++|+||+|+||++ +.++.++|+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~---~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL---TSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE---cCCCcEEECCccceeeccc
Confidence 999999999988764 679999999999999999999999999999999999999 6678999999999876544
Q ss_pred CC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 GQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.. ......+++.|+|||.+.+ .++.++|+||+|+++|+|++|..||......++...+........ ...++..+.
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 232 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPI---PSQYSSELR 232 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCC---CCCCCHHHH
Confidence 33 3334578889999998874 588999999999999999999999988887777777665543222 235789999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+++.+||..+|++||++.++|+||||
T Consensus 233 ~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 233 NLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=328.73 Aligned_cols=256 Identities=23% Similarity=0.317 Sum_probs=211.4
Q ss_pred ccceeecccccccCCeEEEEEEEcc-----CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIA-----TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
.++|++.+.||+|+||.||+|.++. .+..||+|.+.... .......+.+|+.+++.+. ||||+++++++.+.
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFT-CHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcCC
Confidence 4679999999999999999997542 34579999886433 2333456788999999997 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcE
Q 008475 173 LCVHIVMELCAGGELFDRIIQR----------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSL 242 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~ 242 (564)
...|+||||+++|+|.+++... ..++...+..++.||+.||.|||+++|+||||||+|||+ +.++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili---~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV---AHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEE---cCCCcE
Confidence 9999999999999999999653 234667889999999999999999999999999999999 677899
Q ss_pred EEeeCCCccccCCCCc---eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 008475 243 KAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317 (564)
Q Consensus 243 kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~ 317 (564)
+|+|||++........ .....++..|+|||.+. +.++.++|||||||++|||++ |..||.+....+....+..+.
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 238 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 238 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999875433221 11234467899999987 468999999999999999998 789998888877777776553
Q ss_pred ccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc------CCCcCCC
Q 008475 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC------HPWICEN 362 (564)
Q Consensus 318 ~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~------hp~~~~~ 362 (564)
.... ...+++.+.+++.+||+.||++|||+.++++ ||||...
T Consensus 239 ~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 239 YLDQ---PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred CCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 3211 2346789999999999999999999999987 9999764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=325.68 Aligned_cols=248 Identities=28% Similarity=0.433 Sum_probs=203.0
Q ss_pred cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
...||+|+||.||+|.+..++..||+|.+... .....+.+.+|+.+++.++ |+||+++++++..+...++|+||++
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 88 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLK-HRNIVQYLGSDSENGFFKIFMEQVP 88 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcC-CCCeeeeeeeeccCCEEEEEEecCC
Confidence 34799999999999999999999999988643 3445668899999999997 9999999999999999999999999
Q ss_pred CCchHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-Cce
Q 008475 184 GGELFDRIIQR-GHY--SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-QIF 259 (564)
Q Consensus 184 ~~~L~~~l~~~-~~~--~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~~~ 259 (564)
+++|.+++... ..+ ++..+..++.||+.||.|||++||+||||||+||++. ...+.++|+|||++...... ...
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~--~~~~~~~l~dfg~~~~~~~~~~~~ 166 (268)
T cd06624 89 GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN--TYSGVVKISDFGTSKRLAGINPCT 166 (268)
T ss_pred CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--CCCCeEEEecchhheecccCCCcc
Confidence 99999988764 445 8888999999999999999999999999999999993 22568999999998765332 222
Q ss_pred ecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQG-IFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
....+++.|+|||++.+ .++.++||||||+++|+|++|..||....... ....+. ...........+++++.+|
T Consensus 167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l 244 (268)
T cd06624 167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVG--MFKIHPEIPESLSAEAKNF 244 (268)
T ss_pred ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhh--hhccCCCCCcccCHHHHHH
Confidence 33467889999999863 37889999999999999999999997543221 111111 1111111224578999999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCc
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+.+||..+|.+|||+.+++.||||
T Consensus 245 i~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 245 ILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHcCCCchhCCCHHHHHhCCCC
Confidence 999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=330.41 Aligned_cols=256 Identities=27% Similarity=0.450 Sum_probs=217.6
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+...|...+.||+|+||.||+|++..++..||+|.+.............+.+|+++++.+. |||++++++++.++...+
T Consensus 23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 101 (317)
T cd06635 23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIEYKGCYLREHTAW 101 (317)
T ss_pred chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCeEE
Confidence 3344888899999999999999999999999999987654445556678889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+||||+.| +|.+.+.. ..++++..+..++.||+.||.|||++||+||||+|+||++ +.++.+||+|||++.....
T Consensus 102 lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~---~~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 102 LVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASP 177 (317)
T ss_pred EEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE---CCCCCEEEecCCCccccCC
Confidence 99999964 77776654 4568999999999999999999999999999999999999 6778999999999876443
Q ss_pred CCceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
. ....+++.|+|||.+. +.++.++|||||||++|+|++|..||...........+..+..... ....+++.
T Consensus 178 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 252 (317)
T cd06635 178 A---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL--QSNEWSDY 252 (317)
T ss_pred c---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCC--CCccccHH
Confidence 2 3456888999999874 3588899999999999999999999988777666666655433222 22457889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+.+||.+||+.+|.+||++.++++|||+...
T Consensus 253 l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 253 FRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred HHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 9999999999999999999999999999653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=337.25 Aligned_cols=261 Identities=28% Similarity=0.445 Sum_probs=214.0
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC--
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-- 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-- 173 (564)
.+.++|++.+.||+|+||.||+|.+..++..||+|++.... ........+.+|+.+++.+. ||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMK-HENVIGLLDVFTPDLSL 89 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCccceeeeecCCccc
Confidence 46678999999999999999999999999999999986432 23444567889999999997 999999999987653
Q ss_pred ----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 174 ----CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 174 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
.+++||||+ +++|..++. ...+++..+..++.||+.||.|||+.||+||||||+||++ +.++.++|+|||+
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill---~~~~~~kl~dfg~ 164 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGL 164 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeeccc
Confidence 468999999 778887765 4579999999999999999999999999999999999999 6778899999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC-------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF------- 320 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~------- 320 (564)
+...... .....+++.|+|||.+.+ .++.++|+|||||++|+|++|..||...+....+..+.+.....
T Consensus 165 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07880 165 ARQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK 242 (343)
T ss_pred ccccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 8765432 234567889999999874 48889999999999999999999998776554444332211100
Q ss_pred ----------------C----CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 321 ----------------E----SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 321 ----------------~----~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
. ...++.+++.+.++|.+||+.||.+|||+.++++||||......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 243 LQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred hcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence 0 01124578889999999999999999999999999999875443
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=330.94 Aligned_cols=253 Identities=28% Similarity=0.446 Sum_probs=210.7
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--CeEEEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--LCVHIV 178 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~~~lv 178 (564)
|++.+.||.|+||.||+|.+..+++.+|+|++.... ........+.+|+.+++.+. |||++++++++... ...++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEE
Confidence 677889999999999999999999999999997653 22334456788999999997 99999999999988 899999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||++ ++|.+++... ..+++..+..++.||+.||.|||+.|++|+||+|+||++ ++++.+||+|||++.......
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~---~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 79 FEYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred ecccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---cCCCCEEEccccceeeccCCC
Confidence 99996 4888888665 579999999999999999999999999999999999999 778899999999988765432
Q ss_pred --ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCC---------
Q 008475 258 --IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP--------- 324 (564)
Q Consensus 258 --~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~--------- 324 (564)
......++..|+|||.+.+ .++.++||||||+++|+|++|+.||...+.......+.+.........
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 2344566888999998764 478999999999999999999999988776665555443211111000
Q ss_pred -----------------CCC-CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 325 -----------------WPL-ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 325 -----------------~~~-~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
... +++.+.++|.+||..+|.+||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 011 38899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=331.15 Aligned_cols=250 Identities=23% Similarity=0.319 Sum_probs=207.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCc--EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGI--EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.|++.+.||+|+||.||+|.+..++. .+++|.+... ......+.+.+|+.++.++.+||||+++++++.....+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 458899999999999999999877765 4688877532 244456678899999999966999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCC
Q 008475 177 IVMELCAGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~ 240 (564)
+||||+++++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||+ +.++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV---GENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE---CCCC
Confidence 9999999999999986542 47889999999999999999999999999999999999 6778
Q ss_pred cEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCc
Q 008475 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHI 318 (564)
Q Consensus 241 ~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~ 318 (564)
.+||+|||++..............+..|+|||++.+ .++.++|||||||++|+|++ |..||......+....+..+..
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~ 236 (297)
T cd05089 157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 236 (297)
T ss_pred eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence 899999999864322111111223457999998874 58999999999999999997 9999998888887777765432
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 319 DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 319 ~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
. .....++..+.+||.+||..+|.+||+++++++.
T Consensus 237 ~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 237 M---EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1 1224588999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=322.82 Aligned_cols=245 Identities=39% Similarity=0.685 Sum_probs=216.7
Q ss_pred ccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCCc
Q 008475 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGE 186 (564)
Q Consensus 107 lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 186 (564)
||.|+||.||+|.+..+++.+|+|++.+...........+..|+.+++.+. ||||+++++.+..+...|+||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 699999999999998889999999998766555556778899999999997 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-CceecccCC
Q 008475 187 LFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-QIFTDVVGS 265 (564)
Q Consensus 187 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~~~~~~~gt 265 (564)
|.+++.....+++..+..++.|++.||.|||+.+++|+||+|+||++ +.++.++|+|||++...... .......++
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL---DADGHIKLTDFGLAKELSSEGSRTNTFCGT 156 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE---cCCCcEEEeecCcceecccCCCcccCCcCC
Confidence 99999888789999999999999999999999999999999999999 66788999999998775443 233456788
Q ss_pred Ccccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCC
Q 008475 266 PYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQP 344 (564)
Q Consensus 266 ~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp 344 (564)
..|+|||.+.+ .++.++|+||||+++|+|++|..||...........+......++ ..++..+.++|.+||..||
T Consensus 157 ~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~i~~~l~~~p 232 (250)
T cd05123 157 PEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EFLSPEARDLISGLLQKDP 232 (250)
T ss_pred ccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhcCCH
Confidence 89999999875 478899999999999999999999988877777777766443332 3468999999999999999
Q ss_pred CCCCCH---HHHhcCCCc
Q 008475 345 SERLTA---HEVLCHPWI 359 (564)
Q Consensus 345 ~~R~s~---~~vl~hp~~ 359 (564)
++||++ .++++||||
T Consensus 233 ~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 233 TKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred hhCCCcccHHHHHhCCCC
Confidence 999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=327.01 Aligned_cols=250 Identities=25% Similarity=0.465 Sum_probs=210.1
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||.|+||.||+|.+..++..||||.+.............+.+|+.+++.+. ||||+++++++..+...+++|
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc-CCchhhhhheeEeCCeEEEEE
Confidence 4888999999999999999999999999999887655444555678889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 180 ELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 180 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||+++++|.+++.. ...+++..++.++.||+.||.|||++|++|+||||+||++ +.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEECcchhhhcccc
Confidence 99999999988763 3458999999999999999999999999999999999999 6778999999999876543
Q ss_pred CC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ--QGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.. ......++..|+|||.+.+ .++.++||||||+++|+|++|..||.+... ......+.... ++..+...+++.
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 236 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLPSDHYSEE 236 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC--CCCCCcccccHH
Confidence 22 2234568899999999874 588899999999999999999999976543 23344443322 222233457899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhc
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+.++|.+||..||.+|||+.+|++
T Consensus 237 ~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 237 LRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHHHhcCCCcccCCCHHHHHH
Confidence 999999999999999999997764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=323.40 Aligned_cols=246 Identities=23% Similarity=0.341 Sum_probs=209.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
..|.+.+.||+|+||.||+|.+..++..||+|.+... ......+.+|+.+++.+. ||||+++++++..+..+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCC-CCChhheEEEEcCCCCcEEE
Confidence 3488899999999999999999999999999998643 223567889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 179 MELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
|||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ ++++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCcEEeCCCccccccccc
Confidence 9999999999988654 358899999999999999999999999999999999999 67789999999998876443
Q ss_pred Ccee--cccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 257 QIFT--DVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 257 ~~~~--~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.... ...++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+.+..+....+..+.. ......++.++
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 234 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR---MERPEGCPPKV 234 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC---CCCCCCCCHHH
Confidence 2211 1223567999998874 58899999999999999998 9999998888777777765422 22234578999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhc
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.++|.+||..||++||++.++++
T Consensus 235 ~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 235 YELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHHHHHHccCCcccCCCHHHHHH
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=363.60 Aligned_cols=149 Identities=26% Similarity=0.428 Sum_probs=138.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|.+.++||+|+||.||+|.+..+++.||||++.............+..|+.+++.++ ||||+++++++.....+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK-SPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC-CCCcCeEEEEEEECCEEEEE
Confidence 45999999999999999999999999999999998766556666778899999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
|||+.|++|.+++...+.+++..++.|+.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI---SNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE---cCCCCEEEEeCCCCc
Confidence 9999999999999888889999999999999999999999999999999999999 677899999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=338.92 Aligned_cols=260 Identities=29% Similarity=0.438 Sum_probs=209.1
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS---- 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---- 172 (564)
+..+|.+.+.||.|+||.||+|.+..++..||+|.+..... ...+.+.+|+++++.++ ||||+++++++...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~ 78 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDL 78 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcC-CCcchhhHhhhccccccc
Confidence 34679999999999999999999999999999999865432 34567889999999997 99999999876543
Q ss_pred ----------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcE
Q 008475 173 ----------LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSL 242 (564)
Q Consensus 173 ----------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~ 242 (564)
...|+||||++ ++|.+.+. .+.+++..++.++.||+.||.|||+.||+||||||+||++. ..++.+
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~--~~~~~~ 154 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-TDLANVLE-QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN--TEDLVL 154 (342)
T ss_pred ccccccccccceEEEEeeccc-ccHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--CCCceE
Confidence 35899999996 58887765 35699999999999999999999999999999999999994 245679
Q ss_pred EEeeCCCccccCCCC----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 008475 243 KAIDFGLSVFFKPGQ----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG 316 (564)
Q Consensus 243 kl~DfG~~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~ 316 (564)
||+|||++....... ......++..|+|||.+.+ .++.++|||||||++|+|++|+.||...+..+....+...
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 999999987653221 1123457889999998763 4888999999999999999999999877665544443322
Q ss_pred Ccc----------------------CCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 317 HID----------------------FES----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 317 ~~~----------------------~~~----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
... ... ...+.++.++.+||.+||..||.+|||+.++|.||||+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~ 308 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSC 308 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccC
Confidence 100 000 012357889999999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=328.08 Aligned_cols=260 Identities=34% Similarity=0.495 Sum_probs=220.7
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...+.|++.+.||+|+||.||+|.+..++..||+|++..... ....+..|+++++.+. |+||+++++.+......
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~ 90 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCK-HPNIVDYYDSYLVGDEL 90 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCC-CCCeeEEEEEEEECCEE
Confidence 345568899999999999999999988899999999865432 4567889999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|+|+||+++++|.+++...+ .++...+..++.|++.||.|||+.||+|+||+|+||++ +.++.++|+|||++....
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL---SKDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE---cCCCCEEECccchhhhhc
Confidence 99999999999999998876 89999999999999999999999999999999999999 677889999999887544
Q ss_pred CCC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 255 PGQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 255 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
... ......++..|+|||.+.+ .++.++|||||||++|+|++|..||...........+....... ......++..+
T Consensus 168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 246 (286)
T cd06614 168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPP-LKNPEKWSPEF 246 (286)
T ss_pred cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-CcchhhCCHHH
Confidence 321 2233457889999999874 48999999999999999999999998877665555554433221 11223478999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
.++|.+||+.+|.+||++.++++||||.+...
T Consensus 247 ~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 278 (286)
T cd06614 247 KDFLNKCLVKDPEKRPSAEELLQHPFLKKACP 278 (286)
T ss_pred HHHHHHHhccChhhCcCHHHHhhChHhhccCc
Confidence 99999999999999999999999999998543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=329.68 Aligned_cols=260 Identities=25% Similarity=0.316 Sum_probs=211.5
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|++.+.||+|+||.||+|.+..+++.||||.+.... .......+..|+.++..+.+||||+++++++.+....|
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~ 90 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF 90 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence 3456999999999999999999999889999999997543 22334556678887777767999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+||||+. ++|...+.. ...+++..+..++.||+.||.|||+ .||+||||+|+||++ ++++.+||+|||++....
T Consensus 91 ~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 91 ICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLV 166 (296)
T ss_pred EEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECccccchhcc
Confidence 9999984 567666654 4578999999999999999999997 699999999999999 677899999999987654
Q ss_pred CCCceecccCCCcccchhhhhh-----cCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCccCCCCCCCCC
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLK-----HYGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
.........++..|+|||.+.+ .++.++||||||+++|+|++|+.||..... .+.+..+....... .+....+
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 245 (296)
T cd06618 167 DSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPS-LPPNEGF 245 (296)
T ss_pred CCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCC-CCCCCCC
Confidence 4333344567889999999863 278899999999999999999999976332 34444444443221 1122247
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+.++.+||.+||..||.+||++.+++.||||....
T Consensus 246 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 246 SPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 89999999999999999999999999999998643
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=332.34 Aligned_cols=257 Identities=32% Similarity=0.487 Sum_probs=214.7
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|.+.+.||+|+||.||++.+..++..||+|.+.... ....+.+.+|+.+++.++ ||||+++++.+......|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~l 93 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENK-HPNIVNYLDSYLVGDELWV 93 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEE
Confidence 457999999999999999999998899999999985432 233467889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|+||+++++|.+++.. ..+++..+..++.|++.||.|||++|++||||+|+||++ +.++.++|+|||++.......
T Consensus 94 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili---~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred EEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE---cCCCCEEEccCcceecccccc
Confidence 9999999999998765 458899999999999999999999999999999999999 677889999999887654332
Q ss_pred -ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 258 -IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
......+++.|+|||.+. +.++.++|||||||++|+|++|+.||...+.......+..... ........++..+.++
T Consensus 170 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l 248 (293)
T cd06647 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIFRDF 248 (293)
T ss_pred cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC-CCCCCccccCHHHHHH
Confidence 223456888999999887 4588999999999999999999999987765443333322211 1112234578899999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
|.+||..+|.+||++.+++.||||....
T Consensus 249 i~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 249 LNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 9999999999999999999999998643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=318.72 Aligned_cols=250 Identities=34% Similarity=0.505 Sum_probs=214.4
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++.+.||+|++|.||+|.+..++..+++|++..... .....+.+|+.+++.+. ||||+++++++......++++|
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEEe
Confidence 7888999999999999999988999999999975432 35678889999999998 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce
Q 008475 181 LCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF 259 (564)
Q Consensus 181 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~ 259 (564)
|+++++|.+++... ..+++..+..++.|++.||.+||++|++||||+|+||++ +.++.++|+|||.+.........
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~ 154 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL---TSDGEVKLIDFGLSAQLSDTKAR 154 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEE---ccCCeEEEeeccccccccccccc
Confidence 99999999988775 579999999999999999999999999999999999999 66789999999999876654323
Q ss_pred ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 338 (564)
....++..|+|||.+.+ .++.++||||||+++|+|++|..||...+.......+....... ......++..+.++|.+
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~ 233 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPG-LRNPEKWSDEFKDFLKK 233 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCC-cCcccccCHHHHHHHHH
Confidence 45678899999999874 47889999999999999999999998876555444444322211 11112348899999999
Q ss_pred hcccCCCCCCCHHHHhcCCC
Q 008475 339 MLCSQPSERLTAHEVLCHPW 358 (564)
Q Consensus 339 ~l~~dp~~R~s~~~vl~hp~ 358 (564)
||..||++|||+.++++|||
T Consensus 234 ~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 234 CLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HccCChhhCCCHHHHhcCCC
Confidence 99999999999999999999
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=327.26 Aligned_cols=249 Identities=20% Similarity=0.332 Sum_probs=208.9
Q ss_pred cceeecccccccCCeEEEEEEEc----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+.|++.+.||+|+||.||+|... .++..||+|.+.... .......+.+|+.+++.++ ||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELH-HPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEecCCc
Confidence 34888999999999999999853 455789999986432 3455577889999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC
Q 008475 175 VHIVMELCAGGELFDRIIQR-----------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD 237 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~ 237 (564)
.|+||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili---~ 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI---G 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE---c
Confidence 99999999999999988532 237788999999999999999999999999999999999 6
Q ss_pred CCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 008475 238 DDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDA 312 (564)
Q Consensus 238 ~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~ 312 (564)
.++.+||+|||++....... ......++..|+|||.+. +.++.++|||||||++|||++ |..||.+.....+.+.
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 77889999999997654322 122344566799999987 458999999999999999998 9999988887777777
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 313 VLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 313 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+..+.... ....+++.+.+++.+||+.||.+||++.+|+++
T Consensus 239 ~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 239 VRKRQLLP---CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHcCCcCC---CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 66544321 234578999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=322.03 Aligned_cols=244 Identities=25% Similarity=0.374 Sum_probs=207.3
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|... .+..+|+|.+..... ....+.+|+.+++.+. ||||+++++++......++||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKLS-HPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHCC-CCCceeEEEEEccCCCEEEEE
Confidence 4888999999999999999875 456899998864332 2356788999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 180 ELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV---SSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE---cCCCeEEECCCCCccccCCCce
Confidence 999999999988753 468999999999999999999999999999999999999 6778999999999876543322
Q ss_pred ee--cccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 259 FT--DVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 259 ~~--~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
.. ...++..|+|||++.+ .++.++||||||+++|+|++ |+.||...+..+....+.++..... ....+..+.+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~ 232 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR---PKLASMTVYE 232 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC---CCCCCHHHHH
Confidence 21 2234567999999874 58999999999999999999 9999999888888888877653322 2346789999
Q ss_pred HHHHhcccCCCCCCCHHHHhc
Q 008475 335 LIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~ 355 (564)
++.+||..+|.+||++.++++
T Consensus 233 li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 233 VMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHHHHccCCcccCcCHHHHHH
Confidence 999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=335.64 Aligned_cols=262 Identities=24% Similarity=0.326 Sum_probs=205.6
Q ss_pred CCCcceeeecccccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCC
Q 008475 82 IDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161 (564)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n 161 (564)
...+++..+...|++|. -..+||+|+||.||+|... +|..||||++....... ...+.+|+.++.+++ |||
T Consensus 62 ~~~fs~~el~~AT~~Fs----~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~-H~N 132 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFS----ESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG---EREFLNEVEILSRLR-HPN 132 (361)
T ss_pred cceeeHHHHHHHHhCCc----hhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCC-CcC
Confidence 34455666666666544 4789999999999999964 45899999886543211 345999999999998 999
Q ss_pred ccEEEEEEecCC-eEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CEeecCCCCcEEeec
Q 008475 162 IVTIKGAYEDSL-CVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLG---VMHRDLKPENFLLVN 235 (564)
Q Consensus 162 iv~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~Dlkp~NIll~~ 235 (564)
+|+|+|+|.+.. ..+||+||+++|+|.++|.... +++|.....|+.+++.||+|||... ||||||||+|||+
T Consensus 133 lv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL-- 210 (361)
T KOG1187|consen 133 LVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL-- 210 (361)
T ss_pred cccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE--
Confidence 999999999988 5999999999999999998765 8999999999999999999999854 9999999999999
Q ss_pred CCCCCcEEEeeCCCccccCC-CCceecc-cCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCC---HHHH
Q 008475 236 KDDDFSLKAIDFGLSVFFKP-GQIFTDV-VGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAET---QQGI 309 (564)
Q Consensus 236 ~~~~~~~kl~DfG~~~~~~~-~~~~~~~-~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~---~~~~ 309 (564)
|+++.+||+|||+|+.... ....... .||.+|+|||++. +..+.++|||||||+|.||+||+.|..... ...+
T Consensus 211 -D~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l 289 (361)
T KOG1187|consen 211 -DEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSL 289 (361)
T ss_pred -CCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccH
Confidence 8999999999999976554 3333333 8999999999997 689999999999999999999998876432 1112
Q ss_pred HH----HHHcCCccCCCC-CC--CCCC--H---HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 310 FD----AVLKGHIDFESD-PW--PLIS--D---SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 310 ~~----~i~~~~~~~~~~-~~--~~~s--~---~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.. .+.++......+ .. ..++ . .+..+..+|++.+|..||++.+|+.
T Consensus 290 ~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 290 VEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 22 222322211111 11 2233 2 3556778999999999999999754
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=321.32 Aligned_cols=242 Identities=25% Similarity=0.347 Sum_probs=202.7
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+++++.+. ||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEcCCCCeEEEEeeccC
Confidence 36999999999999999999999999886432 3455677899999999997 99999999999999999999999999
Q ss_pred CchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCcee---
Q 008475 185 GELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT--- 260 (564)
Q Consensus 185 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~--- 260 (564)
++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..........
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV---TEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE---cCCCcEEECccccCcccccccccccCC
Confidence 99999987644 58999999999999999999999999999999999999 677789999999987644322111
Q ss_pred cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 008475 261 DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338 (564)
Q Consensus 261 ~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 338 (564)
....+..|+|||.+. +.++.++|||||||++|+|++ |..||...........+...... .....++..+.+|+.+
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~ 231 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL---PCPELCPDAVYRLMER 231 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC---CCcccCCHHHHHHHHH
Confidence 112245699999987 458999999999999999998 99999877776666666543221 1224578999999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 008475 339 MLCSQPSERLTAHEVLC 355 (564)
Q Consensus 339 ~l~~dp~~R~s~~~vl~ 355 (564)
||+.+|++|||+.++++
T Consensus 232 ~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 232 CWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HcCCChhhCcCHHHHHH
Confidence 99999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=328.73 Aligned_cols=256 Identities=28% Similarity=0.498 Sum_probs=215.6
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|....+||+|+||.||++....++..||+|++... .......+.+|+.+++.+. ||||+++++.+......++||
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 96 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVM 96 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcC-CcchhheeeEEEeCCEEEEEE
Confidence 345567899999999999999999999999988533 2334567889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-c
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-I 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-~ 258 (564)
||+++++|.+++. .+.+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.++|+|||++....... .
T Consensus 97 e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv---~~~~~~~l~dfg~~~~~~~~~~~ 172 (292)
T cd06657 97 EFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPR 172 (292)
T ss_pred ecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEcccccceeccccccc
Confidence 9999999988764 4568999999999999999999999999999999999999 677889999999886553321 2
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
.....+++.|+|||.+.+ .++.++|+||+|+++|+|++|..||.+.........+...... .......++..+.++|.
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~ 251 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-KLKNLHKVSPSLKGFLD 251 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCc-ccCCcccCCHHHHHHHH
Confidence 234568889999998864 5889999999999999999999999887776665555443221 12223457899999999
Q ss_pred HhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 338 KMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+||..+|.+||++.++++||||.....
T Consensus 252 ~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 252 RLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred HHHhCCcccCcCHHHHhcChHHhccCC
Confidence 999999999999999999999998764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=327.34 Aligned_cols=254 Identities=29% Similarity=0.458 Sum_probs=208.9
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc--CCCCccEEEEEEecCCe----
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA--GHKNIVTIKGAYEDSLC---- 174 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~~~~---- 174 (564)
|++.+.||+|+||.||+|++..++..||+|++..... .......+.+|+.++++++ +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6778899999999999999988899999999975432 2223345667888887775 49999999999988776
Q ss_pred -EEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 175 -VHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 175 -~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
++++|||+. ++|.+++.... .+++..+..++.||+.||.|||+.+++|+||+|+||++ +.++.+||+|||++.
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili---~~~~~~~l~dfg~~~ 155 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV---TSDGQVKIADFGLAR 155 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE---ccCCCEEEeccCcce
Confidence 999999996 58888886643 58999999999999999999999999999999999999 677899999999988
Q ss_pred ccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc-----cCC----
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI-----DFE---- 321 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-----~~~---- 321 (564)
............++..|+|||++.+ .++.++|||||||++|+|++|.+||......+.+..+..... .++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence 7654444445567889999999874 588999999999999999999999988887766665543110 000
Q ss_pred --------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 322 --------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 322 --------------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
....+.+++.+.++|.+||+.||.+||++.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 00012356788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=330.90 Aligned_cols=256 Identities=26% Similarity=0.433 Sum_probs=215.8
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
....|...+.||+|+||.||+|++..++..+|+|.+.............+.+|+++++.+. |+|++++++++......+
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 91 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAW 91 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCeeE
Confidence 3455888899999999999999999999999999987544434555667889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+||||+. |+|.+.+.. ...+++..+..++.|++.||.|||+.+++||||+|+||++ +.++.++|+|||++.....
T Consensus 92 lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 92 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE---CCCCcEEECCcccceeecC
Confidence 9999996 578776654 4568999999999999999999999999999999999999 6678999999999876543
Q ss_pred CCceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
. ....+++.|+|||.+. +.++.++|||||||++|+|++|..||...........+..+.... .....++..
T Consensus 168 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 242 (308)
T cd06634 168 A---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA--LQSGHWSEY 242 (308)
T ss_pred c---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCC--cCcccccHH
Confidence 2 3456788999999985 357889999999999999999999998776655555554443322 122357889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+.+||.+||..+|.+||++.++++|||+...
T Consensus 243 ~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 9999999999999999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=319.68 Aligned_cols=252 Identities=34% Similarity=0.524 Sum_probs=216.0
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--CeEEEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--LCVHIV 178 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~~~lv 178 (564)
|.+.+.||+|++|.||+|.+..++..|++|++..... .....+.+.+|+.+++++. ||||+++++.+... ..+++|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEEE
Confidence 7788999999999999999998999999999875543 2456778999999999997 99999999999988 899999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
+||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||++ +.++.++|+|||.+........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV---DSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEcccccEEecccccc
Confidence 9999999999999887789999999999999999999999999999999999999 6678999999999887665443
Q ss_pred ---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 259 ---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 259 ---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.....++..|+|||.+.+ .++.++||||||+++|+|++|..||.... .......+..+.. .......++..+.
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 234 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE--PPEIPEHLSEEAK 234 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCC--CcCCCcccCHHHH
Confidence 345678899999999875 48999999999999999999999997765 2223333322111 1122235689999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
++|.+||..+|.+||++.+++.||||
T Consensus 235 ~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 235 DFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 99999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-41 Score=339.46 Aligned_cols=262 Identities=31% Similarity=0.453 Sum_probs=219.2
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-----e
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-----C 174 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-----~ 174 (564)
+|++.+.||.|+||.||+|++..++..||+|++.... ......+.+.+|+.+++.+. ||||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLR-HENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcC-CcchhhhhhhhcccCcccccc
Confidence 4889999999999999999999899999999986532 23445567889999999997 999999999988765 7
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+|+||||++ ++|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.++|+|||++....
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili---~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV---NSNCDLKICDFGLARGVD 154 (330)
T ss_pred eEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccCceEeec
Confidence 899999996 5898988877789999999999999999999999999999999999999 677899999999998765
Q ss_pred CCC----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC------
Q 008475 255 PGQ----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES------ 322 (564)
Q Consensus 255 ~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~------ 322 (564)
... ......+++.|+|||.+.+ .++.++||||||+++|+|++|.+||.+.+..+.+..+.........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 432 2345667889999999874 4888999999999999999999999888776655555432111110
Q ss_pred ---------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCC
Q 008475 323 ---------------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPD 367 (564)
Q Consensus 323 ---------------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~ 367 (564)
...+.++..+.+||.+||+++|.+||++.+++.||||......+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~ 300 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPED 300 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccccc
Confidence 012346889999999999999999999999999999987554433
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=333.18 Aligned_cols=248 Identities=21% Similarity=0.298 Sum_probs=205.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcE----EEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIE----FACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..|++.+.||+|+||.||+|.+..++.. ||+|++.... .....+.+.+|+.+++.+. ||||+++++++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVD-NPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEcCC-C
Confidence 3489999999999999999998766654 8999886432 3445667889999999997 99999999998764 5
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++|+||+++|+|.+++... ..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill---~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe---cCCCcEEEccccccccc
Confidence 77999999999999999774 458899999999999999999999999999999999999 67788999999999876
Q ss_pred CCCCce---ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 254 KPGQIF---TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 254 ~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
...... ....++..|+|||.+.+ .++.++|||||||++|||++ |..||.+....++...+..+. ..+. .+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~ 236 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ--PPIC 236 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCC-CCCC--CCCC
Confidence 543321 12234567999999874 58999999999999999998 999998877666555444432 2222 2457
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+..+.+++.+||..+|.+||++.+++.+
T Consensus 237 ~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 237 TIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 8899999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=324.51 Aligned_cols=245 Identities=29% Similarity=0.424 Sum_probs=202.9
Q ss_pred eecccccccCCeEEEEEEEc----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 102 TLGRKLGQGQFGTTYLCTEI----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 102 ~~~~~lG~G~fg~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
++.+.||.|+||.||+|... ..+..|+||.+... ......+.+.+|++.+++++ ||||+++++++......++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~-h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLR-HPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHS-BTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccc-ccccccccccccccccccc
Confidence 35678999999999999987 45668999999542 24556788999999999995 9999999999998888999
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|||||++|+|.++|... ..+++..+..|+.||+.||.|||+++++|++|+|+||++ ++++.+||+|||++.....
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill---~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILL---DSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE---ETTTEEEEESTTTGEETTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccc
Confidence 99999999999999886 679999999999999999999999999999999999999 6778999999999987632
Q ss_pred CCce---ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 256 GQIF---TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 256 ~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.... ........|+|||.+.. .++.++||||||+++|||++ |+.||...+..++...+.++.... ....++.
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 232 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP---IPDNCPK 232 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT---SBTTSBH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce---eccchhH
Confidence 2221 22345678999999975 58999999999999999999 789999988888888886665432 2245789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+.++|.+||..||++|||+.++++
T Consensus 233 ~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 233 DIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHh
Confidence 9999999999999999999999874
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=320.82 Aligned_cols=241 Identities=24% Similarity=0.291 Sum_probs=203.1
Q ss_pred cccccCCeEEEEEEE--ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 106 KLGQGQFGTTYLCTE--IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 106 ~lG~G~fg~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
.||+|+||.||+|.+ ..++..+|+|++.... ......+.+..|+.+++.+. ||||+++++++. ....++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~-~~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLD-NPYIVRMIGICE-AESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCC-CCCcceEEEEEc-CCCcEEEEecCC
Confidence 589999999999964 4567899999986443 24455678899999999997 999999999875 456789999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce----
Q 008475 184 GGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF---- 259 (564)
Q Consensus 184 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~---- 259 (564)
+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL---VTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE---cCCCeEEECCCccccccCCCCCeeeec
Confidence 99999999888889999999999999999999999999999999999999 66788999999998765433211
Q ss_pred ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 260 TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
....++..|+|||.+.. .++.++|||||||++|||++ |..||......++.+.+.++... + ....+++++.++|.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~-~--~~~~~~~~l~~li~ 232 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM-E--CPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC-C--CCCCCCHHHHHHHH
Confidence 12233578999998874 58889999999999999998 99999888888888877765432 1 22458899999999
Q ss_pred HhcccCCCCCCCHHHHhc
Q 008475 338 KMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~ 355 (564)
+||+.||++||++.+|..
T Consensus 233 ~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 233 LCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHhccCchhCcCHHHHHH
Confidence 999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=328.20 Aligned_cols=251 Identities=23% Similarity=0.305 Sum_probs=209.2
Q ss_pred cceeecccccccCCeEEEEEEEccCC----------------cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCc
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATG----------------IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNI 162 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~----------------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni 162 (564)
.+|++.+.||+|+||.||+|.+...+ ..||+|.+.... .....+.+.+|+++++.++ ||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i 81 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLS-DPNI 81 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcC-CCCE
Confidence 46899999999999999999876543 468999987543 3455678899999999997 9999
Q ss_pred cEEEEEEecCCeEEEEEeccCCCchHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008475 163 VTIKGAYEDSLCVHIVMELCAGGELFDRIIQRG-----------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENF 231 (564)
Q Consensus 163 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NI 231 (564)
+++++++..+...++|||++++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999999999999987765 689999999999999999999999999999999999
Q ss_pred EeecCCCCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh--CCCCCCCCC
Q 008475 232 LLVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS--GVPPFWAET 305 (564)
Q Consensus 232 ll~~~~~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt--g~~pf~~~~ 305 (564)
++ +.++.++|+|||++....... ......+++.|+|||.+.+ .++.++|||||||++|+|++ |..||...+
T Consensus 162 li---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 162 LV---GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred ee---cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 99 677899999999987654332 1223456778999999874 69999999999999999998 788998777
Q ss_pred HHHHHHHHHcC----CccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 306 QQGIFDAVLKG----HIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 306 ~~~~~~~i~~~----~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
....+..+... ...........++.++.+++.+||+.||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 239 DQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred hHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 77666665432 111112223457899999999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-40 Score=318.31 Aligned_cols=252 Identities=31% Similarity=0.493 Sum_probs=217.8
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|++|.||+|.+..+++.||+|.+..... .....+.+.+|+++++++. |||++++++++.+....+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLK-HPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCC-CCCccEEEEEEEeCCEEEEEE
Confidence 37889999999999999999999999999999976543 3356678999999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc-
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI- 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~- 258 (564)
||+++++|.+++.....+++..+..++.|++.||.|||++||+||||+|+||++ +.++.++|+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT---TKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---CCCCCEEEeccccceecCCCccc
Confidence 999999999999888889999999999999999999999999999999999999 6678999999999987654332
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
.....++..|+|||.+.+ .++.++||||+|+++|+|++|..||...........+...... .....+++.+.++|.
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~ 232 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHP---PLPEGISPELKDFLM 232 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCC---CCCCCCCHHHHHHHH
Confidence 234567889999998874 4788999999999999999999999877655544444432221 122457899999999
Q ss_pred HhcccCCCCCCCHHHHhcCCCc
Q 008475 338 KMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+||..+|++||++.+++.||||
T Consensus 233 ~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 233 QCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHhCChhhCcCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=336.22 Aligned_cols=253 Identities=18% Similarity=0.250 Sum_probs=202.4
Q ss_pred cccccc--CCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEecc
Q 008475 105 RKLGQG--QFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELC 182 (564)
Q Consensus 105 ~~lG~G--~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 182 (564)
..||.| +||+||+|++..+|+.||+|++..... .....+.+.+|+.+++.+. ||||++++++|..+...++||||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFR-HPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCC-CCCcceEeeeEecCCceEEEEecc
Confidence 456666 999999999999999999999875433 3445678899999999997 999999999999999999999999
Q ss_pred CCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-c-
Q 008475 183 AGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-I- 258 (564)
Q Consensus 183 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-~- 258 (564)
.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.++++|||.+....... .
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill---~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILI---SGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---eCCCcEEEechHHHhhhhccCccc
Confidence 999999988764 358999999999999999999999999999999999999 667889999998643321110 0
Q ss_pred ------eecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC--------
Q 008475 259 ------FTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE-------- 321 (564)
Q Consensus 259 ------~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~-------- 321 (564)
.....++..|+|||++.+ .++.++|||||||++|+|++|..||...........+..+....+
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 001234567999999874 378899999999999999999999987665444433322211100
Q ss_pred -----------------------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 322 -----------------------------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 322 -----------------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.+....+++.+.+||.+||+.||++|||+.++|+||||...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 01112356789999999999999999999999999999753
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-42 Score=335.92 Aligned_cols=276 Identities=24% Similarity=0.366 Sum_probs=231.3
Q ss_pred hhccCCCcceeeecccccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc
Q 008475 78 MRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157 (564)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~ 157 (564)
+...|+....+......+.+..+|.+....|+|-|++|..|.+...|..||||+|.+. +...+.-+.|++||++|.
T Consensus 411 L~DNWdDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN----E~M~KtGl~EleiLkKL~ 486 (752)
T KOG0670|consen 411 LQDNWDDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN----EVMHKTGLKELEILKKLN 486 (752)
T ss_pred cccCcccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc----hHHhhhhhHHHHHHHHhh
Confidence 3445666666666677788889999999999999999999999999999999999864 445566678999999997
Q ss_pred C-----CCCccEEEEEEecCCeEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCC
Q 008475 158 G-----HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH---YSERKAAELTRIIVGVVEACHSLGVMHRDLKPE 229 (564)
Q Consensus 158 ~-----h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~ 229 (564)
. --|+++|+..|...+++|||+|.+ ..+|.+.|++.+. +....++.+++|+..||..|-..||+|.||||+
T Consensus 487 ~AD~Edk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPD 565 (752)
T KOG0670|consen 487 DADPEDKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPD 565 (752)
T ss_pred ccCchhhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCcc
Confidence 3 458999999999999999999998 6799999988653 788999999999999999999999999999999
Q ss_pred cEEeecCCCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH
Q 008475 230 NFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQG 308 (564)
Q Consensus 230 NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~ 308 (564)
||||+ .....+||||||.|.....++ .+++..+..|+|||++.| .|++..|+||.||+||||+||+..|.+.+...
T Consensus 566 NiLVN--E~k~iLKLCDfGSA~~~~ene-itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ 642 (752)
T KOG0670|consen 566 NILVN--ESKNILKLCDFGSASFASENE-ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQ 642 (752)
T ss_pred ceEec--cCcceeeeccCcccccccccc-ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHH
Confidence 99994 456789999999998876655 466777889999999997 59999999999999999999999999998888
Q ss_pred HHHHHHcCCccCCCCC-------------------------------------------------CCCCC-------HHH
Q 008475 309 IFDAVLKGHIDFESDP-------------------------------------------------WPLIS-------DSA 332 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~-------------------------------------------------~~~~s-------~~~ 332 (564)
++...+.-.-.++... .+.++ ..+
T Consensus 643 MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~ 722 (752)
T KOG0670|consen 643 MLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQL 722 (752)
T ss_pred HHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHH
Confidence 7765543111111000 00011 357
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.+||.+||..||++|.|+.|+|.||||.+
T Consensus 723 rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 723 RDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 89999999999999999999999999975
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=320.98 Aligned_cols=243 Identities=26% Similarity=0.385 Sum_probs=211.6
Q ss_pred ccccccCCeEEEEEEEccC---CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEec
Q 008475 105 RKLGQGQFGTTYLCTEIAT---GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMEL 181 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 181 (564)
+.||+|+||.||+|.+... +..||+|.+..... ....+.+.+|+.+++.++ |+||+++++++.....+++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc--hhHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEe
Confidence 4699999999999998866 88999999975542 225678899999999998 99999999999999999999999
Q ss_pred cCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 182 CAGGELFDRIIQR---------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 182 ~~~~~L~~~l~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
+++++|.+++... ..+++..+..++.|++.||.|||++||+||||+|+||++ +.++.+||+|||.+..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE---CCCCcEEEcccccccc
Confidence 9999999999875 779999999999999999999999999999999999999 7778999999999987
Q ss_pred cCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 253 FKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 253 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
..... ......++..|+|||.+.. .++.++|||||||++|+|++ |..||.........+.+..+... .....
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~ 231 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRL---PKPEY 231 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCcc
Confidence 65432 2334567889999999874 68999999999999999999 69999998888888887764322 22245
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
++.++.+++.+||..+|++|||+.+++++
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 232 CPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred CChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 78999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=329.95 Aligned_cols=251 Identities=25% Similarity=0.398 Sum_probs=208.7
Q ss_pred ccceeecccccccCCeEEEEEEEcc-------CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIA-------TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
.++|.+.+.||+|+||.||+|++.. +...+|+|.+.... .......+..|+.+++.+.+||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 4679999999999999999998643 23569999987532 34445678889999999966999999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEee
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV 234 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~ 234 (564)
.....|+||||+++++|.+++...+ .++...+..++.|++.||.|||++|++||||||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill- 173 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV- 173 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE-
Confidence 9999999999999999999997642 47889999999999999999999999999999999999
Q ss_pred cCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 008475 235 NKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGI 309 (564)
Q Consensus 235 ~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~ 309 (564)
+.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....++
T Consensus 174 --~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~ 251 (307)
T cd05098 174 --TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251 (307)
T ss_pred --cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 6778999999999876543221 112234568999999874 58999999999999999998 8999988887777
Q ss_pred HHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 310 FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 310 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
...+..+... .....++.++.+||.+||..+|.+||++.+++++
T Consensus 252 ~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 252 FKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHHcCCCC---CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 7776654321 2224578999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-40 Score=322.07 Aligned_cols=249 Identities=24% Similarity=0.367 Sum_probs=210.6
Q ss_pred cceeecccccccCCeEEEEEEEccC---CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIAT---GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+.|++.+.||+|+||.||+|.+..+ ...||+|.+.... .......+.+|+.+++.+. ||||+++++++......
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFD-HPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCC-CCCcceEeEEEecCCce
Confidence 4588999999999999999998654 4579999886543 3445567889999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++||||+++++|.+++... +.+++..+..++.|++.||.|||+++|+||||||+|||+ ++++.++|+|||++....
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCCEEECccchhhccc
Confidence 9999999999999998764 468999999999999999999999999999999999999 777899999999998764
Q ss_pred C-CCcee--cccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 255 P-GQIFT--DVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 255 ~-~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
. ..... ...++..|+|||.+.+ .++.++||||||+++|+|++ |..||...........+..+.... ....++
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~ 234 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP---PPMDCP 234 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCC
Confidence 2 11111 2234568999999874 58999999999999999998 999998888877777776653221 224578
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+.+.+|+.+||+.+|++||++.+++++
T Consensus 235 ~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 235 SALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=312.73 Aligned_cols=259 Identities=24% Similarity=0.267 Sum_probs=217.0
Q ss_pred cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
...||.|+||+|++..++.+|+..|||+|.... .....+++..|.+...+-.+.||||+++|..-.++..||.||+|
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n--~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM- 145 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN--IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM- 145 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeecc--chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-
Confidence 567999999999999999999999999997544 34566789999999888888999999999999999999999999
Q ss_pred CCchHHHH-----HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 184 GGELFDRI-----IQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 184 ~~~L~~~l-----~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
..+|..+. .++..++|+.+..|.--++.||+||-. .+|||||+||+|||+ +..|.+||||||++.....+-
T Consensus 146 d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv~Si 222 (361)
T KOG1006|consen 146 DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQLVDSI 222 (361)
T ss_pred hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhHHHHH
Confidence 45663322 235679999999999999999999964 689999999999999 889999999999987665544
Q ss_pred ceecccCCCcccchhhhh--h-cCCCcchHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCccCCCCCC--CCCCHH
Q 008475 258 IFTDVVGSPYYVAPEVLL--K-HYGPEADVWTAGVILYILLSGVPPFWAE-TQQGIFDAVLKGHIDFESDPW--PLISDS 331 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~--~-~~~~~~DvwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~--~~~s~~ 331 (564)
..+.-.|-..|||||.+. . .|+.+|||||||++|||+.||..||..- +..+.+..+..|..+...... -.++..
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~ 302 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFS 302 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHH
Confidence 445567889999999997 2 4999999999999999999999999653 345666667777655433222 247899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDR 368 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~ 368 (564)
+..+|.-||.+|...||.+.+++.+||+..+.+....
T Consensus 303 ~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~~~ 339 (361)
T KOG1006|consen 303 MVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEGPD 339 (361)
T ss_pred HHHHHHHHhhcccccCcchhhhhcCchhhhhhhcCCc
Confidence 9999999999999999999999999999987665443
|
|
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=326.36 Aligned_cols=248 Identities=19% Similarity=0.325 Sum_probs=209.8
Q ss_pred ceeecccccccCCeEEEEEEEccC-----CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIAT-----GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
.|.+.+.||+|+||.||+|.+..+ +..||+|++.... .....+.+..|+.++..+. ||||+++++++.....
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQ-HPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEcCCCc
Confidence 488899999999999999987543 5789999987442 3344567889999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC
Q 008475 175 VHIVMELCAGGELFDRIIQR----------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~ 238 (564)
.++++||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ ++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~---~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV---FD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe---cC
Confidence 99999999999999988532 247888899999999999999999999999999999999 66
Q ss_pred CCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 008475 239 DFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAV 313 (564)
Q Consensus 239 ~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i 313 (564)
++.+||+|||++........ .....+++.|+|||.+. +.++.++|||||||++|||++ |..||.+....+..+.+
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 77899999999876543221 12344577899999987 568999999999999999998 88999988888888888
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 314 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
..+..... ...++..+.+|+.+||+.+|.+||++++++..
T Consensus 240 ~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 240 RNRQVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HcCCcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 77654322 24588999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=333.55 Aligned_cols=259 Identities=29% Similarity=0.411 Sum_probs=209.7
Q ss_pred ceeecccccccCCeEEEEEEEccC--CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec----CC
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIAT--GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----SL 173 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----~~ 173 (564)
+|++.+.||+|+||.||+|.+..+ +..||+|++.... ......+.+.+|+.+++++.+||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 378899999999999999999888 8899999986432 2233456678899999999779999999987532 24
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.+|+++||+ +++|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili---~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV---NADCELKICDFGLARGF 155 (332)
T ss_pred cEEEEEecc-cCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE---cCCCCEEeCcCCCceec
Confidence 688999998 46899998888889999999999999999999999999999999999999 67789999999998765
Q ss_pred CCCC-----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc--------
Q 008475 254 KPGQ-----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI-------- 318 (564)
Q Consensus 254 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-------- 318 (564)
.... ......|++.|+|||++.+ .++.++||||+||++|+|++|.+||...+....+..+.....
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLS 235 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 4321 1234578999999998864 488999999999999999999999987665444433222100
Q ss_pred -------------------cCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 319 -------------------DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 319 -------------------~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.......+.++..+.+||.+||+.||.+|||+.+++.|||+.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~ 299 (332)
T cd07857 236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH 299 (332)
T ss_pred hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence 000112234688999999999999999999999999999997543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=324.13 Aligned_cols=249 Identities=23% Similarity=0.309 Sum_probs=209.4
Q ss_pred ccceeecccccccCCeEEEEEEEccCC-----cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATG-----IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
.++|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.+++.+. ||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~ 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVSTG 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCC-CCceeEEEEEEcCC
Confidence 456999999999999999999976443 789999986432 3344567889999999996 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcE
Q 008475 173 LCVHIVMELCAGGELFDRIIQRG----------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSL 242 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~ 242 (564)
...++||||+++++|.+++.... .+++..+..++.||+.||.|||+++|+||||||+|||+ +.++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill---~~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV---AEDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE---cCCCCE
Confidence 99999999999999999986532 36788999999999999999999999999999999999 778899
Q ss_pred EEeeCCCccccCCCCc---eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 008475 243 KAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317 (564)
Q Consensus 243 kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~ 317 (564)
||+|||++........ .....++..|+|||.+. +.++.++|||||||++|||++ |..||...+..+..+.+..+.
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~ 238 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG 238 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCC
Confidence 9999999876543321 22345677899999887 458999999999999999998 999999888888777776543
Q ss_pred ccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 318 ~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
... ....++..+.++|.+||+.+|++|||+.++++
T Consensus 239 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 239 HLD---LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred CCC---CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 221 12346899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=330.85 Aligned_cols=256 Identities=29% Similarity=0.493 Sum_probs=208.8
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC----
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL---- 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---- 173 (564)
.+.|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++ ||||+++++++.+..
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~-h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLN-HRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCC-CCCeeeeeheecCcchhhh
Confidence 4569999999999999999999999999999999865432 2223346778999999997 999999999987654
Q ss_pred ------eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEee
Q 008475 174 ------CVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAID 246 (564)
Q Consensus 174 ------~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~D 246 (564)
.+++|+||+++ +|...+... ..+++..+..++.||+.||.|||+.||+||||||+||++ ++++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEEeCc
Confidence 79999999975 676766543 468999999999999999999999999999999999999 7788999999
Q ss_pred CCCccccCCCC--ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC
Q 008475 247 FGLSVFFKPGQ--IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES 322 (564)
Q Consensus 247 fG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 322 (564)
||++....... ......++..|+|||.+.+ .++.++|||||||++|+|++|++||......+.+..+.+.......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCP 239 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 99987654322 2233456778999998864 4788999999999999999999999877766555544432110000
Q ss_pred --------------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 323 --------------------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 323 --------------------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
..+..++..+.++|.+||..||.+||++.+++.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 240 AVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 1123468999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=328.21 Aligned_cols=251 Identities=26% Similarity=0.408 Sum_probs=210.3
Q ss_pred ccceeecccccccCCeEEEEEEEccCC-----cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATG-----IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
.++|++.+.||+|+||.||++.+.... ..+|+|.+.... .......+.+|+.+++++.+||||+++++++..+
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 356899999999999999999976433 689999986542 3445567889999999995599999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC
Q 008475 173 LCVHIVMELCAGGELFDRIIQR----------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK 236 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~ 236 (564)
..+++||||+++++|..++... +.+++..+..++.||+.||.|||+++|+||||||+|||+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~--- 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV--- 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE---
Confidence 9999999999999999998642 358899999999999999999999999999999999999
Q ss_pred CCCCcEEEeeCCCccccCCCCce---ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 008475 237 DDDFSLKAIDFGLSVFFKPGQIF---TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFD 311 (564)
Q Consensus 237 ~~~~~~kl~DfG~~~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~ 311 (564)
+.++.+||+|||++......... ....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+...
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 245 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 245 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence 67789999999999875543221 12234567999998874 58999999999999999998 999999888877777
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 312 AVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 312 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+..+... . ....++..+.+|+.+||..||++|||+.+++++
T Consensus 246 ~~~~~~~~-~--~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 246 LLKEGYRM-E--KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHcCCcC-C--CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 77655322 1 223578999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=323.21 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=206.6
Q ss_pred eeecccccccCCeEEEEEEEccC---CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe---
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIAT---GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC--- 174 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~--- 174 (564)
|++.+.||+|+||.||+|....+ +..||+|.+..... .......+.+|+.+++.+. ||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFD-HPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCC-CCCeeeEEeeeccCCcccc
Confidence 56788999999999999997653 47899999875432 4455678899999999997 9999999998865443
Q ss_pred ---EEEEEeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEe
Q 008475 175 ---VHIVMELCAGGELFDRIIQR------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAI 245 (564)
Q Consensus 175 ---~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~ 245 (564)
.++||||+++++|..++... ..+++..+..++.|++.||.|||+.+|+||||||+||++ ++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE---CCCCeEEEC
Confidence 79999999999999888542 358999999999999999999999999999999999999 677899999
Q ss_pred eCCCccccCCCCce---ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccC
Q 008475 246 DFGLSVFFKPGQIF---TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDF 320 (564)
Q Consensus 246 DfG~~~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~ 320 (564)
|||++......... ....++..|+|||.+.+ .++.++|||||||++|||++ |..||.+....+.++.+..+....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK 235 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 99998865433221 11234568999999874 58999999999999999999 999998888888888777654322
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 321 ~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
....+++.+.+++.+||..||.+|||+.+++++
T Consensus 236 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 236 ---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 224578999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=300.80 Aligned_cols=253 Identities=27% Similarity=0.516 Sum_probs=212.9
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CCeE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SLCV 175 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~ 175 (564)
.+.|++.+++|.|.|+.||.|....+++.++||+++. ...+++++|+.||+.|++||||++++++..+ ....
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence 3569999999999999999999999999999999853 3457899999999999999999999999876 4567
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
.+|+||+++.+...+. ..++...++.++.+++.||.|||+.||+|||+||.|+++. .....++|+|+|+|.+..+
T Consensus 111 aLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecchHhhcCC
Confidence 8999999887765543 4688899999999999999999999999999999999994 3456799999999999999
Q ss_pred CCceecccCCCcccchhhhh--hcCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHH-------------cCCcc
Q 008475 256 GQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWA-ETQQGIFDAVL-------------KGHID 319 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~-------------~~~~~ 319 (564)
+..++-.+.+..|--||.+. +.|++.-|+|||||+|..|+..+.||.. .+..+.+-.|. +-.+.
T Consensus 186 ~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~ 265 (338)
T KOG0668|consen 186 GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID 265 (338)
T ss_pred CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence 99888899999999999997 5699999999999999999999999854 33333333221 11111
Q ss_pred CCC--------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 320 FES--------------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 320 ~~~--------------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.++ +.-..+++++.|||.++|..|..+|+|++|++.||||..
T Consensus 266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 266 LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 111 111235799999999999999999999999999999975
|
|
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=321.05 Aligned_cols=251 Identities=25% Similarity=0.463 Sum_probs=211.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|.+..+|+.||+|.+...........+.+.+|+++++++. |+||+++++.+......++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~-~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD-HPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCeeeeeeeeecCCeEEEE
Confidence 35899999999999999999999899999999987655445555678999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 179 MELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|||+++++|..++.. ...+++..+..++.+|+.||.|||+.||+||||+|+||++ +.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~---~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI---TATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE---CCCCcEEEeccceeeecc
Confidence 999999999988864 3458999999999999999999999999999999999999 677899999999987654
Q ss_pred CCC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET--QQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
... ......+++.|+|||.+.+ .++.++|||||||++|+|++|..||.... ..+..+.+..+... ..+...++.
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 235 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYP--PLPADHYSE 235 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCC--CCChhhcCH
Confidence 322 2234568889999999874 58999999999999999999999996543 23444554444322 222235788
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+.++|.+||..+|++|||+.+|++
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=327.62 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=206.6
Q ss_pred cccceeecccccccCCeEEEEEEE-----ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTE-----IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..++|.+.+.||+|+||.||+|.+ ..++..||+|.+.... .....+.+.+|+.+++++.+||||+++++++..
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 445699999999999999999975 3345689999886543 344456789999999999559999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
....++||||+++++|.+++.... .+++..+..++.|++.||.|||+++|+|+||||+|||+ +.++.++|+|||+
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~dfg~ 187 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL---THGKIVKICDFGL 187 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE---cCCCeEEECCCcc
Confidence 999999999999999999987643 38999999999999999999999999999999999999 6778899999999
Q ss_pred ccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCC
Q 008475 250 SVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDP 324 (564)
Q Consensus 250 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 324 (564)
+........ .....++..|+|||.+.+ .++.++||||+||++|+|++ |..||........+........... .
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~ 265 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA--Q 265 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC--C
Confidence 876543221 112345678999998874 58999999999999999998 9999987665544433333222222 2
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
....++++.+|+.+||..+|++|||+.+++.
T Consensus 266 ~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 266 PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 2356899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-40 Score=320.65 Aligned_cols=246 Identities=22% Similarity=0.345 Sum_probs=208.5
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|++.++||+|+||.||+|... ++..||+|.+.... ...+.+.+|+.+++.+. ||||+++++.+.+....++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 78 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPIYI 78 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCcEE
Confidence 356999999999999999999964 56789999876432 23567889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+|||+++++|.+++... ..+++..+..++.|++.||.|||+.+++||||||+||++ +.++.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIED 155 (261)
T ss_pred EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe---cCCCcEEECCCccceecCC
Confidence 99999999999988653 458889999999999999999999999999999999999 7778999999999987543
Q ss_pred CCc--eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQI--FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
... .....++..|+|||.+. +.++.++|||||||++|+|++ |..||...........+..+.. .+....++.+
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR---MPRMENCPDE 232 (261)
T ss_pred CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHH
Confidence 321 12234566899999987 458889999999999999998 9999998888777777765532 2223457899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhc
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+.+++.+||..+|++||+++++++
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 233 LYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHHHHHHHccCCcccCcCHHHHHH
Confidence 999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=335.66 Aligned_cols=261 Identities=26% Similarity=0.437 Sum_probs=211.9
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC---
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--- 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--- 172 (564)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+.+|+.++++++ ||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l~-h~~iv~~~~~~~~~~~~ 91 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 91 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-hhhHHHHHHHHHHHHHHHcC-CCcccceeeeeeecccc
Confidence 45678999999999999999999999999999999986532 13334566788999999997 99999999988643
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
...|++++++ +++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 92 ~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~dfg~ 166 (345)
T cd07877 92 EEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGL 166 (345)
T ss_pred cccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---cCCCCEEEecccc
Confidence 3478899987 7899876654 469999999999999999999999999999999999999 6778999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc---------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI--------- 318 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~--------- 318 (564)
+..... ......+++.|+|||++.+ .++.++|||||||++|+|++|+.||........+..+.+...
T Consensus 167 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T cd07877 167 ARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 244 (345)
T ss_pred cccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 876432 2344578899999998864 478899999999999999999999987665544443322110
Q ss_pred --------------cCCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 319 --------------DFES----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 319 --------------~~~~----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
..+. ......++++.+||.+||+.||.+||++.++++||||......
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~ 309 (345)
T cd07877 245 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 309 (345)
T ss_pred cccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCC
Confidence 0000 0112357889999999999999999999999999999975543
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-40 Score=319.58 Aligned_cols=246 Identities=24% Similarity=0.364 Sum_probs=207.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|.+.. +..+|+|.+..... ..+.+.+|+.+++.+. ||||+++++++.....+++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLS-HEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCC-CCCeeeEEEEEccCCCcEEE
Confidence 348899999999999999998653 45699998864332 2356889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||+++++|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||++ +.++.+||+|||.+.......
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV---DDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCCEEECCCccceecCCCc
Confidence 9999999999988764 468999999999999999999999999999999999999 677899999999987654332
Q ss_pred cee--cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 258 IFT--DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 258 ~~~--~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
... ...++..|+|||.+. +.++.++|||||||++|+|++ |..||......+....+..+...... ...+..+.
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP---HLASEKVY 231 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC---CCCCHHHH
Confidence 211 223456799999997 468999999999999999998 99999888877777777766443322 34689999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+++.+||+.+|.+||++.+++.+
T Consensus 232 ~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 232 AIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHcCCCcccCCCHHHHHHh
Confidence 99999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=328.25 Aligned_cols=252 Identities=24% Similarity=0.373 Sum_probs=209.3
Q ss_pred ccccceeecccccccCCeEEEEEEEcc-------CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIA-------TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGA 168 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 168 (564)
...++|.+.+.||+|+||.||+|++.. ....||+|.+.... .......+.+|+.+++.+.+||||++++++
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 344679999999999999999998632 34579999886432 344566788999999999669999999999
Q ss_pred EecCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008475 169 YEDSLCVHIVMELCAGGELFDRIIQR----------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFL 232 (564)
Q Consensus 169 ~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIl 232 (564)
+.....+|+||||+++++|.+++... ..++...+..++.||+.||.|||++||+||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 166 (314)
T cd05099 87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL 166 (314)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence 99999999999999999999999653 24788899999999999999999999999999999999
Q ss_pred eecCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH
Q 008475 233 LVNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQ 307 (564)
Q Consensus 233 l~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~ 307 (564)
+ +.++.+||+|||++........ .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+....
T Consensus 167 l---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 167 V---TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred E---cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9 6678899999999976543221 112234467999999874 58999999999999999999 89999888888
Q ss_pred HHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 308 GIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+....+..+... .....++.++.+||.+||..+|++|||+.++++
T Consensus 244 ~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 244 ELFKLLREGHRM---DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 888777665321 122457889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=322.28 Aligned_cols=248 Identities=22% Similarity=0.346 Sum_probs=205.3
Q ss_pred eeecccccccCCeEEEEEEEccCCc--EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec------C
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGI--EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED------S 172 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~------~ 172 (564)
|.++++||+|+||.||+|.+..++. .||+|.+.... ......+.+..|+.+++.++ ||||+++++++.. .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFD-HPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEccCCcccCC
Confidence 3467899999999999999877765 68999886543 24556778899999999997 9999999997643 2
Q ss_pred CeEEEEEeccCCCchHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEee
Q 008475 173 LCVHIVMELCAGGELFDRIIQ------RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAID 246 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~D 246 (564)
...++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++|+||||||+|||+ +.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEECC
Confidence 357899999999999887743 2347899999999999999999999999999999999999 6778999999
Q ss_pred CCCccccCCCCce---ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCC
Q 008475 247 FGLSVFFKPGQIF---TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFE 321 (564)
Q Consensus 247 fG~~~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~ 321 (564)
||++......... ....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+..+.+..+....
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~- 234 (272)
T cd05075 156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLK- 234 (272)
T ss_pred CCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC-
Confidence 9999876433221 12345678999999874 58999999999999999999 899998888888888777664322
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 322 SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 322 ~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
....++..+.++|.+||+.||++|||+.+++++
T Consensus 235 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 235 --QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 224578999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=319.32 Aligned_cols=251 Identities=29% Similarity=0.480 Sum_probs=218.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+|++.+.||+|+||.||++++..+++.+|+|.+..... .......+.+|+.+++.+. ||||+++++++.+....++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEe
Confidence 37889999999999999999999999999999875443 3445567788999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 180 ELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 180 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||++ +..+.+||+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~---~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILL---VANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---ecCCcEEEeeccchhhhcc
Confidence 99999999998866 3568999999999999999999999999999999999999 5677899999999987654
Q ss_pred CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
. ......+++.|+|||.+.+ .++.++|+||+|+++|+|++|+.||...+.......+..+...... ..++.++.+
T Consensus 156 ~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 231 (256)
T cd08530 156 N-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP---PIYSQDLQN 231 (256)
T ss_pred C-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc---hhhCHHHHH
Confidence 4 3334568889999999875 4888999999999999999999999988877777776655433221 357899999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+|.+||..+|++||++.++++||++
T Consensus 232 li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 232 FIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHcCCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999985
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=336.72 Aligned_cols=259 Identities=29% Similarity=0.453 Sum_probs=210.2
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC---
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--- 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--- 172 (564)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.+. ||||+++++++...
T Consensus 12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 89 (342)
T cd07879 12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQ-HENVIGLLDVFTSAVSG 89 (342)
T ss_pred ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcC-CCCccchhheecccccC
Confidence 345679999999999999999999999999999999865322 2333456789999999997 99999999998754
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
..+|+|+||+. .+|...+ ...+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 90 ~~~~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll---~~~~~~kL~dfg~ 163 (342)
T cd07879 90 DEFQDFYLVMPYMQ-TDLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV---NEDCELKILDFGL 163 (342)
T ss_pred CCCceEEEEecccc-cCHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCCC
Confidence 34699999995 4676554 3468999999999999999999999999999999999999 6788999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc---------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI--------- 318 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~--------- 318 (564)
+..... ......+++.|+|||.+.+ .++.++|||||||++|+|++|+.||.+.+....+..+.....
T Consensus 164 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 164 ARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CcCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 876432 2234567889999999864 488899999999999999999999988776554444332110
Q ss_pred --------------cCCCC----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 319 --------------DFESD----PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 319 --------------~~~~~----~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
..+.. .++.+++.+.+||.+||+.||.+||++.+++.||||.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 00000 12346788999999999999999999999999999987644
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=372.39 Aligned_cols=257 Identities=28% Similarity=0.426 Sum_probs=223.7
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.-+|.-...||.|.||.||.|.+..+|+..|+|.|.-.... ......+.+|+.++..+. |||+|+++|+-.....++
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~ln-HpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLN-HPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhcc-CccccccCceeecHHHHH
Confidence 344577788999999999999999999999999998755443 445667889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
|.||||+||+|.+.+...+..++.....+..|++.|+.|||++|||||||||+||++ +.+|.+|++|||.|..+.++
T Consensus 1311 IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeEecCc
Confidence 999999999999999887778888999999999999999999999999999999999 88889999999999877654
Q ss_pred C-----ceecccCCCcccchhhhhhc----CCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCccCCCCCCC
Q 008475 257 Q-----IFTDVVGSPYYVAPEVLLKH----YGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 257 ~-----~~~~~~gt~~y~aPE~~~~~----~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~ 326 (564)
. ......||+.|||||++.+. ...+.|||||||++.||+||+.||...+ ...+.-.+..|..+..+.
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~--- 1464 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPE--- 1464 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCch---
Confidence 2 23467899999999999853 5679999999999999999999997644 456666666666544332
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.+|.+..+||..||..||++|.++.|+|+|.|-+.
T Consensus 1465 ~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1465 RLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred hhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence 38999999999999999999999999999998764
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=326.93 Aligned_cols=253 Identities=31% Similarity=0.476 Sum_probs=209.6
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++.+.||.|+||.||+|....+++.||||.+..... . .......+|+..++++.+||||+++++++.++...++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY-S-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc-c-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 6778899999999999999988999999999865432 1 2223345799999999779999999999999999999999
Q ss_pred ccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 181 LCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|+ +++|.+.+.... .+++..+..++.|++.||.|||++|++|+||+|+||++ +.++.++|+|||++........
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCCEEEeecccceeccCCCC
Confidence 99 889999887764 78999999999999999999999999999999999999 7788999999999987665545
Q ss_pred eecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc-----------------
Q 008475 259 FTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID----------------- 319 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~----------------- 319 (564)
.....++..|+|||++.+ .++.++|+||||+++|+|++|++||......+....+......
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 556678899999998853 4789999999999999999999999877655444333211000
Q ss_pred --CC-------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 320 --FE-------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 320 --~~-------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.+ ....+..+..+.++|.+||..||++|||+.|++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00 00112346889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=321.97 Aligned_cols=247 Identities=21% Similarity=0.271 Sum_probs=206.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCc----EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGI----EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
++|++.++||+|+||+||+|++..++. .||+|++.... .......+.+|+.+++.+. ||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~-~~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVG-SPYVCRLLGICLT-ST 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcC-CCCCceEEEEEcC-CC
Confidence 458999999999999999999877776 48999886433 3445667889999999997 9999999998875 45
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++++||+++|+|.+.+... +.+++..+..++.||+.||.|||+++|+||||||+|||+ ++++.+||+|||++...
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~---~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV---KSPNHVKITDFGLARLL 159 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE---cCCCcEEECCCCceeec
Confidence 78999999999999998764 568999999999999999999999999999999999999 66778999999999876
Q ss_pred CCCCce---ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 254 KPGQIF---TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 254 ~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
...... ....+++.|+|||.+.+ .++.++|||||||++|||++ |..||.......+...+..+.... ....+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 236 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLP---QPPIC 236 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC---CCccC
Confidence 433221 12234568999999874 58999999999999999998 999998877777666665543221 22457
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+..+.+++.+||..||++||++.+++.
T Consensus 237 ~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 237 TIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 899999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=324.45 Aligned_cols=246 Identities=22% Similarity=0.368 Sum_probs=208.0
Q ss_pred ceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
.|.+.+.||+|+||.||+|++. .++..+++|.+... .....+.+.+|+.+++.+. ||||+++++++.....
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGDP 81 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCc
Confidence 4888999999999999999854 34556899987543 3344567889999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC
Q 008475 175 VHIVMELCAGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~ 238 (564)
.++||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||+ +.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~---~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV---GA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---cc
Confidence 999999999999999986542 37899999999999999999999999999999999999 67
Q ss_pred CCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 008475 239 DFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAV 313 (564)
Q Consensus 239 ~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i 313 (564)
++.++|+|||++........ .....++..|+|||.+.+ .++.++|||||||++|+|++ |..||......+..+.+
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 78999999999876543221 123456788999998874 58899999999999999999 99999888888777777
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 314 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
..+..... ...++..+.+++.+||..+|++||++.++++
T Consensus 239 ~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 239 TQGRVLER---PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred hCCCCCCC---CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 66554322 2347889999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=330.89 Aligned_cols=256 Identities=25% Similarity=0.378 Sum_probs=205.5
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec------
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED------ 171 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~------ 171 (564)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+++++.++ ||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNE-KDGFPITALREIKILKKLK-HPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccC-CCCcchhHHHHHHHHHhcC-CCCccchhhheeccccccc
Confidence 3569999999999999999999999999999999865432 1222345678999999997 9999999998754
Q ss_pred --CCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 172 --SLCVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 172 --~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
...+++||||+. ++|...+.. ...+++..+..++.||+.||.|||++||+||||||+||++ ++++.++|+|||
T Consensus 85 ~~~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg 160 (311)
T cd07866 85 RKRGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFG 160 (311)
T ss_pred ccCceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCc
Confidence 335799999995 467776654 3479999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCCC------------ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 008475 249 LSVFFKPGQ------------IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL 314 (564)
Q Consensus 249 ~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~ 314 (564)
++....... ..+...+++.|+|||.+.+ .++.++|||||||++|+|++|++||.+.+.......+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 987643221 1223456888999998864 47899999999999999999999998877765555443
Q ss_pred cCCccCCC--------------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 315 KGHIDFES--------------------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 315 ~~~~~~~~--------------------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
........ ..+..+++.+.++|.+||..||.+|||+.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 21110000 0012345788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=334.37 Aligned_cols=262 Identities=30% Similarity=0.447 Sum_probs=213.0
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CC
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SL 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~ 173 (564)
.+.++|++.+.||+|+||.||+|.+..++..+|+|++.... ........+.+|+.+++++.+||||+++++++.. ..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 45677999999999999999999998899999999886432 2333455677899999999449999999998864 34
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
..|+||||+. ++|.+++... .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLARSL 157 (337)
T ss_pred eEEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccchhcc
Confidence 6899999996 5898888665 78999999999999999999999999999999999999 78889999999998765
Q ss_pred CCCC------ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--------
Q 008475 254 KPGQ------IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH-------- 317 (564)
Q Consensus 254 ~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~-------- 317 (564)
.... ......++..|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 4321 2234568899999998763 47889999999999999999999998766544433332211
Q ss_pred -------------------ccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 318 -------------------IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 318 -------------------~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
........+.++.++.++|.+||+.||.+|||+.++++||||....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence 0111112234789999999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=319.95 Aligned_cols=243 Identities=24% Similarity=0.357 Sum_probs=200.5
Q ss_pred ccccccCCeEEEEEEEccCCc--EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEecc
Q 008475 105 RKLGQGQFGTTYLCTEIATGI--EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELC 182 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 182 (564)
+.||+|+||.||+|.+..++. .+|+|.+... ......+.+.+|+.+++++.+||||+++++++......++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 368999999999999888776 4688877532 234455678899999999966999999999999999999999999
Q ss_pred CCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEee
Q 008475 183 AGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAID 246 (564)
Q Consensus 183 ~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~D 246 (564)
++++|.+++.... .+++..+..++.|++.||+|||++|++||||||+|||+ +.++.+||+|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEECC
Confidence 9999999987543 37889999999999999999999999999999999999 7788999999
Q ss_pred CCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCC
Q 008475 247 FGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDP 324 (564)
Q Consensus 247 fG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 324 (564)
||++..............+..|+|||++.. .++.++|||||||++|+|++ |..||.+.+..+....+..+.. ...
T Consensus 156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~---~~~ 232 (270)
T cd05047 156 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR---LEK 232 (270)
T ss_pred CCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCC---CCC
Confidence 999864321111111233567999999874 58899999999999999997 9999988887777776655421 112
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
...++.++.+|+.+||..||.+|||+.+++.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 233 PLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 2347889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=329.83 Aligned_cols=255 Identities=21% Similarity=0.262 Sum_probs=201.0
Q ss_pred eecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEec
Q 008475 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMEL 181 (564)
Q Consensus 102 ~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 181 (564)
.+++.+|.| |.||+++...+++.||+|++..... .....+.+.+|+.+++.++ ||||+++++++......+++|||
T Consensus 5 ~i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~ 80 (314)
T cd08216 5 LIGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPL 80 (314)
T ss_pred hhhHhhcCC--ceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEec
Confidence 344444444 5566666667999999999976432 4556778999999999997 99999999999999999999999
Q ss_pred cCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 182 CAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 182 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
+++++|.+++... ..+++..+..++.||+.||.|||+++|+||||||+||++ +.++.+||+|||.+.......
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili---~~~~~~kl~d~~~~~~~~~~~~~ 157 (314)
T cd08216 81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL---SGDGKVVLSGLRYSVSMIKHGKR 157 (314)
T ss_pred cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEE---ecCCceEEecCccceeecccccc
Confidence 9999999988753 458999999999999999999999999999999999999 667899999999886543211
Q ss_pred ------ceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC--------
Q 008475 258 ------IFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF-------- 320 (564)
Q Consensus 258 ------~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~-------- 320 (564)
......++..|+|||++.+ .++.++||||+||++|+|++|..||..............+....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
T cd08216 158 QRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYP 237 (314)
T ss_pred ccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchh
Confidence 1233456778999999864 48899999999999999999999998765443322222211100
Q ss_pred ----------------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 321 ----------------------ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 321 ----------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.......++.++.+||.+||..||++|||++++|+||||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 0000112356789999999999999999999999999998543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=325.43 Aligned_cols=253 Identities=31% Similarity=0.489 Sum_probs=210.8
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++.+.||.|++|.||+|.+..+++.+|+|.+..... .......+..|+.+++.+. ||||+++++++.+....++|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEe
Confidence 5677899999999999999998999999999865432 3344567888999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-c
Q 008475 181 LCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-I 258 (564)
Q Consensus 181 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-~ 258 (564)
|+++ +|.+.+.. ...+++..+..++.||+.||.|||+++|+|+||||+||++ +.++.++|+|||.+....... .
T Consensus 79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE---CCCCcEEEeeeeeeEecCCCccc
Confidence 9965 88887766 3578999999999999999999999999999999999999 677899999999987765443 3
Q ss_pred eecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc-----------------
Q 008475 259 FTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID----------------- 319 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~----------------- 319 (564)
.....++..|+|||.+.+ .++.++||||||+++|+|++|+.||...+..+.+..+......
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 344567889999999874 5889999999999999999999999887765544443221100
Q ss_pred --CC-------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 320 --FE-------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 320 --~~-------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
++ ....+.++.++.++|.+||.+||.+||++.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 00 01123468899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=325.68 Aligned_cols=251 Identities=24% Similarity=0.389 Sum_probs=209.7
Q ss_pred ccceeecccccccCCeEEEEEEEc-------cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEI-------ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
.++|.+.+.||+|+||.||+|++. .++..||+|.+.... .......+.+|+.+++.+.+||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 466999999999999999999753 234579999886432 34456778999999999956999999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEee
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQR----------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV 234 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~ 234 (564)
.....|+||||+++++|.+++... ..++...+..++.||+.||.|||++||+||||||+|||+
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili- 170 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV- 170 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE-
Confidence 999999999999999999998764 236778899999999999999999999999999999999
Q ss_pred cCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 008475 235 NKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGI 309 (564)
Q Consensus 235 ~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~ 309 (564)
+.++.+||+|||++........ .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+.+..++
T Consensus 171 --~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 171 --TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred --cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 6778999999999986543221 222345678999999874 58999999999999999998 8899988888888
Q ss_pred HHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 310 FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 310 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
...+..+.... ....++.++.+||.+||..+|.+|||+.++++.
T Consensus 249 ~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 249 FKLLKEGHRMD---KPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHcCCcCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 88776554321 224578999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=320.77 Aligned_cols=247 Identities=23% Similarity=0.323 Sum_probs=204.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcE----EEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIE----FACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+.|++.+.||+|+||.||+|.+..++.. +++|.+... ........+..|+.+++++. ||||+++++++. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~-h~~iv~~~~~~~-~~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLD-HAYIVRLLGICP-GAS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCC-CCCcceEEEEEC-CCc
Confidence 4588899999999999999998777764 677766432 12344567788888999997 999999999875 456
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++++||+++|+|.+++... +.+++..+..++.||+.||.|||++|++||||||+|||+ +.++.+||+|||++...
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLL 159 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCccceec
Confidence 78899999999999999764 568999999999999999999999999999999999999 77889999999999765
Q ss_pred CCCC---ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 254 KPGQ---IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 254 ~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
.... ......++..|+|||.+. +.++.++|||||||++|||++ |..||.+.......+.+.++..... ...+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~ 236 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQ---PQIC 236 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC---CCCC
Confidence 4322 223345677899999987 469999999999999999998 9999988887776666665543322 2346
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+..+.+++.+||..||.+|||+.++++
T Consensus 237 ~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 237 TIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 788999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-40 Score=325.59 Aligned_cols=256 Identities=31% Similarity=0.508 Sum_probs=210.9
Q ss_pred eeecccccccCCeEEEEEEEc---cCCcEEEEEEeccccCCC-HHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLIS-REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
|++.+.||+|+||.||+|.+. .++..||+|++.+..... ....+.+..|+.++.++.+||||+++++.+..+...|
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 788999999999999999864 467889999987543211 2334567899999999977999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+||||+++++|.+.+.....+++..+..++.|++.||.|||+.+++||||+|+||++ +.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEEECccccccccc
Confidence 999999999999999887789999999999999999999999999999999999999 67788999999998765433
Q ss_pred Cc--eecccCCCcccchhhhhhc---CCCcchHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHcCCccCCCCCCCC
Q 008475 257 QI--FTDVVGSPYYVAPEVLLKH---YGPEADVWTAGVILYILLSGVPPFWAET----QQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 257 ~~--~~~~~gt~~y~aPE~~~~~---~~~~~DvwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
.. .....++..|+|||.+.+. .+.++||||||+++|+|++|..||.... ..++...+...... ....
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 234 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPP----FPKT 234 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCC----CCcc
Confidence 21 2234688999999998642 6889999999999999999999996432 22333333333222 2244
Q ss_pred CCHHHHHHHHHhcccCCCCCCC---HHHHhcCCCcCCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLT---AHEVLCHPWICENG 363 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s---~~~vl~hp~~~~~~ 363 (564)
++..+.++|.+||..||++||| +.++|+||||+...
T Consensus 235 ~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 235 MSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred cCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence 7889999999999999999998 56779999998754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=317.82 Aligned_cols=245 Identities=25% Similarity=0.379 Sum_probs=205.9
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||+|+||.||+|.+. ++..+|+|.+.+... ....+.+|+.+++.+. ||||+++++++......|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLS-HPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCceEEEE
Confidence 4888999999999999999975 466899999864332 2345778999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 180 ELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
||+++++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||++ +.++.+||+|||++........
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV---GEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE---CCCCcEEECCcccceecccccc
Confidence 999999999998764 468999999999999999999999999999999999999 6778999999999876543221
Q ss_pred ee--cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 259 FT--DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 259 ~~--~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
.. ...++..|+|||.+. ..++.++||||||+++|+|++ |..||......+....+..+... .....++.++.+
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 232 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL---YRPKLAPTEVYT 232 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC---CCCCCCCHHHHH
Confidence 11 122345799999987 468999999999999999999 89999888877777777655321 122457999999
Q ss_pred HHHHhcccCCCCCCCHHHHhcC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~h 356 (564)
++.+||..+|++|||+.++++.
T Consensus 233 li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 233 IMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHhcCChhhCcCHHHHHHH
Confidence 9999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=328.80 Aligned_cols=260 Identities=30% Similarity=0.466 Sum_probs=211.1
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-CCeE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-SLCV 175 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-~~~~ 175 (564)
+.++|++.+.||.|+||.||+|.+..++..||+|++.+... .....+.+..|+.+++.+. ||||+++.++|.. ....
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLR-HENIISLSDIFISPLEDI 85 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcC-CCCeeeEeeeEecCCCcE
Confidence 56779999999999999999999999999999998865332 2334566788999999997 9999999999875 5678
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|+||||+ +++|...+. ..++++..+..++.||+.||.|||++||+||||+|+||++ +.++.++|+|||++.....
T Consensus 86 ~lv~e~~-~~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 86 YFVTELL-GTDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQDP 160 (328)
T ss_pred EEEeehh-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCccccccccCC
Confidence 9999999 668877665 3568899999999999999999999999999999999999 7788999999999875432
Q ss_pred CCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------------
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG----------------- 316 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~----------------- 316 (564)
......+++.|+|||.+.+ .++.++|||||||++|+|++|..||...........+.+.
T Consensus 161 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd07856 161 --QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENT 238 (328)
T ss_pred --CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhh
Confidence 2234567889999998764 5899999999999999999999999876653322221110
Q ss_pred ----------CccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 317 ----------HIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 317 ----------~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
.........+.+++.+.++|.+||+.+|++||++.+++.||||......
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~ 297 (328)
T cd07856 239 LRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP 297 (328)
T ss_pred HHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence 0000001123578899999999999999999999999999999865544
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=336.46 Aligned_cols=252 Identities=24% Similarity=0.339 Sum_probs=204.5
Q ss_pred ccceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
.+.|.+.+.||+|+||.||+|++. .++..||+|++.... .....+.+.+|+.++.++..||||+++++++...
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 356888999999999999999964 345689999997543 2334557889999999996699999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcC---------------------------------------------------------
Q 008475 173 LCVHIVMELCAGGELFDRIIQRG--------------------------------------------------------- 195 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~~--------------------------------------------------------- 195 (564)
...++|||||++|+|.+++...+
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 99999999999999999986532
Q ss_pred -----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEee
Q 008475 196 -----------------------------------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV 234 (564)
Q Consensus 196 -----------------------------------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~ 234 (564)
.++...+..++.||+.||.|||+.+|+||||||+|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl- 272 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI- 272 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE-
Confidence 25667788899999999999999999999999999999
Q ss_pred cCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 008475 235 NKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGI 309 (564)
Q Consensus 235 ~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~ 309 (564)
++.+.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|||++ |..||......+.
T Consensus 273 --~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~ 350 (401)
T cd05107 273 --CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ 350 (401)
T ss_pred --eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH
Confidence 6678899999999976432211 123456788999999874 58899999999999999998 8999977655544
Q ss_pred HHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 310 FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 310 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
............ ....++.++.+||.+||..+|.+||++++|++.
T Consensus 351 ~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 351 FYNAIKRGYRMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 433333222222 224578999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=318.38 Aligned_cols=248 Identities=22% Similarity=0.374 Sum_probs=208.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCc---EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGI---EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
.+|++.+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+.+++.+. ||||+++++++..+...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcc
Confidence 458899999999999999999765443 79999886432 3445668899999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|+||||+++++|.+++... +.++...+..++.|++.||.|||++|++||||||+|||+ +.++.++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE---CCCCeEEeCCCCcccccc
Confidence 9999999999999998764 468999999999999999999999999999999999999 677899999999988654
Q ss_pred CCCc--e--ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 255 PGQI--F--TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 255 ~~~~--~--~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
.... . ....++..|+|||.+.+ .++.++|+|||||++|++++ |..||......+....+.++.. . +....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~ 234 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR-L--PAPMDC 234 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc-C--CCCCCC
Confidence 3221 1 11223467999999974 68999999999999999887 9999988887777777766532 2 222457
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++.+.+++.+||+.+|.+||++.++++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 235 PAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=351.20 Aligned_cols=256 Identities=32% Similarity=0.451 Sum_probs=210.3
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS---- 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---- 172 (564)
....|+.++.||+||||.||+|+++-+|..||||+|.-.. +.....++.+|+..|.+|. |||||+++..|.+.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLn-HpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLN-HPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcC-CcceeeeehhhhccCCcc
Confidence 4456888999999999999999999999999999997654 5666778999999999997 99999998544110
Q ss_pred --------------------------------------------------------------------------------
Q 008475 173 -------------------------------------------------------------------------------- 172 (564)
Q Consensus 173 -------------------------------------------------------------------------------- 172 (564)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred -----------------------------------CeEEEEEeccCCCchHHHHHhcCCC-CHHHHHHHHHHHHHHHHHH
Q 008475 173 -----------------------------------LCVHIVMELCAGGELFDRIIQRGHY-SERKAAELTRIIVGVVEAC 216 (564)
Q Consensus 173 -----------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~i~~qi~~~l~~l 216 (564)
..+||-||||+..+|.+.+..+... ....++.++++|+.||.|+
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH
Confidence 1368999999887777777665444 4788999999999999999
Q ss_pred HHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-------------------CCCceecccCCCcccchhhhhh-
Q 008475 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-------------------PGQIFTDVVGSPYYVAPEVLLK- 276 (564)
Q Consensus 217 H~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~- 276 (564)
|+.|||||||||.||++ +....|||+|||+|+... +....+..+||..|+|||++.+
T Consensus 714 H~~giIHRDLKP~NIFL---d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFL---DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhCceeeccCCcceeEE---cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 99999999999999999 788899999999998721 1124567899999999999973
Q ss_pred ---cCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q 008475 277 ---HYGPEADVWTAGVILYILLSGVPPFWA-ETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHE 352 (564)
Q Consensus 277 ---~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~ 352 (564)
.|+.|+|+|||||||+||+. ||.. .....++..+.++.++.+...+..--+.-..+|+.||++||.+||||.|
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~e 867 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATE 867 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHH
Confidence 59999999999999999986 6643 3345677777777777663333333356678999999999999999999
Q ss_pred HhcCCCcCC
Q 008475 353 VLCHPWICE 361 (564)
Q Consensus 353 vl~hp~~~~ 361 (564)
+|++.||-.
T Consensus 868 LL~s~llpp 876 (1351)
T KOG1035|consen 868 LLNSELLPP 876 (1351)
T ss_pred HhhccCCCc
Confidence 999999853
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=317.55 Aligned_cols=246 Identities=23% Similarity=0.306 Sum_probs=207.2
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|++.+.||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|+.+++++. ||||+++++++......|+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 78 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPIYI 78 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCC-CCCccceeEEEecCCCeee
Confidence 356999999999999999999964 456899999865432 2456888999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLV---GENNICKVADFGLARVIKE 155 (261)
T ss_pred eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEE---cCCCCEEECCcceEEEccC
Confidence 999999999999987654 68999999999999999999999999999999999999 6778899999999987653
Q ss_pred CCce--ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQIF--TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.... .....+..|+|||.+.+ .++.++||||||+++|+|++ |+.||.+.........+..... . .....++..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~ 232 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR-M--PCPPGCPKE 232 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-C--CCCCcCCHH
Confidence 2211 11222357999998874 58999999999999999999 9999998888777777765432 1 122457899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhc
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+.+++.+||+.+|.+||++.+++.
T Consensus 233 ~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 233 LYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHHhhcCcccCCCHHHHHH
Confidence 999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=321.19 Aligned_cols=247 Identities=21% Similarity=0.344 Sum_probs=207.4
Q ss_pred cceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
.+|.+.++||+|+||.||+|... .++..+|+|.+... .......+.+|+++++.+. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQ-HQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCC-CCCCceEEEEEecCC
Confidence 34788999999999999999742 35668999987643 3455678899999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC
Q 008475 174 CVHIVMELCAGGELFDRIIQRG---------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~ 238 (564)
..+++|||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ ++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~---~~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLV---GQ 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEE---cC
Confidence 9999999999999999987643 47889999999999999999999999999999999999 67
Q ss_pred CCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 008475 239 DFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAV 313 (564)
Q Consensus 239 ~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i 313 (564)
++.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |.+||......+....+
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 78999999999875543221 112334678999998874 58999999999999999998 99999888877777777
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 314 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
..+.... ....+++.+.+||.+||+.||.+||++.+|++
T Consensus 238 ~~~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 238 TQGRELE---RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HcCccCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 6654321 22357899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=310.02 Aligned_cols=259 Identities=27% Similarity=0.437 Sum_probs=212.2
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--------
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-------- 171 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-------- 171 (564)
.|+...+||+|.||.||+|+.+.+|+.||+|++-....... .-....+|+++|..|+ |+|++.++++|..
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeG-fpitalreikiL~~lk-Henv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEG-FPITALREIKILQLLK-HENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccC-CcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCcccc
Confidence 47778899999999999999999999999997654221111 1234568999999998 9999999887743
Q ss_pred CCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 172 SLCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
...+|+||.+|+. +|..+|... -+++..++..++.+++.||.|+|+..|+|||+||+|+|+ +.++.+||+|||++
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklADFGla 171 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLADFGLA 171 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEeeccccc
Confidence 3459999999954 788877554 579999999999999999999999999999999999999 88899999999999
Q ss_pred cccCC-----CCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC
Q 008475 251 VFFKP-----GQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD 323 (564)
Q Consensus 251 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 323 (564)
+.+.. ...++..+.|.+|++||.+.+ .|+++.|||..|||+.||.||.+.+.+.+....+..|..-.-.+..+
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 65532 224566778999999999985 59999999999999999999999999999888777765422222222
Q ss_pred CCCC-------------------------------CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 324 PWPL-------------------------------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 324 ~~~~-------------------------------~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
.|+. -++++.+|+.+||..||.+|+.++++|+|.||.....
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~ 323 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM 323 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence 2221 1357889999999999999999999999999987543
|
|
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=322.14 Aligned_cols=246 Identities=21% Similarity=0.322 Sum_probs=204.9
Q ss_pred eeecccccccCCeEEEEEEEcc-----CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIA-----TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
|++.+.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|+.+++.+. ||||+++++.+......
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVN-HPHVIKLYGACSQDGPL 78 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCCc
Confidence 7788999999999999998653 23578999886433 3445677889999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008475 176 HIVMELCAGGELFDRIIQR------------------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENF 231 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~------------------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NI 231 (564)
+++|||+.+++|.+++... ..+++..+..++.|++.||.|||+++|+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999987642 2477889999999999999999999999999999999
Q ss_pred EeecCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q 008475 232 LLVNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQ 306 (564)
Q Consensus 232 ll~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~ 306 (564)
|+ ++++.+||+|||++........ .....++..|+|||.+.+ .++.++||||||+++|+|++ |..||.+..+
T Consensus 159 ll---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 159 LV---AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred EE---cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99 6678999999999876532221 122345678999998874 58999999999999999998 9999988888
Q ss_pred HHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 307 QGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 307 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
..+.+.+..+.. . .....++.++.+++.+||+.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~-~--~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 236 ERLFNLLKTGYR-M--ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHHhCCCC-C--CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 877776655422 2 223457899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=329.08 Aligned_cols=252 Identities=25% Similarity=0.390 Sum_probs=208.9
Q ss_pred cccceeecccccccCCeEEEEEEEccC-------CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIAT-------GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
...+|++++.||+|+||.||+|.+... +..||+|.+.... .....+.+.+|+.+++++.+||||+++++++
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 345699999999999999999986432 2368999886432 3445678899999999995699999999999
Q ss_pred ecCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEe
Q 008475 170 EDSLCVHIVMELCAGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLL 233 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll 233 (564)
......+++|||+++|+|.+++.... .++...+..++.||+.||.|||++||+||||||+|||+
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill 167 (334)
T cd05100 88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV 167 (334)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE
Confidence 99999999999999999999987532 36778889999999999999999999999999999999
Q ss_pred ecCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 008475 234 VNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQG 308 (564)
Q Consensus 234 ~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~ 308 (564)
+.++.+||+|||+++....... .....++..|+|||++.+ .++.++|||||||++|||++ |..||.+.+..+
T Consensus 168 ---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 168 ---TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred ---cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 6678899999999876543221 122334567999999875 58999999999999999998 899999888888
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
....+..+... .....++.++.+||.+||+.+|.+||++.+++++
T Consensus 245 ~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 245 LFKLLKEGHRM---DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 87777655322 1223578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=331.91 Aligned_cols=251 Identities=24% Similarity=0.349 Sum_probs=201.8
Q ss_pred ccceeecccccccCCeEEEEEEE-----ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTE-----IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED- 171 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~- 171 (564)
.++|++.+.||+|+||.||+|.+ ..+++.||||++.... .......+.+|+.++.++.+||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 46799999999999999999984 3567899999996543 334456788999999999769999999998764
Q ss_pred CCeEEEEEeccCCCchHHHHHhc---------------------------------------------------------
Q 008475 172 SLCVHIVMELCAGGELFDRIIQR--------------------------------------------------------- 194 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~--------------------------------------------------------- 194 (564)
+..+++|||||++|+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 45689999999999999988643
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc---eec
Q 008475 195 ----------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI---FTD 261 (564)
Q Consensus 195 ----------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~---~~~ 261 (564)
..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++........ ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE---cCCCcEEEEecccccccccCcchhhcCC
Confidence 135777888999999999999999999999999999999 6778999999999876432211 112
Q ss_pred ccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH-HHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 008475 262 VVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQ-GIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338 (564)
Q Consensus 262 ~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 338 (564)
..++..|+|||.+.+ .++.++|||||||++|+|++ |..||...... .....+..+... .. ...+++++.+++.+
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~ 317 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-RA--PDYTTPEMYQTMLD 317 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC-CC--CCCCCHHHHHHHHH
Confidence 334567999998874 58999999999999999997 99999765433 333444443322 11 12467899999999
Q ss_pred hcccCCCCCCCHHHHhcC
Q 008475 339 MLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 339 ~l~~dp~~R~s~~~vl~h 356 (564)
||+.||++|||+.++++|
T Consensus 318 cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 318 CWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HccCChhhCcCHHHHHHH
Confidence 999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=318.57 Aligned_cols=247 Identities=21% Similarity=0.341 Sum_probs=210.3
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
...|++.++||.|+||.||+|.+.. +..+|+|.+.... ......+..|+.+++.++ ||||+++++++......++
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l 79 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRLR-HKHLISLFAVCSVGEPVYI 79 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcCC-CcchhheeeeEecCCCeEE
Confidence 3459999999999999999999877 8899999986542 334567889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||.+.....
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv---~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILV---GEDLVCKVADFGLARLIKE 156 (261)
T ss_pred EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEE---cCCceEEEccccchhhcCC
Confidence 99999999999998753 458999999999999999999999999999999999999 6778999999999876543
Q ss_pred CCc-eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 256 GQI-FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 256 ~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
... .....++..|+|||.+.+ .++.++||||||+++|+|++ |..||...+..+.+..+..+... +....+++.+
T Consensus 157 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 233 (261)
T cd05148 157 DVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM---PCPAKCPQEI 233 (261)
T ss_pred ccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC---CCCCCCCHHH
Confidence 221 122345668999999874 58899999999999999998 89999888887787777654221 2224678999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhc
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.++|.+||..||.+|||+.++++
T Consensus 234 ~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 234 YKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHHHHcCCCchhCcCHHHHHH
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=323.60 Aligned_cols=253 Identities=30% Similarity=0.490 Sum_probs=211.1
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+..|+.+++.+. ||||+++++++.+....++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEec
Confidence 566788999999999999999999999999997653 22334466778999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-c
Q 008475 181 LCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-I 258 (564)
Q Consensus 181 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-~ 258 (564)
|++ ++|.+++... ..+++..+..++.|++.||.|||++||+||||+|+||++ ++++.++|+|||++....... .
T Consensus 79 ~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 79 YCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI---NRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred CcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE---cCCCCEEEecCCcccccCCCccc
Confidence 996 5899999876 579999999999999999999999999999999999999 678899999999987654332 3
Q ss_pred eecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc------------------
Q 008475 259 FTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI------------------ 318 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~------------------ 318 (564)
.....++..|+|||.+.+ .++.++|||||||++|+|++|.+||...+..+.+..+.+...
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 334556788999999863 588999999999999999999999988776655544432100
Q ss_pred cCC-------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 319 DFE-------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 319 ~~~-------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.++ ....+.++..+.++|.+||..||++||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 000 01123457899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=318.05 Aligned_cols=247 Identities=22% Similarity=0.386 Sum_probs=208.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCc---EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGI---EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
.|++.+.||+|+||.||+|.+..++. .||+|.+.... .......+..|+.+++.+. ||||+++++++..+...+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CcCcceEEEEECCCCceE
Confidence 48899999999999999999877665 59999986532 4555678999999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+||||+++++|.+++... +.+++..++.++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCcccccccc
Confidence 999999999999988753 568999999999999999999999999999999999999 6778999999999876543
Q ss_pred CCc---eeccc---CCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 256 GQI---FTDVV---GSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 256 ~~~---~~~~~---gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
... ..... .+..|+|||.+. +.++.++|||||||++|||++ |..||......+....+.... . .+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~-~--~~~~~~ 235 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY-R--LPPPMD 235 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-c--CCCccc
Confidence 221 11111 134799999987 458999999999999999886 999999888877777775432 2 222345
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++..+.+++.+||..+|.+||++.+|+.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 236 CPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 7899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=323.17 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=203.5
Q ss_pred cceeecccccccCCeEEEEEEEccC--------------CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIAT--------------GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~--------------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~ 164 (564)
.+|++.+.||+|+||.||+|.+..+ ...||+|.+.... .......+.+|++++++++ ||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLK-NPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCC-CCCcCe
Confidence 5699999999999999999987543 2358999986432 3445667899999999997 999999
Q ss_pred EEEEEecCCeEEEEEeccCCCchHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008475 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRG------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFL 232 (564)
Q Consensus 165 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIl 232 (564)
+++++......++||||+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999999886532 3678889999999999999999999999999999999
Q ss_pred eecCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh--CCCCCCCCCH
Q 008475 233 LVNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS--GVPPFWAETQ 306 (564)
Q Consensus 233 l~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt--g~~pf~~~~~ 306 (564)
+ +.++.+||+|||++........ .....++..|+|||++. +.++.++|||||||++|+|++ |..||.....
T Consensus 162 l---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 162 V---GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred E---cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 9 6677899999999876543221 12234467899999887 468999999999999999988 6789988776
Q ss_pred HHHHHHHHc-----CCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 307 QGIFDAVLK-----GHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 307 ~~~~~~i~~-----~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+....+.+ +...+ ....+.+++.+.+|+.+||..||++|||+.+|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 239 EQVIENTGEFFRNQGRQIY-LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHHhhhhcccccc-CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 665554432 11111 1123457899999999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=314.96 Aligned_cols=241 Identities=23% Similarity=0.334 Sum_probs=202.4
Q ss_pred ccccccCCeEEEEEEEccCC---cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEec
Q 008475 105 RKLGQGQFGTTYLCTEIATG---IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMEL 181 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 181 (564)
++||+|+||.||+|....++ ..||+|.+...... ...+.+..|+.+++.+. ||||+++++++. ...+++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLD-HPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcC-CCCeeeEEEEEc-CCceEEEEEe
Confidence 46999999999999876554 78999998755432 45567889999999997 999999999876 4568999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce-e
Q 008475 182 CAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF-T 260 (564)
Q Consensus 182 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~-~ 260 (564)
+++++|.+++...+.+++..+..++.|++.||.|||+.+++||||||+|||+ +.++.+||+|||++......... .
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili---~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL---VNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE---cCCCcEEeccccccceeecCCcccc
Confidence 9999999999888889999999999999999999999999999999999999 67789999999998765433211 1
Q ss_pred ---cccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 261 ---DVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 261 ---~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
...++..|+|||.+.+ .++.++|||||||++|+|++ |..||...+..+....+..+... .....++..+.++
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l 230 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL---PRPEECPQEIYSI 230 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC---CCCCCCCHHHHHH
Confidence 1123457999998874 58999999999999999998 99999888877777777655322 2234578999999
Q ss_pred HHHhcccCCCCCCCHHHHhc
Q 008475 336 IRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~ 355 (564)
|.+||..+|++||++.++++
T Consensus 231 i~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 231 MLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHHhcCChhhCcCHHHHHH
Confidence 99999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=316.45 Aligned_cols=245 Identities=25% Similarity=0.365 Sum_probs=204.1
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.++||+|+||.||+|.+..+ ..||+|.+..... ..+.+.+|+++++.+. ||||+++++.+.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~-~~~~l 77 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYI 77 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCC-CCCcceEEEEECC-CCcEE
Confidence 35699999999999999999998655 4699999875332 2356889999999997 9999999998754 56899
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.+|+||||||+||++ +.++.+||+|||.+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill---~~~~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIED 154 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEE---cCCCcEEeccCCceeeccc
Confidence 99999999999999753 357899999999999999999999999999999999999 6778899999999976543
Q ss_pred CCce--ecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQIF--TDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.... ....++..|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+..+... .....++..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 231 (262)
T cd05071 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---PCPPECPES 231 (262)
T ss_pred cccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC---CCccccCHH
Confidence 3211 1234567899999886 458999999999999999999 89999888877777776554321 122457899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhc
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+.++|.+||+.+|++||++.++++
T Consensus 232 l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 232 LHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHHccCCcccCCCHHHHHH
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=314.63 Aligned_cols=240 Identities=22% Similarity=0.298 Sum_probs=199.5
Q ss_pred cccccCCeEEEEEEEc--cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 106 KLGQGQFGTTYLCTEI--ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 106 ~lG~G~fg~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.++++++ ||||+++++++.. ...++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~-~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLD-NPYIVRMIGVCEA-EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcC-CCCeEEEEEEEcC-CCeEEEEEeCC
Confidence 4899999999999765 445679999886542 3445567899999999997 9999999998864 57899999999
Q ss_pred CCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc----
Q 008475 184 GGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI---- 258 (564)
Q Consensus 184 ~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~---- 258 (564)
+++|.+++.. ...+++..+..++.||+.||.|||++|++||||||+|||+ +.++.+||+|||++........
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL---VNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE---cCCCcEEeccCCccccccCCccceec
Confidence 9999998875 4568999999999999999999999999999999999999 6778899999999875543221
Q ss_pred eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
.....++..|+|||.+. +.++.++|||||||++|+|++ |..||......+....+.++.... ....+++++.++|
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li 231 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLD---CPAECPPEMYALM 231 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC---CCCCCCHHHHHHH
Confidence 11122356899999887 458999999999999999996 999999888887777776654321 2245789999999
Q ss_pred HHhcccCCCCCCCHHHHhc
Q 008475 337 RKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~ 355 (564)
.+||..+|++||++.+|++
T Consensus 232 ~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 232 KDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHHcCCChhhCcCHHHHHH
Confidence 9999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=314.26 Aligned_cols=245 Identities=28% Similarity=0.425 Sum_probs=210.8
Q ss_pred eecccccccCCeEEEEEEEccCC----cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 102 TLGRKLGQGQFGTTYLCTEIATG----IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 102 ~~~~~lG~G~fg~V~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
++.+.||.|+||.||+|.+..++ ..||+|.+.... .....+.+..|+.+++.+. ||||+++++++.+....++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLD-HPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCCeeEE
Confidence 56788999999999999988766 899999986543 2335678899999999995 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+|||+++++|.+++..... +++..+..++.|++.||.+||+.+++||||||+||++ +.++.++|+|||++.....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE---ccCCeEEEcccCCceeccc
Confidence 9999999999999876544 9999999999999999999999999999999999999 7778999999999987654
Q ss_pred CCceec--ccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQIFTD--VVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~~~~--~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
...... ..+++.|+|||.+. ..++.++||||+|+++|+|++ |.+||...+.......+.++..... ...++.+
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 232 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPK---PENCPPE 232 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC---CCcCCHH
Confidence 432222 33678899999986 458999999999999999998 8999988888888888776654322 2347899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhc
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+.+++.+||..||++|||+.++++
T Consensus 233 ~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 233 IYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHHHHCcCChhhCcCHHHHHh
Confidence 999999999999999999999986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=320.69 Aligned_cols=248 Identities=23% Similarity=0.334 Sum_probs=208.4
Q ss_pred cceeecccccccCCeEEEEEEEcc-----CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIA-----TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++.+. ||||+++++++..+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~iv~~~~~~~~~~ 81 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-HPNIVKLLGVCAVGK 81 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCC
Confidence 458999999999999999998743 67789999986432 3445567889999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008475 174 CVHIVMELCAGGELFDRIIQRG----------------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENF 231 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~----------------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NI 231 (564)
..++||||+++++|.+++.... .+++..+..++.||+.||.|||+++++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 9999999999999999986432 367888999999999999999999999999999999
Q ss_pred EeecCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q 008475 232 LLVNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQ 306 (564)
Q Consensus 232 ll~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~ 306 (564)
++ +.++.++|+|||++........ ......+..|+|||.+. +.++.++|||||||++|+|++ |..||.+...
T Consensus 162 l~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 162 LV---GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred Ee---cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99 6788999999999875433221 12233456799999887 468999999999999999998 8899988888
Q ss_pred HHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 307 QGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 307 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+....+..+..... ...++.++.+||.+||+.+|++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 239 EEVIYYVRDGNVLSC---PDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 888877776654321 2357899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=314.39 Aligned_cols=242 Identities=25% Similarity=0.347 Sum_probs=207.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||.|+||.||+|.. .|+.||+|.+.... ...+++.+|+.+++.+. |+||+++++++.+....++|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDS----TAAQAFLAEASVMTTLR-HPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEe--cCcEEEEEEeccch----hHHHHHHHHHHHHHhcC-CcceeeeEEEEcCCCCeEEE
Confidence 3588899999999999999985 47899999986542 14677889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 179 MELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
|||+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili---~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE---eCCCCEEEcccccccccccc
Confidence 99999999999997765 68999999999999999999999999999999999999 77889999999999876322
Q ss_pred CceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
. .....+..|+|||.+. +.++.++||||||+++|+|++ |..||...+...+...+..+... .....+++.+.+
T Consensus 156 ~--~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 230 (256)
T cd05039 156 Q--DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM---EAPEGCPPEVYK 230 (256)
T ss_pred c--ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC---CCccCCCHHHHH
Confidence 2 2233456799999887 468899999999999999997 99999888877777766654221 122457899999
Q ss_pred HHHHhcccCCCCCCCHHHHhc
Q 008475 335 LIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~ 355 (564)
+|.+||..+|++||++.++++
T Consensus 231 li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 231 VMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHhccChhhCcCHHHHHH
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=319.61 Aligned_cols=247 Identities=25% Similarity=0.350 Sum_probs=196.3
Q ss_pred cce-eecccccccCCeEEEEEE----EccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--
Q 008475 99 DLY-TLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-- 171 (564)
Q Consensus 99 ~~y-~~~~~lG~G~fg~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-- 171 (564)
++| ++.+.||+|+||+||++. ...++..||+|.+.... .......+.+|+++++.+. ||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLY-HENIVKYKGCCSEQG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCC
Confidence 345 889999999999998865 34577899999986542 2334567889999999997 9999999998765
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
...+++||||+++++|.+++... .+++..++.++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~ 155 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL---DNDRLVKIGDFGLAK 155 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEE---cCCCcEEEeeccccc
Confidence 34689999999999999988654 59999999999999999999999999999999999999 677899999999988
Q ss_pred ccCCCCc----eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHH--H-------------HHH
Q 008475 252 FFKPGQI----FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQ--G-------------IFD 311 (564)
Q Consensus 252 ~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~--~-------------~~~ 311 (564)
....... .....++..|+|||.+. +.++.++|||||||++|+|++|..||...... + ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05080 156 AVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIE 235 (283)
T ss_pred ccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhh
Confidence 6543221 12234566799999887 45899999999999999999999998543321 0 111
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 312 AVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 312 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+..+ ... +....++.++.+++.+||..+|++|||++++++
T Consensus 236 ~~~~~-~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 236 LLERG-MRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhcC-CCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 11111 111 112357899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=315.22 Aligned_cols=248 Identities=21% Similarity=0.362 Sum_probs=208.0
Q ss_pred cceeecccccccCCeEEEEEEEccCCc---EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGI---EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+.|+..+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+..|+.+++.+. ||||+++.+++......
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFS-HHNIIRLEGVVTKFKPA 81 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEccCCCc
Confidence 357888999999999999999876654 79999886432 3444667889999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++||||+++++|.+++... +.+++..+..++.|++.||.|||+.|++||||||+||++ +.++.+||+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV---NSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE---cCCCcEEECCCccceecc
Confidence 9999999999999988764 578999999999999999999999999999999999999 677889999999987654
Q ss_pred CCCc--ee--cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 255 PGQI--FT--DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 255 ~~~~--~~--~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
.... .. ....+..|+|||++. +.++.++|||||||++|+|++ |..||...+..+....+..+... +....+
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~ 235 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRL---PAPMDC 235 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCC---CCCCCC
Confidence 3211 11 112245799999887 458999999999999999997 99999988888888777664322 222357
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+..+.+++.+||..+|++||++.+|++
T Consensus 236 ~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 236 PSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=352.72 Aligned_cols=249 Identities=27% Similarity=0.399 Sum_probs=215.7
Q ss_pred ccceeecccccccCCeEEEEEEEccCC-----cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATG-----IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
++..++.+.||+|.||.||.|.-..-. ..||+|.+.+. .+......|.+|..+|..+. |||||+++|++-+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~-HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFD-HPNIVSLIGVCLDS 767 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCC-CcceeeEEEeecCC
Confidence 455788999999999999999854322 34899988654 36778889999999999997 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEe
Q 008475 173 LCVHIVMELCAGGELFDRIIQR-------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAI 245 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~ 245 (564)
...+|++|||+||+|..+|++. ..++....+.++.+|+.|++||+++++|||||..+|+|| +....+||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL---~~~r~VKIa 844 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL---DERRVVKIA 844 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee---cccCcEEEc
Confidence 9999999999999999999875 348899999999999999999999999999999999999 777999999
Q ss_pred eCCCccccCCCCceec-c--cCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccC
Q 008475 246 DFGLSVFFKPGQIFTD-V--VGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDF 320 (564)
Q Consensus 246 DfG~~~~~~~~~~~~~-~--~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~ 320 (564)
|||+|+.+...+++.. . .-...|||||.+. +.++.|+|||||||+|||++| |..||.+.++.+++..+.++. ..
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL 923 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RL 923 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-cc
Confidence 9999996654443322 1 2235799999998 679999999999999999999 999999999999998776665 33
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 321 ~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+ +...+++.+.++|..||+.+|++||++..+++
T Consensus 924 ~--~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 924 D--PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred C--CCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 2 33579999999999999999999999999988
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=314.78 Aligned_cols=246 Identities=24% Similarity=0.335 Sum_probs=204.5
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|++.++||+|+||.||+|.+. .+..||+|.+..... ..+.+.+|+.+++++. ||||+++++++. ....+
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~~~~~-~~~~~ 76 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLR-HDKLVQLYAVVS-EEPIY 76 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcC-CCceEEEEeEEC-CCCcE
Confidence 3467999999999999999999865 566799999875432 2356889999999997 999999999875 45688
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++|||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ ++++.++|+|||++....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili---~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV---GDGLVCKIADFGLARLIE 153 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE---eCCceEEeCCceeeeecc
Confidence 999999999999998763 358999999999999999999999999999999999999 667889999999997654
Q ss_pred CCCc--eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQI--FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.... .....++..|+|||.+.+ .++.++||||||+++|+|++ |..||.+.+..+....+..+.. .+.....+.
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 230 (260)
T cd05070 154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR---MPCPQDCPI 230 (260)
T ss_pred CcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCcCCH
Confidence 3221 112334567999998874 58899999999999999999 9999988887777777765422 122245789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+.+|+.+||..+|++|||+.++++
T Consensus 231 ~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 231 SLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHH
Confidence 9999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=314.21 Aligned_cols=241 Identities=24% Similarity=0.332 Sum_probs=203.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEE-ecCCeEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY-EDSLCVHI 177 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~-~~~~~~~l 177 (564)
+.|++.+.||+|+||.||+|.. .+..||+|.+... ...+.+.+|+.+++.+. |+||+++++++ ..+...++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-----chHHHHHHHHHHHHhCC-CCCeeeEEEEEEcCCCceEE
Confidence 3588999999999999999985 4788999988543 23456889999999997 99999999975 45677999
Q ss_pred EEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE---cCCCcEEecCCccceeccc
Confidence 999999999999987654 37899999999999999999999999999999999999 7778999999999876433
Q ss_pred CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.. ....++..|+|||++.+ .++.++|||||||++|+|++ |+.||......+....+.++.. ....+.+++.+.
T Consensus 155 ~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 229 (256)
T cd05082 155 TQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPVVY 229 (256)
T ss_pred cC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCCHHHH
Confidence 22 23344568999999874 58899999999999999998 9999988887777777765432 222356889999
Q ss_pred HHHHHhcccCCCCCCCHHHHhc
Q 008475 334 DLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++|.+||..+|++|||+.++++
T Consensus 230 ~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 230 DVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=317.53 Aligned_cols=250 Identities=20% Similarity=0.340 Sum_probs=210.9
Q ss_pred cceeecccccccCCeEEEEEEEcc-----CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIA-----TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
+.|.+.+.||.|+||.||+|+... +...||+|.+.... .....+.+.+|+++++++. ||||+++++++.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLS-HKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcC-CcceeeeEEEECCCC
Confidence 458899999999999999999653 34679999876432 3335677899999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEE
Q 008475 174 CVHIVMELCAGGELFDRIIQRG---------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKA 244 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl 244 (564)
..|+||||+++++|.+++.... .+++..+..++.||+.||.|||+++|+||||||+||++ +.++.++|
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLV---SSQREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEE---eCCCcEEE
Confidence 9999999999999999997765 68999999999999999999999999999999999999 66788999
Q ss_pred eeCCCccccCCCC--ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccC
Q 008475 245 IDFGLSVFFKPGQ--IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDF 320 (564)
Q Consensus 245 ~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~ 320 (564)
+|||++....... ......++..|+|||.+. +.++.++||||||+++|+|++ |..||...........+..+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~ 238 (275)
T cd05046 159 SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL 238 (275)
T ss_pred cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC
Confidence 9999986543221 122345567799999886 458889999999999999999 889998877777777776665544
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 321 ~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.. ...++..+.+++.+||..+|.+||++.+++.+
T Consensus 239 ~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 239 PV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 32 24578999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=320.09 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=202.5
Q ss_pred ccceeecccccccCCeEEEEEEEcc----------------CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIA----------------TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~----------------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n 161 (564)
.++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++.++ |||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~-~~~ 80 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLK-DPN 80 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCC
Confidence 3569999999999999999986432 34579999986442 3445667899999999997 999
Q ss_pred ccEEEEEEecCCeEEEEEeccCCCchHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCc
Q 008475 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRG-----------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPEN 230 (564)
Q Consensus 162 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~N 230 (564)
|+++++++......++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N 160 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN 160 (296)
T ss_pred cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence 9999999999999999999999999999887643 36677899999999999999999999999999999
Q ss_pred EEeecCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh--CCCCCCCC
Q 008475 231 FLLVNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS--GVPPFWAE 304 (564)
Q Consensus 231 Ill~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt--g~~pf~~~ 304 (564)
||+ +.++.++|+|||++........ .....+++.|+|||... +.++.++|||||||++|||++ |..||...
T Consensus 161 ili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 161 CLV---GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred EEE---cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 999 6678999999999876543221 11233457899999876 569999999999999999998 77899877
Q ss_pred CHHHHHHHHHc----CCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 305 TQQGIFDAVLK----GHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 305 ~~~~~~~~i~~----~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+..+....... .......+....+++.+.+|+.+||+.||.+||++.+|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 76665543321 1111111222457899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-39 Score=313.20 Aligned_cols=245 Identities=24% Similarity=0.356 Sum_probs=203.3
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|.+.+.||+|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++.+. ||||+++++++.. ...++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~-~~~~~ 77 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKLR-HDKLVPLYAVVSE-EPIYI 77 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhCC-CCCeeeEEEEEcC-CCcEE
Confidence 35699999999999999999997654 4699998764332 2356788999999997 9999999998754 56889
Q ss_pred EEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||+.+++|.+++.... .+++..+..++.||+.||.|||+.||+||||||+||++ ++++.++|+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLIED 154 (260)
T ss_pred EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEccC
Confidence 999999999999997643 47899999999999999999999999999999999999 7788999999999976543
Q ss_pred CCc--eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQI--FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
... .....++..|+|||.+. +.++.++||||||+++|+|++ |..||.+....+....+..+... .....++..
T Consensus 155 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 231 (260)
T cd05069 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM---PCPQGCPES 231 (260)
T ss_pred CcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCcccCHH
Confidence 221 12234567899999887 458899999999999999999 99999988887777776654221 222457899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhc
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+.+++.+||.+||.+||+++++++
T Consensus 232 ~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 232 LHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHccCCcccCcCHHHHHH
Confidence 999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-39 Score=313.66 Aligned_cols=246 Identities=22% Similarity=0.315 Sum_probs=206.0
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|++.++||+|+||.||+|.. .+++.||+|.+..... ....+.+|+.+++.+. ||||+++++++. ....+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQ-HPRLVRLYAVVT-QEPIY 76 (260)
T ss_pred chHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC----cHHHHHHHHHHHHhcC-CcCeeeEEEEEc-cCCcE
Confidence 456799999999999999999985 4578899999875432 2356889999999997 999999999874 45689
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++|||+++++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||++ +.++.++|+|||++....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV---SETLCCKIADFGLARLIE 153 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE---cCCCCEEEccCcceeecC
Confidence 999999999999988653 358899999999999999999999999999999999999 777899999999987654
Q ss_pred CCCc--eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQI--FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.... .....++..|+|||.+. ..++.++||||||+++|+|++ |+.||.+.+..+....+..+... +....++.
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 230 (260)
T cd05067 154 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM---PRPDNCPE 230 (260)
T ss_pred CCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC---CCCCCCCH
Confidence 3221 12234567899999987 458899999999999999999 99999888877777776554322 22345788
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++.++|.+||..+|++||++++++.
T Consensus 231 ~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 231 ELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHH
Confidence 9999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-39 Score=316.32 Aligned_cols=249 Identities=22% Similarity=0.274 Sum_probs=207.8
Q ss_pred ccceeecccccccCCeEEEEEEEcc----CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-C
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIA----TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-S 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-~ 172 (564)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|+.+++.+. ||||+++++++.. .
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~ 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLS-HQNILPILHVCIEDG 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCC
Confidence 3569999999999999999999875 3578999988633 24556678899999999996 9999999998765 5
Q ss_pred CeEEEEEeccCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEE
Q 008475 173 LCVHIVMELCAGGELFDRIIQR--------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKA 244 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl 244 (564)
...++++||+++++|.+++... ..+++..+..++.||+.||.|||+++++||||||+||++ ++++.+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI---DEELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE---cCCCcEEE
Confidence 7789999999999999988653 358899999999999999999999999999999999999 67789999
Q ss_pred eeCCCccccCCCCce---ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCcc
Q 008475 245 IDFGLSVFFKPGQIF---TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHID 319 (564)
Q Consensus 245 ~DfG~~~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~ 319 (564)
+|||+++...+.... ....++..|+|||++.+ .++.++|||||||++|++++ |++||...+..++...+..+..
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~- 237 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYR- 237 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCC-
Confidence 999999865433211 22345667999999874 58999999999999999999 9999988887777766655422
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 320 FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 320 ~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+. ....+++++.+++.+||..||++|||+.++++
T Consensus 238 ~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 238 LA--QPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred CC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 22 22357899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=312.48 Aligned_cols=242 Identities=26% Similarity=0.365 Sum_probs=203.8
Q ss_pred ccccccCCeEEEEEEEcc-CC--cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEec
Q 008475 105 RKLGQGQFGTTYLCTEIA-TG--IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMEL 181 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~-~~--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 181 (564)
+.||+|++|.||+|.+.. .+ ..||+|.+...... ...+.+.+|+.++++++ ||||+++++.+.. ...++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLD-HENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcC-CCCccceeEEEcC-CeEEEEEEe
Confidence 468999999999999765 33 36999999765432 56778999999999997 9999999999988 899999999
Q ss_pred cCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 182 CAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 182 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
+++++|.+.+.... .+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.......
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILL---ASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEE---ecCCEEEeccccccccccccccc
Confidence 99999999997754 68999999999999999999999999999999999999 667899999999988764321
Q ss_pred --ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 258 --IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 258 --~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
......++..|+|||.+.. .++.++|||||||++|+|++ |..||...+..+....+........ ....++..+.
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 231 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE--RPEACPQDIY 231 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCC--CCccCCHHHH
Confidence 1112456778999999874 68999999999999999999 9999988887777776654322222 2235789999
Q ss_pred HHHHHhcccCCCCCCCHHHHhc
Q 008475 334 DLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+++.+||..+|++||++.++++
T Consensus 232 ~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 232 NVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHHCCCCcccCCCHHHHHH
Confidence 9999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=316.48 Aligned_cols=252 Identities=27% Similarity=0.441 Sum_probs=209.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC--CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI--SREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
+|.+.+.||+|+||.||++.+..++..+++|++...... .......+..|+.+++.+. ||||+++++++.+....++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD-HPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC-CCcHHHHHHHHhcCCceEE
Confidence 488999999999999999999887777777776532221 2223345678999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 178 VMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
||||+++++|.+.+.. ...+++..+..++.|++.||.|||++|++|+||+|+||++ +. +.++|+|||++...
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili---~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFL---KN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEe---ec-CCEeecccCceeec
Confidence 9999999999888753 3568999999999999999999999999999999999999 32 46999999998765
Q ss_pred CCCC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 254 KPGQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 254 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.... ......+++.|+|||.+.+ .++.++|+||||+++|+|++|..||...........+..+.... ....++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 232 (260)
T cd08222 156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPS---LPETYSRQ 232 (260)
T ss_pred CCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC---CcchhcHH
Confidence 4332 2334568889999998864 47889999999999999999999998777666666665543222 12357889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
+.++|.+||..+|++||++.++++||||
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 233 LNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 9999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=312.51 Aligned_cols=247 Identities=24% Similarity=0.345 Sum_probs=208.5
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|++.+.||+|+||.||+|.+. .+..||+|.+..... ..+.+.+|+.+++.+. ||||+++++++......+
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLR-HDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCC-CCCEeeeeeeeecCCceE
Confidence 3567999999999999999999975 557899999875432 3456889999999997 999999999999989999
Q ss_pred EEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+||||+++++|.+++.... .++...+..++.||+.||.|||++|++|+||||+||++ +.++.+||+|||++....
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~ 154 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILV---GENLVCKIADFGLARLIE 154 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEE---cCCCCEEECccccceecc
Confidence 9999999999999987643 68999999999999999999999999999999999999 677899999999987654
Q ss_pred CCCc--eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQI--FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.... .....++..|+|||.+.+ .++.++||||+||++|+|++ |+.||.+......+..+..+... ......+.
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (261)
T cd05034 155 DDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM---PRPPNCPE 231 (261)
T ss_pred chhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCH
Confidence 3221 112234568999999874 58899999999999999999 99999888887778777654321 12234688
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++.+++.+||..+|++||+++++++
T Consensus 232 ~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 232 ELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHH
Confidence 9999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=313.06 Aligned_cols=268 Identities=27% Similarity=0.465 Sum_probs=210.6
Q ss_pred cccccccc-cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCC-------CCc
Q 008475 91 GHKTDNIR-DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH-------KNI 162 (564)
Q Consensus 91 ~~~~~~~~-~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-------~ni 162 (564)
..+.+.|. .+|.+.++||-|.|++||+|.+....+.||+|+++. .....+....||++|++++.+ .+|
T Consensus 69 V~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS----AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~V 144 (590)
T KOG1290|consen 69 VRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS----AQHYTEAALDEIKLLQQVREGDPNDPGKKCV 144 (590)
T ss_pred eeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh----hhHHHHHHHHHHHHHHHHHhcCCCCCCCcee
Confidence 34667777 889999999999999999999999999999999864 244566788999999999843 369
Q ss_pred cEEEEEEe----cCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeec
Q 008475 163 VTIKGAYE----DSLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVN 235 (564)
Q Consensus 163 v~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~ 235 (564)
|+|++.|. .+.++|+|+|++ |.+|+.+|... +.++...++.|++||+.||.|||. .||||.||||+|||+..
T Consensus 145 V~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 145 VQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred eeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence 99999996 467899999999 88999999764 569999999999999999999996 69999999999999954
Q ss_pred CC------------------------------------------------------------------------------
Q 008475 236 KD------------------------------------------------------------------------------ 237 (564)
Q Consensus 236 ~~------------------------------------------------------------------------------ 237 (564)
++
T Consensus 224 ~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~ 303 (590)
T KOG1290|consen 224 TEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESY 303 (590)
T ss_pred cccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccccccccccccc
Confidence 31
Q ss_pred ---------------------------------C----------------------------------------------
Q 008475 238 ---------------------------------D---------------------------------------------- 238 (564)
Q Consensus 238 ---------------------------------~---------------------------------------------- 238 (564)
.
T Consensus 304 n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~ 383 (590)
T KOG1290|consen 304 NNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPD 383 (590)
T ss_pred ccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCC
Confidence 0
Q ss_pred ------CCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC------
Q 008475 239 ------DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET------ 305 (564)
Q Consensus 239 ------~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~------ 305 (564)
+..+||+|||-|+... ..++.-+.|..|+|||++.+ .|++.+||||++|++|||+||...|....
T Consensus 384 ~~~~~~di~vKIaDlGNACW~~--khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~r 461 (590)
T KOG1290|consen 384 IPLPECDIRVKIADLGNACWVH--KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSR 461 (590)
T ss_pred CCCCccceeEEEeeccchhhhh--hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCc
Confidence 0125666666665532 33455677999999999997 59999999999999999999999884321
Q ss_pred HHHHHHHHHc------------CCcc-----------C--CCCCCCC---------C----CHHHHHHHHHhcccCCCCC
Q 008475 306 QQGIFDAVLK------------GHID-----------F--ESDPWPL---------I----SDSAKDLIRKMLCSQPSER 347 (564)
Q Consensus 306 ~~~~~~~i~~------------~~~~-----------~--~~~~~~~---------~----s~~~~~li~~~l~~dp~~R 347 (564)
.++.+..|.. |... - ...+|+. + ..++.+||.-||+.+|++|
T Consensus 462 DEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR 541 (590)
T KOG1290|consen 462 DEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKR 541 (590)
T ss_pred cHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCcccc
Confidence 2333333322 1110 0 0111221 2 2467899999999999999
Q ss_pred CCHHHHhcCCCcCCCCCC
Q 008475 348 LTAHEVLCHPWICENGVA 365 (564)
Q Consensus 348 ~s~~~vl~hp~~~~~~~~ 365 (564)
|||.++|+|||+......
T Consensus 542 ~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 542 PTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred ccHHHHhcCccccCCCCC
Confidence 999999999999976544
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=313.79 Aligned_cols=247 Identities=22% Similarity=0.286 Sum_probs=207.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCc----EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGI----EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
.+|++.+.||+|+||.||+|.+..+|. .||+|.+.... .......+.+|+.+++.+. ||||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVD-HPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEec-Cc
Confidence 458999999999999999999876665 58999876543 3455677889999999997 9999999999887 78
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+|+||||||+||++ +.++.+||+|||++...
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL 159 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE---cCCCeEEECCCcccccc
Confidence 99999999999999998764 468999999999999999999999999999999999999 67788999999999876
Q ss_pred CCCCcee---cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 254 KPGQIFT---DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 254 ~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
....... ...++..|+|||.+. +.++.++|+|||||++|||++ |..||.+....++...+..+... + ....+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~ 236 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERL-P--QPPIC 236 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCC-C--CCCCC
Confidence 5332211 122356799999887 468999999999999999998 99999988888877777665332 1 12347
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+..+.+++.+||..||..||++.++++
T Consensus 237 ~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 237 TIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 789999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=307.34 Aligned_cols=242 Identities=25% Similarity=0.327 Sum_probs=201.8
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
++||+|+||.||+|... ++..||+|.+.... .......+.+|+++++.+. ||||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYD-HPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCC-CCCcCeEEEEEecCCccEEEEECCCC
Confidence 36999999999999854 68899999886432 3444557889999999997 99999999999999999999999999
Q ss_pred CchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCcee--c
Q 008475 185 GELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT--D 261 (564)
Q Consensus 185 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~--~ 261 (564)
++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.......... .
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE---cCCCeEEECCCccceeccccccccCCC
Confidence 9999988653 457899999999999999999999999999999999999 677889999999987543322111 1
Q ss_pred ccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHh
Q 008475 262 VVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339 (564)
Q Consensus 262 ~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 339 (564)
..++..|+|||++. +.++.++||||||+++|+|++ |..||...........+..+... .....++..+.+++.+|
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~ 230 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM---SCPQKCPDDVYKVMQRC 230 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHH
Confidence 23356799999987 458899999999999999998 99999888877776666654321 12235789999999999
Q ss_pred cccCCCCCCCHHHHhcC
Q 008475 340 LCSQPSERLTAHEVLCH 356 (564)
Q Consensus 340 l~~dp~~R~s~~~vl~h 356 (564)
|..+|++||++.++++.
T Consensus 231 l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 231 WDYKPENRPKFSELQKE 247 (250)
T ss_pred cccCcccCCCHHHHHHH
Confidence 99999999999999753
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=312.74 Aligned_cols=248 Identities=26% Similarity=0.350 Sum_probs=206.0
Q ss_pred cceeecccccccCCeEEEEEEEccC---CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIAT---GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+.|.+.+.||+|+||.||+|.+... ...||+|...... .....+.+.+|+.+++.+. ||||+++++++.+ ...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFD-HPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCC-CCchhceeEEEcC-CCc
Confidence 4588999999999999999987544 3468999886432 3455678899999999997 9999999998876 457
Q ss_pred EEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|+||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||++ +..+.+||+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV---SSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEE---ecCCCeEEccCceeeecc
Confidence 89999999999999997644 58999999999999999999999999999999999999 667789999999987654
Q ss_pred CCCcee--cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQIFT--DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~~~~--~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
...... ...++..|+|||.+. ..++.++|||||||++|+|++ |..||.+....+....+.++... .....++.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~ 235 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL---PMPPNCPP 235 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC---CCCCCCCH
Confidence 432221 223346799999887 458999999999999999986 99999888877777777665432 12346789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+.++|.+||..+|.+|||+.+++..
T Consensus 236 ~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 236 TLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=311.56 Aligned_cols=244 Identities=22% Similarity=0.293 Sum_probs=193.5
Q ss_pred ccccccCCeEEEEEEEc--cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEecc
Q 008475 105 RKLGQGQFGTTYLCTEI--ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELC 182 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 182 (564)
+.||+|+||.||+|... .++..+|+|.+.... .......+.+|+.+++.++ ||||+++++++.+...+++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQ-HSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCCcEEEEECC
Confidence 36999999999999854 345679999886543 2333456888999999997 999999999999999999999999
Q ss_pred CCCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 183 AGGELFDRIIQRG-----HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 183 ~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
++|+|.+++.... ..++..+..++.|++.||.|||+.+++||||||+||++ +.++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~---~~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL---TADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEECCccccccccCcc
Confidence 9999999986532 35677888999999999999999999999999999999 677899999999987543322
Q ss_pred c---eecccCCCcccchhhhhh--------cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHc-CCccCCCCC
Q 008475 258 I---FTDVVGSPYYVAPEVLLK--------HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLK-GHIDFESDP 324 (564)
Q Consensus 258 ~---~~~~~gt~~y~aPE~~~~--------~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~-~~~~~~~~~ 324 (564)
. .....++..|+|||++.+ .++.++|||||||++|||++ |..||......+....... .......+.
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR 234 (269)
T ss_pred eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence 1 123456788999999863 25789999999999999996 9999987666554433322 222222221
Q ss_pred -CCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 325 -WPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 325 -~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
....++.+.+++.+|+ .+|++|||+++|+.
T Consensus 235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred cCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 1246788999999999 68999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-39 Score=317.55 Aligned_cols=252 Identities=23% Similarity=0.358 Sum_probs=211.8
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
-.++...+.++||+|.||.|.+|.- ..+..||||.++... .......+.+|+++|.+|+ ||||+.++++|..++.+
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePi 610 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDA--TKNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPL 610 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCccc--chhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCch
Confidence 3456688899999999999999994 446899999997654 4555688999999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 176 HIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
|+|+||++.|+|.+++.+.. .........|+.||+.|++||.+.++|||||.+.|+|+ ++++++||+|||.++..
T Consensus 611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~l 687 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNL 687 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCccccccc
Confidence 99999999999999998763 23455667799999999999999999999999999999 89999999999999977
Q ss_pred CCCCcee---cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHc-----CCccCCC
Q 008475 254 KPGQIFT---DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS--GVPPFWAETQQGIFDAVLK-----GHIDFES 322 (564)
Q Consensus 254 ~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~-----~~~~~~~ 322 (564)
-.+..+. ..+-..+|||||.+. +++++++|||+||+++||+++ ...||.....+++.++.-. +...+ .
T Consensus 688 ysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~-l 766 (807)
T KOG1094|consen 688 YSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV-L 766 (807)
T ss_pred ccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee-c
Confidence 6655433 234467899999765 899999999999999999765 7889988888777766432 11122 2
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 323 ~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
...+-++..+.+||.+||..|-++||+++++..
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 233568999999999999999999999999843
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=309.52 Aligned_cols=245 Identities=25% Similarity=0.406 Sum_probs=207.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+.||.|+||.||+|.+. .+..+|+|.+..... ....+..|+++++++. ||||+++++++......++||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLS-HPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCC-CCCeeeEEEEEccCCceEEEE
Confidence 4888999999999999999875 467899998865432 2346788999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 180 ELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 180 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
||+++++|.+++... +.+++..+..++.|++.||.|||+.+++||||||+||++ +.++.+||+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV---GENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEE---cCCCeEEECCCcceeecccCcc
Confidence 999999999988764 468999999999999999999999999999999999999 6778899999999876533221
Q ss_pred --eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 259 --FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 259 --~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
.....++..|+|||.+. +.++.++||||||+++|+|++ |..||.........+.+..+..... ....+..+.+
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK---PRLASQSVYE 232 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC---CCCCCHHHHH
Confidence 11223456899999987 468899999999999999998 9999988888888887766543322 2346899999
Q ss_pred HHHHhcccCCCCCCCHHHHhcC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~h 356 (564)
|+.+||+.+|++|||+.+++++
T Consensus 233 l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 233 LMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHcccChhhCCCHHHHHHh
Confidence 9999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=315.53 Aligned_cols=247 Identities=26% Similarity=0.406 Sum_probs=199.6
Q ss_pred eeecccccccCCeEEEEEEE----ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--Ce
Q 008475 101 YTLGRKLGQGQFGTTYLCTE----IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--LC 174 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~ 174 (564)
|++.+.||+|+||.||+|+. ..++..||+|.+.... .......+.+|+.+++.+. ||||+++++++... ..
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCCCc
Confidence 78899999999999999984 4578899999986432 3445667899999999997 99999999998775 67
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++||||++|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.++|+|||++...
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~---~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAI 159 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE---cCCCCEEECCCcccccc
Confidence 89999999999999988664 358999999999999999999999999999999999999 66788999999998865
Q ss_pred CCCCc----eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC---------------HHHHHHHH
Q 008475 254 KPGQI----FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET---------------QQGIFDAV 313 (564)
Q Consensus 254 ~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~---------------~~~~~~~i 313 (564)
..... .....++..|+|||.+.+ .++.++|||||||++|+|+++..|+.... .......+
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL 239 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence 43321 123456678999998874 58899999999999999999877653211 11122222
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 314 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
..+.. . +....++..+.+||.+||+.+|.+|||+.+++++
T Consensus 240 ~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 240 EEGKR-L--PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HcCcc-C--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 22221 1 2234588999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=310.60 Aligned_cols=244 Identities=20% Similarity=0.296 Sum_probs=193.9
Q ss_pred ccccccCCeEEEEEEEcc--CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEecc
Q 008475 105 RKLGQGQFGTTYLCTEIA--TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELC 182 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 182 (564)
+.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.+. ||||+++++.+.....+|+||||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~-h~nii~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELN-HPNVLQCLGQCIESIPYLLVLEFC 77 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCC-CCCcceEEEEECCCCceEEEEEeC
Confidence 369999999999996432 34578888775432 3444567888999999996 999999999999999999999999
Q ss_pred CCCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 183 AGGELFDRIIQRG-----HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 183 ~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
++|+|.+++.... ..++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---TADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---cCCCcEEEeccccccccccch
Confidence 9999999987643 24677889999999999999999999999999999999 778899999999986543322
Q ss_pred ce---ecccCCCcccchhhhhh--------cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CccCCCC-
Q 008475 258 IF---TDVVGSPYYVAPEVLLK--------HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKG-HIDFESD- 323 (564)
Q Consensus 258 ~~---~~~~gt~~y~aPE~~~~--------~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~-~~~~~~~- 323 (564)
.. ....++..|+|||++.. .++.++|||||||++|||++ |..||......+.+..+... ....+.+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQ 234 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCc
Confidence 11 22345677999999752 36789999999999999999 88899887766665554433 2232222
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 324 ~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
....+++.+.+++..|+ .||++|||+++|++
T Consensus 235 ~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 235 LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 12357888999999998 59999999999876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=311.25 Aligned_cols=251 Identities=26% Similarity=0.430 Sum_probs=210.8
Q ss_pred eeecccccccCCeEEEEEEEcc-CCcEEEEEEeccccC-------CCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIA-TGIEFACKSISKRKL-------ISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
|++.+.||+|+||.||+|.+.. +++.+|+|.+..... ........+.+|+.++.+..+||||+++++++..+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 7888999999999999999887 678999998854321 22334566778999887644599999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 173 LCVHIVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
...++||||+++++|.+++.. ...+++..++.++.|++.||.|||+ .+++|+||+|+||++ +.++.+||+||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---~~~~~~~l~df 158 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITDF 158 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE---CCCCcEEEecc
Confidence 999999999999999887743 3468999999999999999999996 789999999999999 77789999999
Q ss_pred CCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 248 GLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 248 G~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
|.+.............++..|+|||.+.+ .++.++||||||+++|+|++|..||...........+..+..... ...
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~ 236 (269)
T cd08528 159 GLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL--PEG 236 (269)
T ss_pred cceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC--Ccc
Confidence 99987655444456678999999999874 588999999999999999999999988877766666665544322 223
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+++.+.++|.+||..||++||++.++..+
T Consensus 237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 237 MYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred cCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 578999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=307.28 Aligned_cols=241 Identities=25% Similarity=0.350 Sum_probs=202.7
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCC
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
++||+|+||.||+|.+.. ++.||+|.+..... ......+.+|+++++++. ||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYD-HPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCC-CCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 469999999999999877 99999998865432 345667899999999997 99999999999999999999999999
Q ss_pred CchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce---e
Q 008475 185 GELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF---T 260 (564)
Q Consensus 185 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~---~ 260 (564)
++|.+++... ..+++..+..++.+++.||.|||+++++||||||+||++ +.++.+||+|||++......... .
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCCCcEEEeeccccccccCCcceeccc
Confidence 9999998663 468899999999999999999999999999999999999 77789999999998765422211 1
Q ss_pred cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 008475 261 DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338 (564)
Q Consensus 261 ~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 338 (564)
....+..|+|||.+. +.++.++|||||||++|+|++ |..||...........+..+. .. .....++.++.+++.+
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~ 230 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-RM--PAPQLCPEEIYRLMLQ 230 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-CC--CCCccCCHHHHHHHHH
Confidence 122355799999887 458999999999999999999 899998887776666665432 11 1224578999999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 008475 339 MLCSQPSERLTAHEVLC 355 (564)
Q Consensus 339 ~l~~dp~~R~s~~~vl~ 355 (564)
||..+|.+|||+.++++
T Consensus 231 ~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 231 CWAYDPENRPSFSEIYN 247 (251)
T ss_pred HhccChhhCcCHHHHHH
Confidence 99999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=308.65 Aligned_cols=246 Identities=22% Similarity=0.329 Sum_probs=205.4
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|++.+.||+|+||.||+|.+. .+..+|+|.+... ....+.+.+|+.+++.+. |+||+++++.+.. ...+
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQ-HDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcC-CCCcceEEEEEcC-CCeE
Confidence 4567999999999999999999854 5567999988643 223567889999999997 9999999999887 7789
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++|||+++++|.+++... ..++...+..++.||+.||.|||+.|++||||||+||++ +..+.+||+|||.+....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIE 153 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCCcceeecc
Confidence 999999999999999763 357888999999999999999999999999999999999 678899999999987654
Q ss_pred CCCc--eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQI--FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.... .....++..|+|||++.. .++.++|+|||||++|++++ |..||...+.......+..+... +....++.
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 230 (260)
T cd05073 154 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM---PRPENCPE 230 (260)
T ss_pred CCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC---CCcccCCH
Confidence 3221 112334567999999874 58889999999999999999 99999988877777766654322 22346789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++.+++.+||+.+|++||++.+++.
T Consensus 231 ~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 231 ELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHH
Confidence 9999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=317.10 Aligned_cols=265 Identities=29% Similarity=0.472 Sum_probs=223.9
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC----CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe-
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI----SREDVEDVRREIQIMHHLAGHKNIVTIKGAYE- 170 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~- 170 (564)
.+.++|-++.+||+|+|+.||+|.+....+.||+|+-...+.. ..+..+...+|.+|-+.|. ||.||++|++|.
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLD-HpRIVKlYDyfsl 538 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELD-HPRIVKLYDYFSL 538 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccC-cceeeeeeeeeee
Confidence 3568899999999999999999999999999999986543321 2334556778999999997 999999999996
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--CCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL--GVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
+.+.+|-|+|||+|.+|.-+|++.+.+++.+++.|+.||+.||.||.+. .|||-||||.|||+.+.+..|.+||+|||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 5677999999999999999999999999999999999999999999986 49999999999999877778999999999
Q ss_pred CccccCCCC--------ceecccCCCcccchhhhh-h----cCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHH--
Q 008475 249 LSVFFKPGQ--------IFTDVVGSPYYVAPEVLL-K----HYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDA-- 312 (564)
Q Consensus 249 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~-~----~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~-- 312 (564)
+++.+.... ......||.+|++||.+. + ..+.++||||+|||+|..+.|+.||...- .+++++.
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNT 698 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENT 698 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhc
Confidence 999876433 234578999999999875 3 47889999999999999999999996543 4444432
Q ss_pred HH-cCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 313 VL-KGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 313 i~-~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
|+ .....|+. -+.++.++++||++||+.--++|....++.+||||....
T Consensus 699 IlkAtEVqFP~--KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~ 748 (775)
T KOG1151|consen 699 ILKATEVQFPP--KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHI 748 (775)
T ss_pred hhcceeccCCC--CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchh
Confidence 22 23344444 367999999999999999999999999999999998644
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-39 Score=314.14 Aligned_cols=240 Identities=21% Similarity=0.254 Sum_probs=193.3
Q ss_pred ccccccCCeEEEEEEEccCCc-------EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 105 RKLGQGQFGTTYLCTEIATGI-------EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
+.||.|+||.||+|.+...+. .||+|.+... .....+.+..|+.+++.+. ||||+++++++..+...++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLS-HKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCC-CCChhheeeEEEeCCCcEE
Confidence 369999999999999765443 4888877533 2344567888999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC-----CCcEEEeeCCCcc
Q 008475 178 VMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD-----DFSLKAIDFGLSV 251 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~-----~~~~kl~DfG~~~ 251 (564)
||||+++|+|..++...+ .+++..+..++.||+.||.|||++||+||||||+|||+..++. .+.++++|||++.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999999987654 5899999999999999999999999999999999999954321 1347999999987
Q ss_pred ccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSG-VPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
...+. ....+++.|+|||++.+ .++.++|||||||++|+|++| .+||........... ......++ ...
T Consensus 157 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~-~~~~~~~~----~~~ 228 (258)
T cd05078 157 TVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF-YEDRHQLP----APK 228 (258)
T ss_pred ccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH-HHccccCC----CCC
Confidence 65432 23567889999999974 478999999999999999998 466666555443332 22222222 235
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+.++.+||.+||+.||++|||++++++.
T Consensus 229 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 229 WTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 6889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=334.11 Aligned_cols=245 Identities=30% Similarity=0.456 Sum_probs=199.2
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC------e
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL------C 174 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~------~ 174 (564)
|...+.||+|+||.||+++++.+|+.||||.+.+.. .....++.-+|+++|++|. |||||+++++-++.. .
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCccccc
Confidence 667789999999999999999999999999997654 4455678899999999998 999999999876543 5
Q ss_pred EEEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC-CCCCcEEEeeCCCc
Q 008475 175 VHIVMELCAGGELFDRIIQR---GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK-DDDFSLKAIDFGLS 250 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~-~~~~~~kl~DfG~~ 250 (564)
..+|||||.||+|...|... ..+++.+.+.++..+..||.|||++||+||||||.||++... ++....||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 68999999999999999653 459999999999999999999999999999999999999542 34557899999999
Q ss_pred cccCCCCceecccCCCcccchhhhh--hcCCCcchHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHc---------
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAET----QQGIFDAVLK--------- 315 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~----~~~~~~~i~~--------- 315 (564)
+....+....+.+||+.|++||++. +.|+..+|.|||||++|+++||..||.... ..++.-.+..
T Consensus 172 rel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~ 251 (732)
T KOG4250|consen 172 RELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIG 251 (732)
T ss_pred ccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEe
Confidence 9999999999999999999999998 468999999999999999999999995422 1222222222
Q ss_pred ------CCccCCCC--CCCCCCH----HHHHHHHHhcccCCCCCC
Q 008475 316 ------GHIDFESD--PWPLISD----SAKDLIRKMLCSQPSERL 348 (564)
Q Consensus 316 ------~~~~~~~~--~~~~~s~----~~~~li~~~l~~dp~~R~ 348 (564)
|.+.+... ..-.++. .+..+|..+|..+|.+|-
T Consensus 252 ~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 252 AQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 22221111 1111222 345678889999999998
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=308.51 Aligned_cols=243 Identities=26% Similarity=0.370 Sum_probs=196.9
Q ss_pred ccccccCCeEEEEEEEcc---CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe-cCCeEEEEEe
Q 008475 105 RKLGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE-DSLCVHIVME 180 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~-~~~~~~lv~e 180 (564)
+.||+|+||.||+|.+.. .+..||+|.+.... .....+.+.+|+.+++.+. ||||+++++++. .+...++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDFS-HPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccCC-CCCcceEEEEeecCCCCcEEEEe
Confidence 468999999999998653 34579999875322 3445678889999999997 999999999765 4667899999
Q ss_pred ccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc-
Q 008475 181 LCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI- 258 (564)
Q Consensus 181 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~- 258 (564)
|+.+++|.+++... ..+++..+..++.||+.||.|||+.+++||||||+|||+ +.++.+||+|||++........
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili---~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML---DESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCccccccccCCcce
Confidence 99999999998764 346778889999999999999999999999999999999 6778899999999875432211
Q ss_pred ----eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 259 ----FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 259 ----~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.....++..|+|||.+. ..++.++|||||||++|||++ |.+||...+..+....+..+..... ...+++.+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQ---PEYCPDPL 231 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC---CCcCCHHH
Confidence 12234567899999886 458999999999999999999 5677877777777766665532221 23468899
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+++.+||..+|++||++.+++..
T Consensus 232 ~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 232 YEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred HHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=308.58 Aligned_cols=240 Identities=28% Similarity=0.387 Sum_probs=202.9
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||++. .+++.||+|.+.... ..+.+.+|+.+++.+. ||||+++++++... ..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~-~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-----TAQAFLEETAVMTKLH-HKNLVRLLGVILHN-GLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-----hHHHHHHHHHHHHhCC-CCCcCeEEEEEcCC-CcEEE
Confidence 348999999999999999987 478889999885432 2357889999999997 99999999998765 47999
Q ss_pred EeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 179 MELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
|||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||++ +.++.+||+|||++......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili---~~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV---SEDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCcEEECCCccceecccc
Confidence 99999999999987643 47899999999999999999999999999999999999 67789999999998764322
Q ss_pred CceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
......+..|+|||.+. +.++.++|||||||++|+|++ |.+||......+....+.++... .....+++.+.+
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 228 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM---EPPEGCPADVYV 228 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC---CCCCcCCHHHHH
Confidence 12233456899999887 468999999999999999998 99999988887777777665322 223467899999
Q ss_pred HHHHhcccCCCCCCCHHHHhc
Q 008475 335 LIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~ 355 (564)
++.+||+.+|..||++++++.
T Consensus 229 li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 229 LMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=309.95 Aligned_cols=240 Identities=18% Similarity=0.212 Sum_probs=190.9
Q ss_pred ccccccCCeEEEEEEEcc------------CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 105 RKLGQGQFGTTYLCTEIA------------TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~------------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
+.||+|+||.||+|+... ....||+|.+... .......+..|+.+++.+. ||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~-hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVS-HKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC
Confidence 368999999999998532 2235888887543 2334557788999999997 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC----CCCcEEEeeC
Q 008475 173 LCVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD----DDFSLKAIDF 247 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~----~~~~~kl~Df 247 (564)
...++||||+++++|..++.. ...+++..+..++.||+.||.|||+++|+||||||+|||+..+. ....++++||
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999999999888765 35689999999999999999999999999999999999994321 1123899999
Q ss_pred CCccccCCCCceecccCCCcccchhhhh--hcCCCcchHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHcCCccCCCCC
Q 008475 248 GLSVFFKPGQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILL-SGVPPFWAETQQGIFDAVLKGHIDFESDP 324 (564)
Q Consensus 248 G~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~ell-tg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 324 (564)
|++...... ....++..|+|||.+. +.++.++|||||||++|+|+ +|..||......+... ...+.....
T Consensus 157 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~~~~~--- 229 (262)
T cd05077 157 GIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQCMLV--- 229 (262)
T ss_pred CCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcCccCC---
Confidence 998754322 2346788999999886 35899999999999999998 5888987765544332 222222211
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
...++++.+||.+||+.||.+||++.+|+++
T Consensus 230 -~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 230 -TPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred -CCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 2246789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=312.80 Aligned_cols=239 Identities=18% Similarity=0.197 Sum_probs=191.5
Q ss_pred cccccCCeEEEEEEEccC------------------------CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCC
Q 008475 106 KLGQGQFGTTYLCTEIAT------------------------GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161 (564)
Q Consensus 106 ~lG~G~fg~V~~~~~~~~------------------------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n 161 (564)
.||+|+||.||+|....+ ...||+|++... .......+.+|+.+++.+. |||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~-h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVS-HIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCC-CCC
Confidence 699999999999975322 235888888543 2334456788999999997 999
Q ss_pred ccEEEEEEecCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC----
Q 008475 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK---- 236 (564)
Q Consensus 162 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~---- 236 (564)
|+++++++.+....++||||+++++|..++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+...
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999888865 4678999999999999999999999999999999999999532
Q ss_pred CCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHH
Q 008475 237 DDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILL-SGVPPFWAETQQGIFDAV 313 (564)
Q Consensus 237 ~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~ell-tg~~pf~~~~~~~~~~~i 313 (564)
.....+||+|||++...... ....++..|+|||.+.+ .++.++|||||||++|||+ +|..||......+....+
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 234 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFY 234 (274)
T ss_pred CccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHH
Confidence 12235899999987643222 22457788999998864 4899999999999999985 699999877665544333
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 314 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.. ....+ ...++.+.++|.+||+.+|++|||+.++|++
T Consensus 235 ~~-~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 235 EK-KHRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred Hh-ccCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 22 22222 2245789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=307.83 Aligned_cols=228 Identities=25% Similarity=0.347 Sum_probs=188.7
Q ss_pred cCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCCchHH
Q 008475 110 GQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFD 189 (564)
Q Consensus 110 G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 189 (564)
|.+|.||+|++..+++.||+|.+.... ....|...+.... ||||+++++++.....+++||||++|++|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHC-VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcC-CCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 899999999999999999999996542 1223444444444 9999999999999999999999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecccCCCccc
Q 008475 190 RIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV 269 (564)
Q Consensus 190 ~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~ 269 (564)
++.....+++..+..++.|++.||.|||++||+||||||+||++ +.++.++|+|||.+...... .....++..|+
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~df~~~~~~~~~--~~~~~~~~~y~ 149 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL---DDRGHIQLTYFSRWSEVEDS--CDGEAVENMYC 149 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEecccchhccccc--cccCCcCcccc
Confidence 99887789999999999999999999999999999999999999 77788999999987654432 23345677899
Q ss_pred chhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 008475 270 APEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL 348 (564)
Q Consensus 270 aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~ 348 (564)
|||.+.+ .++.++||||+||++|+|++|..|+...... + ....... ....+++.+.+||.+||+.||++||
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~R~ 221 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----I-NTHTTLN--IPEWVSEEARSLLQQLLQFNPTERL 221 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-ccccccC--CcccCCHHHHHHHHHHccCCHHHhc
Confidence 9998874 5889999999999999999999987543221 0 0001111 1235789999999999999999999
Q ss_pred CH-----HHHhcCCCc
Q 008475 349 TA-----HEVLCHPWI 359 (564)
Q Consensus 349 s~-----~~vl~hp~~ 359 (564)
++ +++++||||
T Consensus 222 ~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 222 GAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCCccchHHHHcCCCC
Confidence 86 999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=315.08 Aligned_cols=248 Identities=21% Similarity=0.281 Sum_probs=203.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCc----EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGI----EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+.|++.+.||+|+||.||+|.+..++. .||+|.+.... .......+.+|+.+++.+. ||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMD-HPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCcccEEEEEcCC-C
Confidence 458889999999999999999887776 46888875432 2334456889999999997 99999999988754 4
Q ss_pred EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++++||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill---~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVKITDFGLARLL 159 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee---cCCCceEEccccccccc
Confidence 679999999999999987644 58999999999999999999999999999999999999 66778999999999865
Q ss_pred CCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 254 KPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 254 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
..... .....++..|+|||.+.+ .++.++|||||||++|||++ |..||.+.........+..+.. ++ ..+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~ 236 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER-LP--QPPIC 236 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-CC--CCCCC
Confidence 43221 122345678999999874 58999999999999999997 9999988776666655554432 22 22457
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+..+.+++.+||..+|++||++.++++.
T Consensus 237 ~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 237 TIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 8899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=311.52 Aligned_cols=245 Identities=25% Similarity=0.354 Sum_probs=200.0
Q ss_pred ccccccCCeEEEEEEEccCC------cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 105 RKLGQGQFGTTYLCTEIATG------IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.||+|+||.||+|++.... ..+|+|.+.+.. .......+.+|+.+++.+. ||||+++++++......++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFN-HPNIVKLLGVCLLNEPQYII 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcC-CCCeeeEeeeecCCCCeEEE
Confidence 36999999999999976443 679999886432 2344567889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC--CCCcEEEeeCCC
Q 008475 179 MELCAGGELFDRIIQR-------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD--DDFSLKAIDFGL 249 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~--~~~~~kl~DfG~ 249 (564)
|||+++++|.+++... ..+++..+..++.||+.||.|||+.+++|+||||+||++..++ ....++|+|||+
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999998642 3478899999999999999999999999999999999994322 223899999999
Q ss_pred ccccCCCCc---eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCC
Q 008475 250 SVFFKPGQI---FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDP 324 (564)
Q Consensus 250 ~~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 324 (564)
+........ .....++..|+|||++. +.++.++|||||||++|+|++ |..||...+..+....+..+... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~ 234 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRL---QK 234 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCcc---CC
Confidence 876533221 11234567899999987 458999999999999999998 99999888777776666543321 12
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
...+|..+.++|.+||..+|.+||+++++++
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred cccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 2457899999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=336.33 Aligned_cols=341 Identities=20% Similarity=0.280 Sum_probs=220.4
Q ss_pred ccceeecccccccCCeEEEEEEEccC----CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEE-----
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIAT----GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGA----- 168 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~----- 168 (564)
.+.|.+.+.||+|+||.||+|.+..+ +..||+|++..... .+....| .++... +.+++.++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~~-~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE--RVRRAC-PNSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH--HHHhhc-hhhHHHHHHhhhccc
Confidence 35699999999999999999999888 89999998754221 1111111 112221 2233222221
Q ss_pred -EecCCeEEEEEeccCCCchHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCCEeecCC
Q 008475 169 -YEDSLCVHIVMELCAGGELFDRIIQRGH--------------------YSERKAAELTRIIVGVVEACHSLGVMHRDLK 227 (564)
Q Consensus 169 -~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------------------~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlk 227 (564)
......++|||||+.+++|.+++..... .....+..++.||+.||.|||+++|+|||||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 2456779999999999999998865321 1234567899999999999999999999999
Q ss_pred CCcEEeecCCCCCcEEEeeCCCccccCCC--CceecccCCCcccchhhhhh-----------------------cCCCcc
Q 008475 228 PENFLLVNKDDDFSLKAIDFGLSVFFKPG--QIFTDVVGSPYYVAPEVLLK-----------------------HYGPEA 282 (564)
Q Consensus 228 p~NIll~~~~~~~~~kl~DfG~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-----------------------~~~~~~ 282 (564)
|+|||+. +..+.+||+|||++...... ......++++.|+|||.+.. .++.++
T Consensus 283 P~NILl~--~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 283 PQNIIFS--EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred HHHEEEe--CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999993 23578999999999865432 22345688999999997641 133456
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC-------CC----------CCCCCCCHHHHHHHHHhcccCCC
Q 008475 283 DVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF-------ES----------DPWPLISDSAKDLIRKMLCSQPS 345 (564)
Q Consensus 283 DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~-------~~----------~~~~~~s~~~~~li~~~l~~dp~ 345 (564)
|||||||+||||+++..|+... .......+....... .. ......+....+||.+||++||.
T Consensus 361 DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 9999999999999977665322 111111111111000 00 00111234566999999999999
Q ss_pred CCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHhhhhhhHHHHHhHhhhhhcccCCCCCCCCHH
Q 008475 346 ERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFD 425 (564)
Q Consensus 346 ~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~~n~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~ 425 (564)
+|||+.++|+||||.+......... ..+...+ ... ....-.+-.+.+...+..-..+.+|.++..
T Consensus 440 kR~ta~e~L~Hpff~~~~~~~~~~~-~~~~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 504 (566)
T PLN03225 440 QRISAKAALAHPYFDREGLLGLSVM-QNLRLQL--FRA------------TQQDYGEAAAWVVFLMAKSGTEKEGGFTEA 504 (566)
T ss_pred cCCCHHHHhCCcCcCCCCccccccc-ccccccc--chh------------hHHHHHHHHHHHHHHHHhcCCCCCCCccHH
Confidence 9999999999999987544311100 0000000 000 000001122334445556677788889999
Q ss_pred HHHHHHHhhCCCCCHHHHHH--HHHhcCCCCCCccchhhhHHH
Q 008475 426 ELKAGLRRYGSTLKDTEIRD--LMDAADVDNSGTIDYGEFIAA 466 (564)
Q Consensus 426 el~~~l~~~~~~~~~~~~~~--~~~~~D~~~~g~I~~~eF~~~ 466 (564)
++..+...- ...+.+..+ +.+.++....|..++.+++.-
T Consensus 505 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (566)
T PLN03225 505 QLQELREKE--PKKKGSAQRNALASALRLQRKGVKTVARTVDE 545 (566)
T ss_pred HHHHhhhhc--CcchhhhhhhhHHHHHhhhhhhhhhhhhhhhc
Confidence 988877643 223333333 777778888888888887653
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=310.28 Aligned_cols=246 Identities=26% Similarity=0.387 Sum_probs=196.7
Q ss_pred ceeecccccccCCeEEEEEE----EccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CC
Q 008475 100 LYTLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SL 173 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~ 173 (564)
.|++.+.||+|+||.||+|. +..++..||+|.+... .....+.+.+|+++++.+. ||||+++++++.. ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRR 80 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCCeeEEEEEEccCCCC
Confidence 58899999999999999997 3457889999998643 3455677899999999997 9999999998643 45
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 174 CVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
.+++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTKV 157 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCccccc
Confidence 689999999999999998764 468999999999999999999999999999999999999 7778899999999987
Q ss_pred cCCCCce----ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH----------------HHHH
Q 008475 253 FKPGQIF----TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ----------------GIFD 311 (564)
Q Consensus 253 ~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~----------------~~~~ 311 (564)
....... ....++..|+|||++.+ .++.++|||||||++|||++|..|+...... .+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 6433211 11223446999999874 5899999999999999999988776433211 0111
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 312 AVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 312 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+..+ ..+ +....++.++.+||.+||..+|++|||+.+|++
T Consensus 238 ~~~~~-~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 238 LLKNN-GRL--PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHhcC-CcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 11111 111 122457899999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=308.16 Aligned_cols=237 Identities=18% Similarity=0.199 Sum_probs=190.9
Q ss_pred ccccccCCeEEEEEEEccCC----------cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 105 RKLGQGQFGTTYLCTEIATG----------IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+.||+|+||.||+|.+..++ ..+++|.+.... .....+.+|+.+++.+. ||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLS-HKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCC-CcchhheeeEEec-CC
Confidence 46999999999999988776 357888765432 11567889999999997 9999999999888 77
Q ss_pred EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC----CCCcEEEeeCCC
Q 008475 175 VHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD----DDFSLKAIDFGL 249 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~----~~~~~kl~DfG~ 249 (564)
.++||||+++++|.+++...+ .++...+..++.||+.||.|||++||+||||||+|||+.... ....+||+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 899999999999999998766 789999999999999999999999999999999999994321 112799999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCC
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPW 325 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 325 (564)
+..... .....++..|+|||++.+ .++.++|||||||++|+|++ |..||...+............ ..+.
T Consensus 155 a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~-~~~~--- 227 (259)
T cd05037 155 PITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH-RLPM--- 227 (259)
T ss_pred cccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCC-CCCC---
Confidence 886543 223456778999999874 48899999999999999999 588887765444333332211 1111
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.....+.++|.+||..+|.+|||+.++++
T Consensus 228 -~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 228 -PDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred -CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 12378999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=330.41 Aligned_cols=275 Identities=25% Similarity=0.427 Sum_probs=228.7
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-----C
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-----S 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-----~ 172 (564)
.+.|++...||.|.+|.||+++++.+++.+|+|+..... +.-+.+..|.++|+.++.|||++.++++|.. +
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 355899999999999999999999999999999886543 3345677899999999999999999999963 5
Q ss_pred CeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 173 LCVHIVMELCAGGELFDRIIQ--RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
+.+|||||||.||+..++++. ..++.|..+..|++.++.|+.+||.+.++|||||-.|||+ +.++.|||+|||.+
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL---T~e~~VKLvDFGvS 170 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL---TENAEVKLVDFGVS 170 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE---eccCcEEEeeeeee
Confidence 789999999999999998865 3568999999999999999999999999999999999999 67889999999998
Q ss_pred cccCCC-CceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC
Q 008475 251 VFFKPG-QIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD 323 (564)
Q Consensus 251 ~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 323 (564)
...... ....+.+|||.|||||++. ..|+..+|+||||++..||.-|.+|+.+.-+...+-.|-+.. +....
T Consensus 171 aQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNP-PPkLk 249 (953)
T KOG0587|consen 171 AQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP-PPKLK 249 (953)
T ss_pred eeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCC-Ccccc
Confidence 766543 2345689999999999995 237889999999999999999999998888765555443321 11222
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhhhhH
Q 008475 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNK 386 (564)
Q Consensus 324 ~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~~n~ 386 (564)
.+...+.++.+||..||.+|-++||+..++|.|||+++.. +..++...++.....+.
T Consensus 250 rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~------~e~qir~~ik~~~~~~r 306 (953)
T KOG0587|consen 250 RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP------NERQVRIQIKDHIDRSR 306 (953)
T ss_pred chhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc------cHHHHHHHHHHHHhhcc
Confidence 3456789999999999999999999999999999998422 44555556665555544
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=312.41 Aligned_cols=250 Identities=15% Similarity=0.137 Sum_probs=188.6
Q ss_pred ccccceeecccccccCCeEEEEEEEccC---CcEEEEEEeccccCCCHHhH--------HHHHHHHHHHHhhcCCCCccE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIAT---GIEFACKSISKRKLISREDV--------EDVRREIQIMHHLAGHKNIVT 164 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~--------~~~~~E~~~l~~l~~h~niv~ 164 (564)
....+|++.++||+|+||.||+|.+..+ +..+|+|+............ .....++..+..+. |+||++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-h~~i~~ 87 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNID-HLGIPK 87 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCC-CCCCCc
Confidence 4456799999999999999999998877 66778876432221110000 01122333444554 999999
Q ss_pred EEEEEecCC----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCC
Q 008475 165 IKGAYEDSL----CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240 (564)
Q Consensus 165 ~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~ 240 (564)
+++++.... ..++++|++ ..++.+.+......++..+..++.|++.||.|||+++|+||||||+|||+ +.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill---~~~~ 163 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKL-VENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV---DGNN 163 (294)
T ss_pred EEEeeeEecCCceEEEEEEehh-ccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCC
Confidence 998765443 457888887 44676666655567889999999999999999999999999999999999 6778
Q ss_pred cEEEeeCCCccccCCCC--------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HH--
Q 008475 241 SLKAIDFGLSVFFKPGQ--------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ-QG-- 308 (564)
Q Consensus 241 ~~kl~DfG~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~-- 308 (564)
.++|+|||++....... ......||+.|+|||++.+ .++.++|||||||++|||++|..||.+... ..
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 89999999987653211 1123469999999999875 589999999999999999999999987632 22
Q ss_pred ------HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 309 ------IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 309 ------~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+..+.++.. ..+.+++++.+++..|+..+|++||++.++++
T Consensus 244 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 244 HAAKCDFIKRLHEGKI-----KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHhHHHHHHHhhhhhh-----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 2233333322 22456899999999999999999999999875
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=317.62 Aligned_cols=248 Identities=27% Similarity=0.403 Sum_probs=212.1
Q ss_pred cccceeecccccccCCeEEEEEEEcc--CCc--EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIA--TGI--EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
-++..++.+.||+|-||.||+|.-.. .|+ .||||.-+... ..+..+.+..|.-+|+.+. ||||++++|++.+
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfd-HphIikLIGv~~e- 462 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFD-HPHIIKLIGVCVE- 462 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCC-Ccchhheeeeeec-
Confidence 34556778899999999999998432 233 58888765433 4556889999999999997 9999999999876
Q ss_pred CeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 173 LCVHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
...|||||+++-|.|..+|+.++ .++......++.||+.||.|||+.++|||||-..|||+ .....|||+|||+++
T Consensus 463 ~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLV---sSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 463 QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILV---SSPQCVKLADFGLSR 539 (974)
T ss_pred cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheee---cCcceeeecccchhh
Confidence 46899999999999999998764 58899999999999999999999999999999999999 455589999999999
Q ss_pred ccCCCCceecccCC--Ccccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 252 FFKPGQIFTDVVGS--PYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 252 ~~~~~~~~~~~~gt--~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
......++....|. ..|||||.++ +.++.+||||-|||.+||++. |..||.+-.+.+++-.+.+|..... .+.
T Consensus 540 ~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~---P~n 616 (974)
T KOG4257|consen 540 YLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPC---PPN 616 (974)
T ss_pred hccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCC---CCC
Confidence 98877766655554 3699999997 789999999999999999877 9999999999888888888865433 357
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHh
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVL 354 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl 354 (564)
+|+.+..|+.+||..||.+||.+.++.
T Consensus 617 CPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 617 CPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred CChHHHHHHHHHhccCcccCCcHHHHH
Confidence 999999999999999999999987654
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=306.89 Aligned_cols=248 Identities=23% Similarity=0.340 Sum_probs=202.7
Q ss_pred eeecccccccCCeEEEEEEEc---cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC----
Q 008475 101 YTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL---- 173 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---- 173 (564)
|.+.+.||+|+||.||+|.+. .++..||+|++.... ......+.+.+|+.+++.+. ||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFD-HPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCCCCc
Confidence 567889999999999999864 357899999996543 34455677889999999997 999999999886432
Q ss_pred --eEEEEEeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEe
Q 008475 174 --CVHIVMELCAGGELFDRIIQR------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAI 245 (564)
Q Consensus 174 --~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~ 245 (564)
..++++||+.+|+|..++... ..++...+..++.||+.||.|||++||+||||||+||++ +.++.+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili---~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE---cCCCCEEEC
Confidence 357899999999998877532 247889999999999999999999999999999999999 677889999
Q ss_pred eCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccC
Q 008475 246 DFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDF 320 (564)
Q Consensus 246 DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~ 320 (564)
|||++........ .....+++.|++||.+.+ .++.++|||||||++|+|++ |.+||.+.+..+....+..+....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLK 235 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCC
Confidence 9999886543321 122345578999999874 58889999999999999999 899998888777777766543221
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 321 ~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
..+.+++.+.+++.+||..+|++|||+.+++.+
T Consensus 236 ---~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 236 ---QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 123578899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=303.71 Aligned_cols=243 Identities=21% Similarity=0.289 Sum_probs=192.6
Q ss_pred cccccCCeEEEEEEEccCC--cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 106 KLGQGQFGTTYLCTEIATG--IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 106 ~lG~G~fg~V~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
.||+|+||.||+|.....+ ..+++|.+.... .....+.+.+|+.+++.+. ||||+++++.+.+....|+||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQ-HPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccC-CcchhheEEEecCCCccEEEEecCC
Confidence 6999999999999754332 346677665432 2344567899999999997 9999999999999999999999999
Q ss_pred CCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 184 GGELFDRIIQR----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 184 ~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
+|+|.+++.+. ...++..+..++.||+.||.|||+++++||||||+|||+ +.++.+||+|||++.......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~---~~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL---TSDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE---cCCccEEecccccccccCcchhh
Confidence 99999998753 235677888999999999999999999999999999999 677899999999976432211
Q ss_pred -ceecccCCCcccchhhhhh--------cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCc-cCCC-CCC
Q 008475 258 -IFTDVVGSPYYVAPEVLLK--------HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHI-DFES-DPW 325 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~~--------~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~-~~~ 325 (564)
......++..|+|||++.. .++.++|||||||++|||++ |..||......+.+..+.++.. .... ...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE 235 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC
Confidence 1234567889999998742 35778999999999999997 5778887777776666544322 2111 122
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
..+++.+.+++..|| .+|++||++++|++
T Consensus 236 ~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 236 LPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred CCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 347889999999999 67999999999865
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=307.55 Aligned_cols=248 Identities=25% Similarity=0.416 Sum_probs=201.0
Q ss_pred cceeecccccccCCeEEEEEEEc----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--C
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--S 172 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~ 172 (564)
+.|++.+.||+|+||.||+|... .++..||+|++..... ....+.+.+|+++++.+. ||||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~ei~~l~~l~-~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE--EQHRSDFEREIEILRTLD-HENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc--hHHHHHHHHHHHHHHhCC-CCChheEEeeeecCCC
Confidence 34788899999999999999864 3478999999975432 245678999999999997 9999999999877 6
Q ss_pred CeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 173 LCVHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
...++||||+++++|.+++.... .+++..+..++.||+.||.|||++|++||||||+||++ +.++.++|+|||++.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~ 157 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLAK 157 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEccccccc
Confidence 68999999999999999997654 58999999999999999999999999999999999999 677899999999998
Q ss_pred ccCCCCce----ecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHH---------------HHHH
Q 008475 252 FFKPGQIF----TDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQ---------------GIFD 311 (564)
Q Consensus 252 ~~~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~---------------~~~~ 311 (564)
........ ....++..|+|||.+. ..++.++|||||||++|+|++|..|+...... ...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 76533211 1223455799999887 45889999999999999999999998653221 1222
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 312 AVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 312 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+..+ ...+ ....++.++.+|+.+||..+|.+|||+.+|++
T Consensus 238 ~~~~~-~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 238 LLKEG-ERLP--RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHcC-CcCC--CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 22222 2222 12356789999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=293.05 Aligned_cols=255 Identities=27% Similarity=0.475 Sum_probs=212.4
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS---- 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---- 172 (564)
...+|.-.+.+|.|.- .|..|-+.-.++.||+|.+... +.+....++..+|+.++..+. |+||++++.+|...
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~-~~nii~l~n~ftP~~~l~ 91 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVN-HKNIISLLNVFTPQKTLE 91 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhc-ccceeeeeeccCccccHH
Confidence 4456888899999998 7888889999999999998655 555666778899999999997 99999999999643
Q ss_pred --CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 173 --LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 173 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
..+|+|||+| ..+|.+.+. -.+.-..+..++.|++.|+.|||+.||+||||||+||++ ..+..+||+|||+|
T Consensus 92 ~~~e~y~v~e~m-~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 92 EFQEVYLVMELM-DANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGLA 165 (369)
T ss_pred HHHhHHHHHHhh-hhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchhh
Confidence 4589999999 668988876 347889999999999999999999999999999999999 77889999999999
Q ss_pred cccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-------------
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG------------- 316 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~------------- 316 (564)
+.....-..+.++.|+.|+|||++.+ .|...+||||+||++.||++|...|.+.+..+.+.++...
T Consensus 166 r~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~ 245 (369)
T KOG0665|consen 166 RTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ 245 (369)
T ss_pred cccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence 98766656788999999999999986 4999999999999999999999999887765444333210
Q ss_pred ---------C-----cc----CCCCCC-------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 317 ---------H-----ID----FESDPW-------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 317 ---------~-----~~----~~~~~~-------~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
. .. ++...| +.-+..+++|+.+||..||++|.|++++|+|||++
T Consensus 246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 0 00 010011 11245789999999999999999999999999997
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=318.28 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=215.8
Q ss_pred cceeecccccccCCeEEEEEEEccCC---cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATG---IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+...+.++||+|+||+|++|.|...+ ..||||.+..... ......|.+|+.+|.+|+ |||+++|||+..+ ..+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l--~~~mddflrEas~M~~L~-H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSL--NAIMDDFLREASHMLKLQ-HPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCcc--chhHHHHHHHHHHHHhcc-CcceeEEeeeecc-chh
Confidence 34677889999999999999987533 3699999976543 226788999999999998 9999999999877 778
Q ss_pred EEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 176 HIVMELCAGGELFDRIIQ--RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.+|||+++.|+|++.|.+ ...|.......++.||+.|+.||.++++|||||-..|||+. ....|||||||+.+.+
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla---sprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA---SPRTVKICDFGLMRAL 262 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec---ccceeeeecccceecc
Confidence 899999999999999987 34588899999999999999999999999999999999995 4558999999999987
Q ss_pred CCCCceeccc----CCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 254 KPGQIFTDVV----GSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 254 ~~~~~~~~~~----gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
..++...... -...|+|||.++ +.++.++|||++||++|||+| |+.||.+.....+++.|.++.... ..+.
T Consensus 263 g~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLp---RPk~ 339 (1039)
T KOG0199|consen 263 GENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLP---RPKY 339 (1039)
T ss_pred CCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCC---CCCC
Confidence 7655433222 234799999998 679999999999999999999 899999999999999998654332 2256
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+|+.+.+++..||..+|.+|||+..|.+.-+..+.
T Consensus 340 csedIY~imk~cWah~paDRptFsair~~~~l~ea 374 (1039)
T KOG0199|consen 340 CSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEA 374 (1039)
T ss_pred ChHHHHHHHHHhccCCccccccHHHHHHhHHHHhc
Confidence 89999999999999999999999998766665543
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=325.64 Aligned_cols=248 Identities=23% Similarity=0.387 Sum_probs=217.9
Q ss_pred ceeecccccccCCeEEEEEEEccCCc---EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGI---EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
...|.++||.|.||.|++|+.+..|+ .||||.++... .+.....|..|..||-++. ||||++|.|+......+.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFd-HPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFD-HPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCC-CCcEEEEEEEEecCceeE
Confidence 36788899999999999999887664 69999997543 5666778999999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||+|||++|+|..+|.++ +.|+..++..+++.|+.|+.||-+.|+|||||...|||| +.+..+|++|||+++....
T Consensus 707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeeccc
Confidence 999999999999999764 679999999999999999999999999999999999999 8889999999999998754
Q ss_pred CC--ceecccC--CCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 256 GQ--IFTDVVG--SPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 256 ~~--~~~~~~g--t~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
+. .+++.-| ..+|.|||.+. ++++.+|||||+||++||.++ |+.||+..+++++++.|.+|-... +...+|
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLP---pPmDCP 860 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLP---PPMDCP 860 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCC---CCCCCc
Confidence 43 2222222 35899999987 789999999999999999887 999999999999999998875433 335789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
..+.+|+..||++|-.+||.+.||+.+
T Consensus 861 ~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 861 AALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 999999999999999999999998764
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=309.33 Aligned_cols=268 Identities=24% Similarity=0.345 Sum_probs=226.9
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
..+...+||.|.||.||.|.++.-.-.||||.++.. ...++.|..|..+|+.++ |||+|+|+|+|..+..+|||+
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeik-HpNLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhc-CccHHHHhhhhccCCCeEEEE
Confidence 356678999999999999999999999999998653 345788999999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 180 ELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||..|+|+++|.... .++.-....++.||..|++||..+++|||||-..|+|| .++..||+.|||+++.+..+.
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV---gEnhiVKvADFGLsRlMtgDT 419 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHIVKVADFGLSRLMTGDT 419 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc---cccceEEeeccchhhhhcCCc
Confidence 9999999999997643 36778889999999999999999999999999999999 788899999999999876544
Q ss_pred ceecccC---CCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 258 IFTDVVG---SPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 258 ~~~~~~g---t~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
++...| ...|.|||.+. ..++.|+|||+|||+|||+.| |-.||.+.+..+++..+.++-.. +....|++..
T Consensus 420 -YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM---~~PeGCPpkV 495 (1157)
T KOG4278|consen 420 -YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRM---DGPEGCPPKV 495 (1157)
T ss_pred -eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccc---cCCCCCCHHH
Confidence 344343 34699999886 679999999999999999999 88999999999999988776433 2335799999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhh
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSA 383 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~ 383 (564)
.+|++.||+|.|.+||++.++-+ -|.. .....+++.++..++.+...
T Consensus 496 YeLMraCW~WsPsDRPsFaeiHq--afEt--mf~~sSisdEV~keLgk~~~ 542 (1157)
T KOG4278|consen 496 YELMRACWNWSPSDRPSFAEIHQ--AFET--MFSSSSISDEVQKELGKNND 542 (1157)
T ss_pred HHHHHHHhcCCcccCccHHHHHH--HHHH--HhccccccHHHHHHHhhccc
Confidence 99999999999999999998733 2322 33456677777777654443
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=289.82 Aligned_cols=257 Identities=24% Similarity=0.403 Sum_probs=211.8
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-----eE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-----CV 175 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-----~~ 175 (564)
.+-.+.||-|+||+||.+.+..+|+.||+|++..- +.+-...+++.+|+.+|..++ |.|++..+++.+... .+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHHHH
Confidence 34467899999999999999999999999988642 234455678889999999998 999999998876543 46
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|+|+|++ ..+|...+.....++...++-+++||+.||.|||+.+|.||||||.|+|+ +.+..+||||||+++....
T Consensus 133 YV~TELm-QSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 133 YVLTELM-QSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHH-HhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccccch
Confidence 8899998 56888888777889999999999999999999999999999999999999 7888999999999997665
Q ss_pred CC--ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc----------------
Q 008475 256 GQ--IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK---------------- 315 (564)
Q Consensus 256 ~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~---------------- 315 (564)
.+ ..+..+.|..|+|||++++ +|+.+.||||.|||+.||+.++..|...++.+.++.|..
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 43 3445667889999999995 699999999999999999999999988887776666532
Q ss_pred -------CCccCCC-CCCC------CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 316 -------GHIDFES-DPWP------LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 316 -------~~~~~~~-~~~~------~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+....+. .... .-..+..+++.++|..||++|.+..+++.|+|..+..
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 1111111 0000 1224678899999999999999999999999998753
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=288.00 Aligned_cols=242 Identities=46% Similarity=0.730 Sum_probs=208.7
Q ss_pred CCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCCchHHH
Q 008475 111 QFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDR 190 (564)
Q Consensus 111 ~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 190 (564)
+||.||+|.+..+++.+|+|++........ .+.+.+|++.++++. |+||+++++.+......++++||+++++|.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLK-HPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCC-CCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 589999999988899999999875543221 578899999999996 99999999999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecccCCCcccc
Q 008475 191 IIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVA 270 (564)
Q Consensus 191 l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~a 270 (564)
+.....++...+..++.+++.++.+||+.+++|+||+|+||++ +.++.++|+|||.+.............++..|+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 154 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL---DEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMA 154 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE---CCCCcEEEccccceeeeccccccccccCCcCCCC
Confidence 8877668999999999999999999999999999999999999 6668999999999988765544556778899999
Q ss_pred hhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 008475 271 PEVLL-KHYGPEADVWTAGVILYILLSGVPPFWA-ETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL 348 (564)
Q Consensus 271 PE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~ 348 (564)
||.+. ..++.++||||+|+++|+|++|..||.. .......+.+..+....... ...++.++.+++.+||..+|++||
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~Rp 233 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPP-EWKISPEAKDLIRKLLVKDPEKRL 233 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccc-cccCCHHHHHHHHHHccCCchhcc
Confidence 99987 4588899999999999999999999987 55566666665544433221 122788999999999999999999
Q ss_pred CHHHHhcCCCc
Q 008475 349 TAHEVLCHPWI 359 (564)
Q Consensus 349 s~~~vl~hp~~ 359 (564)
++.++++||||
T Consensus 234 ~~~~~~~~~~~ 244 (244)
T smart00220 234 TAEEALQHPFF 244 (244)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=311.74 Aligned_cols=258 Identities=23% Similarity=0.290 Sum_probs=188.4
Q ss_pred ccceeecccccccCCeEEEEEEEc----------------cCCcEEEEEEeccccCCCHH-----------hHHHHHHHH
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEI----------------ATGIEFACKSISKRKLISRE-----------DVEDVRREI 150 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~----------------~~~~~vavK~~~~~~~~~~~-----------~~~~~~~E~ 150 (564)
.+.|.+.++||+|+||+||+|... ..++.||||++......... ..+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 467999999999999999999742 34567999998643211000 112234577
Q ss_pred HHHHhhcCCCC-----ccEEEEEEec--------CCeEEEEEeccCCCchHHHHHhcC----------------------
Q 008475 151 QIMHHLAGHKN-----IVTIKGAYED--------SLCVHIVMELCAGGELFDRIIQRG---------------------- 195 (564)
Q Consensus 151 ~~l~~l~~h~n-----iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~---------------------- 195 (564)
.++.+++ |.+ +++++++|.. ....+|||||+++++|.+++....
T Consensus 224 ~~l~~l~-~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 224 YMCAKIK-RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHhh-cccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 7777776 444 4667777643 356899999999999999886421
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceec--ccCCCcccch
Q 008475 196 --HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD--VVGSPYYVAP 271 (564)
Q Consensus 196 --~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~--~~gt~~y~aP 271 (564)
.+++..++.++.|++.||.|||+.+|+||||||+|||+ +.++.+||+|||++........... ..+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV---TVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE---CCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 23456788999999999999999999999999999999 6678899999999976543332222 2347899999
Q ss_pred hhhhhc---------------------CC--CcchHHHHHHHHHHHHhCCC-CCCCCCH-----------HHHHHHHHcC
Q 008475 272 EVLLKH---------------------YG--PEADVWTAGVILYILLSGVP-PFWAETQ-----------QGIFDAVLKG 316 (564)
Q Consensus 272 E~~~~~---------------------~~--~~~DvwSlG~il~elltg~~-pf~~~~~-----------~~~~~~i~~~ 316 (564)
|.+... |+ .+.||||+||++|+|++|.. ||..... ......+...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 987521 11 24799999999999999986 7643211 1111222223
Q ss_pred CccCCCCCCCCCCHHHHHHHHHhcccCC---CCCCCHHHHhcCCCcCC
Q 008475 317 HIDFESDPWPLISDSAKDLIRKMLCSQP---SERLTAHEVLCHPWICE 361 (564)
Q Consensus 317 ~~~~~~~~~~~~s~~~~~li~~~l~~dp---~~R~s~~~vl~hp~~~~ 361 (564)
... ...+..+++.+++|+.+||..+| .+|+|++|+|+||||..
T Consensus 460 ~~~--~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 460 KYD--FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred CCC--cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 333 33456789999999999999876 68999999999999964
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=319.20 Aligned_cols=250 Identities=30% Similarity=0.448 Sum_probs=201.7
Q ss_pred eeecccccccCCeE-EEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 101 YTLGRKLGQGQFGT-TYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 101 y~~~~~lG~G~fg~-V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
|.-.+++|.|+-|+ ||+|. ..|+.||||++.. +....+.+|+..|+.-..|||||++++.-.+....||+.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGV--YEGREVAVKRLLE------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEe--eCCceehHHHHhh------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44467899998886 78888 5788999998853 345667899999999999999999999999999999999
Q ss_pred eccCCCchHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC--CCCCcEEEeeCCCcccc
Q 008475 180 ELCAGGELFDRIIQRGH----YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK--DDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~--~~~~~~kl~DfG~~~~~ 253 (564)
|+| ..+|.+++...+. ......+.++.|++.||++||+.+||||||||.|||+..+ +....++|+|||+++..
T Consensus 583 ELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 999 6799999977411 1114568899999999999999999999999999999754 33468999999999987
Q ss_pred CCCC----ceecccCCCcccchhhhhhc-CCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 254 KPGQ----IFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSG-VPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 254 ~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
..+. ...+..||.+|+|||++... -+.++||||+||++|+.++| ..||...-. --.+|+++......-. +.
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~~~~L~~L~-~~ 738 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTGNYTLVHLE-PL 738 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcCccceeeec-cC
Confidence 6554 23457899999999999854 66789999999999999996 899955433 2345666665443211 11
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
-..++.+||.+|++++|..||++.+||.||+|...
T Consensus 739 ~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 739 PDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred chHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 12289999999999999999999999999999763
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=261.20 Aligned_cols=212 Identities=26% Similarity=0.338 Sum_probs=180.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+....+..||+|++|.|-+.++..+|...|+|.+...- +....+++.+|+.+..+...+|.+|.++|.+.+...++|.
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc 123 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC 123 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence 44556778999999999999999999999999997544 4556678889999999888899999999999999999999
Q ss_pred EeccCCCchHH----HHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 179 MELCAGGELFD----RIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 179 ~e~~~~~~L~~----~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
||.| .-+|.. .+.+.+.++|..+-+|+..++.||.|||+ ..+||||+||+|||+ +..|.+|+||||.+...
T Consensus 124 ME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 124 MELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGYL 199 (282)
T ss_pred HHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccceee
Confidence 9999 446643 33446789999999999999999999998 489999999999999 88999999999999877
Q ss_pred CCCCceecccCCCcccchhhhhh-----cCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcC
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLK-----HYGPEADVWTAGVILYILLSGVPPFWA-ETQQGIFDAVLKG 316 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~ 316 (564)
..+-..+--.|-..|||||.+.. .|+.++||||||+++.||.+++.||.. .++.+.+.++.+.
T Consensus 200 ~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 200 VDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred hhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 65443333567789999999962 489999999999999999999999964 5666667766553
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=306.16 Aligned_cols=260 Identities=28% Similarity=0.440 Sum_probs=227.4
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+.+++|++...+|.|+||.||+|+++.+++..|+|+++-. ....+.-+.+|+-+++..+ |||||.+++.|-....+
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~-h~nivay~gsylr~dkl 87 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKL 87 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCC-CcChHHHHhhhhhhcCc
Confidence 4567799999999999999999999999999999999654 3455677889999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||+||||.||+|.+.-+-.+++++.++..+++..+.||+|||++|=+|||||-.|||+ .+.|.+|+.|||.+..+..
T Consensus 88 wicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill---td~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL---TDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceee---cccCceeecccCchhhhhh
Confidence 9999999999999988888999999999999999999999999999999999999999 7788999999999866543
Q ss_pred C-CceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC-CCCCCCC
Q 008475 256 G-QIFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES-DPWPLIS 329 (564)
Q Consensus 256 ~-~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~s 329 (564)
. .....++||+.|||||+.. +.|...+|||++|++..|+---++|-...-+...+..+.+..++.+. ......+
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws 244 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWS 244 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccch
Confidence 2 2345689999999999875 46999999999999999999989998777777777766665555442 2234578
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+.+-+|++.+|.++|++||+++.+|.|||+...
T Consensus 245 ~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 245 EFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred HHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 899999999999999999999999999999753
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=286.90 Aligned_cols=257 Identities=28% Similarity=0.456 Sum_probs=203.2
Q ss_pred cccccceeecccccccCCeEEEEEEEcc---CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..+...|.++.+||+|+|++||++.+.. ..+.||+|.+.... ...++.+|+++|..+.++.||+++.+++..
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 3455669999999999999999999877 78899999986432 345688999999999999999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
++.+++|+||++.....++.. .++...++.+++.++.||.++|.+|||||||||+|+|+.. ..+.-.|+|||+|.
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~--~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR--RTQRGVLVDFGLAQ 181 (418)
T ss_pred CCeeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc--ccCCceEEechhHH
Confidence 999999999999988877664 4778999999999999999999999999999999999963 34567889999976
Q ss_pred ccC-----------------C-----------------CC-----------ceecccCCCcccchhhhhh--cCCCcchH
Q 008475 252 FFK-----------------P-----------------GQ-----------IFTDVVGSPYYVAPEVLLK--HYGPEADV 284 (564)
Q Consensus 252 ~~~-----------------~-----------------~~-----------~~~~~~gt~~y~aPE~~~~--~~~~~~Dv 284 (564)
... + .. ......||++|+|||++.+ ..++++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 110 0 00 0112579999999999984 58899999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCHH-HHHHHH--------------HcCCc-------------------c-----------
Q 008475 285 WTAGVILYILLSGVPPFWAETQQ-GIFDAV--------------LKGHI-------------------D----------- 319 (564)
Q Consensus 285 wSlG~il~elltg~~pf~~~~~~-~~~~~i--------------~~~~~-------------------~----------- 319 (564)
||.|||+.-+++++.||...... +.+..| .-|.+ .
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 99999999999999999542211 100000 00110 0
Q ss_pred ---CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 320 ---FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 320 ---~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
........++..+.+|+.+||..||.+|+|++++|.||||..
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 000011224558899999999999999999999999999984
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=307.46 Aligned_cols=249 Identities=23% Similarity=0.401 Sum_probs=210.3
Q ss_pred cceeecccccccCCeEEEEEEEc---c----CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI---A----TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~---~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
+...+.+.||+|.||.|++|.-. . ....||||.++... .....+.+..|+.+|+.+..||||+.+++++..
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~--~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA--SSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc--CcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 33466779999999999999733 1 14579999987554 336678899999999999999999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeec
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN 235 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~ 235 (564)
...+++|+||+..|+|.+++...+ .++......++.||+.|++||++.++|||||-..|||+
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi-- 451 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI-- 451 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe--
Confidence 999999999999999999998766 38889999999999999999999999999999999999
Q ss_pred CCCCCcEEEeeCCCccccCCCCceec--ccC--CCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCC-HHH
Q 008475 236 KDDDFSLKAIDFGLSVFFKPGQIFTD--VVG--SPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAET-QQG 308 (564)
Q Consensus 236 ~~~~~~~kl~DfG~~~~~~~~~~~~~--~~g--t~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~-~~~ 308 (564)
..+..+||+|||+|+.......+.. ..+ ...|||||.+.. .|+.++||||+||+|||+.| |..||.+-. ..+
T Consensus 452 -~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~ 530 (609)
T KOG0200|consen 452 -TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE 530 (609)
T ss_pred -cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence 6778999999999997665554432 222 235999999985 69999999999999999999 899998855 667
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+++.+..|.....+ ..+++++.++++.||+.+|++||++.++..
T Consensus 531 l~~~l~~G~r~~~P---~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 531 LLEFLKEGNRMEQP---EHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHhcCCCCCCC---CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 77777777654332 357999999999999999999999988754
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=295.37 Aligned_cols=245 Identities=23% Similarity=0.313 Sum_probs=209.1
Q ss_pred eeecccccccCCeEEEEEEEccCCc----EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGI----EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
.+..++||.|+||+||+|.+...|+ +||+|++.... .......+..|.-+|.+|. |||+++|++++.... +-
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masld-Hpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASLD-HPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcCC-CchHHHHhhhcccch-HH
Confidence 3447889999999999999876665 58999886443 4455678899999999997 999999999998766 88
Q ss_pred EEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||++|+++|+|.++++.. ..+..+....|+.||+.|+.|||.++++||||-..|||| .....+||.|||+++...+
T Consensus 774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecchhhccCc
Confidence 999999999999999764 578999999999999999999999999999999999999 5666899999999998876
Q ss_pred CCcee-cc--cCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 256 GQIFT-DV--VGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 256 ~~~~~-~~--~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
..... .. .-.+.|||-|.+. +.|+.++|||||||++||++| |..||.+....++-+.+.+|.. ++.+ +.++-
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-LsqP--piCti 927 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-LSQP--PICTI 927 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-CCCC--CCccH
Confidence 54222 11 2235689999887 569999999999999999999 9999999999999998888876 3333 56889
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++.-++.+||..|+..||+++++..
T Consensus 928 DVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 928 DVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HHHHHHHHHhccCcccCccHHHHHH
Confidence 9999999999999999999988754
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=288.43 Aligned_cols=199 Identities=32% Similarity=0.523 Sum_probs=178.7
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhH-----HHHHHHHHHHHhhc--CCCCccEEEEEEecCC
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDV-----EDVRREIQIMHHLA--GHKNIVTIKGAYEDSL 173 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~-----~~~~~E~~~l~~l~--~h~niv~~~~~~~~~~ 173 (564)
|...+.+|+|+||.|++|.++....+|+||.|.+..+.-...+ -.+-.||+||..|. .|+||++++++|++++
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd 642 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD 642 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC
Confidence 8999999999999999999999999999999987665332222 23567999999986 4999999999999999
Q ss_pred eEEEEEecc-CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 174 CVHIVMELC-AGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
.+||+||.- +|.+|+++|..++.++|.++..|++|++.|+++||+.||||||||-+||.+ +.+|.+||+|||.|..
T Consensus 643 ~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 643 YYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSAAY 719 (772)
T ss_pred eeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccchhh
Confidence 999999986 567999999999999999999999999999999999999999999999999 8999999999999988
Q ss_pred cCCCCceecccCCCcccchhhhhhc--CCCcchHHHHHHHHHHHHhCCCCCCC
Q 008475 253 FKPGQIFTDVVGSPYYVAPEVLLKH--YGPEADVWTAGVILYILLSGVPPFWA 303 (564)
Q Consensus 253 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~pf~~ 303 (564)
...+ .+..++||..|.|||++.|. .+...|||++|++||-++..+.||+.
T Consensus 720 ~ksg-pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 720 TKSG-PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hcCC-CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 7654 46778999999999999864 57789999999999999999999864
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=327.15 Aligned_cols=239 Identities=23% Similarity=0.261 Sum_probs=184.0
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|...+.||+|+||.||+|++..++..||+|.+..... ....|++++++++ |||||++++++.+....|+||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~-HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQ-HPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCC-CCCcceEEEEEEcCCCCEEEE
Confidence 35667789999999999999989999999998864321 1124688899997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||+++|+|.+++. .+++..+..++.||+.||+||| +.+|+||||||+||++ +.++..++. ||.+......
T Consensus 763 Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~---~~~~~~~~~-~~~~~~~~~~ 835 (968)
T PLN00113 763 EYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII---DGKDEPHLR-LSLPGLLCTD 835 (968)
T ss_pred eCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE---CCCCceEEE-eccccccccC
Confidence 9999999999885 4889999999999999999999 6799999999999999 666666665 6655432211
Q ss_pred CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH---cC-----CccCCC---
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ--QGIFDAVL---KG-----HIDFES--- 322 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~--~~~~~~i~---~~-----~~~~~~--- 322 (564)
....+|+.|+|||++.+ .++.++|||||||++|||+||+.||..... ..+.+... .. ......
T Consensus 836 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (968)
T PLN00113 836 ---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD 912 (968)
T ss_pred ---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCC
Confidence 23467899999999874 599999999999999999999999853221 11111110 00 000000
Q ss_pred -CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 323 -DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 323 -~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
........++.+++.+||+.||++|||+.+|++.
T Consensus 913 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 913 VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 0000112356789999999999999999999765
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=258.78 Aligned_cols=245 Identities=24% Similarity=0.401 Sum_probs=197.3
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEE-EEecCCe
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKG-AYEDSLC 174 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~-~~~~~~~ 174 (564)
.+.+.|.|.+.||+|.||.+.+|.++.++..+++|.+.+.. ...+.+.+|..---.|..|.||+.-|+ .|+..+.
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCce
Confidence 46688999999999999999999999999999999987643 345678889988888888999998765 4778888
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+++++||++.|+|...+.. ..+.|.....++.|+++||.|||++++||||||.+|||+...| ...+||||||.++...
T Consensus 97 YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d-f~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD-FYRVKLCDFGLTRKVG 174 (378)
T ss_pred EEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC-ccEEEeeecccccccC
Confidence 9999999999999887765 3588999999999999999999999999999999999998654 3489999999987643
Q ss_pred CCCceecccCCCcccchhhhh----h--cCCCcchHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHcCCccCCCCC
Q 008475 255 PGQIFTDVVGSPYYVAPEVLL----K--HYGPEADVWTAGVILYILLSGVPPFWAET----QQGIFDAVLKGHIDFESDP 324 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~----~--~~~~~~DvwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~ 324 (564)
.. ....--+..|.|||+.. + ...+.+|||.||+++|.+|||.+||.... +---+.+-.++...-.+..
T Consensus 175 ~t--V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~ 252 (378)
T KOG1345|consen 175 TT--VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKK 252 (378)
T ss_pred ce--ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchh
Confidence 22 11222356799999875 2 25678999999999999999999996322 1112233333333334445
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCC
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERL 348 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~ 348 (564)
+..+++.+..+.++-|.++|++|.
T Consensus 253 F~~fs~~a~r~Fkk~lt~~~~drc 276 (378)
T KOG1345|consen 253 FNPFSEKALRLFKKSLTPRFKDRC 276 (378)
T ss_pred hcccCHHHHHHHHHhcCCcccccc
Confidence 667899999999999999999993
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-33 Score=271.71 Aligned_cols=238 Identities=24% Similarity=0.352 Sum_probs=187.0
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc-CCCCccEEEEEEecCC----eE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA-GHKNIVTIKGAYEDSL----CV 175 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~niv~~~~~~~~~~----~~ 175 (564)
.++..+||+|.||.||+|+. +++.||||++. ....+.+..|-.|..... .|+||+++++.-.... .+
T Consensus 212 l~l~eli~~Grfg~V~KaqL--~~~~VAVKifp------~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQL--DNRLVAVKIFP------EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred hhhHHHhhcCccceeehhhc--cCceeEEEecC------HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 55678999999999999994 56899999985 455678888888877432 3999999998766544 79
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---------CCEeecCCCCcEEeecCCCCCcEEEee
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL---------GVMHRDLKPENFLLVNKDDDFSLKAID 246 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---------~iiH~Dlkp~NIll~~~~~~~~~kl~D 246 (564)
+||+||-+.|+|.++|..+ .+++.....++..++.||+|||+- .|+|||||..|||| ..++...|+|
T Consensus 284 wLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIaD 359 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIAD 359 (534)
T ss_pred eEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEeec
Confidence 9999999999999999765 689999999999999999999963 49999999999999 7889999999
Q ss_pred CCCccccCCCC---ceecccCCCcccchhhhhhcC--C-----CcchHHHHHHHHHHHHhCCC------------CCC--
Q 008475 247 FGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLKHY--G-----PEADVWTAGVILYILLSGVP------------PFW-- 302 (564)
Q Consensus 247 fG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~--~-----~~~DvwSlG~il~elltg~~------------pf~-- 302 (564)
||+|..+.++. .....+||.+|||||++.+.. . .+.||||+|.+||||+++.. ||.
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 99998877554 233478999999999998642 2 25899999999999998543 332
Q ss_pred ---CCCHHHHHHHHHcCC--ccCCCCCCC--CCCHHHHHHHHHhcccCCCCCCCHH
Q 008475 303 ---AETQQGIFDAVLKGH--IDFESDPWP--LISDSAKDLIRKMLCSQPSERLTAH 351 (564)
Q Consensus 303 ---~~~~~~~~~~i~~~~--~~~~~~~~~--~~s~~~~~li~~~l~~dp~~R~s~~ 351 (564)
..+..++.+.+.+.+ ..++. .|. ....-+++.+..||..||+.|+|+.
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p~-~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIPD-AWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCChh-hhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 122334444444332 22221 221 1235688999999999999999985
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=263.66 Aligned_cols=245 Identities=24% Similarity=0.358 Sum_probs=187.4
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHh--hcCCCCccEEEEEEecC-
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH--LAGHKNIVTIKGAYEDS- 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~~h~niv~~~~~~~~~- 172 (564)
.+..+.++.+.||+|.||.||+|.+ .|+.||||++... +.+.+.+|.+|.+. |+ |+||+.+++.=..+
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLR-HENILgFIaaD~~~~ 278 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLR-HENILGFIAADNKDN 278 (513)
T ss_pred hhhheeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhc-cchhhhhhhccccCC
Confidence 3566788999999999999999995 5889999999643 23567777777763 65 99999999865433
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCEeecCCCCcEEeecCCCCCc
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL--------GVMHRDLKPENFLLVNKDDDFS 241 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~iiH~Dlkp~NIll~~~~~~~~ 241 (564)
-.+|||++|-+.|+|+++|.. ..++.+...+++..++.||.+||.. .|.|||||..|||| .+++.
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kkn~~ 354 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGT 354 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---ccCCc
Confidence 258999999999999999987 5799999999999999999999952 39999999999999 78889
Q ss_pred EEEeeCCCccccCCCC-----ceecccCCCcccchhhhhhcCC-------CcchHHHHHHHHHHHHhC----------CC
Q 008475 242 LKAIDFGLSVFFKPGQ-----IFTDVVGSPYYVAPEVLLKHYG-------PEADVWTAGVILYILLSG----------VP 299 (564)
Q Consensus 242 ~kl~DfG~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-------~~~DvwSlG~il~elltg----------~~ 299 (564)
..|+|+|+|....... ..+..+||.+|||||++..... ..+||||||.++||++-+ ++
T Consensus 355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~ 434 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQL 434 (513)
T ss_pred EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcC
Confidence 9999999998765431 3456899999999999974322 358999999999999763 46
Q ss_pred CCCCC-----CHHHHHHHHHcCCccC-CCCCCCCCC--HHHHHHHHHhcccCCCCCCCHHHH
Q 008475 300 PFWAE-----TQQGIFDAVLKGHIDF-ESDPWPLIS--DSAKDLIRKMLCSQPSERLTAHEV 353 (564)
Q Consensus 300 pf~~~-----~~~~~~~~i~~~~~~~-~~~~~~~~s--~~~~~li~~~l~~dp~~R~s~~~v 353 (564)
||++- +.+++.+-+--..+.+ .+..|...+ ..+..+++.||..||.-|.|+-.+
T Consensus 435 Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 435 PYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred CcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence 88642 2233333322222222 222232211 245678999999999999997544
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-31 Score=252.78 Aligned_cols=250 Identities=20% Similarity=0.251 Sum_probs=208.2
Q ss_pred cccceeecccccccCCeEEEEEEEccC-----CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIAT-----GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
-++++++..++-+|.||.||.|.++.. .+.|-+|.++... +.-+...+..|--++..+. |||+..+.++..+
T Consensus 282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~s-H~nll~V~~V~ie 358 (563)
T KOG1024|consen 282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGAS-HPNLLSVLGVSIE 358 (563)
T ss_pred hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCc-CCCccceeEEEee
Confidence 346688888999999999999976543 2346677665433 5666778888999999897 9999999998754
Q ss_pred -CCeEEEEEeccCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcE
Q 008475 172 -SLCVHIVMELCAGGELFDRIIQR--------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSL 242 (564)
Q Consensus 172 -~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~ 242 (564)
....++++.++.-|+|..+|..- ..++..+...++.|++.|++|||++|+||.||...|+++ ++...+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqV 435 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQV 435 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeE
Confidence 55678899999889999988731 236778899999999999999999999999999999999 788999
Q ss_pred EEeeCCCccccCCCCcee---cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 008475 243 KAIDFGLSVFFKPGQIFT---DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317 (564)
Q Consensus 243 kl~DfG~~~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~ 317 (564)
||+|=.+++..-+..+.- +.-....|||||.+. ..|+.++||||||+++|||+| |+.||..-++.++...+++|.
T Consensus 436 kltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy 515 (563)
T KOG1024|consen 436 KLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY 515 (563)
T ss_pred EeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc
Confidence 999999998876655321 122345799999987 569999999999999999999 999999999999999888875
Q ss_pred ccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 318 ~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
..-. +-++|+++..++..||..+|++||+++|+..
T Consensus 516 RlaQ---P~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 516 RLAQ---PFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred eecC---CCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 4322 2468999999999999999999999998754
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=241.92 Aligned_cols=210 Identities=45% Similarity=0.721 Sum_probs=185.0
Q ss_pred ccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCCc
Q 008475 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGE 186 (564)
Q Consensus 107 lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 186 (564)
||+|++|.||++....+++.+++|++....... ..+.+.+|+..++.+. |++|+++++++......++++|++.|++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999998889999999987543211 3567899999999997 9999999999999999999999999899
Q ss_pred hHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC-CCcEEEeeCCCccccCCCC-ceeccc
Q 008475 187 LFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD-DFSLKAIDFGLSVFFKPGQ-IFTDVV 263 (564)
Q Consensus 187 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~-~~~~kl~DfG~~~~~~~~~-~~~~~~ 263 (564)
|.+++... ..++...+..++.+++.+|.+||+.|++|+||+|.||++ +. .+.++|+|||.+....... ......
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~---~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL---DSDNGKVKLADFGLSKLLTSDKSLLKTIV 154 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEE---eCCCCcEEEecCCceEEccCCcchhhccc
Confidence 99988765 478999999999999999999999999999999999999 55 6789999999988764432 133456
Q ss_pred CCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 008475 264 GSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLC 341 (564)
Q Consensus 264 gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~ 341 (564)
+...|++||.+.. .++.++|+|++|+++++| ..+.+++.+|+.
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------~~~~~~l~~~l~ 199 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------PELKDLIRKMLQ 199 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------HHHHHHHHHHhh
Confidence 7889999999875 688899999999999999 678999999999
Q ss_pred cCCCCCCCHHHHhcCC
Q 008475 342 SQPSERLTAHEVLCHP 357 (564)
Q Consensus 342 ~dp~~R~s~~~vl~hp 357 (564)
.+|++||++.++++|+
T Consensus 200 ~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 200 KDPEKRPSAKEILEHL 215 (215)
T ss_pred CCcccCcCHHHHhhCC
Confidence 9999999999999885
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-30 Score=242.77 Aligned_cols=211 Identities=45% Similarity=0.716 Sum_probs=182.4
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|.+.+.||.|++|.||+|.+..+++.+|+|.+...... ...+.+.+|++.++.+. |+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLK-HPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCC-CCChhhheeeeecCCceEEEEe
Confidence 55678899999999999999888999999999765422 35678889999999996 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC--
Q 008475 181 LCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-- 257 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-- 257 (564)
++++++|.+++..... +++..+..++.+++.++.+||+.+++|+||+|.||++ +.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v---~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL---GMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeeCceeeEecCcccc
Confidence 9999999999987766 8999999999999999999999999999999999999 666899999999988765432
Q ss_pred ceecccCCCcccchhhh-h-hcCCCcchHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHcCC
Q 008475 258 IFTDVVGSPYYVAPEVL-L-KHYGPEADVWTAGVILYILLSGVPPFWA--ETQQGIFDAVLKGH 317 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~-~-~~~~~~~DvwSlG~il~elltg~~pf~~--~~~~~~~~~i~~~~ 317 (564)
......++..|++||.+ . ..++.++|||+||+++++|++|+.||.. .....+.+.+..+.
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence 33456678899999998 3 3477899999999999999999999977 34446777777665
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-31 Score=296.56 Aligned_cols=198 Identities=20% Similarity=0.218 Sum_probs=148.3
Q ss_pred C-CCccEEEEEE-------ecCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCC
Q 008475 159 H-KNIVTIKGAY-------EDSLCVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPE 229 (564)
Q Consensus 159 h-~niv~~~~~~-------~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~ 229 (564)
| +||+.++++| .....++.++|++ +++|.++|.. ...+++..+..+++||+.||.|||++||+||||||+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~ 109 (793)
T PLN00181 31 HIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPS 109 (793)
T ss_pred HHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCch
Confidence 5 5777888877 2334678889988 6799999965 356999999999999999999999999999999999
Q ss_pred cEEeec----------------CCCCCcEEEeeCCCccccCCC-----------------CceecccCCCcccchhhhhh
Q 008475 230 NFLLVN----------------KDDDFSLKAIDFGLSVFFKPG-----------------QIFTDVVGSPYYVAPEVLLK 276 (564)
Q Consensus 230 NIll~~----------------~~~~~~~kl~DfG~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~ 276 (564)
||||.. .+.++.+||+|||+++..... ......+||+.|+|||++.+
T Consensus 110 NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~ 189 (793)
T PLN00181 110 CFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG 189 (793)
T ss_pred hEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc
Confidence 999942 123456778888877642110 00112468899999999874
Q ss_pred -cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 277 -HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 277 -~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.|+.++|||||||+||||++|.+|+.... .....+..... +... ....+...+++.+||+++|.+||++.++|+
T Consensus 190 ~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 190 SSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQI-LLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred CCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--Chhh-hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 59999999999999999999998875332 12222222111 1111 112456788999999999999999999999
Q ss_pred CCCcCCC
Q 008475 356 HPWICEN 362 (564)
Q Consensus 356 hp~~~~~ 362 (564)
||||.+.
T Consensus 265 h~~~~~~ 271 (793)
T PLN00181 265 SEFINEP 271 (793)
T ss_pred chhhhhh
Confidence 9999763
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-28 Score=220.74 Aligned_cols=161 Identities=27% Similarity=0.326 Sum_probs=128.6
Q ss_pred CchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceeccc
Q 008475 185 GELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV 263 (564)
Q Consensus 185 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~ 263 (564)
|+|.+++..+ ..+++..++.|+.||+.||.|||+.+ ||+|||+ +.++.+|+ ||++....... ..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~~----~~ 65 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPEQ----SR 65 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeecccc----CC
Confidence 6899999764 46999999999999999999999998 9999999 77788998 99988754322 36
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCccCCCC---CCCCCCH--HHHHHH
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDFESD---PWPLISD--SAKDLI 336 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~---~~~~~s~--~~~~li 336 (564)
||+.|+|||++.+ .|+.++|||||||++|||++|+.||..... ...+..+.......... ....++. ++.++|
T Consensus 66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 145 (176)
T smart00750 66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM 145 (176)
T ss_pred CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence 8999999999975 589999999999999999999999976543 23333433322221111 1112333 699999
Q ss_pred HHhcccCCCCCCCHHHHhcCCCcC
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
.+||..||.+||++.++++|+|+.
T Consensus 146 ~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 146 RVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHHhcccccccCHHHHHHHHHHH
Confidence 999999999999999999999975
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-29 Score=264.64 Aligned_cols=256 Identities=27% Similarity=0.440 Sum_probs=200.0
Q ss_pred eecccccccCCeEEEEEEEccCCcEEEEEEeccc---cCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKR---KLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 102 ~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
....++|.|++|.|+.+......+.++.|..... ..........+..|+-+-..|. |||++..+..+.+....+-+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~-h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLS-HPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccccc-CCchhhhHHHHhhcccchhh
Confidence 4467899999999998888777776777755421 1112222233777888888887 99998877777666555556
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC--
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-- 256 (564)
||||++ +|+.++...+.++...+..++.|++.||.|||+.||.||||||+|+++ ...+.+||+|||.+....-+
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~---~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV---TENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE---ecCCceEEeecCcceeeccCcc
Confidence 999999 999999888889999999999999999999999999999999999999 77789999999998765432
Q ss_pred ---CceecccCCCcccchhhhhh-cCCC-cchHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHcCCccC---CCCCCC
Q 008475 257 ---QIFTDVVGSPYYVAPEVLLK-HYGP-EADVWTAGVILYILLSGVPPFWAETQQGIF--DAVLKGHIDF---ESDPWP 326 (564)
Q Consensus 257 ---~~~~~~~gt~~y~aPE~~~~-~~~~-~~DvwSlG~il~elltg~~pf~~~~~~~~~--~~i~~~~~~~---~~~~~~ 326 (564)
......+|+..|+|||++.+ .|.+ ..||||.|++++.|++|+.||......+.. ...-...... +...+.
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLS 555 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHH
Confidence 23456889999999999985 4655 689999999999999999999654433221 1111111111 122334
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.++...+.+|.+||++||.+|.|+++|++.+||+..
T Consensus 556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 556 LLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred hchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 578889999999999999999999999999999864
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-26 Score=227.66 Aligned_cols=253 Identities=25% Similarity=0.304 Sum_probs=194.3
Q ss_pred ceeecccccccCCeEEEEEEEccCC-cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc---CCCCccEEEEEE-ecCCe
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATG-IEFACKSISKRKLISREDVEDVRREIQIMHHLA---GHKNIVTIKGAY-EDSLC 174 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---~h~niv~~~~~~-~~~~~ 174 (564)
.|.+.++||+|+||.||+|.+..++ ..+|+|......... ...+..|+.++..+. +-+++..+++.. .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 6999999999999999999987775 678999876542211 116778999999887 246999999999 58888
Q ss_pred EEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC--CCCcEEEeeCCCc
Q 008475 175 VHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD--DDFSLKAIDFGLS 250 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~--~~~~~kl~DfG~~ 250 (564)
.||||+.+ |.+|.++.... +.++...+..++.|++.+|++||+.|++||||||+|+++.... ....+.|.|||++
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 88999877543 5799999999999999999999999999999999999996432 1257999999999
Q ss_pred cccC---CC-------Cc-eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc
Q 008475 251 VFFK---PG-------QI-FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI 318 (564)
Q Consensus 251 ~~~~---~~-------~~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~ 318 (564)
+... .. .. .....||..|.++....+ ..+.+.|+||++.++.+|+.|..||...........+.+...
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8321 11 11 123569999999999886 589999999999999999999999976554322322222211
Q ss_pred cCCCC-CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 319 DFESD-PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 319 ~~~~~-~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
..... .....+.++..+...+-..+...+|....+...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 255 KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred hhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 11111 223456778888888877888999988776554
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=225.27 Aligned_cols=255 Identities=37% Similarity=0.583 Sum_probs=209.9
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCC-CccEEEEEEecCCeEEEEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK-NIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~-niv~~~~~~~~~~~~~lv~ 179 (564)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|+.++..+. |+ +|+++.+.+......++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLN-HPPNIVKLYDFFQDEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHcc-CCcceeeEEEEEecCCEEEEEE
Confidence 677889999999999999987 789999998766544445778899999999998 66 8999999998888889999
Q ss_pred eccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCC-cEEEeeCCCccccCC
Q 008475 180 ELCAGGELFDRIIQRG---HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF-SLKAIDFGLSVFFKP 255 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~-~~kl~DfG~~~~~~~ 255 (564)
+++.++++.+.+.... .++...+..++.|++.++.|+|+.+++|||+||+||++ +... .++++|||.+.....
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~---~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL---DRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee---cCCCCeEEEeccCcceecCC
Confidence 9999999997776654 79999999999999999999999999999999999999 5555 699999999875543
Q ss_pred CC-------ceecccCCCcccchhhhhh----cCCCcchHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHcCCcc-
Q 008475 256 GQ-------IFTDVVGSPYYVAPEVLLK----HYGPEADVWTAGVILYILLSGVPPFWAETQ----QGIFDAVLKGHID- 319 (564)
Q Consensus 256 ~~-------~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~pf~~~~~----~~~~~~i~~~~~~- 319 (564)
.. ......|+..|+|||.+.+ .++...|+||+|++++++++|..||..... ......+......
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc
Confidence 32 3467789999999999975 578899999999999999999999877653 4555555444333
Q ss_pred CCCCCCCCC----CHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 320 FESDPWPLI----SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 320 ~~~~~~~~~----s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
......... ...+.+++.+++..+|..|.+..+...++|....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 222211111 2578999999999999999999999998776643
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=206.66 Aligned_cols=248 Identities=21% Similarity=0.263 Sum_probs=202.2
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
....|.++++||.|+||.+|+|....+|+.||||+-.... ...++..|..+.+.|++-..|+.+..+..+..+-.
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 3456999999999999999999999999999999875432 23457789999999998888999998889999999
Q ss_pred EEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRII-QRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+||+++ |.+|.+++. ..+.++...+..++-|++.-++|+|.+++|||||||+|+|..-......+-|+|||+|+....
T Consensus 88 lVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred eeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 999999 889988774 466799999999999999999999999999999999999996555566899999999987643
Q ss_pred CC--------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCccCC-C
Q 008475 256 GQ--------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ---QGIFDAVLKGHIDFE-S 322 (564)
Q Consensus 256 ~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~~~~~~-~ 322 (564)
.. .-....||.+|.+-....+ ..+..-|+=|+|.+|.++.-|..||.+... .+-++.|.......+ .
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie 246 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIE 246 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHH
Confidence 22 2235679999998777664 467889999999999999999999987654 455666665544333 2
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCH
Q 008475 323 DPWPLISDSAKDLIRKMLCSQPSERLTA 350 (564)
Q Consensus 323 ~~~~~~s~~~~~li~~~l~~dp~~R~s~ 350 (564)
.....+|.++.-.|.-|-..--++-|..
T Consensus 247 ~LC~G~P~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 247 VLCKGFPAEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred HHhCCCcHHHHHHHHHHhhcCCCCCCcH
Confidence 2446678899989988877776666654
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-26 Score=212.99 Aligned_cols=244 Identities=19% Similarity=0.291 Sum_probs=195.3
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|+++++||+|+||+++.|++..+++.||||.-... ...-++..|.+..+.|.+.+.|..++-+.+++.+-.||+|
T Consensus 30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred ceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 99999999999999999999999999999976543 2345788899999999999999999998899999999999
Q ss_pred ccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC--CCCCcEEEeeCCCccccCCCC
Q 008475 181 LCAGGELFDRII-QRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK--DDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 181 ~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~--~~~~~~kl~DfG~~~~~~~~~ 257 (564)
++ |.+|.+++. ..++|+.+.+..+|.|++.-++|+|++.+|+|||||+|+||... .....|-|+|||+|+......
T Consensus 105 LL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred hh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 99 889988775 35679999999999999999999999999999999999999642 234579999999999875433
Q ss_pred --------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCcc-CCCCC
Q 008475 258 --------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET---QQGIFDAVLKGHID-FESDP 324 (564)
Q Consensus 258 --------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~-~~~~~ 324 (564)
......||.+||+-....+ ..+.+-|+=|||-++.++|-|.+||.+.. ..+-+++|-..... .....
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~L 263 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVL 263 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHH
Confidence 2345679999999877665 48889999999999999999999998754 44555665432222 22223
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCH
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTA 350 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~ 350 (564)
...+|.++..-|+-.-..+-.+-|..
T Consensus 264 c~g~P~efa~Yl~yvR~L~F~E~PDY 289 (449)
T KOG1165|consen 264 CEGFPEEFATYLRYVRRLDFFETPDY 289 (449)
T ss_pred HhcCHHHHHHHHHHHHhcCcccCCCH
Confidence 34566666666665555555555554
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-28 Score=246.62 Aligned_cols=243 Identities=27% Similarity=0.426 Sum_probs=211.1
Q ss_pred cccccCCeEEEEEEE---ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEecc
Q 008475 106 KLGQGQFGTTYLCTE---IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELC 182 (564)
Q Consensus 106 ~lG~G~fg~V~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 182 (564)
.+|+|+||.|+++.. ...+..+|+|+..+......... ....|..++..+++||.++++.-.++.+...++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999998762 34567899999887665444333 66678889999888999999999999999999999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecc
Q 008475 183 AGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV 262 (564)
Q Consensus 183 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~ 262 (564)
.||.|...+.....+.+.....+...++-|++++|+.+|+|||+|++||++ +.+|++++.|||+++..-..+..
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~~--- 153 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKIA--- 153 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhhc---
Confidence 999999999888889999999999999999999999999999999999999 89999999999999876544432
Q ss_pred cCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 263 VGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 263 ~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
|||..|||||+++ .+..++|.||+|++++||+||..||.. ++...|.+.....+ ..++..+++++..++..
T Consensus 154 cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p----~~l~~~a~~~~~~l~~r 224 (612)
T KOG0603|consen 154 CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMP----RELSAEARSLFRQLFKR 224 (612)
T ss_pred ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCc----hhhhHHHHHHHHHHHhh
Confidence 9999999999998 667899999999999999999999987 67777777655544 34788999999999999
Q ss_pred CCCCCCC-----HHHHhcCCCcCCCCC
Q 008475 343 QPSERLT-----AHEVLCHPWICENGV 364 (564)
Q Consensus 343 dp~~R~s-----~~~vl~hp~~~~~~~ 364 (564)
+|.+|.. +.++++|+||....+
T Consensus 225 ~p~nrLg~~~~~~~eik~h~f~~~i~~ 251 (612)
T KOG0603|consen 225 NPENRLGAGPDGVDEIKQHEFFQSIDW 251 (612)
T ss_pred CHHHHhccCcchhHHHhccchheeeeH
Confidence 9999985 479999999996544
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-26 Score=228.23 Aligned_cols=165 Identities=19% Similarity=0.172 Sum_probs=130.2
Q ss_pred ccccceeecccccccCCeEEEEEEEcc-CCcEEEEEEeccccC--CCHHhHHHHHHHHHHHHhhcCCCCccE-EEEEEec
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIA-TGIEFACKSISKRKL--ISREDVEDVRREIQIMHHLAGHKNIVT-IKGAYED 171 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~-~~~~~~~ 171 (564)
.+.+.|.+.+.||+|+||+||+|.+.. +++.||||++..... ......+.+.+|+++|+++. |+||+. +++.
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~~--- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLAT--- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEEc---
Confidence 455679999999999999999999876 677889998753211 12334567899999999997 999884 5442
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecC-CCCcEEeecCCCCCcEEEeeCCCc
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL-KPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dl-kp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
...|||||||+|++|.. +. ... ...++.|++.||.|||++||+|||| ||+|||+ +.++.+||+|||+|
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv---~~~~~ikLiDFGlA 159 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLM---GPDGEAAVIDFQLA 159 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE---cCCCCEEEEECccc
Confidence 45899999999999963 21 111 1467899999999999999999999 9999999 66678999999999
Q ss_pred cccCCCC---------ceecccCCCcccchhhhh
Q 008475 251 VFFKPGQ---------IFTDVVGSPYYVAPEVLL 275 (564)
Q Consensus 251 ~~~~~~~---------~~~~~~gt~~y~aPE~~~ 275 (564)
....... ...+..+++.|+|||.+.
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 8664322 124567888999999996
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-26 Score=240.60 Aligned_cols=222 Identities=34% Similarity=0.528 Sum_probs=177.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
..|+.++.|..|+||.||.++|+.+.+.+|+| +.+..+.-+ + ++... ++|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~lilR-------n---ilt~a-~npfvv--------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLILR-------N---ILTFA-GNPFVV--------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccchhhh-------c---ccccc-CCccee---------------
Confidence 45888999999999999999999999999994 544332111 1 23322 355554
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC--
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-- 256 (564)
|+=...++.-++++... +.+++|||+.||+|||+||+|.++ ..-|++|+.|||+++..-..
T Consensus 136 ------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllI---T~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 ------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred ------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCccee---eecccccccchhhhhhhhhhcc
Confidence 33344454445555544 678999999999999999999999 77889999999997653211
Q ss_pred ------C--------ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC
Q 008475 257 ------Q--------IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE 321 (564)
Q Consensus 257 ------~--------~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 321 (564)
. .-...+||+.|+|||++. +.|+..+|+|++|+|+||.+.|..||.++++++++..+....+.++
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp 278 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP 278 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc
Confidence 0 112468999999999987 4599999999999999999999999999999999999999988888
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCCCcCCCCCC
Q 008475 322 SDPWPLISDSAKDLIRKMLCSQPSERL---TAHEVLCHPWICENGVA 365 (564)
Q Consensus 322 ~~~~~~~s~~~~~li~~~l~~dp~~R~---s~~~vl~hp~~~~~~~~ 365 (564)
...+ .++++++++|.++|+.+|..|. .+-+|.+|+||....+.
T Consensus 279 E~de-a~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 279 EEDE-ALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred ccCc-CCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 8744 5789999999999999999996 67789999999986654
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-24 Score=183.40 Aligned_cols=144 Identities=35% Similarity=0.599 Sum_probs=135.3
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLE 474 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~ 474 (564)
-.+|+.+++++++++|+.+|.|++|.|+..||..+++.+|.++++.++..+|..+|. +.|.|+|.+|+.++.... ...
T Consensus 11 ~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~ 89 (160)
T COG5126 11 FTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGD 89 (160)
T ss_pred cccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCC
Confidence 457899999999999999999999999999999999999999999999999999999 899999999999987755 455
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.++++..||+.||.|+||+|+..|++.++..+| +++++|+.++..+|.|+||.|+|++|++.+...
T Consensus 90 ~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~ 157 (160)
T COG5126 90 KEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDS 157 (160)
T ss_pred cHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhcc
Confidence 688999999999999999999999999999998 999999999999999999999999999988654
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=196.60 Aligned_cols=174 Identities=16% Similarity=0.159 Sum_probs=135.2
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHH------HHHHHHHHHhhcCCCCccEEEEEE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED------VRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
.+..+|++.++||.|+||.||++.. ++..+|+|++.......+..... +.+|+..+.++. ||+|..+.+++
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~-~~GI~~~~d~~ 104 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR-SEGLASLNDFY 104 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-HCCCCcceEee
Confidence 4668899999999999999999664 46689999997655444444344 579999999997 99999999886
Q ss_pred ecC--------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCc
Q 008475 170 EDS--------LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS 241 (564)
Q Consensus 170 ~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~ 241 (564)
... ...+|||||++|.+|.+.. .+++ ....+++.+|..||+.|++|||+||+||++ +.++
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili---~~~g- 172 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIV---SKNG- 172 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEE---eCCC-
Confidence 643 3588999999999997763 2333 245699999999999999999999999999 5556
Q ss_pred EEEeeCCCccccCCCCceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHH
Q 008475 242 LKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILL 295 (564)
Q Consensus 242 ~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ell 295 (564)
++|+|||........... ..++. +.|..++|+||||+++..+.
T Consensus 173 i~liDfg~~~~~~e~~a~-----------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAK-----------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhH-----------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999988754322111 11222 45778999999999987654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=193.71 Aligned_cols=143 Identities=22% Similarity=0.213 Sum_probs=111.3
Q ss_pred cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHH-----------------------hHHHHHHHHHHHHhhcCCC
Q 008475 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE-----------------------DVEDVRREIQIMHHLAGHK 160 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~~h~ 160 (564)
...||+|+||.||+|.+. +|+.||||+++........ .......|+.++.++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 467999999999999986 8999999999754221111 0123346999999997 77
Q ss_pred CccEEEEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCCEeecCCCCcEEeecCCCC
Q 008475 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC-HSLGVMHRDLKPENFLLVNKDDD 239 (564)
Q Consensus 161 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~iiH~Dlkp~NIll~~~~~~ 239 (564)
++.....+... ..+|||||++|+++...+...+.++...+..++.|++.+|.+| |+.||+||||||+|||+ + +
T Consensus 80 ~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli---~-~ 153 (190)
T cd05147 80 GIPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY---H-D 153 (190)
T ss_pred CCCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---E-C
Confidence 76443332222 2389999998887765545567899999999999999999999 79999999999999999 3 3
Q ss_pred CcEEEeeCCCccccC
Q 008475 240 FSLKAIDFGLSVFFK 254 (564)
Q Consensus 240 ~~~kl~DfG~~~~~~ 254 (564)
+.++|+|||+|....
T Consensus 154 ~~v~LiDFG~a~~~~ 168 (190)
T cd05147 154 GKLYIIDVSQSVEHD 168 (190)
T ss_pred CcEEEEEccccccCC
Confidence 579999999997643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.4e-23 Score=186.64 Aligned_cols=187 Identities=21% Similarity=0.253 Sum_probs=142.2
Q ss_pred ecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH-HhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEec
Q 008475 103 LGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR-EDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMEL 181 (564)
Q Consensus 103 ~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 181 (564)
+...|+.|+||+||.+.. .+.+++.+.+........ .....+.+|+++|++|.+|++|++++++ ...+++|||
T Consensus 6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 466899999999998774 677788776654322111 1122578999999999877999999986 346999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecC-CCCcEEeecCCCCCcEEEeeCCCccccCCCCce-
Q 008475 182 CAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL-KPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF- 259 (564)
Q Consensus 182 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dl-kp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~- 259 (564)
+.|.+|...+.. . ...++.|++.+|.+||++||+|||| ||+|||+ +.++.++|+|||++....+....
T Consensus 80 I~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv---~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 80 LAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLV---QEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred ecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEE---cCCCCEEEEECCCceecCCcchHH
Confidence 999988654321 1 2357889999999999999999999 7999999 66778999999999865543311
Q ss_pred ---e----------cccCCCcccchhhhh--hcCC-CcchHHHHHHHHHHHHhCCCCCCCCC
Q 008475 260 ---T----------DVVGSPYYVAPEVLL--KHYG-PEADVWTAGVILYILLSGVPPFWAET 305 (564)
Q Consensus 260 ---~----------~~~gt~~y~aPE~~~--~~~~-~~~DvwSlG~il~elltg~~pf~~~~ 305 (564)
. -...++.|++|+.-. ...+ ...++++.|+-+|.++||..|++++.
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 022577888888654 2333 56799999999999999999987765
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=200.59 Aligned_cols=233 Identities=26% Similarity=0.349 Sum_probs=154.7
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcC---------CCCccEEEEEEe-
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG---------HKNIVTIKGAYE- 170 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~---------h~niv~~~~~~~- 170 (564)
+..++.||.|+++.||.+++..|++.+|+|+............+++++|.-....+.+ |-.++--++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 5668899999999999999999999999999876554445567788877765555432 222222222221
Q ss_pred --------c---CC-----eEEEEEeccCCCchHHHHH---hcCCC----CHHHHHHHHHHHHHHHHHHHHCCCEeecCC
Q 008475 171 --------D---SL-----CVHIVMELCAGGELFDRII---QRGHY----SERKAAELTRIIVGVVEACHSLGVMHRDLK 227 (564)
Q Consensus 171 --------~---~~-----~~~lv~e~~~~~~L~~~l~---~~~~~----~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlk 227 (564)
. .. ..+++|+-+ .++|.+.+. ..... .......+..|++..+++||+.|++|+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 1 11 236788887 568876653 22222 222335566899999999999999999999
Q ss_pred CCcEEeecCCCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh---------cCCCcchHHHHHHHHHHHHhCC
Q 008475 228 PENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK---------HYGPEADVWTAGVILYILLSGV 298 (564)
Q Consensus 228 p~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~DvwSlG~il~elltg~ 298 (564)
|+|+++ +.+|.+.|+||+...... ........+..|.|||.... .++.+.|.|+||+++|.|.+|.
T Consensus 173 ~~nfll---~~~G~v~Lg~F~~~~r~g--~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~ 247 (288)
T PF14531_consen 173 PENFLL---DQDGGVFLGDFSSLVRAG--TRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGR 247 (288)
T ss_dssp GGGEEE----TTS-EEE--GGGEEETT--EEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS
T ss_pred eeeEEE---cCCCCEEEcChHHHeecC--ceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHcc
Confidence 999999 788999999998776543 33332445678999998752 2788999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 008475 299 PPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSER 347 (564)
Q Consensus 299 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R 347 (564)
.||........... ....+..+|+.++.||..+|++||.+|
T Consensus 248 lPf~~~~~~~~~~~--------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 248 LPFGLSSPEADPEW--------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -STCCCGGGSTSGG--------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCCccccccc--------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 99976544221111 122334689999999999999999988
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-24 Score=227.41 Aligned_cols=235 Identities=23% Similarity=0.341 Sum_probs=180.2
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEecccc-CCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRK-LISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
.|...+.||.+.|=+|.+|++. .|. |+||++-+.. ..+-....+-..|++ .... .|||++.+.-+-..+...|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~-~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALM-KAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhh-cCCcccchHHHHHhhHHHHHH
Confidence 4777889999999999999974 454 8999987654 233333444445555 3334 499999998888888889999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC----
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK---- 254 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~---- 254 (564)
-+|. ..+|++++.-++-+..-+.++|+.||+.||..||..||+|||||.+|||+ ....-+.|+||..-+..-
T Consensus 100 Rqyv-khnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILi---TSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 100 RQYV-KHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILI---TSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHH-hhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEE---eeechhhhhcccccCCccCCCC
Confidence 9998 56999999888888999999999999999999999999999999999999 556679999998755431
Q ss_pred -CCC---ceecccCCCcccchhhhhh------------cCCCcchHHHHHHHHHHHHh-CCCCCC-----------CCCH
Q 008475 255 -PGQ---IFTDVVGSPYYVAPEVLLK------------HYGPEADVWTAGVILYILLS-GVPPFW-----------AETQ 306 (564)
Q Consensus 255 -~~~---~~~~~~gt~~y~aPE~~~~------------~~~~~~DvwSlG~il~ellt-g~~pf~-----------~~~~ 306 (564)
+.. .+.+...-..|.|||.+.. ..+++-||||+||+++||++ |++||. ....
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~ 255 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDP 255 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCH
Confidence 111 1112222346999999852 14678899999999999988 788882 1122
Q ss_pred HHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 307 QGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 307 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+.+++.| -+..++.||..|++.||++|.++++.|+.
T Consensus 256 e~~Le~I--------------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 256 EQLLEKI--------------EDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHhC--------------cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 2233322 13468999999999999999999999985
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-22 Score=185.68 Aligned_cols=144 Identities=19% Similarity=0.155 Sum_probs=113.5
Q ss_pred cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH-----------------------HhHHHHHHHHHHHHhhcCCC
Q 008475 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR-----------------------EDVEDVRREIQIMHHLAGHK 160 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~~h~ 160 (564)
.+.||+|+||.||+|.+. +|+.||||++........ .....+..|...+.++. |+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence 568999999999999987 899999999876421100 01223468999999997 88
Q ss_pred CccEEEEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCC
Q 008475 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDD 239 (564)
Q Consensus 161 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~ 239 (564)
+|.....+.... .+|||||++|+++.........++...+..++.|++.+|.+||+ .||+||||||+|||+ + +
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll---~-~ 153 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY---H-D 153 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEE---E-C
Confidence 875444433332 48999999888665444445678899999999999999999999 999999999999999 4 5
Q ss_pred CcEEEeeCCCccccCC
Q 008475 240 FSLKAIDFGLSVFFKP 255 (564)
Q Consensus 240 ~~~kl~DfG~~~~~~~ 255 (564)
+.++|+|||++.....
T Consensus 154 ~~~~liDFG~a~~~~~ 169 (190)
T cd05145 154 GKPYIIDVSQAVELDH 169 (190)
T ss_pred CCEEEEEcccceecCC
Confidence 7899999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.7e-22 Score=176.62 Aligned_cols=141 Identities=43% Similarity=0.712 Sum_probs=129.7
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhh----
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLE---- 474 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~---- 474 (564)
++.++...++++|+.+|++++|+|+..||..+++.+|.+++..++..++..+|.+++|.|+++||+.++.......
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 4567788899999999999999999999999999999999999999999999999999999999999887544322
Q ss_pred -HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 475 -REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 475 -~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
..+.++++|+.||+|++|+|+.+||+.+|..+| ++.++++.++..+|.|+||.|+|+||+.+|..
T Consensus 82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 245899999999999999999999999999988 88999999999999999999999999999864
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.8e-23 Score=195.50 Aligned_cols=197 Identities=27% Similarity=0.360 Sum_probs=144.9
Q ss_pred cCCCCccEEEEEEecC---------------------------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHH
Q 008475 157 AGHKNIVTIKGAYEDS---------------------------LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII 209 (564)
Q Consensus 157 ~~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi 209 (564)
..|||||+++++|.+. ..+|+||.-+ ..+|.+++-.+ ..+....+-++.|+
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~-~~s~r~~~~~laQl 350 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR-HRSYRTGRVILAQL 350 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC-CCchHHHHHHHHHH
Confidence 3599999999888542 3589999888 56898888654 57788889999999
Q ss_pred HHHHHHHHHCCCEeecCCCCcEEeec-CCCCCcEEEeeCCCccccCCCC-------ceecccCCCcccchhhhhhc----
Q 008475 210 VGVVEACHSLGVMHRDLKPENFLLVN-KDDDFSLKAIDFGLSVFFKPGQ-------IFTDVVGSPYYVAPEVLLKH---- 277 (564)
Q Consensus 210 ~~~l~~lH~~~iiH~Dlkp~NIll~~-~~~~~~~kl~DfG~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~---- 277 (564)
++|+.|||.+||.|||+|.+|||+.- +|.--.+.|+|||++---.... ..-..-|.-.-||||+....
T Consensus 351 LEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~ 430 (598)
T KOG4158|consen 351 LEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPN 430 (598)
T ss_pred HHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCc
Confidence 99999999999999999999999953 3344578999999875433211 11224467789999999732
Q ss_pred ---CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH--
Q 008475 278 ---YGPEADVWTAGVILYILLSGVPPFWAETQQGIF-DAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAH-- 351 (564)
Q Consensus 278 ---~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~-- 351 (564)
--.++|.|+.|.+.||+++...||++....-+- ....+... +.....+++.+++|+..+|+.||++|+++.
T Consensus 431 avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL---Palp~~vpp~~rqlV~~lL~r~pskRvsp~iA 507 (598)
T KOG4158|consen 431 AVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL---PALPSRVPPVARQLVFDLLKRDPSKRVSPNIA 507 (598)
T ss_pred eeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC---CCCcccCChHHHHHHHHHhcCCccccCCccHH
Confidence 124789999999999999999999874321110 11111111 122346889999999999999999999864
Q ss_pred -HHhcCCC
Q 008475 352 -EVLCHPW 358 (564)
Q Consensus 352 -~vl~hp~ 358 (564)
.+|+-..
T Consensus 508 ANvl~LsL 515 (598)
T KOG4158|consen 508 ANVLNLSL 515 (598)
T ss_pred HhHHHHHH
Confidence 4454333
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-22 Score=183.18 Aligned_cols=238 Identities=19% Similarity=0.250 Sum_probs=187.2
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
..+..+|.+...|..|+|++. |..+++|++..+... ....+.+..|.-.|+-+. ||||+.+++.+.....+.+|..
T Consensus 192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t-~risrdfneefp~lrifs-hpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVT-ARISRDFNEEFPALRIFS-HPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcc-hhhcchhhhhCcceeeec-CCchhhhhhhccCCCCceEeee
Confidence 455678899999999999965 556788888766542 333456788888899887 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCCCCCcEEE--eeCCCccccC
Q 008475 181 LCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKA--IDFGLSVFFK 254 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~~~~~~kl--~DfG~~~~~~ 254 (564)
||+.|+|+..++.... ....++..++..++.|+.|||+.. |.---|....|++ |++...+| +|--++...
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi---dedltarismad~kfsfqe- 343 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI---DEDLTARISMADTKFSFQE- 343 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe---cchhhhheecccceeeeec-
Confidence 9999999999987654 577899999999999999999975 4444678888999 66666555 343333221
Q ss_pred CCCceecccCCCcccchhhhhhc----CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLKH----YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~~----~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
....-.|.||+||.+.+. .-.++|+|||++++|||.|.+.||...++.+.-.+|.-....... .+.++.
T Consensus 344 -----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~i--ppgis~ 416 (448)
T KOG0195|consen 344 -----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHI--PPGISR 416 (448)
T ss_pred -----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccC--CCCccH
Confidence 123347899999999743 335799999999999999999999998887766555433333222 357899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHH
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEV 353 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~v 353 (564)
.+..|+.-|+.-||.+||.++.+
T Consensus 417 hm~klm~icmnedpgkrpkfdmi 439 (448)
T KOG0195|consen 417 HMNKLMNICMNEDPGKRPKFDMI 439 (448)
T ss_pred HHHHHHHHHhcCCCCcCCCccee
Confidence 99999999999999999998765
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.9e-21 Score=177.41 Aligned_cols=138 Identities=18% Similarity=0.200 Sum_probs=108.4
Q ss_pred cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc----CCCCccEEEEEEecCC---e-E
Q 008475 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA----GHKNIVTIKGAYEDSL---C-V 175 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~~~~~~~~~~---~-~ 175 (564)
.+.||+|+||.||. +..++.. +||++..... ...+.+.+|+.+++.+. .||||++++++++++. . +
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 46899999999995 6777665 6998865432 23467899999999994 3899999999999863 4 3
Q ss_pred EEEEec--cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHHCCCEeecCCCCcEEeecCC-CCCcEEEeeCCCc
Q 008475 176 HIVMEL--CAGGELFDRIIQRGHYSERKAAELTRIIVGVV-EACHSLGVMHRDLKPENFLLVNKD-DDFSLKAIDFGLS 250 (564)
Q Consensus 176 ~lv~e~--~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l-~~lH~~~iiH~Dlkp~NIll~~~~-~~~~~kl~DfG~~ 250 (564)
.+|+|| +.+++|.+++.+ +.+++. ..++.+++.++ +|||+++|+||||||+|||+...+ .+..++|+||+.+
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 478999 557999999965 456666 35677777777 999999999999999999996533 4458999995444
|
|
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.2e-20 Score=154.31 Aligned_cols=146 Identities=33% Similarity=0.544 Sum_probs=135.2
Q ss_pred hhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh-hchh
Q 008475 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKL 473 (564)
Q Consensus 395 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~-~~~~ 473 (564)
....+++++.+.++..|..||.+++|+|+.+||+.+++.+|..+.+.++.+++..+|.++.|.|+|++|+..+.. +...
T Consensus 23 ~~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~ 102 (172)
T KOG0028|consen 23 PKSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGER 102 (172)
T ss_pred CCccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhcc
Confidence 345678888899999999999999999999999999999999999999999999999999999999999987543 4445
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+.+.+..+|+.+|.|++|.|+..+|+.+.+.+| ++++++.++++++|.|+||-|+-+||...|.+.
T Consensus 103 dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 103 DTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred CcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhcC
Confidence 6888999999999999999999999999999998 899999999999999999999999999998753
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=205.66 Aligned_cols=197 Identities=23% Similarity=0.304 Sum_probs=157.2
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|.|.+.||+|+||+||+|.+.. |+.||+|+-+......--...+++.-++ ++. -+.|..+...+...+.-+|
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk-~~~---~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLK-PQM---LPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhc-hhh---hcchHHHHHHHccCCccee
Confidence 3669999999999999999999866 9999999865432211111112221111 111 2456666666666777889
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeec----CCCCCcEEEeeCCCcccc
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN----KDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~----~~~~~~~kl~DfG~~~~~ 253 (564)
|+||.+.|+|++++...+.+++..+..++.|++..|++||..+|||+||||+|+||.. +.+...++|+|||.+..+
T Consensus 772 v~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred eeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 9999999999999998888999999999999999999999999999999999999943 223456999999998654
Q ss_pred ---CCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCC
Q 008475 254 ---KPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVP 299 (564)
Q Consensus 254 ---~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~ 299 (564)
.++..+...++|-.+-.+|...| .|++..|.|.|+.+++-||.|+.
T Consensus 852 ~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 852 KLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 34557778889999999999986 59999999999999999999874
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.5e-20 Score=176.29 Aligned_cols=146 Identities=21% Similarity=0.144 Sum_probs=115.3
Q ss_pred ceeecccccccCCeEEEEEE-EccCCcEEEEEEeccccCCC-------------------H--HhHHHHHHHHHHHHhhc
Q 008475 100 LYTLGRKLGQGQFGTTYLCT-EIATGIEFACKSISKRKLIS-------------------R--EDVEDVRREIQIMHHLA 157 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~-~~~~~~~vavK~~~~~~~~~-------------------~--~~~~~~~~E~~~l~~l~ 157 (564)
.|.+.+.||+|+||.||+|. +..+|+.||+|++....... . .....+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 38889999999999999998 77789999999987543110 0 01134678999999997
Q ss_pred CC--CCccEEEEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC-CEeecCCCCcEEee
Q 008475 158 GH--KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG-VMHRDLKPENFLLV 234 (564)
Q Consensus 158 ~h--~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~Dlkp~NIll~ 234 (564)
+ ..++++++. ...++||||++|++|.........+....+..++.||+.+|.+||+.| |+||||||+||++
T Consensus 109 -~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli- 182 (237)
T smart00090 109 -EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV- 182 (237)
T ss_pred -hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE-
Confidence 4 334455543 235899999999888766545556777778899999999999999999 9999999999999
Q ss_pred cCCCCCcEEEeeCCCccccC
Q 008475 235 NKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 235 ~~~~~~~~kl~DfG~~~~~~ 254 (564)
+ ++.++|+|||.+....
T Consensus 183 --~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 183 --H-DGKVVIIDVSQSVELD 199 (237)
T ss_pred --E-CCCEEEEEChhhhccC
Confidence 4 5689999999987644
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.8e-21 Score=189.46 Aligned_cols=243 Identities=23% Similarity=0.309 Sum_probs=164.9
Q ss_pred eeecccccccCCeEEEEEEEccC---CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEE-------EEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIAT---GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKG-------AYE 170 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~-------~~~ 170 (564)
+.+.+..+.++++.+...+.... .+.++-+..... .........+++-.+.....|+..+. .+ .+.
T Consensus 246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d---~~~~~~~~~r~~~~l~~~~~~~~s~~-~d~~~s~~~~~~ 321 (516)
T KOG1033|consen 246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVD---SLCACKYTFRQLGVLVDSSHSNRSIL-EDLRPSLFESSK 321 (516)
T ss_pred ccccccccccccCCchhhhhcccchhhhhccchhhhcc---chhhhhhhhhhhhheeccccCCcccc-cCCCCchhhhcc
Confidence 44455566666666655443222 222333322211 21333444556655555543443332 22 111
Q ss_pred -----cCCeEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcE
Q 008475 171 -----DSLCVHIVMELCAGGELFDRIIQRGH---YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSL 242 (564)
Q Consensus 171 -----~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~ 242 (564)
...++||.|++|...+|.++|..+.. .+......++.|+..|++| ++.+|||+||.||.+ ..+..+
T Consensus 322 ~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~---~~d~q~ 395 (516)
T KOG1033|consen 322 RNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFF---SDDDQL 395 (516)
T ss_pred ccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhcccccccc---ccchhh
Confidence 13368999999999999999976543 5667889999999999999 999999999999999 455589
Q ss_pred EEeeCCCccccCCCC-------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 008475 243 KAIDFGLSVFFKPGQ-------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAV 313 (564)
Q Consensus 243 kl~DfG~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i 313 (564)
||+|||+........ ..+...||..||+||.+.+ +|+.++||||||+||+||+. =..+| .....+..+
T Consensus 396 kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~---er~~t~~d~ 472 (516)
T KOG1033|consen 396 KIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF---ERIATLTDI 472 (516)
T ss_pred hhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH---HHHHhhhhh
Confidence 999999987655433 5567889999999999995 69999999999999999998 22222 112233444
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 314 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
..+.++. ..+..+ ++-..|+.+||...|.+||++.+.--|+|.
T Consensus 473 r~g~ip~--~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 473 RDGIIPP--EFLQDY-PEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred hcCCCCh--HHhhcC-cHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 4554431 112223 345689999999999999988888888875
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-21 Score=206.84 Aligned_cols=257 Identities=31% Similarity=0.500 Sum_probs=209.4
Q ss_pred eeecccccccCCeEEEEEEEcc-CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIA-TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
|.+.+.||+|+|+.|-.+.... ....+|+|.+.... ...........|..+-+.+.+|+|++.+++........++++
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred ccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 6777889999999999888643 34467777765443 244455667778888888877999999999999999999999
Q ss_pred eccCCCchHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-HCCCEeecCCCCcEEeecCCCCC-cEEEeeCCCccccCC
Q 008475 180 ELCAGGELFDRI-IQRG-HYSERKAAELTRIIVGVVEACH-SLGVMHRDLKPENFLLVNKDDDF-SLKAIDFGLSVFFKP 255 (564)
Q Consensus 180 e~~~~~~L~~~l-~~~~-~~~~~~~~~i~~qi~~~l~~lH-~~~iiH~Dlkp~NIll~~~~~~~-~~kl~DfG~~~~~~~ 255 (564)
+|..|+++...+ .... ..+...+..++.|+..++.|+| ..++.|||+||+|.++ +..+ .+++.|||+|.....
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l---~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLL---DESGSALKIADFGLATAYRN 177 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchh---ccCCCcccCCCchhhccccc
Confidence 999999999888 5554 6788899999999999999999 9999999999999999 5666 899999999987654
Q ss_pred -C---CceecccC-CCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCccCCCCCCCC
Q 008475 256 -G---QIFTDVVG-SPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGI-FDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 256 -~---~~~~~~~g-t~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~ 327 (564)
. ......+| ++.|+|||...+ ......|+||.|+++.-+++|..||........ +.........+...+|..
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNS 257 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcccc
Confidence 2 23345678 999999999986 467789999999999999999999865443321 111122222334556778
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
++....+++.+++..+|..|.+.+++-.+||+..
T Consensus 258 ~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 258 ISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred CChhhhhcccccccCCchhccccccccccccccc
Confidence 8999999999999999999999999999999988
|
|
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=156.73 Aligned_cols=144 Identities=34% Similarity=0.587 Sum_probs=130.5
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh-chhhH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL-NKLER 475 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-~~~~~ 475 (564)
..++++++.++..+|..+|.+++|.|+..||..++..++..+....+..+|..+|.+++|.|+|+||+.++... .....
T Consensus 9 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 88 (158)
T PTZ00183 9 PGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDP 88 (158)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCc
Confidence 46788999999999999999999999999999999999988889999999999999999999999999876543 22334
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...++.+|+.+|.+++|.|+.+||..++..+| +++.++..+|..+|.+++|.|+|+||++++...
T Consensus 89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 155 (158)
T PTZ00183 89 REEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKKT 155 (158)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 56789999999999999999999999998776 899999999999999999999999999998764
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=164.33 Aligned_cols=137 Identities=31% Similarity=0.371 Sum_probs=113.4
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHH-----hHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE-----DVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
+.||+|++|.||+|.+ .|..|++|+.......... ....+.+|+.++..+. |++|+....++.+....++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEE
Confidence 5799999999999986 6778999986543322221 2345788999999997 898887777777777889999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
||++|++|.+.+..... ....++.+++.+|.+||+.|++|||++|.|||+ + .+.++|+|||++..
T Consensus 79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~---~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMIL---S-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEE---E-CCCEEEEECCcccC
Confidence 99999999988865322 888999999999999999999999999999999 4 56799999999875
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-19 Score=181.84 Aligned_cols=198 Identities=23% Similarity=0.314 Sum_probs=157.4
Q ss_pred HhhcCCCCccEEEEEEecCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCC-EeecCCCCcE
Q 008475 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGV-MHRDLKPENF 231 (564)
Q Consensus 154 ~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i-iH~Dlkp~NI 231 (564)
+.+. |.|+.+++|.+.++..+++|.+||..|+|.+.+.. .-.++.--...+++.|+.||.|||.-.| .|+.|++.|+
T Consensus 2 ~~l~-h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 2 RQLD-HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred cccc-hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 4565 99999999999999999999999999999999876 3457777788899999999999998776 9999999999
Q ss_pred EeecCCCCCcEEEeeCCCccccCC---CCceecccCCCcccchhhhhhc--------CCCcchHHHHHHHHHHHHhCCCC
Q 008475 232 LLVNKDDDFSLKAIDFGLSVFFKP---GQIFTDVVGSPYYVAPEVLLKH--------YGPEADVWTAGVILYILLSGVPP 300 (564)
Q Consensus 232 ll~~~~~~~~~kl~DfG~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~--------~~~~~DvwSlG~il~elltg~~p 300 (564)
++ +..+.+||+|||+...... ........-...|.|||.+... .+.++||||+|++++|+++...|
T Consensus 81 lv---d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 81 LV---DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ee---eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 99 8899999999999877532 1111222234569999999742 46789999999999999999999
Q ss_pred CCCC----CHHHHHHHHHc-CCccCCCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 301 FWAE----TQQGIFDAVLK-GHIDFESDPW--PLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 301 f~~~----~~~~~~~~i~~-~~~~~~~~~~--~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
|... .+.++...+.+ +...+.+..+ ...++++..+++.||..+|..||+++++-.
T Consensus 158 ~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred cccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 9652 23456666666 3322222211 145668999999999999999999998755
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=153.36 Aligned_cols=143 Identities=39% Similarity=0.706 Sum_probs=128.6
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh-chhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL-NKLE 474 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-~~~~ 474 (564)
+..+++++.+.++..|..+|.+++|.|+.+||..++..++..+....+..+|..+|.+++|.|+|+||+.++... ....
T Consensus 2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~ 81 (149)
T PTZ00184 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD 81 (149)
T ss_pred CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc
Confidence 345788889999999999999999999999999999999988889999999999999999999999999887643 2233
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
....+..+|+.+|.+++|.|+.+||..++...| ++.++++.+|..+|.+++|.|+|+||+.++.
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 456788999999999999999999999998876 7899999999999999999999999998875
|
|
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.3e-18 Score=140.25 Aligned_cols=141 Identities=30% Similarity=0.515 Sum_probs=130.3
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHh-hhchhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV-HLNKLE 474 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~-~~~~~~ 474 (564)
-..|++.++++++++|..+|.|+||.|++++|+..|..+|..+++++|+.|+... .|.|+|.-|+.++- .+....
T Consensus 23 Famf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~gtd 98 (171)
T KOG0031|consen 23 FAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMFGEKLNGTD 98 (171)
T ss_pred HHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhcCCC
Confidence 3468899999999999999999999999999999999999999999999999754 68999999999864 466667
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.++.+..||+.||.+++|.|..+.|+.+|...| +++++|++++..+-.|..|.|+|.+|+.++..+
T Consensus 99 pe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ithG 166 (171)
T KOG0031|consen 99 PEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIITHG 166 (171)
T ss_pred HHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHHcc
Confidence 889999999999999999999999999999988 999999999999999999999999999999865
|
|
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.6e-18 Score=149.04 Aligned_cols=147 Identities=29% Similarity=0.404 Sum_probs=135.3
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhh-CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHH
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRY-GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAF 483 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F 483 (564)
..+...|+..|+|+.|.|+.+||..+|... ...++.+.++.|+..+|.+.+|+|+|+||..+|..+.. ++.+|
T Consensus 57 ~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~------Wr~vF 130 (221)
T KOG0037|consen 57 PQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQ------WRNVF 130 (221)
T ss_pred HHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHH------HHHHH
Confidence 457789999999999999999999999854 47888999999999999999999999999999976544 67999
Q ss_pred HHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCC
Q 008475 484 QYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAP 561 (564)
Q Consensus 484 ~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~ 561 (564)
+.||+|++|.|+..||+.+|..+| ++++..+-+++++|.-+.|.|.|++|++++..+ ..+.++|+++|.+.+
T Consensus 131 ~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L------~~lt~~Fr~~D~~q~ 204 (221)
T KOG0037|consen 131 RTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL------QRLTEAFRRRDTAQQ 204 (221)
T ss_pred HhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHH------HHHHHHHHHhccccc
Confidence 999999999999999999999998 899999999999998889999999999999877 778999999999999
Q ss_pred CC
Q 008475 562 GS 563 (564)
Q Consensus 562 g~ 563 (564)
|+
T Consensus 205 G~ 206 (221)
T KOG0037|consen 205 GS 206 (221)
T ss_pred ee
Confidence 84
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.6e-18 Score=158.68 Aligned_cols=134 Identities=27% Similarity=0.297 Sum_probs=106.1
Q ss_pred cccccCCeEEEEEEEccCCcEEEEEEeccccCCCH-----HhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR-----EDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 106 ~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
.||+|+||.||+|. .++..|++|+......... ....++.+|++++..+. |+++....-++......++|||
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEE
Confidence 48999999999998 4678899998654332221 12356788999999997 7765544444455666789999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
|++|++|.+.+..... .++.+++.+|.+||+.|++|||++|.||++ + ++.++++|||++...
T Consensus 78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~---~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIV---R-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEE---E-CCcEEEEECCCCcCC
Confidence 9999999887754321 889999999999999999999999999999 4 578999999998763
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.6e-18 Score=158.97 Aligned_cols=139 Identities=23% Similarity=0.248 Sum_probs=108.3
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH-------------------HhHHHHHHHHHHHHhhcCCC-
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR-------------------EDVEDVRREIQIMHHLAGHK- 160 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~~h~- 160 (564)
|.+.+.||+|+||.||+|.+. +|+.||||++........ ........|+.++..+. |+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-HcC
Confidence 778899999999999999864 799999998764321000 01123678999999996 66
Q ss_pred -CccEEEEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCC
Q 008475 161 -NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD 239 (564)
Q Consensus 161 -niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~ 239 (564)
.++..++. ...++||||++|++|..... ......++.+++.++.++|+.||+||||||+||++ +.+
T Consensus 95 i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill---~~~ 161 (198)
T cd05144 95 FPVPKPIDW----NRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV---DDD 161 (198)
T ss_pred CCCCceeec----CCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE---cCC
Confidence 45555542 34589999999999866432 14567788999999999999999999999999999 667
Q ss_pred CcEEEeeCCCccccC
Q 008475 240 FSLKAIDFGLSVFFK 254 (564)
Q Consensus 240 ~~~kl~DfG~~~~~~ 254 (564)
+.++|+|||.+....
T Consensus 162 ~~~~liDfg~~~~~~ 176 (198)
T cd05144 162 EKIYIIDWPQMVSTD 176 (198)
T ss_pred CcEEEEECCccccCC
Confidence 899999999986544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-17 Score=176.89 Aligned_cols=140 Identities=24% Similarity=0.265 Sum_probs=111.4
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC-----HHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS-----REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
.|...+.||+|+||.||+|.+.. ..+++|+........ ....+++.+|+++++.++ |++|+....++.....
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEEEeCCC
Confidence 35668899999999999998643 344444432221111 123456889999999997 9999888777777777
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
.++||||++|++|.+++. ....++.+++.+|.+||+.||+||||||+|||+ + ++.++|+|||+++...
T Consensus 411 ~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl---~-~~~~~liDFGla~~~~ 478 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV---R-DDRLYLIDFGLGKYSD 478 (535)
T ss_pred CEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE---E-CCcEEEEeCcccccCC
Confidence 899999999999998775 457799999999999999999999999999999 2 4579999999998743
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-17 Score=170.92 Aligned_cols=258 Identities=22% Similarity=0.241 Sum_probs=202.6
Q ss_pred ccccceeecccccc--cCCeEEEEEEE--ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 96 NIRDLYTLGRKLGQ--GQFGTTYLCTE--IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 96 ~~~~~y~~~~~lG~--G~fg~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
.+...+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.. .........=.+|+.-.+.+..|+|.++.+..++.
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p-~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIP-FSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCC-CCCccccccccchhhcccccCccccccccCccccc
Confidence 35566788899999 99999999987 888999999974322 11222223345677777888889999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHHHCCCEeecCCCCcEEeecCCCC-CcEEEe
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVG----VVEACHSLGVMHRDLKPENFLLVNKDDD-FSLKAI 245 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~----~l~~lH~~~iiH~Dlkp~NIll~~~~~~-~~~kl~ 245 (564)
.+..++-+|+| +.+|..+...... ++...++.+..+... ||.++|+.+|+|-|+||+||+. ..+ ...+++
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~---~~~~~s~~~~ 265 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFT---TSDWTSCKLT 265 (524)
T ss_pred CCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheec---ccccceeecC
Confidence 99999999999 6788887776544 889999999999999 9999999999999999999999 445 789999
Q ss_pred eCCCccccCCCCce------ecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc
Q 008475 246 DFGLSVFFKPGQIF------TDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID 319 (564)
Q Consensus 246 DfG~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~ 319 (564)
|||+...+...... ....|...|++||++.+-++..+|+|++|.++.+..+|..++........ ..+..+.
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W-~~~r~~~-- 342 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSW-SQLRQGY-- 342 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCc-ccccccc--
Confidence 99998877654422 22357778999999999999999999999999999988776644411111 1111111
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 320 FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 320 ~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.+.+.....+..+...+..|++.+|-.|++++.+++|+++..
T Consensus 343 ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 233334455677778999999999999999999999999973
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.6e-17 Score=152.48 Aligned_cols=141 Identities=20% Similarity=0.209 Sum_probs=100.7
Q ss_pred cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHH---------------------HHHHHHHHHHhhcCC-CC
Q 008475 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE---------------------DVRREIQIMHHLAGH-KN 161 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------------------~~~~E~~~l~~l~~h-~n 161 (564)
.+.||+|+||.||+|.+. +++.||||++............ ....|...+..+..+ ..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 568999999999999976 7999999998654321111111 114677777777522 23
Q ss_pred ccEEEEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCC
Q 008475 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDF 240 (564)
Q Consensus 162 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~ 240 (564)
+++.++. ...++||||++++.+.......... ...+..++.+++.++.++|. .||+||||||+||++ + ++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili---~-~~ 151 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILV---D-DG 151 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhhh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE---E-CC
Confidence 5555543 2358999999985432211111111 16788999999999999999 999999999999999 4 67
Q ss_pred cEEEeeCCCccccC
Q 008475 241 SLKAIDFGLSVFFK 254 (564)
Q Consensus 241 ~~kl~DfG~~~~~~ 254 (564)
.++|+|||.+....
T Consensus 152 ~~~liDfg~a~~~~ 165 (187)
T cd05119 152 KVYIIDVPQAVEID 165 (187)
T ss_pred cEEEEECccccccc
Confidence 89999999997544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-16 Score=130.95 Aligned_cols=140 Identities=24% Similarity=0.437 Sum_probs=123.8
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC--CCCccchhhhHHHHhhhchh--
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD--NSGTIDYGEFIAATVHLNKL-- 473 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~--~~g~I~~~eF~~~~~~~~~~-- 473 (564)
.++++++..++++|..||..+||.|+..++..+++.+|.+|+++++.+....++.+ +-..|+|++|+.++..+.+.
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~ 83 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKD 83 (152)
T ss_pred ccCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccc
Confidence 35677788999999999999999999999999999999999999999999998876 44689999999998766543
Q ss_pred -hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 474 -EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 474 -~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
.+.+.+-+.++.+|++++|.|...||+++|..+| +++++|++++.-.. |.+|.|.|+.|++.+.
T Consensus 84 q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~e-D~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 84 QGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQE-DSNGCINYEAFVKHIM 150 (152)
T ss_pred cCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHcccc-ccCCcCcHHHHHHHHh
Confidence 3456777889999999999999999999999998 99999999996644 7789999999998764
|
|
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.1e-16 Score=140.95 Aligned_cols=141 Identities=29% Similarity=0.479 Sum_probs=117.7
Q ss_pred hhhhHHHHHhHhhhhhcccCC-CCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCc-cchhhhHHHHhhhchhh
Q 008475 397 ESLSEEEIAGLKEMFKAMDTD-NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGT-IDYGEFIAATVHLNKLE 474 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d-~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~-I~~~eF~~~~~~~~~~~ 474 (564)
..|+..|+.+|..+|.++|.+ ++|+|+.+||..+.. +..++- ..+++..++.+++|. |+|++|+..+..+....
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~-~~~Np~---~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~ 100 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPE-LALNPL---ADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKA 100 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHH-HhcCcH---HHHHHHHHhccCCCCccCHHHHHHHHhhhcCCc
Confidence 348999999999999999999 999999999999884 333332 367888888888887 99999999988766554
Q ss_pred H-HHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCC--HH----HHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 475 R-EEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMT--DV----LLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 475 ~-~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~--~~----~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
. +++++.||+.||.+++|+|+++|+..++..+ +.+ ++ .++.+|.++|.|+||+|+++||.+++.+.+
T Consensus 101 ~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P 177 (187)
T KOG0034|consen 101 SKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQP 177 (187)
T ss_pred cHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCc
Confidence 4 4599999999999999999999999998763 233 33 366789999999999999999999998763
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=137.00 Aligned_cols=141 Identities=26% Similarity=0.393 Sum_probs=121.2
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCC-CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHH
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGS-TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~ 476 (564)
.|+..+++.+++-|.. ...+|.++.++|+.++..++. .-...-.+.+|..+|.++||.|+|.||+.+++.......+
T Consensus 22 ~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~e 99 (193)
T KOG0044|consen 22 KFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLE 99 (193)
T ss_pred CCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHH
Confidence 6778888888888776 557999999999999998775 3345556889999999999999999999999988888889
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhC----CC---------CHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEH----NM---------TDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~~---------~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
+.++.+|+.||.|++|+|+++|+..++... |. ..+-++.+|..+|.|+||.||++||+.....-
T Consensus 100 ekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d 176 (193)
T KOG0044|consen 100 EKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKAD 176 (193)
T ss_pred HHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhC
Confidence 999999999999999999999999888653 21 23558889999999999999999999887644
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-17 Score=179.11 Aligned_cols=262 Identities=29% Similarity=0.414 Sum_probs=211.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.+.+.+-+-.|+++.++.+.-..+|...++|+............+....+-.++-..+ ||.++...-.+......+|+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~-~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPR-SPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCC-CCceecccCCCCCCCCcchh
Confidence 45777788999999999999988888777777665443333334444444444444333 66666655555667789999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC----
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK---- 254 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~---- 254 (564)
++|..+++|...|+..+..+++.++.....+..+++|||...+.|||++|.|+|. ...+..++.|||......
T Consensus 883 ~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~---~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI---AYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhh---cccCCcccCccccccccccccC
Confidence 9999999999999988889999999999999999999999999999999999999 778899999998422110
Q ss_pred --CC--------------------------CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 008475 255 --PG--------------------------QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET 305 (564)
Q Consensus 255 --~~--------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~ 305 (564)
.. .......+|+.|.+||.+.+ .....+|+|++|++++|.++|.+||....
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 00 00123578999999999985 58889999999999999999999999999
Q ss_pred HHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH---HHhcCCCcCCCCCC
Q 008475 306 QQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAH---EVLCHPWICENGVA 365 (564)
Q Consensus 306 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~---~vl~hp~~~~~~~~ 365 (564)
+++++++|..+.+.++..+ ...++++++++.++|..+|.+|..+. ++-.||||+...+.
T Consensus 1040 pq~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred hhhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCcc
Confidence 9999999999988877654 35789999999999999999999887 89999999976543
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.7e-16 Score=147.12 Aligned_cols=139 Identities=22% Similarity=0.296 Sum_probs=105.0
Q ss_pred ccccc-ccCCeEEEEEEEccCCcEEEEEEeccccC----------CCHHhHHHHHHHHHHHHhhcCCCCc--cEEEEEEe
Q 008475 104 GRKLG-QGQFGTTYLCTEIATGIEFACKSISKRKL----------ISREDVEDVRREIQIMHHLAGHKNI--VTIKGAYE 170 (564)
Q Consensus 104 ~~~lG-~G~fg~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~~h~ni--v~~~~~~~ 170 (564)
...|| .|+.|+||.+.. .+..++||.+..... .......++.+|+.++.+|. |++| +..+++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~ 112 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARV 112 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeee
Confidence 34677 889999999885 377899998854321 01123456788999999997 7775 67777643
Q ss_pred cC-C---eEEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEe
Q 008475 171 DS-L---CVHIVMELCAG-GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAI 245 (564)
Q Consensus 171 ~~-~---~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~ 245 (564)
.. . ..++|||+++| .+|.+++.. ..+++.. +.+|+.+|.+||++||+||||||.|||+ +.++.++|+
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv---~~~~~v~LI 184 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILL---DPDGKFWLI 184 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEE---cCCCCEEEE
Confidence 32 2 23599999997 688877654 4566543 5789999999999999999999999999 556689999
Q ss_pred eCCCcccc
Q 008475 246 DFGLSVFF 253 (564)
Q Consensus 246 DfG~~~~~ 253 (564)
|||.+...
T Consensus 185 Dfg~~~~~ 192 (239)
T PRK01723 185 DFDRGELR 192 (239)
T ss_pred ECCCcccC
Confidence 99998763
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.6e-15 Score=134.92 Aligned_cols=133 Identities=24% Similarity=0.304 Sum_probs=111.4
Q ss_pred ecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCC-CCccEEEEEEecCCeEEEEEec
Q 008475 103 LGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH-KNIVTIKGAYEDSLCVHIVMEL 181 (564)
Q Consensus 103 ~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~niv~~~~~~~~~~~~~lv~e~ 181 (564)
+.+.||.|.++.||++.... ..+++|....... ...+..|+.+++.+..+ .++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 35679999999999999643 6899998864321 45688999999999844 6899999988888899999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 182 CAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL---GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 182 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
++|+.+... +......++.+++.+|.+||.. +++|+|++|+||++ ++.+.++++|||.+..
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~---~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILV---DDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEE---ECCcEEEEEecccccC
Confidence 988877543 5667778899999999999985 69999999999999 4567899999998875
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.9e-15 Score=141.00 Aligned_cols=161 Identities=20% Similarity=0.305 Sum_probs=131.0
Q ss_pred HHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-------hh--
Q 008475 403 EIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-------KL-- 473 (564)
Q Consensus 403 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-------~~-- 473 (564)
...++..++..+|.+++|.|+..|+..++.+........+..+.|..+|.+.||.|+|+|++..+.... ..
T Consensus 75 ~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~ 154 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEED 154 (325)
T ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchh
Confidence 456789999999999999999999999998766666677778899999999999999999998876431 11
Q ss_pred -----hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC---
Q 008475 474 -----EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV--- 542 (564)
Q Consensus 474 -----~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~--- 542 (564)
.+...-+..|+..|.|+||.+|++||..+|.... +.+-.|.+-+...|+|+||+|+++||+.-|-....
T Consensus 155 ~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~ 234 (325)
T KOG4223|consen 155 NEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEE 234 (325)
T ss_pred cHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCC
Confidence 1223345789999999999999999999997653 56677899999999999999999999997776532
Q ss_pred --CCChHHHHHHHhHHccCCCCC
Q 008475 543 --GLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 543 --~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+...+-...|...|+|+||+
T Consensus 235 epeWv~~Ere~F~~~~DknkDG~ 257 (325)
T KOG4223|consen 235 EPEWVLTEREQFFEFRDKNKDGK 257 (325)
T ss_pred CcccccccHHHHHHHhhcCCCCc
Confidence 222344457888889999996
|
|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.9e-14 Score=136.82 Aligned_cols=144 Identities=23% Similarity=0.377 Sum_probs=126.7
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCC-CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHH
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST-LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEH 478 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~ 478 (564)
.++...+++.+|+.+|.+++|+++..++.+.+..+..+ +..+-...+|+..|.|.||.|||+||...+. ..+..
T Consensus 9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~-----~~E~~ 83 (463)
T KOG0036|consen 9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD-----NKELE 83 (463)
T ss_pred cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH-----HhHHH
Confidence 34555689999999999999999999999999998876 7777788999999999999999999998885 34566
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHH
Q 008475 479 LVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNS 552 (564)
Q Consensus 479 l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~ 552 (564)
+..+|..+|.++||.|+..|+...|+.+| ++++++..+|+.+|.++.+.|+++||.+.+.-. +++++.++
T Consensus 84 l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~----p~s~i~di 155 (463)
T KOG0036|consen 84 LYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLY----PESDLEDI 155 (463)
T ss_pred HHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcC----ChhHHHHH
Confidence 88999999999999999999999999988 899999999999999999999999999987543 34555554
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-13 Score=122.58 Aligned_cols=124 Identities=23% Similarity=0.276 Sum_probs=114.8
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCC-------CHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNM-------TDVL 512 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~-------~~~~ 512 (564)
..++..+|..+|.+++|.|+-.|+..++..+...+++..+..++..+|.+++|.|+++||..++...+. ..++
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~e 86 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEE 86 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHH
Confidence 456788999999999999999999999998888889999999999999999999999999999976541 3458
Q ss_pred HHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 513 LEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 513 ~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+.++|+.+|.|++|.|+.+|+..+|..++...+.+++..+++..|.||||+
T Consensus 87 l~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~ 137 (151)
T KOG0027|consen 87 LKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGK 137 (151)
T ss_pred HHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCe
Confidence 999999999999999999999999999999999999999999999999995
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.2e-13 Score=118.05 Aligned_cols=122 Identities=20% Similarity=0.278 Sum_probs=112.2
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~ 517 (564)
+++++.|..+|.+++|.|++.++..++..+....+...+.++|..+|. +.|.|++.+|..++... +-+.+++..+|
T Consensus 20 ~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF 98 (160)
T COG5126 20 QELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAF 98 (160)
T ss_pred HHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 446778889999999999999999999888888889999999999999 99999999999998542 25688999999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+.+|.|+||+|++.|+..++..++..++++++.++|+.+|.|+||+
T Consensus 99 ~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~ 144 (160)
T COG5126 99 KLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGE 144 (160)
T ss_pred HHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCce
Confidence 9999999999999999999999999999999999999999999995
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.8e-15 Score=139.29 Aligned_cols=237 Identities=18% Similarity=0.218 Sum_probs=158.0
Q ss_pred eEEEEEEEccCCcEEEEEEeccccCCCH-HhHHHHHHHHHHHHhhcCCCCccEEEEEEecC-----CeEEEEEeccCCCc
Q 008475 113 GTTYLCTEIATGIEFACKSISKRKLISR-EDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS-----LCVHIVMELCAGGE 186 (564)
Q Consensus 113 g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~e~~~~~~ 186 (564)
-.||++.+...|.+|+.-.+......+. ..-++...-..-|-++. |.|||++..+|.+. ....++.||++.|+
T Consensus 80 d~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlv-HsnlvkfH~yw~d~K~~e~~rviFiteymssgs 158 (458)
T KOG1266|consen 80 DDVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLV-HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGS 158 (458)
T ss_pred HHHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHH-HHHHHHHHHhhcccccccccceEEEEecccchh
Confidence 3467777666776665443322111111 11112222334445555 99999999998654 45788999999999
Q ss_pred hHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC---
Q 008475 187 LFDRIIQR----GHYSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ--- 257 (564)
Q Consensus 187 L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~--- 257 (564)
|..+|++- ..+....+.+|+.||+.||.|||+.. |+|+++..+-|++ ..++.+|+.----... .+.-
T Consensus 159 ~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifi---q~ngLIkig~~ap~s~-h~s~~~~ 234 (458)
T KOG1266|consen 159 LKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFI---QHNGLIKIGSVAPDST-HPSVNST 234 (458)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheee---cCCceEEecccCcccc-chhhhhh
Confidence 99998753 35888999999999999999999975 9999999999999 6777777643221111 1100
Q ss_pred ---ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 258 ---IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPP-FWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 258 ---~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
......+-++|.|||.=. .+.+.++|||+||+...+|..|..- -.+......-..+.+-.+-.. ...-
T Consensus 235 ~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~le-------n~lq 307 (458)
T KOG1266|consen 235 REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLE-------NGLQ 307 (458)
T ss_pred hHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeecc-------Cccc
Confidence 011234567899998754 4567799999999999999887754 222222222222222211111 1223
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
++++.+||...|..||++.++|-||.+-+
T Consensus 308 r~~i~kcl~~eP~~rp~ar~llfHpllfe 336 (458)
T KOG1266|consen 308 RGSITKCLEGEPNGRPDARLLLFHPLLFE 336 (458)
T ss_pred cCcCcccccCCCCCCcchhhhhcCceeee
Confidence 56899999999999999999999998754
|
|
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-13 Score=114.35 Aligned_cols=123 Identities=23% Similarity=0.334 Sum_probs=113.2
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHh-CC--CCHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE-HN--MTDVLLEDI 516 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~-~~--~~~~~~~~~ 516 (564)
.++++..|+.+|.+++|+|+++|+..++..+......+.+.++..-+|+++.|.|++++|++.+.. ++ -+.+++..+
T Consensus 32 ~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~a 111 (172)
T KOG0028|consen 32 KQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKA 111 (172)
T ss_pred HhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHH
Confidence 467888999999999999999999888877777778888999999999999999999999998754 22 588999999
Q ss_pred HHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCC
Q 008475 517 IREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPG 562 (564)
Q Consensus 517 ~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g 562 (564)
|+.+|.|++|+|+..+|..++..+++.++++++.++..+.|+|+||
T Consensus 112 frl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dg 157 (172)
T KOG0028|consen 112 FRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDG 157 (172)
T ss_pred HHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccc
Confidence 9999999999999999999999999999999999999999999998
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.9e-13 Score=121.38 Aligned_cols=142 Identities=12% Similarity=0.064 Sum_probs=103.8
Q ss_pred ccccccCCeEEEEEEEcc------CCcEEEEEEeccccC--C-----------------CHHhHHH----HHHHHHHHHh
Q 008475 105 RKLGQGQFGTTYLCTEIA------TGIEFACKSISKRKL--I-----------------SREDVED----VRREIQIMHH 155 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~------~~~~vavK~~~~~~~--~-----------------~~~~~~~----~~~E~~~l~~ 155 (564)
..||.|.-+.||.|.... .+..+|||+.+.... . ....... .++|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998543 357999999753211 0 0111222 3489999999
Q ss_pred hcCC-CCccEEEEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCCEeecCCCCcEEe
Q 008475 156 LAGH-KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC-HSLGVMHRDLKPENFLL 233 (564)
Q Consensus 156 l~~h-~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~iiH~Dlkp~NIll 233 (564)
+... -++++++++ ...+|||||+.+..+..-..+...+++..+..+..+++.+|..| |..||||+||+|.|||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~ 158 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW 158 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 9743 567788865 45679999996654432222333566677788899999999998 89999999999999999
Q ss_pred ecCCCCCcEEEeeCCCccccC
Q 008475 234 VNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 234 ~~~~~~~~~kl~DfG~~~~~~ 254 (564)
. ++.+.|+|||.+....
T Consensus 159 ~----~~~v~iIDF~qav~~~ 175 (197)
T cd05146 159 H----DGKVWFIDVSQSVEPT 175 (197)
T ss_pred E----CCcEEEEECCCceeCC
Confidence 3 3579999999887653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.7e-13 Score=140.17 Aligned_cols=141 Identities=20% Similarity=0.208 Sum_probs=95.4
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCC---------------------------HH----hHH------HHH
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS---------------------------RE----DVE------DVR 147 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~---------------------------~~----~~~------~~~ 147 (564)
+.||.|++|.||+|+. .+|+.||||+........ .. ... .+.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 5799999999999996 479999999985431000 00 000 133
Q ss_pred HHHHHHHhhc----CCCCc--cEEEEEEecCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHHC
Q 008475 148 REIQIMHHLA----GHKNI--VTIKGAYEDSLCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVG-VVEACHSL 219 (564)
Q Consensus 148 ~E~~~l~~l~----~h~ni--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~-~l~~lH~~ 219 (564)
+|...+.++. ++++| ++++. ......+|||||++|++|.+..... ... ....++..++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhC
Confidence 4555555543 23443 23332 2234578999999999998766432 122 23345566655 46889999
Q ss_pred CCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 220 ~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|++|+|+||.||++ +.++.++|+|||++....
T Consensus 277 g~~H~D~hPgNilv---~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 GFFHADLHPGNIFV---LKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CceeCCCCcccEEE---CCCCcEEEEeCCCeeECC
Confidence 99999999999999 677899999999987643
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.7e-14 Score=143.97 Aligned_cols=251 Identities=21% Similarity=0.212 Sum_probs=187.7
Q ss_pred ccceeecccccccCCeEEEEEEEc-cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEI-ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+|..+..||.|.|+.|+.+... .++..|++|.+.+.......++ .-..|+.+...+.-|.+++.+...|......|
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di-~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDI-FSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhh-cchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 345788899999999999987755 6778899998876554333333 33457777777777999999998888888888
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
|--|||+++++...+.-...+.+...+.+..|++.++.++|+..++|+|+||+||++.+++ +..++.|||+.....-
T Consensus 343 ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~~~~- 419 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTRLAF- 419 (524)
T ss_pred CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch--hhhhccccccccccce-
Confidence 9999999998876664445688899999999999999999999999999999999995432 7899999999864221
Q ss_pred CceecccCCCccc-chhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 257 QIFTDVVGSPYYV-APEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 257 ~~~~~~~gt~~y~-aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
........-++. .+|++.. .+..+.|++|||..+.+.++|...-+.... ...|..+... ..+..+.++.
T Consensus 420 -~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~~~p----~~~~~~~~~q 491 (524)
T KOG0601|consen 420 -SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSGDTP----NLPGLKLQLQ 491 (524)
T ss_pred -ecccccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceeeeccccc----CCCchHHhhh
Confidence 111122233444 3666664 477899999999999999998764333222 1223333222 1233457889
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
.+.+.++..++..||.+.++..|+=|.
T Consensus 492 ~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 492 VLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred hhhhhhcCCccccchhhhhhcccchhh
Confidence 999999999999999999988886553
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.7e-14 Score=147.71 Aligned_cols=144 Identities=19% Similarity=0.248 Sum_probs=93.2
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC--------------------------C-H----HhHHHHHH
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI--------------------------S-R----EDVEDVRR 148 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~--------------------------~-~----~~~~~~~~ 148 (564)
.|.. +.||.|++|.||+|+.+.+|+.||||++...... . . +..+.+.+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 3665 6899999999999999888999999999643100 0 0 11222333
Q ss_pred HH------HHHHhhc---CCCCccEEEEEEe-cCCeEEEEEeccCCCchHHH--HHhcC----CCCHHHHHHHHHHHHHH
Q 008475 149 EI------QIMHHLA---GHKNIVTIKGAYE-DSLCVHIVMELCAGGELFDR--IIQRG----HYSERKAAELTRIIVGV 212 (564)
Q Consensus 149 E~------~~l~~l~---~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~--l~~~~----~~~~~~~~~i~~qi~~~ 212 (564)
|+ ..+.+++ .+.+.+.+-.++. .....+|||||+.|+.+.+. +...+ .+.+..+..++.|+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi--- 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV--- 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH---
Confidence 44 3444333 1222233223332 24456799999999999764 33333 23344444444444
Q ss_pred HHHHHHCCCEeecCCCCcEEeecCCCCC----cEEEeeCCCccccC
Q 008475 213 VEACHSLGVMHRDLKPENFLLVNKDDDF----SLKAIDFGLSVFFK 254 (564)
Q Consensus 213 l~~lH~~~iiH~Dlkp~NIll~~~~~~~----~~kl~DfG~~~~~~ 254 (564)
+..|++|+|+||.||++ +.++ .++++|||++....
T Consensus 277 ----f~~GffHaDpHPGNIlv---~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ----FRDGFFHADMHPGNIFV---SYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ----HhCCeeeCCCChHHeEE---ecCCCCCCeEEEEecceEEECC
Confidence 46899999999999999 4444 89999999987654
|
|
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-12 Score=116.70 Aligned_cols=123 Identities=24% Similarity=0.337 Sum_probs=107.3
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~ 517 (564)
.++..+|..+|.+++|.|+++||..++...........+..+|..+|.+++|.|+.+||..++... ....+.++.+|
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 96 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAF 96 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 456778999999999999999998887655433455678899999999999999999999887542 25677899999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.+++|.|+++||..++...+..++..++..+|..+|.+++|.
T Consensus 97 ~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~ 142 (158)
T PTZ00183 97 RLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGE 142 (158)
T ss_pred HHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999998888889999999999999999995
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.2e-12 Score=119.16 Aligned_cols=129 Identities=20% Similarity=0.155 Sum_probs=96.1
Q ss_pred cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccC
Q 008475 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCA 183 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 183 (564)
.+.|+.|.++.||++... +..|++|+...... .......|+.+++.+.+...+++++.... ...++|||+++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 356889999999999853 77899998754321 12245689999999874334556666543 23579999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC-----EeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 184 GGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGV-----MHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 184 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-----iH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
|.++... ......++.+++.+|..||+.++ +|+|++|.||++ + ++.++++|||.+..
T Consensus 75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~---~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLL---D-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEE---E-CCeEEEEecccccC
Confidence 9887643 11123457889999999999985 999999999999 4 45699999998864
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.6e-11 Score=121.91 Aligned_cols=216 Identities=15% Similarity=0.097 Sum_probs=149.6
Q ss_pred EEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEeccCCCchHHHHHhcCC
Q 008475 117 LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH 196 (564)
Q Consensus 117 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~ 196 (564)
.|..+.++.+|.|..++... ........+-++-|+.++ ||||+++++.++.+.+.|||+|-+. .|..++...
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~---~~~~~~~~~A~k~lKtlR-HP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l-- 101 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSN---GEVTELAKRAVKRLKTLR-HPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL-- 101 (690)
T ss_pred ccceeccCCceEEEEEeCCC---chhhHHHHHHHHHhhhcc-CchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh--
Confidence 46667888899999886543 255667788889999998 9999999999999999999999984 455566543
Q ss_pred CCHHHHHHHHHHHHHHHHHHH-HCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-ceecccCCCcccchhhh
Q 008475 197 YSERKAAELTRIIVGVVEACH-SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-IFTDVVGSPYYVAPEVL 274 (564)
Q Consensus 197 ~~~~~~~~i~~qi~~~l~~lH-~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~ 274 (564)
+...+..-+.||+.||.+|| +.+++|++|..+.|+| +..|..||++|-++....... .......-..|..|+.+
T Consensus 102 -~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 102 -GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEI 177 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhc
Confidence 37788889999999999997 6789999999999999 788999999998765432111 01111112245666654
Q ss_pred hhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH---
Q 008475 275 LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAH--- 351 (564)
Q Consensus 275 ~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~--- 351 (564)
... .-..|.|-|||++++++.|..+ ...... .. ..++.....+..+-+.-.+..||..-
T Consensus 178 ~~s-~~s~D~~~Lg~li~el~ng~~~--~~~~~~-----~~----------~~ipk~~~~~~~k~~~~~~~~r~n~~~~~ 239 (690)
T KOG1243|consen 178 DPS-EWSIDSWGLGCLIEELFNGSLL--TKTDLS-----NT----------GKIPKALIELYCKKLGATELKRPNKLRFI 239 (690)
T ss_pred Ccc-ccchhhhhHHHHHHHHhCcccC--cchhhh-----cc----------CccchhHHHHHHHHhccccccccchhhHH
Confidence 311 1346999999999999999332 111110 00 12333444455455555566666432
Q ss_pred --HHhcCCCcCCC
Q 008475 352 --EVLCHPWICEN 362 (564)
Q Consensus 352 --~vl~hp~~~~~ 362 (564)
-.+-|+||++.
T Consensus 240 ~~~~~~~gff~n~ 252 (690)
T KOG1243|consen 240 LECRLLGGFFRND 252 (690)
T ss_pred HHHHhccccccch
Confidence 23348898764
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.3e-12 Score=111.62 Aligned_cols=123 Identities=21% Similarity=0.277 Sum_probs=106.2
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~ 517 (564)
..+...|..+|.+++|.|+++||..++..+......+.+..+|+.+|.+++|.|+.+||..++... ....+.+..+|
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F 90 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAF 90 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 346778999999999999999999877655444456678999999999999999999999988653 24556789999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.+++|.|+.+||..++...+..++...+..+|..+|.+++|+
T Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~ 136 (149)
T PTZ00184 91 KVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 136 (149)
T ss_pred HhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCc
Confidence 9999999999999999999988766778899999999999999995
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-11 Score=107.22 Aligned_cols=148 Identities=21% Similarity=0.219 Sum_probs=111.6
Q ss_pred ecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH-----HhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 103 LGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR-----EDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 103 ~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
....|-+|+-+.|+++. ..|+.+.||.-..+....+ -...+.++|.++|.++. --.|.-..=++.+...-+|
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeE
Confidence 35578899999999998 5688888886443333222 23456788999999987 4455444445667777789
Q ss_pred EEeccCC-CchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 178 VMELCAG-GELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 178 v~e~~~~-~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
+|||++| .++.+++...- .........++++|-..+.-||..+|||+||..+||++.+.+....+.|+|||++...
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 9999976 47777776532 2333444789999999999999999999999999999987777777899999998754
|
|
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.8e-12 Score=122.33 Aligned_cols=132 Identities=25% Similarity=0.343 Sum_probs=107.6
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHH-hhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh-----hHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLR-RYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL-----EREEHL 479 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~-~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~-----~~~~~l 479 (564)
+-++.|+..|.|+||.++.+||..++. +-...+..-.++..+..+|.|+||+|+++||+.-+...... .....-
T Consensus 164 rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Er 243 (325)
T KOG4223|consen 164 RDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTER 243 (325)
T ss_pred HHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccH
Confidence 457789999999999999999999885 22344556668889999999999999999999877654321 112233
Q ss_pred HHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 480 VAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 480 ~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
.+.|..+|+|+||+++.+|++.++..-+ ....+...++.++|.|+||++|++|.+.-.
T Consensus 244 e~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~~ 303 (325)
T KOG4223|consen 244 EQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILEHY 303 (325)
T ss_pred HHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhhCc
Confidence 4778889999999999999999987655 567888999999999999999999988643
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.6e-11 Score=106.98 Aligned_cols=136 Identities=26% Similarity=0.277 Sum_probs=100.3
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHh-----HHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED-----VEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~-----~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
..+++|+-+.+|.+.. -|..+++|.=..+....++. ..+..+|..++.+++ --.|...+=+..+.....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 3578999999999865 34457777644444433332 345678999999987 445544444455667778999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
||++|..|.+.+... ...+++.+-..+.-||..||+|+||.++||++. .+.+.++|||++....
T Consensus 79 e~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~~s~ 142 (204)
T COG3642 79 EYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGEFSD 142 (204)
T ss_pred EEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCcccccc
Confidence 999988888887654 255677777778889999999999999999993 2349999999998643
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.3e-09 Score=109.70 Aligned_cols=212 Identities=16% Similarity=0.210 Sum_probs=155.3
Q ss_pred CCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec----CCeEEEEEeccCC-C
Q 008475 111 QFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----SLCVHIVMELCAG-G 185 (564)
Q Consensus 111 ~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----~~~~~lv~e~~~~-~ 185 (564)
--.+.|+|....+|..|++|++........ .....-+++++++. |+|||++.++|.. +..+++|++|.++ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~-h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLC-HTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhc-cCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 446789999999999999999954332222 12334567889997 9999999999873 5678999999975 4
Q ss_pred chHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 186 ELFDRIIQR---------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 186 ~L~~~l~~~---------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
+|.++.... ...++..++.++.||..||.++|+.|+.-+-|.|.+||+ +++.+++|+.-|..
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv---~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV---TGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe---eCcceEEEecccce
Confidence 777755322 246789999999999999999999999999999999999 56667888887776
Q ss_pred cccCCCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCC-CCCHHHH-HHHHHcCCccCCCCCCCCC
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFW-AETQQGI-FDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~-~~~~~~~-~~~i~~~~~~~~~~~~~~~ 328 (564)
.....+.. |-+. --.+-|.=.||.+++.|.||..--+ ....++. ++.|. +.+
T Consensus 441 Dvl~~d~~-------------~~le--~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~-----------~~y 494 (655)
T KOG3741|consen 441 DVLQEDPT-------------EPLE--SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT-----------TTY 494 (655)
T ss_pred eeecCCCC-------------cchh--HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh-----------hhh
Confidence 65544330 1111 1235688899999999999965422 2222222 33332 357
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
|.+++++|.-+...++.+ -++.+++.|
T Consensus 495 S~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 495 STDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred hHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 899999999998888876 667777654
|
|
| >KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.7e-11 Score=98.61 Aligned_cols=145 Identities=20% Similarity=0.411 Sum_probs=107.9
Q ss_pred hhhhhHHHHHhHhhhhhcccCCC-----CC------CCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhH
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDN-----SG------AITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFI 464 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~-----~G------~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~ 464 (564)
...|+..++-++...|..+..+- .| .+..+.+.+ +-++..++-+..+ -+.+..||.|.++|++|+
T Consensus 19 CTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~k-MPELkenpfk~ri---~e~FSeDG~GnlsfddFl 94 (189)
T KOG0038|consen 19 CTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEK-MPELKENPFKRRI---CEVFSEDGRGNLSFDDFL 94 (189)
T ss_pred cccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhh-ChhhhcChHHHHH---HHHhccCCCCcccHHHHH
Confidence 44567777777777787764431 11 345544443 3345555555444 445557999999999999
Q ss_pred HHHhhhchh-hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHH----HHHHHHhCCCCCcceeHHHHHHH
Q 008475 465 AATVHLNKL-EREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLL----EDIIREVDQDNDGRIDYGEFVAM 536 (564)
Q Consensus 465 ~~~~~~~~~-~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~----~~~~~~~d~d~dg~I~~~eF~~~ 536 (564)
.+++-+... ++.-++..||+.||.|+|++|..+++...+..+ +++++++ +.+++++|.||||+|++.||.++
T Consensus 95 DmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~ 174 (189)
T KOG0038|consen 95 DMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHV 174 (189)
T ss_pred HHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHH
Confidence 988766544 456677889999999999999999999998765 3888875 56889999999999999999999
Q ss_pred HHcCCCCC
Q 008475 537 MQKGNVGL 544 (564)
Q Consensus 537 ~~~~~~~~ 544 (564)
+.+.+..+
T Consensus 175 i~raPDFl 182 (189)
T KOG0038|consen 175 ILRAPDFL 182 (189)
T ss_pred HHhCcchH
Confidence 98775544
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.21 E-value=7.6e-11 Score=125.05 Aligned_cols=105 Identities=22% Similarity=0.315 Sum_probs=94.4
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhC-CCCCHHH---HHHHHHhcCCCCCCccchhhhHHHHhhhch
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTE---IRDLMDAADVDNSGTIDYGEFIAATVHLNK 472 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~-~~~~~~~---~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~ 472 (564)
..|+..+++.++++|..+|.|++|.+ +..+++.+| ..++..+ ++.+|..+|.+++|.|+|+||+.++..+..
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~ 210 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN 210 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc
Confidence 35677788999999999999999997 889999999 5888777 899999999999999999999999887665
Q ss_pred hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008475 473 LEREEHLVAAFQYFDKDGSGYITVDELQQACAE 505 (564)
Q Consensus 473 ~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~ 505 (564)
...++.+..+|+.+|.|++|+|+.+||..++..
T Consensus 211 ~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 211 LVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 566788999999999999999999999999876
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.6e-10 Score=109.86 Aligned_cols=144 Identities=27% Similarity=0.371 Sum_probs=105.5
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCC-CCccEEEEEEecC---CeEEEEEe
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH-KNIVTIKGAYEDS---LCVHIVME 180 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~niv~~~~~~~~~---~~~~lv~e 180 (564)
+.||.|..+.||++... +|..+++|........ .....+..|.++++.+..+ .++++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 56899999999999864 3678999987643321 1345678999999999742 3467788776653 36789999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 008475 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS------------------------------------------ 218 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~------------------------------------------ 218 (564)
|++|.++...+.. ..+++.....++.+++.+|.+||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9999888765432 346677777777777777777773
Q ss_pred --------------CCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 219 --------------LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 219 --------------~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
..++|+|++|.||++... ..+.+.|+||+.+...
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~g 207 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEeccccccC
Confidence 236899999999999321 1456899999988753
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.5e-10 Score=99.96 Aligned_cols=130 Identities=30% Similarity=0.429 Sum_probs=101.6
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhH
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~ 475 (564)
...|+.+.. +-+-..||.+++|.|+..||+.++..+ +.|+.+|..+|.|++|+|+..|+..++..+.....
T Consensus 88 ~~~Fs~~Tc---rlmI~mfd~~~~G~i~f~EF~~Lw~~i------~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Ls 158 (221)
T KOG0037|consen 88 WSPFSIETC---RLMISMFDRDNSGTIGFKEFKALWKYI------NQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLS 158 (221)
T ss_pred CCCCCHHHH---HHHHHHhcCCCCCccCHHHHHHHHHHH------HHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCC
Confidence 445555554 334456788999999999999888864 66888999999999999999999888887777777
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcc--eeHHHHHHHHH
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGR--IDYGEFVAMMQ 538 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~--I~~~eF~~~~~ 538 (564)
.+....++++||..++|.|.+++|..++. .-.-+.+.|.+.|.+.+|. |+|++|+.+..
T Consensus 159 pq~~~~lv~kyd~~~~g~i~FD~FI~ccv----~L~~lt~~Fr~~D~~q~G~i~~~y~dfl~~t~ 219 (221)
T KOG0037|consen 159 PQFYNLLVRKYDRFGGGRIDFDDFIQCCV----VLQRLTEAFRRRDTAQQGSITISYDDFLQMTM 219 (221)
T ss_pred HHHHHHHHHHhccccCCceeHHHHHHHHH----HHHHHHHHHHHhccccceeEEEeHHHHHHHhh
Confidence 77788889999877789999999988883 3345677888888887774 68899987653
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.8e-10 Score=90.92 Aligned_cols=65 Identities=23% Similarity=0.392 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhCC-CCCCceeHHHHHHHHHh-CC--CCH-HHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFDK-DGSGYITVDELQQACAE-HN--MTD-VLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D~-d~dG~I~~~e~~~~l~~-~~--~~~-~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...+..+|+.||. +++|+|+.+||+.++.. +| +++ ++++++|..+|.|+||.|+|+||+.+|.++
T Consensus 7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 4568899999999 99999999999999988 77 777 899999999999999999999999999866
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.7e-10 Score=84.38 Aligned_cols=60 Identities=47% Similarity=0.855 Sum_probs=52.1
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHH----HHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 478 HLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDV----LLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 478 ~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~----~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
.++++|+.+|+|++|+|+.+||..++..++ +++. .++.+|..+|.|+||.|+++||+++|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 367899999999999999999999999887 3344 45556999999999999999999875
|
... |
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.4e-09 Score=96.60 Aligned_cols=141 Identities=18% Similarity=0.193 Sum_probs=107.2
Q ss_pred CCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC-CCCccchhhhHHHHhhhc-hhhHHHHHHHHHHHhCCCCCCceeHHH
Q 008475 421 AITFDELKAGLRRYGSTLKDTEIRDLMDAADVD-NSGTIDYGEFIAATVHLN-KLEREEHLVAAFQYFDKDGSGYITVDE 498 (564)
Q Consensus 421 ~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~-~~~~~~~l~~~F~~~D~d~dG~I~~~e 498 (564)
.+..+.+..+.+ ....+..++..++..+-.+ .+|.++-++|..+...+- ..........+|+.+|.|+||.|++.|
T Consensus 8 ~~~~~~~e~l~~--~t~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~E 85 (193)
T KOG0044|consen 8 KLQPESLEQLVQ--QTKFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLE 85 (193)
T ss_pred cCCcHHHHHHHH--hcCCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHH
Confidence 344344444433 3455788888888888655 489999999988765433 455677788999999999999999999
Q ss_pred HHHHHHhC--CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC----C-------CCCChHHHHHHHhHHccCCCCC
Q 008475 499 LQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG----N-------VGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 499 ~~~~l~~~--~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~----~-------~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
|...+... |-.++.+.=.|..+|.|+||.|+++|+++++... + .....+...++|+++|.|+||.
T Consensus 86 fi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~ 163 (193)
T KOG0044|consen 86 FICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGK 163 (193)
T ss_pred HHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCc
Confidence 98887653 5566677778999999999999999999977642 1 1123566789999999999994
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.8e-09 Score=102.13 Aligned_cols=240 Identities=17% Similarity=0.225 Sum_probs=161.3
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEE-------ecCC
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY-------EDSL 173 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~-------~~~~ 173 (564)
...++.||+|+-+.+|..-... ..+.|++..... ... .+-+..|...-.||-+..=+.+- ....
T Consensus 13 i~~gr~LgqGgea~ly~l~e~~---d~VAKIYh~Ppp---a~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~ 83 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLGEVR---DQVAKIYHAPPP---AAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGK 83 (637)
T ss_pred cCCCccccCCccceeeecchhh---chhheeecCCCc---hHH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccc
Confidence 3457889999999999755322 235677654321 111 12334455555566544312111 1233
Q ss_pred eEEEEEeccCCCchHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEee
Q 008475 174 CVHIVMELCAGGELFDRII-------QRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAID 246 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~D 246 (564)
...+.|..++|..=-..+. ......+.-+..+++.|+.+...||..|.+-+|+.++|+|+ .+.+.+.|+|
T Consensus 84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lV---sd~~~V~LVd 160 (637)
T COG4248 84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLV---SDDSKVVLVD 160 (637)
T ss_pred eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceee---ecCceEEEEc
Confidence 3778888887652222221 12346778899999999999999999999999999999999 6777899998
Q ss_pred CCCccccCCCCceecccCCCcccchhhhh-h-----cCCCcchHHHHHHHHHHHHhC-CCCCCCCCH----HHHHH-HHH
Q 008475 247 FGLSVFFKPGQIFTDVVGSPYYVAPEVLL-K-----HYGPEADVWTAGVILYILLSG-VPPFWAETQ----QGIFD-AVL 314 (564)
Q Consensus 247 fG~~~~~~~~~~~~~~~gt~~y~aPE~~~-~-----~~~~~~DvwSlG~il~elltg-~~pf~~~~~----~~~~~-~i~ 314 (564)
-..-.....+..+...+|...|.+||.-+ + .-+...|.|.||+++++||.| +.||.+... ..-++ .|.
T Consensus 161 sDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia 240 (637)
T COG4248 161 SDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIA 240 (637)
T ss_pred ccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhh
Confidence 76555545666777889999999999876 3 246679999999999999986 999965321 01111 233
Q ss_pred cCCccC------------CCCCCCCCCHHHHHHHHHhccc--CCCCCCCHHH
Q 008475 315 KGHIDF------------ESDPWPLISDSAKDLIRKMLCS--QPSERLTAHE 352 (564)
Q Consensus 315 ~~~~~~------------~~~~~~~~s~~~~~li~~~l~~--dp~~R~s~~~ 352 (564)
.|.+.+ ...+|..+++.++.|..+|+.. ++.-|||++.
T Consensus 241 ~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 241 HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 322221 1234556889999999999864 3678999753
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.9e-09 Score=101.60 Aligned_cols=139 Identities=22% Similarity=0.189 Sum_probs=97.6
Q ss_pred CCeEEEEEEEccCCcEEEEEEeccccCC----C----HHhHHHHHHHHHHHHhhcCCCCc--cEEEEEEec-----CCeE
Q 008475 111 QFGTTYLCTEIATGIEFACKSISKRKLI----S----REDVEDVRREIQIMHHLAGHKNI--VTIKGAYED-----SLCV 175 (564)
Q Consensus 111 ~fg~V~~~~~~~~~~~vavK~~~~~~~~----~----~~~~~~~~~E~~~l~~l~~h~ni--v~~~~~~~~-----~~~~ 175 (564)
.-..|+++. ..|+.|.||........ . ......+.+|...+.+|. .-+| +.++.+.+. ...-
T Consensus 34 ~~rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~~~~~s 110 (268)
T PRK15123 34 EGRRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLH-EVGVDTMTGVAFGERGSNPATRTS 110 (268)
T ss_pred CCceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCCcccee
Confidence 334466654 35678999976432210 0 011124778999998886 3333 344555543 2357
Q ss_pred EEEEeccCCC-chHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeec----CCCCCcEEEeeCC
Q 008475 176 HIVMELCAGG-ELFDRIIQ--RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN----KDDDFSLKAIDFG 248 (564)
Q Consensus 176 ~lv~e~~~~~-~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~----~~~~~~~kl~DfG 248 (564)
+||||++++. +|.+++.. ....+......++.+++..+.-||..||+|+|+++.|||+.. .++...+.|+||+
T Consensus 111 ~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~ 190 (268)
T PRK15123 111 FIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLH 190 (268)
T ss_pred EEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECC
Confidence 8999999875 78888753 345667788899999999999999999999999999999953 1235789999999
Q ss_pred Cccc
Q 008475 249 LSVF 252 (564)
Q Consensus 249 ~~~~ 252 (564)
.+..
T Consensus 191 r~~~ 194 (268)
T PRK15123 191 RAQI 194 (268)
T ss_pred cccc
Confidence 8864
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.03 E-value=5.4e-10 Score=88.26 Aligned_cols=69 Identities=22% Similarity=0.323 Sum_probs=62.7
Q ss_pred HHHHhHhhhhhcccC-CCCCCCCHHHHHHHHHh-hCCCCCH-HHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 402 EEIAGLKEMFKAMDT-DNSGAITFDELKAGLRR-YGSTLKD-TEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 402 ~~~~~l~~~F~~~D~-d~~G~I~~~el~~~l~~-~~~~~~~-~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
..+..|..+|+.||. +++|+|+..||+.++.. ++..++. .+++.++..+|.|+||.|+|+||..++..+
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 446679999999999 99999999999999998 8887887 999999999999999999999998887654
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >KOG4251 consensus Calcium binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.4e-10 Score=99.39 Aligned_cols=159 Identities=15% Similarity=0.174 Sum_probs=112.0
Q ss_pred HHhHhhhhhcccCCCCCCCCHHHHHHHHHhh-C--CCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHH----
Q 008475 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRY-G--STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE---- 476 (564)
Q Consensus 404 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-~--~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~---- 476 (564)
.+.|+.+|++.|.|-||.|+..|+++++..- . ..-..++-+..|.++|+||||.|+|+||...+....+....
T Consensus 100 rrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekevad 179 (362)
T KOG4251|consen 100 RRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVAD 179 (362)
T ss_pred HHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHHH
Confidence 4568899999999999999999999998752 1 12224455678999999999999999998766544322111
Q ss_pred ----------HHHHHHHHHhCCCCCCcee---------HHHHHHHHHhC---CCCHHHHHHHHHHhCCCCCcceeHHHHH
Q 008475 477 ----------EHLVAAFQYFDKDGSGYIT---------VDELQQACAEH---NMTDVLLEDIIREVDQDNDGRIDYGEFV 534 (564)
Q Consensus 477 ----------~~l~~~F~~~D~d~dG~I~---------~~e~~~~l~~~---~~~~~~~~~~~~~~d~d~dg~I~~~eF~ 534 (564)
+.-.+.|-.-+++..|..+ .+||..+|... |+-...|.+++..+|.|+|..++..||+
T Consensus 180 airlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFi 259 (362)
T KOG4251|consen 180 AIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFI 259 (362)
T ss_pred HhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhh
Confidence 1112344444555555544 48998888642 4456778999999999999999999999
Q ss_pred HHHHcCCCCCCh---------HHHHHHHhHHccCCCC
Q 008475 535 AMMQKGNVGLGR---------RTMRNSLNMSMRDAPG 562 (564)
Q Consensus 535 ~~~~~~~~~~~~---------~~~~~~f~~~D~~~~g 562 (564)
.+.......++. ....+.-...|.++||
T Consensus 260 slpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDG 296 (362)
T KOG4251|consen 260 SLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDG 296 (362)
T ss_pred cCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCcc
Confidence 877665444321 2223333445999999
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.4e-09 Score=97.80 Aligned_cols=130 Identities=25% Similarity=0.233 Sum_probs=82.6
Q ss_pred EEEEEEEccCCcEEEEEEeccccCC----------------------C-HHhHHHHHHHHHHHHhhcCC-CCccEEEEEE
Q 008475 114 TTYLCTEIATGIEFACKSISKRKLI----------------------S-REDVEDVRREIQIMHHLAGH-KNIVTIKGAY 169 (564)
Q Consensus 114 ~V~~~~~~~~~~~vavK~~~~~~~~----------------------~-~~~~~~~~~E~~~l~~l~~h-~niv~~~~~~ 169 (564)
.||.|.. ..|..+|+|+....... . .......++|.+.|.++... -++++++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4899985 56779999987532110 0 11134567899999999743 2577887653
Q ss_pred ecCCeEEEEEeccC--CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHHCCCEeecCCCCcEEeecCCCCCcEEEee
Q 008475 170 EDSLCVHIVMELCA--GGELFDRIIQRGHYSERKAAELTRIIVGVVEA-CHSLGVMHRDLKPENFLLVNKDDDFSLKAID 246 (564)
Q Consensus 170 ~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~-lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~D 246 (564)
.-+|||||++ |..+.. +... .++......++.+++..+.. +|..||+|+||.+.|||+ +++ .+.|+|
T Consensus 80 ----~~~ivME~I~~~G~~~~~-l~~~-~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv---~~~-~~~iID 149 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPR-LKDV-DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILV---DDG-KVYIID 149 (188)
T ss_dssp ----TTEEEEE--EETTEEGGC-HHHC-GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEE---ETT-CEEE--
T ss_pred ----CCEEEEEecCCCccchhh-HHhc-cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEe---ecc-eEEEEe
Confidence 2369999997 555543 3322 22245667777888885554 689999999999999999 333 799999
Q ss_pred CCCccccC
Q 008475 247 FGLSVFFK 254 (564)
Q Consensus 247 fG~~~~~~ 254 (564)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99987654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.2e-10 Score=118.18 Aligned_cols=149 Identities=19% Similarity=0.292 Sum_probs=110.5
Q ss_pred HHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCce-----e-----cccCCCcccchhhhhh-cC
Q 008475 211 GVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF-----T-----DVVGSPYYVAPEVLLK-HY 278 (564)
Q Consensus 211 ~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~-----~-----~~~gt~~y~aPE~~~~-~~ 278 (564)
.|+.++|. .++||++|.|++|.+ +..+..||+.|+++....++..+ . -..-...|.|||++.. ..
T Consensus 110 dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~ 186 (700)
T KOG2137|consen 110 DGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTN 186 (700)
T ss_pred chhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccc
Confidence 89999996 589999999999999 78889999999998765542211 1 1223567999999986 47
Q ss_pred CCcchHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHcCCccCC-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 279 GPEADVWTAGVILYILL-SGVPPFWAETQQGIFDAVLKGHIDFE-SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 279 ~~~~DvwSlG~il~ell-tg~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+.++|+||+||++|-+. .|+..+........... ........ ......+++++++-|.++|..++.-||++..++.-
T Consensus 187 ~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~-~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~ 265 (700)
T KOG2137|consen 187 TPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF-SRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSI 265 (700)
T ss_pred cccccceeeeeEEEEEecCCcchhhccCCcchhhh-hhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcc
Confidence 88999999999999998 56665554433222211 11111100 11124688999999999999999999999999999
Q ss_pred CCcCCCC
Q 008475 357 PWICENG 363 (564)
Q Consensus 357 p~~~~~~ 363 (564)
|||....
T Consensus 266 ~ff~D~~ 272 (700)
T KOG2137|consen 266 PFFSDPG 272 (700)
T ss_pred cccCCch
Confidence 9999754
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.1e-09 Score=84.12 Aligned_cols=65 Identities=20% Similarity=0.451 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhC-CCCCC-ceeHHHHHHHHHh-----CC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFD-KDGSG-YITVDELQQACAE-----HN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D-~d~dG-~I~~~e~~~~l~~-----~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...+..+|+.|| +|++| .|+.+||+.+|+. +| .++++++++++.+|.|+||.|+|+||+.++...
T Consensus 7 ~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 7 MVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 456889999998 79999 6999999999998 66 678899999999999999999999999988654
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=98.95 E-value=9.1e-10 Score=82.79 Aligned_cols=61 Identities=36% Similarity=0.650 Sum_probs=45.4
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHH----HHHHHHhcCCCCCCccchhhhHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE----IRDLMDAADVDNSGTIDYGEFIAA 466 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~----~~~~~~~~D~~~~g~I~~~eF~~~ 466 (564)
+|+++|+.+|.|++|+|+.+||..++..++....... ++.+|..+|.++||.|+|+||..+
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNF 65 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence 4678888888888888888888888888876555433 344477777777777777777654
|
... |
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1e-08 Score=99.90 Aligned_cols=121 Identities=20% Similarity=0.313 Sum_probs=108.1
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh-hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL-EREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIR 518 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~-~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~ 518 (564)
+..++.+|+.+|.+++|.|+..+....+..+... ...+.....|+..|.|.||.++.+||++++.. .+.++-.+|.
T Consensus 13 ~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~---~E~~l~~~F~ 89 (463)
T KOG0036|consen 13 DIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN---KELELYRIFQ 89 (463)
T ss_pred HHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH---hHHHHHHHHh
Confidence 4557889999999999999999998877666554 45677788999999999999999999999964 4667888999
Q ss_pred HhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 519 EVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 519 ~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..|.++||.|+-+|.-+.+.+.+..+.++.+.++|.-.|++|+++
T Consensus 90 ~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~ 134 (463)
T KOG0036|consen 90 SIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKAT 134 (463)
T ss_pred hhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCee
Confidence 999999999999999999999999999999999999999999875
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.3e-09 Score=83.35 Aligned_cols=68 Identities=19% Similarity=0.363 Sum_probs=61.6
Q ss_pred HHHHhHhhhhhccc-CCCCC-CCCHHHHHHHHHh-----hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 402 EEIAGLKEMFKAMD-TDNSG-AITFDELKAGLRR-----YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 402 ~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
..+..+.++|+.+| .|++| .|+.+||+.+++. ++..++.++++.+++.+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34567899999998 79999 5999999999998 888899999999999999999999999999887654
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.1e-08 Score=95.96 Aligned_cols=139 Identities=22% Similarity=0.251 Sum_probs=103.7
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccC-----------------CC--HHhHHHHHHHHHHHHhhcCC-C
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL-----------------IS--REDVEDVRREIQIMHHLAGH-K 160 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~-----------------~~--~~~~~~~~~E~~~l~~l~~h-~ 160 (564)
+.++.+||-|.-+.||.|.+. .|.++|||.-+.... .+ .......++|.++|.+|.++ -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 567889999999999999964 788999997532211 00 11234567899999999744 3
Q ss_pred CccEEEEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCC
Q 008475 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240 (564)
Q Consensus 161 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~ 240 (564)
.|++.+++ +...+|||+++|-.|... ++..+.+..++..|+.-+.-+-..||||+|+.+=||++ +++|
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV---~~dg 239 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV---TEDG 239 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE---ecCC
Confidence 67777764 567899999998776542 22456666677777776666668999999999999999 7788
Q ss_pred cEEEeeCCCccc
Q 008475 241 SLKAIDFGLSVF 252 (564)
Q Consensus 241 ~~kl~DfG~~~~ 252 (564)
.+.++||--+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 899999965544
|
|
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.2e-09 Score=86.89 Aligned_cols=87 Identities=21% Similarity=0.325 Sum_probs=57.6
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCC--CCcceeHHHHHHHHHcCCC---CCChHHH
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQD--NDGRIDYGEFVAMMQKGNV---GLGRRTM 549 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d--~dg~I~~~eF~~~~~~~~~---~~~~~~~ 549 (564)
..++.+|..||..+||.|+..+..++|+.+| .++.+|.+.+.+.+.+ +-.+|+|++|+.+++.... ..+.+++
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~t~edf 90 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQGTYEDF 90 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccCcHHHH
Confidence 4566677777777777777777777777766 5666777766666655 3356777777776665533 2356677
Q ss_pred HHHHhHHccCCCCC
Q 008475 550 RNSLNMSMRDAPGS 563 (564)
Q Consensus 550 ~~~f~~~D~~~~g~ 563 (564)
.+.++.||++|+|+
T Consensus 91 vegLrvFDkeg~G~ 104 (152)
T KOG0030|consen 91 VEGLRVFDKEGNGT 104 (152)
T ss_pred HHHHHhhcccCCcc
Confidence 77777777777764
|
|
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.4e-08 Score=85.36 Aligned_cols=85 Identities=20% Similarity=0.404 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCC-ChHHHHH
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGL-GRRTMRN 551 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~-~~~~~~~ 551 (564)
...++++||..+|.|+||+|+.++|+..+..+| .++++++.|+.++ .|-|+|--|+.++...-.+. +++.+.+
T Consensus 30 QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~gtdpe~~I~~ 105 (171)
T KOG0031|consen 30 QIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMFGEKLNGTDPEEVILN 105 (171)
T ss_pred HHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhcCCCHHHHHHH
Confidence 345678899999999999999999999998888 7888888888764 46899999999887765555 4677889
Q ss_pred HHhHHccCCCCC
Q 008475 552 SLNMSMRDAPGS 563 (564)
Q Consensus 552 ~f~~~D~~~~g~ 563 (564)
+|++||.+|.|+
T Consensus 106 AF~~FD~~~~G~ 117 (171)
T KOG0031|consen 106 AFKTFDDEGSGK 117 (171)
T ss_pred HHHhcCccCCCc
Confidence 999999998885
|
|
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.88 E-value=3e-08 Score=96.87 Aligned_cols=131 Identities=22% Similarity=0.381 Sum_probs=102.5
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHh-hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-----hh------
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRR-YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-----KL------ 473 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~-~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-----~~------ 473 (564)
.|.+.|+.+|.+..|.|+...+..+++. .+.++...-+..-+.. .+.||.|.|.+.+..+..-. ..
T Consensus 465 dL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~--~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetL 542 (631)
T KOG0377|consen 465 DLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLAN--GSDDGKVEYKSTLDNLDTEVILEEAGSSLVETL 542 (631)
T ss_pred HHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccC--CCcCcceehHhHHHHhhhhhHHHHHHhHHHHHH
Confidence 5788999999999999999999999986 5677775544443333 34567899988765542110 00
Q ss_pred -hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 474 -EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 474 -~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
.....+..+|+.+|.|++|.|+.+||+.+++-++ ++++++.++-+.+|.|+||.|++.||++.+.
T Consensus 543 Yr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFr 614 (631)
T KOG0377|consen 543 YRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFR 614 (631)
T ss_pred HhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHh
Confidence 1135678899999999999999999999876432 7899999999999999999999999998765
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=98.87 E-value=1e-08 Score=109.14 Aligned_cols=124 Identities=15% Similarity=0.195 Sum_probs=93.5
Q ss_pred hhhcccCCCCCCCCHHHHHHHHHh-h--CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhhHHH---HHHHH
Q 008475 410 MFKAMDTDNSGAITFDELKAGLRR-Y--GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLEREE---HLVAA 482 (564)
Q Consensus 410 ~F~~~D~d~~G~I~~~el~~~l~~-~--~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~~~~---~l~~~ 482 (564)
.|+.+|++ .++.+++...... + ......+++.+.|..+|.|++|.+ .. .++..+. ...++. .+..+
T Consensus 112 ~~~~~~~~---~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dgdG~i-Lg---~ilrslG~~~pte~e~~fi~~m 184 (644)
T PLN02964 112 RISVFETN---RLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSSSNKV-VG---SIFVSCSIEDPVETERSFARRI 184 (644)
T ss_pred EEEEEecC---CCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCCCCcC-HH---HHHHHhCCCCCCHHHHHHHHHH
Confidence 67777766 5666666654432 1 111234567888999999999987 33 3333333 123333 38899
Q ss_pred HHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 483 FQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 483 F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
|+.+|.|++|.|+.+||..++..++ .+++++.++|..+|.|++|.|+++||.+++..+
T Consensus 185 f~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 185 LAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred HHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 9999999999999999999998776 678899999999999999999999999999884
|
|
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.9e-09 Score=77.88 Aligned_cols=60 Identities=30% Similarity=0.472 Sum_probs=56.4
Q ss_pred HHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 480 VAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 480 ~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
+.+|+.+|.+++|.|+.+|+..++...|++++++.+++..+|.+++|.|+|+||+.++..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999998864
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.7e-09 Score=82.56 Aligned_cols=64 Identities=22% Similarity=0.524 Sum_probs=55.8
Q ss_pred HHHHHHHHHhC-CCCCC-ceeHHHHHHHHHh-C-----C-CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 477 EHLVAAFQYFD-KDGSG-YITVDELQQACAE-H-----N-MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 477 ~~l~~~F~~~D-~d~dG-~I~~~e~~~~l~~-~-----~-~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
..+..+|..|| +|++| .|+.+||+.++.. . + .++.+|++++.++|.|+||.|+|+||+.++..+
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 45778899999 78998 5999999999965 2 1 467899999999999999999999999999766
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.7e-08 Score=82.00 Aligned_cols=66 Identities=26% Similarity=0.362 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
....+..+|..+|.+++|.|+.+|++.+++..|++++++++++..+|.+++|.|+|+||+.++...
T Consensus 8 ~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 8 DKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred HHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999999999999999999999999987643
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.1e-08 Score=91.39 Aligned_cols=110 Identities=22% Similarity=0.303 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHhhcCCCC--ccEEEEEEecC----CeEEEEEeccCCC-chHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 008475 143 VEDVRREIQIMHHLAGHKN--IVTIKGAYEDS----LCVHIVMELCAGG-ELFDRIIQRGHYSERKAAELTRIIVGVVEA 215 (564)
Q Consensus 143 ~~~~~~E~~~l~~l~~h~n--iv~~~~~~~~~----~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~ 215 (564)
..+..+|...+..|. .-. ++..+++.+.. ...++|+|++++. +|.+++......+......++.+++..+.-
T Consensus 55 ~~ra~~E~~~~~~L~-~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 55 RSRAKREWRNLQRLR-EAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAK 133 (206)
T ss_pred chHHHHHHHHHHHHH-HcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHH
Confidence 346778888888876 333 45566665542 2468999999874 788888775557788889999999999999
Q ss_pred HHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 216 lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
||++||+|+|++|.|||+...+....+.|+||+.+...
T Consensus 134 lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 134 LHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999999999999965444558999999987653
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.81 E-value=2e-08 Score=79.58 Aligned_cols=64 Identities=19% Similarity=0.459 Sum_probs=57.0
Q ss_pred HHHHHHHHHhCC-CC-CCceeHHHHHHHHHh---CC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 477 EHLVAAFQYFDK-DG-SGYITVDELQQACAE---HN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 477 ~~l~~~F~~~D~-d~-dG~I~~~e~~~~l~~---~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
..+..+|.+||. ++ +|+|+.+||+.++.. +| +++++++++++.+|.|++|.|+|+||+.++..+
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 456788999997 77 899999999999962 45 789999999999999999999999999998765
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.4e-08 Score=82.45 Aligned_cols=71 Identities=30% Similarity=0.491 Sum_probs=64.0
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
.++.+++..++++|..+|.+++|.|+.+|+..+++..+ ++.++++.+|..+|.+++|.|+|+||+.++...
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 35778899999999999999999999999999999865 578899999999999999999999999877543
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.1e-08 Score=80.61 Aligned_cols=69 Identities=20% Similarity=0.375 Sum_probs=58.8
Q ss_pred HHHHhHhhhhhccc-CCCCC-CCCHHHHHHHHHh-h----CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 402 EEIAGLKEMFKAMD-TDNSG-AITFDELKAGLRR-Y----GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 402 ~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~-~----~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
..+..+.++|+.+| .|++| +|+..||+.++.. + ....+..+++.++..+|.+++|.|+|+||+.++..+
T Consensus 7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 44667889999999 78998 5999999999976 3 334577899999999999999999999999887654
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.3e-08 Score=79.23 Aligned_cols=70 Identities=24% Similarity=0.449 Sum_probs=61.5
Q ss_pred HHHHHhHhhhhhcccC-CC-CCCCCHHHHHHHHHh---hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 401 EEEIAGLKEMFKAMDT-DN-SGAITFDELKAGLRR---YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 401 ~~~~~~l~~~F~~~D~-d~-~G~I~~~el~~~l~~---~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
++.+..|-.+|+.+|. ++ +|+|+.+||+.++.. +|..++.+++.++++.+|.+++|.|+|+||+.++..+
T Consensus 6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 3456678899999998 67 899999999999963 6888999999999999999999999999998877543
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.2e-08 Score=79.95 Aligned_cols=65 Identities=23% Similarity=0.532 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhCC-CC-CCceeHHHHHHHHHh-----CC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFDK-DG-SGYITVDELQQACAE-----HN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D~-d~-dG~I~~~e~~~~l~~-----~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...+..+|..||. |+ +|.|+.+||+.+++. +| +++++++.++..+|.+++|.|+|+||+.++...
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4568899999997 97 699999999999975 23 688999999999999999999999999988754
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.2e-08 Score=79.63 Aligned_cols=68 Identities=21% Similarity=0.383 Sum_probs=59.0
Q ss_pred HHHhHhhhhhccc-CCCCCC-CCHHHHHHHHHh-hC----CCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 403 EIAGLKEMFKAMD-TDNSGA-ITFDELKAGLRR-YG----STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 403 ~~~~l~~~F~~~D-~d~~G~-I~~~el~~~l~~-~~----~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
.+..++++|+.+| .+++|+ |+..||+.+|+. ++ ..++..+++.+|..+|.+++|.|+|+||+.++..+
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 3467999999997 999995 999999999985 44 35688999999999999999999999999877644
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.6e-08 Score=78.72 Aligned_cols=65 Identities=25% Similarity=0.480 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhC-CCCCC-ceeHHHHHHHHHh-CC------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFD-KDGSG-YITVDELQQACAE-HN------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D-~d~dG-~I~~~e~~~~l~~-~~------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+.+..+|..|| .+++| .|+.+||+.+|+. +| +++++++++|..+|.|++|.|+|+||+.++...
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 466889999997 99999 5999999999975 43 478899999999999999999999999988755
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.4e-08 Score=77.19 Aligned_cols=65 Identities=25% Similarity=0.456 Sum_probs=56.6
Q ss_pred HHHHHHHHHH-hCCCCCC-ceeHHHHHHHHHhC-------CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQY-FDKDGSG-YITVDELQQACAEH-------NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~-~D~d~dG-~I~~~e~~~~l~~~-------~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...+..+|.. +|++++| .|+.+||+.++... ...+.++++++..+|.|+||.|+|+||+.++..+
T Consensus 8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 4567889999 6788886 99999999999764 2567899999999999999999999999998765
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=3e-07 Score=84.48 Aligned_cols=142 Identities=15% Similarity=0.112 Sum_probs=100.2
Q ss_pred ccccCCeEEEEEEEccCCcEEEEEEeccccCCC---HHhHHHHHHHHHHHHhhcC-CCCccEEEEEEe-c----CCeEEE
Q 008475 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLIS---REDVEDVRREIQIMHHLAG-HKNIVTIKGAYE-D----SLCVHI 177 (564)
Q Consensus 107 lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~~-h~niv~~~~~~~-~----~~~~~l 177 (564)
-|.||.+-|+.... .|..+-+|.-......+ +.....+.+|+..|.+|.. .-.++++. ++. . ...-+|
T Consensus 26 ~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 45688899998763 34468888764221111 3355678999999999872 12244544 222 1 234789
Q ss_pred EEeccCC-CchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 178 VMELCAG-GELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 178 v~e~~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
|+|-+.| .+|.+++... .+.+......++.+++.++.-||+.|+.|+|+-+.|||+... +...++++||--++.
T Consensus 103 VTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~-g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTE-GKAEAGFLDLEKSRR 179 (216)
T ss_pred EEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCC-CCeeEEEEEhhccch
Confidence 9998854 4887777553 346778888999999999999999999999999999999422 223499999976553
|
|
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.70 E-value=9.2e-08 Score=86.38 Aligned_cols=99 Identities=21% Similarity=0.335 Sum_probs=82.7
Q ss_pred HhhhhhcccCCCCCC-CCHHHHHHHHHhhCCCCC-HHHHHHHHHhcCCCCCCccchhhhHHHHhhhch-------hhHHH
Q 008475 407 LKEMFKAMDTDNSGA-ITFDELKAGLRRYGSTLK-DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK-------LEREE 477 (564)
Q Consensus 407 l~~~F~~~D~d~~G~-I~~~el~~~l~~~~~~~~-~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~-------~~~~~ 477 (564)
..+++..+|++++|. |+.++|...+..+..... .+.++-.|+.+|.+++|.|+.+|+..++..+-. ...+.
T Consensus 68 ~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~ 147 (187)
T KOG0034|consen 68 ADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLED 147 (187)
T ss_pred HHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHH
Confidence 356788888998888 999999999988665444 448999999999999999999999988765433 34456
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008475 478 HLVAAFQYFDKDGSGYITVDELQQACAE 505 (564)
Q Consensus 478 ~l~~~F~~~D~d~dG~I~~~e~~~~l~~ 505 (564)
.+...|..+|.|+||.|+.+||.+++..
T Consensus 148 i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 148 IVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 7788999999999999999999999853
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 564 | ||||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 1e-85 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 4e-82 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 5e-82 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 5e-82 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 2e-80 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-78 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 6e-77 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 7e-73 | ||
| 1s6i_A | 188 | Ca2+-Regulatory Region (Cld) From Soybean Calcium-D | 1e-66 | ||
| 2aao_A | 166 | Regulatory Apparatus Of Calcium Dependent Protein K | 2e-65 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 2e-59 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 7e-59 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 3e-58 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 2e-57 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-57 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-57 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 5e-57 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 6e-57 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-56 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 4e-56 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 9e-56 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 1e-55 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-55 | ||
| 2jam_B | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 9e-55 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 1e-54 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 1e-54 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 2e-53 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 6e-53 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 1e-52 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 3e-52 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 3e-51 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 3e-51 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 3e-51 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 4e-51 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 5e-51 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 6e-51 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 7e-51 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 7e-51 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 7e-51 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 8e-51 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 1e-50 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 1e-50 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-50 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 2e-50 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 2e-50 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 2e-50 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 2e-50 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 2e-50 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 2e-50 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 2e-50 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 3e-50 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 3e-50 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 7e-50 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 3e-48 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 4e-48 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 5e-48 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 7e-48 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 1e-47 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 2e-47 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 2e-47 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 1e-45 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 1e-45 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 1e-45 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 7e-43 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 7e-43 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 1e-42 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 1e-42 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 8e-42 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 1e-41 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 3e-41 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 3e-41 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 4e-41 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 4e-41 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 5e-41 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 6e-41 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 7e-41 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 7e-41 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 8e-41 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 8e-41 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 1e-39 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 2e-39 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-39 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 2e-39 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 2e-39 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 2e-39 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-39 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 3e-39 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 3e-39 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 3e-39 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 4e-39 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 4e-39 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-39 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 4e-39 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 4e-39 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 4e-39 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 4e-39 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 5e-39 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 6e-39 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 5e-38 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 1e-37 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 1e-37 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-37 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 3e-37 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 5e-37 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 5e-37 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 6e-37 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 6e-37 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 9e-37 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 1e-36 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 1e-36 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 1e-36 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 1e-36 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 1e-36 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 2e-36 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-36 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-36 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 2e-36 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 3e-36 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 3e-36 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 4e-36 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 4e-36 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-36 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 4e-36 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 4e-36 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 4e-36 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 4e-36 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 4e-36 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 5e-36 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 5e-36 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 6e-36 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 7e-36 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 8e-36 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 9e-36 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 9e-36 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 1e-35 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 1e-35 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 1e-35 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 1e-35 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-35 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-35 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-35 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-35 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 3e-35 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 3e-35 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 4e-35 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 6e-35 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 6e-35 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 9e-35 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 1e-34 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 1e-34 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-34 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 3e-34 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 4e-34 | ||
| 3kga_A | 299 | Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe | 5e-33 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 3e-32 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 1e-31 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 1e-31 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-31 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-31 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 3e-31 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 3e-31 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 3e-31 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 4e-31 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 4e-31 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 4e-31 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 5e-31 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 5e-31 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 5e-31 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 5e-31 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 5e-31 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 5e-31 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 5e-31 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 5e-31 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 5e-31 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 5e-31 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 5e-31 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 6e-31 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 6e-31 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 6e-31 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 6e-31 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 6e-31 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 6e-31 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 7e-31 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 7e-31 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 8e-31 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 8e-31 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 1e-30 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 1e-30 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 1e-30 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 1e-30 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 1e-30 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 1e-30 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 2e-30 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 2e-30 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 2e-30 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 2e-30 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 2e-30 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 2e-30 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 2e-30 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 2e-30 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 2e-30 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 2e-30 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 2e-30 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 2e-30 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 3e-30 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 3e-30 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 3e-30 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 3e-30 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 3e-30 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 3e-30 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 3e-30 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 3e-30 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 3e-30 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 4e-30 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 4e-30 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 4e-30 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 5e-30 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 5e-30 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 5e-30 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 5e-30 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 5e-30 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 5e-30 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 6e-30 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 7e-30 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 8e-30 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 9e-30 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 1e-29 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 1e-29 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 1e-29 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 1e-29 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 1e-29 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 1e-29 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 1e-29 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-29 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 3e-29 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 4e-29 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-28 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-28 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 5e-28 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 2e-27 | ||
| 1s6j_A | 87 | N-Terminal Region Of The Ca2+-Saturated Calcium Reg | 2e-27 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 2e-27 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 4e-27 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 4e-27 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 4e-27 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 4e-27 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 5e-27 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 5e-27 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 5e-27 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 7e-27 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 7e-27 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 1e-26 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 8e-26 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 8e-26 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 8e-26 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 8e-26 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 8e-26 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 8e-26 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 1e-25 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 1e-25 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-25 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-25 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 2e-25 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-25 | ||
| 3pm8_A | 197 | Cad Domain Of Pff0520w, Calcium Dependent Protein K | 2e-25 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 3e-25 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-25 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-25 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 4e-25 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 4e-25 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 4e-25 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 4e-25 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-25 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 5e-25 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 5e-25 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 5e-25 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 5e-25 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 5e-25 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 5e-25 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 5e-25 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 6e-25 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 6e-25 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 6e-25 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 7e-25 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 8e-25 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 9e-25 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 1e-24 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 1e-24 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 1e-24 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 2e-24 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-24 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-24 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 2e-24 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 3e-24 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 3e-24 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 4e-24 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 4e-24 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 4e-24 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 4e-24 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 4e-24 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 7e-24 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 1e-23 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 1e-23 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 2e-23 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 2e-23 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 2e-23 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 2e-23 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 3e-23 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 3e-23 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 3e-23 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 3e-23 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 3e-23 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 3e-23 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 3e-23 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 3e-23 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 4e-23 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 5e-23 | ||
| 3ekh_A | 449 | Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER | 6e-23 | ||
| 3ekh_A | 449 | Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER | 5e-07 | ||
| 2f2o_A | 179 | Structure Of Calmodulin Bound To A Calcineurin Pept | 6e-23 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 6e-23 | ||
| 3u0k_A | 440 | Crystal Structure Of The Genetically Encoded Calciu | 6e-23 | ||
| 3u0k_A | 440 | Crystal Structure Of The Genetically Encoded Calciu | 2e-07 | ||
| 3sg6_A | 450 | Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L | 6e-23 | ||
| 3sg6_A | 450 | Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L | 5e-07 | ||
| 3ek8_A | 449 | Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L | 6e-23 | ||
| 3ek8_A | 449 | Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L | 5e-07 | ||
| 3evu_A | 449 | Crystal Structure Of Calcium Bound Dimeric Gcamp2, | 6e-23 | ||
| 3evu_A | 449 | Crystal Structure Of Calcium Bound Dimeric Gcamp2, | 5e-07 | ||
| 3o78_A | 415 | The Structure Of Ca2+ Sensor (Case-12) Length = 415 | 7e-23 | ||
| 3o78_A | 415 | The Structure Of Ca2+ Sensor (Case-12) Length = 415 | 6e-07 | ||
| 3o77_A | 415 | The Structure Of Ca2+ Sensor (Case-16) Length = 415 | 7e-23 | ||
| 3o77_A | 415 | The Structure Of Ca2+ Sensor (Case-16) Length = 415 | 6e-07 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 7e-23 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 7e-23 | ||
| 3sg5_A | 448 | Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke | 7e-23 | ||
| 3sg5_A | 448 | Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke | 1e-07 | ||
| 3evr_A | 411 | Crystal Structure Of Calcium Bound Monomeric Gcamp2 | 7e-23 | ||
| 3evr_A | 411 | Crystal Structure Of Calcium Bound Monomeric Gcamp2 | 5e-07 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 7e-23 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 8e-23 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 8e-23 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 8e-23 | ||
| 3sg2_A | 449 | Crystal Structure Of Gcamp2-T116v,D381y Length = 44 | 8e-23 | ||
| 3sg2_A | 449 | Crystal Structure Of Gcamp2-T116v,D381y Length = 44 | 5e-07 | ||
| 3sg4_A | 448 | Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len | 8e-23 | ||
| 3sg4_A | 448 | Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len | 2e-07 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 8e-23 | ||
| 4djc_A | 152 | 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA | 9e-23 | ||
| 4djc_A | 152 | 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA | 1e-06 | ||
| 3sg7_A | 448 | Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4 | 9e-23 | ||
| 3sg7_A | 448 | Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4 | 2e-07 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 9e-23 | ||
| 2wel_D | 150 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 9e-23 | ||
| 2wel_D | 150 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 1e-06 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 9e-23 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-22 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 1e-22 | ||
| 2be6_A | 150 | 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC | 1e-22 | ||
| 2be6_A | 150 | 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC | 1e-06 | ||
| 1iq5_A | 149 | CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE | 1e-22 | ||
| 1iq5_A | 149 | CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE | 1e-06 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 1e-22 | ||
| 2ygg_B | 150 | Complex Of Cambr And Cam Length = 150 | 1e-22 | ||
| 2ygg_B | 150 | Complex Of Cambr And Cam Length = 150 | 1e-06 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-22 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 1e-22 | ||
| 3sg3_A | 449 | Crystal Structure Of Gcamp3-D380y Length = 449 | 1e-22 | ||
| 3sg3_A | 449 | Crystal Structure Of Gcamp3-D380y Length = 449 | 1e-07 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 1e-22 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 1e-22 | ||
| 1exr_A | 148 | The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca | 1e-22 | ||
| 1exr_A | 148 | The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca | 3e-06 | ||
| 1xfu_O | 149 | Crystal Structure Of Anthrax Edema Factor (ef) Trun | 2e-22 | ||
| 1xfu_O | 149 | Crystal Structure Of Anthrax Edema Factor (ef) Trun | 1e-06 | ||
| 3ewt_A | 154 | Crystal Structure Of Calmodulin Complexed With A Pe | 2e-22 | ||
| 3ewt_A | 154 | Crystal Structure Of Calmodulin Complexed With A Pe | 1e-06 | ||
| 1cm1_A | 148 | Motions Of Calmodulin-Single-Conformer Refinement L | 2e-22 | ||
| 1cm1_A | 148 | Motions Of Calmodulin-Single-Conformer Refinement L | 1e-06 | ||
| 1cdl_A | 147 | Target Enzyme Recognition By Calmodulin: 2.4 Angstr | 2e-22 | ||
| 1cdl_A | 147 | Target Enzyme Recognition By Calmodulin: 2.4 Angstr | 2e-06 | ||
| 2bkh_B | 149 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 2e-22 | ||
| 2bkh_B | 149 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-06 | ||
| 1prw_A | 149 | Crystal Structure Of Bovine Brain Ca++ Calmodulin I | 2e-22 | ||
| 1prw_A | 149 | Crystal Structure Of Bovine Brain Ca++ Calmodulin I | 2e-06 | ||
| 1up5_B | 148 | Chicken Calmodulin Length = 148 | 2e-22 | ||
| 1up5_B | 148 | Chicken Calmodulin Length = 148 | 2e-06 | ||
| 1ooj_A | 149 | Structural Genomics Of Caenorhabditis Elegans : Cal | 2e-22 | ||
| 1ooj_A | 149 | Structural Genomics Of Caenorhabditis Elegans : Cal | 1e-06 | ||
| 2k0j_A | 148 | Solution Structure Of Cam Complexed To Drp1p Length | 2e-22 | ||
| 2k0j_A | 148 | Solution Structure Of Cam Complexed To Drp1p Length | 4e-07 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 2e-22 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 3e-22 | ||
| 2vb6_B | 149 | Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo | 3e-22 | ||
| 2vb6_B | 149 | Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo | 1e-06 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 3e-22 | ||
| 1clm_A | 148 | Structure Of Paramecium Tetraurelia Calmodulin At 1 | 3e-22 | ||
| 1clm_A | 148 | Structure Of Paramecium Tetraurelia Calmodulin At 1 | 3e-06 | ||
| 2bbm_A | 148 | Solution Structure Of A Calmodulin-Target Peptide C | 3e-22 | ||
| 2bbm_A | 148 | Solution Structure Of A Calmodulin-Target Peptide C | 1e-06 | ||
| 1ahr_A | 146 | Calmodulin Mutant With A Two Residue Deletion In Th | 3e-22 | ||
| 1ahr_A | 146 | Calmodulin Mutant With A Two Residue Deletion In Th | 1e-06 | ||
| 2lv6_A | 148 | The Complex Between Ca-calmodulin And Skeletal Musc | 3e-22 | ||
| 2lv6_A | 148 | The Complex Between Ca-calmodulin And Skeletal Musc | 1e-06 | ||
| 1dmo_A | 148 | Calmodulin, Nmr, 30 Structures Length = 148 | 4e-22 | ||
| 1dmo_A | 148 | Calmodulin, Nmr, 30 Structures Length = 148 | 1e-06 | ||
| 2vay_A | 146 | Calmodulin Complexed With Cav1.1 Iq Peptide Length | 5e-22 | ||
| 2vay_A | 146 | Calmodulin Complexed With Cav1.1 Iq Peptide Length | 1e-06 | ||
| 4gow_D | 144 | Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX | 5e-22 | ||
| 4gow_D | 144 | Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX | 1e-06 | ||
| 1cdm_A | 144 | Modulation Of Calmodulin Plasticity In Molecular Re | 6e-22 | ||
| 1cdm_A | 144 | Modulation Of Calmodulin Plasticity In Molecular Re | 1e-06 | ||
| 2ix7_A | 145 | Structure Of Apo-Calmodulin Bound To Unconventional | 6e-22 | ||
| 2ix7_A | 145 | Structure Of Apo-Calmodulin Bound To Unconventional | 2e-06 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 6e-22 | ||
| 2lhi_A | 176 | Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L | 8e-22 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 2e-21 | ||
| 1k93_D | 144 | Crystal Structure Of The Adenylyl Cyclase Domain Of | 2e-21 | ||
| 1k93_D | 144 | Crystal Structure Of The Adenylyl Cyclase Domain Of | 1e-06 | ||
| 1y0v_H | 146 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 2e-21 | ||
| 1y0v_H | 146 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 1e-06 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 2e-21 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 3e-21 | ||
| 1qtx_A | 148 | The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept | 3e-21 | ||
| 1qtx_A | 148 | The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept | 6e-06 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 3e-21 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 3e-21 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 3e-21 | ||
| 1vrk_A | 148 | The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 | 3e-21 | ||
| 1vrk_A | 148 | The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 | 6e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 3e-21 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 4e-21 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 4e-21 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 5e-21 | ||
| 1deg_A | 142 | The Linker Of Des-Glu84 Calmodulin Is Bent As Seen | 8e-21 | ||
| 1deg_A | 142 | The Linker Of Des-Glu84 Calmodulin Is Bent As Seen | 8e-07 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 9e-21 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 1e-20 | ||
| 1qs7_A | 145 | The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti | 1e-20 | ||
| 1qs7_A | 145 | The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti | 6e-06 | ||
| 1rfj_A | 149 | Crystal Structure Of Potato Calmodulin Pcm6 Length | 2e-20 | ||
| 1rfj_A | 149 | Crystal Structure Of Potato Calmodulin Pcm6 Length | 1e-05 | ||
| 3khe_A | 191 | Crystal Structure Of The Calcium-Loaded Calmodulin- | 3e-20 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 3e-20 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 3e-20 | ||
| 3qrx_A | 169 | Chlamydomonas Reinhardtii Centrin Bound To Melittin | 4e-20 | ||
| 1niw_A | 148 | Crystal Structure Of Endothelial Nitric Oxide Synth | 4e-20 | ||
| 1xfx_O | 149 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 6e-20 | ||
| 2l1w_A | 149 | The Solution Structure Of Soybean Calmodulin Isofor | 6e-20 | ||
| 2l1w_A | 149 | The Solution Structure Of Soybean Calmodulin Isofor | 1e-06 | ||
| 4aqr_A | 149 | Crystal Structure Of A Calmodulin In Complex With T | 8e-20 | ||
| 4aqr_A | 149 | Crystal Structure Of A Calmodulin In Complex With T | 1e-05 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 9e-20 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-19 | ||
| 3k21_A | 191 | Crystal Structure Of Carboxy-Terminus Of Pfc0420w L | 1e-19 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 1e-19 | ||
| 1y6w_A | 148 | Trapped Intermediate Of Calmodulin Length = 148 | 1e-19 | ||
| 1ggz_A | 148 | Crystal Structure Of The Calmodulin-Like Protein (H | 1e-19 | ||
| 1ggz_A | 148 | Crystal Structure Of The Calmodulin-Like Protein (H | 1e-05 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 1e-19 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 1e-19 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 2e-19 | ||
| 3o4y_A | 196 | Crystal Structure Of Cad Domain Of The Plasmodium V | 3e-19 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 3e-19 | ||
| 3ekj_A | 449 | Calcium-Free Gcamp2 (Calcium Binding Deficient Muta | 3e-19 | ||
| 3ekj_A | 449 | Calcium-Free Gcamp2 (Calcium Binding Deficient Muta | 2e-05 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 3e-19 | ||
| 1lkj_A | 146 | Nmr Structure Of Apo Calmodulin From Yeast Saccharo | 3e-19 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 4e-19 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 4e-19 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 4e-19 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 4e-19 | ||
| 4ds7_A | 147 | Crystal Structure Of Yeast Calmodulin Bound To The | 4e-19 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 4e-19 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 6e-19 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 6e-19 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 6e-19 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 6e-19 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 7e-19 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 7e-19 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 8e-19 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 9e-19 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 9e-19 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 1e-18 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 1e-18 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 1e-18 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 1e-18 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 1e-18 | ||
| 3kf9_A | 149 | Crystal Structure Of The SdcenSKMLCK COMPLEX Length | 2e-18 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 2e-18 | ||
| 1a2x_A | 159 | Complex Of Troponin C With A 47 Residue (1-47) Frag | 2e-18 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 2e-18 | ||
| 1tcf_A | 159 | Crystal Structure Of Calcium-Saturated Rabbit Skele | 3e-18 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 3e-18 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 3e-18 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 3e-18 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 3e-18 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 4e-18 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 4e-18 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 4e-18 | ||
| 1ytz_C | 162 | Crystal Structure Of Skeletal Muscle Troponin In Th | 5e-18 | ||
| 2w49_0 | 159 | Isometrically Contracting Insect Asynchronous Fligh | 5e-18 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 5e-18 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 6e-18 | ||
| 4tnc_A | 162 | Refined Structure Of Chicken Skeletal Muscle Tropon | 6e-18 | ||
| 3l19_A | 214 | Crystal Structure Of Calcium Binding Domain Of Cpcd | 6e-18 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 9e-18 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 9e-18 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 9e-18 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 1e-17 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 1e-17 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 1e-17 | ||
| 5tnc_A | 162 | Refined Crystal Structure Of Troponin C From Turkey | 1e-17 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 2e-17 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 2e-17 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 2e-17 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 2e-17 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 2e-17 | ||
| 1tnw_A | 162 | Nmr Solution Structure Of Calcium Saturated Skeleta | 2e-17 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 3e-17 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 4e-17 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 5e-17 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 6e-17 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 6e-17 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 7e-17 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 7e-17 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 1e-16 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-16 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 1e-16 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 1e-16 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 2e-16 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-16 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 2e-16 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 2e-16 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 3e-16 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 3e-16 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-16 | ||
| 2lmt_A | 148 | Nmr Structure Of Androcam Length = 148 | 4e-16 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 4e-16 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-16 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 4e-16 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 4e-16 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 5e-16 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 5e-16 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 6e-16 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 7e-16 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 8e-16 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 9e-16 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 1e-15 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 1e-15 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 1e-15 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-15 | ||
| 2obh_A | 143 | Centrin-Xpc Peptide Length = 143 | 1e-15 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 2e-15 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 2e-15 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 2e-15 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 2e-15 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 3e-15 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 3e-15 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 3e-15 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 3e-15 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 3e-15 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 3e-15 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 3e-15 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 3e-15 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 3e-15 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 3e-15 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 3e-15 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 3e-15 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 4e-15 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 4e-15 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 4e-15 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 4e-15 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 4e-15 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 4e-15 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 4e-15 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 4e-15 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 4e-15 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 5e-15 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 5e-15 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 5e-15 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 5e-15 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 5e-15 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 5e-15 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 5e-15 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 5e-15 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 5e-15 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 6e-15 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 6e-15 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 6e-15 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 6e-15 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 6e-15 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 6e-15 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 6e-15 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 8e-15 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 8e-15 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 8e-15 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 8e-15 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 8e-15 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 8e-15 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 8e-15 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 9e-15 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 1e-14 | ||
| 2lhh_A | 128 | Solution Structure Of Ca2+-Bound Ycam Length = 128 | 1e-14 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 1e-14 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 1e-14 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 1e-14 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 1e-14 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 1e-14 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 1e-14 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 2e-14 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 2e-14 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 2e-14 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 3e-14 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 3e-14 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 3e-14 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 3e-14 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 3e-14 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 3e-14 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 3e-14 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 3e-14 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 3e-14 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 3e-14 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 3e-14 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 4e-14 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 4e-14 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 4e-14 | ||
| 1dtl_A | 161 | Crystal Structure Of Calcium-Saturated (3ca2+) Card | 5e-14 | ||
| 2jt0_A | 161 | Solution Structure Of F104w Cardiac Troponin C Leng | 5e-14 | ||
| 2jt3_A | 161 | Solution Structure Of F153w Cardiac Troponin C Leng | 5e-14 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 6e-14 | ||
| 1aj4_A | 161 | Structure Of Calcium-Saturated Cardiac Troponin C, | 6e-14 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 6e-14 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 7e-14 | ||
| 1la0_A | 161 | Solution Structure Of Calcium Saturated Cardiac Tro | 7e-14 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 7e-14 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 7e-14 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 7e-14 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 8e-14 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 1e-13 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 1e-13 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 1e-13 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 1e-13 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 1e-13 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 1e-13 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-13 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 1e-13 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 1e-13 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 1e-13 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 1e-13 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 1e-13 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-13 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 1e-13 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-13 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 2e-13 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 2e-13 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-13 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-13 | ||
| 2jtz_A | 161 | Solution Structure And Chemical Shift Assignments O | 2e-13 | ||
| 2jt8_A | 161 | Solution Structure Of The F153-To-5-Flurotryptophan | 2e-13 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 2e-13 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 2e-13 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 2e-13 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 2e-13 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 2e-13 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 2e-13 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 2e-13 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 2e-13 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 2e-13 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-13 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 3e-13 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 3e-13 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 3e-13 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 3e-13 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 3e-13 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-13 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 3e-13 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 3e-13 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 3e-13 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 3e-13 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 3e-13 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 3e-13 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-13 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 3e-13 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 3e-13 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 3e-13 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 3e-13 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-13 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 3e-13 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 3e-13 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 3e-13 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 3e-13 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 3e-13 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 3e-13 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 3e-13 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 3e-13 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 4e-13 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 4e-13 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 4e-13 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 4e-13 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 4e-13 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 4e-13 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 4e-13 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-13 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 4e-13 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 4e-13 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 4e-13 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 4e-13 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 4e-13 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 4e-13 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 4e-13 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 4e-13 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 5e-13 | ||
| 4f99_A | 361 | Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti | 5e-13 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 5e-13 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 6e-13 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 6e-13 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 6e-13 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 6e-13 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 7e-13 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 7e-13 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 7e-13 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 7e-13 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 7e-13 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 7e-13 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 7e-13 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 7e-13 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 7e-13 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 8e-13 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 8e-13 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 9e-13 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 9e-13 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 9e-13 | ||
| 2lan_A | 167 | Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc | 9e-13 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 1e-12 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 1e-12 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 1e-12 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 1e-12 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 1e-12 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 1e-12 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 1e-12 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 1e-12 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 1e-12 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 1e-12 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 1e-12 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 1e-12 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 1e-12 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 1e-12 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 1e-12 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 2e-12 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 2e-12 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 2e-12 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 2e-12 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 2e-12 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 2e-12 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 2e-12 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 2e-12 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 2e-12 | ||
| 3ox5_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 2e-12 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 2e-12 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 3e-12 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 3e-12 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-12 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 3e-12 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 3e-12 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 4e-12 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 4e-12 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 4e-12 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 4e-12 | ||
| 3ox6_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 4e-12 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 4e-12 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 4e-12 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 4e-12 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 4e-12 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 5e-12 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 5e-12 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 6e-12 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 6e-12 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 6e-12 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 6e-12 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 6e-12 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 6e-12 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 6e-12 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 6e-12 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 7e-12 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 7e-12 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 7e-12 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 8e-12 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 8e-12 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 8e-12 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 8e-12 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 8e-12 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 9e-12 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 9e-12 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 1e-11 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-11 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 1e-11 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 1e-11 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-11 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 1e-11 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 1e-11 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 1e-11 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 1e-11 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 1e-11 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 1e-11 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 1e-11 | ||
| 2ggm_A | 172 | Human Centrin 2 Xeroderma Pigmentosum Group C Prote | 1e-11 | ||
| 1tco_B | 169 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 1e-11 | ||
| 1mf8_B | 170 | Crystal Structure Of Human Calcineurin Complexed Wi | 1e-11 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 2e-11 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 2e-11 | ||
| 2p6b_B | 156 | Crystal Structure Of Human Calcineurin In Complex W | 2e-11 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 2e-11 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 2e-11 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-11 | ||
| 3ll8_B | 155 | Crystal Structure Of Calcineurin In Complex With Ak | 2e-11 | ||
| 3fwb_A | 161 | Sac3:sus1:cdc31 Complex Length = 161 | 2e-11 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 2e-11 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 2e-11 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 2e-11 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-11 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-11 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-11 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 3e-11 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 4e-11 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 5e-11 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 5e-11 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 5e-11 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-11 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 7e-11 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 1e-10 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 1e-10 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 1e-10 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 1e-10 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 2e-10 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-10 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 2e-10 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 2e-10 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 2e-10 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 2e-10 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 2e-10 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 2e-10 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 2e-10 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-10 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 2e-10 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-10 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-10 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-10 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 2e-10 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-10 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-10 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 2e-10 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-10 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-10 | ||
| 2gv5_A | 161 | Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 1 | 2e-10 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 3e-10 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-10 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 3e-10 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 3e-10 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 3e-10 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-10 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 4e-10 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 4e-10 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 4e-10 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 4e-10 | ||
| 2jnf_A | 158 | Solution Structure Of Fly Troponin C, Isoform F1 Le | 4e-10 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 4e-10 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 4e-10 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-10 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 5e-10 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 5e-10 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 5e-10 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 5e-10 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-10 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-10 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 5e-10 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 6e-10 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 6e-10 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 6e-10 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 6e-10 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 6e-10 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-10 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 6e-10 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 6e-10 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 6e-10 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 6e-10 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 6e-10 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 6e-10 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 6e-10 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 6e-10 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 6e-10 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 6e-10 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 7e-10 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 7e-10 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 7e-10 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-10 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-10 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 7e-10 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 7e-10 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 7e-10 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 7e-10 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 7e-10 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-10 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 8e-10 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 8e-10 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 8e-10 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 8e-10 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 9e-10 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 9e-10 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 9e-10 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 1e-09 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-09 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 1e-09 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-09 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-09 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-09 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 1e-09 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 1e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-09 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-09 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-09 | ||
| 3e3r_A | 204 | Crystal Structure And Biochemical Characterization | 1e-09 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 1e-09 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-09 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-09 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-09 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 1e-09 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-09 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 2e-09 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 2e-09 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 2e-09 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 2e-09 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-09 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 2e-09 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-09 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-09 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 2e-09 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 2e-09 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-09 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 2e-09 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 2e-09 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 2e-09 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-09 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-09 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 3e-09 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 3e-09 | ||
| 1q8y_A | 373 | The Structure Of The Yeast Sr Protein Kinase, Sky1p | 3e-09 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-09 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 3e-09 | ||
| 1how_A | 373 | The X-Ray Crystal Structure Of Sky1p, An Sr Protein | 3e-09 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 3e-09 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 3e-09 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 3e-09 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 3e-09 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 3e-09 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-09 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 3e-09 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 3e-09 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 3e-09 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 3e-09 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 4e-09 | ||
| 3uys_A | 296 | Crystal Structure Of Apo Human Ck1d Length = 296 | 4e-09 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 4e-09 | ||
| 1z57_A | 339 | Crystal Structure Of Human Clk1 In Complex With 10z | 4e-09 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 4e-09 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 4e-09 | ||
| 1ckj_A | 317 | Casein Kinase I Delta Truncation Mutant Containing | 4e-09 | ||
| 2bl0_C | 142 | Physarum Polycephalum Myosin Ii Regulatory Domain L | 4e-09 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 5e-09 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-09 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 5e-09 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 5e-09 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-09 | ||
| 3nr9_A | 368 | Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length | 6e-09 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 7e-09 | ||
| 2bl0_B | 145 | Physarum Polycephalum Myosin Ii Regulatory Domain L | 7e-09 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 7e-09 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 7e-09 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 7e-09 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 7e-09 | ||
| 3ifk_A | 90 | Crystal Structure Of Calcium-Saturated Calmodulin N | 7e-09 | ||
| 3ifk_A | 90 | Crystal Structure Of Calcium-Saturated Calmodulin N | 7e-07 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 7e-09 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 7e-09 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 8e-09 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 8e-09 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 8e-09 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 8e-09 | ||
| 3llt_A | 360 | Crystal Structure Of Pf14_0431, Kinase Domain Lengt | 8e-09 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 9e-09 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 9e-09 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-08 | ||
| 2vag_A | 339 | Crystal Structure Of Di-Phosphorylated Human Clk1 I | 1e-08 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-08 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 1e-08 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 1e-08 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 1e-08 | ||
| 1f54_A | 77 | Solution Structure Of The Apo N-Terminal Domain Of | 1e-08 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 1e-08 | ||
| 1yru_B | 74 | Crystal Structure Analysis Of The Adenylyl Cyclaes | 1e-08 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 2e-08 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-08 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 2e-08 | ||
| 1cmf_A | 73 | Nmr Solution Structure Of Apo Calmodulin Carboxy-Te | 2e-08 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-08 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 2e-08 | ||
| 1f71_A | 67 | Refined Solution Structure Of Calmodulin C-Terminal | 2e-08 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 2e-08 | ||
| 1fw4_A | 71 | Crystal Structure Of E. Coli Fragment Tr2c From Cal | 2e-08 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 2e-08 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-08 | ||
| 1zot_B | 69 | Crystal Structure Analysis Of The CyaaC-Cam With Pm | 2e-08 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 2e-08 | ||
| 2col_B | 67 | Crystal Structure Analysis Of CyaaC-Cam With Pyroph | 2e-08 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-08 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-08 | ||
| 1f70_A | 76 | Refined Solution Structure Of Calmodulin N-Terminal | 2e-08 | ||
| 1f70_A | 76 | Refined Solution Structure Of Calmodulin N-Terminal | 5e-07 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 2e-08 | ||
| 2lqc_A | 77 | Nmr Solution Structure Of A Ca2+-Calmodulin With A | 2e-08 | ||
| 2lqc_A | 77 | Nmr Solution Structure Of A Ca2+-Calmodulin With A | 5e-07 | ||
| 3b32_A | 75 | Crystal Structure Of Calcium-Saturated Calmodulin N | 2e-08 | ||
| 3b32_A | 75 | Crystal Structure Of Calcium-Saturated Calmodulin N | 5e-07 | ||
| 1ak8_A | 76 | Nmr Solution Structure Of Cerium-Loaded Calmodulin | 2e-08 | ||
| 1ak8_A | 76 | Nmr Solution Structure Of Cerium-Loaded Calmodulin | 5e-07 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 2e-08 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 2e-08 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 2e-08 | ||
| 3anq_A | 368 | Human Dyrk1aINHIBITOR COMPLEX Length = 368 | 3e-08 | ||
| 3mse_B | 180 | Crystal Structure Of C-Terminal Domain Of Pf110239 | 3e-08 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 3e-08 | ||
| 3uct_A | 79 | Structure Of Mn2+-Bound N-Terminal Domain Of Calmod | 3e-08 | ||
| 3uct_A | 79 | Structure Of Mn2+-Bound N-Terminal Domain Of Calmod | 5e-07 | ||
| 2vx3_A | 382 | Crystal Structure Of The Human Dual Specificity Tyr | 3e-08 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 3e-08 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 3e-08 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 3e-08 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 3e-08 | ||
| 2llo_A | 80 | Solution Nmr-Derived Structure Of Calmodulin N-Lobe | 3e-08 | ||
| 2llo_A | 80 | Solution Nmr-Derived Structure Of Calmodulin N-Lobe | 7e-07 | ||
| 3aaj_A | 167 | Crystal Structure Of Ca2+-Bound Form Of Des3-23alg- | 3e-08 | ||
| 2kn2_A | 92 | Solution Structure Of The C-Terminal Domain Of Soyb | 4e-08 | ||
| 4aze_A | 382 | Human Dyrk1a In Complex With Leucettine L41 Length | 4e-08 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 4e-08 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 4e-08 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 4e-08 | ||
| 1sw8_A | 79 | Solution Structure Of The N-Terminal Domain Of Huma | 4e-08 | ||
| 1sw8_A | 79 | Solution Structure Of The N-Terminal Domain Of Huma | 2e-07 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 4e-08 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 4e-08 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 5e-08 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 5e-08 | ||
| 4hni_A | 296 | Crystal Structure Of Ck1e In Complex With Pf4800567 | 5e-08 | ||
| 2b1u_A | 71 | Solution Structure Of Calmodulin-Like Skin Protein | 5e-08 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 5e-08 | ||
| 2kxw_A | 73 | Structure Of The C-Domain Fragment Of Apo Calmoduli | 5e-08 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 5e-08 |
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188 | Back alignment and structure |
|
| >pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440 | Back alignment and structure |
|
| >pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440 | Back alignment and structure |
|
| >pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450 | Back alignment and structure |
|
| >pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450 | Back alignment and structure |
|
| >pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449 | Back alignment and structure |
|
| >pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449 | Back alignment and structure |
|
| >pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415 | Back alignment and structure |
|
| >pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415 | Back alignment and structure |
|
| >pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415 | Back alignment and structure |
|
| >pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411 | Back alignment and structure |
|
| >pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449 | Back alignment and structure |
|
| >pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449 | Back alignment and structure |
|
| >pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152 | Back alignment and structure |
|
| >pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152 | Back alignment and structure |
|
| >pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448 | Back alignment and structure |
|
| >pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150 | Back alignment and structure |
|
| >pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150 | Back alignment and structure |
|
| >pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150 | Back alignment and structure |
|
| >pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149 | Back alignment and structure |
|
| >pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150 | Back alignment and structure |
|
| >pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449 | Back alignment and structure |
|
| >pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154 | Back alignment and structure |
|
| >pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154 | Back alignment and structure |
|
| >pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148 | Back alignment and structure |
|
| >pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148 | Back alignment and structure |
|
| >pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147 | Back alignment and structure |
|
| >pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147 | Back alignment and structure |
|
| >pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149 | Back alignment and structure |
|
| >pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149 | Back alignment and structure |
|
| >pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149 | Back alignment and structure |
|
| >pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149 | Back alignment and structure |
|
| >pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148 | Back alignment and structure |
|
| >pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149 | Back alignment and structure |
|
| >pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148 | Back alignment and structure |
|
| >pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148 | Back alignment and structure |
|
| >pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148 | Back alignment and structure |
|
| >pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148 | Back alignment and structure |
|
| >pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146 | Back alignment and structure |
|
| >pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146 | Back alignment and structure |
|
| >pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148 | Back alignment and structure |
|
| >pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148 | Back alignment and structure |
|
| >pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148 | Back alignment and structure |
|
| >pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148 | Back alignment and structure |
|
| >pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146 | Back alignment and structure |
|
| >pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146 | Back alignment and structure |
|
| >pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144 | Back alignment and structure |
|
| >pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144 | Back alignment and structure |
|
| >pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144 | Back alignment and structure |
|
| >pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144 | Back alignment and structure |
|
| >pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145 | Back alignment and structure |
|
| >pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144 | Back alignment and structure |
|
| >pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144 | Back alignment and structure |
|
| >pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146 | Back alignment and structure |
|
| >pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142 | Back alignment and structure |
|
| >pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145 | Back alignment and structure |
|
| >pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145 | Back alignment and structure |
|
| >pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149 | Back alignment and structure |
|
| >pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149 | Back alignment and structure |
|
| >pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii Length = 191 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169 | Back alignment and structure |
|
| >pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149 | Back alignment and structure |
|
| >pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149 | Back alignment and structure |
|
| >pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149 | Back alignment and structure |
|
| >pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149 | Back alignment and structure |
|
| >pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148 | Back alignment and structure |
|
| >pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant) Length = 449 | Back alignment and structure |
|
| >pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant) Length = 449 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162 | Back alignment and structure |
|
| >pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2LMT|A Chain A, Nmr Structure Of Androcam Length = 148 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2OBH|A Chain A, Centrin-Xpc Peptide Length = 143 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac Troponin C Complexed With The Calcium Sensitizer Bepridil At 2.15 A Resolution Length = 161 | Back alignment and structure |
|
| >pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1 Structure Length = 161 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C In The Troponin C-Troponin I Complex Length = 161 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant Of Human Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc Length = 167 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein Complex Length = 172 | Back alignment and structure |
|
| >pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169 | Back alignment and structure |
|
| >pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155 | Back alignment and structure |
|
| >pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex Length = 161 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 161 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1 Length = 158 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of Recombinant Human Calcyphosine Delineates A Novel Ef-hand-containing Protein Family Length = 204 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317 | Back alignment and structure |
|
| >pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain Length = 142 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain Length = 145 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-90 Length = 90 | Back alignment and structure |
|
| >pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-90 Length = 90 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast Calmodulin Length = 77 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella Pertussis In Presence Of C-Terminal Calmodulin And 1mm Calcium Chloride Length = 74 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal Domain Length = 73 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain Length = 67 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin To 1.7 A Resolution Length = 71 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp Length = 69 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate Length = 67 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding Motif (Nscate) Peptide From The N-Terminal Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium Channel Alpha1c Subunit Length = 77 | Back alignment and structure |
|
| >pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding Motif (Nscate) Peptide From The N-Terminal Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium Channel Alpha1c Subunit Length = 77 | Back alignment and structure |
|
| >pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75 Length = 75 | Back alignment and structure |
|
| >pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75 Length = 75 | Back alignment and structure |
|
| >pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino- Terminal Domain (Ce2-Tr1c), 23 Structures Length = 76 | Back alignment and structure |
|
| >pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino- Terminal Domain (Ce2-Tr1c), 23 Structures Length = 76 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368 | Back alignment and structure |
|
| >pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239 Length = 180 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In The Presence Of Zn2+ Length = 79 | Back alignment and structure |
|
| >pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In The Presence Of Zn2+ Length = 79 | Back alignment and structure |
|
| >pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound With Er Alpha Peptide Length = 80 | Back alignment and structure |
|
| >pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound With Er Alpha Peptide Length = 80 | Back alignment and structure |
|
| >pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2deltagf122 Length = 167 | Back alignment and structure |
|
| >pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean Calmodulin Isoform 4 Fused With The Calmodulin-Binding Domain Of Ntmkp1 Length = 92 | Back alignment and structure |
|
| >pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d Calmodulin Refined With Paramagnetism Based Strategy Length = 79 | Back alignment and structure |
|
| >pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d Calmodulin Refined With Paramagnetism Based Strategy Length = 79 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296 | Back alignment and structure |
|
| >pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C Terminal Domain Length = 71 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound To The Iq Motif Of Nav1.2 Length = 73 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 564 | |||
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 0.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 0.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 0.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 0.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 0.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 0.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 0.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 0.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 0.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 0.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 0.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 0.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 0.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 1e-180 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 1e-179 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 1e-179 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 1e-179 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 1e-179 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 1e-176 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 1e-175 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 1e-174 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 1e-174 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 1e-173 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 1e-173 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 1e-172 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 1e-170 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 1e-169 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 1e-169 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 1e-168 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 1e-164 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 1e-156 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 1e-152 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 1e-151 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 1e-109 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 1e-106 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 1e-101 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 3e-99 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 9e-95 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 3e-92 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 4e-91 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 1e-90 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 7e-90 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 8e-88 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 3e-86 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 4e-86 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 2e-85 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 3e-85 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 1e-84 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 2e-83 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 7e-83 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 3e-82 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 9e-82 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 4e-81 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 9e-81 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 1e-80 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 1e-21 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 1e-80 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 2e-80 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 3e-80 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 5e-80 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 5e-80 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 7e-80 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 2e-79 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 2e-79 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 4e-79 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 6e-79 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 7e-79 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 2e-78 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 3e-78 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 5e-77 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 1e-74 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 9e-13 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 1e-07 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 4e-73 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 1e-72 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 2e-72 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 2e-70 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 4e-68 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 5e-67 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 2e-66 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 1e-65 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 5e-65 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 5e-65 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 4e-14 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 9e-65 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 3e-27 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 1e-64 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 2e-64 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 5e-16 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 4e-64 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 7e-16 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 5e-64 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 1e-63 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 1e-14 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 3e-63 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 9e-63 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 1e-13 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 1e-62 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 3e-62 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 2e-16 | |
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 5e-61 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 6e-61 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 8e-61 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 2e-60 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 2e-60 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 1e-15 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 1e-59 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 1e-15 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 1e-57 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 5e-56 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 5e-56 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 7e-55 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 2e-53 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 5e-14 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 4e-12 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 9e-05 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 3e-53 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 7e-53 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 8e-53 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 1e-52 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 1e-04 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 4e-52 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 2e-51 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 4e-15 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 3e-14 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 4e-10 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 2e-51 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 1e-50 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 2e-50 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 2e-50 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 7e-05 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 4e-50 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 3e-49 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 6e-23 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 3e-49 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 3e-48 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 5e-24 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 2e-15 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 1e-14 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 7e-48 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 1e-47 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 2e-47 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 2e-19 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 3e-47 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 3e-15 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 3e-47 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 4e-47 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 4e-47 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 8e-10 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 4e-47 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 1e-46 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 1e-46 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 2e-14 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 2e-13 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 2e-13 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 8e-06 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 4e-46 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 4e-46 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 5e-46 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 2e-45 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 2e-45 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 3e-16 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 9e-15 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 4e-04 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 2e-45 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 2e-45 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 2e-45 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 2e-45 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 7e-45 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 1e-44 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 3e-14 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 2e-44 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 3e-44 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 8e-16 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 2e-13 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 3e-44 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 1e-15 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 3e-44 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 3e-44 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 1e-43 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 3e-35 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 3e-13 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 1e-43 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 2e-43 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 6e-15 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 3e-43 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 4e-42 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 4e-42 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 3e-32 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 6e-42 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 2e-41 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 2e-12 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 3e-41 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 4e-41 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 4e-41 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 2e-18 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 1e-40 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 2e-40 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 8e-16 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 5e-40 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 8e-40 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 9e-40 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 1e-39 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 2e-39 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 1e-20 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 2e-05 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 2e-39 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 2e-39 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 3e-39 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 2e-10 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 3e-39 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 2e-14 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 5e-14 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 5e-39 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 8e-39 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 2e-38 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 5e-38 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 6e-38 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 4e-25 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 8e-38 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 1e-37 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 1e-37 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 2e-16 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 1e-37 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 3e-37 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 3e-37 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 5e-37 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 8e-15 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 5e-37 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 6e-37 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 3e-13 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 7e-11 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 1e-36 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 1e-36 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 1e-36 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 2e-14 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 1e-36 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 1e-36 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 3e-36 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 7e-13 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 4e-36 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 5e-36 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 2e-12 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 6e-36 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 2e-35 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 4e-12 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 3e-35 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 3e-35 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 3e-35 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 4e-35 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 7e-35 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 4e-12 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 9e-35 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 2e-34 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 1e-22 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 5e-08 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 3e-34 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 4e-34 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 5e-34 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 7e-34 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 1e-33 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 2e-33 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 3e-33 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 3e-33 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 6e-33 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 1e-32 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 1e-17 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 9e-08 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 1e-32 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 2e-28 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 2e-32 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 2e-12 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 3e-11 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 4e-08 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 2e-32 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 2e-32 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 4e-13 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 4e-04 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 3e-32 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 6e-32 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 1e-17 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 8e-32 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 3e-12 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 5e-12 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 1e-31 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 2e-31 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 4e-31 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 5e-31 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 8e-31 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 4e-30 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 1e-30 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 2e-30 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 2e-30 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 3e-30 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 3e-30 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 3e-30 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 3e-30 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 3e-18 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 4e-30 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 3e-18 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 4e-30 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 4e-30 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 6e-30 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 1e-29 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 2e-29 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 2e-29 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 2e-29 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 1e-28 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 8e-29 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 9e-28 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 3e-17 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 8e-09 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 1e-27 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 2e-16 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 4e-09 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 2e-27 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 3e-27 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 3e-27 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 6e-27 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 8e-27 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 1e-16 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 2e-26 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 3e-18 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 2e-26 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 3e-26 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 5e-09 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 6e-26 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 3e-25 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 6e-26 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 7e-08 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 8e-26 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 8e-09 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 9e-26 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 1e-25 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 2e-25 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 2e-25 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 1e-08 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 2e-25 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 1e-21 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 5e-25 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 6e-25 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 7e-25 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 3e-24 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 7e-24 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 7e-22 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 9e-24 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 4e-15 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 7e-15 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 2e-06 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 4e-06 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 1e-23 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 1e-23 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 1e-04 | |
| 2d58_A | 107 | Allograft inflammatory factor 1; EF-hand, metal bi | 1e-23 | |
| 2d58_A | 107 | Allograft inflammatory factor 1; EF-hand, metal bi | 3e-21 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 2e-23 | |
| 1yx7_A | 83 | Calsensin, LAN3-6 antigen; calcium-binding protein | 2e-23 | |
| 1yx7_A | 83 | Calsensin, LAN3-6 antigen; calcium-binding protein | 2e-14 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 2e-23 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 3e-23 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 2e-17 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 7e-23 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 1e-21 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 6e-21 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 1e-21 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 2e-21 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 4e-21 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 7e-21 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 8e-21 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 6e-19 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 8e-21 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 4e-06 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 1e-20 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 3e-20 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 3e-20 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 4e-20 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 4e-20 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 6e-20 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 6e-20 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 3e-19 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 6e-20 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 8e-20 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 8e-20 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 9e-20 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 1e-19 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 1e-19 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 2e-19 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 2e-19 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 3e-19 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 4e-19 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 4e-19 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 4e-19 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 5e-19 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 5e-19 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 5e-19 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 6e-19 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 6e-19 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 7e-19 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 9e-19 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 1e-18 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 1e-18 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 1e-18 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 2e-18 | |
| 1qx2_A | 76 | Vitamin D-dependent calcium-binding protein, INTE; | 2e-18 | |
| 1qx2_A | 76 | Vitamin D-dependent calcium-binding protein, INTE; | 1e-11 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 2e-18 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 9e-05 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 2e-18 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 3e-18 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 3e-18 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 3e-18 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 4e-18 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 4e-17 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 4e-18 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 5e-18 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 6e-18 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 6e-18 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 6e-18 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 6e-18 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 7e-18 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 9e-18 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 1e-17 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 1e-17 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 1e-17 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 2e-17 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 2e-17 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 3e-17 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 3e-17 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 7e-17 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 1e-16 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 1e-16 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 2e-16 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 3e-16 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 4e-16 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 6e-16 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 8e-16 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 2e-14 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 8e-10 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 5e-14 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 2e-10 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 7e-14 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 1e-11 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 2e-13 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 3e-13 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 7e-11 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 3e-13 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 4e-13 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 8e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 3fia_A | 121 | Intersectin-1; EH 1 domain, NESG, structural genom | 6e-11 | |
| 3fia_A | 121 | Intersectin-1; EH 1 domain, NESG, structural genom | 1e-06 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 9e-11 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 1e-10 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 6e-05 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 1e-10 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 2e-08 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 3e-10 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 2e-04 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 6e-10 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 8e-10 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 2e-09 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 2e-08 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 4e-08 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 3e-09 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 5e-07 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 3e-09 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 4e-05 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 1e-08 | |
| 1cb1_A | 78 | Calbindin D9K; calcium-binding protein; NMR {Sus s | 2e-08 | |
| 1cb1_A | 78 | Calbindin D9K; calcium-binding protein; NMR {Sus s | 1e-05 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 5e-08 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 4e-07 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 1e-07 | |
| 1a4p_A | 96 | S100A10; S100 family, EF-hand protein, ligand of a | 9e-07 | |
| 1xk4_A | 93 | Calgranulin A; S100 family, heterotetramer, metal | 1e-06 | |
| 1xk4_A | 93 | Calgranulin A; S100 family, heterotetramer, metal | 6e-05 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 3e-06 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 9e-04 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 3e-06 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 7e-04 | |
| 1snl_A | 103 | Nucleobindin 1, calnuc; EF-hand, calcium-binding, | 5e-06 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 5e-06 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 4e-04 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 8e-06 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 1e-05 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 8e-05 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 2e-05 | |
| 2wcb_A | 95 | Protein S100-A12; calcium signalling, HOST-parasit | 2e-05 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 3e-05 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 4e-05 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 4e-05 | |
| 1k8u_A | 90 | S100A6, calcyclin, CACY; calcium regulatory protei | 7e-05 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 8e-05 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 1e-04 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 1e-04 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 1e-04 | |
| 1qls_A | 99 | S100C protein, calgizzarin; metal-binding protein/ | 2e-04 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 3e-04 |
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 750 bits (1939), Expect = 0.0
Identities = 172/468 (36%), Positives = 248/468 (52%), Gaps = 16/468 (3%)
Query: 89 VLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR 148
+ H T D Y R LG+G FG LC + TG E A K ISKR++ + D E + R
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI 208
E+Q++ L H NI+ + +ED ++V E+ GGELFD II R +SE AA + R
Sbjct: 76 EVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 134
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYY 268
++ + H ++HRDLKPEN LL +K D +++ IDFGLS F+ + D +G+ YY
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 194
Query: 269 VAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328
+APEVL Y + DVW+ GVILYILLSG PPF + I V KG FE W +
Sbjct: 195 IAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 254
Query: 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWI---CENGVAPDRSLDPAVLSRLKQFSAMN 385
S+SAKDLIRKML PS R++A + L H WI + ++ D + ++QF
Sbjct: 255 SESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQ 314
Query: 386 KLKKMALRVIAESL-SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY---------- 434
KL + AL + L S++E L +F MD + G + EL G +
Sbjct: 315 KLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASM 374
Query: 435 -GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGY 493
++ + E+ ++DA D D +G I+Y EF+ + L E L AF+ FD D SG
Sbjct: 375 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGK 434
Query: 494 ITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541
I+ EL ++ + ++ EVD++NDG +D+ EF M+ K
Sbjct: 435 ISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKLC 482
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 750 bits (1938), Expect = 0.0
Identities = 169/496 (34%), Positives = 246/496 (49%), Gaps = 23/496 (4%)
Query: 67 PRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIE 126
S ++N+ +GI + K I + Y RKLG G +G LC E E
Sbjct: 4 HHHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSE 63
Query: 127 FACKSISKRKLIS----------REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176
A K I K + + E++ EI ++ L H NI+ + +ED +
Sbjct: 64 KAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKKYFY 122
Query: 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK 236
+V E GGELF++II R + E AA + + I+ + H ++HRD+KPEN LL NK
Sbjct: 123 LVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK 182
Query: 237 DDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLS 296
+ ++K +DFGLS FF D +G+ YY+APEVL K Y + DVW+ GVI+YILL
Sbjct: 183 NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLC 242
Query: 297 GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356
G PPF + Q I V KG F+ + W ISD AK+LI+ ML ++R TA E L
Sbjct: 243 GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302
Query: 357 PWI---CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSE-EEIAGLKEMFK 412
WI N D+ LS +++F KL + A+ I L+ EE L ++FK
Sbjct: 303 RWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFK 362
Query: 413 AMDTDNSGAITFDELKAGLRRYGST--------LKDTEIRDLMDAADVDNSGTIDYGEFI 464
+D + G + EL G + + E+ +++ D D +G I+Y EFI
Sbjct: 363 KLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFI 422
Query: 465 AATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDN 524
+ + L EE L AF FD D SG IT +EL ++++ D++ E DQ+
Sbjct: 423 SVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNK 482
Query: 525 DGRIDYGEFVAMMQKG 540
D ID+ EFV+MM K
Sbjct: 483 DNMIDFDEFVSMMHKI 498
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 744 bits (1923), Expect = 0.0
Identities = 163/488 (33%), Positives = 257/488 (52%), Gaps = 15/488 (3%)
Query: 67 PRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIE 126
S +++ + + + K ++ ++Y +KLG G +G LC + T +E
Sbjct: 5 HHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVE 64
Query: 127 FACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGE 186
A K I K + S + E+ ++ L H NI+ + +ED ++VME GGE
Sbjct: 65 RAIKIIRKTSV-STSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKGGE 122
Query: 187 LFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAID 246
LFD II R ++E AA + + ++ V H ++HRDLKPEN LL +K+ D +K +D
Sbjct: 123 LFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVD 182
Query: 247 FGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQ 306
FGLS F+ + + +G+ YY+APEVL K Y + DVW+ GVIL+ILL+G PPF +T
Sbjct: 183 FGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTD 242
Query: 307 QGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAP 366
Q I V KG F+S W +S+ AKDLI++ML R++A + L HPWI E
Sbjct: 243 QEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKK 302
Query: 367 DRS----LDPAVLSRLKQFSAMNKLKKMALRVIAESL-SEEEIAGLKEMFKAMDTDNSGA 421
+ + +++F KL + AL +A L S+EE L ++F+ +D + G
Sbjct: 303 ESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQ 362
Query: 422 ITFDELKAGLRRYGS--------TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL 473
+ EL G + ++E+ ++ AAD D +G IDY EF+ + L
Sbjct: 363 LDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSL 422
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEF 533
++ L +AFQ FD+DG+G I+VDEL ++ +++I +D +NDG +D+ EF
Sbjct: 423 LSKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEF 482
Query: 534 VAMMQKGN 541
M+QK
Sbjct: 483 CKMIQKLC 490
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 742 bits (1918), Expect = 0.0
Identities = 179/470 (38%), Positives = 254/470 (54%), Gaps = 23/470 (4%)
Query: 92 HKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQ 151
+ + Y + LG+G FG C + T E+A K I+K +D + RE++
Sbjct: 15 YFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVE 73
Query: 152 IMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
++ L H NI+ + EDS +IV EL GGELFD II+R +SE AA + + +
Sbjct: 74 LLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS 132
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAP 271
+ H ++HRDLKPEN LL +K+ D +K IDFGLS F+ D +G+ YY+AP
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 272 EVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331
EVL Y + DVW+AGVILYILLSG PPF+ + + I V G F+ W ISD
Sbjct: 193 EVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD 252
Query: 332 AKDLIRKMLCSQPSERLTAHEVLCHPWI----CENGVAPDRSLDPAVLSRLKQFSAMNKL 387
AKDLIRKML PS R+TA + L HPWI E D + ++ ++QF A KL
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKL 312
Query: 388 KKMALRVIAESLSE-EEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY------------ 434
+ AL +A L+ +E L E+F+ +DT+N G + DEL G +
Sbjct: 313 AQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLI 372
Query: 435 --GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSG 492
+ + +I LM D+D SG+I+Y EFIA+ + L E + AF+ FDKDGSG
Sbjct: 373 QNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSG 432
Query: 493 YITVDELQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540
I+ EL + ++ ++ LE II +VD + DG +D+ EFV M+Q
Sbjct: 433 KISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 687 bits (1776), Expect = 0.0
Identities = 134/456 (29%), Positives = 210/456 (46%), Gaps = 21/456 (4%)
Query: 91 GHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREI 150
+ Y L +LG+G F C ++ G E+A I+ +KL S D + + RE
Sbjct: 3 TITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREA 61
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIV 210
+I L H NIV + + + +++ +L GGELF+ I+ R +YSE A+ + I+
Sbjct: 62 RICRLL-KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL 120
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYV 269
V CH +GV+HR+LKPEN LL +K ++K DFGL++ + Q + G+P Y+
Sbjct: 121 EAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYL 180
Query: 270 APEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328
+PEVL K YG D+W GVILYILL G PPFW E Q ++ + G DF S W +
Sbjct: 181 SPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 240
Query: 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLK 388
+ AKDLI KML PS+R+TA E L HPWI + LK+F+A KLK
Sbjct: 241 TPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 300
Query: 389 KMALRVIAES--LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDL 446
L V+ + S + +K + ++ ++G F+ + + + +L
Sbjct: 301 GAILTVMLATRNFSVRKQEIIKVTEQLIEAISNG--DFESYTKMCDPGMTAFEPEALGNL 358
Query: 447 MDAADVDNSGTIDYGEFIAATV-HLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE 505
++ +D+ F + N ++ + D S I + Q
Sbjct: 359 VEG--------LDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDA 410
Query: 506 HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541
+ + V DG+ + V + G
Sbjct: 411 GGIPRT-AQSEETRVWHRRDGKW---QIVHFHRSGA 442
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 563 bits (1453), Expect = 0.0
Identities = 118/369 (31%), Positives = 178/369 (48%), Gaps = 12/369 (3%)
Query: 66 APRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGI 125
P ++ M RG + + + + D Y + +LG+G F C TG+
Sbjct: 1 GPHMASMTGGQQMGRGSE-----FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGL 55
Query: 126 EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGG 185
EFA K I+ +KL S D + + RE +I L H NIV + + ++ ++V +L GG
Sbjct: 56 EFAAKIINTKKL-SARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGG 113
Query: 186 ELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAI 245
ELF+ I+ R YSE A+ + I+ + CHS G++HR+LKPEN LL +K ++K
Sbjct: 114 ELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 173
Query: 246 DFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAE 304
DFGL++ + + G+P Y++PEVL K Y D+W GVILYILL G PPFW E
Sbjct: 174 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 233
Query: 305 TQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364
Q ++ + G D+ S W ++ AK LI ML P +R+TA + L PWIC
Sbjct: 234 DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER 293
Query: 365 APDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITF 424
+ LK+F+A KLK L + + ++ L +
Sbjct: 294 VASAIHRQDTVDCLKKFNARRKLKGAILTTMI---ATRNLSNLGRNLLNKKEQGPPSTI- 349
Query: 425 DELKAGLRR 433
E +
Sbjct: 350 KESSESSQT 358
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 555 bits (1433), Expect = 0.0
Identities = 113/349 (32%), Positives = 174/349 (49%), Gaps = 12/349 (3%)
Query: 81 GIDNQTYYVLGHKTD--NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI 138
GI +L D D+Y L +G+G F C TG +FA K + K
Sbjct: 4 GISGGGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFT 63
Query: 139 SRE--DVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH 196
S ED++RE I H L H +IV + Y +++V E G +L I++R
Sbjct: 64 SSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRAD 122
Query: 197 ----YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV- 251
YSE A+ R I+ + CH ++HRD+KP LL +K++ +K FG+++
Sbjct: 123 AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182
Query: 252 FFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIF 310
+ G + VG+P+++APEV+ + YG DVW GVIL+ILLSG PF+ T++ +F
Sbjct: 183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLF 241
Query: 311 DAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSL 370
+ ++KG W IS+SAKDL+R+ML P+ER+T +E L HPW+ E +
Sbjct: 242 EGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIH 301
Query: 371 DPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNS 419
P + +L++F+A KLK L ++ E D +
Sbjct: 302 LPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSEDPT 350
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 546 bits (1408), Expect = 0.0
Identities = 119/331 (35%), Positives = 180/331 (54%), Gaps = 16/331 (4%)
Query: 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE---DVEDVRRE 149
+ +N+ D Y G +LG GQF C E +TG+++A K I KR+ S ED+ RE
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 150 IQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII 209
+ I+ + H N++T+ YE+ V +++EL AGGELFD + ++ +E +A E + I
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 210 VGVVEACHSLGVMHRDLKPENFLLVNKDDDFS-LKAIDFGLSVFFKPGQIFTDVVGSPYY 268
+ V HSL + H DLKPEN +L++++ +K IDFGL+ G F ++ G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 269 VAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327
VAPE++ + G EAD+W+ GVI YILLSG PF +T+Q V + +FE + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKL 387
S AKD IR++L P +R+T + L HPWI LSR M K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD-------TQQALSRKASAVNMEKF 296
Query: 388 KKMALRVIAESLSEEEIAGLKEMFKAMDTDN 418
KK A R + + S GL ++F+A +
Sbjct: 297 KKFAARKKSNNGSG---GGLNDIFEAQKIEW 324
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 528 bits (1362), Expect = 0.0
Identities = 120/345 (34%), Positives = 177/345 (51%), Gaps = 10/345 (2%)
Query: 56 SKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTT 115
+ ++ +S Y++ G D + D + + +LG+G
Sbjct: 10 GVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIV 69
Query: 116 YLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175
Y C + T +A K + K D + VR EI ++ L+ H NI+ +K +E +
Sbjct: 70 YRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTEI 123
Query: 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN 235
+V+EL GGELFDRI+++G+YSER AA+ + I+ V H G++HRDLKPEN L
Sbjct: 124 SLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYAT 183
Query: 236 KDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYIL 294
D LK DFGLS + + V G+P Y APE+L YGPE D+W+ G+I YIL
Sbjct: 184 PAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYIL 243
Query: 295 LSGVPPFWAET-QQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEV 353
L G PF+ E Q +F +L F S W +S +AKDL+RK++ P +RLT +
Sbjct: 244 LCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQA 303
Query: 354 LCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAES 398
L HPW+ G A + +L++F+A KLK V+A S
Sbjct: 304 LQHPWVT--GKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASS 346
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 520 bits (1341), Expect = 0.0
Identities = 114/351 (32%), Positives = 175/351 (49%), Gaps = 10/351 (2%)
Query: 92 HKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE---DVEDVRR 148
K + D Y +G +LG GQF C E +TG+E+A K I KR+ + E++ R
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIER 64
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI 208
E+ I+ + H NI+T+ YE+ V +++EL +GGELFD + Q+ SE +A +
Sbjct: 65 EVSILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS-LKAIDFGLSVFFKPGQIFTDVVGSPY 267
I+ V H+ + H DLKPEN +L++K+ +K IDFGL+ + G F ++ G+P
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 268 YVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326
+VAPE++ + G EAD+W+ GVI YILLSG PF +T+Q + DF+ + +
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
Query: 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV--APDRSLDPAVLSRLKQFSAM 384
S+ AKD IRK+L + +RLT E L HPWI A R L K+
Sbjct: 244 QTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVR 303
Query: 385 NKLKKMALRVIA-ESLSEEEIAGLK-EMFKAMDTDNSGAITFDELKAGLRR 433
+ K V L+ + + + + S + L
Sbjct: 304 RRWKLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIARRKALHP 354
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 521 bits (1344), Expect = 0.0
Identities = 111/398 (27%), Positives = 175/398 (43%), Gaps = 31/398 (7%)
Query: 36 TNSDYSTPS--LNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHK 93
+NS +P + Q + P P P + + + K
Sbjct: 3 SNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSG------LQIKK 56
Query: 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
I D + LG G G T +FA K + RRE+++
Sbjct: 57 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELH 108
Query: 154 HHLAGHKNIVTIKGAYEDSL----CVHIVMELCAGGELFDRIIQRGH--YSERKAAELTR 207
+ +IV I YE+ C+ IVME GGELF RI RG ++ER+A+E+ +
Sbjct: 109 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 168
Query: 208 IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY 267
I ++ HS+ + HRD+KPEN L +K + LK DFG + T +PY
Sbjct: 169 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 268 YVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAE----TQQGIFDAVLKGHIDFES 322
YVAPEVL Y D+W+ GVI+YILL G PPF++ G+ + G +F +
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288
Query: 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFS 382
W +S+ K LIR +L ++P++R+T E + HPWI ++ P L + + + +
Sbjct: 289 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKER 348
Query: 383 AMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSG 420
+ ++M + + E+I ++ K D N
Sbjct: 349 WEDVKEEMTSALATMRVDYEQI----KIKKIEDASNPL 382
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 517 bits (1333), Expect = 0.0
Identities = 109/336 (32%), Positives = 165/336 (49%), Gaps = 20/336 (5%)
Query: 89 VLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR 148
L + D Y + +G G + C AT +EFA K I K K D
Sbjct: 12 QLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTE 64
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI 208
EI+I+ H NI+T+K Y+D V++V EL GGEL D+I+++ +SER+A+ +
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFT 124
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS-LKAIDFGLSVFFKP-GQIFTDVVGSP 266
I VE H+ GV+HRDLKP N L V++ + ++ DFG + + + +
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA 184
Query: 267 YYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWA---ETQQGIFDAVLKGHIDFES 322
+VAPEVL + Y D+W+ GV+LY +L+G PF +T + I + G
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSG 244
Query: 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQ-- 380
W +SD+AKDL+ KML P +RLTA VL HPWI P L+ L +
Sbjct: 245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGA 304
Query: 381 ----FSAMNKLKKMALRVIAESLSEEEIAGLKEMFK 412
+SA+N+ + L + S + G+K++
Sbjct: 305 MAATYSALNRNQSPVLEPVGRSTLAQR-RGIKKITS 339
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 514 bits (1326), Expect = 0.0
Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 6/316 (1%)
Query: 81 GIDNQTYYVLGHKTDNIRDLYTL-GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS 139
G+D T + +N + Y L ++LG+G+F C +TG E+A K + KR+
Sbjct: 10 GVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-G 68
Query: 140 REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR--GHY 197
++ ++ EI ++ ++ + YE++ + +++E AGGE+F +
Sbjct: 69 QDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMV 128
Query: 198 SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257
SE L + I+ V H ++H DLKP+N LL + +K +DFG+S
Sbjct: 129 SENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188
Query: 258 IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG 316
+++G+P Y+APE+L D+W G+I Y+LL+ PF E Q + + +
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV 248
Query: 317 HIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAP-DRSLDPAVL 375
++D+ + + +S A D I+ +L P +R TA L H W+ + + +
Sbjct: 249 NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSS 308
Query: 376 SRLKQFSAMNKLKKMA 391
S+ + S + K +
Sbjct: 309 SQTQDHSVRSSEDKTS 324
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 509 bits (1313), Expect = e-180
Identities = 106/326 (32%), Positives = 157/326 (48%), Gaps = 28/326 (8%)
Query: 93 KTDNIRDLYTLG---RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRRE 149
K Y L + LG+G F C + FA K ISKR + ++E
Sbjct: 2 KDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME------ANTQKE 55
Query: 150 IQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII 209
I + GH NIV + + D L +VMEL GGELF+RI ++ H+SE +A+ + R +
Sbjct: 56 ITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKL 115
Query: 210 VGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTDVVGSPYY 268
V V H +GV+HRDLKPEN L +++D+ +K IDFG + P Q + +Y
Sbjct: 116 VSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHY 175
Query: 269 VAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQ-------GIFDAVLKGHIDF 320
APE+L ++ Y D+W+ GVILY +LSG PF + + I + KG F
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF 235
Query: 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSL---------D 371
E + W +S AKDLI+ +L P++RL + + W+ + L
Sbjct: 236 EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSG 295
Query: 372 PAVLSRLK-QFSAMNKLKKMALRVIA 396
AV + +K F A NK K+ +
Sbjct: 296 AAVHTCVKATFHAFNKYKREGFCLQN 321
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 508 bits (1310), Expect = e-179
Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 12/317 (3%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
+ + Y + LG+G+FG + C E ++ + K + + D V++EI I++
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNI 57
Query: 156 LAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVE 214
H+NI+ + ++E + ++ E +G ++F+RI +ER+ + ++
Sbjct: 58 A-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQ 116
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL 274
HS + H D++PEN + + ++K I+FG + KPG F + +P Y APEV
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSS-TIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVH 175
Query: 275 L-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333
D+W+ G ++Y+LLSG+ PF AET Q I + ++ F+ + + IS A
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235
Query: 334 DLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALR 393
D + ++L + R+TA E L HPW+ + + V+ LK + L K L
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQ----KIERVSTKVIRTLKHRRYYHTLIKKDLN 291
Query: 394 VIAESLSEEEIAGLKEM 410
++ + ++
Sbjct: 292 MVVSAARISCGGAIRSQ 308
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 506 bits (1305), Expect = e-179
Identities = 109/312 (34%), Positives = 171/312 (54%), Gaps = 9/312 (2%)
Query: 92 HKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE---DVEDVRR 148
K + D Y +G +LG GQF C E +TG+E+A K I KR+ + E++ R
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI 208
E+ I+ + H N++T+ YE+ V +++EL +GGELFD + Q+ SE +A +
Sbjct: 65 EVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS-LKAIDFGLSVFFKPGQIFTDVVGSPY 267
I+ V H+ + H DLKPEN +L++K+ +K IDFGL+ + G F ++ G+P
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 268 YVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326
+VAPE++ + G EAD+W+ GVI YILLSG PF +T+Q + DF+ + +
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243
Query: 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC--ENGVAPDRSLDPAVLSRLKQFSAM 384
S+ AKD IRK+L + +RLT E L HPWI +N A R L ++
Sbjct: 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVR 303
Query: 385 NKLKKMALRVIA 396
+ K + +++
Sbjct: 304 RRWKL-SFSIVS 314
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 504 bits (1299), Expect = e-179
Identities = 112/280 (40%), Positives = 164/280 (58%), Gaps = 4/280 (1%)
Query: 91 GHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREI 150
G +I YTL +G+G +G + + T I A K I K + EDV+ ++EI
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEI 57
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIV 210
+IM L H NI+ + +ED+ +++VMELC GGELF+R++ + + E AA + + ++
Sbjct: 58 EIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 116
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVA 270
V CH L V HRDLKPENFL + D LK IDFGL+ FKPG++ VG+PYYV+
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 271 PEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330
P+VL YGPE D W+AGV++Y+LL G PPF A T + + +G F W +S
Sbjct: 177 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSP 236
Query: 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSL 370
A+ LIR++L P +R+T+ + L H W + + R+L
Sbjct: 237 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 276
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 497 bits (1282), Expect = e-176
Identities = 115/271 (42%), Positives = 156/271 (57%), Gaps = 2/271 (0%)
Query: 92 HKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQ 151
+ + Y + LG+G FG C + T E+A K I+K + +D + RE++
Sbjct: 15 YFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVE 73
Query: 152 IMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
++ L H NI+ + EDS +IV EL GGELFD II+R +SE AA + + +
Sbjct: 74 LLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS 132
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAP 271
+ H ++HRDLKPEN LL +K+ D +K IDFGLS F+ D +G+ YY+AP
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 272 EVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331
EVL Y + DVW+AGVILYILLSG PPF+ + + I V G F+ W ISD
Sbjct: 193 EVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD 252
Query: 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362
AKDLIRKML PS R+TA + L HPWI +
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 495 bits (1278), Expect = e-175
Identities = 104/275 (37%), Positives = 150/275 (54%), Gaps = 3/275 (1%)
Query: 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
+ D Y + +LG+G F C TG+EFA K I+ +KL S D + + RE +I
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARIC 59
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
L H NIV + + ++ ++V +L GGELF+ I+ R YSE A+ + I+ +
Sbjct: 60 RKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEV 273
CHS G++HR+LKPEN LL +K ++K DFGL++ + + G+P Y++PEV
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 178
Query: 274 LLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332
L K Y D+W GVILYILL G PPFW E Q ++ + G D+ S W ++ A
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPD 367
K LI ML P +R+TA + L PWIC
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWICNRERVAS 273
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 496 bits (1280), Expect = e-174
Identities = 104/366 (28%), Positives = 161/366 (43%), Gaps = 21/366 (5%)
Query: 6 RGSFTGKLYQGYSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNS 65
S + + N N + + + + Q S +
Sbjct: 7 HSSGVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQ------SANLLAEAKK 60
Query: 66 APRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGI 125
P +N+ + + + Y +G+G C ATG
Sbjct: 61 LNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGH 120
Query: 126 EFACKSISKRKLIS-----REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180
EFA K + E E RRE I+ +AGH +I+T+ +YE S + +V +
Sbjct: 121 EFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFD 180
Query: 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240
L GELFD + ++ SE++ + R ++ V H+ ++HRDLKPEN LL DD+
Sbjct: 181 LMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNM 237
Query: 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL-------LKHYGPEADVWTAGVILYI 293
++ DFG S +PG+ ++ G+P Y+APE+L YG E D+W GVIL+
Sbjct: 238 QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFT 297
Query: 294 LLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEV 353
LL+G PPFW Q + +++G F S W S + KDLI ++L P RLTA +
Sbjct: 298 LLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA 357
Query: 354 LCHPWI 359
L HP+
Sbjct: 358 LQHPFF 363
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 503 bits (1298), Expect = e-174
Identities = 117/421 (27%), Positives = 174/421 (41%), Gaps = 13/421 (3%)
Query: 32 NSDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLG 91
S ++ + + + K S DN + +
Sbjct: 90 QSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVE 149
Query: 92 HKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQ 151
K D++ D Y + +LG G FG + TE ATG FA K + D E VR+EIQ
Sbjct: 150 IKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQ 206
Query: 152 IMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRII-QRGHYSERKAAELTRIIV 210
M L H +V + A+ED + ++ E +GGELF+++ + SE +A E R +
Sbjct: 207 TMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC 265
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVA 270
+ H +H DLKPEN + K + LK IDFGL+ P Q G+ + A
Sbjct: 266 KGLCHMHENNYVHLDLKPENIMFTTKRSN-ELKLIDFGLTAHLDPKQSVKVTTGTAEFAA 324
Query: 271 PEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329
PEV K G D+W+ GV+ YILLSG+ PF E V + + + IS
Sbjct: 325 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS 384
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICE-NGVAPDRSLDPAVLSRLKQFSAMNKLK 388
+ KD IRK+L + P+ R+T H+ L HPW+ N D + SR + K K
Sbjct: 385 EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP---SSRYTKIRDSIKTK 441
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD 448
A I+ + K + S F + R+ TE+ +
Sbjct: 442 YDA--WPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQS 499
Query: 449 A 449
A
Sbjct: 500 A 500
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 495 bits (1277), Expect = e-173
Identities = 98/377 (25%), Positives = 159/377 (42%), Gaps = 28/377 (7%)
Query: 52 SQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQ 111
S K + D + K ++ D Y + +LG G
Sbjct: 4 SHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGA 63
Query: 112 FGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171
FG + C E ATG F K I+ D V+ EI IM+ L H ++ + A+ED
Sbjct: 64 FGVVHRCVEKATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLH-HPKLINLHDAFED 119
Query: 172 SLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEACHSLGVMHRDLKPEN 230
+ +++E +GGELFDRI + SE + R ++ H ++H D+KPEN
Sbjct: 120 KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPEN 179
Query: 231 FLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGV 289
+ K S+K IDFGL+ P +I + + APE++ + G D+W GV
Sbjct: 180 IMCETKKAS-SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 238
Query: 290 ILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLT 349
+ Y+LLSG+ PF E V + +F+ D + +S AKD I+ +L +P +RLT
Sbjct: 239 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT 298
Query: 350 AHEVLCHPWICENGVAPDRSLDPAVLS---------------------RLKQFSAMNKLK 388
H+ L HPW+ + + + + R+ FS++ K +
Sbjct: 299 VHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHR 358
Query: 389 KMALRVIAESLSEEEIA 405
++ +E
Sbjct: 359 PQEYQIYDSYFDRKEAV 375
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 489 bits (1262), Expect = e-173
Identities = 102/283 (36%), Positives = 159/283 (56%), Gaps = 6/283 (2%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE---DVEDVRREIQI 152
+ D Y +G +LG GQF C + TG E+A K I KR+L S E++ RE+ I
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGV 212
+ + H NI+T+ +E+ V +++EL +GGELFD + ++ +E +A + + I+
Sbjct: 62 LREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120
Query: 213 VEACHSLGVMHRDLKPENFLLVNKD-DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAP 271
V HS + H DLKPEN +L++K+ + +K IDFG++ + G F ++ G+P +VAP
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 272 EVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330
E++ + G EAD+W+ GVI YILLSG PF ET+Q + + DF+ + + S+
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 240
Query: 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPA 373
AKD IR++L P R+T + L H WI R D
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGEDSG 283
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 488 bits (1259), Expect = e-172
Identities = 104/291 (35%), Positives = 155/291 (53%), Gaps = 16/291 (5%)
Query: 91 GHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRK--LISREDVEDVR- 147
H T + Y LG+G C T E+A K I S E+V+++R
Sbjct: 9 SHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 148 ---REIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE 204
+E+ I+ ++GH NI+ +K YE + +V +L GELFD + ++ SE++ +
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 205 LTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264
+ R ++ V+ A H L ++HRDLKPEN LL DDD ++K DFG S PG+ +V G
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCG 185
Query: 265 SPYYVAPEVL-------LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH 317
+P Y+APE++ YG E D+W+ GVI+Y LL+G PPFW Q + ++ G+
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 245
Query: 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDR 368
F S W SD+ KDL+ + L QP +R TA E L HP+ + V R
Sbjct: 246 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEVR 296
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 482 bits (1242), Expect = e-170
Identities = 93/274 (33%), Positives = 148/274 (54%), Gaps = 8/274 (2%)
Query: 92 HKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQ 151
+ I DL+ RKLG G FG +L E ++G+E K+I+K + + +E + EI+
Sbjct: 15 YFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIE 72
Query: 152 IMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR----GHYSERKAAELTR 207
++ L H NI+ I +ED ++IVME C GGEL +RI+ SE AEL +
Sbjct: 73 VLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMK 131
Query: 208 IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY 267
++ + HS V+H+DLKPEN L + +K IDFGL+ FK + T+ G+
Sbjct: 132 QMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTAL 191
Query: 268 YVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327
Y+APEV + + D+W+AGV++Y LL+G PF + + + ++ + P
Sbjct: 192 YMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP- 250
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361
++ A DL+++ML P R +A +VL H W +
Sbjct: 251 LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 482 bits (1242), Expect = e-169
Identities = 98/316 (31%), Positives = 153/316 (48%), Gaps = 36/316 (11%)
Query: 93 KTDNIRDLYTLGRK-LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQ 151
+ D+Y L LG+G C + T E+A K I K+ V RE++
Sbjct: 6 FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVE 62
Query: 152 IMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
+++ GH+N++ + +E+ ++V E GG + I +R H++E +A+ + + +
Sbjct: 63 MLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVAS 122
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV--------V 263
++ H+ G+ HRDLKPEN L + + +K DF L K + +
Sbjct: 123 ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182
Query: 264 GSPYYVAPEVLLKH------YGPEADVWTAGVILYILLSGVPPFWAE------------- 304
GS Y+APEV+ Y D+W+ GVILYILLSG PPF
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 305 --TQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362
Q +F+++ +G +F W IS +AKDLI K+L +RL+A +VL HPW+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV--Q 300
Query: 363 GVAPDRSLD-PAVLSR 377
G AP+ +L P VL R
Sbjct: 301 GCAPENTLPTPMVLQR 316
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 481 bits (1239), Expect = e-169
Identities = 102/318 (32%), Positives = 150/318 (47%), Gaps = 18/318 (5%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE-----DVEDVRREI 150
+RD Y + + LG G G L E T + A K ISKRK +V EI
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIV 210
+I+ L H I+ IK ++ +IV+EL GGELFD+++ E ++
Sbjct: 67 EILKKL-NHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVA 270
V+ H G++HRDLKPEN LL ++++D +K DFG S + + G+P Y+A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 271 PEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAE-TQQGIFDAVLKGHIDFESDPW 325
PEVL+ Y D W+ GVIL+I LSG PPF TQ + D + G +F + W
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMN 385
+S+ A DL++K+L P R T E L HPW+ D + L + +
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ------DEDMKRKFQDLLSEENEST 298
Query: 386 KLKKMALRVIAESLSEEE 403
L ++ + E
Sbjct: 299 ALPQVLAQPSTSRKRPRE 316
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 479 bits (1234), Expect = e-168
Identities = 112/330 (33%), Positives = 164/330 (49%), Gaps = 25/330 (7%)
Query: 89 VLGHKTDNIRDLYTLGRK-LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR 147
K + D Y L ++ LG G G C TG + A K + R
Sbjct: 18 GPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------KAR 69
Query: 148 REIQIMHHLAGHKNIVTIKGAYEDSL----CVHIVMELCAGGELFDRIIQRGH--YSERK 201
+E+ +G +IV I YE+ C+ I+ME GGELF RI +RG ++ER+
Sbjct: 70 QEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTERE 129
Query: 202 AAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD 261
AAE+ R I ++ HS + HRD+KPEN L +K+ D LK DFG + + T
Sbjct: 130 AAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT- 188
Query: 262 VVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQ----GIFDAVLKG 316
+PYYVAPEVL Y D+W+ GVI+YILL G PPF++ T Q G+ + G
Sbjct: 189 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 248
Query: 317 HIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLD-PAVL 375
F + W +S+ AK LIR +L + P+ERLT + + HPWI ++ V P L VL
Sbjct: 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVL 308
Query: 376 SRLKQFSAMNKLKKMALRVIAES-LSEEEI 404
K +++K+ +A + +++
Sbjct: 309 QEDKDH--WDEVKEEMTSALATMRVDYDQV 336
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 471 bits (1213), Expect = e-164
Identities = 105/372 (28%), Positives = 173/372 (46%), Gaps = 15/372 (4%)
Query: 24 SNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGID 83
+ N + S + + +S + + S +
Sbjct: 12 VDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPA 71
Query: 84 NQTYYVLGHKTDNIRDLYTLGRK--LGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE 141
+ ++ K + YT+ + LG G+FG + C E ATG++ A K I R + +
Sbjct: 72 PFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---K 128
Query: 142 DVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH-YSER 200
D E+V+ EI +M+ L H N++ + A+E + +VME GGELFDRII + +E
Sbjct: 129 DKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL 187
Query: 201 KAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT 260
+ I + H + ++H DLKPEN L VN+D +K IDFGL+ +KP +
Sbjct: 188 DTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLK 246
Query: 261 DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID 319
G+P ++APEV+ D+W+ GVI Y+LLSG+ PF + + +L D
Sbjct: 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD 306
Query: 320 FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLK 379
E + + IS+ AK+ I K+L + S R++A E L HPW+ D L + ++ K
Sbjct: 307 LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLS------DHKLHSRLSAQKK 360
Query: 380 QFSAMNKLKKMA 391
+ + +
Sbjct: 361 KNRGSDAQDFVT 372
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 448 bits (1154), Expect = e-156
Identities = 92/314 (29%), Positives = 143/314 (45%), Gaps = 39/314 (12%)
Query: 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI 152
K I D + LG G G T +FA K + RRE+++
Sbjct: 12 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVEL 63
Query: 153 MHHLAGHKNIVTIKGAYEDSL----CVHIVMELCAGGELFDRIIQRGH--YSERKAAELT 206
+ +IV I YE+ C+ IVME GGELF RI RG ++ER+A+E+
Sbjct: 64 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123
Query: 207 RIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSP 266
+ I ++ HS+ + HRD+KPEN L +K + LK DFG
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF----------------- 166
Query: 267 YYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAE----TQQGIFDAVLKGHIDFES 322
A E + Y D+W+ GVI+YILL G PPF++ G+ + G +F +
Sbjct: 167 ---AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 223
Query: 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFS 382
W +S+ K LIR +L ++P++R+T E + HPWI ++ P L + + + +
Sbjct: 224 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE- 282
Query: 383 AMNKLKKMALRVIA 396
+K+ +A
Sbjct: 283 RWEDVKEEMTSALA 296
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 441 bits (1136), Expect = e-152
Identities = 97/282 (34%), Positives = 142/282 (50%), Gaps = 12/282 (4%)
Query: 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE-----DVEDVR 147
+RD Y + + LG G G L E T + A + ISKRK +V
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 188
Query: 148 REIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTR 207
EI+I+ L H I+ IK ++ +IV+EL GGELFD+++ E
Sbjct: 189 TEIEILKKL-NHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 208 IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY 267
++ V+ H G++HRDLKPEN LL ++++D +K DFG S + + G+P
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 306
Query: 268 YVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAE-TQQGIFDAVLKGHIDFES 322
Y+APEVL+ Y D W+ GVIL+I LSG PPF TQ + D + G +F
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 366
Query: 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364
+ W +S+ A DL++K+L P R T E L HPW+ + +
Sbjct: 367 EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM 408
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 435 bits (1121), Expect = e-151
Identities = 99/334 (29%), Positives = 148/334 (44%), Gaps = 52/334 (15%)
Query: 85 QTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL--ISRED 142
+ Y G ++ Y L +GQG +G + E T A K ++K K+ I+ +D
Sbjct: 12 ENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKD 71
Query: 143 VEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH------ 196
VE ++ E+++M L H NI + YED + +VMELC GG L D++
Sbjct: 72 VERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKC 130
Query: 197 ----------------------------------YSERKAAELTRIIVGVVEACHSLGVM 222
E+ + + R I + H+ G+
Sbjct: 131 AMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGIC 190
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-----GQIFTDVVGSPYYVAPEVL--- 274
HRD+KPENFL + F +K +DFGLS F T G+PY+VAPEVL
Sbjct: 191 HRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT 249
Query: 275 LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334
+ YGP+ D W+AGV+L++LL G PF VL + FE+ + ++S A+D
Sbjct: 250 NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARD 309
Query: 335 LIRKMLCSQPSERLTAHEVLCHPWICENGVAPDR 368
L+ +L ER A L HPWI + +
Sbjct: 310 LLSNLLNRNVDERFDAMRALQHPWISQFSDKIYK 343
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197 | Back alignment and structure |
|---|
Score = 323 bits (831), Expect = e-109
Identities = 66/194 (34%), Positives = 107/194 (55%), Gaps = 5/194 (2%)
Query: 351 HEVLCHPWICEN-GVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKE 409
H H EN L +L LK F N+LKK+AL +IA+ L + EI L+
Sbjct: 2 HHHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRN 61
Query: 410 MFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469
+F A+D DNSG ++ E+ GL++ G +I ++ D + SG I Y +F+AAT+
Sbjct: 62 IFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATID 121
Query: 470 LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNM----TDVLLEDIIREVDQDND 525
++E + F++FD DG+G I+V+EL++ ++ D ++ +++EVD + D
Sbjct: 122 KQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGD 181
Query: 526 GRIDYGEFVAMMQK 539
G ID+ EF+ MM K
Sbjct: 182 GEIDFHEFMLMMSK 195
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 324 bits (831), Expect = e-106
Identities = 85/419 (20%), Positives = 151/419 (36%), Gaps = 32/419 (7%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ LG G GT + + A K I E RE+Q++ H
Sbjct: 26 FCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRILP------ECFSFADREVQLLRESDEHP 78
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEACHSL 219
N++ +D +I +ELC L + + Q+ + + L + + HSL
Sbjct: 79 NVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL 137
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAI--DFGLSVFFKPGQ----IFTDVVGSPYYVAPEV 273
++HRDLKP N L+ + +KA+ DFGL G+ + V G+ ++APE+
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM 197
Query: 274 LL----KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328
L ++ D+++AG + Y ++S G PF Q+ + +D P
Sbjct: 198 LSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLH-PEKHE 256
Query: 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLK 388
A++LI KM+ P +R +A VL HP+ V R+++ S +
Sbjct: 257 DVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL--EKQLQFFQDVSDRIEKESLDGPIV 314
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLR--RYGSTLKDTEIRDL 446
K R + + + + D ++ LR R ++
Sbjct: 315 KQLERGGRAVVKMDWRENITVPLQT-DLRKFRTYKGGSVRDLLRAMRNKKHHYRELPAEV 373
Query: 447 MDAADVDNSGTIDY--GEFIAATVHLNKLER----EEHLVAAFQYFDKDGSGYITVDEL 499
+ + Y F H + E + + + +T D L
Sbjct: 374 RETLGTLPDDFVCYFTSRFPHLLAHTYRAMELCSHERLFQPYYFHEPPEPQPPVTPDAL 432
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 312 bits (800), Expect = e-101
Identities = 73/344 (21%), Positives = 126/344 (36%), Gaps = 48/344 (13%)
Query: 90 LGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRRE 149
+ + ++++L + LG G GT G A K + + E
Sbjct: 6 IPNFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF------CDIALME 58
Query: 150 IQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYS-------ERKA 202
I+++ H N++ + ++I +ELC L D + + E
Sbjct: 59 IKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNP 117
Query: 203 AELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD----------DDFSLKAIDFGLSVF 252
L R I V HSL ++HRDLKP+N L+ ++ + DFGL
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 253 FKPGQ-----IFTDVVGSPYYVAPEVLL--------KHYGPEADVWTAGVILYILLS-GV 298
GQ + G+ + APE+L + D+++ G + Y +LS G
Sbjct: 178 LDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Query: 299 PPFWAETQQGIFDAVLKGHIDF---ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355
PF + + +++G + + A DLI +M+ P +R TA +VL
Sbjct: 238 HPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
Query: 356 HPWICENGVAP----DRSLDPAVLSRLKQFSAMNKLKKMALRVI 395
HP S + +R + + K + VI
Sbjct: 296 HPLFWPKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVI 339
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 298 bits (764), Expect = 3e-99
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 354 LCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKA 413
+ H +G VL K + + K +K+A+ +IA+ ++ ++ LK F
Sbjct: 1 MHHHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLV 60
Query: 414 MDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL 473
+D D G IT ++LK GL + G L L+D D D SG IDY EFIAA + +L
Sbjct: 61 LDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQL 119
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMT-------DVLLEDIIREVDQDNDG 526
++ + AF+ FD D G IT EL N ++ +IR+VD++NDG
Sbjct: 120 S-KKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDG 178
Query: 527 RIDYGEFVAMMQ 538
+ID+ EF MM+
Sbjct: 179 KIDFHEFSEMMK 190
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166 | Back alignment and structure |
|---|
Score = 285 bits (732), Expect = 9e-95
Identities = 127/165 (76%), Positives = 144/165 (87%)
Query: 379 KQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTL 438
KQFSAMNK KKMALRVIAESLSEEEIAGLKEMF +D D SG ITF+ELKAGL+R G+ L
Sbjct: 1 KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANL 60
Query: 439 KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDE 498
K++EI DLM AADVDNSGTIDY EFIAAT+HLNK+ERE+HL AAF YFDKDGSGYIT DE
Sbjct: 61 KESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 499 LQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVG 543
LQQAC E + DV +E+++R+VDQDNDGRIDY EFVAMMQKG++
Sbjct: 121 LQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSIT 165
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 285 bits (732), Expect = 3e-92
Identities = 101/360 (28%), Positives = 154/360 (42%), Gaps = 42/360 (11%)
Query: 42 TPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLY 101
P+ + V + P A I D + R Y
Sbjct: 3 APADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVD------------------PRSRRR-Y 43
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161
GR LG+G F + ++ T FA K + K L+ E + EI I LA H++
Sbjct: 44 VRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQH 102
Query: 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGV 221
+V G +ED+ V +V+ELC L + +R +E +A R IV + H V
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 162
Query: 222 MHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEVLL-KHYG 279
+HRDLK N L ++D +K DFGL+ + G+ + G+P Y+APEVL K +
Sbjct: 163 IHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339
E DVW+ G I+Y LL G PPF + + + K ++ I+ A LI+KM
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKH--INPVAASLIQKM 275
Query: 340 LCSQPSERLTAHEVLCHPWICEN-----------GVAPDRSLDPAVLSR--LKQFSAMNK 386
L + P+ R T +E+L + + P S+ P+ L K + +NK
Sbjct: 276 LQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPLTVLNK 335
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 281 bits (720), Expect = 4e-91
Identities = 88/273 (32%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 92 HKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQ 151
+ R Y GR LG+G F + ++ T FA K + K L+ E + EI
Sbjct: 9 VDPRSRRR-YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEIS 67
Query: 152 IMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
I LA H+++V G +ED+ V +V+ELC L + +R +E +A R IV
Sbjct: 68 IHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL 126
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVA 270
+ H V+HRDLK N L ++D +K DFGL+ + G+ + G+P Y+A
Sbjct: 127 GCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 183
Query: 271 PEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329
PEVL K + E DVW+ G I+Y LL G PPF + + + K ++ I+
Sbjct: 184 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKH--IN 239
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362
A LI+KML + P+ R T +E+L +
Sbjct: 240 PVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 280 bits (718), Expect = 1e-90
Identities = 63/304 (20%), Positives = 113/304 (37%), Gaps = 43/304 (14%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
L+ L LGQG + TG FA K + V+ RE +++
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKK 63
Query: 156 LAGHKNIVTIKGAYEDSLCVHI--VMELCAGGELFDRIIQRGH---YSERKAAELTRIIV 210
L HKNIV + E++ H +ME C G L+ + + + E + + R +V
Sbjct: 64 LN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 211 GVVEACHSLGVMHRDLKPENFLL-VNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV 269
G + G++HR++KP N + + +D K DFG + + + F + G+ Y+
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYL 182
Query: 270 APEVL---------LKHYGPEADVWTAGVILYILLSGVPPFWA----ETQQGIFDAVLKG 316
P++ K YG D+W+ GV Y +G PF + + ++ G
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242
Query: 317 ---------------HIDFESD--PWPLISDSAKD----LIRKMLCSQPSERLTAHEVLC 355
ID+ D +S + ++ +L + + +
Sbjct: 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302
Query: 356 HPWI 359
Sbjct: 303 ETSD 306
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191 | Back alignment and structure |
|---|
Score = 273 bits (701), Expect = 7e-90
Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 12/185 (6%)
Query: 368 RSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSE-EEIAGLKEMFKAMDTDNSGAITFDE 426
+ L +K+F + KL + A+ + L+ EE L ++F+ +D + G + E
Sbjct: 2 KHALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKE 61
Query: 427 LKAGLRR-----------YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475
L G R+ S+ + E+ ++ + D D +G I+Y EF+ + L
Sbjct: 62 LIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLS 121
Query: 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVA 535
E L+AAFQ FD DGSG IT +EL + + D +++E D++NDG +D+ EFV
Sbjct: 122 RERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVE 181
Query: 536 MMQKG 540
MMQK
Sbjct: 182 MMQKI 186
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 271 bits (696), Expect = 8e-88
Identities = 89/265 (33%), Positives = 143/265 (53%), Gaps = 11/265 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ +G LG+G F Y I TG+E A K I K+ + V+ V+ E++I L H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HP 71
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSL 219
+I+ + +EDS V++V+E+C GE+ + R +SE +A I+ + HS
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEVLL-KH 277
G++HRDL N LL + ++K DFGL+ K P + + G+P Y++PE+
Sbjct: 132 GILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA 188
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
+G E+DVW+ G + Y LL G PPF +T + + V+ D+E + +S AKDLI
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPSF--LSIEAKDLIH 244
Query: 338 KMLCSQPSERLTAHEVLCHPWICEN 362
++L P++RL+ VL HP++ N
Sbjct: 245 QLLRRNPADRLSLSSVLDHPFMSRN 269
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 267 bits (685), Expect = 3e-86
Identities = 85/270 (31%), Positives = 137/270 (50%), Gaps = 10/270 (3%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ +GR LG+G+FG YL E + A K + K +L +RRE++I HL H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NI+ + G + D+ V++++E G ++ + + + E++ A + + CHS
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYG 279
V+HRD+KPEN LL LK DFG SV + + G+ Y+ PE++ + +
Sbjct: 130 VIHRDIKPENLLL---GSAGELKIADFGWSVHAPSSRRTD-LCGTLDYLPPEMIEGRMHD 185
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339
+ D+W+ GV+ Y L G PPF A T Q + + + F + +++ A+DLI ++
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DF--VTEGARDLISRL 241
Query: 340 LCSQPSERLTAHEVLCHPWICENGVAPDRS 369
L PS+R EVL HPWI N P
Sbjct: 242 LKHNPSQRPMLREVLEHPWITANSSKPSNC 271
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 267 bits (685), Expect = 4e-86
Identities = 85/263 (32%), Positives = 136/263 (51%), Gaps = 10/263 (3%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ +GR LG+G+FG YL E A K + K +L +RREI+I HL H
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NI+ + + D +++++E GEL+ + + G + E+++A + + CH
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYG 279
V+HRD+KPEN L+ LK DFG SV + T + G+ Y+ PE++ K +
Sbjct: 135 VIHRDIKPENLLM---GYKGELKIADFGWSVHAPSLRRRT-MCGTLDYLPPEMIEGKTHD 190
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339
+ D+W AGV+ Y L G+PPF + + ++ D + P+ +SD +KDLI K+
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--DLKFPPF--LSDGSKDLISKL 246
Query: 340 LCSQPSERLTAHEVLCHPWICEN 362
L P +RL V+ HPW+ N
Sbjct: 247 LRYHPPQRLPLKGVMEHPWVKAN 269
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 266 bits (682), Expect = 2e-85
Identities = 69/294 (23%), Positives = 114/294 (38%), Gaps = 41/294 (13%)
Query: 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL 156
+ LGQG FG +A K I + E + + E+ ++ L
Sbjct: 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASL 59
Query: 157 AGHKNIVTIKGAYED-------------SLCVHIVMELCAGGELFDRIIQRGHYSER-KA 202
H+ +V A+ + + I ME C G L+D I +R +
Sbjct: 60 N-HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118
Query: 203 AELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-------- 254
L R I+ + HS G++HRDLKP N + D+ ++K DFGL+
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 255 -------PGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAET 305
T +G+ YVA EVL HY + D+++ G+I + ++ P
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGME 233
Query: 306 QQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ I + I+F D K +IR ++ P++R A +L W+
Sbjct: 234 RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 261 bits (669), Expect = 3e-85
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 370 LDPAVLSRLKQFSAMNKLKKMALRVIAESLS--EEEIAGLKEMFKAMDTDNSGAITFDEL 427
+ P VL+ +K + + ++ + + ++A LS I + E+F +DT+++G+++ E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 428 KAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFD 487
L G +K +I ++ A D+++ G I Y EF+A +E L AAF D
Sbjct: 62 YTVLASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIE-STFLKAAFNKID 118
Query: 488 KDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDG--------RIDYGEFVAMMQK 539
KD GYI+ ++ + + + +++ V G +I + EF M
Sbjct: 119 KDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS 178
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 267 bits (685), Expect = 1e-84
Identities = 64/303 (21%), Positives = 114/303 (37%), Gaps = 43/303 (14%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
L+ L LGQG + TG FA K + + DV RE +++
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVLKK 63
Query: 156 LAGHKNIVTIKGAYEDSLCVHI--VMELCAGGELFDRIIQRGH---YSERKAAELTRIIV 210
L HKNIV + E++ H +ME C G L+ + + + E + + R +V
Sbjct: 64 LN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 211 GVVEACHSLGVMHRDLKPENFLL-VNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV 269
G + G++HR++KP N + + +D K DFG + + + F + G+ Y+
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYL 182
Query: 270 APEVL---------LKHYGPEADVWTAGVILYILLSGVPPFWA----ETQQGIFDAVLKG 316
P++ K YG D+W+ GV Y +G PF + + ++ G
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242
Query: 317 ---------------HIDFESD--PWPLISDSAKD----LIRKMLCSQPSERLTAHEVLC 355
ID+ D +S + ++ +L + + +
Sbjct: 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302
Query: 356 HPW 358
Sbjct: 303 ETS 305
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 260 bits (666), Expect = 2e-83
Identities = 95/261 (36%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y LG LG G FG + TG + A K ++++K+ S + V ++REIQ + H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HP 71
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
+I+ + +VME +GGELFD I + G E +A L + I+ V+ CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHY- 278
V+HRDLKPEN LL D + K DFGLS G+ GSP Y APEV+ + Y
Sbjct: 132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 188
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338
GPE D+W+ GVILY LL G PF E +F + G F + ++ S L+
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPEY--LNRSVATLLMH 244
Query: 339 MLCSQPSERLTAHEVLCHPWI 359
ML P +R T ++ H W
Sbjct: 245 MLQVDPLKRATIKDIREHEWF 265
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 260 bits (667), Expect = 7e-83
Identities = 99/307 (32%), Positives = 154/307 (50%), Gaps = 13/307 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y L + +G+G F L I TG E A K I K + ++ ++ + RE++IM L H
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILN-HP 74
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV + E ++++ME +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHY- 278
++HRDLK EN LL D D ++K DFG S F G G+P Y APE+ K Y
Sbjct: 135 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338
GPE DVW+ GVILY L+SG PF + + + + VL+G + + +S ++L+++
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG--KYRIPFY--MSTDCENLLKR 247
Query: 339 MLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMAL--RVIA 396
L P +R T +++ WI + + ++ + M I
Sbjct: 248 FLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDIMVGMGYSQEEIQ 307
Query: 397 ESLSEEE 403
ESLS+ +
Sbjct: 308 ESLSKMK 314
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 260 bits (666), Expect = 3e-82
Identities = 50/361 (13%), Positives = 90/361 (24%), Gaps = 48/361 (13%)
Query: 49 QLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLG 108
+ + + + + + + + +L L L
Sbjct: 16 KREEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERK----LKLVEPLR 71
Query: 109 QGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL------------ 156
G +L ++ +FA K + SR ++E + L
Sbjct: 72 VGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRR 131
Query: 157 -----------AGHKNIVTIKGAYED--SLCVHIVMELCAG------GELFDRIIQRGHY 197
+ +D ++M + L + RG
Sbjct: 132 RLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDE 191
Query: 198 SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257
LT ++ + S G++H P+N + D L D K G
Sbjct: 192 GILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI---MPDGRLMLGDVSALW--KVGT 246
Query: 258 IFTDVVGSPYYVAPEVLLKH---YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL 314
Y E L + + W G+ +Y + PF T
Sbjct: 247 RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKR 306
Query: 315 KGHIDFESDPWPL-----ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRS 369
+D + D K LI + L RL E + P + S
Sbjct: 307 PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSS 366
Query: 370 L 370
L
Sbjct: 367 L 367
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 256 bits (657), Expect = 4e-81
Identities = 70/331 (21%), Positives = 135/331 (40%), Gaps = 33/331 (9%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
R Y++ +++G G + +A K ++ + + ++ R EI ++
Sbjct: 7 KGRI-YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNK 63
Query: 156 LAGH-KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
L H I+ + +++VME C +L + ++ + + ++ V
Sbjct: 64 LQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 122
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAP 271
H G++H DLKP NFL+V+ LK IDFG++ +P + VG+ Y+ P
Sbjct: 123 TIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
Query: 272 EVLL------------KHYGPEADVWTAGVILYILLSGVPPFWAETQQ-GIFDAVLKGHI 318
E + P++DVW+ G ILY + G PF Q A++ +
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 238
Query: 319 DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPA----- 373
+ E + +D+++ L P +R++ E+L HP++ ++
Sbjct: 239 EIEF--PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMK 296
Query: 374 -VLSRLKQFSAMNKLKKMALRVIAESLSEEE 403
VL +L ++ N + K A + E
Sbjct: 297 YVLGQLVGLNSPNSILKAAKTLYEHYSGGES 327
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 254 bits (652), Expect = 9e-81
Identities = 62/290 (21%), Positives = 120/290 (41%), Gaps = 24/290 (8%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH- 159
Y++ +++G G + +A K ++ + + ++ R EI ++ L H
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 87
Query: 160 KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL 219
I+ + +++VME C +L + ++ + + ++ V H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLL- 275
G++H DLKP NFL+V+ LK IDFG++ +P + VG+ Y+ PE +
Sbjct: 147 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 276 -----------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP 324
P++DVW+ G ILY + G PF Q I + E +
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-ISKLHAIIDPNHEIEF 261
Query: 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAV 374
+ +D+++ L P +R++ E+L HP++ ++
Sbjct: 262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTT 311
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 250 bits (640), Expect = 1e-80
Identities = 120/167 (71%), Positives = 144/167 (86%), Gaps = 4/167 (2%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNS 455
AE LSEEEI GLKE+FK +DTDNSG ITFDELK GL+R GS L ++EI+DLMDAAD+D S
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 456 GTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLED 515
GTIDYGEFIAATVHLNKLEREE+LV+AF YFDKDGSGYIT+DE+QQAC + + D+ ++D
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD 120
Query: 516 IIREVDQDNDGRIDYGEFVAMMQKG--NVGLGRRTMRNSLNMSMRDA 560
+I+E+DQDNDG+IDYGEF AMM+K N G+GRRTMR +LN +RDA
Sbjct: 121 MIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLN--LRDA 165
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 1e-21
Identities = 35/127 (27%), Positives = 48/127 (37%), Gaps = 21/127 (16%)
Query: 382 SAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT 441
+A L K+ EE L F D D SG IT DE++ + +G L D
Sbjct: 70 AATVHLNKL--------EREEN---LVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDI 116
Query: 442 EIRDLMDAADVDNSGTIDYGEFIA--------ATVHLNKLEREEHLVAAFQYFDKDGSGY 493
I D++ D DN G IDYGEF A + + + +L A D +
Sbjct: 117 HIDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQV 176
Query: 494 ITVDELQ 500
I
Sbjct: 177 IEGYFKH 183
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 256 bits (656), Expect = 1e-80
Identities = 43/325 (13%), Positives = 87/325 (26%), Gaps = 66/325 (20%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA--- 157
G LGQ T+ TG F + ++ ++ E+ + L
Sbjct: 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 134
Query: 158 ---------------------GHKNIVTIKGAYED--SLCVHIVMELCA------GGELF 188
K ++ ++ D L + G L
Sbjct: 135 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 194
Query: 189 DRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248
+LT ++ ++ + H G++H L+P + +L D + F
Sbjct: 195 SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVFLTGFE 251
Query: 249 LSVFFKPGQIFTDVVGSPYYVAPEVLL------------KHYGPEADVWTAGVILYILLS 296
V S + PE+ D W G+++Y +
Sbjct: 252 HLV---RDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308
Query: 297 GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356
P + G + + + + I + L+ L +RL + +
Sbjct: 309 ADLPITKDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRYPKEDRLLPLQAMET 360
Query: 357 PWICENGVAPDRSLDPAVLSRLKQF 381
P L + + L +
Sbjct: 361 PEY--------EQLRTELSAALPLY 377
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 256 bits (655), Expect = 2e-80
Identities = 78/403 (19%), Positives = 152/403 (37%), Gaps = 53/403 (13%)
Query: 22 DHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRG 81
H ++S + + Q + S + ++ K +S S + I +G
Sbjct: 2 HHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASS------SANECISVKG 55
Query: 82 IDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE 141
Y++ +++G G + +A K ++ + +
Sbjct: 56 RI-----------------YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEA-DNQ 96
Query: 142 DVEDVRREIQIMHHLAGH-KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSER 200
++ R EI ++ L H I+ + +++VME C +L + ++
Sbjct: 97 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 155
Query: 201 KAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ--- 257
+ + ++ V H G++H DLKP NFL+V+ LK IDFG++ +P
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSV 211
Query: 258 IFTDVVGSPYYVAPEVLL------------KHYGPEADVWTAGVILYILLSGVPPFWAET 305
+ VG+ Y+ PE + P++DVW+ G ILY + G PF
Sbjct: 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
Query: 306 QQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365
Q I + E + + +D+++ L P +R++ E+L HP++
Sbjct: 272 NQ-ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 330
Query: 366 PDRSLDPA------VLSRLKQFSAMNKLKKMALRVIAESLSEE 402
++ VL +L ++ N + K A + E
Sbjct: 331 VNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGE 373
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 254 bits (651), Expect = 3e-80
Identities = 66/354 (18%), Positives = 133/354 (37%), Gaps = 50/354 (14%)
Query: 71 PSKKDNIMRRGIDNQTYYVLGHKTDNIR-DLYTLGRKLGQGQFGTTYLCTEIATGIEFAC 129
P + N Y K + + Y + R L QG+F LC + +A
Sbjct: 2 PLGSMKDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYAL 59
Query: 130 KSISKRKLI--------------SREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175
K K L + +D + E+QI+ + ++ +T +G + V
Sbjct: 60 KKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEYCLTCEGIITNYDEV 118
Query: 176 HIVMELCAGGELFDRIIQRGH--------YSERKAAELTRIIVGVVEACHS-LGVMHRDL 226
+I+ E + + + + ++ H+ + HRD+
Sbjct: 119 YIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDV 178
Query: 227 KPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL---LKHYGPEAD 283
KP N L+ D + +K DFG S + +I G+ ++ PE + G + D
Sbjct: 179 KPSNILM---DKNGRVKLSDFGESEYMVDKKIKG-SRGTYEFMPPEFFSNESSYNGAKVD 234
Query: 284 VWTAGVILYILLSGVPPFWAE-TQQGIFDAVLKGHIDF---------------ESDPWPL 327
+W+ G+ LY++ V PF + + +F+ + +I++ +
Sbjct: 235 IWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNF 294
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQF 381
+S+ D ++ L P+ER+T+ + L H W+ + + R + + K+
Sbjct: 295 LSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFSKELYKKRKKL 348
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 258 bits (661), Expect = 5e-80
Identities = 96/274 (35%), Positives = 141/274 (51%), Gaps = 10/274 (3%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y LG LG G FG + TG + A K ++++K+ S + V +RREIQ + H
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HP 76
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
+I+ + + +VME +GGELFD I + G E+++ L + I+ V+ CH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHY- 278
V+HRDLKPEN LL D + K DFGLS G+ GSP Y APEV+ + Y
Sbjct: 137 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 193
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338
GPE D+W++GVILY LL G PF + +F + G F + + ++ S L++
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--IFYTPQY--LNPSVISLLKH 249
Query: 339 MLCSQPSERLTAHEVLCHPWICENGVAPDRSLDP 372
ML P +R T ++ H W ++ DP
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDP 283
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 253 bits (649), Expect = 5e-80
Identities = 101/307 (32%), Positives = 152/307 (49%), Gaps = 13/307 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + LG+G FG L T T + A K IS++ L + V REI + L H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HP 69
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
+I+ + + +V+E AGGELFD I+++ +E + + I+ +E CH
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHY- 278
++HRDLKPEN LL DD+ ++K DFGLS G GSP Y APEV+ K Y
Sbjct: 129 IVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338
GPE DVW+ G++LY++L G PF E +F V + + +S A+ LIR+
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSC--VYVMPDF--LSPGAQSLIRR 241
Query: 339 MLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRL--KQFSAMNKLKKMALRVIA 396
M+ + P +R+T E+ PW N R ++ S + S + + + I
Sbjct: 242 MIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDYIV 301
Query: 397 ESLSEEE 403
E+L +E
Sbjct: 302 EALRSDE 308
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
Score = 248 bits (635), Expect = 7e-80
Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 23/211 (10%)
Query: 362 NGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGA 421
+G+ P L + + M KL+ L A I GL F+ +D D S +
Sbjct: 2 SGLVPRGPLGSHMD---AVDATMEKLRAQCLSRGAS-----GIQGLARFFRQLDRDGSRS 53
Query: 422 ITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVA 481
+ DE + GL + G L E + D + SGT+D EF+ A RE + A
Sbjct: 54 LDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAA 113
Query: 482 AFQYFDKDGSGYITVDELQQACAE---------HNMTDVLLEDIIREVD-QDNDGRIDYG 531
AF D+ G G +TVD+L+ + D +L + D + DG++
Sbjct: 114 AFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLA 173
Query: 532 EFVAMMQKGNVGLGR-----RTMRNSLNMSM 557
EF + + M ++ + +
Sbjct: 174 EFQDYYSGVSASMNTDEEFVAMMTSAWQLKL 204
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 251 bits (643), Expect = 2e-79
Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 24/296 (8%)
Query: 91 GHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED---VR 147
G + Y LG LG+G FGT + + ++ A K I + +++ + D
Sbjct: 23 GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCP 82
Query: 148 REIQIM---HHLAGHKNIVTIKGAYEDSLCVHIVMEL-CAGGELFDRIIQRGHYSERKAA 203
E+ ++ GH ++ + +E +V+E +LFD I ++G E +
Sbjct: 83 LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSR 142
Query: 204 ELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV 263
+V ++ CHS GV+HRD+K EN +L++ K IDFG +TD
Sbjct: 143 CFFGQVVAAIQHCHSRGVVHRDIKDEN-ILIDL-RRGCAKLIDFGSGALLHDEP-YTDFD 199
Query: 264 GSPYYVAPEVLL-KHY-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE 321
G+ Y PE + Y A VW+ G++LY ++ G PF E Q I +A +
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF--ERDQEILEA------ELH 251
Query: 322 SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSR 377
+S LIR+ L +PS R + E+L PW+ A D L+P+
Sbjct: 252 FPAH--VSPDCCALIRRCLAPKPSSRPSLEEILLDPWM--QTPAEDVPLNPSKGGP 303
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 252 bits (645), Expect = 2e-79
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 22/280 (7%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED-----VRREIQIMHH 155
Y+ LG G FG + + E K I K K++ +ED V EI I+
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 156 LAGHKNIVTIKGAYEDSLCVHIVMEL-CAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
+ H NI+ + +E+ +VME +G +LF I + E A+ + R +V V
Sbjct: 86 VE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL 274
++HRD+K EN ++ +DF++K IDFG + + + G++F G+ Y APEVL
Sbjct: 145 YLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVL 201
Query: 275 L-KHY-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332
+ Y GPE ++W+ GV LY L+ PF + ++ +S
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPFCE------LEETVEA--AIHPPYL--VSKEL 251
Query: 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDP 372
L+ +L P R T +++ PW+ + D + +
Sbjct: 252 MSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEE 291
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 249 bits (638), Expect = 4e-79
Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 14/265 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ L + LG+G +G L T A K + ++ + + E++++EI I L H+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN-HE 65
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
N+V G + ++ +E C+GGELFDRI E A ++ V H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLL-K 276
+ HRD+KPEN LL D+ +LK DFGL+ F+ + + G+ YVAPE+L +
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 277 HY-GPEADVWTAGVILYILLSGVPPF-WAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334
+ DVW+ G++L +L+G P+ + + +PW I +
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDSAPLA 240
Query: 335 LIRKMLCSQPSERLTAHEVLCHPWI 359
L+ K+L PS R+T ++ W
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 261 bits (667), Expect = 6e-79
Identities = 66/292 (22%), Positives = 111/292 (38%), Gaps = 33/292 (11%)
Query: 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL 156
+ + +LG G FG TG + A K + S ++ E EIQIM L
Sbjct: 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKL 69
Query: 157 AGHKNIVTIKGAYEDSLCVH------IVMELCAGGELFDRIIQRGH---YSERKAAELTR 207
H N+V+ + + + + ME C GG+L + Q + E L
Sbjct: 70 N-HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 208 IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY 267
I + H ++HRDLKPEN +L K ID G + G++ T+ VG+
Sbjct: 129 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQ 188
Query: 268 YVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW- 325
Y+APE+L K Y D W+ G + + ++G PF Q + ++ + +
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248
Query: 326 -------------------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
+++ + ++ ML +R T +
Sbjct: 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGC 300
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 250 bits (640), Expect = 7e-79
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 20/286 (6%)
Query: 91 GHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED---VR 147
G + + + Y +G LG G FG+ Y ++ + A K + K ++ ++ + V
Sbjct: 35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 148 REIQIMHHLA-GHKNIVTIKGAYEDSLCVHIVMELCAG-GELFDRIIQRGHYSERKAAEL 205
E+ ++ ++ G ++ + +E +++E +LFD I +RG E A
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 206 TRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGS 265
++ V CH+ GV+HRD+K EN +L++ + LK IDFG K +TD G+
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDEN-ILIDL-NRGELKLIDFGSGALLKDTV-YTDFDGT 211
Query: 266 PYYVAPEVLL-KHY-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD 323
Y PE + Y G A VW+ G++LY ++ G PF E + I
Sbjct: 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRG------QVFFR 263
Query: 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRS 369
+S + LIR L +PS+R T E+ HPW+ + + + +
Sbjct: 264 QR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETA 307
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 248 bits (635), Expect = 2e-78
Identities = 86/291 (29%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI---------------------- 138
YTL ++G+G +G L +A K +SK+KLI
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 139 -SREDVEDVRREIQIMHHLAGHKNIVT----IKGAYEDSLCVHIVMELCAGGELFDRIIQ 193
R +E V +EI I+ L H N+V + ED L ++V EL G + + +
Sbjct: 75 QPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHL--YMVFELVNQGPVME-VPT 130
Query: 194 RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253
SE +A + ++ +E H ++HRD+KP N L+ +D +K DFG+S F
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV---GEDGHIKIADFGVSNEF 187
Query: 254 KPGQIFTD-VVGSPYYVAPEVL---LKHY-GPEADVWTAGVILYILLSGVPPFWAETQQG 308
K VG+P ++APE L K + G DVW GV LY + G PF E
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ + E P I++ KDLI +ML P R+ E+ HPW+
Sbjct: 248 LHSKIKSQ--ALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 248 bits (636), Expect = 3e-78
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ L + LG+G +G L T A K + ++ + + E++++EI I L H+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN-HE 65
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
N+V G + ++ +E C+GGELFDRI E A ++ V H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD---VVGSPYYVAPEVLL-K 276
+ HRD+KPEN LL D+ +LK DFGL+ F+ + G+ YVAPE+L +
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 277 HY-GPEADVWTAGVILYILLSGVPPF--WAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333
+ DVW+ G++L +L+G P+ +++ Q D K +PW I +
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK---TYLNPWKKIDSAPL 239
Query: 334 DLIRKMLCSQPSERLTAHEVLCHPWICEN 362
L+ K+L PS R+T ++ W +
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKP 268
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 246 bits (631), Expect = 5e-77
Identities = 89/268 (33%), Positives = 126/268 (47%), Gaps = 14/268 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + +G G FG L + T A K I + I E+V+REI L H
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSLR-HP 76
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV K + I+ME +GGEL++RI G +SE +A + ++ V CHS+
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHY- 278
+ HRDLK EN L++ LK DFG S VG+P Y+APEVLL + Y
Sbjct: 137 ICHRDLKLEN-TLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYD 195
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQQGIF----DAVLKGHIDFESDPWPLISDSAKD 334
G ADVW+ GV LY++L G PF + + +L D IS
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR--ISPECCH 253
Query: 335 LIRKMLCSQPSERLTAHEVLCHPWICEN 362
LI ++ + P+ R++ E+ H W +N
Sbjct: 254 LISRIFVADPATRISIPEIKTHSWFLKN 281
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 239 bits (611), Expect = 1e-74
Identities = 44/246 (17%), Positives = 86/246 (34%), Gaps = 20/246 (8%)
Query: 303 AETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR------KMLCSQPSERLTAHEVLCH 356
E Q D H + I+ ++ + + ++ R A
Sbjct: 21 LEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREA 80
Query: 357 PWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDT 416
+ A + L + S N+L R LSEE+ L+++F +
Sbjct: 81 AR--GDAAAEKQRLASLLKDLEDDASGYNRL-----RPSKPMLSEEDTNILRQLFLSSAV 133
Query: 417 DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476
SG +F +LK L +Y T+ + ++ L + D G + Y +A L L
Sbjct: 134 SGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALV-- 191
Query: 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDV-LLEDIIREVDQDNDGRIDYGEFVA 535
A F+ D + +G ++ E ++ + + + R D+D + + E+V
Sbjct: 192 ----ADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVH 247
Query: 536 MMQKGN 541
+
Sbjct: 248 LGLCLL 253
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 9e-13
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
L+ ++ D D SG ++ +E++ L + DVD+S ++ Y EF+
Sbjct: 255 LRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314
Query: 466 ATVHLNKLE 474
+ + +
Sbjct: 315 LVLLMFHDD 323
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 1e-07
Identities = 22/187 (11%), Positives = 48/187 (25%), Gaps = 39/187 (20%)
Query: 377 RLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGS 436
+L S +K + L +E+ A L E + + + + + R +
Sbjct: 27 KLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAERERE-AARGDA 85
Query: 437 TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITV 496
+ + L+ + D SG L++ + L F G
Sbjct: 86 AAEKQRLASLLKDLEDDASGYNRLRPSKP---MLSEEDTNI-LRQLFLSSAVSG------ 135
Query: 497 DELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMS 556
G+ + + ++ K + ++ M
Sbjct: 136 ----------------------------SGKFSFQDLKQVLAKYADTIPEGPLKKLFVMV 167
Query: 557 MRDAPGS 563
D G
Sbjct: 168 ENDTKGR 174
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 233 bits (597), Expect = 4e-73
Identities = 73/277 (26%), Positives = 126/277 (45%), Gaps = 21/277 (7%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
+ Y + +G G +G + G K + + + + + + E+ ++ L
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK- 63
Query: 159 HKNIVTIKGAYED--SLCVHIVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGV 212
H NIV D + ++IVME C GG+L I + R + E + +
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 213 VEACHSLG-----VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-VVGSP 266
++ CH V+HRDLKP N L D ++K DFGL+ F VG+P
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKTFVGTP 180
Query: 267 YYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW 325
YY++PE + Y ++D+W+ G +LY L + +PPF A +Q+ + + +G +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY 240
Query: 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362
SD ++I +ML + R + E+L +P I E+
Sbjct: 241 ---SDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 1e-72
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 20/270 (7%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED-VRREIQIMHHLAGH 159
Y +G LG+G +G + T A K + K+KL + E V++EIQ++ L H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-H 65
Query: 160 KNIVTIKG--AYEDSLCVHIVMELCAGG--ELFDRIIQRGHYSERKAAELTRIIVGVVEA 215
KN++ + E+ +++VME C G E+ D + + + +A ++ +E
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE-KRFPVCQAHGYFCQLIDGLEY 124
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF---FKPGQIFTDVVGSPYYVAPE 272
HS G++H+D+KP N LL +LK G++ F GSP + PE
Sbjct: 125 LHSQGIVHKDIKPGNLLL---TTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 273 VL--LKHY-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329
+ L + G + D+W+AGV LY + +G+ PF + +F+ + KG +
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SYAIPGD--CG 237
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
DL++ ML +P++R + ++ H W
Sbjct: 238 PPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 2e-72
Identities = 69/321 (21%), Positives = 119/321 (37%), Gaps = 23/321 (7%)
Query: 41 STPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDL 100
S L ++ L Q + P++ + S + + + ++++ +
Sbjct: 9 SGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQ-SPGYDPSRPESFF---------QQS 58
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ +LG G +G + G +A K S +D E+ + H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK-RSMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHY-SERKAAELTRIIVGVVEACHSL 219
V ++ A+E+ +++ ELC G L G E + R + + HS
Sbjct: 118 CCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYG 279
G++H D+KP N L K DFGL V G P Y+APE+L YG
Sbjct: 177 GLVHLDVKPANIFL---GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYG 233
Query: 280 PEADVWTAGVILYILLSGVP-PFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338
ADV++ G+ + + + P E Q + L +S + ++
Sbjct: 234 TAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEF------TAGLSSELRSVLVM 287
Query: 339 MLCSQPSERLTAHEVLCHPWI 359
ML P R TA +L P +
Sbjct: 288 MLEPDPKLRATAEALLALPVL 308
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 229 bits (585), Expect = 2e-70
Identities = 67/269 (24%), Positives = 133/269 (49%), Gaps = 14/269 (5%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
+ Y +K+G+G FG L G ++ K I+ ++ S ++ E+ RRE+ ++ ++
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMK- 81
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEAC 216
H NIV + ++E++ ++IVM+ C GG+LF RI + + E + + I ++
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-VVGSPYYVAPEVLL 275
H ++HRD+K +N L D +++ DFG++ +G+PYY++PE+
Sbjct: 142 HDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICE 198
Query: 276 -KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP-LISDSAK 333
K Y ++D+W G +LY L + F A + + + ++ G P S +
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF----PPVSLHYSYDLR 254
Query: 334 DLIRKMLCSQPSERLTAHEVLCHPWICEN 362
L+ ++ P +R + + +L +I +
Sbjct: 255 SLVSQLFKRNPRDRPSVNSILEKGFIAKR 283
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 216 bits (553), Expect = 4e-68
Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Query: 376 SRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG 435
+ K + + +K L+EE+ ++E F DTD SG I ELK +R G
Sbjct: 3 YKAKTVVSARRDQKKG----RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALG 58
Query: 436 STLKDTEIRDLMDAADVDNSGTIDYGEFIA-ATVHLNKLEREEHLVAAFQYFDKDGSGYI 494
K EI+ ++ D D SGTID+ EF+ T + + + E ++ AF+ FD D SG I
Sbjct: 59 FEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTI 118
Query: 495 TVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV 542
T+ +L++ E N+T+ L+++I E D+++D ID EF+ +M+K ++
Sbjct: 119 TIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 215 bits (550), Expect = 5e-67
Identities = 38/197 (19%), Positives = 77/197 (39%), Gaps = 17/197 (8%)
Query: 363 GVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAG----LKEMFKAMDTDN 418
G + + K +K A I +++ E+ A E+FK D +
Sbjct: 2 GACGSKGSTSDKGLASDKDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNE 61
Query: 419 SGAITFDELKAGLRR-YGSTLKDTEIRDLMDAA---------DVDNSGTIDYGEFIAATV 468
+G + +DE+ +G + +RD+ A ++N G+ D+ EF+ +
Sbjct: 62 TGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRL 121
Query: 469 HLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLED---IIREVDQDND 525
L + L F D G+ + +E ++A + +ED + +E+D++
Sbjct: 122 MLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGT 181
Query: 526 GRIDYGEFVAMMQKGNV 542
G + + EF A +
Sbjct: 182 GSVTFDEFAAWASAVKL 198
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 211 bits (540), Expect = 2e-66
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 4/160 (2%)
Query: 384 MNKLKK-MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE 442
M+K + + + L EE+ + E F D +N G + + ELK ++ G L E
Sbjct: 1 MSKNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE 60
Query: 443 IRDLMDAADVDNSGTIDYGEFIA-ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQ 501
I DL+D D + + Y +F + K + + + AFQ FD D +G I++ L++
Sbjct: 61 ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRR 120
Query: 502 ACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
E +TD L +I E D D DG I+ EF+A+
Sbjct: 121 VAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 215 bits (550), Expect = 1e-65
Identities = 63/284 (22%), Positives = 104/284 (36%), Gaps = 30/284 (10%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y +KLG+G F L + G +A K I ++D E+ +RE + H
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLF-NHP 86
Query: 161 NIVTIKGAYEDSL----CVHIVMELCAGGELFDRIIQR----GHYSERKAAELTRIIVGV 212
NI+ + +++ G L++ I + +E + L I
Sbjct: 87 NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG----------QIFTDV 262
+EA H+ G HRDLKP N LL D+ +D G Q +
Sbjct: 147 LEAIHAKGYAHRDLKPTNILL---GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 263 VGSPYYVAPEVL-LKHY---GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI 318
+ Y APE+ ++ + DVW+ G +LY ++ G P+ Q+G L
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-VALAVQN 262
Query: 319 DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362
P S + L+ M+ P +R +L +
Sbjct: 263 QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 212 bits (543), Expect = 5e-65
Identities = 73/293 (24%), Positives = 110/293 (37%), Gaps = 40/293 (13%)
Query: 91 GHKTDNIRDL--YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR 148
G T + R + +G G FG + G + K + E R
Sbjct: 1 GAHTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAER 53
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSL----------------CVHIVMELCAGGELFDRII 192
E++ + L H NIV G ++ C+ I ME C G L I
Sbjct: 54 EVKALAKLD-HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 112
Query: 193 QR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250
+R + A EL I V+ HS +++RDLKP N L D +K DFGL
Sbjct: 113 KRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL---VDTKQVKIGDFGLV 169
Query: 251 VFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGI 309
K T G+ Y++PE + + YG E D++ G+IL LL
Sbjct: 170 TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA--FETSKF 227
Query: 310 FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362
F + G I + K L++K+L +P +R E+L + +
Sbjct: 228 FTDLRDGIIS------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 208 bits (531), Expect = 5e-65
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 384 MNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTD-NSGAITFDELKAGLRRYGSTLKDTE 442
M+ + K E L+EE+ K F G+I+ EL +R G E
Sbjct: 1 MDDIYK----AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE 56
Query: 443 IRDLMDAADVDNSGTIDYGEFIAATVHL----NKLEREEHLVAAFQYFDKDGSGYITVDE 498
+++++D D D SGT+D+ EF+ V +K + EE L F+ FDK+ GYI ++E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 499 LQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
L+ +T+ +E+++++ D++NDGRIDY EF+ M+
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 4e-14
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 465 AATVHLNKLEREEHLVAAFQYFDKDG-SGYITVDELQQACAE--HNMTDVLLEDIIREVD 521
AA L + ++ E AAF F G I+ EL + N T L+++I EVD
Sbjct: 7 AAVEQLTEEQKNE-FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 522 QDNDGRIDYGEFVAMMQK 539
+D G +D+ EF+ MM +
Sbjct: 66 EDGSGTVDFDEFLVMMVR 83
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 9e-65
Identities = 60/167 (35%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Query: 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDN 454
+A+ L+EE+IA KE F D D G IT EL +R G + E++D+++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 455 SGTIDYGEFIA-ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDV 511
+GTID+ EF+ + + EE + AF+ FDKDG+GYI+ EL+ +TD
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 512 LLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMR 558
++++IRE D D DG+++Y EFV MM G G + + +R
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEVIRNKIR 167
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 3e-27
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA 449
M R + ++ SEEE ++E F+ D D +G I+ EL+ + G L D E+ +++
Sbjct: 72 MMARKMKDTDSEEE---IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 450 ADVDNSGTIDYGEFIAA----TVHLNKLEREEHLVAAFQYFDKDGSGYITV 496
AD+D G ++Y EF+ R+E + + K + +
Sbjct: 129 ADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEVIRNKIRAIGKMARVFSVL 179
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 206 bits (528), Expect = 1e-64
Identities = 45/143 (31%), Positives = 82/143 (57%), Gaps = 3/143 (2%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTID 459
+EE+ ++E F D D +G I ELK +R G K EI+ ++ D + +G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 460 YGEFIA-ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDI 516
+G+F+ T +++ + +E ++ AF+ FD D +G I+ L++ E N+TD L+++
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 517 IREVDQDNDGRIDYGEFVAMMQK 539
I E D+D DG + EF+ +M+K
Sbjct: 121 IDEADRDGDGEVSEQEFLRIMKK 143
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 207 bits (528), Expect = 2e-64
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 396 AESLSEEEIAGLKEMFKAMDT-DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDN 454
LS ++ L+ F+ +T + SG ++ D++ L G + IR L+D D
Sbjct: 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63
Query: 455 SGTIDYGEFIAATV-----HLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HN 507
+G ID+ F +N + ++ L AF+ +DK+G+GYI+ D +++ AE
Sbjct: 64 NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDET 123
Query: 508 MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541
++ L+ +I E+D D G +D+ EF+ +M G+
Sbjct: 124 LSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGGD 157
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 5e-16
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA 449
A + E E+ L+E F+ D + +G I+ D ++ L TL ++ ++D
Sbjct: 76 GARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDE 135
Query: 450 ADVDNSGTIDYGEFIA 465
D D SGT+D+ EF+
Sbjct: 136 IDADGSGTVDFEEFMG 151
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 205 bits (525), Expect = 4e-64
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 382 SAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT 441
++M + A LSEE IA K F D D G I+ EL +R G
Sbjct: 1 ASMTDQQAEA----RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE 56
Query: 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLE----REEHLVAAFQYFDKDGSGYITVD 497
E+ +++ D D SGTID+ EF+ V K + EE L F+ FDK+ G+I ++
Sbjct: 57 ELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIE 116
Query: 498 ELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
EL + ++T+ +ED++++ D++NDGRID+ EF+ MM+
Sbjct: 117 ELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 7e-16
Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 465 AATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQ 522
A L++ E AAF FD DG G I+ EL N T L+ II EVD+
Sbjct: 9 EARAFLSEEMIAE-FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDE 67
Query: 523 DNDGRIDYGEFVAMMQK 539
D G ID+ EF+ MM +
Sbjct: 68 DGSGTIDFEEFLVMMVR 84
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 5e-64
Identities = 53/148 (35%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Query: 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDN 454
++++L+EE+IA KE F D DNSG+I+ EL +R G + + E+ DLM+ DVD
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 455 SGTIDYGEFIA-ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDV 511
+ I++ EF+A + L + E+ L+ AF+ FDK+G G I+ EL+ +TD
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 512 LLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+++++REV D G I+ +F A++ K
Sbjct: 121 EVDEMLREVS-DGSGEINIKQFAALLSK 147
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 1e-63
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDN 454
+ SL EEI L+E F+ D D G I +L +R G + E+ +L +++
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 455 SGTIDYGEFIAATVHLNKLE-----REEHLVAAFQYFDKDGSGYITVDELQQACAE---H 506
G +D+ +F+ E + L AF+ FD +G G I+ EL++A H
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGH 120
Query: 507 NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ +E+IIR+VD + DGR+D+ EFV MM +
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 1e-14
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 388 KKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY-GSTLKDTEIRDL 446
K+ A+ + +E L++ F+ DT+ G I+ EL+ +R G + +I ++
Sbjct: 75 PKLLAET-ADMIGVKE---LRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEI 130
Query: 447 MDAADVDNSGTIDYGEFIA 465
+ D++ G +D+ EF+
Sbjct: 131 IRDVDLNGDGRVDFEEFVR 149
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 212 bits (540), Expect = 3e-63
Identities = 41/299 (13%), Positives = 81/299 (27%), Gaps = 51/299 (17%)
Query: 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA-- 157
G LGQ T+ TG F + ++ ++ E+ + L
Sbjct: 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 138
Query: 158 ----------------------GHKNIVTIKGAYED--SLCVHIVMELCAG------GEL 187
K ++ ++ D L + L
Sbjct: 139 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 198
Query: 188 FDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247
+LT ++ ++ + H G++H L+P + +L D + F
Sbjct: 199 LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVFLTGF 255
Query: 248 GLSVFFKPGQIF--TDVVGSPYYVAPEVLLKH------YGPEADVWTAGVILYILLSGVP 299
V + P A +L D WT G+ +Y +
Sbjct: 256 EHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315
Query: 300 PFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
P + G + + + + I + L+ L +RL + + P
Sbjct: 316 PNTDDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRYPKEDRLLPLQAMETPE 366
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 9e-63
Identities = 26/183 (14%), Positives = 61/183 (33%), Gaps = 7/183 (3%)
Query: 356 HPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMD 415
P + + + + + + + ++ + ++ ++ + + F +D
Sbjct: 2 QPPVANFCLWNLQPIQGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVD 61
Query: 416 TDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475
D SG + +EL G G L +M D D +G I + EF+A +
Sbjct: 62 RDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFMELAY- 120
Query: 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHNMT-DVLLEDIIREVDQDNDGRIDYGEFV 534
F + SG + E+ A + + ++ + D ++
Sbjct: 121 -----NLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFARGMAFCDLNCWI 175
Query: 535 AMM 537
A+
Sbjct: 176 AIC 178
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 1e-13
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYG 531
++ + F D+D SG + ++EL ++ ++R D D +G I +
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 532 EFVAMMQK 539
EF+AM +
Sbjct: 108 EFMAMYKF 115
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 1e-62
Identities = 30/134 (22%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 466
+ +FK +D + GA++++E+KA + + + + ++ + + D D +G ID EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 467 TVHLNK---LEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQD 523
+ + + L ++ D DG G +T +E+ +H + V + + + D +
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKV--AEQVMKADAN 119
Query: 524 NDGRIDYGEFVAMM 537
DG I EF+
Sbjct: 120 GDGYITLEEFLEFS 133
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 202 bits (515), Expect = 3e-62
Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 23/175 (13%)
Query: 388 KKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAG-----LRRYGSTLKDTE 442
K A+++ + + I K MF +D + +G IT DE+ + + +T + T+
Sbjct: 3 SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62
Query: 443 IRDLMDAADVDNSGT-----IDYGEFIA-----ATVHLNKLEREEH------LVAAFQYF 486
+ A G I + +F+ AT L K R E A F F
Sbjct: 63 RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122
Query: 487 DKDGSGYITVDELQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
DKDGSG IT+DE + + + E R D DN G +D E
Sbjct: 123 DKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG 177
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 2e-16
Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 362 NGVAPDRSLDPAVLSRLKQF-SAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSG 420
G+ + + QF +L L+ A + +F D D SG
Sbjct: 75 CGMEYGKEIA------FPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSG 128
Query: 421 AITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
IT DE KA + G + + D+DN+G +D E
Sbjct: 129 TITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTR 173
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 203 bits (518), Expect = 5e-61
Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 26/272 (9%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ G+ LG+G F T L E+AT E+A K + KR +I V V RE +M L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEAC 216
V + ++D ++ + GEL I + G + E AE IV +E
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE----IVSALEYL 146
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS--VFFKPGQIFTD-VVGSPYYVAPEV 273
H G++HRDLKPEN LL ++D ++ DFG + + + Q + VG+ YV+PE+
Sbjct: 147 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 203
Query: 274 LL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332
L K +D+W G I+Y L++G+PPF A + IF ++K DF P A
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF---P-EKFFPKA 259
Query: 333 KDLIRKMLCSQPSERLT------AHEVLCHPW 358
+DL+ K+L ++RL + HP+
Sbjct: 260 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 6e-61
Identities = 70/304 (23%), Positives = 111/304 (36%), Gaps = 50/304 (16%)
Query: 85 QTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE 144
QT + + + R L +G F Y ++ +G E+A K + E
Sbjct: 21 QTVELGELR-------LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNR 70
Query: 145 DVRREIQIMHHLAGHKNIVTIKGAYEDSLC--------VHIVMELCAGGELFDRIIQR-- 194
+ +E+ M L+GH NIV A ++ ELC G+L + + +
Sbjct: 71 AIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMES 129
Query: 195 -GHYSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251
G S ++ V+ H ++HRDLK EN LL + ++K DFG +
Sbjct: 130 RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKLCDFGSAT 186
Query: 252 FFKPGQIFTD-------------VVGSPYYVAPEVLL----KHYGPEADVWTAGVILYIL 294
++ +P Y PE++ G + D+W G ILY+L
Sbjct: 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLL 246
Query: 295 LSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL 354
PF + ++ G P LIR ML P ERL+ EV+
Sbjct: 247 CFRQHPFEDGAKL----RIVNGKYSIP--PHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
Query: 355 CHPW 358
Sbjct: 301 HQLQ 304
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 202 bits (516), Expect = 8e-61
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 14/267 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + +K+G+GQF Y + G+ A K + L+ + D +EI ++ L H
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HP 92
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRG----HYSERKAAELTRIIVGVVEAC 216
N++ ++ + ++IV+EL G+L I ER + + +E
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF-TDVVGSPYYVAPEVL- 274
HS VMHRD+KP N + +K D GL FF +VG+PYY++PE +
Sbjct: 153 HSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 275 LKHYGPEADVWTAGVILYILLSGVPPFWAETQ--QGIFDAVLKGHIDFESDPWPLISDSA 332
Y ++D+W+ G +LY + + PF+ + + + + D+ P S+
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC--DYPPLPSDHYSEEL 267
Query: 333 KDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ L+ + P +R V
Sbjct: 268 RQLVNMCINPDPEKRPDVTYVYDVAKR 294
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 201 bits (512), Expect = 2e-60
Identities = 69/299 (23%), Positives = 112/299 (37%), Gaps = 41/299 (13%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + LG+G FG + +A K I E V RE++ + L H
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLE-HP 63
Query: 161 NIVTIKGAYED------------SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI 208
IV A+ + + ++I M+LC L D + R ER+ + I
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 209 IVGVVEA---CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-------------VF 252
+ + EA HS G+MHRDLKP N D +K DFGL
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 253 FKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFD 311
T VG+ Y++PE + Y + D+++ G+IL+ LL P +
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL--YPFSTQMERVRTLT 238
Query: 312 AVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSL 370
V + +++ ML P ER A ++ + E+ P +++
Sbjct: 239 DVRNLKF---PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVF-EDLDFPGKTV 293
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 195 bits (499), Expect = 2e-60
Identities = 58/145 (40%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNS 455
AE L+EE+IA KE F D D G IT EL +R G + E++D+++ D D +
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 456 GTIDYGEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVL 512
GTID+ EF++ + + + EE L+ AF+ FD+DG+G I+ EL+ +TD
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 513 LEDIIREVDQDNDGRIDYGEFVAMM 537
++++IRE D D DG I+Y EFV MM
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMM 145
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 73.3 bits (181), Expect = 1e-15
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 482 AFQYFDKDGSGYITVDELQQA--CAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
AF FDKDG G IT EL N T+ L+D+I EVD D +G ID+ EF+++M +
Sbjct: 15 AFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMAR 74
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 1e-59
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 401 EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDY 460
+++++ KE F+ D++ +G IT + L+ L+++G ++ ++ + AD +G I +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 461 GEFIA-ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDII 517
EF++ + + E+ L AF+ FD +G+GYI LQ A + + +
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Query: 518 REVDQDNDGRIDYGEFVAMM 537
+ + G+I Y F+ M
Sbjct: 122 GITETE-KGQIRYDNFINTM 140
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 72.9 bits (180), Expect = 1e-15
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 482 AFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
AF+ FD + +G+IT + LQ + + ++ E D +G+I + EF++MM +
Sbjct: 11 AFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGR 70
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 196 bits (499), Expect = 1e-57
Identities = 55/298 (18%), Positives = 101/298 (33%), Gaps = 39/298 (13%)
Query: 99 DLYTLGRKLGQGQFGTTYLCT-----EIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
L + LG+G F Y T + +F K + + ++ +
Sbjct: 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERL 121
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRI----- 208
+ A+ +V EL + G L + I + E+ + I
Sbjct: 122 KPSM-QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNK--------DDDFSLKAIDFGLSV---FFKPGQ 257
++ ++E H ++H D+KP+NF+L N D L ID G S+ F G
Sbjct: 181 MLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT 240
Query: 258 IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWA-ETQQGIFDAVLK 315
IFT + + E+L K + + D + +Y +L G E + + + +
Sbjct: 241 IFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFR 300
Query: 316 GHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHP---WICENGVAPDRSL 370
D W + ML L + ++L ++ R+L
Sbjct: 301 RL--PHLDMW-------NEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTNKIRAL 349
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 192 bits (491), Expect = 5e-56
Identities = 92/328 (28%), Positives = 144/328 (43%), Gaps = 35/328 (10%)
Query: 45 LNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLG 104
L+ + + +K+ + KD I + + D Y +
Sbjct: 26 LDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINK----------IRDLRMKAED-YEVV 74
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
+ +G+G FG L +T +A K +SK ++I R D E IM A +V
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-ANSPWVVQ 133
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSLG 220
+ A++D +++VME GG+L ++ E+ A AE +V ++A HS+G
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAE----VVLALDAIHSMG 188
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTDV-VGSPYYVAPEVLLK-- 276
+HRD+KP+N LL D LK DFG + G + D VG+P Y++PEVL
Sbjct: 189 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 277 ---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333
+YG E D W+ GV LY +L G PF+A++ G + ++ IS AK
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAK 305
Query: 334 DLIRKMLCSQPSERLT---AHEVLCHPW 358
+LI L RL E+ H +
Sbjct: 306 NLICAFLTD-REVRLGRNGVEEIKRHLF 332
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 5e-56
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 401 EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDY 460
+EI L + FK +D DNSG+++ +E + ++ ++ ++D D D +G +D+
Sbjct: 2 ADEIKRLGKRFKKLDLDNSGSLSVEEFMSLP----ELQQNPLVQRVIDIFDTDGNGEVDF 57
Query: 461 GEFIAATVHLNK-LEREEHLVAAFQYFDKDGSGYITVDELQQACAE---HNMTDVLLE-- 514
EFI + ++E+ L AF+ +D D GYI+ EL Q +N+ D L+
Sbjct: 58 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQI 117
Query: 515 --DIIREVDQDNDGRIDYGEFVAMMQKGNVG 543
I D+D DGRI + EF A++ ++
Sbjct: 118 VDKTIINADKDGDGRISFEEFCAVVGGLDIH 148
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 7e-55
Identities = 80/269 (29%), Positives = 139/269 (51%), Gaps = 26/269 (9%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + LG G FG L +G +A K + K+K++ + +E E +I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFP 101
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEAC 216
+V ++ +++D+ +++VME AGGE+F + + G +SE A A+ IV E
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ----IVLTFEYL 157
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-VVGSPYYVAPEVLL 275
HSL +++RDLKPEN L+ D ++ DFG + K + T + G+P +APE++L
Sbjct: 158 HSLDLIYRDLKPENLLI---DQQGYIQVTDFGFA---KRVKGRTWTLCGTPEALAPEIIL 211
Query: 276 -KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334
K Y D W GV++Y + +G PPF+A+ I++ ++ G + F S S KD
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 335 LIRKMLCSQPSERL-----TAHEVLCHPW 358
L+R +L ++R +++ H W
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 180 bits (457), Expect = 2e-53
Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 20/167 (11%)
Query: 393 RVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE---------I 443
+ E L + ++ L + F D D+ G + DE+ R + T+ +
Sbjct: 24 QFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAV 83
Query: 444 RDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEH-----------LVAAFQYFDKDGSG 492
R V+ + +++ A + ERE + + D DG G
Sbjct: 84 RVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDG 143
Query: 493 YITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ VDEL+ ++ + D D G+++ E V + +K
Sbjct: 144 TVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELVHLFRK 190
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 5e-14
Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 2/85 (2%)
Query: 382 SAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT 441
A + + +D D G + DELK ++ + +
Sbjct: 105 EANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQE 162
Query: 442 EIRDLMDAADVDNSGTIDYGEFIAA 466
+ AD D SG ++ E +
Sbjct: 163 AAYTFFEKADTDKSGKLERTELVHL 187
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 4e-12
Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 13/126 (10%)
Query: 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY-------GSTLKDTEIRDLMDA 449
+ E+ ++ F + + ++ R + + + I L ++
Sbjct: 73 DEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNS 132
Query: 450 A----DVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE 505
D D GT+D E + +E F+ D D SG + EL +
Sbjct: 133 YYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGKLERTELVHLFRK 190
Query: 506 HNMTDV 511
M
Sbjct: 191 FWMEPY 196
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 9e-05
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEI 443
+ +E F+ DTD SG + EL R++ D +
Sbjct: 159 VPQEAA---YTFFEKADTDKSGKLERTELVHLFRKFWMEPYDPQW 200
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 3e-53
Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 26/269 (9%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + R LG G FG +L G +A K + K ++ + VE E ++ + H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HP 66
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEAC 216
I+ + G ++D+ + ++M+ GGELF + + + A AE + +E
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE----VCLALEYL 122
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-VVGSPYYVAPEVLL 275
HS +++RDLKPEN LL D + +K DFG + K T + G+P Y+APEV+
Sbjct: 123 HSKDIIYRDLKPENILL---DKNGHIKITDFGFA---KYVPDVTYTLCGTPDYIAPEVVS 176
Query: 276 KH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334
Y D W+ G+++Y +L+G PF+ ++ +L + F P P ++ KD
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF---P-PFFNEDVKD 232
Query: 335 LIRKMLCSQPSERL-----TAHEVLCHPW 358
L+ +++ S+RL +V HPW
Sbjct: 233 LLSRLITRDLSQRLGNLQNGTEDVKNHPW 261
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 7e-53
Identities = 57/290 (19%), Positives = 109/290 (37%), Gaps = 32/290 (11%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
+ K+G G+FG+ + C + G +A K SK+ L D ++ RE+
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAV 66
Query: 156 LAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR----GHYSERKAAELTRIIVG 211
L H ++V A+ + + I E C GG L D I + ++ E + +L +
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAI----------------DFGLSVFFKP 255
+ HS+ ++H D+KP N + + D G
Sbjct: 127 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186
Query: 256 GQIFTDVVGSPYYVAPEVLLKH--YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAV 313
Q+ G ++A EVL ++ + P+AD++ + + P Q + +
Sbjct: 187 PQVE---EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEI 240
Query: 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363
+G + S +L++ M+ P R +A ++ H +
Sbjct: 241 RQGRLPRIPQVL---SQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 8e-53
Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 24/266 (9%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT 164
R +G+G FG + + T +A K ++K+K + R +V +V +E+QIM L H +V
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVN 79
Query: 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSLG 220
+ +++D + +V++L GG+L + Q H+ E E +V ++ +
Sbjct: 80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE----LVMALDYLQNQR 135
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH--- 277
++HRD+KP+N LL D+ + DF ++ T + G+ Y+APE+
Sbjct: 136 IIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGA 192
Query: 278 -YGPEADVWTAGVILYILLSGVPPFW---AETQQGIFDAVLKGHIDFESDPWPLISDSAK 333
Y D W+ GV Y LL G P+ + + + I + + P S
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTY---P-SAWSQEMV 248
Query: 334 DLIRKMLCSQPSERL-TAHEVLCHPW 358
L++K+L P +R +V P+
Sbjct: 249 SLLKKLLEPNPDQRFSQLSDVQNFPY 274
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 178 bits (452), Expect = 1e-52
Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 358 WICENGVAPDRSLDPAVLS--RLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMD 415
C +G+ L +VL L + L L S EI L E+FK +
Sbjct: 2 SQCVDGIKH---LCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKIS 58
Query: 416 TD--NSGAITFDELKAGLRRYGSTLKDTEIRD-LMDAADVDNSGTIDYGEFIAA-TVHLN 471
+ + G I +E + L + K++ D + D D ++G + + EF A +V
Sbjct: 59 SAVIDDGLINKEEFQLALFKTN--KKESLFADRVFDLFDTKHNGILGFEEFARALSVFHP 116
Query: 472 KLEREEHLVAAFQYFDKDGSGYITVDELQQACA------EHNMTDVLLED----IIREVD 521
++ + +FQ +D G+I E++Q N+ D ++ED E D
Sbjct: 117 NAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEAD 176
Query: 522 QDNDGRIDYGEFVAMMQKG 540
+DG+ID E+ +++ +
Sbjct: 177 TKHDGKIDKEEWRSLVLRH 195
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 384 MNKLKKMALRVIAESLSEEEIAGL-KEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE 442
+ ++ L +L + I + + F+ DT + G I +E ++ + R+ S LK+
Sbjct: 144 VKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMT 203
Query: 443 IRDLMD 448
++ L D
Sbjct: 204 LQYLKD 209
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 4e-52
Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 28/271 (10%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G F + TG +A K ++K ++ R +V R E ++ + + I +
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GDRRWITQLH 127
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRG-HYSERKA----AELTRIIVGVVEACHSLGV 221
A++D +++VME GG+L + + G A AE IV +++ H LG
Sbjct: 128 FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAE----IVMAIDSVHRLGY 183
Query: 222 MHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQIFTDV-VGSPYYVAPEVLLK--- 276
+HRD+KP+N LL D ++ DFG + + G + + V VG+P Y++PE+L
Sbjct: 184 VHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGG 240
Query: 277 -----HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL-ISD 330
YGPE D W GV Y + G PF+A++ + ++ + +
Sbjct: 241 GPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPE 300
Query: 331 SAKDLIRKMLCSQPSERLT---AHEVLCHPW 358
A+D I+++LC P RL A + HP+
Sbjct: 301 EARDFIQRLLCP-PETRLGRGGAGDFRTHPF 330
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 2e-51
Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 16/154 (10%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG--STLKDTEIRDLMDA-------- 449
S+ + +K F +D D GAIT + ++ R+ S +K + LMD+
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 450 -ADVDNSGTIDYGEFIAATVHLNKLEREEHLV-----AAFQYFDKDGSGYITVDELQQAC 503
V ID FI + + K + +V F+ D + I+ DE
Sbjct: 61 LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 504 AEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
+ + +D +NDG + EFV
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAG 154
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 4e-15
Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA 449
M V L F+A+DT+ I+ DE G L T DA
Sbjct: 79 MKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDA 136
Query: 450 ADVDNSGTIDYGEFIAA 466
D +N G + EF+ A
Sbjct: 137 IDTNNDGLLSLEEFVIA 153
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 3e-14
Identities = 20/136 (14%), Positives = 39/136 (28%), Gaps = 14/136 (10%)
Query: 387 LKKMALRVIAE-SLSEEEIAGLKEMFKAM------DTDNSGAITFDELKAGLRRYGSTLK 439
+ MA R E + E L + + I ++ +
Sbjct: 28 FESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPE 87
Query: 440 DTE-----IRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYI 494
+ A D + I E+ L + A+F D + G +
Sbjct: 88 AKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDGLL 145
Query: 495 TVDELQQACAEHNMTD 510
+++E A ++ M D
Sbjct: 146 SLEEFVIAGSDFFMND 161
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 4e-10
Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 13/79 (16%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQA----CAEHNMTDVLLEDIIREV--------- 520
+ + F D D G IT + + E M + ++ +
Sbjct: 3 LWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLT 62
Query: 521 DQDNDGRIDYGEFVAMMQK 539
ID F+ M++
Sbjct: 63 AVAGGKGIDETTFINSMKE 81
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 2e-51
Identities = 77/269 (28%), Positives = 134/269 (49%), Gaps = 26/269 (9%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG + FA K ++K +++ R + R E ++ + K I T+
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITTLH 140
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQ-RGHYSERKA----AELTRIIVGVVEACHSLGV 221
A++D +++VM+ GG+L + + E A AE +V +++ H L
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAE----MVIAIDSVHQLHY 196
Query: 222 MHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDV-VGSPYYVAPEVLL---- 275
+HRD+KP+N L+ D + ++ DFG + G + + V VG+P Y++PE+L
Sbjct: 197 VHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 276 --KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW-PLISDSA 332
YGPE D W+ GV +Y +L G PF+AE+ + ++ F+ +S++A
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENA 313
Query: 333 KDLIRKMLCSQPSERLT---AHEVLCHPW 358
KDLIR+++CS RL + HP+
Sbjct: 314 KDLIRRLICS-REHRLGQNGIEDFKKHPF 341
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 1e-50
Identities = 83/369 (22%), Positives = 147/369 (39%), Gaps = 33/369 (8%)
Query: 6 RGSFTGKLYQGYSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNS 65
R + +++ Y E + + + ++ + + Q + +E +
Sbjct: 101 RLVCSREIFDTYIMKELLACSHPFSKSA-IEHVQGHLVKKQVPPDLFQPYIEEICQNLRG 159
Query: 66 APRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGI 125
+ D R Q V + + D R +G+G FG Y C + TG
Sbjct: 160 DVFQKFIESDKFTRFC---QWKNVELNIHLTMNDFSVH-RIIGRGGFGEVYGCRKADTGK 215
Query: 126 EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN--IVTIKGAYEDSLCVHIVMELCA 183
+A K + K+++ ++ E ++ ++ IV + A+ + +++L
Sbjct: 216 MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 184 GGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD 239
GG+L + Q G +SE AE I+ +E H+ V++RDLKP N LL D+
Sbjct: 276 GGDLHYHLSQHGVFSEADMRFYAAE----IILGLEHMHNRFVVYRDLKPANILL---DEH 328
Query: 240 FSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH--YGPEADVWTAGVILYILLSG 297
++ D GL+ F + VG+ Y+APEVL K Y AD ++ G +L+ LL G
Sbjct: 329 GHVRISDLGLACDFSKKKPHA-SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 298 VPPFWAET---QQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL-----T 349
PF + I L ++ S + L+ +L + RL
Sbjct: 388 HSPFRQHKTKDKHEIDRMTLTMAVELPDS----FSPELRSLLEGLLQRDVNRRLGCLGRG 443
Query: 350 AHEVLCHPW 358
A EV P+
Sbjct: 444 AQEVKESPF 452
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 2e-50
Identities = 31/154 (20%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 391 ALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAA 450
A + L +++I +KE F +D D G ++ +++KA + G D E+ ++
Sbjct: 4 AASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK-- 61
Query: 451 DVDNSGTIDYGEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HN 507
+ G +++ F++ + L+ + EE + AF FD+ + + ++ ++ N
Sbjct: 62 --EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDN 119
Query: 508 MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541
+ +E + G+ DY +F AM++
Sbjct: 120 FNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSG 152
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 2e-50
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 16/182 (8%)
Query: 373 AVLSRLKQFSAMNKLKKMALRVIAES--LSEEEIAGLKEMFKAMDTD--NSGAITFDELK 428
+S+ K+ +AM ++A + EE+ L E+FK + + + G I +E +
Sbjct: 3 CSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQ 62
Query: 429 AGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA-TVHLNKLEREEHLVAAFQYFD 487
L R + ++ + D DV +G I++GEF+ + V E + AF+ +D
Sbjct: 63 LALFRNRNR-RNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYD 121
Query: 488 KDGSGYITVDELQQACAE----------HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
+G+I +EL++ +M +V+++ + D+ NDG+ID E+ +
Sbjct: 122 LRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFV 181
Query: 538 QK 539
Sbjct: 182 SL 183
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 7e-05
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 384 MNKLKKMALRVIAESLSEEEIAGL-KEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE 442
+ ++ L LSE+ I + + F D N G I DE K + S +K+
Sbjct: 133 LKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMT 192
Query: 443 IRDLMD 448
+ L D
Sbjct: 193 LPYLKD 198
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
Score = 171 bits (434), Expect = 4e-50
Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 11/161 (6%)
Query: 388 KKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTEIRDL 446
++ +++ +E F M SG T E K L G + + I +
Sbjct: 5 NGKSIAGDQKAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQV 62
Query: 447 MDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQAC--- 503
+ D + G +D+ EFIAA + + + E+ L F+ +D DG+G I +EL
Sbjct: 63 YNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAV 122
Query: 504 -----AEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ + + + ++D +NDG + EF+ M K
Sbjct: 123 QALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 3e-49
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
+ L E F+A+DTD SGAI+ EL A L G L+ D ++SG I
Sbjct: 21 RHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEI 80
Query: 459 DYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDI 516
+ EF + + F+ D G G + +E++ A + +++ + +
Sbjct: 81 TFDEFKDLHHFILSMRE------GFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQAL 134
Query: 517 IREVDQDNDGRIDYGEFVAMMQK 539
+R+ D+ G + + ++V +
Sbjct: 135 MRKFDRQRRGSLGFDDYVELSIF 157
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 6e-23
Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEF 463
I ++E F+ D+ G + +E++A L G + + + LM D G++ + ++
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
Query: 464 IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVD 497
+ ++ + ++ F ++D++ +G +T
Sbjct: 152 VELSIFVCRVRN------VFAFYDRERTGQVTFT 179
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 3e-49
Identities = 59/266 (22%), Positives = 115/266 (43%), Gaps = 14/266 (5%)
Query: 103 LGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNI 162
++G+G F T Y + T +E A + RKL ++ + + + E +++ L H NI
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNI 87
Query: 163 VTIKGAYEDSL----CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
V ++E ++ C+ +V EL G L + + + R I+ ++ H+
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 147
Query: 219 LG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK 276
++HRDLK +N + S+K D GL+ + V+G+P ++APE+ +
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTG--SVKIGDLGLATLKRASFAKA-VIGTPEFMAPEMYEE 204
Query: 277 HYGPEADVWTAGVILYILLSGVPPFWAETQQG-IFDAVLKGHIDFESDPWPLISDSAKDL 335
Y DV+ G+ + + + P+ I+ V G + + K++
Sbjct: 205 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK--PASFDKVAIPEVKEI 262
Query: 336 IRKMLCSQPSERLTAHEVLCHPWICE 361
I + ER + ++L H + E
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQE 288
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 3e-48
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 402 EEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST-LKDTEIRDLMDAADVDNSGTIDY 460
+ + L +F+ +D D SG I+ EL+ L T +R ++ D +N +++
Sbjct: 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 63
Query: 461 GEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIR 518
EF ++ + F+ +D+D SG I +EL+QA + + ++D + +IR
Sbjct: 64 SEFTGVWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR 117
Query: 519 EVDQDNDGRIDYGEFVAMM 537
+ D+ G+I + +F+
Sbjct: 118 KFDRQGRGQIAFDDFIQGC 136
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 5e-24
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEF 463
I + +F+ D DNSG I +ELK L +G L D L+ D G I + +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 464 IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
I + L +L F+ +D D G+I V Q
Sbjct: 133 IQGCIVLQRLTD------IFRRYDTDQDGWIQVSYEQ 163
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 2e-15
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 473 LEREEHLVAAFQYFDKDGSGYITVDELQQACAE---HNMTDVLLEDIIREVDQDNDGRID 529
L + L FQ DKD SG I+ ELQQA + V + II D++N ++
Sbjct: 3 LPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 62
Query: 530 YGEFVAMMQK 539
+ EF + +
Sbjct: 63 FSEFTGVWKY 72
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 1e-14
Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 15/141 (10%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
+ + + + D +N + F E T+ +++ D DNSG I
Sbjct: 41 FNPVTV---RSIISMFDRENKAGVNFSEFTG------VWKYITDWQNVFRTYDRDNSGMI 91
Query: 459 DYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIR 518
D E A ++ + FD+ G G I D+ Q C L DI R
Sbjct: 92 DKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI-VLQR---LTDIFR 147
Query: 519 EVDQDNDGRI--DYGEFVAMM 537
D D DG I Y ++++M+
Sbjct: 148 RYDTDQDGWIQVSYEQYLSMV 168
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 7e-48
Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG +L T FA K++ K ++ +DVE E +++ H + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSLGVM 222
++ + VME GG+L I + +A AE II+G ++ HS G++
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAE---IILG-LQFLHSKGIV 140
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV----GSPYYVAPEVLL-KH 277
+RDLK +N LL D D +K DFG+ K + G+P Y+APE+LL +
Sbjct: 141 YRDLKLDNILL---DKDGHIKIADFGMC---KENMLGDAKTNTFCGTPDYIAPEILLGQK 194
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
Y D W+ GV+LY +L G PF + ++ +F ++ + + P + AKDL+
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY---P-RWLEKEAKDLLV 250
Query: 338 KMLCSQPSERLTAH-EVLCHPW 358
K+ +P +RL ++ HP
Sbjct: 251 KLFVREPEKRLGVRGDIRQHPL 272
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 1e-47
Identities = 87/266 (32%), Positives = 135/266 (50%), Gaps = 29/266 (10%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L E ATG +A K + K +I++++V E +++ + H + +K
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSLGVM 222
A++ + VME GGELF + + ++E +A AE IV +E HS V+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE----IVSALEYLHSRDVV 127
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV----GSPYYVAPEVLLKH- 277
+RD+K EN +L D D +K DFGL K G + G+P Y+APEVL +
Sbjct: 128 YRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
YG D W GV++Y ++ G PF+ + + +F+ +L I F P +S AK L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF---P-RTLSPEAKSLLA 237
Query: 338 KMLCSQPSERL-----TAHEVLCHPW 358
+L P +RL A EV+ H +
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEHRF 263
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 163 bits (413), Expect = 2e-47
Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 23/172 (13%)
Query: 391 ALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDEL-----KAGLRRYGSTLKDTEIRD 445
++ ++ + I K MF +D +++G I+ DE+ + G+T + +
Sbjct: 2 NSKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHK 61
Query: 446 LMDAADVDNSGT-----IDYGEFIAATVHLNKLEREEH-----------LVAAFQYFDKD 489
A +G D+ +I L E E++ A F DKD
Sbjct: 62 DAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKD 121
Query: 490 GSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+G IT+DE + + E+ R D D G++D E
Sbjct: 122 QNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 173
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 85.2 bits (211), Expect = 2e-19
Identities = 33/171 (19%), Positives = 54/171 (31%), Gaps = 15/171 (8%)
Query: 316 GHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVL 375
G I + + A D++ L + P + H+ + G+ D
Sbjct: 31 GKISLDE-----MVYKASDIVINNLGATPEQA-KRHKDAVEAFFGGAGMKYGVETD---- 80
Query: 376 SRLKQF-SAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY 434
+ KL L A++ +F +D D +GAIT DE KA +
Sbjct: 81 --WPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAA 138
Query: 435 GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH--LNKLEREEHLVAAF 483
G + + D+D SG +D E + E L
Sbjct: 139 GIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGFWYTMDPACEKLYGGA 189
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 3e-47
Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 9/162 (5%)
Query: 386 KLKKMALRV---IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE 442
K K+ A + E EI KE F +D + G I D+L+ G E
Sbjct: 3 KAKRRAAEGSSNVFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNE 62
Query: 443 IRDLMDAADVDNSGTIDYGEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQ 501
D M + SG I++ F+ L + E+ ++ AF+ D DG G I L++
Sbjct: 63 ELDAMIK---EASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEE 119
Query: 502 ACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541
T ++++ D G +DY ++ G
Sbjct: 120 LLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHGE 161
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 3e-15
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA 449
M + + E+ I FK +D D G+I L+ L G EI+++ A
Sbjct: 83 MFGEKLKGADPEDVI---MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAA 139
Query: 450 ADVDNSGTIDYGEFIAATVHLNKLERE 476
D +G +DY H E E
Sbjct: 140 FPPDVAGNVDYKNICYVITHGEDAEGE 166
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 3e-47
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 32/268 (11%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L T +A K + K +I +DVE E +++ + +
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 167 GAY--EDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSLG 220
+ D L VME GG+L I Q G + E A AE I + S G
Sbjct: 88 SCFQTMDRLY--FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE----IAIGLFFLQSKG 141
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV----GSPYYVAPEVLLK 276
+++RDLK +N +L D + +K DFG+ K G+P Y+APE++
Sbjct: 142 IIYRDLKLDNVML---DSEGHIKIADFGMC---KENIWDGVTTKTFCGTPDYIAPEIIAY 195
Query: 277 H-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335
YG D W GV+LY +L+G PF E + +F ++++ ++ + P +S A +
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY---P-KSMSKEAVAI 251
Query: 336 IRKMLCSQPSERLTAH-----EVLCHPW 358
+ ++ P +RL ++ H +
Sbjct: 252 CKGLMTKHPGKRLGCGPEGERDIKEHAF 279
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 4e-47
Identities = 85/367 (23%), Positives = 147/367 (40%), Gaps = 29/367 (7%)
Query: 4 TCRGSFTGKLYQGYSQPEDHSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENPKKD 63
T R F G L G S+ + + S ++ P ++E ++ +
Sbjct: 251 TSRNDFMGSLSFGISELQKAGVDGWFKLLSQEEGEYFNVPVPPEGSEGNEELRQKFERAK 310
Query: 64 NSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIAT 123
+P +K DN + D + LG+G FG L T
Sbjct: 311 IGQGTKAPEEKTANTISKFDNNG----NRDRMKLTD-FNFLMVLGKGSFGKVMLSERKGT 365
Query: 124 GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY--EDSLCVHIVMEL 181
+A K + K +I +DVE E +++ + + + D L VME
Sbjct: 366 DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY--FVMEY 423
Query: 182 CAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS 241
GG+L I Q G + E A I + S G+++RDLK +N +L D +
Sbjct: 424 VNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGH 480
Query: 242 LKAIDFGLSVFFKPGQIFTDVV----GSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS 296
+K DFG+ K G+P Y+APE++ + YG D W GV+LY +L+
Sbjct: 481 IKIADFGMC---KENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 537
Query: 297 GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL-----TAH 351
G PF E + +F ++++ ++ + P +S A + + ++ P +RL
Sbjct: 538 GQAPFEGEDEDELFQSIMEHNVAY---P-KSMSKEAVAICKGLMTKHPGKRLGCGPEGER 593
Query: 352 EVLCHPW 358
++ H +
Sbjct: 594 DIKEHAF 600
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 4e-47
Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 21/175 (12%)
Query: 385 NKLKKMALRVIAESLSEEEIAGLKEMFKA-MDTDNSGAITFDELKAGLRRYGSTLKDTEI 443
+ ++ + A L+E +K ++ SG + E K + + +
Sbjct: 3 QQFSWEEAEEN-GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYV 61
Query: 444 RDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQAC 503
+ A D + TID+ E++AA + + E L F+ +DKD +G I EL
Sbjct: 62 EAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIV 121
Query: 504 -------------------AEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ + +++ I VD++ DG++ EFV ++
Sbjct: 122 ESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 176
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 8e-10
Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 20/135 (14%)
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD 448
K +V + + + + MF+A DT+ I F E A L + +++
Sbjct: 46 KRFFKVPDNEEATQYV---EAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFK 102
Query: 449 AADVDNSGTIDYGEFIAATVHLNKLER-----------------EEHLVAAFQYFDKDGS 491
D D +G ID E + + KL++ EE + F D++G
Sbjct: 103 IYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGD 162
Query: 492 GYITVDELQQACAEH 506
G ++++E +
Sbjct: 163 GQLSLNEFVEGARRD 177
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 4e-47
Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 33/269 (12%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG L TG +A K + K ++ +DVE E +I+ H + +
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90
Query: 167 GAY--EDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSLG 220
+ D L VME GG+L I + + E +A AE I+ + H G
Sbjct: 91 CCFQTPDRLF--FVMEFVNGGDLMFHIQKSRRFDEARARFYAAE----IISALMFLHDKG 144
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV----VGSPYYVAPEVLLK 276
+++RDLK +N LL D + K DFG+ K G G+P Y+APE+L +
Sbjct: 145 IIYRDLKLDNVLL---DHEGHCKLADFGMC---KEGICNGVTTATFCGTPDYIAPEILQE 198
Query: 277 H-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335
YGP D W GV+LY +L G PF AE + +F+A+L + + P + + A +
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY---P-TWLHEDATGI 254
Query: 336 IRKMLCSQPSERL------TAHEVLCHPW 358
++ + P+ RL H +L HP+
Sbjct: 255 LKSFMTKNPTMRLGSLTQGGEHAILRHPF 283
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 1e-46
Identities = 84/268 (31%), Positives = 128/268 (47%), Gaps = 28/268 (10%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG C ATG +ACK + K+++ R+ E QI+ + +V++
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL-EKVNSRFVVSLA 250
Query: 167 GAYEDSLCVHIVMELCAGGELFDRIIQRG--HYSERKA----AELTRIIVGVVEACHSLG 220
AYE + +V+ L GG+L I G + E +A AE I G +E H
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE---ICCG-LEDLHRER 306
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYG 279
+++RDLKPEN LL DD ++ D GL+V GQ VG+ Y+APEV+ + Y
Sbjct: 307 IVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 363
Query: 280 PEADVWTAGVILYILLSGVPPFWAE----TQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335
D W G +LY +++G PF ++ + V + ++ S A+ L
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER----FSPQARSL 419
Query: 336 IRKMLCSQPSERL-----TAHEVLCHPW 358
++LC P+ERL +A EV HP
Sbjct: 420 CSQLLCKDPAERLGCRGGSAREVKEHPL 447
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 1e-46
Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 23/167 (13%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY----GSTLKDTEIRDLMDA------ 449
+ LK+ F D D +GA+ + + + G E++ L +A
Sbjct: 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD 61
Query: 450 -----ADVDNSGTIDYGEFIAATVHLNKLEREEH--------LVAAFQYFDKDGSGYITV 496
A V + G++ +FI T +L + E + DK+ G I
Sbjct: 62 YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINA 121
Query: 497 DELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVG 543
DE M+ + +VD + +G + E + ++ + G
Sbjct: 122 DEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRDFHFG 168
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 2e-14
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSG 456
S + +K + D + G I DE A L G + E + + D + +G
Sbjct: 94 ASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNG 151
Query: 457 TIDYGEFIAA 466
+ E + A
Sbjct: 152 ELSLDELLTA 161
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 2e-13
Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 21/143 (14%)
Query: 387 LKKMALRVIA---ESLSEEEIAGLKE--------MFKAMDTDNSGAITFDELKAGLRRYG 435
+K A + + E+ LK + K + G++T ++
Sbjct: 29 FEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLI 88
Query: 436 STLKD--------TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFD 487
+ ++ ++ D + G I+ EF A L + AF D
Sbjct: 89 FEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVD 146
Query: 488 KDGSGYITVDELQQACAEHNMTD 510
+G+G +++DEL A + +
Sbjct: 147 TNGNGELSLDELLTAVRDFHFGR 169
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 2e-13
Identities = 14/104 (13%), Positives = 33/104 (31%), Gaps = 17/104 (16%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE-----------------HNMTDVLLEDI 516
+ L F +D DG+G + + ++ N L + +
Sbjct: 4 IASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYL 63
Query: 517 IREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDA 560
+E +DG + +F+ + + G + L ++
Sbjct: 64 AKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGI 107
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 8e-06
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEI 443
+S+ E E F +DT+ +G ++ DEL +R + D E+
Sbjct: 133 MSKAEA---AEAFNQVDTNGNGELSLDELLTAVRDFHFGRLDVEL 174
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 4e-46
Identities = 89/326 (27%), Positives = 152/326 (46%), Gaps = 35/326 (10%)
Query: 53 QEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLG-----RKL 107
+E++ + + + ++ D DN + + T+ + L
Sbjct: 97 EEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLL 156
Query: 108 GQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKG 167
G+G FG L E ATG +A K + K ++++++V E +++ + + H + +K
Sbjct: 157 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKY 215
Query: 168 AYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHS-LGVM 222
+++ + VME GGELF + + +SE +A AE IV ++ HS V+
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE----IVSALDYLHSEKNVV 271
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV----GSPYYVAPEVLLKH- 277
+RDLK EN +L D D +K DFGL K G + G+P Y+APEVL +
Sbjct: 272 YRDLKLENLML---DKDGHIKITDFGLC---KEGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
YG D W GV++Y ++ G PF+ + + +F+ +L I F P + AK L+
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF---P-RTLGPEAKSLLS 381
Query: 338 KMLCSQPSERL-----TAHEVLCHPW 358
+L P +RL A E++ H +
Sbjct: 382 GLLKKDPKQRLGGGSEDAKEIMQHRF 407
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 4e-46
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 26/269 (9%)
Query: 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIV 163
LG+G +G Y +++ + A K I + + EI + HL HKNIV
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLK-HKNIV 82
Query: 164 TIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH----YSERKAAELTRIIVGVVEACHSL 219
G++ ++ + I ME GG L +++ +E+ T+ I+ ++ H
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVLLKH- 277
++HRD+K +N L+ LK DFG S G+ Y+APE++ K
Sbjct: 142 QIVHRDIKGDNVLINTYSGV--LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 278 --YGPEADVWTAGVILYILLSGVPPFW--AETQQGIFDAVLKGHIDFESDPWPL---ISD 330
YG AD+W+ G + + +G PPF+ E Q +F + + +S
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF------KVGMFKVHPEIPESMSA 253
Query: 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
AK I K P +R A+++L ++
Sbjct: 254 EAKAFILKCFEPDPDKRACANDLLVDEFL 282
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 5e-46
Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 31/267 (11%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G FG L A + +A K + K+ ++ +++ + + E ++ H +V +
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 167 GAY--EDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSLG 220
++ D L V++ GGELF + + + E +A AE I + HSL
Sbjct: 106 FSFQTADKLY--FVLDYINGGELFYHLQRERCFLEPRARFYAAE----IASALGYLHSLN 159
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV----VGSPYYVAPEVLLK 276
+++RDLKPEN LL D + DFGL K G+P Y+APEVL K
Sbjct: 160 IVYRDLKPENILL---DSQGHIVLTDFGLC---KENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 277 H-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335
Y D W G +LY +L G+PPF++ ++D +L + P I++SA+ L
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL---K-PNITNSARHL 269
Query: 336 IRKMLCSQPSERL----TAHEVLCHPW 358
+ +L ++RL E+ H +
Sbjct: 270 LEGLLQKDRTKRLGAKDDFMEIKSHVF 296
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 2e-45
Identities = 67/345 (19%), Positives = 129/345 (37%), Gaps = 44/345 (12%)
Query: 24 SNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGID 83
S +S + + +S+ S Q+L + E + ++ +
Sbjct: 4 SVSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEV------ 57
Query: 84 NQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDV 143
T ++G+G FG + + TG + A K + +
Sbjct: 58 ---------------HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV---------RL 93
Query: 144 EDVR-REIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA 202
E R E+ L+ IV + GA + V+I MEL GG L I Q G E +A
Sbjct: 94 EVFRVEELVACAGLS-SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA 152
Query: 203 AELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT-- 260
+ +E H+ ++H D+K +N +L++ D DFG ++ +P +
Sbjct: 153 LYYLGQALEGLEYLHTRRILHGDVKADN-VLLSSDGS-RAALCDFGHALCLQPDGLGKSL 210
Query: 261 ----DVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVL 314
+ G+ ++APEV++ + D+W++ ++ +L+G P+ +
Sbjct: 211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS 270
Query: 315 KGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ E P + I++ L +P R +A E+
Sbjct: 271 EPPPIREIPPS--CAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 2e-45
Identities = 31/160 (19%), Positives = 49/160 (30%), Gaps = 25/160 (15%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEI---------------R 444
E + F D D +G I + + + +
Sbjct: 2 YERR---IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQ 58
Query: 445 DLMDAADVDNSGTIDYGEFIAATVHLNKLEREE-------HLVAAFQYFDKDGSGYITVD 497
L AD D I EF+ V + + + L AA D DG G +TV
Sbjct: 59 GLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVA 118
Query: 498 ELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
+ +A + + L +D D DG++ E V
Sbjct: 119 DTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVPAF 158
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 3e-16
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 17/83 (20%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQAC-----------------AEHNMTDVLLEDI 516
E E + A F FD+DG+G+I + A A + + L + +
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 517 IREVDQDNDGRIDYGEFVAMMQK 539
D+D D RI EFV K
Sbjct: 61 AGIADRDGDQRITREEFVTGAVK 83
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 9e-15
Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSG 456
+ +E L DTD GA+T + L +G + + R A D D G
Sbjct: 90 DRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDG 147
Query: 457 TIDYGEFIAA 466
+ E + A
Sbjct: 148 KVGETEIVPA 157
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 4e-04
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY 434
+ E+ ++ A+DTD G + E+ RY
Sbjct: 129 VPEDLA---RQAAAALDTDGDGKVGETEIVPAFARY 161
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 2e-45
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 35/273 (12%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
LG+G FG + C ATG +ACK ++K++L R+ + E +I+ + IV++
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVSLA 251
Query: 167 GAYE--DSLCVHIVMELCAGGELFDRIIQRGH----YSERKA----AELTRIIVGVVEAC 216
A+E LC +VM + GG++ I + E +A A+ I+ G +E
Sbjct: 252 YAFETKTDLC--LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ---IVSG-LEHL 305
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-VVGSPYYVAPEVLL 275
H +++RDLKPEN LL DDD +++ D GL+V K GQ T G+P ++APE+LL
Sbjct: 306 HQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 276 -KHYGPEADVWTAGVILYILLSGVPPFWAE----TQQGIFDAVLKGHIDFESDPWPLISD 330
+ Y D + GV LY +++ PF A + + VL+ + + S
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSP 418
Query: 331 SAKDLIRKMLCSQPSERL-----TAHEVLCHPW 358
++KD +L P +RL + + HP
Sbjct: 419 ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 161 bits (411), Expect = 2e-45
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 27/266 (10%)
Query: 107 LGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIV 163
LGQG FG +L +I+ +A K + K L R+ V + E I+ H IV
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKMERDILVE-VNHPFIV 89
Query: 164 TIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHSL 219
+ A++ ++++++ GG+LF R+ + ++E AE + ++ HSL
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE----LALALDHLHSL 145
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVLLKH- 277
G+++RDLKPEN LL D++ +K DFGLS + G+ Y+APEV+ +
Sbjct: 146 GIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337
+ AD W+ GV+++ +L+G PF + ++ +LK + P +S A+ L+R
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM---P-QFLSPEAQSLLR 258
Query: 338 KMLCSQPSERL-----TAHEVLCHPW 358
+ P+ RL E+ H +
Sbjct: 259 MLFKRNPANRLGAGPDGVEEIKRHSF 284
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 164 bits (416), Expect = 2e-45
Identities = 76/332 (22%), Positives = 133/332 (40%), Gaps = 39/332 (11%)
Query: 54 EFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLG-----RKLG 108
+ + D P M GI+ + + ++ L R +G
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIG 61
Query: 109 QGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGA 168
+G + L T +A + + K + ED++ V+ E + + H +V +
Sbjct: 62 RGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC 121
Query: 169 Y--EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDL 226
+ E L V+E GG+L + ++ E A + I + H G+++RDL
Sbjct: 122 FQTESRLF--FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 179
Query: 227 KPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV----GSPYYVAPEVLLKH-YGPE 281
K +N LL D + +K D+G+ K G D G+P Y+APE+L YG
Sbjct: 180 KLDNVLL---DSEGHIKLTDYGMC---KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 233
Query: 282 ADVWTAGVILYILLSGVPPFW---------AETQQGIFDAVLKGHIDFESDPWPLISDSA 332
D W GV+++ +++G PF T+ +F +L+ I P +S A
Sbjct: 234 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI---P-RSLSVKA 289
Query: 333 KDLIRKMLCSQPSERLTAH------EVLCHPW 358
+++ L P ERL H ++ HP+
Sbjct: 290 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 321
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 2e-45
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 107 LGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK 166
+G+G + L T +A K + K + ED++ V+ E + + H +V +
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 167 GAY--EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHR 224
+ E L V+E GG+L + ++ E A + I + H G+++R
Sbjct: 77 SCFQTESRLF--FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 134
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV----VGSPYYVAPEVLLKH-YG 279
DLK +N LL D + +K D+G+ K G D G+P Y+APE+L YG
Sbjct: 135 DLKLDNVLL---DSEGHIKLTDYGMC---KEGLRPGDTTSTFCGTPNYIAPEILRGEDYG 188
Query: 280 PEADVWTAGVILYILLSGVPPFW---------AETQQGIFDAVLKGHIDFESDPWPLISD 330
D W GV+++ +++G PF T+ +F +L+ I P +S
Sbjct: 189 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI---P-RSLSV 244
Query: 331 SAKDLIRKMLCSQPSERLTAH------EVLCHPW 358
A +++ L P ERL H ++ HP+
Sbjct: 245 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 278
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 7e-45
Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 27/267 (10%)
Query: 107 LGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISR-EDVEDVRREIQIMHHLAGHKNI 162
LG+G +G + ++ TG FA K + K ++ +D + E I+ H I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE-VKHPFI 83
Query: 163 VTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEACHS 218
V + A++ +++++E +GGELF ++ + G + E A AE I + + H
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE---ISMAL-GHLHQ 139
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEVLLKH 277
G+++RDLKPEN +L + +K DFGL G + G+ Y+APE+L++
Sbjct: 140 KGIIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRS 196
Query: 278 -YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336
+ D W+ G ++Y +L+G PPF E ++ D +LK ++ P P ++ A+DL+
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL---P-PYLTQEARDLL 252
Query: 337 RKMLCSQPSERL-----TAHEVLCHPW 358
+K+L + RL A EV HP+
Sbjct: 253 KKLLKRNAASRLGAGPGDAGEVQAHPF 279
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 1e-44
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
+ +I KE F +D + G I ++L L G D + +M + G I
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPI 56
Query: 459 DYGEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLED 515
++ F+ LN + E+ + AF FD++ SG+I D L++ TD +++
Sbjct: 57 NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDE 116
Query: 516 IIREVDQDNDGRIDYGEFVAMMQKG 540
+ RE D G +Y EF +++ G
Sbjct: 117 MYREAPIDKKGNFNYVEFTRILKHG 141
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 3e-14
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA 449
M + + E+ I + F D + SG I D L+ L G D E+ ++
Sbjct: 64 MFGEKLNGTDPEDVI---RNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 120
Query: 450 ADVDNSGTIDYGEFIA 465
A +D G +Y EF
Sbjct: 121 APIDKKGNFNYVEFTR 136
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 2e-44
Identities = 84/336 (25%), Positives = 151/336 (44%), Gaps = 34/336 (10%)
Query: 45 LNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLG 104
+ +E + ++ + + + + I + + L
Sbjct: 1 MAHHHHHHEEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIEN-FELL 59
Query: 105 RKLGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISR-EDVEDVRREIQIMHHLAGHK 160
+ LG G +G +L +I+ TG +A K + K ++ + + E R E Q++ H+
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA----AELTRIIVGVVEAC 216
+VT+ A++ +H++++ GGELF + QR ++E + E IV +E
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGE----IVLALEHL 175
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS--VFFKPGQIFTDVVGSPYYVAPEVL 274
H LG+++RD+K EN LL D + + DFGLS + D G+ Y+AP+++
Sbjct: 176 HKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 275 LKH---YGPEADVWTAGVILYILLSGVPPFWAE----TQQGIFDAVLKGHIDFESDPWPL 327
+ D W+ GV++Y LL+G PF + +Q I +LK + P
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY---P-QE 288
Query: 328 ISDSAKDLIRKMLCSQPSERL-----TAHEVLCHPW 358
+S AKDLI+++L P +RL A E+ H +
Sbjct: 289 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 3e-44
Identities = 26/163 (15%), Positives = 51/163 (31%), Gaps = 18/163 (11%)
Query: 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT---------EIRD 445
I ES + +K + +D G I+ ++ + R K + E
Sbjct: 4 ITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLR 63
Query: 446 LMDAADVDNSGTIDYGEFIAATVHL-------NKLEREEHLVAAFQYFDKDGSGYITVDE 498
+ D + I E K + + D D GY+++ E
Sbjct: 64 VADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPE 123
Query: 499 LQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ ++TD +D + +G+I EF+ +
Sbjct: 124 FKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVND 166
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 8e-16
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 390 MALRVIAESLSEEEIAG--LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLM 447
++ E+ +A M+ +DTD G ++ E KA L+ G L D +
Sbjct: 85 ATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCF 144
Query: 448 DAADVDNSGTIDYGEFIAATVHLNKLEREEHL 479
+ D + +G I EF+ E L
Sbjct: 145 NTLDFNKNGQISRDEFLVTVNDFLFGLEETAL 176
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 2e-13
Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 12/136 (8%)
Query: 387 LKKMALRVI-----AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR-------Y 434
+ +A+R+ + +EE + + I+ +E
Sbjct: 36 YELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGE 95
Query: 435 GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYI 494
+ + + D D D G + EF A + ++ + F D + +G I
Sbjct: 96 EKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQI 155
Query: 495 TVDELQQACAEHNMTD 510
+ DE +
Sbjct: 156 SRDEFLVTVNDFLFGL 171
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 3e-44
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 436 STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYIT 495
+ LKD ++ + A + + EF A +K + + AF D+D SG+I
Sbjct: 4 AGLKDADVAAALAACSAA--DSFKHKEFFAKVGLASK--SLDDVKKAFYVIDQDKSGFIE 59
Query: 496 VDELQQACAEH-----NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
DEL+ +TD + + + D+D DG I EF AM++
Sbjct: 60 EDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 1e-15
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 15/90 (16%)
Query: 379 KQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY---G 435
K+F A L S ++ +K+ F +D D SG I DELK L+ +
Sbjct: 27 KEFFAKVGLASK---------SLDD---VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSA 74
Query: 436 STLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
L D E + + D D G I EF A
Sbjct: 75 RALTDAETKAFLADGDKDGDGMIGVDEFAA 104
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 3e-44
Identities = 85/344 (24%), Positives = 144/344 (41%), Gaps = 62/344 (18%)
Query: 56 SKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTT 115
S + +++P N + + G + YT + +G G FG
Sbjct: 2 SFTMSNAPLNGVKLNPLDDPNKVIK-----VLASDGKTGEQREIAYTNCKVIGNGSFGVV 56
Query: 116 YLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK------GAY 169
+ + + E A K + +D RE+QIM + H N+V +K G
Sbjct: 57 FQAKLVESD-EVAIKKV-------LQDKRFKNRELQIMRIV-KHPNVVDLKAFFYSNGDK 107
Query: 170 EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGV--------VEACHSLGV 221
+D + +++V+E E R + HY++ K + +++ + + HS+G+
Sbjct: 108 KDEVFLNLVLEYV--PETVYRASR--HYAKLKQ-TMPMLLIKLYMYQLLRSLAYIHSIGI 162
Query: 222 MHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL--KHYG 279
HRD+KP+N LL++ LK IDFG + G+ + S YY APE++ +Y
Sbjct: 163 CHRDIKPQN-LLLDPPSG-VLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYT 220
Query: 280 PEADVWTAGVILYILLSGVPPFWAET--QQ--GIFD-----------AVLKGHIDF---- 320
D+W+ G ++ L+ G P F E+ Q I + +++
Sbjct: 221 TNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQ 280
Query: 321 -ESDPW-----PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
P+ P A DLI ++L PS RLTA E LCHP+
Sbjct: 281 IRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 3e-44
Identities = 41/194 (21%), Positives = 80/194 (41%), Gaps = 17/194 (8%)
Query: 361 ENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSG 420
E + L+ +V L+ + ++ + + L +++E+ L FK SG
Sbjct: 23 EQFGLIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNEC--PSG 80
Query: 421 AITFDELKAGLRRYGSTLKDTEIRD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHL 479
+ + K ++ T L +A D D++G + + +FI L + +E L
Sbjct: 81 VVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKL 140
Query: 480 VAAFQYFDKDGSGYITVDELQQAC-AEHNMT-------------DVLLEDIIREVDQDND 525
AF +D + GYIT +E+ A ++M +E +++D++ D
Sbjct: 141 NWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKD 200
Query: 526 GRIDYGEFVAMMQK 539
G + EF+ QK
Sbjct: 201 GVVTIDEFIESCQK 214
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 1e-43
Identities = 30/187 (16%), Positives = 62/187 (33%), Gaps = 25/187 (13%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT------EIRDLMDAADV 452
S + E++ D D SG + EL+ ++ K E++ +D
Sbjct: 10 SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQ 69
Query: 453 DNSGTIDYGEFIA---------ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQAC 503
+ G I E +L+ E + ++ +D D SG+I +EL+
Sbjct: 70 RDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFL 129
Query: 504 AE----------HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSL 553
+ + +++ D +NDG+++ E ++ L +
Sbjct: 130 KDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMC 189
Query: 554 NMSMRDA 560
A
Sbjct: 190 GKEFNKA 196
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 3e-35
Identities = 38/233 (16%), Positives = 80/233 (34%), Gaps = 35/233 (15%)
Query: 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAM--NKLKKM 390
++LI++ L + ++ + G D + + + + + + +
Sbjct: 39 QNLIQE-LLQARKKAGLELSPEMKTFVDQYGQRDDGKIG------IVELAHVLPTEENFL 91
Query: 391 ALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT--------E 442
L + S EE + ++ DTD+SG I +ELK L+ T
Sbjct: 92 LLFRCQQLKSCEE---FMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEY 148
Query: 443 IRDLMDAADVDNSGTIDYGEFIA--------ATVHLNKLEREEHLVAAFQYFDKDGSGYI 494
++ D +N G ++ E + AF+ +D+DG+GYI
Sbjct: 149 TDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYI 208
Query: 495 TVDELQQACAE--HNMTDVLLEDIIRE-----VDQDNDGRIDYGEFVAMMQKG 540
+EL + L + I + + G++ + ++ G
Sbjct: 209 DENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSAG 261
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 3e-13
Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 469 HLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVL------LEDIIREV 520
+ + + + +FD DGSGY+ ELQ E ++ + +
Sbjct: 9 QSSLITASQ-FFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQY 67
Query: 521 DQDNDGRIDYGEFVAMMQKGNVGLGRRTMRN 551
Q +DG+I E ++ L +
Sbjct: 68 GQRDDGKIGIVELAHVLPTEENFLLLFRCQQ 98
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 2e-43
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 14/110 (12%)
Query: 443 IRDLMDAADV-------DNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYIT 495
+ ++ A D+ + GT DY F K + + F+ DKD SG+I
Sbjct: 2 MTKVLKADDINKAISAFKDPGTFDYKRFFHLVGLKGK--TDAQVKEVFEILDKDQSGFIE 59
Query: 496 VDELQQACAEH-----NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540
+EL+ ++ D + ++ D D+DG+I EF M+ +
Sbjct: 60 EEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 6e-15
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY---GSTLKDTEIRDLMDAADVDNSG 456
++ + +KE+F+ +D D SG I +ELK L+ + G L DTE + L+ A D D+ G
Sbjct: 39 TDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG 95
Query: 457 TIDYGEFIA 465
I EF
Sbjct: 96 KIGADEFAK 104
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 156 bits (395), Expect = 3e-43
Identities = 62/331 (18%), Positives = 109/331 (32%), Gaps = 81/331 (24%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATG-------IEFACKSISKRK----------------- 136
+ + +G+G FG + I + +++ K
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 137 -------------------------------LISREDVEDVRREIQIMHHLAGHKNIVTI 165
L S ++ +I+ M + KN V
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS-TKNTVGQ 126
Query: 166 KGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA---CHSLGVM 222
+ ++I M+LC L D + +R +R+ I + + EA HS G+M
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLM 186
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLS-------------VFFKPGQIFTDVVGSPYYV 269
HRDLKP N D +K DFGL T VG+ Y+
Sbjct: 187 HRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYM 243
Query: 270 APEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328
+PE + +Y + D+++ G+IL+ LL + I V +
Sbjct: 244 SPEQIHGNNYSHKVDIFSLGLILFELL--YSFSTQMERVRIITDVRNLKF---PLLFTQK 298
Query: 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+++ ML P+ER A +++ +
Sbjct: 299 YPQEHMMVQDMLSPSPTERPEATDIIENAIF 329
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 4e-42
Identities = 80/313 (25%), Positives = 138/313 (44%), Gaps = 27/313 (8%)
Query: 58 ENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGH--KTDNIRDLYTLGRKLGQGQFGTT 115
+ +S + Q L + R L K+G+G G
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIV 61
Query: 116 YLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175
L E +G + A K + L ++ E + E+ IM H N+V + +Y +
Sbjct: 62 CLAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEEL 117
Query: 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN 235
++ME GG L D I+ + +E + A + ++ + H+ GV+HRD+K ++ LL
Sbjct: 118 WVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL-- 174
Query: 236 KDDDFSLKAIDFGLSVFFKPGQIFTD------VVGSPYYVAPEVLL-KHYGPEADVWTAG 288
D +K DFG QI D +VG+PY++APEV+ Y E D+W+ G
Sbjct: 175 -TLDGRVKLSDFGFC-----AQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLG 228
Query: 289 VILYILLSGVPPFWAET-QQGIFDAVLKGHIDFE-SDPWPLISDSAKDLIRKMLCSQPSE 346
+++ ++ G PP+++++ Q + + S S +D + +ML P E
Sbjct: 229 IMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKV---SPVLRDFLERMLVRDPQE 285
Query: 347 RLTAHEVLCHPWI 359
R TA E+L HP++
Sbjct: 286 RATAQELLDHPFL 298
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 151 bits (382), Expect = 4e-42
Identities = 36/194 (18%), Positives = 71/194 (36%), Gaps = 32/194 (16%)
Query: 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE----------IRDLM 447
+ + + AG ++++ D D++G I EL R L+ + + M
Sbjct: 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFM 63
Query: 448 DAADVDNSGTIDYGEFIAATV-----------HLNKLEREEHLVAAFQYFDKDGSGYITV 496
A D G + E + L+ + ++ +D D SGYI+
Sbjct: 64 SAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISA 123
Query: 497 DELQQACAE----------HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ-KGNVGLG 545
EL+ + N D + +++ D++ DGR+D + ++ + N L
Sbjct: 124 AELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQ 183
Query: 546 RRTMRNSLNMSMRD 559
+ +S RD
Sbjct: 184 FKMDASSQVERKRD 197
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 124 bits (312), Expect = 3e-32
Identities = 28/186 (15%), Positives = 64/186 (34%), Gaps = 30/186 (16%)
Query: 382 SAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLK-- 439
+ + ++ L + + ++++ D D+SG I+ ELK L+ K
Sbjct: 81 NMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKK 140
Query: 440 ------DTEIRDLMDAADVDNSGTIDYGEFIA------------ATVHLNKLEREEHLVA 481
D +M D + G +D + +++ER+
Sbjct: 141 IPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEK 200
Query: 482 AFQYFDKDGSGYITVDELQQACAE------HNMTDVLLED----IIREVDQDNDGRIDYG 531
F ++D +G + E+ + +++ L+ ++ D + DG+I
Sbjct: 201 IFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKS 260
Query: 532 EFVAMM 537
E +
Sbjct: 261 ELALCL 266
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 6e-42
Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
+ + YT K+GQG GT Y ++ATG E A + + L + E + EI +M
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVM 71
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
+ NIV +Y + +VME AGG L D ++ E + A + R + +
Sbjct: 72 RENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQAL 129
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD------VVGSPY 267
E HS V+HRD+K +N LL D S+K DFG QI + +VG+PY
Sbjct: 130 EFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFC-----AQITPEQSKRSTMVGTPY 181
Query: 268 YVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFESDP- 324
++APEV+ K YGP+ D+W+ G++ ++ G PP+ E + ++ I P
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY------LIATNGTPE 235
Query: 325 ---WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+S +D + + L +R +A E+L H ++
Sbjct: 236 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 2e-41
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE-IRDLMDAADVDN 454
E LS E + F M SG +T E K + + + + + D +
Sbjct: 8 VEELSATECHQWYKKF--MTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNK 65
Query: 455 SGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQA---------CAE 505
G ID+ E++AA + K + ++ L F+ +D DG+G I EL C E
Sbjct: 66 DGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNE 125
Query: 506 HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ + ++D + DG + EF+ +QK
Sbjct: 126 AMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 2e-12
Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 15/157 (9%)
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD 448
K + S S + ++MF+ D + G I F E A L D ++R
Sbjct: 38 KQFFGLKNLSPSANKYV--EQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFK 95
Query: 449 AADVDNSGTIDYGEF---IAATVHLNKLER----EEHLVAAFQYFDKDGSGYITVDELQQ 501
DVD +G ID GE I A +N+ EE F D +G G ++++E +
Sbjct: 96 LYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFME 155
Query: 502 ACAEH-----NMTDVL-LEDIIREVDQDNDGRIDYGE 532
+ +T L L I++ + D E
Sbjct: 156 GVQKDEVLLDILTRSLDLTHIVKLIQNDGKNPHAPEE 192
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 3e-41
Identities = 89/354 (25%), Positives = 139/354 (39%), Gaps = 72/354 (20%)
Query: 57 KENPKKDNSAPRISPSKKDNIMRRGIDNQTYYV-----LGHKTDNIRDL-YTLGRKLGQG 110
+ ++ P PS ++ + + G D +++ YT + +G G
Sbjct: 6 RTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNG 65
Query: 111 QFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIK---- 166
FG Y +G A K + +D RE+QIM L H NIV ++
Sbjct: 66 SFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 117
Query: 167 --GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGV--------VEAC 216
G +D + +++V++ E R+ + HYS K L I V + +
Sbjct: 118 SSGEKKDEVYLNLVLDYV--PETVYRVAR--HYSRAKQ-TLPVIYVKLYMYQLFRSLAYI 172
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL- 275
HS G+ HRD+KP+N LL++ D LK DFG + G+ + S YY APE++
Sbjct: 173 HSFGICHRDIKPQN-LLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 230
Query: 276 -KHYGPEADVWTAGVILYILLSGVPPFWAETQQG---------IFD-----------AVL 314
Y DVW+AG +L LL G P F G I +
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIF-----PGDSGVDQLVEIIKVLGTPTREQIREMN 285
Query: 315 KGHIDF-----ESDPW-----PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
+ +F ++ PW P A L ++L P+ RLT E H +
Sbjct: 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 151 bits (382), Expect = 4e-41
Identities = 73/359 (20%), Positives = 134/359 (37%), Gaps = 30/359 (8%)
Query: 38 SDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNI 97
S Y + + + E D + + + D+
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMDPMPAGGRAGSLKDPDVAELFFK---------DDP 52
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
L++ R++G G FG Y ++ A K +S S E +D+ +E++ + L
Sbjct: 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH 217
H N + +G Y +VME C G + + E + A +T + + H
Sbjct: 113 -HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF--TDVVGSPYYVAPEVLL 275
S ++HRD+K N LL + +K DFG + + VG+PY++APEV+L
Sbjct: 172 SHNMIHRDVKAGNILL---SEPGLVKLGDFGSA-----SIMAPANSFVGTPYWMAPEVIL 223
Query: 276 ----KHYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFESDPWPLISD 330
Y + DVW+ G+ L PP + ++ +S W S+
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SE 280
Query: 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKK 389
++ + L P +R T+ +L H ++ P + + ++ L+
Sbjct: 281 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER--PPTVIMDLIQRTKDAVRELDNLQY 337
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 4e-41
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 437 TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITV 496
LK +I+ +DA + G+ ++ +F A V L + + + F+ D D SG+I
Sbjct: 6 LLKADDIKKALDAVKAE--GSFNHKKFFA-LVGLKAMSAND-VKKVFKAIDADASGFIEE 61
Query: 497 DELQQACAEH-----NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540
+EL+ ++TD + ++ D+D DG+I EF ++ +
Sbjct: 62 EELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 2e-18
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 16/110 (14%)
Query: 365 APDRSLDPAVLSRLKQFSAMNK------LKKMALRVIAESLSEEEIAGLKEMFKAMDTDN 418
A D + L A + L+ ++S + +K++FKA+D D
Sbjct: 3 AKDLLKADDIKKALDAVKAEGSFNHKKFFALVGLK----AMSAND---VKKVFKAIDADA 55
Query: 419 SGAITFDELKAGLRRY---GSTLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
SG I +ELK L+ + G L D E + + AAD D G I EF
Sbjct: 56 SGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFET 105
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 2e-40
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 434 YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGY 493
+ L D ++ + A + + +Y F A K + + AF D+D SG+
Sbjct: 3 FSGILADADVAAALKACEAA--DSFNYKAFFAKVGLTAK--SADDIKKAFFVIDQDKSGF 58
Query: 494 ITVDELQQACAEH-----NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
I DEL+ +TD + ++ D D DG I E+ A+++
Sbjct: 59 IEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 8e-16
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 15/90 (16%)
Query: 379 KQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY---G 435
K F A L S ++ +K+ F +D D SG I DELK L+ +
Sbjct: 28 KAFFAKVGLTAK---------SADD---IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGA 75
Query: 436 STLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
L D E + + A D D G I E+ A
Sbjct: 76 RALTDAETKAFLKAGDSDGDGAIGVDEWAA 105
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 5e-40
Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 22/276 (7%)
Query: 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
+ +L+T K+G+G FG + + T A K I + + +++ED+++EI ++
Sbjct: 17 KADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVL 74
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
+ G+Y + I+ME GG D +++ G E + A + R I+ +
Sbjct: 75 SQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGL 132
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF------TDVVGSPY 267
+ HS +HRD+K N LL + +K DFG++ GQ+ VG+P+
Sbjct: 133 DYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVA-----GQLTDTQIKRNTFVGTPF 184
Query: 268 YVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326
++APEV+ + Y +AD+W+ G+ L G PP + + K + +
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY- 243
Query: 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362
S K+ + L +PS R TA E+L H +I N
Sbjct: 244 --SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 8e-40
Identities = 75/305 (24%), Positives = 135/305 (44%), Gaps = 57/305 (18%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
+D Y L RKLG+G++ + I + + K++ + ++REI+I+ +
Sbjct: 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVV---V---KILKPVKKKKIKREIKILEN 86
Query: 156 LAGHKNIVTIK------GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII 209
L G NI+T+ + +L V F ++ Q ++ I
Sbjct: 87 LRGGPNIITLADIVKDPVSRTPALVFEHVNNT-----DFKQLYQT--LTDYDIRFYMYEI 139
Query: 210 VGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV 269
+ ++ CHS+G+MHRD+KP N ++++ + L+ ID+GL+ F+ PGQ + V S Y+
Sbjct: 140 LKALDYCHSMGIMHRDVKPHN-VMIDHEH-RKLRLIDWGLAEFYHPGQEYNVRVASRYFK 197
Query: 270 APEVLL--KHYGPEADVWTAGVILYILLSGVPPFWA---ETQQ-----------GIFDAV 313
PE+L+ + Y D+W+ G +L ++ PF+ Q ++D +
Sbjct: 198 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 257
Query: 314 LKGHIDFESD-----------PW---------PLISDSAKDLIRKMLCSQPSERLTAHEV 353
K +I+ + W L+S A D + K+L RLTA E
Sbjct: 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317
Query: 354 LCHPW 358
+ HP+
Sbjct: 318 MEHPY 322
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 9e-40
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
I DL LG +G G G + TG A K + R+ ++E+ + + ++ ++
Sbjct: 23 EINDLENLGE-MGSGTCGQVWKMRFRKTGHVIAVKQM--RRSGNKEENKRILMDLDVVLK 79
Query: 156 LAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA 215
IV G + + V I MEL + +G ER ++T IV +
Sbjct: 80 SHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYY 139
Query: 216 CHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF-----TDVVGSPYYV 269
GV+HRD+KP N LL D+ +K DFG+S G++ G Y+
Sbjct: 140 LKEKHGVIHRDVKPSNILL---DERGQIKLCDFGIS-----GRLVDDKAKDRSAGCAAYM 191
Query: 270 APEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDA----------V 313
APE + Y ADVW+ G+ L L +G P+ + + F+ +
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY--KNCKTDFEVLTKVLQEEPPL 249
Query: 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
L GH+ F S + ++ L +R +++L H +I
Sbjct: 250 LPGHMGF--------SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 1e-39
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 36/282 (12%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
++ L +G G +G Y + TG A K + ++ ++ E++++EI ++ +
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSH 79
Query: 159 HKNIVTIKGAYEDSLCVH------IVMELCAGGELFD--RIIQRGHYSERKAAELTRIIV 210
H+NI T GA+ +VME C G + D + + E A + R I+
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI------FTDVVG 264
+ H V+HRD+K +N LL ++ +K +DFG+S Q+ +G
Sbjct: 140 RGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVS-----AQLDRTVGRRNTFIG 191
Query: 265 SPYYVAPEVLLKH------YGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGH 317
+PY++APEV+ Y ++D+W+ G+ + G PP + +F
Sbjct: 192 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA 251
Query: 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+S W S + I L S+R +++ HP+I
Sbjct: 252 PRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 2e-39
Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 3/144 (2%)
Query: 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSG 456
+ L+EE+IA KE F D D G IT EL +R G + E++D+++ D D +G
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 457 TIDYGEFIA-ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL 513
TID+ EF+ + + EE + AF+ FDKDG+GYI+ EL+ +TD +
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 423
Query: 514 EDIIREVDQDNDGRIDYGEFVAMM 537
+++IRE D D DG+++Y EFV MM
Sbjct: 424 DEMIREADIDGDGQVNYEEFVQMM 447
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 93.8 bits (233), Expect = 1e-20
Identities = 39/143 (27%), Positives = 54/143 (37%), Gaps = 9/143 (6%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
G + D+ T E+K + ++ I D G I
Sbjct: 241 FKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGI-------DFKEDGNI 293
Query: 459 DYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQA--CAEHNMTDVLLEDI 516
+ T E+ AF FDKDG G IT EL N T+ L+D+
Sbjct: 294 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 353
Query: 517 IREVDQDNDGRIDYGEFVAMMQK 539
I EVD D +G ID+ EF+ MM +
Sbjct: 354 INEVDADGNGTIDFPEFLTMMAR 376
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 13/71 (18%)
Query: 469 HLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRI 528
K E + F KD Y T E++ + ++ ++ I
Sbjct: 239 DFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFE----------GDTLVNRIELKG---I 285
Query: 529 DYGEFVAMMQK 539
D+ E ++
Sbjct: 286 DFKEDGNILGH 296
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-39
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 102 TLGRKLGQGQFGTTYLCTEIAT--GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH 159
+ +G+G FG A + A K ++ S + + E++ + + H
Sbjct: 11 EVEEVVGRGAFGVVCK----AKWRAKDVAIK-----QIESESERKAFIVELRQLSRVN-H 60
Query: 160 KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC--- 216
NIV + GA + +C +VME GG L++ + AA + +
Sbjct: 61 PNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 217 HSL---GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEV 273
HS+ ++HRDLKP N LLV LK DFG + + T+ GS ++APEV
Sbjct: 119 HSMQPKALIHRDLKPPNLLLV--AGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEV 174
Query: 274 LL-KHYGPEADVWTAGVILYILLSGVPPFW--AETQQGIFDAVLKGHIDFESDPWPLISD 330
+Y + DV++ G+IL+ +++ PF I AV G P +
Sbjct: 175 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-------RPPLIK 227
Query: 331 SA----KDLIRKMLCSQPSERLTAHEVL 354
+ + L+ + PS+R + E++
Sbjct: 228 NLPKPIESLMTRCWSKDPSQRPSMEEIV 255
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-39
Identities = 44/253 (17%), Positives = 81/253 (32%), Gaps = 30/253 (11%)
Query: 302 WAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361
E + G++ + PL + R Q R WI
Sbjct: 4 TKEAVKAS-----DGNLLGDPGRIPLSKRESIKWQRPRFTRQALMRCCLI-----KWILS 53
Query: 362 NGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGA 421
+ + L L ++ + +++E+ L FK +G
Sbjct: 54 SAAPQGSDSSDSELELSTVRHQPEGLDQLQAQ---TKFTKKELQSLYRGFKNEC--PTGL 108
Query: 422 ITFDELKAGLRRYGSTLKDTEIRD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 480
+ D K ++ T L +A D D +G I + +F+ L + E L
Sbjct: 109 VDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLK 168
Query: 481 AAFQYFDKDGSGYITVDELQQ--------------ACAEHNMTDVLLEDIIREVDQDNDG 526
AF +D + G IT +E+ + +E +++D++ DG
Sbjct: 169 WAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDG 228
Query: 527 RIDYGEFVAMMQK 539
+ EF+ QK
Sbjct: 229 VVTIDEFLETCQK 241
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 3e-39
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 28/168 (16%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
S+ + L F+A+D + G ++ +L+ + L D ++++ D S +
Sbjct: 23 FSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGD----RIIESFFPDGSQRV 78
Query: 459 DYGEFIAATVHLNKLE-----------------REEHLVAAFQYFDKDGSGYITVDELQQ 501
D+ F+ H +E R L AFQ +D D G I+ E+ Q
Sbjct: 79 DFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQ 138
Query: 502 ACAE---HNMTDVLLEDI----IREVDQDNDGRIDYGEFVAMMQKGNV 542
+T+ LE+I ++E D+D DG + + EF ++K +V
Sbjct: 139 VLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDV 186
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 2e-10
Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 13/114 (11%)
Query: 378 LKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR-YGS 436
L F + L F+ D D G I+ E+ LR G
Sbjct: 87 LAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV 146
Query: 437 TLKDTEIRDLMDA----ADVDNSGTIDYGEFIAA--------TVHLNKLEREEH 478
+ + ++ ++ D AD D G + + EF + + + L+ H
Sbjct: 147 QVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKMSIRILKHHHH 200
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 3e-39
Identities = 21/170 (12%), Positives = 48/170 (28%), Gaps = 25/170 (14%)
Query: 394 VIAESLSEEEIAGLKEMFKAM-DTDNSGAITFDELKAGLRRYGSTLK------------- 439
+ A LS+ + + +F D ++ G I +D+ + +++ +
Sbjct: 1 MAAHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARA 60
Query: 440 --DTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLV--------AAFQYFDK 488
L AD + + E++ + +E+ E L F D
Sbjct: 61 TLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDT 120
Query: 489 DGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
G I E + + + + + F +
Sbjct: 121 SGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFARLWT 170
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 2e-14
Identities = 16/124 (12%), Positives = 35/124 (28%), Gaps = 11/124 (8%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE---------IRDL 446
+ K D + +T +E +++ E + +
Sbjct: 55 HNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFM 114
Query: 447 MDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH 506
D D ID E+ + + AAF G +T + + E+
Sbjct: 115 FDVNDTSGDNIIDKHEYSTVYMSYGI--PKSDCDAAFDTLSDGGKTMVTREIFARLWTEY 172
Query: 507 NMTD 510
+++
Sbjct: 173 FVSN 176
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 5e-14
Identities = 15/89 (16%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Query: 378 LKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST 437
+++ M + + ESL E + MF DT I E YG
Sbjct: 83 KEEWLKMWA-ECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG-- 139
Query: 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAA 466
+ ++ D + F
Sbjct: 140 IPKSDCDAAFDTLSDGGKTMVTREIFARL 168
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 5e-39
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 38/289 (13%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
RD Y L +G G + A K I+ K + ++++ +EIQ M
Sbjct: 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQAMSQCH 71
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV--EA 215
H NIV+ ++ + +VM+L +GG + D I E K+ L + + E
Sbjct: 72 -HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 216 C------HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-------- 261
H G +HRD+K N LL +D S++ DFG+S + T
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVS-----AFLATGGDITRNKV 182
Query: 262 ---VVGSPYYVAPEVL--LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG 316
VG+P ++APEV+ ++ Y +AD+W+ G+ L +G P+ + L+
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 242
Query: 317 ------HIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ + S + +I L P +R TA E+L H +
Sbjct: 243 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 8e-39
Identities = 72/286 (25%), Positives = 124/286 (43%), Gaps = 46/286 (16%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
+++ + +LG G FG Y TG A K I S E++ED EI+I+
Sbjct: 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE---TKSEEELEDYIVEIEILATCD 74
Query: 158 GHKNIVTIKGAY--EDSLCVHIVMELCAGGELFDRIIQRGHY-SERKAAELTRIIVGVVE 214
H IV + GAY + L I++E C GG + +++ +E + + R ++ +
Sbjct: 75 -HPYIVKLLGAYYHDGKLW--IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN 131
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF------TDVVGSPYY 268
HS ++HRDLK N L+ + ++ DFG+S + +G+PY+
Sbjct: 132 FLHSKRIIHRDLKAGNVLM---TLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYW 183
Query: 269 VAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFE 321
+APEV++ Y +AD+W+ G+ L + PP + + I
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL------KIAKS 237
Query: 322 SDP-------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360
P W S +D ++ L P R +A ++L HP++
Sbjct: 238 DPPTLLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 280
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 2e-38
Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 29/186 (15%)
Query: 382 SAMNKLKKMALRVIAES--LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLK 439
A L+ L I + S +I L F ++D +G ++ ++ + + L
Sbjct: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLG 63
Query: 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLE----------------REEHLVAAF 483
D +++A + +++ F+ H +E R L AF
Sbjct: 64 D----RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAF 119
Query: 484 QYFDKDGSGYITVDELQQACAEH---NMTDVLLEDI----IREVDQDNDGRIDYGEFVAM 536
+ +D D I+ DEL Q N++D L I I+E DQD D I + EFV +
Sbjct: 120 RLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKV 179
Query: 537 MQKGNV 542
++K +V
Sbjct: 180 LEKVDV 185
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 5e-38
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR----EDVEDVRREIQIMHHLA 157
+++G+G FG + + A KS+ E ++ +RE+ IM +L
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC- 216
H NIV + G + +VME G+L+ R++ + H K + R+++ +
Sbjct: 82 -HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIE 136
Query: 217 --HSLG--VMHRDLKPENFLLVNKD--DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVA 270
+ ++HRDL+ N L + D K DFGLS + ++G+ ++A
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV--HSVSGLLGNFQWMA 194
Query: 271 PEVLL---KHYGPEADVWTAGVILYILLSGVPPF 301
PE + + Y +AD ++ +ILY +L+G PF
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 6e-38
Identities = 58/77 (75%), Positives = 67/77 (87%)
Query: 393 RVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADV 452
+ +AE LSEEEI GLKE+FK +DTDNSG ITFDELK GL+R GS L ++EI+DLMDAAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 453 DNSGTIDYGEFIAATVH 469
D SGTIDYGEFIAATVH
Sbjct: 71 DKSGTIDYGEFIAATVH 87
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 98.0 bits (245), Expect = 4e-25
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 453 DNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTD 510
+SG ID + A L++ E L F+ D D SG IT DEL+ + +
Sbjct: 1 HSSGHIDDDDKHMAE-RLSEEEIGG-LKELFKMIDTDNSGTITFDELKDGLKRVGSELME 58
Query: 511 VLLEDIIREVDQDNDGRIDYGEFVAMM 537
++D++ D D G IDYGEF+A
Sbjct: 59 SEIKDLMDAADIDKSGTIDYGEFIAAT 85
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 8e-38
Identities = 75/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%)
Query: 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
T +++ + KLG+G +G+ Y TG A K + D++++ +EI IM
Sbjct: 24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP-----VESDLQEIIKEISIM 78
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHY-SERKAAELTRIIVGV 212
++V G+Y + + IVME C G + D I R +E + A + + +
Sbjct: 79 QQCD-SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG 137
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF------TDVVGSP 266
+E H + +HRD+K N LL + + K DFG++ GQ+ V+G+P
Sbjct: 138 LEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVA-----GQLTDTMAKRNTVIGTP 189
Query: 267 YYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFE-SD 323
+++APEV+ + Y AD+W+ G+ + G PP+ + IF F +
Sbjct: 190 FWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPE 249
Query: 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
W SD+ D +++ L P +R TA ++L HP++
Sbjct: 250 LW---SDNFTDFVKQCLVKSPEQRATATQLLQHPFV 282
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 1e-37
Identities = 79/298 (26%), Positives = 123/298 (41%), Gaps = 51/298 (17%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED--VR----REIQI 152
+ Y K+G+G +G + C TG A K E +D ++ REI++
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-------LESEDDPVIKKIALREIRM 55
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSERKAAELTRIIV 210
+ L H N+V + + +H+V E C DR + E +T +
Sbjct: 56 LKQLK-HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR--YQRGVPEHLVKSITWQTL 112
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYV 269
V CH +HRD+KPEN +L+ K +K DFG + + P + D V + +Y
Sbjct: 113 QAVNFCHKHNCIHRDVKPEN-ILITKHSV--IKLCDFGFARLLTGPSDYYDDEVATRWYR 169
Query: 270 APEVLL--KHYGPEADVWTAGVILYILLSGVPPFWA--ETQQ--GIF-------DAVLKG 316
+PE+L+ YGP DVW G + LLSGVP + + Q I +
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV 229
Query: 317 HIDFE----------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
+ +P IS A L++ L P+ERLT ++L HP+
Sbjct: 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 1e-37
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Query: 435 GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYI 494
L +I + + + + +Y F + +K + + F D+D SG+I
Sbjct: 4 TDILSAKDIESALSS--CQAADSFNYKSFFSTVGLSSK--TPDQIKKVFGILDQDKSGFI 59
Query: 495 TVDELQQACAEHNM-----TDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
+ELQ + T + + D D DG+I EF ++++
Sbjct: 60 EEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 2e-16
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Query: 379 KQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGS-- 436
K F + L + ++ +K++F +D D SG I +EL+ L+ + S
Sbjct: 28 KSFFSTVGLSSK---------TPDQ---IKKVFGILDQDKSGFIEEEELQLFLKNFSSSA 75
Query: 437 -TLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
L E + + A D D G I EF +
Sbjct: 76 RVLTSAETKAFLAAGDTDGDGKIGVEEFQS 105
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 1e-37
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 40/284 (14%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
DL LG ++G+G +G+ +G A K I R + ++ + + ++ ++ +
Sbjct: 23 DLKDLG-EIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSD 79
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA---AELTRIIVGVVEA 215
IV GA I MEL + FD+ + + L +I + V+A
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKA 137
Query: 216 CHSL----GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF-----TDVVGSP 266
+ L ++HRD+KP N +L+++ + K DFG+S GQ+ T G
Sbjct: 138 LNHLKENLKIIHRDIKPSN-ILLDRSGNI--KLCDFGIS-----GQLVDSIAKTRDAGCR 189
Query: 267 YYVAPEVL-----LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI--- 318
Y+APE + + Y +DVW+ G+ LY L +G P+ +FD + +
Sbjct: 190 PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSVFDQLT--QVVKG 245
Query: 319 ---DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ S S + + L S+R E+L HP+I
Sbjct: 246 DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 3e-37
Identities = 67/287 (23%), Positives = 112/287 (39%), Gaps = 42/287 (14%)
Query: 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
DL + LG+G +G + +G A K I R ++ ++ + + ++ I
Sbjct: 4 VKADDLEPIME-LGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISM 60
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE--LTRIIVGV 212
VT GA V I MEL D+ ++ + E L +I V +
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMELMDTS--LDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 213 VEACHSL----GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF-----TDVV 263
V+A L V+HRD+KP N +L+N K DFG+S G +
Sbjct: 119 VKALEHLHSKLSVIHRDVKPSN-VLINALGQV--KMCDFGIS-----GYLVDDVAKDIDA 170
Query: 264 GSPYYVAPEVLL-----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI 318
G Y+APE + K Y ++D+W+ G+ + L P+ ++ F + +
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY--DSWGTPFQQLK--QV 226
Query: 319 ------DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+D + S D + L ER T E++ HP+
Sbjct: 227 VEEPSPQLPADKF---SAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 3e-37
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 385 NKLKKMALRVIAES--LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE 442
+KL+ ++ + ES +E EI + F SG ++ +E K + ++
Sbjct: 6 SKLRPEVMQDLLESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASK 63
Query: 443 IRD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQ 501
+ + D + GTID+ EFI A ++ + E+ L AF +D DG+GYI+ E+ +
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 123
Query: 502 A--------------CAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ + + E I R++D + DG++ EF+ +
Sbjct: 124 IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 175
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 5e-37
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 402 EEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYG 461
++E F+ D DN G ++ +EL + LR G + E+ + + D
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAK---EFDLA 58
Query: 462 EF--IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDII 517
F + E+ + ++ AF+ DK+G+G I EL+Q +T +E+++
Sbjct: 59 TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELM 118
Query: 518 REVDQDNDGRIDYGEFVAMMQKGN 541
+EV DG I+Y FV M+ G
Sbjct: 119 KEVSVSGDGAINYESFVDMLVTGY 142
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 8e-15
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA 449
+ + +E+ + F+A+D + +G I EL+ L G L +E+ +LM
Sbjct: 64 YRKPIKTPTEQSKEM---LDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKE 120
Query: 450 ADVDNSGTIDYGEFI 464
V G I+Y F+
Sbjct: 121 VSVSGDGAINYESFV 135
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 5e-37
Identities = 82/294 (27%), Positives = 125/294 (42%), Gaps = 43/294 (14%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED-----VRREIQIM 153
Y LG+GQF T Y + T A K I KL R + +D REI+++
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLL 66
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSERKAAELTRIIVG 211
L+ H NI+ + A+ + +V + + S KA + +
Sbjct: 67 QELS-HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKA--YMLMTLQ 123
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVA 270
+E H ++HRDLKP N LL D++ LK DFGL+ F P + +T V + +Y A
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA 180
Query: 271 PEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAET--QQ--GIFDAV----------- 313
PE+L + YG D+W G IL LL VP ++ Q IF+ +
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240
Query: 314 --LKGHIDFESDP-------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
L ++ F+S P + D DLI+ + P R+TA + L +
Sbjct: 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 6e-37
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 399 LSEEEIAGLKEMFKAMD--TDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSG 456
LS++EI LK++F+ D GA+ +L R G ++ ++ +
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGT-HKMGEK 61
Query: 457 TIDYGEFIAATVHLNKLER--EEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVL 512
++ + EF+ A L E+ + AF+ FD++G G+I+ EL+ ++D
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 121
Query: 513 LEDIIREVD--QDNDGRIDYGEFVAMM 537
+++II+ D +D +G + Y +FV +
Sbjct: 122 VDEIIKLTDLQEDLEGNVKYEDFVKKV 148
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 3e-13
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA 449
+ E + + E FK D + G I+ EL+ L G L D ++ +++
Sbjct: 72 YEGLMDCEQGTFADY---MEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 128
Query: 450 ADV--DNSGTIDYGEFI 464
D+ D G + Y +F+
Sbjct: 129 TDLQEDLEGNVKYEDFV 145
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 7e-11
Identities = 9/62 (14%), Positives = 21/62 (33%), Gaps = 5/62 (8%)
Query: 482 AFQYFD--KDGSGYITVDELQQA--CAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
F+ FD G + +L C N + + + + + + + EF+
Sbjct: 14 VFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAY 72
Query: 538 QK 539
+
Sbjct: 73 EG 74
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 139 bits (351), Expect = 1e-36
Identities = 69/307 (22%), Positives = 116/307 (37%), Gaps = 57/307 (18%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
D + +LG G G + + +G+ A K I I + RE+Q++H
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECN- 89
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
IV GA+ + I ME GG L + + G E+ +++ ++ +
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 219 -LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV----VGSPYYVAPEV 273
+MHRD+KP N +LVN + K DFG+S GQ+ + VG+ Y++PE
Sbjct: 150 KHKIMHRDVKPSN-ILVNSRGEI--KLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 201
Query: 274 LL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL------------------ 314
L HY ++D+W+ G+ L + G P + +
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261
Query: 315 --KGHIDFESDPWPLI--------------------SDSAKDLIRKMLCSQPSERLTAHE 352
+S P I S +D + K L P+ER +
Sbjct: 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQ 321
Query: 353 VLCHPWI 359
++ H +I
Sbjct: 322 LMVHAFI 328
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-36
Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 403 EIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA-ADVDNSGTIDYG 461
K++F D GAI D L LR G + ++D+++A + + ++ ++
Sbjct: 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLD 61
Query: 462 EF--IAATVHLNK----LEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL 513
+ + + E V AFQ FDK+ +G ++V +L+ +TD +
Sbjct: 62 QITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV 121
Query: 514 EDIIREVDQDNDGRIDYGEFVAMMQK 539
+++++ V+ D++G IDY +F+ + +
Sbjct: 122 DELLKGVEVDSNGEIDYKKFIEDVLR 147
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 2e-14
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 388 KKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLM 447
E+ + F+ D +++G ++ +L+ L G L D E+ +L+
Sbjct: 69 VNEKELDATTKAKTED---FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 125
Query: 448 DAADVDNSGTIDYGEFI 464
+VD++G IDY +FI
Sbjct: 126 KGVEVDSNGEIDYKKFI 142
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-36
Identities = 23/144 (15%), Positives = 56/144 (38%), Gaps = 9/144 (6%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
EE++ + + G I+ D R+ G + + + + +
Sbjct: 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYG----DNL 64
Query: 459 DYGEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLED 515
Y +++ ++ ++ + E L+ F +FD + +GY+T +++ +TD D
Sbjct: 65 TYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAID 124
Query: 516 IIREVDQDNDGRIDYGEFVAMMQK 539
+ ++ IDY F + +
Sbjct: 125 ALNAF--SSEDNIDYKLFCEDILQ 146
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 1e-36
Identities = 72/310 (23%), Positives = 123/310 (39%), Gaps = 47/310 (15%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMH 154
+ Y +G+G +G C TG A K K + +D + V+ REI+++
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK-----KFLESDDDKMVKKIAMREIKLLK 79
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSERKAAELTRIIVGV 212
L H+N+V + + ++V E + + + + I+
Sbjct: 80 QLR-HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF--PNGLDYQVVQKYLFQIING 136
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAP 271
+ CHS ++HRD+KPEN +LV++ +K DFG + PG+++ D V + +Y AP
Sbjct: 137 IGFCHSHNIIHRDIKPEN-ILVSQSGV--VKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
Query: 272 EVLL--KHYGPEADVWTAGVILYILLSGVPPFWA--ETQQ--GIFDAV------------ 313
E+L+ YG DVW G ++ + G P F + Q I +
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN 253
Query: 314 -LKGHIDFESDPW----------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362
P +S+ DL +K L P +R E+L H + +
Sbjct: 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313
Query: 363 GVAPDRSLDP 372
G A S +
Sbjct: 314 GFAERFSQEL 323
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 3e-36
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD--NSG 456
S+ KE F D IT ++ R G + EI ++ + N+
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61
Query: 457 TIDYGEF--IAATVHLNK-LEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDV 511
I + EF + NK E V + FDK+G+G + EL+ A MT+
Sbjct: 62 AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEE 121
Query: 512 LLEDIIREVDQDNDGRIDYGEFVAMM 537
+E++++ + D++G I+Y FV +
Sbjct: 122 EVEELMKGQE-DSNGCINYEAFVKHI 146
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 65.2 bits (160), Expect = 7e-13
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 482 AFQYFDKDGSGYITVDELQQA--CAEHNMTDVLLEDIIREVDQD--NDGRIDYGEFVAMM 537
AF FD+ G IT ++ N T+ + I+ ++ N I + EF+ M+
Sbjct: 13 AFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPML 72
Query: 538 QK 539
Q
Sbjct: 73 QA 74
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 4e-36
Identities = 79/298 (26%), Positives = 123/298 (41%), Gaps = 48/298 (16%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED------VRREIQI 152
D Y KLG+G +G Y + T A K I R + E+ RE+ +
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI-------RLEHEEEGVPGTAIREVSL 86
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGV 212
+ L H+NI+ +K + +H++ E +L + + S R ++
Sbjct: 87 LKELQ-HRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLING 144
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFS---LKAIDFGLSVFF-KPGQIFTDVVGSPYY 268
V CHS +HRDLKP+N LL++ D LK DFGL+ F P + FT + + +Y
Sbjct: 145 VNFCHSRRCLHRDLKPQN-LLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWY 203
Query: 269 VAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQG----IF-------DAVLK 315
PE+LL +HY D+W+ I +L P F +++ IF D
Sbjct: 204 RPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP 263
Query: 316 GH---------------IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
G + L+ D DL+ ML P +R++A L HP+
Sbjct: 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 5e-36
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD--NSG 456
+++++ KE F+ D G I + + +R G + E+ ++ D S
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63
Query: 457 TIDYGEFI---AATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDV 511
+D+ F+ A E + F+ FDK+G+G + EL+ MT+
Sbjct: 64 RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEE 123
Query: 512 LLEDIIREVDQDNDGRIDYGEFVAMM 537
+E ++ +D++G I+Y F+ +
Sbjct: 124 EVETVLAG-HEDSNGCINYEAFLKHI 148
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 2e-12
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 482 AFQYFDKDGSGYITVDELQQA--CAEHNMTDVLLEDIIREVDQD--NDGRIDYGEFVAMM 537
AF+ FD+ G G I + N T+ + ++ D R+D+ F+ M+
Sbjct: 15 AFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPML 74
Query: 538 QK 539
Q
Sbjct: 75 QA 76
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 6e-36
Identities = 35/174 (20%), Positives = 75/174 (43%), Gaps = 19/174 (10%)
Query: 383 AMNKLKKMALRVIAES--LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKD 440
+ +KL + L+ + S ++E+ + F SG + E + +++
Sbjct: 4 SQSKLSQDQLQDLVRSTRFDKKELQQWYKGFF--KDCPSGHLNKSEFQKIYKQFFPFGDP 61
Query: 441 TEIRD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDEL 499
+ + + + D D +G ID+ EFI A ++ E + L+ AFQ +D D +G I+ DE+
Sbjct: 62 SAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEM 121
Query: 500 QQ--------------ACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ + + + + I +D++ DG++ EF ++
Sbjct: 122 LRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR 175
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-35
Identities = 30/145 (20%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
++ ++ KE F+ +D D G I+ ++++A G + E+ ++ + G I
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVA----EAPGPI 106
Query: 459 DYGEFIA-ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLED 515
++ F+ + + E+ +V AF FD +G G + L+++ + ++
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQ 165
Query: 516 IIREVDQDNDGRIDYGEFVAMMQKG 540
+ E D +G ID +F ++ KG
Sbjct: 166 ALSEAPIDGNGLIDIKKFAQILTKG 190
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 4e-12
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA 449
+ IA + E+ I F D + G + LK L +G E+ +
Sbjct: 114 IFGDRIAGTDEEDVI---VNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSE 169
Query: 450 ADVDNSGTIDYGEFIA 465
A +D +G ID +F
Sbjct: 170 APIDGNGLIDIKKFAQ 185
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 3e-35
Identities = 78/297 (26%), Positives = 126/297 (42%), Gaps = 50/297 (16%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED------VRREIQI 152
Y K+G+G +GT + T A K + R D +D REI +
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREICL 54
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSERKAAELTRIIV 210
+ L HKNIV + + +V E C + FD K+ ++
Sbjct: 55 LKELK-HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKS--FLFQLL 111
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYV 269
+ CHS V+HRDLKP+N LL+N++ + LK +FGL+ F P + ++ V + +Y
Sbjct: 112 KGLGFCHSRNVLHRDLKPQN-LLINRNGE--LKLANFGLARAFGIPVRCYSAEVVTLWYR 168
Query: 270 APEVLL--KHYGPEADVWTAGVILYILLSGVPPFWA---ETQQ--GIF-------DAVLK 315
P+VL K Y D+W+AG I L + P + Q IF +
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228
Query: 316 GHI---DFESDP-----------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
D++ P P ++ + +DL++ +L P +R++A E L HP+
Sbjct: 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 3e-35
Identities = 65/259 (25%), Positives = 108/259 (41%), Gaps = 28/259 (10%)
Query: 102 TLGRKLGQGQFGTTYLCTEIAT--GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH 159
+ K+G G FGT + A G + A K + ++ E V + RE+ IM L H
Sbjct: 40 NIKEKIGAGSFGTVHR----AEWHGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLR-H 93
Query: 160 KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC--- 216
NIV GA + IV E + G L+ + + G + + V +
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 217 HSLG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVAPEV 273
H+ ++HR+LK N L+ D +++K DFGLS + G+P ++APEV
Sbjct: 154 HNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV 210
Query: 274 LL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332
L + ++DV++ GVIL+ L + P+ + AV I +
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR------LEIPRNL 264
Query: 333 ----KDLIRKMLCSQPSER 347
+I ++P +R
Sbjct: 265 NPQVAAIIEGCWTNEPWKR 283
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 3e-35
Identities = 86/321 (26%), Positives = 134/321 (41%), Gaps = 75/321 (23%)
Query: 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI 152
++ D + + R GQG FGT L E +TG+ A K + +D RE+QI
Sbjct: 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-------IQDPRFRNRELQI 69
Query: 153 MHHLA--GHKNIVTIKGAY-------EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAA 203
M LA H NIV ++ + + +++VME + R + +Y R+
Sbjct: 70 MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV--PDTLHRCCR--NYYRRQV- 124
Query: 204 ELTRIIVGV--------VEACH--SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253
I++ V + H S+ V HRD+KP N +LVN+ D +LK DFG +
Sbjct: 125 APPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHN-VLVNEAD-GTLKLCDFGSAKKL 182
Query: 254 KPGQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQG--- 308
P + + S YY APE++ +HY D+W+ G I ++ G P F +G
Sbjct: 183 SPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF-----RGDNS 237
Query: 309 ------IFDAVL----KGHIDF-------------ESDPW--------PLISDSAKDLIR 337
I VL + + + PW + A DL+
Sbjct: 238 AGQLHEIVR-VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLS 296
Query: 338 KMLCSQPSERLTAHEVLCHPW 358
+L P ER+ +E LCHP+
Sbjct: 297 ALLQYLPEERMKPYEALCHPY 317
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 4e-35
Identities = 73/296 (24%), Positives = 118/296 (39%), Gaps = 49/296 (16%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED-----VRREIQIM 153
+ Y KLG+G + T Y T A K I R + E+ RE+ ++
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI-------RLEHEEGAPCTAIREVSLL 54
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSERKAAELTRIIVG 211
L H NIVT+ + +V E + D + K ++
Sbjct: 55 KDLK-HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKL--FLFQLLR 111
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYVA 270
+ CH V+HRDLKP+N LL+N+ + LK DFGL+ P + + + V + +Y
Sbjct: 112 GLAYCHRQKVLHRDLKPQN-LLINERGE--LKLADFGLARAKSIPTKTYDNEVVTLWYRP 168
Query: 271 PEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQG----IF-------DAVLKGH 317
P++LL Y + D+W G I Y + +G P F T + IF + G
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 228
Query: 318 IDFE---------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
+ E P + DL+ K+L + R++A + + HP+
Sbjct: 229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 9e-35
Identities = 73/317 (23%), Positives = 115/317 (36%), Gaps = 54/317 (17%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED-----VRREIQIM 153
+ KLG G + T Y TG+ A K + + D E+ REI +M
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-------KLDSEEGTPSTAIREISLM 57
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGG-----ELFDRIIQRGHYSERKAAELTRI 208
L H+NIV + + +V E +
Sbjct: 58 KELK-HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 209 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPY 267
++ + CH ++HRDLKP+N LL+NK LK DFGL+ F P F+ V + +
Sbjct: 117 LLQGLAFCHENKILHRDLKPQN-LLINKRGQ--LKLGDFGLARAFGIPVNTFSSEVVTLW 173
Query: 268 YVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQG----IF-------DAVL 314
Y AP+VL+ + Y D+W+ G IL +++G P F + IF +++
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 315 KGHID-------------------FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355
+ + + D + +L P RL+A + L
Sbjct: 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293
Query: 356 HPWICENGVAPDRSLDP 372
HPW E
Sbjct: 294 HPWFAEYYHHASMGGSR 310
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 2e-34
Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 18/146 (12%)
Query: 402 EEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT--------EIRDLMDAADVD 453
EE+ + +F + D+ ++ EL L + + D R ++ D D
Sbjct: 1 EEVRQFRRLFAQLAGDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 454 NSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDV 511
+G + + EF ++ K + A ++ FD D SG I EL A ++ +
Sbjct: 60 TTGKLGFEEFKYLWNNIKKWQ------AIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH 113
Query: 512 LLEDIIREVDQDNDGRIDYGEFVAMM 537
L IIR D G +D+ F++ +
Sbjct: 114 LYSMIIR-RYSDEGGNMDFDNFISCL 138
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 1e-22
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 402 EEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYG 461
I + ++K D D SG I EL G L + + ++ D G +D+
Sbjct: 74 NNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNE-HLYSMIIRRYSDEGGNMDFD 132
Query: 462 EFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
FI+ V L + + AF+ DKDG+G I V+ +
Sbjct: 133 NFISCLVRL------DAMFRAFKSLDKDGTGQIQVNIQE 165
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 5e-08
Identities = 11/76 (14%), Positives = 22/76 (28%), Gaps = 11/76 (14%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLE----------DIIREVDQD 523
E F D ++ EL + L+ ++ +D D
Sbjct: 1 EEVRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 524 NDGRIDYGEFVAMMQK 539
G++ + EF +
Sbjct: 60 TTGKLGFEEFKYLWNN 75
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 129 bits (328), Expect = 3e-34
Identities = 80/296 (27%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED------VRREIQI 152
+ Y K+G+G +G Y G FA K I R + ED REI I
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKI-------RLEKEDEGIPSTTIREISI 53
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSERKAAELTRIIV 210
+ L H NIV + + +V E +L D K+ ++
Sbjct: 54 LKELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKS--FLLQLL 110
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYV 269
+ CH V+HRDLKP+N LL+N++ + LK DFGL+ F P + +T + + +Y
Sbjct: 111 NGIAYCHDRRVLHRDLKPQN-LLINREGE--LKIADFGLARAFGIPVRKYTHEIVTLWYR 167
Query: 270 APEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQG----IFDAV---------- 313
AP+VL+ K Y D+W+ G I +++G P F ++ IF +
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 314 ---LKG-HIDFESDP-------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
L +F + +S DL+ KML P++R+TA + L H +
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 4e-34
Identities = 70/306 (22%), Positives = 119/306 (38%), Gaps = 45/306 (14%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR-----REIQIM 153
Y ++G G +GT Y + +G A KS+ ++ + RE+ ++
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGGGGGGGLPISTVREVALL 65
Query: 154 HHL--AGHKNIVTIK-----GAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSERKAAE 204
L H N+V + + + V +V E D+ G +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKD 124
Query: 205 LTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264
L R + ++ H+ ++HRDLKPEN +LV +K DFGL+ + T VV
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPEN-ILVTSGGT--VKLADFGLARIYSYQMALTPVVV 181
Query: 265 SPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQG----IF-------DA 312
+ +Y APEVLL Y D+W+ G I + P F ++ IF +
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241
Query: 313 VLKGHI---DFESDPW---------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360
+ P P + +S L+ +ML P +R++A L H ++
Sbjct: 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301
Query: 361 ENGVAP 366
++ P
Sbjct: 302 KDEGNP 307
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 5e-34
Identities = 53/323 (16%), Positives = 101/323 (31%), Gaps = 72/323 (22%)
Query: 99 DLYTLGRKLGQGQ--FGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL 156
Y L +G+G T L TG + I+ S E V ++ E+ +
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHVSKLF 83
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFD--RIIQRGHYSERKAAELTRIIVGVVE 214
H NIV + + + +V A G D +E A + + ++ ++
Sbjct: 84 N-HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALD 142
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF-------------TD 261
H +G +HR +K + L+ D + + +
Sbjct: 143 YIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSN-----LSMISHGQRQRVVHDFPKY 194
Query: 262 VVGSPYYVAPEVL---LKHYGPEADVWTAGVILYILLSGVPPF----------------- 301
V +++PEVL L+ Y ++D+++ G+ L +G PF
Sbjct: 195 SVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTV 254
Query: 302 -------------------WAETQQGIFDAVLKGHIDFESDPWPLI------SDSAKDLI 336
+ G+ D++ + P S +
Sbjct: 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFV 314
Query: 337 RKMLCSQPSERLTAHEVLCHPWI 359
+ L P R +A +L H +
Sbjct: 315 EQCLQRNPDARPSASTLLNHSFF 337
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 7e-34
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 35/264 (13%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGI---EFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
T+G+++G G FGT Y G + A K + + + ++ + E+ ++
Sbjct: 27 TVGQRIGSGSFGTVYK------GKWHGDVAVKML-NVTAPTPQQLQAFKNEVGVLRKTR- 78
Query: 159 HKNIVTIKGA-YEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC- 216
H NI+ G L IV + C G L+ + H SE K I + A
Sbjct: 79 HVNILLFMGYSTAPQLA--IVTQWCEGSSLYHHL----HASETKFEMKKLIDIARQTARG 132
Query: 217 ----HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS---VFFKPGQIFTDVVGSPYYV 269
H+ ++HRDLK N L +D ++K DFGL+ + F + GS ++
Sbjct: 133 MDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 270 APEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFESDP 324
APEV+ Y ++DV+ G++LY L++G P+ + I + V +G + +
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 249
Query: 325 WPLISDSA-KDLIRKMLCSQPSER 347
K L+ + L + ER
Sbjct: 250 VRSNCPKRMKRLMAECLKKKRDER 273
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 1e-33
Identities = 59/280 (21%), Positives = 106/280 (37%), Gaps = 48/280 (17%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGI---EFACKSISKRKLISREDVEDVRREIQIMHHLAG 158
+G +G+G+FG Y G E A + I + + + ++ +RE+
Sbjct: 36 EIGELIGKGRFGQVYH------GRWHGEVAIRLI-DIERDNEDQLKAFKREVMAYRQTR- 87
Query: 159 HKNIVTIKGA--YEDSLCVHIVMELCAGGELFDRI-IQRGHYSERKAAELTRIIVGVVEA 215
H+N+V GA L I+ LC G L+ + + K ++ + IV +
Sbjct: 88 HENVVLFMGACMSPPHLA--IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGY 145
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI------FTDVVGSPYYV 269
H+ G++H+DLK +N D+ + DFGL Q G ++
Sbjct: 146 LHAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHL 201
Query: 270 APEVL----------LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID 319
APE++ + +DV+ G I Y L + PF + + I + G
Sbjct: 202 APEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMK- 260
Query: 320 FESDPWPLISDSA-----KDLIRKMLCSQPSERLTAHEVL 354
P +S D++ + ER T +++
Sbjct: 261 ------PNLSQIGMGKEISDILLFCWAFEQEERPTFTKLM 294
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-33
Identities = 79/358 (22%), Positives = 133/358 (37%), Gaps = 85/358 (23%)
Query: 87 YY--VLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE 144
Y+ G + R Y L RKLG G F T +L ++ A K I + + E E
Sbjct: 7 YHPAFKGEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMK-IVRGDKVYTEAAE 63
Query: 145 DVRREIQIMHHL----------AGHKNIV------TIKGAYEDSLCVHIVMELCAGGELF 188
D EI+++ + G +I+ KG + +V E+ G L
Sbjct: 64 D---EIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVV--MVFEVL-GENLL 117
Query: 189 DRIIQRGH--YSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDD---DFSL 242
I + H ++++ ++ ++ H G++H D+KPEN L+ D +
Sbjct: 118 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQI 177
Query: 243 KAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPF 301
K D G + + + +T+ + + Y +PEVLL +G AD+W+ +++ L++G F
Sbjct: 178 KIADLGNACW--YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
Query: 302 WAETQQGIFDAV--------LKGHID-------------FESD----------PWPLISD 330
+ L G + F S WPL
Sbjct: 236 EPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDV 295
Query: 331 SAK-------------DLIRKMLCSQPSERLTAHEVLCHPWI-----CENGVAPDRSL 370
+ D + ML P +R A ++ HPW+ E PDR L
Sbjct: 296 LTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDREL 353
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 3e-33
Identities = 39/219 (17%), Positives = 83/219 (37%), Gaps = 28/219 (12%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIAT--GIEFACKSISKRKLISREDVEDVRREIQIM 153
+ + L KL + G + G + K + R +R+ D E +
Sbjct: 8 DFKQL-NFLTKLNENHSGELWK----GRWQGNDIVVKVLKVRDWSTRK-SRDFNEECPRL 61
Query: 154 HHLAGHKNIVTIKGAYEDSLCVH--IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
+ H N++ + GA + H ++ G L++ ++ G ++ + +
Sbjct: 62 RIFS-HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYN-VLHEGTNFVVDQSQAVKFALD 119
Query: 212 VVEAC---HSLG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSP 266
+ H+L + L + ++ D+D + + + F+ + +P
Sbjct: 120 MARGMAFLHTLEPLIPRHALNSRSVMI---DEDMTARISMADVKFSFQ----SPGRMYAP 172
Query: 267 YYVAPEVLLK----HYGPEADVWTAGVILYILLSGVPPF 301
+VAPE L K AD+W+ V+L+ L++ PF
Sbjct: 173 AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 3e-33
Identities = 80/297 (26%), Positives = 123/297 (41%), Gaps = 51/297 (17%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED------VRREIQI 152
+ Y K+G+G +G Y + + G A K I R D ED REI +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRI-------RLDAEDEGIPSTAIREISL 72
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSERKAAELTRIIV 210
+ L H NIV++ C+ +V E ++ D S+ K ++
Sbjct: 73 LKELH-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI--YLYQLL 129
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-VFFKPGQIFTDVVGSPYYV 269
V CH ++HRDLKP+N LL+N D LK DFGL+ F P + +T V + +Y
Sbjct: 130 RGVAHCHQHRILHRDLKPQN-LLINSDGA--LKLADFGLARAFGIPVRSYTHEVVTLWYR 186
Query: 270 APEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQG----IF-------DAVLKG 316
AP+VL+ K Y D+W+ G I +++G P F T IF
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246
Query: 317 HI---DFESDP------------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
++ P DL+ MLC P++R++A + + HP+
Sbjct: 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 6e-33
Identities = 77/341 (22%), Positives = 130/341 (38%), Gaps = 96/341 (28%)
Query: 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSI---SKRKLISREDVEDVRREIQ 151
+ Y+LG+ LG G FG +I +G FA K + + K RE+
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN----------RELD 52
Query: 152 IMHHLAGHKNIVTIK--------------------------------------GAYEDSL 173
IM L H NI+ + +
Sbjct: 53 IMKVLD-HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNK 111
Query: 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGV--------VEACHSLGVMHRD 225
++++ME + ++++ + + ++ + V HSLG+ HRD
Sbjct: 112 YLNVIMEYV--PDTLHKVLK--SFIRSGR-SIPMNLISIYIYQLFRAVGFIHSLGICHRD 166
Query: 226 LKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL--KHYGPEAD 283
+KP+N LLVN D+ +LK DFG + P + + S +Y APE++L Y P D
Sbjct: 167 IKPQN-LLVNSKDN-TLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSID 224
Query: 284 VWTAGVILYILLSGVPPFWAET--QQ--GIFDAVL----KGHIDF-------------ES 322
+W+ G + L+ G P F ET Q I ++ K + ++
Sbjct: 225 LWSIGCVFGELILGKPLFSGETSIDQLVRIIQ-IMGTPTKEQMIRMNPHYTEVRFPTLKA 283
Query: 323 DPWPLI-----SDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
W I A DL+ ++L +P R+ +E + HP+
Sbjct: 284 KDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 1e-32
Identities = 33/138 (23%), Positives = 51/138 (36%), Gaps = 16/138 (11%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLK-----DTEIRDLMDAADVDNSGTIDYG 461
L F ++ G I DEL+ L + G R ++ D D SGT+ +
Sbjct: 4 LYGYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 462 EFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIRE 519
EF LN F FD D SG + ELQ+A + + I +
Sbjct: 63 EFKELWAVLNGWR------QHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKR 116
Query: 520 VDQDNDGRIDYGEFVAMM 537
G+I + +++A
Sbjct: 117 Y--STSGKITFDDYIACC 132
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 1e-17
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 8/97 (8%)
Query: 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEF 463
+ G ++ F + D+D SG + EL+ L G L + + SG I + ++
Sbjct: 71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIA--KRYSTSGKITFDDY 128
Query: 464 IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
IA V L L +F+ D G +
Sbjct: 129 IACCVKLRALTD------SFRRRDSAQQGMVNFSYDD 159
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 9e-08
Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 9/66 (13%)
Query: 483 FQYFDK--DGSGYITVDELQQA-------CAEHNMTDVLLEDIIREVDQDNDGRIDYGEF 533
+ YF G I DELQ+ ++ +D+D G + + EF
Sbjct: 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEF 64
Query: 534 VAMMQK 539
+
Sbjct: 65 KELWAV 70
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-32
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Query: 366 PDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFD 425
D + + F+A + + L ++ +K++F +D D SG I D
Sbjct: 3 TDLLSAEDIKKAIGAFTAADSFDHKKFFQMV-GLKKKSADDVKKVFHILDKDKSGFIEED 61
Query: 426 ELKAGLRRY---GSTLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
EL + L+ + L E + LM A D D G I EF
Sbjct: 62 ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 2e-28
Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Query: 435 GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYI 494
L +I+ + A + D+ +F K + + + F DKD SG+I
Sbjct: 3 TDLLSAEDIKKAIGAFTAA--DSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFI 58
Query: 495 TVDELQQACAE-----HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
DEL +++ + ++ D+D DG+I EF ++ +
Sbjct: 59 EEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 2e-32
Identities = 21/165 (12%), Positives = 55/165 (33%), Gaps = 25/165 (15%)
Query: 399 LSEEEIAGLKEMFKAM-DTDNSGAITFDELKAGLRRYG-------STLKDTEIRDLMDA- 449
L++ + +K F D ++ G+I ++ + + RY S ++ ++
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 450 -------ADVDNSGTIDYGEFIAATVHLNKLER---------EEHLVAAFQYFDKDGSGY 493
AD++ + + E++A + + + F+ D G G
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 494 ITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
+ ++E Q C + + + + D + +
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY 166
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 2e-12
Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Query: 378 LKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST 437
+++ AM + K +A L + +FK MD G + +E + + +
Sbjct: 79 WEEYLAMWE-KTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ-- 135
Query: 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAA 466
L+ ++ + + T D +
Sbjct: 136 LQCADVPAVYNVITDGGKVTFDLNRYKEL 164
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 3e-11
Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 15/137 (10%)
Query: 382 SAMNKLKKMALRVIAESLSEEEIAGLKEMFKAM----DTDNSGAITFDELKAGLRRYGST 437
M + K++ ++++ + A L++ ++ + D + ++++E A + +T
Sbjct: 33 DMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIAT 92
Query: 438 LKDTE---------IRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDK 488
K I L DV G +D EF + + + A +
Sbjct: 93 CKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITD 150
Query: 489 DGSGYITVDELQQACAE 505
G ++ ++
Sbjct: 151 GGKVTFDLNRYKELYYR 167
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 4e-08
Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 18/84 (21%)
Query: 474 EREEHLVAAFQYF-DKDGSGYITVDELQQAC-----------------AEHNMTDVLLED 515
+++ + F +F D + G I ++ + + + D
Sbjct: 5 FQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRD 64
Query: 516 IIREVDQDNDGRIDYGEFVAMMQK 539
+ D + D + + E++AM +K
Sbjct: 65 LKGRADINKDDVVSWEEYLAMWEK 88
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 2e-32
Identities = 89/374 (23%), Positives = 149/374 (39%), Gaps = 79/374 (21%)
Query: 41 STPSLNSQQLVSQEFSKE-NPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRD 99
S P+L+ + Q F K+ + +S SK DN + + + +
Sbjct: 10 SEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKR------ 63
Query: 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSIS---------KRKLISREDVEDVRREI 150
Y + +G G G + A K +S KR RE+
Sbjct: 64 -YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY----------REL 112
Query: 151 QIMHHLAGHKNIVTIK------GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE 204
+M + HKNI+++ E+ V++VMEL L ++IQ ER +
Sbjct: 113 VLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANL-CQVIQMELDHERMSYL 169
Query: 205 LTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264
L +++ G+ + HS G++HRDLKP N ++V D LK +DFGL+ + T V
Sbjct: 170 LYQMLCGI-KHLHSAGIIHRDLKPSN-IVVKSDCT--LKILDFGLARTAGTSFMMTPYVV 225
Query: 265 SPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPF-------------------WAE 304
+ YY APEV+L Y D+W+ G I+ ++ F E
Sbjct: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285
Query: 305 TQQGI------------------FDAVLKGHIDF-ESDPWPLISDSAKDLIRKMLCSQPS 345
+ + F + + +S+ L + A+DL+ KML P+
Sbjct: 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 345
Query: 346 ERLTAHEVLCHPWI 359
+R++ + L HP+I
Sbjct: 346 KRISVDDALQHPYI 359
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 2e-32
Identities = 17/109 (15%), Positives = 38/109 (34%), Gaps = 4/109 (3%)
Query: 440 DTEIRDLMDAADVDNSGTIDYGEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDE 498
+ + ++ Y + + ++ E L F IT +
Sbjct: 2 EPTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAES 61
Query: 499 LQQACAE---HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGL 544
L++ M+ + ++RE D D DG ++ EF +M + + +
Sbjct: 62 LRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEM 110
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 4e-13
Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 4/77 (5%)
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGS-TLKDTEIRDLMD 448
+ + E L + F + IT + L+ G + + + ++
Sbjct: 28 VMAEKMDVEEFVSE---LCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR 84
Query: 449 AADVDNSGTIDYGEFIA 465
D+D G ++ EF
Sbjct: 85 EGDLDGDGALNQTEFCV 101
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 4e-04
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 387 LKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDL 446
L++ + + E +S+E+ + M + D D GA+ E + R + + L
Sbjct: 62 LRRNSGILGIEGMSKED---AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWL 118
Query: 447 MDAADVD 453
A +
Sbjct: 119 EKALTQE 125
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 3e-32
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 28/219 (12%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161
G LG+G FG T TG K + + E +E+++M L H N
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPN 68
Query: 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC---HS 218
++ G ++ + E GG L I + S+ ++ + HS
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS---------------VFFKPGQIFTDVV 263
+ ++HRDL N LV ++ ++ DFGL+ + + VV
Sbjct: 127 MNIIHRDLNSHN-CLV--RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 264 GSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPF 301
G+PY++APE++ + Y + DV++ G++L ++ V
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 6e-32
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 472 KLEREEHLVAAFQYFDKDGSGYITVDELQQACA---EHNMTDVLLEDIIREVDQDNDGRI 528
+ + EE ++ AF+ FD +G G I DE + E +TD +E+ ++E D+D +G I
Sbjct: 3 RQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVI 62
Query: 529 DYGEFVAMMQKGN 541
D EF+ +++K
Sbjct: 63 DIPEFMDLIKKSK 75
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 1e-17
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTEIRDLMDAADVDNSGT 457
+ +++ + FK D + G I FDE K +++ G L D E+ + M AD D +G
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 458 IDYGEFIA 465
ID EF+
Sbjct: 62 IDIPEFMD 69
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 8e-32
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 402 EEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYG 461
+ + K+ F D +G I + LR G EI ++ + +D
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDME 57
Query: 462 EFIAATVHLNKLE---REEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDI 516
+F+ N + E V FQ FDKD +G I V EL+ +++ ++++
Sbjct: 58 QFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDEL 117
Query: 517 IREVDQDNDGRIDYGEFVAMM 537
++ V DG ++Y +FV M+
Sbjct: 118 LKGVP-VKDGMVNYHDFVQMI 137
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 63.3 bits (155), Expect = 3e-12
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 482 AFQYFDKDGSGYITVDELQQA--CAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
AF FD+ G+G I + N T I E++ +D +F+ ++ +
Sbjct: 10 AFSLFDRHGTGRIPKTSIGDLLRACGQNPT----LAEITEIESTLPAEVDMEQFLQVLNR 65
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 62.5 bits (153), Expect = 5e-12
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTID 459
EE + F+ D D +G I EL+ L G L + E+ +L+ V + G ++
Sbjct: 74 DPEEF---VKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKD-GMVN 129
Query: 460 YGEFI 464
Y +F+
Sbjct: 130 YHDFV 134
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 1e-31
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 59/307 (19%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + +G G G + A K +S R ++ + RE+ +M + HK
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NHK 84
Query: 161 NIVTIK---------GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
NI+ + ++D V+IVMEL L ++IQ ER + L +++ G
Sbjct: 85 NIIGLLNVFTPQKSLEEFQD---VYIVMEL-MDANL-CQVIQMELDHERMSYLLYQMLCG 139
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAP 271
+ + HS G++HRDLKP N ++V D LK +DFGL+ + T V + YY AP
Sbjct: 140 I-KHLHSAGIIHRDLKPSN-IVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 272 EVLL-KHYGPEADVWTAGVILYILLSGVPPF-------------------WAETQQGI-- 309
EV+L Y D+W+ G I+ ++ G F E + +
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 310 ----------------FDAVLKGHIDFESDP-WPLISDSAKDLIRKMLCSQPSERLTAHE 352
F+ + + L + A+DL+ KML S+R++ E
Sbjct: 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 315
Query: 353 VLCHPWI 359
L HP+I
Sbjct: 316 ALQHPYI 322
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 4e-31
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 31/218 (14%)
Query: 102 TLGRKLGQGQFGTTYLCTEIAT--GIEFACKSISKRKL-ISREDVEDVRREIQIMHHLAG 158
TL +G G FG Y A G E A K+ + +E+VR+E ++ L
Sbjct: 10 TLEEIIGIGGFGKVYR----AFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK- 64
Query: 159 HKNIVTIKGA--YEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
H NI+ ++G E +LC +VME GG L + L V +
Sbjct: 65 HPNIIALRGVCLKEPNLC--LVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGM 118
Query: 217 ---HSLG---VMHRDLKPENFLLVNKD------DDFSLKAIDFGLSVFFKPGQIFTDVVG 264
H ++HRDLK N +L+ + + LK DFGL+ + G
Sbjct: 119 NYLHDEAIVPIIHRDLKSSN-ILILQKVENGDLSNKILKITDFGLAREWHRTTK-MSAAG 176
Query: 265 SPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPF 301
+ ++APEV+ + +DVW+ GV+L+ LL+G PF
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 5e-31
Identities = 82/386 (21%), Positives = 142/386 (36%), Gaps = 84/386 (21%)
Query: 55 FSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGT 114
F N KK + +N G D+ + D++ Y + + +G+G FG
Sbjct: 60 FLGLNAKK----RQGMTGGPNN---GGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQ 112
Query: 115 TYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH-----KNIVTIKGA- 168
+ A K + K R+ EI+I+ HL N++ +
Sbjct: 113 VVKAYDHKVHQHVALKMVRNEKRFHRQ----AAEEIRILEHLRKQDKDNTMNVIHMLENF 168
Query: 169 -YEDSLCVHIVMELCAGGELFDRIIQRGHY---SERKAAELTRIIVGVVEACHSLGVMHR 224
+ + +C + EL L++ +I++ + S + I+ ++A H ++H
Sbjct: 169 TFRNHIC--MTFELL-SMNLYE-LIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHC 224
Query: 225 DLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEAD 283
DLKPEN LL + +K IDFG S ++ +++T + S +Y APEV+L YG D
Sbjct: 225 DLKPENILLKQQ-GRSGIKVIDFG-SSCYEHQRVYTYIQ-SRFYRAPEVILGARYGMPID 281
Query: 284 VWTAGVILYILLSGVPPFWAETQQ----------GIFDAVL-------KGHIDFESDPWP 326
+W+ G IL LL+G P E + G+ L K + + P
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRY 341
Query: 327 LISDSAKD--------------------------------------LIRKMLCSQPSERL 348
+ D +++ L P+ R+
Sbjct: 342 CTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM 401
Query: 349 TAHEVLCHPWICENGVAPDRSLDPAV 374
T + L HPW+ P +V
Sbjct: 402 TPGQALRHPWLRRRLPKPPTGEKTSV 427
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 8e-31
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 371 DPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAG 430
+ + L+ A + I+ +S++ + LKE+F+ +D D SG I DELK
Sbjct: 8 PSDIAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEEDELKYF 66
Query: 431 LRRYGS---TLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
L+R+ S L +E + + AAD D G I EF
Sbjct: 67 LQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQE 104
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 4e-30
Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 9/109 (8%)
Query: 435 GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYI 494
L ++I + + +F + + L F+ D D SG+I
Sbjct: 3 TDILSPSDIAAALRDCQAP--DSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFI 58
Query: 495 TVDELQQACAE-----HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
DEL+ +T + + D D DG+I EF M+Q
Sbjct: 59 EEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 1e-30
Identities = 75/311 (24%), Positives = 124/311 (39%), Gaps = 64/311 (20%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR----REIQIMH 154
Y K+GQG FG + TG + A K K++ + E REI+I+
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALREIKILQ 71
Query: 155 HLAGHKNIVTIKG--------AYEDSLCVHIVMELC----AGGELFDRIIQRGHYSERKA 202
L H+N+V + +++V + C AG L ++ + SE K
Sbjct: 72 LLK-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTLSEIKR 128
Query: 203 AELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-----KPGQ 257
+ ++++ + H ++HRD+K N L+ D LK DFGL+ F
Sbjct: 129 --VMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPN 183
Query: 258 IFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQG----IF- 310
+T+ V + +Y PE+LL + YGP D+W AG I+ + + P T+Q I
Sbjct: 184 RYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 243
Query: 311 ------DAVLKGHI---DFESD--------------PWPLISDSAKDLIRKMLCSQPSER 347
V +E + A DLI K+L P++R
Sbjct: 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 303
Query: 348 LTAHEVLCHPW 358
+ + + L H +
Sbjct: 304 IDSDDALNHDF 314
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 2e-30
Identities = 73/332 (21%), Positives = 123/332 (37%), Gaps = 83/332 (25%)
Query: 97 IRDLYT-LGRKLGQGQFGTTY--LCTEIATGIEFACKSISKRKLISREDVED-VRREIQI 152
+ DL+ G K+G+G +G Y + ++A K I + REI +
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG------TGISMSACREIAL 71
Query: 153 MHHLAGHKNIVTIKGAYEDSL--CVHIVMELCAGGELFD--RII--QRGHYSERKAAELT 206
+ L H N+++++ + V ++ + D II R + +K +L
Sbjct: 72 LRELK-HPNVISLQKVFLSHADRKVWLLFDYAE----HDLWHIIKFHRASKANKKPVQLP 126
Query: 207 RIIV---------GVVEACHSLGVMHRDLKPENFLLVNKDDDFS--LKAIDFGLS-VFFK 254
R +V G+ H+ V+HRDLKP N +LV + +K D G + +F
Sbjct: 127 RGMVKSLLYQILDGI-HYLHANWVLHRDLKPAN-ILVMGEGPERGRVKIADMGFARLFNS 184
Query: 255 PGQIFTD---VVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGI 309
P + D VV + +Y APE+LL +HY D+W G I LL+ P F +
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 244
Query: 310 FDAVLKG----HI-------------DFESDPW--------------------------P 326
I D + P
Sbjct: 245 TSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKV 304
Query: 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
A L++K+L P +R+T+ + + P+
Sbjct: 305 KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY 336
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 2e-30
Identities = 79/294 (26%), Positives = 129/294 (43%), Gaps = 45/294 (15%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y +G G +G+ + +G + A K +S R S + RE+ ++ H+ H+
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHMQ-HE 83
Query: 161 NIVTIK------GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
N++ + + + ++VM +L +I+ E+ + +++ G+ +
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPF-MQTDL-QKIMGLKFSEEKIQYLVYQMLKGL-K 140
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL 274
HS GV+HRDLKP N L VN+D + LK +DFGL+ T V + +Y APEV+
Sbjct: 141 YIHSAGVVHRDLKPGN-LAVNEDCE--LKILDFGLARHADAE--MTGYVVTRWYRAPEVI 195
Query: 275 L--KHYGPEADVWTAGVILYILLSGVPPF-------------------WAETQQGIFDAV 313
L HY D+W+ G I+ +L+G F E Q + D
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 255
Query: 314 LKGHID----FESDPW----PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
K +I + P S A DL+ KML +RLTA + L HP+
Sbjct: 256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 3e-30
Identities = 62/267 (23%), Positives = 95/267 (35%), Gaps = 41/267 (15%)
Query: 101 YTLGRKLGQGQFGTTYLCT-EIATGIEFACKSISKRKLISREDVEDV---RREIQIMHHL 156
Y + + G G YL G K L+ D E E Q + +
Sbjct: 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKG-----LVHSGDAEAQAMAMAERQFLAEV 136
Query: 157 AGHKNIVTI-----KGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
H +IV I +IVME G L +A I+
Sbjct: 137 V-HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK--GQKLPVAEAIAYLLEILP 193
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD---VVGSPYY 268
+ HS+G+++ DLKPEN +++ ++ LK ID G + G+P +
Sbjct: 194 ALSYLHSIGLVYNDLKPEN-IMLTEE---QLKLIDLGAV------SRINSFGYLYGTPGF 243
Query: 269 VAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328
APE++ D++T G L L +P G+ E DP
Sbjct: 244 QAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------PEDDPVLKT 293
Query: 329 SDSAKDLIRKMLCSQPSER-LTAHEVL 354
DS L+R+ + P +R TA E+
Sbjct: 294 YDSYGRLLRRAIDPDPRQRFTTAEEMS 320
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-30
Identities = 68/331 (20%), Positives = 125/331 (37%), Gaps = 61/331 (18%)
Query: 78 MRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL 137
M+ + ++ ++ YT+ R + G +G + + GI A K +
Sbjct: 2 MQAKGEAAMRDLIAE-LHAMQSPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVS 59
Query: 138 ISR-----EDVEDVR---REIQIMHHLAGHKNIVTIK--------GAYEDSLCVHIVMEL 181
R D + REI++++H H NI+ ++ A +++V EL
Sbjct: 60 DGRTVNILSDSFLCKRVLREIRLLNHFH-HPNILGLRDIFVHFEEPAMHK---LYLVTEL 115
Query: 182 CAGGELFDRIIQRGHYS---ERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238
+L ++I + + I++G+ H GV+HRDL P N +L+ ++
Sbjct: 116 -MRTDL-AQVIHDQRIVISPQHIQYFMYHILLGL-HVLHEAGVVHRDLHPGN-ILLADNN 171
Query: 239 DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLS 296
D + DF L+ T V +Y APE+++ K + D+W+AG ++ + +
Sbjct: 172 D--ITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
Query: 297 GVPPF-------------------WAETQQGIFDAVLKGHID-----FESDPW----PLI 328
F E + ++ + W P
Sbjct: 230 RKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA 289
Query: 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
A DLI KML P R++ + L HP+
Sbjct: 290 DPVALDLIAKMLEFNPQRRISTEQALRHPYF 320
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 3e-30
Identities = 66/300 (22%), Positives = 113/300 (37%), Gaps = 51/300 (17%)
Query: 99 DLYTLGRKLGQGQFGTTYLCTEI-ATGIEFACKSISKRKLISREDVED------VRREIQ 151
Y ++G+G +G + ++ G A K + R + RE+
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV-------RVQTGEEGMPLSTIREVA 63
Query: 152 IMHHL--AGHKNIVTIK-----GAYEDSLCVHIVMELCAG--GELFDRIIQRGHYSERKA 202
++ HL H N+V + + + +V E D++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETI 122
Query: 203 AELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV 262
++ ++ ++ HS V+HRDLKP+N +LV +K DFGL+ + T V
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQN-ILVTSSGQ--IKLADFGLARIYSFQMALTSV 179
Query: 263 VGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWA--ETQQ--GIF------- 310
V + +Y APEVLL Y D+W+ G I + P F + Q I
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 311 DAVLKGHI---DFESDPW---------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
+ + I + KDL+ K L P++R++A+ L HP+
Sbjct: 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 3e-30
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 469 HLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDG 526
H++ + EE L AF+ FDKD +GYI+ EL+ +TD +E +I+E D D DG
Sbjct: 2 HMDT-DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDG 60
Query: 527 RIDYGEFVAMM---QKGNVGLGRRTMRNSLN 554
+++Y EFV MM + G G G +R +
Sbjct: 61 QVNYEEFVKMMMTVRGGGGGNGWSRLRRKFS 91
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 3e-18
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
+ + LKE FK D D +G I+ EL+ + G L D E+ ++ AD+D G +
Sbjct: 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQV 62
Query: 459 DYGEFIAATVHLNKL---EREEHLVAAF 483
+Y EF+ + + L F
Sbjct: 63 NYEEFVKMMMTVRGGGGGNGWSRLRRKF 90
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 4e-30
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYG 531
E L AF+ FD+DG G+ITVDEL++A A + L+ +IRE D D DGR++Y
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE 62
Query: 532 EFVAMMQK 539
EF M+ +
Sbjct: 63 EFARMLAQ 70
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 3e-18
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTID 459
+ + L+ F+A D D G IT DEL+ + G L E+ ++ ADVD G ++
Sbjct: 1 ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVN 60
Query: 460 YGEFIA 465
Y EF
Sbjct: 61 YEEFAR 66
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 4e-30
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 44/299 (14%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
+ + Y +G G +G+ + TG+ A K +S R S + RE++++ H
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKH 84
Query: 156 LAGHKNIVTIK------GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII 209
+ H+N++ + + E+ V++V L G +L + I++ ++ L I
Sbjct: 85 MK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQFLIYQI 141
Query: 210 VGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV 269
+ ++ HS ++HRDLKP N L VN+D + LK +DFGL+ T V + +Y
Sbjct: 142 LRGLKYIHSADIIHRDLKPSN-LAVNEDCE--LKILDFGLARHTAD--EMTGYVATRWYR 196
Query: 270 APEVLL--KHYGPEADVWTAGVILYILLSGVPPF-------------------WAETQQG 308
APE++L HY D+W+ G I+ LL+G F AE +
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256
Query: 309 IFDAVLKGHID----FESDPW----PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
I + +I + + A DL+ KML +R+TA + L H +
Sbjct: 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 4e-30
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 19/264 (7%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED-VEDVRREIQIMHHLAGH 159
Y + KLG G T YL + I+ A K +E+ ++ RE+ L+ H
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIK-AIFIPPREKEETLKRFEREVHNSSQLS-H 70
Query: 160 KNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL 219
+NIV++ E+ C ++VME G L + I G S A T I+ ++ H +
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD--VVGSPYYVAPE-VLLK 276
++HRD+KP+N L+ D + +LK DFG++ + V+G+ Y +PE +
Sbjct: 131 RIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 277 HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE-----SDPWPLISDS 331
D+++ G++LY +L G PPF ET I +K HI +D I S
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI---AIK-HIQDSVPNVTTDVRKDIPQS 243
Query: 332 AKDLIRKMLCSQPSER-LTAHEVL 354
++I + + R T E+
Sbjct: 244 LSNVILRATEKDKANRYKTIQEMK 267
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 6e-30
Identities = 75/302 (24%), Positives = 130/302 (43%), Gaps = 50/302 (16%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
+R +Y + +G G +G + TG + A K + R S + RE++++ H
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKRAYRELRLLKH 80
Query: 156 LAGHKNIVTIK---------GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELT 206
+ H+N++ + + D ++VM G +L ++++ E + L
Sbjct: 81 MR-HENVIGLLDVFTPDETLDDFTD---FYLVMPF-MGTDL-GKLMKHEKLGEDRIQFLV 134
Query: 207 RIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSP 266
++ + H+ G++HRDLKP N L VN+D + LK +DFGL+ T V +
Sbjct: 135 YQMLKGLRYIHAAGIIHRDLKPGN-LAVNEDCE--LKILDFGLARQADSE--MTGYVVTR 189
Query: 267 YYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPF-------------------WAET 305
+Y APEV+L Y D+W+ G I+ +++G F AE
Sbjct: 190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 249
Query: 306 QQGIFDAVLKGHID----FESDPW----PLISDSAKDLIRKMLCSQPSERLTAHEVLCHP 357
Q + K ++ E + S A +L+ KML +R+TA E L HP
Sbjct: 250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309
Query: 358 WI 359
+
Sbjct: 310 YF 311
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 1e-29
Identities = 78/310 (25%), Positives = 126/310 (40%), Gaps = 54/310 (17%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
++ Y + LG G G + + A K I V+ REI+I+
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ---SVKHALREIKIIRR 64
Query: 156 LAGHKNIVTIK--------------GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERK 201
L H NIV + G+ + V+IV E +L ++++G E
Sbjct: 65 L-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY-METDL-ANVLEQGPLLEEH 121
Query: 202 AAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP----GQ 257
A ++ ++ HS V+HRDLKP N L +N +D LK DFGL+ P
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPAN-LFINT-EDLVLKIGDFGLARIMDPHYSHKG 179
Query: 258 IFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPF-------------- 301
++ + + +Y +P +LL +Y D+W AG I +L+G F
Sbjct: 180 HLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE 239
Query: 302 -----WAETQQGIFDAV---LKGHIDFESDPW----PLISDSAKDLIRKMLCSQPSERLT 349
E +Q + + ++ + P P IS A D + ++L P +RLT
Sbjct: 240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT 299
Query: 350 AHEVLCHPWI 359
A E L HP++
Sbjct: 300 AEEALSHPYM 309
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224 | Back alignment and structure |
|---|
Score = 115 bits (288), Expect = 2e-29
Identities = 30/182 (16%), Positives = 68/182 (37%), Gaps = 17/182 (9%)
Query: 373 AVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLR 432
+ L+ ++ + + + ++ E+ L FK SG + + K
Sbjct: 22 KIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNEC--PSGVVNEETFKQIYA 79
Query: 433 RYGSTLKDTEIRD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGS 491
++ + L +A D +G++ + +F+ A L + E L F +D +
Sbjct: 80 QFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKD 139
Query: 492 GYITVDELQQ---ACAEHNMTDV-----------LLEDIIREVDQDNDGRIDYGEFVAMM 537
GYI +E+ A + ++ +++D++ DG + EF+
Sbjct: 140 GYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 199
Query: 538 QK 539
Q+
Sbjct: 200 QE 201
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 2e-29
Identities = 70/304 (23%), Positives = 121/304 (39%), Gaps = 42/304 (13%)
Query: 60 PKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCT 119
+ + + M +++ G Y L R +G+G G Y
Sbjct: 3 SSHHHHHHSSGLVPRGSHMDGTAESREGTQFGP--------YRLRRLVGRGGMGDVYEAE 54
Query: 120 EIATGIEFACKSISKRKLISREDVEDV------RREIQIMHHLAGHKNIVTI--KGAYED 171
+ A K L+S D +RE + L ++V I G +
Sbjct: 55 DTVRERIVALK------LMSETLSSDPVFRTRMQREARTAGRLQ-EPHVVPIHDFGEIDG 107
Query: 172 SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENF 231
L ++ M L G +L + ++G + +A + R I ++A H+ G HRD+KPEN
Sbjct: 108 QL--YVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENI 165
Query: 232 LLVNKDDDFSLKAIDFGLSVFFKPGQIFT---DVVGSPYYVAPEVLL-KHYGPEADVWTA 287
L+ D +DFG++ ++ T + VG+ YY+APE H AD++
Sbjct: 166 LV---SADDFAYLVDFGIASATTDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYAL 221
Query: 288 GVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE----SDPWPLISDSAKDLIRKMLCSQ 343
+LY L+G PP+ + +V+ HI+ S P I + +I + +
Sbjct: 222 TCVLYECLTGSPPYQGDQL-----SVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKN 276
Query: 344 PSER 347
P +R
Sbjct: 277 PEDR 280
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 2e-29
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 371 DPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAG 430
+ + L++ + + LS+ + +K++F+ +D D SG + DELK
Sbjct: 8 AEDIAAALQECQDPDTFEPQKF-FQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYF 66
Query: 431 LRRYGS---TLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
L+++ S L ++E + LMDAAD D G I EF
Sbjct: 67 LQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQE 104
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-28
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 9/109 (8%)
Query: 435 GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYI 494
L +I + T + +F L+K+ + + F++ D D SGY+
Sbjct: 3 TDILSAEDIAAALQECQDP--DTFEPQKFFQT-SGLSKMSASQ-VKDIFRFIDNDQSGYL 58
Query: 495 TVDELQQACAE-----HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
DEL+ + +T+ + ++ D D DG+I EF M+
Sbjct: 59 DGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 8e-29
Identities = 86/333 (25%), Positives = 130/333 (39%), Gaps = 63/333 (18%)
Query: 73 KKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSI 132
+ M V G ++ YT +G+G +G + + A K I
Sbjct: 2 HHHHHMAAAAAAGPEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI 60
Query: 133 S--------KRKLISREDVEDVRREIQIMHHLAGHKNIVTIK-----GAYEDSLCVHIVM 179
S +R L REI+I+ H+NI+ I E V+IV
Sbjct: 61 SPFEHQTYCQRTL----------REIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQ 109
Query: 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD 239
+L +L ++++ H S I+ ++ HS V+HRDLKP N LL+N D
Sbjct: 110 DL-METDL-YKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD 166
Query: 240 FSLKAIDFGLSVFFKP----GQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYI 293
LK DFGL+ P T+ V + +Y APE++L K Y D+W+ G IL
Sbjct: 167 --LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 294 LLSGVPPF-------------------WAETQQGIFDAVLKGHID----FESDPW----P 326
+LS P F E I + + ++ PW P
Sbjct: 225 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFP 284
Query: 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
A DL+ KML P +R+ + L HP++
Sbjct: 285 NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 9e-28
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 16/138 (11%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE-----IRDLMDAADVDNSGTIDYG 461
+ F A+ G + +EL+ L + G + R ++ D D++G + +
Sbjct: 2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 462 EFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIRE 519
F LN + F D+DGSG + EL+QA + ++ L I++
Sbjct: 61 AFKELWAALNAWK------ENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114
Query: 520 VDQDNDGRIDYGEFVAMM 537
+GRI + ++VA
Sbjct: 115 Y--SKNGRIFFDDYVACC 130
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 3e-17
Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 8/97 (8%)
Query: 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEF 463
+ KE F +D D SG + EL+ + G L + ++ + G I + ++
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKN--GRIFFDDY 126
Query: 464 IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
+A V L L F+ D G
Sbjct: 127 VACCVKL------RALTDFFRKRDHLQQGSANFIYDD 157
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 8e-09
Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 9/66 (13%)
Query: 483 FQYFDK--DGSGYITVDELQQA-------CAEHNMTDVLLEDIIREVDQDNDGRIDYGEF 533
+ YF G + +ELQ+ + +I +D+D+ G++ + F
Sbjct: 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF 62
Query: 534 VAMMQK 539
+
Sbjct: 63 KELWAA 68
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 1e-27
Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 16/149 (10%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLK-----DTEIRDLMDAA 450
+ + L F A G I DEL+ L + G R ++
Sbjct: 24 GPAFPGQTQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSML 82
Query: 451 DVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNM 508
D D SGT+ + EF LN F FD D SG + ELQ+A +
Sbjct: 83 DRDMSGTMGFNEFKELWAVLNGWR------QHFISFDTDRSGTVDPQELQKALTTMGFRL 136
Query: 509 TDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
+ + I + +G+I + +++A
Sbjct: 137 SPQAVNSIAKRY--STNGKITFDDYIACC 163
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 2e-16
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 8/97 (8%)
Query: 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEF 463
+ G ++ F + DTD SG + EL+ L G L + + + G I + ++
Sbjct: 102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTN--GKITFDDY 159
Query: 464 IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
IA V L L +F+ D G +
Sbjct: 160 IACCVKLRALTD------SFRRRDTAQQGVVNFPYDD 190
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 4e-09
Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQA-------CAEHNMTDVLLEDIIREVDQDNDG 526
+ ++ L F G I DELQ+ ++ +D+D G
Sbjct: 30 QTQDPLYGYFA-AVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 88
Query: 527 RIDYGEFVAMMQK 539
+ + EF +
Sbjct: 89 TMGFNEFKELWAV 101
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 2e-27
Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 24/269 (8%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED-VEDVRREIQIMHHLAGH 159
Y LG LG G +L ++ + A K + + L RRE Q L H
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRREAQNAAALN-H 71
Query: 160 KNIVTI--KGAYEDSLCVH--IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEA 215
IV + G E IVME G L D + G + ++A E+ +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTD---VVGSPYYVAP 271
H G++HRD+KP N ++ ++K +DFG++ G T V+G+ Y++P
Sbjct: 132 SHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 272 E-VLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE----SDPWP 326
E +DV++ G +LY +L+G PPF ++ + + H+ + S
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV---AYQ-HVREDPIPPSARHE 244
Query: 327 LISDSAKDLIRKMLCSQPSER-LTAHEVL 354
+S ++ K L P R TA E+
Sbjct: 245 GLSADLDAVVLKALAKNPENRYQTAAEMR 273
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-27
Identities = 89/323 (27%), Positives = 127/323 (39%), Gaps = 80/323 (24%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSIS--------KRKLISREDVEDVR 147
NI + L LG+G +G T TG A K I R L
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL---------- 57
Query: 148 REIQIMHHLAGHKNIVTIK--------GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSE 199
REI+I+ H H+NI+TI + + V+I+ EL +L R+I S+
Sbjct: 58 REIKILKHFK-HENIITIFNIQRPDSFENFNE---VYIIQEL-MQTDL-HRVISTQMLSD 111
Query: 200 RKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS--------- 250
+ V+ H V+HRDLKP N LL+N + D LK DFGL+
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSN-LLINSNCD--LKVCDFGLARIIDESAAD 168
Query: 251 --VFFKPGQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAET- 305
+ V + +Y APEV+L Y DVW+ G IL L P F
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
Query: 306 --Q-QGIFDAVLKGHIDFESDPWPLISDSAK--------------------------DLI 336
Q IF + G ++D + S A+ DL+
Sbjct: 229 RHQLLLIFGII--GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLL 286
Query: 337 RKMLCSQPSERLTAHEVLCHPWI 359
++ML P++R+TA E L HP++
Sbjct: 287 QRMLVFDPAKRITAKEALEHPYL 309
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 3e-27
Identities = 33/251 (13%), Positives = 67/251 (26%), Gaps = 36/251 (14%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y L G + + A + A + + ++ + +++ + +
Sbjct: 33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKP 91
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
+ + +V E GG L + S A + + +A H G
Sbjct: 92 GVARVLDVVHTRAGGLVVAEWIRGGSLQEVA--DTSPSPVGAIRAMQSLAAAADAAHRAG 149
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGP 280
V P + V+ D G + V+ P + P
Sbjct: 150 VALSIDHPSR-VRVSID------------------GDV---VLAYPATMPDA------NP 181
Query: 281 EADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE----SDPWPLISDSAKDLI 336
+ D+ G LY LL P + + + +D I +
Sbjct: 182 QDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER-DTAGQPIEPADIDRDIPFQISAVA 240
Query: 337 RKMLCSQPSER 347
+ + R
Sbjct: 241 ARSVQGDGGIR 251
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 6e-27
Identities = 68/364 (18%), Positives = 117/364 (32%), Gaps = 84/364 (23%)
Query: 70 SPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFAC 129
S + D++ + K + + + + RK+G G FG LC I +A
Sbjct: 6 HHSSGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAV 65
Query: 130 KSI-SKRKLISREDVEDVRREIQIMHHLAGH----KNIVTIKGA--YEDSLCVHIVMELC 182
K + + +K + E I+ + NIV G Y D +C ++ E
Sbjct: 66 KVVRNIKKY-----TRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC--LIFEPL 118
Query: 183 AGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD--- 237
G L++ I + + + I+ + + + H DLKPEN LL +
Sbjct: 119 -GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK 177
Query: 238 -------------------DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH- 277
+K IDFG + F ++ + Y APEV+L
Sbjct: 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF--KSDYHGSIINTRQYRAPEVILNLG 235
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQ----------GIFDAVL-------KGHIDF 320
+ +D+W+ G +L L +G F + G
Sbjct: 236 WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYV 295
Query: 321 ESDPWPL------------------------ISDSA-KDLIRKMLCSQPSERLTAHEVLC 355
D L I D + +L P+ R + E+L
Sbjct: 296 NKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK 355
Query: 356 HPWI 359
H ++
Sbjct: 356 HKFL 359
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 8e-27
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 458 IDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLED 515
GE + + + EE + AF+ DKDG+GYI+ EL+ +TD +++
Sbjct: 10 GSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 69
Query: 516 IIREVDQDNDGRIDYGEFVAMM 537
+IRE D D DG+++Y EFV MM
Sbjct: 70 MIREADIDGDGQVNYEEFVQMM 91
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 1e-16
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA 449
++ ++ SEEE ++E F+ D D +G I+ EL+ + G L D E+ +++
Sbjct: 17 YFQSLMKDTDSEEE---IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 73
Query: 450 ADVDNSGTIDYGEFIA 465
AD+D G ++Y EF+
Sbjct: 74 ADIDGDGQVNYEEFVQ 89
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-26
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
LSEE+ +KE F DT+ +G+I + ELK +R G +K EI +LM+ D + +G I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 459 DYGEFIAATVHLNKLEREE 477
+ +F+ + K++ +
Sbjct: 61 GFDDFL--DIMTEKIKNRD 77
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 3e-18
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYG 531
E+++ + AF FD + +G I EL+ A ++ + +++ E D++ +G I +
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Query: 532 EFVAMMQK 539
+F+ +M +
Sbjct: 64 DFLDIMTE 71
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 2e-26
Identities = 84/354 (23%), Positives = 131/354 (37%), Gaps = 117/354 (33%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSIS---------KRKLISREDVEDV 146
++ Y L +KLG+G +G + + TG A K I +R
Sbjct: 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF--------- 56
Query: 147 RREIQIMHHLAGHKNIVTIK-----GAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERK 201
REI I+ L+GH+NIV + D V++V + +L +I +
Sbjct: 57 -REIMILTELSGHENIVNLLNVLRADNDRD---VYLVFDY-METDL-HAVI--------R 102
Query: 202 AAELTR---------IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS-- 250
A L +I + + HS G++HRD+KP N +L+N + +K DFGLS
Sbjct: 103 ANILEPVHKQYVVYQLIKVI-KYLHSGGLLHRDMKPSN-ILLNAECH--VKVADFGLSRS 158
Query: 251 --------------------VFFKPGQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAG 288
F I TD V + +Y APE+LL Y D+W+ G
Sbjct: 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLG 218
Query: 289 VILYILLSGVPPF------------------------------------------WAETQ 306
IL +L G P F Q
Sbjct: 219 CILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQ 278
Query: 307 QGIFDAVLKGHIDFES-DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
D K +P ++ A DL+ K+L P++R++A++ L HP++
Sbjct: 279 SNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFV 332
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 3e-26
Identities = 29/156 (18%), Positives = 61/156 (39%), Gaps = 17/156 (10%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRD-LMDAADVDNSGT 457
++ E+ L FK + SG + + K ++ + L +A D +G+
Sbjct: 15 FTKRELQVLYRGFK--NEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 72
Query: 458 IDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQ---ACAEHNMTDV--- 511
+ + +F+ A L + E L F +D + GYI +E+ A +
Sbjct: 73 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV 132
Query: 512 --------LLEDIIREVDQDNDGRIDYGEFVAMMQK 539
++ +++D++ DG + EF+ Q+
Sbjct: 133 LKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQE 168
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 5e-09
Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 12/109 (11%)
Query: 410 MFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469
+F A DT +G++ F++ L ++R + D++ G I+ E +
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120
Query: 470 LNKLER------------EEHLVAAFQYFDKDGSGYITVDELQQACAEH 506
+ + +H+ FQ DK+ G +T+DE ++ E
Sbjct: 121 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQED 169
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 6e-26
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Query: 381 FSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKD 440
+ + L EE+A L+ +F A D + SG + +E +A ++
Sbjct: 3 HHHHHSSGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRP 60
Query: 441 TEIRDLMDAADVDNSGTIDYGEFIA 465
+ + D D G I + EF
Sbjct: 61 ADAEAVFQRLDADRDGAITFQEFAR 85
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 3e-25
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEF 533
E L + F D + SG + +E + C E + E + + +D D DG I + EF
Sbjct: 24 EELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEF 83
Query: 534 VAMMQK 539
Sbjct: 84 ARGFLG 89
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 6e-26
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 19/171 (11%)
Query: 386 KLKKMALRVIAES--LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEI 443
KL K L + +S EI + F SG + ++ +++ +
Sbjct: 7 KLSKDDLTCLKQSTYFDRREIQQWHKGFL--RDCPSGQLAREDFVKIYKQFFPFGSPEDF 64
Query: 444 RD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQ- 501
+ L D DN+G I + EFI ++ EE L AF+ +D + GYIT DE+
Sbjct: 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124
Query: 502 -------------ACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ ++ ++ I + +D++ DG I EF +
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 7e-08
Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 14/130 (10%)
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD 448
+ S E+ A +F D DN+G I F+E L + ++ +
Sbjct: 49 VKIYKQFFPFGSPEDFA--NHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFE 106
Query: 449 AADVDNSGTIDYGEFI------------AATVHLNKLEREEHLVAAFQYFDKDGSGYITV 496
D+++ G I + E + T++ ++ E + F+ DK+ GYIT+
Sbjct: 107 LYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITL 166
Query: 497 DELQQACAEH 506
DE ++
Sbjct: 167 DEFREGSKVD 176
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 8e-26
Identities = 33/177 (18%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 382 SAMNKLKKMALRVIAES--LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLK 439
S L K L + + SEEE+ + F +G IT + ++ ++
Sbjct: 11 SKSGALSKEILEELQLNTKFSEEELCSWYQSFL--KDCPTGRITQQQFQSIYAKFFPDTD 68
Query: 440 DTEIRD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDE 498
+ + D + GT+D+ E++ A + + L AF +D DG+G I+ +E
Sbjct: 69 PKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNE 128
Query: 499 LQQAC----------------AEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ + + N + E I + +++D ++ EF+
Sbjct: 129 VLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA 185
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 55.0 bits (132), Expect = 8e-09
Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 14/111 (12%)
Query: 410 MFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469
+F++ D++ G + F E L + + ++ DVD +GTI E + +
Sbjct: 76 VFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA 135
Query: 470 LNKLER--------------EEHLVAAFQYFDKDGSGYITVDELQQACAEH 506
+ K+ E+ ++YF K+ +T E + +
Sbjct: 136 IFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLAN 186
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 9e-26
Identities = 72/343 (20%), Positives = 118/343 (34%), Gaps = 75/343 (21%)
Query: 83 DNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED 142
D + + V D +++ Y + LG+G FG C + A G I + RE
Sbjct: 4 DKEGHLVC-RIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62
Query: 143 VEDVRREIQIMHHLA-----GHKNIVTIKGA--YEDSLCVHIVMELCAGGELFDRIIQRG 195
R EI ++ + V + + +C I EL G F+ + +
Sbjct: 63 A---RLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC--IAFELL-GKNTFEFLKENN 116
Query: 196 H--YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD---------------- 237
Y + + + H + H DLKPEN L VN +
Sbjct: 117 FQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176
Query: 238 DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLS 296
+ S++ DFG + F + T +V + +Y PEV+L+ + DVW+ G IL+
Sbjct: 177 KNTSIRVADFGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234
Query: 297 GVPPFWAETQQ----------GIFD------AVLKGHIDFESDPWPLISDSAK------- 333
G F + G + + W S +
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK 294
Query: 334 -----------------DLIRKMLCSQPSERLTAHEVLCHPWI 359
DL+R+ML P++R+T E L HP+
Sbjct: 295 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 108 bits (270), Expect = 1e-25
Identities = 69/373 (18%), Positives = 118/373 (31%), Gaps = 118/373 (31%)
Query: 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
D Y + RKLG G F T +L +I A K + K + E EI+++
Sbjct: 33 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMK-VVKS---AEHYTETALDEIRLLK 88
Query: 155 HLA-------GHKNIV------TIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHY---S 198
+ + +V I G +C +V E+ G L I + +Y
Sbjct: 89 SVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC--MVFEV-LGHHLLK-WIIKSNYQGLP 144
Query: 199 ERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKD-------------------- 237
++ + ++ ++ H+ ++H D+KPEN LL +
Sbjct: 145 LPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPP 204
Query: 238 --------------------------DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAP 271
+ +K D G + + + FT+ + + Y +
Sbjct: 205 PSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACW--VHKHFTEDIQTRQYRSL 262
Query: 272 EVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFD---------AVL------- 314
EVL+ Y AD+W+ + + L +G F + + +L
Sbjct: 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKL 322
Query: 315 -----KGHIDFESD----------PWPLIS-------------DSAKDLIRKMLCSQPSE 346
F PW L D + ML P +
Sbjct: 323 IVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEK 382
Query: 347 RLTAHEVLCHPWI 359
R TA E L HPW+
Sbjct: 383 RATAAECLRHPWL 395
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 77/341 (22%), Positives = 122/341 (35%), Gaps = 79/341 (23%)
Query: 87 YYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEF-ACKSI-SKRKLISREDVE 144
+ + D + Y + LG+G FG C + G A K + + + E
Sbjct: 3 HLIC-QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY-----CE 56
Query: 145 DVRREIQIMHHLA-----GHKNIVTIKGA--YEDSLCVHIVMELCAGGELFDRIIQRGH- 196
R EIQ++ HL V + + +C IV EL G +D I + G
Sbjct: 57 AARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC--IVFELL-GLSTYDFIKENGFL 113
Query: 197 -YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD----------------DD 239
+ ++ I V HS + H DLKPEN L V D +
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN 173
Query: 240 FSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGV 298
+K +DFG + + + + +V + +Y APEV+L + DVW+ G IL G
Sbjct: 174 PDIKVVDFGSATY--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF 231
Query: 299 PPFWAETQQ----------GIFDAVL------KGHIDFESDPWPLISDSAK--------- 333
F + G + + + + W S + +
Sbjct: 232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPL 291
Query: 334 ---------------DLIRKMLCSQPSERLTAHEVLCHPWI 359
DLI+KML P++R+T E L HP+
Sbjct: 292 KEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 2e-25
Identities = 35/175 (20%), Positives = 68/175 (38%), Gaps = 19/175 (10%)
Query: 382 SAMNKLKKMALRVIAES--LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLK 439
+ +KLK + + +E+E+ + F SG + + +++
Sbjct: 3 KSNSKLKPEVVEELTRKTYFTEKEVQQWYKGFI--KDCPSGQLDAAGFQKIYKQFFPFGD 60
Query: 440 DTEIRD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDE 498
T+ + + D + G I++ EFI A ++ +E L AF+ +D D GYIT +E
Sbjct: 61 PTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE 120
Query: 499 LQQ----------ACAEHNMTDVLLED----IIREVDQDNDGRIDYGEFVAMMQK 539
+ E + E I +D++ DG++ EF +
Sbjct: 121 MLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 175
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 1e-08
Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 12/109 (11%)
Query: 410 MFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFI----- 464
+F D + G I F E L D ++R D+DN G I E +
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
Query: 465 -------AATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH 506
+ + E+ + F DK+ G +T+ E Q+
Sbjct: 128 IYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD 176
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 99.5 bits (248), Expect = 2e-25
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 464 IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVD 521
I A +H + F+ FD + I+ +E + C +TD + + E+
Sbjct: 11 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 70
Query: 522 QDNDGRIDYGEFVAMMQK 539
+ GR+ Y +F++
Sbjct: 71 VNAKGRLKYPDFLSRFSS 88
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 89.1 bits (221), Expect = 1e-21
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 388 KKMALRVIAESLSE---EEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIR 444
A R I L + + + F+ DT + I+ +E +A R L D +
Sbjct: 4 MATADRDILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFD 63
Query: 445 DLMDAADVDNSGTIDYGEFIAA 466
L + V+ G + Y +F++
Sbjct: 64 RLWNEMPVNAKGRLKYPDFLSR 85
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 5e-25
Identities = 63/300 (21%), Positives = 102/300 (34%), Gaps = 56/300 (18%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR-REIQIMHHL 156
RD+ TL +G+G++G + + G A K SR++ R E+ L
Sbjct: 8 RDI-TLLECVGKGRYGEVWRGS--WQGENVAVK-----IFSSRDEKSWFRETELYNTVML 59
Query: 157 AGHKNIVTIKGAYEDSLCVH----IVMELCAGGELFDRIIQRGHYSERKAAELTRIIV-- 210
H+NI+ + S ++ G L+D +Q + I
Sbjct: 60 R-HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYD-YLQLTTLDTVSCLRIVLSIASG 117
Query: 211 ------GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-- 262
+ + HRDLK +N L+ + D GL+V DV
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADLGLAVMHSQSTNQLDVGN 174
Query: 263 ---VGSPYYVAPEVL-------LKHYGPEADVWTAGVILYILLSGVPPFW-AETQQGIFD 311
VG+ Y+APEVL D+W G++L+ + + E + F
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234
Query: 312 AVLKGHIDFESDPW--------PLISDSA---------KDLIRKMLCSQPSERLTAHEVL 354
V+ FE P I + L+++ PS RLTA +
Sbjct: 235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK 294
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-25
Identities = 78/381 (20%), Positives = 133/381 (34%), Gaps = 133/381 (34%)
Query: 85 QTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSIS---------KR 135
+ Y G K ++ D Y + +G+G +G YL + T A K ++ KR
Sbjct: 12 ENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKR 71
Query: 136 KLISREDVEDVRREIQIMHHLAGHKNIVTIK--------GAYEDSLCVHIVMELCAGGEL 187
L REI I++ L I+ + +++ ++IV+E+ A +L
Sbjct: 72 IL----------REITILNRL-KSDYIIRLYDLIIPDDLLKFDE---LYIVLEI-ADSDL 116
Query: 188 FDRIIQRGHYSERKAAELTR---------IIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238
++ + LT +++G H G++HRDLKP N L+N+D
Sbjct: 117 -KKLF-------KTPIFLTEEHIKTILYNLLLGE-NFIHESGIIHRDLKPAN-CLLNQDC 166
Query: 239 DFSLKAIDFGLS-----------------------VFFKPGQIFTDVVGSPYYVAPEVLL 275
+K DFGL+ + T V + +Y APE++L
Sbjct: 167 S--VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL 224
Query: 276 --KHYGPEADVWTAGVILYILLS-----------------GVPPFWAETQQGIFDAVLKG 316
++Y D+W+ G I LL+ G F + K
Sbjct: 225 LQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKS 284
Query: 317 HID----------------------------------FESDPW----PLISDSAKDLIRK 338
+ D + P ISD +L+
Sbjct: 285 NRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLES 344
Query: 339 MLCSQPSERLTAHEVLCHPWI 359
ML P++R+T + L HP++
Sbjct: 345 MLKFNPNKRITIDQALDHPYL 365
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 3e-24
Identities = 62/300 (20%), Positives = 101/300 (33%), Gaps = 56/300 (18%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR-REIQIMHHL 156
R + L +G+G+FG + G E A K SRE+ R EI L
Sbjct: 42 RTI-VLQESIGKGRFGEVWRGK--WRGEEVAVK-----IFSSREERSWFREAEIYQTVML 93
Query: 157 AGHKNIVTIKGAYEDSLCVH----IVMELCAGGELFDRIIQRGHYSERKAAELTRIIV-- 210
H+NI+ A +V + G LFD + R + +L
Sbjct: 94 R-HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMIKLALSTASG 151
Query: 211 ------GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV-- 262
+V + HRDLK +N L+ + + D GL+V D+
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAP 208
Query: 263 ---VGSPYYVAPEVLL-------KHYGPEADVWTAGVILYILLSGVPPFW-AETQQGIFD 311
VG+ Y+APEVL AD++ G++ + + E Q +
Sbjct: 209 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 268
Query: 312 AVLKGHIDFESDPW--------PLISDSA---------KDLIRKMLCSQPSERLTAHEVL 354
++ E P I + ++R+ + + RLTA +
Sbjct: 269 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 328
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 7e-24
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDN 454
+A + ++IA + +FK DT+ G I+ EL L+ GS + E+R +M D D
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDG 59
Query: 455 SGTIDYGEFIAATVHLNKLEREEHLVAAF 483
G I + EF + + F
Sbjct: 60 DGFISFDEFT--DFARANRGLVKDVSKIF 86
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 7e-22
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEH-NMTDVLLEDIIREVDQDNDGRIDYGE 532
+ F+ FD +G G I+ EL A ++T + ++ E+D D DG I + E
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDE 67
Query: 533 FVAMMQKGN 541
F +
Sbjct: 68 FTDFARANR 76
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 9e-24
Identities = 15/60 (25%), Positives = 33/60 (55%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 466
+ +FK +D + GA++++E+KA + + + + ++ + + D D +G ID EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 4e-15
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 479 LVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAM 536
A F+ D +G G ++ +E++ ++ + LL+ I + +D D +G ID EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 537 M 537
Sbjct: 62 Y 62
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 7e-15
Identities = 16/62 (25%), Positives = 25/62 (40%)
Query: 443 IRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQA 502
L DV+ G + Y E A ++ E+ L F+ D DG+G I +E +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 503 CA 504
Sbjct: 62 YG 63
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 2e-06
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLR 432
K + +E+ + + +FK++D D +G I +E
Sbjct: 23 KAFVSKKRAIKNEQLL---QLIFKSIDADGNGEIDQNEFAKFYG 63
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 4e-06
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 512 LLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDA 560
+ E + +E+D + DG + Y E A + K L + +
Sbjct: 1 MAEALFKEIDVNGDGAVSYEEVKAFVSK----KRAIKNEQLLQLIFKSI 45
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 1e-23
Identities = 59/300 (19%), Positives = 102/300 (34%), Gaps = 63/300 (21%)
Query: 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN 161
L +G+FG + A K + + E+ + + H+N
Sbjct: 27 QLLEVKARGRFGCVWKAQ--LLNEYVAVKIFPIQD----KQSWQNEYEVYSLPGMK-HEN 79
Query: 162 IVTIKGA------YEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGV--- 212
I+ GA + L ++ G L D ++ S EL I +
Sbjct: 80 ILQFIGAEKRGTSVDVDLW--LITAFHEKGSLSD-FLKANVVSWN---ELCHIAETMARG 133
Query: 213 ----------VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD- 261
++ H + HRD+K +N LL ++ + DFGL++ F+ G+ D
Sbjct: 134 LAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTACIADFGLALKFEAGKSAGDT 190
Query: 262 --VVGSPYYVAPEVLLKHYGPE------ADVWTAGVILYILLSGVPPFW--AETQQGIFD 311
VG+ Y+APEVL + D++ G++L+ L S + F+
Sbjct: 191 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250
Query: 312 AVLKGHIDFES---------------DPWPLISDSAK--DLIRKMLCSQPSERLTAHEVL 354
+ H E D W + A + I + RL+A V
Sbjct: 251 EEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 1e-23
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 22/251 (8%)
Query: 67 PRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIE 126
S K+ + G D+ Y + + D Y + +G+G FG +
Sbjct: 22 SMSSHKKERKVYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEW 81
Query: 127 FACKSISKRKLISREDVEDVRREIQIMHHLAGH-----KNIVTIKGA--YEDSLCVHIVM 179
A K I +K + + E++++ + H IV +K + + LC +V
Sbjct: 82 VAIKIIKNKKAFLNQ----AQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC--LVF 135
Query: 180 ELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHS--LGVMHRDLKPENFLLVN 235
E+ L+D + S + + + + + L ++H DLKPEN LL N
Sbjct: 136 EML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN 194
Query: 236 KDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYIL 294
++K +DFG S GQ + S +Y +PEVLL Y D+W+ G IL +
Sbjct: 195 -PKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 251
Query: 295 LSGVPPFWAET 305
+G P F
Sbjct: 252 HTGEPLFSGAN 262
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 333 KDLIRKMLCSQPSERLTAHEVLCHPWICE 361
KDLI +ML P R+ + L H + +
Sbjct: 350 KDLILRMLDYDPKTRIQPYYALQHSFFKK 378
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 1e-23
Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 377 RLKQFSAMNKLKKMAL---RVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR 433
+ +Q ++++ K L + ++ ++ G KE + D + +G I LK L +
Sbjct: 1 KAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK 60
Query: 434 YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
G E++ L+ + T Y +F+
Sbjct: 61 LGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 3e-21
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYG 531
+ E + FD +G+G I + L++ + T + L+ +I EV + Y
Sbjct: 29 SKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYP 88
Query: 532 EFVAMMQKGNVGLGRRTM 549
+F+ MM + + +
Sbjct: 89 DFLRMMLGKRSAILKMIL 106
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-23
Identities = 55/302 (18%), Positives = 104/302 (34%), Gaps = 60/302 (19%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIAT--GIEFACKSISKRKLISREDVEDVR-REIQIMH 154
+ + + +++G+G++G ++ G + A K + E+ R EI
Sbjct: 37 KQI-QMVKQIGKGRYGEVWM----GKWRGEKVAVK-----VFFTTEEASWFRETEIYQTV 86
Query: 155 HLAGHKNIVTIKGAYEDSLCVH----IVMELCAGGELFDRIIQRGHYSERKAAELTRIIV 210
+ H+NI+ A ++ + G L+D ++ + +L V
Sbjct: 87 LMR-HENILGFIAADIKGTGSWTQLYLITDYHENGSLYD-YLKSTTLDAKSMLKLAYSSV 144
Query: 211 --------GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV 262
+ + HRDLK +N L+ + + D GL+V F D+
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVKFISDTNEVDI 201
Query: 263 -----VGSPYYVAPEVLL-------KHYGPEADVWTAGVILYILLSGV----------PP 300
VG+ Y+ PEVL AD+++ G+IL+ + P
Sbjct: 202 PPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261
Query: 301 FWAETQQGIFDAVLKGHIDFESD----PWPLISDSA----KDLIRKMLCSQPSERLTAHE 352
+ ++ + + P SD L+ + P+ RLTA
Sbjct: 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALR 321
Query: 353 VL 354
V
Sbjct: 322 VK 323
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 2e-23
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQA--------CAEHNMTDVLLEDIIREVDQDND 525
+ + L AAF+ D +G GY+T ELQ + +I+ D+++D
Sbjct: 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSD 63
Query: 526 GRIDYGEFVAMMQK 539
G+I EF+ +
Sbjct: 64 GKISKEEFLNANAE 77
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 2e-14
Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLK------DTEIRDLMDAADV 452
++ + A L+ FK +D + G +T EL+ + + L+ AD
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60
Query: 453 DNSGTIDYGEFIA 465
++ G I EF+
Sbjct: 61 NSDGKISKEEFLN 73
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 2e-23
Identities = 82/417 (19%), Positives = 144/417 (34%), Gaps = 124/417 (29%)
Query: 46 NSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGR 105
+ + +Q+ + + + + +K + + H I D Y +
Sbjct: 3 SHEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKP---TASMPRPHSDWQIPDRYEIRH 59
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVR--REIQIMHHLAGHKNIV 163
+G G +G + A K I + + + ++ R REI I++ L H ++V
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILR---VFEDLIDCKRILREIAILNRL-NHDHVV 115
Query: 164 TIK-----GAYEDSLCVHIVMELC---------AGGELFDRIIQRGHYSERKAAELTRII 209
+ E +++V+E+ L + I+ Y ++
Sbjct: 116 KVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLY---------NLL 166
Query: 210 VGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS------------------- 250
VGV + HS G++HRDLKP N LVN+D +K DFGL+
Sbjct: 167 VGV-KYVHSAGILHRDLKPAN-CLVNQDCS--VKVCDFGLARTVDYPENGNSQLPISPRE 222
Query: 251 ---------VFFKPGQIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVP 299
+ T V + +Y APE++L ++Y DVW+ G I LL+ +
Sbjct: 223 DDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282
Query: 300 PFWAETQQG--IF------------------DAVLKGHID------------FESDPWPL 327
A +F +G+ D E D L
Sbjct: 283 ENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEAL 342
Query: 328 ISDSAKD--------------------------LIRKMLCSQPSERLTAHEVLCHPW 358
+ AK L+++ML P++R+T +E L HP+
Sbjct: 343 EKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPF 399
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 3e-23
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEH-NMTDVLLEDIIREVDQDNDGRIDYGEFV 534
+ + F+ FD +G G I++ EL A + + ++ ++ E+D D DG ID+ EF+
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFI 61
Query: 535 AMMQKG 540
+
Sbjct: 62 SFCNAN 67
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 2e-17
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 401 EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDY 460
++ ++ +FK DT+ G I+ EL LR GST D E++ +M D D G ID+
Sbjct: 2 ADD---MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDF 57
Query: 461 GEFIAATVHLNKLEREEHLVAAF 483
EFI+ + + F
Sbjct: 58 NEFIS--FCNANPGLMKDVAKVF 78
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 7e-23
Identities = 58/237 (24%), Positives = 92/237 (38%), Gaps = 34/237 (14%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
+ LG ++G+G FG + A A KS R+ + + +E +I+
Sbjct: 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQY- 169
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC- 216
H NIV + G ++IVMEL GG+ + R + + L +++
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGME 227
Query: 217 --HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV----- 269
S +HRDL N L+ + LK DFG+S + Y
Sbjct: 228 YLESKCCIHRDLAARNCLV---TEKNVLKISDFGMS---------REEADGVYAASGGLR 275
Query: 270 -------APEVLL-KHYGPEADVWTAGVILY-ILLSGVPPFWAETQQGIFDAVLKGH 317
APE L Y E+DVW+ G++L+ G P+ + Q + V KG
Sbjct: 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG 332
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 90.7 bits (225), Expect = 1e-21
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 16/125 (12%)
Query: 379 KQFSAMNKLKKMALRVIAES-----------LSEEEIAGLKEMFKAMDTDNSGAITFDEL 427
K F + ++ L I E++ KE + D +N G I L
Sbjct: 13 KAFGILKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSL 72
Query: 428 KAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFD 487
K + + G E++ ++ S TI Y +F V++ +R L F+
Sbjct: 73 KRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDF----VNMMLGKRSAVL-KLVMMFE 127
Query: 488 KDGSG 492
+
Sbjct: 128 GKANE 132
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 6e-21
Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYG 531
E+ + FD + G I + L++ + T + ++ +I EV I Y
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 532 EFVAMMQKGNVGLGRRTM 549
+FV MM + + M
Sbjct: 107 DFVNMMLGKRSAVLKLVM 124
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 95.3 bits (237), Expect = 1e-21
Identities = 59/325 (18%), Positives = 95/325 (29%), Gaps = 90/325 (27%)
Query: 94 TDNIRDLYTLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRRE 149
DN+ L +G+G++G Y + +A K+ S + ++ E
Sbjct: 12 LDNL----KLLELIGRGRYGAVYKGSLDERPVAV------------KVFSFANRQNFINE 55
Query: 150 IQIMHHLAG--HKNIVTIKGA-------YEDSLCVHIVMELCAGGELFDRIIQRGHYSER 200
I + H NI +VME G L +
Sbjct: 56 KNIYR-VPLMEHDNIARFIVGDERVTADGRMEYL--LVMEYYPNGSLXKYL----SLHTS 108
Query: 201 KAAELTRIIVGVV------------EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248
R+ V + + HRDL N L+ +D + DFG
Sbjct: 109 DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV---KNDGTCVISDFG 165
Query: 249 LSVFFKPGQIF---------TDVVGSPYYVAPEVL--------LKHYGPEADVWTAGVIL 291
LS+ ++ VG+ Y+APEVL + + D++ G+I
Sbjct: 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIY 225
Query: 292 YILLSG----VPPFWAETQQGIFDAVLKGHIDFES---------------DPWPLISDSA 332
+ + P Q F + H FE + W S +
Sbjct: 226 WEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAV 285
Query: 333 ---KDLIRKMLCSQPSERLTAHEVL 354
K+ I RLTA
Sbjct: 286 RSLKETIEDCWDQDAEARLTAQXAE 310
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 2e-21
Identities = 63/319 (19%), Positives = 116/319 (36%), Gaps = 41/319 (12%)
Query: 23 HSNNSKRNTNSDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGI 82
H + +R + + +P L+ + + + K + + +I +
Sbjct: 12 HHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLSAL 71
Query: 83 DNQTYYVLGHKTDNIRDLY-TLGRKLGQGQFGTTYLCTEIATG---IEFACKSISKRKLI 138
+ + + H L +G+G FG Y T + I A KS+ ++
Sbjct: 72 NPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRIT 129
Query: 139 SREDVEDVRREIQIMHHLAGHKNIVTIKGA-YEDSLCVHIVMELCAGGELFDRIIQRGHY 197
+V E IM + H N++++ G +V+ G+L + I R
Sbjct: 130 DIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNET 186
Query: 198 SERKAAELTRIIVGVVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254
+L + V + L HRDL N +L D+ F++K DFGL+
Sbjct: 187 HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLA---- 239
Query: 255 PGQIFTDVVGSPYYV--------------APEVLLKH-YGPEADVWTAGVILYILLS-GV 298
D+ + A E L + ++DVW+ GV+L+ L++ G
Sbjct: 240 -----RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 294
Query: 299 PPFWAETQQGIFDAVLKGH 317
PP+ I +L+G
Sbjct: 295 PPYPDVNTFDITVYLLQGR 313
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 4e-21
Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 43/249 (17%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT---EIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
+TLGR LG+G+FG+ E + ++ A K + K +I+ D+E+ RE M
Sbjct: 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMK 80
Query: 155 HLAGHKNIVTIKGA------YEDSLCVHIVMELCAGGELFDRIIQRGHYSERKA---AEL 205
H ++ + G +++ G+L ++ L
Sbjct: 81 EF-DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 206 TRIIVGVVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDV 262
R +V + L HRDL N +L +D ++ DFGLS +
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCML---AEDMTVCVADFGLS---------RKI 187
Query: 263 VGSPYYV------------APEVLLKH-YGPEADVWTAGVILYILLS-GVPPFWAETQQG 308
YY A E L + Y +DVW GV ++ +++ G P+
Sbjct: 188 YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE 247
Query: 309 IFDAVLKGH 317
I++ ++ G+
Sbjct: 248 IYNYLIGGN 256
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 7e-21
Identities = 45/244 (18%), Positives = 76/244 (31%), Gaps = 39/244 (15%)
Query: 98 RDLYTLGRKLGQGQFGTTYL-------CTEIATGIEFACKSISKRKLISREDVEDVRREI 150
+ LGQG F + E K + R E
Sbjct: 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVL---DKAHRNYSESFFEAA 63
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIV 210
+M L+ HK++V G +V E G L + + + + +
Sbjct: 64 SMMSKLS-HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAK 120
Query: 211 GVVEACH---SLGVMHRDLKPENFLLVNKDDDFSL-----KAIDFGLSVFFKPGQIFTDV 262
+ A H ++H ++ +N LL+ ++D + K D G+S+ V
Sbjct: 121 QLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI---------TV 171
Query: 263 VGSPYY------VAPEVLL--KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAV 313
+ V PE + K+ D W+ G L+ + S G P A Q
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231
Query: 314 LKGH 317
H
Sbjct: 232 EDRH 235
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 8e-21
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 382 SAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT 441
++M + A LSEE IA K F D D G I+ EL +R G
Sbjct: 1 ASMTDQQAEA----RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE 56
Query: 442 EIRDLMDAADVDNSGTIDYGEFIA 465
E+ +++ D D SGTID+ EF+
Sbjct: 57 ELDAIIEEVDEDGSGTIDFEEFLV 80
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 6e-19
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 466 ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQD 523
A L++ E AAF FD DG G I+ EL N T L+ II EVD+D
Sbjct: 10 ARAFLSEEMIAE-FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED 68
Query: 524 NDGRIDYGEFVAMMQK 539
G ID+ EF+ MM +
Sbjct: 69 GSGTIDFEEFLVMMVR 84
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 89.1 bits (221), Expect = 8e-21
Identities = 24/161 (14%), Positives = 64/161 (39%), Gaps = 23/161 (14%)
Query: 399 LSEEEIAGLKEMFK--------AMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAA 450
L+++EI F ++++ + F+++ + + K+ I + +
Sbjct: 14 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKE-RICRVFSTS 72
Query: 451 DVDNSGTIDYGEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQ-------A 502
++ + +F+ +V + + AF+ FD D G + ++L +
Sbjct: 73 PAK--DSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGE 130
Query: 503 CAEHNMTDVLLEDI----IREVDQDNDGRIDYGEFVAMMQK 539
+ ++ ++ + + E D D DG I+ EF ++ +
Sbjct: 131 GEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 171
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 4e-06
Identities = 16/110 (14%), Positives = 39/110 (35%), Gaps = 11/110 (10%)
Query: 408 KEMFKAMDTDNS-GAITFDELKAGLRRY-GSTLKDTEIRDLMDAADVDNSGTIDYGEFI- 464
+ + + T + +++F++ L + + D + D D+ GT++ +
Sbjct: 63 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSR 122
Query: 465 --------AATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH 506
L+ E ++ + + D D G I + E Q +
Sbjct: 123 LVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 172
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 94.1 bits (234), Expect = 1e-20
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 18/228 (7%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R T+ KLG GQ+G Y + A K++ + +VE+ +E +M +
Sbjct: 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIK 274
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC- 216
H N+V + G +I+ E G L D + + E A L + + A
Sbjct: 275 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAME 332
Query: 217 --HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV---AP 271
+HR+L N L+ ++ +K DFGLS G +T G+ + + AP
Sbjct: 333 YLEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 388
Query: 272 EVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
E L + ++DVW GV+L+ + + G+ P+ +++ + K +
Sbjct: 389 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 436
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 3e-20
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 7/159 (4%)
Query: 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL 156
+ + Y LGRK+G G FG YL T+IA G E A K + + + E +I +
Sbjct: 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ-----LHIESKIYKMM 61
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFD-RIIQRGHYSERKAAELTRIIVGVVEA 215
G I TI+ + +VMEL G L D +S + L ++ +E
Sbjct: 62 QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254
HS +HRD+KP+NFL+ + IDFGL+ ++
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 3e-20
Identities = 61/248 (24%), Positives = 100/248 (40%), Gaps = 42/248 (16%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
R TL R LG G FG Y +G+ A K++ ++ S +D D E
Sbjct: 70 RKNITLIRGLGHGAFGEVYEG--QVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEA 125
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAA----ELT 206
I+ H+NIV G SL I++EL AGG+L + + + ++ +L
Sbjct: 126 LIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 184
Query: 207 RIIVGVVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV 263
+ + C L HRD+ N LL K DFG++ D+
Sbjct: 185 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDIY 235
Query: 264 GSPYYV------------APEVLLKH-YGPEADVWTAGVILYILLS-GVPPFWAETQQGI 309
+ YY PE ++ + + D W+ GV+L+ + S G P+ +++ Q +
Sbjct: 236 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 295
Query: 310 FDAVLKGH 317
+ V G
Sbjct: 296 LEFVTSGG 303
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 83.3 bits (207), Expect = 4e-20
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 482 AFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
F+ FDK+ G +++DE ++ T + E+D D +G ++ EF + ++K
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 83.3 bits (207), Expect = 4e-20
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFI 464
+ K +F+ D + G ++ DE + + +I + DVD +G ++ EF
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60
Query: 465 A 465
+
Sbjct: 61 S 61
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 6e-20
Identities = 58/248 (23%), Positives = 100/248 (40%), Gaps = 42/248 (16%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT---EIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
R+L LG+ LG+G+FG+ E T ++ A K++ K S+ ++E+ E M
Sbjct: 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM-KLDNSSQREIEEFLSEAACMK 91
Query: 155 HLAGHKNIVTIKGA--YEDSLCVH---IVMELCAGGELFDRIIQRGHYSERKA---AELT 206
H N++ + G S + +++ G+L ++ + K L
Sbjct: 92 DF-SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 207 RIIVGVVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV 263
+ +V + L HRDL N +L DD ++ DFGLS +
Sbjct: 151 KFMVDIALGMEYLSNRNFLHRDLAARNCML---RDDMTVCVADFGLS---------KKIY 198
Query: 264 GSPYYV------------APEVLLKH-YGPEADVWTAGVILYILLS-GVPPFWAETQQGI 309
YY A E L Y ++DVW GV ++ + + G+ P+ +
Sbjct: 199 SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258
Query: 310 FDAVLKGH 317
+D +L GH
Sbjct: 259 YDYLLHGH 266
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 85.7 bits (212), Expect = 6e-20
Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Query: 444 RDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQAC 503
+ + N +D ++ + + E + FD +G+G I + L++
Sbjct: 18 AQQEERLEGINKQFLDDPKYSNDE---DLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRML 74
Query: 504 AE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTM 549
+ T + L+ +IREV ++ Y +F+ MM + R +
Sbjct: 75 EKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGKRSAILRMIL 122
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 83.8 bits (207), Expect = 3e-19
Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 379 KQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTL 438
++ +NK + + ++ K + D + +G I LK L + G
Sbjct: 22 ERLEGINKQFLDDPKYSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPK 81
Query: 439 KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKD 489
E++ L+ + T Y +F+ + L K ++ ++ +K+
Sbjct: 82 THLELKRLIREVSSGSEETFSYSDFLR--MMLGKRSAILRMILMYEEKNKE 130
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 6e-20
Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 42/248 (16%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
R TL R LG G FG Y +G+ A K++ ++ S +D D E
Sbjct: 29 RKNITLIRGLGHGAFGEVYEGQ--VSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEA 84
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAA----ELT 206
I+ H+NIV G SL I+MEL AGG+L + + + ++ +L
Sbjct: 85 LIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 207 RIIVGVVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV 263
+ + C L HRD+ N LL K DFG++ D+
Sbjct: 144 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDIY 194
Query: 264 GSPYYV------------APEVLLKH-YGPEADVWTAGVILYILLS-GVPPFWAETQQGI 309
+ YY PE ++ + + D W+ GV+L+ + S G P+ +++ Q +
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 254
Query: 310 FDAVLKGH 317
+ V G
Sbjct: 255 LEFVTSGG 262
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 8e-20
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 21/232 (9%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATG----IEFACKSISKRKLISREDVEDVRREIQIM 153
+ + LG G FGT Y I G I A K + R+ S + +++ E +M
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVM 71
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
+ + ++ + G S V ++ +L G L D + R H + L V +
Sbjct: 72 ASVD-NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIA 127
Query: 214 EACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV- 269
+ + ++HRDL N L+ +K DFGL+ + G +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 270 --APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
A E +L + Y ++DVW+ GV ++ L++ G P+ I + KG
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 8e-20
Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 40/243 (16%)
Query: 98 RDLYTLGRKLGQGQFGTTY---LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
+ +G+G FG Y L I A KS+ ++ +V E IM
Sbjct: 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMK 81
Query: 155 HLAGHKNIVTIKGA-YEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
H N++++ G +V+ G+L + I R +L + V
Sbjct: 82 DF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVA 138
Query: 214 EACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV- 269
+ L HRDL N +L D+ F++K DFGL+ D+ YY
Sbjct: 139 KGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA---------RDMYDKEYYSV 186
Query: 270 -------------APEVLLKH-YGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVL 314
A E L + ++DVW+ GV+L+ L++ G PP+ I +L
Sbjct: 187 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 246
Query: 315 KGH 317
+G
Sbjct: 247 QGR 249
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 88.8 bits (221), Expect = 9e-20
Identities = 57/236 (24%), Positives = 93/236 (39%), Gaps = 36/236 (15%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
T ++LG GQFG + A K I + ++ E ++M +L+
Sbjct: 23 PKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKE----GSMSEDEFIEEAKVMMNLS 77
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH 217
H+ +V + G + I+ E A G L + + R + +L + V EA
Sbjct: 78 -HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAME 134
Query: 218 ---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV----- 269
S +HRDL N LVN D +K DFGLS V+ Y
Sbjct: 135 YLESKQFLHRDLAARN-CLVN--DQGVVKVSDFGLS---------RYVLDDEYTSSVGSK 182
Query: 270 ------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
PEVL+ + ++D+W GV+++ + S G P+ T + + +G
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 1e-19
Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 36/236 (15%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
T +++G GQFG +L + + A K+I + ED E ++M L+
Sbjct: 7 PSELTFVQEIGSGQFGLVHLGYWLNK-DKVAIKTIRE----GAMSEEDFIEEAEVMMKLS 61
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH 217
H +V + G + + +V E G L D + R A L + + V E
Sbjct: 62 -HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMA 118
Query: 218 ---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV----- 269
V+HRDL N LV ++ +K DFG++ V+ Y
Sbjct: 119 YLEEACVIHRDLAARN-CLVG--ENQVIKVSDFGMT---------RFVLDDQYTSSTGTK 166
Query: 270 ------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
+PEV Y ++DVW+ GV+++ + S G P+ + + + + G
Sbjct: 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 222
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 1e-19
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ LGRK+G G FG YL T I T E A K + + + + E +I L G
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-----LLYESKIYRILQGGT 63
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFD-RIIQRGHYSERKAAELTRIIVGVVEACHSL 219
I ++ + +VM+L G L D S + L ++ VE HS
Sbjct: 64 GIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 122
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254
+HRD+KP+NFL+ + IDFGL+ ++
Sbjct: 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 2e-19
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ TL ++LG GQFG L + A K I + ++ +E Q M L+
Sbjct: 7 REEITLLKELGSGQFGVVKLGK-WKGQYDVAVKMIKE----GSMSEDEFFQEAQTMMKLS 61
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH 217
H +V G ++IV E + G L + + R H + ++L + V E
Sbjct: 62 -HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 218 ---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV----- 269
S +HRDL N LV+ D +K DFG++ V+ Y
Sbjct: 119 FLESHQFIHRDLAARN-CLVD--RDLCVKVSDFGMT---------RYVLDDQYVSSVGTK 166
Query: 270 ------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
APEV Y ++DVW G++++ + S G P+ T + V +GH
Sbjct: 167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH 222
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 2e-19
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 18/228 (7%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R T+ KLG GQ+G Y + A K++ + +VE+ +E +M +
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIK 67
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH 217
H N+V + G +I+ E G L D ++ + E A L + + A
Sbjct: 68 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAME 125
Query: 218 ---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV---AP 271
+HRDL N LV ++ +K DFGLS G +T G+ + + AP
Sbjct: 126 YLEKKNFIHRDLAARN-CLVG--ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 272 EVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
E L + ++DVW GV+L+ + + G+ P+ +++ + K +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 3e-19
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 30/231 (12%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDV--EDVRREIQIMHH 155
L + +G+G+FG L G + A K I + D + E +M
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGD--YRGNKVAVKCI-------KNDATAQAFLAEASVMTQ 70
Query: 156 LAGHKNIVTIKGA-YEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
L H N+V + G E+ ++IV E A G L D + RG S L + + V E
Sbjct: 71 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCE 128
Query: 215 ACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV-- 269
A +HRDL N +LV+ +D K DFGL+ + + V
Sbjct: 129 AMEYLEGNNFVHRDLAARN-VLVS--EDNVAKVSDFGLT-----KEASSTQDTGKLPVKW 180
Query: 270 -APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
APE L K + ++DVW+ G++L+ + S G P+ + + V KG+
Sbjct: 181 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY 231
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 4e-19
Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 30/231 (12%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDV--EDVRREIQIMHH 155
L + +G+G+FG L G + A K I + D + E +M
Sbjct: 192 MKELKLLQTIGKGEFGDVMLGD--YRGNKVAVKCI-------KNDATAQAFLAEASVMTQ 242
Query: 156 LAGHKNIVTIKGA-YEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
L H N+V + G E+ ++IV E A G L D + RG S L + + V E
Sbjct: 243 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCE 300
Query: 215 ACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGS--PY-Y 268
A L HRDL N L+ +D K DFGL+ + + P +
Sbjct: 301 AMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT-----KEASSTQDTGKLPVKW 352
Query: 269 VAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
APE L K + ++DVW+ G++L+ + S G P+ + + V KG+
Sbjct: 353 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY 403
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 4e-19
Identities = 52/251 (20%), Positives = 96/251 (38%), Gaps = 48/251 (19%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
R+ T+ R+LGQG FG Y A G+ A K++ + S + + E
Sbjct: 24 REKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEA 79
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAA------- 203
+M ++V + G ++MEL G+L +
Sbjct: 80 SVMKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 204 ELTRIIVGVVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT 260
++ ++ + + L HRDL N ++ +DF++K DFG++
Sbjct: 139 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMT---------R 186
Query: 261 DVVGSPYYV------------APEVLLKH-YGPEADVWTAGVILY-ILLSGVPPFWAETQ 306
D+ + YY +PE L + +DVW+ GV+L+ I P+ +
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246
Query: 307 QGIFDAVLKGH 317
+ + V++G
Sbjct: 247 EQVLRFVMEGG 257
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 4e-19
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 44/234 (18%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
+LG+G FG+ LC TG A K + + + D +REIQI+
Sbjct: 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL---QHSGPDQQRDFQREIQIL 78
Query: 154 HHLAGHKNIVTIKG----AYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII 209
L IV +G SL +VME G L D + + H + A+ L
Sbjct: 79 KAL-HSDFIVKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFL--QRHRARLDASRLLLYS 133
Query: 210 VGVVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSP 266
+ + LG HRDL N L+ + + +K DFGL+ +
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLLP--------LDKD 182
Query: 267 YYVAPE---VLLKHYGPEA----------DVWTAGVILYILLS-GVPPFWAETQ 306
YYV E + Y PE+ DVW+ GV+LY L + +
Sbjct: 183 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 236
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 5e-19
Identities = 52/232 (22%), Positives = 87/232 (37%), Gaps = 21/232 (9%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATG----IEFACKSISKRKLISREDVEDVRREIQIM 153
+ LG G FGT + I G I K I R+ + V + +
Sbjct: 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAI 69
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
L H +IV + G S + +V + G L D + R H L V +
Sbjct: 70 GSLD-HAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHV--RQHRGALGPQLLLNWGVQIA 125
Query: 214 EACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV- 269
+ + G++HR+L N LL ++ DFG++ P + +
Sbjct: 126 KGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 270 --APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
A E + Y ++DVW+ GV ++ L++ G P+ + D + KG
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE 234
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 5e-19
Identities = 63/242 (26%), Positives = 88/242 (36%), Gaps = 43/242 (17%)
Query: 98 RDLYTLGRKLGQGQFGTTY---LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
L KLG G FG + A K + L E ++D RE+ MH
Sbjct: 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 76
Query: 155 HLAGHKNIVTIKGAYEDSLC----VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIV 210
L H+N++ + G + + +V EL G L DR+ R H L+R V
Sbjct: 77 SLD-HRNLIRLYG-----VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAV 128
Query: 211 GVVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY 267
V E L HRDL N LL +D +K DFGL +
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQ--------NDDH 177
Query: 268 YV------------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAV 313
YV APE L + + +D W GV L+ + + G P+ I +
Sbjct: 178 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
Query: 314 LK 315
K
Sbjct: 238 DK 239
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 5e-19
Identities = 59/245 (24%), Positives = 95/245 (38%), Gaps = 49/245 (20%)
Query: 98 RDLYTLGRKLGQGQFGTTY---LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
R+ L R LG+G FG Y I A K+ +K + ++ E E IM
Sbjct: 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKDCTLDNKEKFMSEAVIMK 68
Query: 155 HLAGHKNIVTIKGAYEDSLC----VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIV 210
+L H +IV + G + I+MEL GEL + + + K L +
Sbjct: 69 NLD-HPHIVKLIG-----IIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSL 120
Query: 211 GVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY 267
+ +A S+ +HRD+ N L+ +K DFGLS + Y
Sbjct: 121 QICKAMAYLESINCVHRDIAVRNILV---ASPECVKLGDFGLS---------RYIEDEDY 168
Query: 268 YV-----------APEVLLKHYG---PEADVWTAGVILYILLS-GVPPFWAETQQGIFDA 312
Y +PE + ++ +DVW V ++ +LS G PF+ + +
Sbjct: 169 YKASVTRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV 226
Query: 313 VLKGH 317
+ KG
Sbjct: 227 LEKGD 231
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 6e-19
Identities = 51/239 (21%), Positives = 96/239 (40%), Gaps = 33/239 (13%)
Query: 98 RDLYTLGRKLGQGQFGT----TYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
T + +G G+FG + + A K++ + + + D E IM
Sbjct: 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGIM 100
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
+ H NI+ ++G + I+ E G L + R E +L ++ G+
Sbjct: 101 GQFS-HHNIIRLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIA 157
Query: 214 EACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV- 269
++ +HRDL N +LVN + K DFGLS ++ D + Y
Sbjct: 158 AGMKYLANMNYVHRDLAARN-ILVN--SNLVCKVSDFGLS------RVLEDDPEATYTTS 208
Query: 270 ---------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
APE + + + +DVW+ G++++ +++ G P+W + + A+ G
Sbjct: 209 GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF 267
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 6e-19
Identities = 60/243 (24%), Positives = 90/243 (37%), Gaps = 45/243 (18%)
Query: 98 RDLYTLGRKLGQGQFGTTY---LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
R+ LGR +G+GQFG + + + A K+ + S E +E M
Sbjct: 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--KNCTSDSVREKFLQEALTMR 71
Query: 155 HLAGHKNIVTIKGAYEDSLC----VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIV 210
H +IV + G + V I+MELC GEL + + A L
Sbjct: 72 QFD-HPHIVKLIG-----VITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAY 123
Query: 211 GVVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY 267
+ A L HRD+ N L+ + +K DFGLS + S Y
Sbjct: 124 QLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLS---------RYMEDSTY 171
Query: 268 YV-----------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVL 314
Y APE + + + +DVW GV ++ +L GV PF + +
Sbjct: 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 231
Query: 315 KGH 317
G
Sbjct: 232 NGE 234
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 7e-19
Identities = 54/229 (23%), Positives = 90/229 (39%), Gaps = 50/229 (21%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
R+ G+ LG G FG T A G+ A K + + ++ E + E+
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEAT--AFGLGKEDAVLKVAVKML--KSTAHADEKEALMSEL 100
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFD------RIIQRGHYSERKAAE 204
+IM HL H+NIV + GA V ++ E C G+L + R+++ +
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 205 LT-----RIIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256
+ V + S +HRD+ N LL + K DFGL+
Sbjct: 161 ASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL---TNGHVAKIGDFGLA------ 211
Query: 257 QIFTDVVGSPYYV------------APEVLLKH-YGPEADVWTAGVILY 292
D++ Y+ APE + Y ++DVW+ G++L+
Sbjct: 212 ---RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 257
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 89.1 bits (221), Expect = 9e-19
Identities = 73/309 (23%), Positives = 115/309 (37%), Gaps = 38/309 (12%)
Query: 29 RNTNSDCTNSDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYY 88
R N + + L S N K+ + +S S+ D+ + TY
Sbjct: 319 RLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYT 378
Query: 89 VLGHKTDNI-RDLYTLGRKLGQGQFGTTY---LCTEIATGIEFACKSISKRKLISREDVE 144
+ + I R+ LGR +G+GQFG + + + A K+ + S E
Sbjct: 379 MPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC--KNCTSDSVRE 436
Query: 145 DVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAE 204
+E M H +IV + G ++ V I+MELC GEL + + A
Sbjct: 437 KFLQEALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFL--QVRKFSLDLAS 492
Query: 205 LTRIIVGVVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD 261
L + A L HRD+ N +LV+ + +K DFGLS
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIAARN-VLVS--SNDCVKLGDFGLS---------RY 540
Query: 262 VVGSPYYV-----------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQG 308
+ S YY APE + + + +DVW GV ++ +L GV PF
Sbjct: 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
Query: 309 IFDAVLKGH 317
+ + G
Sbjct: 601 VIGRIENGE 609
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 1e-18
Identities = 54/233 (23%), Positives = 82/233 (35%), Gaps = 54/233 (23%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
R+ + G+ LG G FG T A G+ A K + + + E + E+
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEAT--AYGLIKSDAAMTVAVKML--KPSAHLTEREALMSEL 77
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFD---------------RIIQRG 195
+++ +L H NIV + GA ++ E C G+L + I
Sbjct: 78 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 137
Query: 196 HYSERKAAELTRIIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252
+L V + S +HRDL N LL K DFGL+
Sbjct: 138 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLA-- 192
Query: 253 FKPGQIFTDVVGSPYYV------------APEVLLKH-YGPEADVWTAGVILY 292
D+ YV APE + Y E+DVW+ G+ L+
Sbjct: 193 -------RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 238
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 1e-18
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 21/232 (9%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATG----IEFACKSISKRKLISREDVEDVRREIQIM 153
+ + LG G FGT Y I G I A K + R+ S + +++ E +M
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVM 71
Query: 154 HHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
+ + ++ + G S V ++ +L G L D + R H + L V +
Sbjct: 72 ASVD-NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIA 127
Query: 214 EACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV- 269
+ + ++HRDL N L+ +K DFGL+ + G +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 270 --APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
A E +L + Y ++DVW+ GV ++ L++ G P+ I + KG
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 1e-18
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 38/221 (17%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
+ R LG+G FG LC TG + A KS+ + + D+++EI+I+
Sbjct: 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL--KPESGGNHIADLKKEIEIL 77
Query: 154 HHLAGHKNIVTIKGAYEDSLC--VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
+L H+NIV KG + + ++ME G L + + + ++ + + V
Sbjct: 78 RNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQ 134
Query: 212 VVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYY 268
+ + LG HRDL N L+ + + +K DFGL+ + YY
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIE--------TDKEYY 183
Query: 269 V------------APEVLLKH-YGPEADVWTAGVILYILLS 296
APE L++ + +DVW+ GV L+ LL+
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 2e-18
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL 156
+ Y +GR++G+G FG + T + + A K +R + +R E + L
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQ-----LRDEYRTYKLL 62
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFD-RIIQRGHYSERKAAELTRIIVGVVEA 215
AG I + ++ L +V++L G L D + +S + A + ++ V++
Sbjct: 63 AGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQS 121
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFS--LKAIDFGLSVFFK 254
H +++RD+KP+NFL+ + + + +DFG+ F++
Sbjct: 122 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 2e-18
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 473 LEREEHLVAAFQYFD-KDG-SGYITVDELQQACAE--HNMTDVL--LEDIIREVDQDNDG 526
++ E + AF+ F K+G I+ +EL+ ++ + L+++I EVD++ DG
Sbjct: 1 MKSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDG 60
Query: 527 RIDYGEFVAMMQK 539
+ + EF+ MM+K
Sbjct: 61 EVSFEEFLVMMKK 73
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 1e-11
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 400 SEEEIAGLKEMFKAMDTD--NSGAITFDELKAGLRRYGSTLKDT--EIRDLMDAADVDNS 455
S EE +K F+ + I+ +ELK ++ G +L + ++++ D +
Sbjct: 3 SPEE---IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGD 59
Query: 456 GTIDYGEFIA 465
G + + EF+
Sbjct: 60 GEVSFEEFLV 69
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 2e-18
Identities = 26/176 (14%), Positives = 66/176 (37%), Gaps = 25/176 (14%)
Query: 386 KLKKMALRVIAES--LSEEEIAGLKEMFKAM--------DTDNSGAITFDELKAGLRRYG 435
+L K L + L+++EI F + ++ + F+++ +
Sbjct: 30 RLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKA 89
Query: 436 STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL-EREEHLVAAFQYFDKDGSGYI 494
+ K+ I + + ++ + +F+ + + AF+ FD D G +
Sbjct: 90 NPFKE-RICRVFSTSPAK--DSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTL 146
Query: 495 TVDELQQ-------ACAEHNMTDVLLEDI----IREVDQDNDGRIDYGEFVAMMQK 539
++L + + ++ ++ + + E D D DG I+ EF ++ +
Sbjct: 147 NREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 202
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 9e-05
Identities = 16/110 (14%), Positives = 38/110 (34%), Gaps = 11/110 (10%)
Query: 408 KEMFKAMDTDNS-GAITFDELKAGL-RRYGSTLKDTEIRDLMDAADVDNSGTIDYGEF-- 463
+ + + T + +++F++ L + D + D D+ GT++ +
Sbjct: 94 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSR 153
Query: 464 -------IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH 506
L+ E ++ + + D D G I + E Q +
Sbjct: 154 LVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 203
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-18
Identities = 55/239 (23%), Positives = 91/239 (38%), Gaps = 34/239 (14%)
Query: 98 RDLYTLGRKLGQGQFGTTY---LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
+ + +G G G L + A K++ + + D E IM
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL--KAGYTERQRRDFLSEASIMG 105
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
H NI+ ++G IV E G L + R H + +L ++ GV
Sbjct: 106 QFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGA 162
Query: 215 ACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV-- 269
LG +HRDL N L+ D + K DFGLS + Y
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDP-------DAAYTTT 212
Query: 270 ---------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
APE + + + +DVW+ GV+++ +L+ G P+W T + + +V +G+
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 3e-18
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 18/227 (7%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L KLGQG FG ++ T A K++ E +E Q+M L
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGT-WNGTTRVAIKTLKP----GTMSPEAFLQEAQVMKKLR 237
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH 217
H+ +V + + ++IV E + G L D + + +L + +
Sbjct: 238 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMA 294
Query: 218 SLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGS-PY-YVAPE 272
+ M HRDL+ N L+ ++ K DFGL+ + + P + APE
Sbjct: 295 YVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 273 VLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
L + ++DVW+ G++L L + G P+ + + D V +G+
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 398
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 3e-18
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 28/232 (12%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L +LG GQFG ++ + A KS+ + + E +M L
Sbjct: 12 RETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQ----GSMSPDAFLAEANLMKQLQ 66
Query: 158 GHKNIVTIKGAYEDSLC----VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
H+ +V + ++I+ E G L D + + +L + +
Sbjct: 67 -HQRLVRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIA 119
Query: 214 EACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGS--PY- 267
E +HRDL+ N +LV+ D S K DFGL+ + +T G+ P
Sbjct: 120 EGMAFIEERNYIHRDLRAAN-ILVS--DTLSCKIADFGLARLIE-DNEYTAREGAKFPIK 175
Query: 268 YVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
+ APE + + ++DVW+ G++L +++ G P+ T + + +G+
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 227
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 3e-18
Identities = 56/260 (21%), Positives = 95/260 (36%), Gaps = 59/260 (22%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
++LG+G FG+ +C + TG A K + + + E + D REI+I+
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEIL 65
Query: 154 HHLAGHKNIVTIKG----AYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII 209
L H NIV KG A +L ++ME G L D + + H +L +
Sbjct: 66 KSLQ-HDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL--QKHKERIDHIKLLQYT 120
Query: 210 VGVVEAC---HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSP 266
+ + + +HRDL N L+ +++ +K DFGL+
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTKVLP--------QDKE 169
Query: 267 YYV------------APEVLL-KHYGPEADVWTAGVILYILLS----------------G 297
++ APE L + +DVW+ GV+LY L + G
Sbjct: 170 FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 229
Query: 298 VPPFWAETQQGIFDAVLKGH 317
+ + +
Sbjct: 230 NDKQGQMIVFHLIELLKNNG 249
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 4e-18
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 9/157 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ +G+K+G G FG L + T A K + K + E + L
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMK----SRAPQLHLEYRFYKQLGSGD 65
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFD-RIIQRGHYSERKAAELTRIIVGVVEACHSL 219
I + +V+EL G L D + +S + + ++ +E HS
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 220 GVMHRDLKPENFLL--VNKDDDFSLKAIDFGLSVFFK 254
+++RD+KPENFL+ + IDF L+ +
Sbjct: 125 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 5e-18
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 43/223 (19%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
++LG+G FG+ +C + TG A K + + + E + D REI+I+
Sbjct: 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEIL 96
Query: 154 HHLAGHKNIVTIKG----AYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII 209
L H NIV KG A +L ++ME G L D + + H +L +
Sbjct: 97 KSLQ-HDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL--QKHKERIDHIKLLQYT 151
Query: 210 VGVVEAC---HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSP 266
+ + + +HRDL N L+ +++ +K DFGL+
Sbjct: 152 SQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTKVLP--------QDKE 200
Query: 267 YYV------------APEVLLKH-YGPEADVWTAGVILYILLS 296
YY APE L + + +DVW+ GV+LY L +
Sbjct: 201 YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 86.1 bits (213), Expect = 6e-18
Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 36/236 (15%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L KLGQG FG ++ T A K++ E +E Q+M L
Sbjct: 266 RESLRLEVKLGQGCFGEVWMGT-WNGTTRVAIKTLKP----GTMSPEAFLQEAQVMKKLR 320
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH 217
H+ +V + + ++IV E + G L D + + +L + +
Sbjct: 321 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMA 377
Query: 218 SLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV----- 269
+ M HRDL+ N L+ ++ K DFGL+ + + Y
Sbjct: 378 YVERMNYVHRDLRAANILV---GENLVCKVADFGLAR---------LIEDNEYTARQGAK 425
Query: 270 ------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
APE L + ++DVW+ G++L L + G P+ + + D V +G+
Sbjct: 426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 481
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 6e-18
Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 40/243 (16%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATG---IEFACKSISKRKLISREDVEDVRREIQIMH 154
R + R +G+G FG Y I I+ A KS+ ++ + VE RE +M
Sbjct: 20 RVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SRITEMQQVEAFLREGLLMR 77
Query: 155 HLAGHKNIVTIKGA-YEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
L H N++ + G H+++ G+L I R +L + V
Sbjct: 78 GLN-HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI--RSPQRNPTVKDLISFGLQVA 134
Query: 214 EACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV- 269
L HRDL N +L D+ F++K DFGL+ D++ YY
Sbjct: 135 RGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLA---------RDILDREYYSV 182
Query: 270 -------------APEVLLKH-YGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVL 314
A E L + + ++DVW+ GV+L+ LL+ G PP+ + +
Sbjct: 183 QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA 242
Query: 315 KGH 317
+G
Sbjct: 243 QGR 245
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 6e-18
Identities = 62/240 (25%), Positives = 96/240 (40%), Gaps = 37/240 (15%)
Query: 98 RDLYTLGR-KLGQGQFGTTY--LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
RD + +LG G FG+ + I+ A K + ++ + D E++ RE QIMH
Sbjct: 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMH 65
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
L + IV + G + + +VME+ GG L + G E + + ++ V
Sbjct: 66 QLD-NPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSM 121
Query: 215 ACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV-- 269
L HRDL N LLVN+ K DFGLS YY
Sbjct: 122 GMKYLEEKNFVHRDLAARNVLLVNRH---YAKISDFGLSKALG--------ADDSYYTAR 170
Query: 270 ----------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
APE + + + +DVW+ GV ++ LS G P+ + + +G
Sbjct: 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 230
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 6e-18
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 55/259 (21%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF---------ACKSISKRKLISREDVEDVRR 148
RD TLG+ LG+G FG + A GI+ A K + + + +D+ D+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAE--AVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVS 89
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGEL-------------FDRIIQRG 195
E+++M + HKNI+ + GA +++++E + G L + I R
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 196 HYSERKAAELTRIIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252
+ +L + S +HRDL N L+ ++ +K DFGL+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLA-- 204
Query: 253 FKPGQIFTDVVGSPYYV------------APEVLLKH-YGPEADVWTAGVILY-ILLSGV 298
D+ YY APE L Y ++DVW+ GV+++ I G
Sbjct: 205 -------RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 299 PPFWAETQQGIFDAVLKGH 317
P+ + +F + +GH
Sbjct: 258 SPYPGIPVEELFKLLKEGH 276
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 7e-18
Identities = 61/259 (23%), Positives = 106/259 (40%), Gaps = 55/259 (21%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF---------ACKSISKRKLISREDVEDVRR 148
RD TLG+ LG+G FG + A GI+ A K + + + +D+ D+
Sbjct: 80 RDKLTLGKPLGEGCFGQVVMAE--AVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVS 135
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFD-----RIIQRGHYSERKAA 203
E+++M + HKNI+ + GA +++++E + G L + R + +
Sbjct: 136 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 195
Query: 204 --------ELTRIIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252
+L + S +HRDL N L+ ++ +K DFGL+
Sbjct: 196 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLA-- 250
Query: 253 FKPGQIFTDVVGSPYYV------------APEVLLKH-YGPEADVWTAGVILY-ILLSGV 298
D+ YY APE L Y ++DVW+ GV+++ I G
Sbjct: 251 -------RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 303
Query: 299 PPFWAETQQGIFDAVLKGH 317
P+ + +F + +GH
Sbjct: 304 SPYPGIPVEELFKLLKEGH 322
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 9e-18
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 32/238 (13%)
Query: 98 RDLYTLGRKLGQGQFGTTY---LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
++ + +G G+FG L I A K++ + + + D E IM
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMG 101
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
H NI+ ++G S V IV E G L + R H ++ +L ++ G+
Sbjct: 102 QFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIAS 158
Query: 215 ACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV-- 269
+G +HRDL N +L+N + K DFGL ++ D + Y
Sbjct: 159 GMKYLSDMGYVHRDLAARN-ILIN--SNLVCKVSDFGLG------RVLEDDPEAAYTTRG 209
Query: 270 --------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
+PE + + + +DVW+ G++L+ ++S G P+W + Q + AV +G+
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 1e-17
Identities = 63/221 (28%), Positives = 87/221 (39%), Gaps = 40/221 (18%)
Query: 98 RDLYTLGRKLGQGQFGTTYLC----TEIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
+ R LG+G FG L T TG A K++ + + ++EI I+
Sbjct: 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADAGPQHRSGWKQEIDIL 87
Query: 154 HHLAGHKNIVTIKGAYEDSLC--VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
L H++I+ KG ED+ + +VME G L D + H A+L
Sbjct: 88 RTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRH--SIGLAQLLLFAQQ 142
Query: 212 VVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYY 268
+ E L HRDL N LL D+D +K DFGL+ G YY
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVP--------EGHEYY 191
Query: 269 VAPE---VLLKHYGPEA----------DVWTAGVILYILLS 296
E + Y PE DVW+ GV LY LL+
Sbjct: 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 1e-17
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 22/229 (9%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L +KLG GQFG ++ T + A K++ VE E +M L
Sbjct: 187 RESLKLEKKLGAGQFGEVWMAT-YNKHTKVAVKTMKP----GSMSVEAFLAEANVMKTLQ 241
Query: 158 GHKNIVTIKGA-YEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
H +V + ++ + I+ E A G L D + S++ +L + E
Sbjct: 242 -HDKLVKLHAVVTKEPIY--IITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGM 297
Query: 217 HSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV---A 270
+ HRDL+ N L+ K DFGL+ + +T G+ + + A
Sbjct: 298 AFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTA 353
Query: 271 PEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
PE + + ++DVW+ G++L +++ G P+ + + A+ +G+
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 402
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 1e-17
Identities = 55/242 (22%), Positives = 86/242 (35%), Gaps = 44/242 (18%)
Query: 99 DLYTLGRKLGQGQFGTTY--LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL 156
L ++LG G FGT A K + K + +++ E +M L
Sbjct: 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQL 75
Query: 157 AGHKNIVTIKGAYEDSLC----VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGV 212
+ IV + G +C +VME+ G L + Q H + ++ V
Sbjct: 76 D-NPYIVRMIG-----ICEAESWMLVMEMAELGPLNKYLQQNRHVK---DKNIIELVHQV 126
Query: 213 VEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV 269
L HRDL N LLV + K DFGLS + + YY
Sbjct: 127 SMGMKYLEESNFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADE--------NYYK 175
Query: 270 ------------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLK 315
APE + + ++DVW+ GV+++ S G P+ + + K
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 235
Query: 316 GH 317
G
Sbjct: 236 GE 237
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 60/261 (22%), Positives = 98/261 (37%), Gaps = 59/261 (22%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
RD LG+ LG+G FG A GI+ A K + ++ + + + E+
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEAD--AFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL 81
Query: 151 QIMHHLAGHKNIVTIKGA---YEDSLCVHIVMELCAGGEL-------------FDRIIQR 194
+I+ H+ H N+V + GA L +++E C G L + +
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLM--VIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 195 GHYSERKAAELTRIIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251
+ L V + S +HRDL N LL + +K DFGL+
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA- 195
Query: 252 FFKPGQIFTDVVGSPYYV------------APEVLLKH-YGPEADVWTAGVILY-ILLSG 297
D+ P YV APE + Y ++DVW+ GV+L+ I G
Sbjct: 196 --------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 247
Query: 298 VPPFWA-ETQQGIFDAVLKGH 317
P+ + + + +G
Sbjct: 248 ASPYPGVKIDEEFCRRLKEGT 268
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 78.1 bits (192), Expect = 2e-17
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 23/115 (20%)
Query: 425 DELKAGLRRYGSTLKDTEIR-DLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAF 483
+ L+ + + + + E++ D D + +D E A H++K E E
Sbjct: 51 EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQ----- 105
Query: 484 QYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
+ ++ DEL +++ ++R+ D++NDG IDY EF +Q
Sbjct: 106 -------APLMSEDELIN----------IIDGVLRDDDKNNDGYIDYAEFAKSLQ 143
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 3e-17
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 51/257 (19%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKR---KLI----SREDVEDVRREI 150
RD LG+ LG+G FG L A G++ + + K++ + +D+ D+ E+
Sbjct: 68 RDRLVLGKPLGEGAFGQVVLAE--AIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 125
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGEL-------------FDRIIQRGHY 197
++M + HKNI+ + GA +++++E + G L +
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 198 SERKAAELTRIIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254
+ + +L V S +HRDL N L+ +D +K DFGL+
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLA---- 238
Query: 255 PGQIFTDVVGSPYYV------------APEVLLKH-YGPEADVWTAGVILY-ILLSGVPP 300
D+ YY APE L Y ++DVW+ GV+L+ I G P
Sbjct: 239 -----RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
Query: 301 FWAETQQGIFDAVLKGH 317
+ + +F + +GH
Sbjct: 294 YPGVPVEELFKLLKEGH 310
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 3e-17
Identities = 40/182 (21%), Positives = 68/182 (37%), Gaps = 24/182 (13%)
Query: 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIM 153
D + + LG+K+G G FG YL + A + + ++ + E++
Sbjct: 32 DDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVK----VEYQENGPLFSELKFY 87
Query: 154 HHLAGHKNIVTIK----------------GAYEDSLCVH--IVMELCAGGELFDRIIQRG 195
+A I G E + +VME G +L Q G
Sbjct: 88 QRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG 146
Query: 196 HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255
+ + +L ++ V+E H +H D+K N LL K+ D + D+GLS + P
Sbjct: 147 TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD-QVYLADYGLSYRYCP 205
Query: 256 GQ 257
Sbjct: 206 NG 207
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 83.1 bits (205), Expect = 7e-17
Identities = 60/238 (25%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 99 DLYTLGRKLGQGQFGTTY--LCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL 156
+L +LG G FG+ + I+ A K + ++ + D E++ RE QIMH L
Sbjct: 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQL 393
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
+ IV + G + + +VME+ GG L + G E + + ++ V
Sbjct: 394 -DNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGM 449
Query: 217 HSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV---- 269
L HR+L N LLVN+ K DFGLS YY
Sbjct: 450 KYLEEKNFVHRNLAARNVLLVNRH---YAKISDFGLSKALG--------ADDSYYTARSA 498
Query: 270 --------APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317
APE + + + +DVW+ GV ++ LS G P+ + + +G
Sbjct: 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 556
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 1e-16
Identities = 59/260 (22%), Positives = 100/260 (38%), Gaps = 59/260 (22%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
R L R+LG+G FG +L + A K++ K + +D +RE
Sbjct: 14 RRDIVLKRELGEGAFGKVFLAE--CYNLSPTKDKMLVAVKAL---KDPTLAARKDFQREA 68
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGEL-------------FDRIIQRGHY 197
+++ +L H++IV G D + +V E G+L R
Sbjct: 69 ELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 127
Query: 198 SERKAAELTRIIVGVVEACHSLGVM---HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254
E +++ I + L HRDL N LV + +K DFG+S
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRN-CLVG--ANLLVKIGDFGMS---- 180
Query: 255 PGQIFTDVVGSPYYV------------APEVLLKHYG---PEADVWTAGVILYILLS-GV 298
DV + YY PE ++ Y E+DVW+ GVIL+ + + G
Sbjct: 181 -----RDVYSTDYYRVGGHTMLPIRWMPPESIM--YRKFTTESDVWSFGVILWEIFTYGK 233
Query: 299 PPFWAETQQGIFDAVLKGHI 318
P++ + + + + +G +
Sbjct: 234 QPWFQLSNTEVIECITQGRV 253
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 1e-16
Identities = 55/252 (21%), Positives = 95/252 (37%), Gaps = 49/252 (19%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT--EIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
+ +G+G FG + ++ A K + ++ S++D D E++++
Sbjct: 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCK 81
Query: 156 LAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFD-------------RIIQRGHYSERKA 202
L H NI+ + GA E +++ +E G L D I S +
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 203 AELTRIIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF 259
+L V +HRDL N L+ +++ K DFGLS
Sbjct: 142 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS--------- 189
Query: 260 TDVVGSPYYV------------APEVLLKH-YGPEADVWTAGVILY-ILLSGVPPFWAET 305
G YV A E L Y +DVW+ GV+L+ I+ G P+ T
Sbjct: 190 ---RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246
Query: 306 QQGIFDAVLKGH 317
+++ + +G+
Sbjct: 247 CAELYEKLPQGY 258
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 2e-16
Identities = 58/256 (22%), Positives = 98/256 (38%), Gaps = 54/256 (21%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
R L +LG+G FG +L + A K++ K S +D +RE
Sbjct: 40 RRDIVLKWELGEGAFGKVFLA--ECHNLLPEQDKMLVAVKAL---KEASESARQDFQREA 94
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAA------- 203
+++ L H++IV G + + +V E G+L + G ++ A
Sbjct: 95 ELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 153
Query: 204 -----ELTRIIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255
+L + V L +HRDL N LV +K DFG+S
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRN-CLVG--QGLVVKIGDFGMS----- 205
Query: 256 GQIFTDVVGSPYYV------------APEVLLKH-YGPEADVWTAGVILYILLS-GVPPF 301
D+ + YY PE +L + E+DVW+ GV+L+ + + G P+
Sbjct: 206 ----RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 261
Query: 302 WAETQQGIFDAVLKGH 317
+ + D + +G
Sbjct: 262 YQLSNTEAIDCITQGR 277
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 3e-16
Identities = 58/239 (24%), Positives = 95/239 (39%), Gaps = 61/239 (25%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
R+ G+ LG G FG T A GI A K + ++ + E + E+
Sbjct: 44 RENLEFGKVLGSGAFGKVMNAT--AYGISKTGVSIQVAVKML--KEKADSSEREALMSEL 99
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGEL--FDRIIQRGHYSERKAAELTRI 208
++M L H+NIV + GA S ++++ E C G+L + R +R +SE + +
Sbjct: 100 KMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR-SKREKFSEDEIEYENQK 158
Query: 209 IVGVVEACHSL----------------------GVMHRDLKPENFLLVNKDDDFSLKAID 246
+ E + L +HRDL N L+ +K D
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV---THGKVVKICD 215
Query: 247 FGLSVFFKPGQIFTDVVGSPYYV------------APEVLLKH-YGPEADVWTAGVILY 292
FGL+ D++ YV APE L + Y ++DVW+ G++L+
Sbjct: 216 FGLA---------RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 4e-16
Identities = 63/308 (20%), Positives = 112/308 (36%), Gaps = 69/308 (22%)
Query: 63 DNSAPRISPSKKDNIMRRGIDNQTY----YVLGHKTDNI---RDLYTLGRKLGQGQFGTT 115
+++A ++ + ++ R N Y +L K ++ R+ R +G+G FG
Sbjct: 4 ESAAVTLTTLPSELLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRV 63
Query: 116 YLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGA 168
+ A G+ A K + ++ S + D +RE +M + NIV + G
Sbjct: 64 FQA--RAPGLLPYEPFTMVAVKML--KEEASADMQADFQREAALMAEF-DNPNIVKLLGV 118
Query: 169 YEDSLCVHIVMELCAGGEL---------------------FDRIIQRGHYSERKAAELTR 207
+ ++ E A G+L + AE
Sbjct: 119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLC 178
Query: 208 IIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264
I V +HRDL N L+ ++ +K DFGLS ++
Sbjct: 179 IARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLS---------RNIYS 226
Query: 265 SPYYV------------APEVLLKH-YGPEADVWTAGVILYILLS-GVPPFWAETQQGIF 310
+ YY PE + + Y E+DVW GV+L+ + S G+ P++ + +
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI 286
Query: 311 DAVLKGHI 318
V G+I
Sbjct: 287 YYVRDGNI 294
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 6e-16
Identities = 56/267 (20%), Positives = 99/267 (37%), Gaps = 66/267 (24%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
R LG+ LG+G+FG T A ++ A K + ++ S ++ D+ E
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKAT--AFHLKGRAGYTTVAVKML--KENASPSELRDLLSEF 77
Query: 151 QIMHHLAGHKNIVTIKGA--YEDSLCVHIVMELCAGGEL--------------------- 187
++ + H +++ + GA + L +++E G L
Sbjct: 78 NVLKQV-NHPHVIKLYGACSQDGPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 188 FDRIIQRGHYSERKAAELTRIIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKA 244
+ +L + + + ++HRDL N L+ + +K
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV---AEGRKMKI 191
Query: 245 IDFGLSVFFKPGQIFTDVVGSPYYV------------APEVLLKH-YGPEADVWTAGVIL 291
DFGLS DV YV A E L H Y ++DVW+ GV+L
Sbjct: 192 SDFGLS---------RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 292 Y-ILLSGVPPFWAETQQGIFDAVLKGH 317
+ I+ G P+ + +F+ + GH
Sbjct: 243 WEIVTLGGNPYPGIPPERLFNLLKTGH 269
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 8e-16
Identities = 49/257 (19%), Positives = 92/257 (35%), Gaps = 54/257 (21%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
+LG+ +FG Y G A K++ + E+ R E
Sbjct: 8 LSAVRFMEELGEDRFGKVYKGH--LFGPAPGEQTQAVAIKTL--KDKAEGPLREEFRHEA 63
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGEL-------------FDRIIQRGHY 197
+ L H N+V + G + ++ C+ G+L R
Sbjct: 64 MLRARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 198 SERKAAELTRIIVGVVEACH---SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254
S + + ++ + S V+H+DL N +LV D ++K D GL
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN-VLVY--DKLNVKISDLGLF---- 175
Query: 255 PGQIFTDVVGSPYYV------------APEVLL-KHYGPEADVWTAGVILYILLS-GVPP 300
+V + YY APE ++ + ++D+W+ GV+L+ + S G+ P
Sbjct: 176 -----REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
Query: 301 FWAETQQGIFDAVLKGH 317
+ + Q + + +
Sbjct: 231 YCGYSNQDVVEMIRNRQ 247
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 2e-14
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
++EE+ F+++ D S I+ K + S L E+ + + +D D G +
Sbjct: 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGAL 73
Query: 459 DYGEFIAATVHL 470
EF AA HL
Sbjct: 74 TLPEFCAA-FHL 84
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 8e-10
Identities = 13/57 (22%), Positives = 21/57 (36%)
Query: 481 AAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
F+ D S +I+ + + ++ L I D D DG + EF A
Sbjct: 26 NQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAF 82
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 5e-14
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
+S E A E+F D D G ++ E++ + + L T + + D + G +
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK--TGLPSTLLAHIWSLCDTKDCGKL 61
Query: 459 DYGEFIAATVHL 470
+F A HL
Sbjct: 62 SKDQFALA-FHL 72
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-10
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 483 FQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
F DKD G+++ E+++ + + LL I D + G++ +F
Sbjct: 16 FLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAF 70
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 7e-14
Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGT 457
+++E+ FK + D +G I K + L E+ + + +D D G
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGA 59
Query: 458 IDYGEFIAATVHLNKLEREEH 478
+ EF AA HL + +
Sbjct: 60 LTLDEFCAA-FHLVVARKNGY 79
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-11
Identities = 13/58 (22%), Positives = 22/58 (37%)
Query: 481 AAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
F+ D +G+I ++ + + + L I D D DG + EF A
Sbjct: 13 NQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFH 70
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 2e-13
Identities = 35/190 (18%), Positives = 71/190 (37%), Gaps = 37/190 (19%)
Query: 94 TDNIRDLYTLGRKLGQGQFGTTYLC-----TEIATGIEFACKSISKRKLISREDVEDVRR 148
TD + +G +GQG FG YL + + K + D +
Sbjct: 30 TDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVK-------VEPSDNGPLFT 82
Query: 149 EIQIMHHLAGHKNIVTIK----------------GAYEDSLCVH--IVMELCAG---GEL 187
E++ A + I G ++ + + ++M+ G ++
Sbjct: 83 ELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKI 141
Query: 188 FDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247
++ +S + +L+ I+ ++E H +H D+K N LL K+ D + +D+
Sbjct: 142 YEA--NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD-QVYLVDY 198
Query: 248 GLSVFFKPGQ 257
GL+ + P
Sbjct: 199 GLAYRYCPEG 208
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 3e-13
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGT 457
++ + +++F + D SG +T + + L + S+L ++ + + +D+D G
Sbjct: 7 AVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIWNLSDIDQDGK 64
Query: 458 IDYGEFIAATVHL 470
+ EFI A HL
Sbjct: 65 LTAEEFILAM-HL 76
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 7e-11
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 483 FQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
F DK SG++T + + + ++ L I D D DG++ EF+ M
Sbjct: 20 FNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAM 74
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 3e-13
Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 21/181 (11%)
Query: 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGI--------EFACKSISKRKLISREDVED 145
TD + L + G Y +T +F+ K +K + E
Sbjct: 37 TDKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFF 96
Query: 146 VRR----EIQIMHHLAG--HKNIVTIK--GAYEDSLCVHIVMELCAGGELFD--RIIQRG 195
R ++ L I T G ++D +V+ G L + +
Sbjct: 97 QRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRF-LVLPSL-GRSLQSALDVSPKH 154
Query: 196 HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255
SER ++ ++ +E H +H ++ EN + + +D + +G + + P
Sbjct: 155 VLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV-DPEDQSQVTLAGYGFAFRYCP 213
Query: 256 G 256
Sbjct: 214 S 214
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 66.9 bits (163), Expect = 4e-13
Identities = 23/146 (15%), Positives = 46/146 (31%), Gaps = 21/146 (14%)
Query: 406 GLKEMFKAMDT---DNSGAITFDELKAGLRRYGSTLKDTE------IRDLMDAADVDNSG 456
G + I +L+ L + T + R L+ ++ +G
Sbjct: 2 GSSHHHHHHSSGLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNG 61
Query: 457 TIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQA--CAEHNMTDVLLE 514
+D EF +R H FQ G + +L +A + +
Sbjct: 62 RLDQEEFARL------WKRLVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISR 114
Query: 515 DIIREVDQ---DNDGRIDYGEFVAMM 537
+++ V D+ GR+ + V +
Sbjct: 115 ELLHLVTLRYSDSVGRVSFPSLVCFL 140
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 8e-11
Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTL---KDTEIRDLMDAADVDNSGTIDYGEF 463
+ +F+ + + G + +L + E+ L+ D+ G + +
Sbjct: 78 YQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYSDSVGRVSFPSL 136
Query: 464 IAATVHLNKLEREEHLVAAFQYFDKDGSG-YITVDE 498
+ + L E + F+ KDG G Y+T E
Sbjct: 137 VCFLMRL------EAMAKTFRNLSKDGKGLYLTEME 166
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.6 bits (164), Expect = 7e-12
Identities = 80/584 (13%), Positives = 158/584 (27%), Gaps = 218/584 (37%)
Query: 38 SDYSTPSLNSQQLVSQEFSKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNI 97
++ PS+ ++ + Q ++ DN K N+ R +
Sbjct: 100 TEQRQPSMMTRMYIEQ---RDRLYNDNQ-----VFAKYNVSRL-----------QPYLKL 140
Query: 98 RD-LYTL--GRKL---GQGQFGTTYLCTEIATGIEFACKSISKRKLISRE----DVEDVR 147
R L L + + G G T++ + C S + + + ++++
Sbjct: 141 RQALLELRPAKNVLIDGVLGSGKTWVALD-------VCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 148 REIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTR 207
++ L L I + + I R H + AEL R
Sbjct: 194 SPETVLEMLQ--------------KLLYQIDPNWTSRSDHSSNIKLRIHSIQ---AELRR 236
Query: 208 IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPY 267
++ + + N LLV +
Sbjct: 237 LL------------KSKPYE--NCLLV----------LL--------------------- 251
Query: 268 YVAPEVLLKHYGPEADVWTAGVILY------ILLSGVPPFWAETQ-QGIFDAV---LKGH 317
+V A ILL+ T+ + + D + H
Sbjct: 252 ---------------NVQNAKAWNAFNLSCKILLT--------TRFKQVTDFLSAATTTH 288
Query: 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL-CHPWICENGVAPDRSLDPAVL- 375
I + L D K L+ K L + L EVL +P S+ +
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYL-DCRPQDL-PREVLTTNPRRL--------SIIAESIR 338
Query: 376 ---SRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDE---LKA 429
+ + +N K +I SL+ E A ++MF + ++ F +
Sbjct: 339 DGLATWDNWKHVNCDKLT--TIIESSLNVLEPAEYRKMFDRL------SV-FPPSAHIPT 389
Query: 430 G-LRRYGSTLKDTEIRDLMD------AADVDN-SGTID-YGEFIAATVHLNKLEREEH-- 478
L + +++ +++ + TI ++ V L E H
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN-EYALHRS 448
Query: 479 LVAAFQ---YFDKDG------SGYI---------------TVDE----------LQQ--- 501
+V + FD D Y + L+Q
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIR 508
Query: 502 -----ACAEHNMTDVLL-----EDIIREVDQDNDGRI-DYGEFV 534
A ++ + L + I + D + + +F+
Sbjct: 509 HDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFL 552
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 2e-06
Identities = 59/440 (13%), Positives = 123/440 (27%), Gaps = 119/440 (27%)
Query: 149 EIQIMHHLAGHKNIVTI--KGAYEDSLCVHI--VMELCAGGELFDRIIQRGHYSERKAAE 204
E + +K+I+++ ++ C + + + E D II
Sbjct: 10 ETGEHQY--QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG---- 63
Query: 205 LTRIIVGVVEACHSLGV---MHRDLKPE-NFL---LVNKDDDFSLKAIDF--GLSVFFKP 255
T + + + V + L+ FL + + S+ + +
Sbjct: 64 -TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 256 GQIFTDVVGSPYYV--APEVL-----LKHYGPEADVWTAGVILYILLSGVPPF---W--A 303
Q+F + Y V L L P V++ GV W
Sbjct: 123 NQVF-----AKYNVSRLQPYLKLRQALLELRPAK-----NVLID----GVLGSGKTWVAL 168
Query: 304 ETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363
+ ++ +DF+ W ++ ++ C+ P L + L +
Sbjct: 169 DVCL---SYKVQCKMDFKIF-W--LN------LKN--CNSPETVLEMLQKLLYQIDPNWT 214
Query: 364 VAPDRSLDPAVLSRLKQFSAMNKLKK-MALRVIAESLSEEEIAGL-------KEMFKAMD 415
D S + +L+ S +L++ + + L L + + A +
Sbjct: 215 SRSDHSSNI----KLRIHSIQAELRRLLKSKPYENCL-------LVLLNVQNAKAWNAFN 263
Query: 416 TDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475
+ L T + + D + I L E
Sbjct: 264 L-------------SCK----ILLTTRFKQVTDFLSAATTTHISLDHHSMT---LTPDEV 303
Query: 476 EEHLVAAFQYFDKDGSGYITVDEL-QQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFV 534
+ L+ +Y D +L ++ + II E +D D + V
Sbjct: 304 KS-LLL--KYLD------CRPQDLPREVLTTNP----RRLSIIAESIRDGLATWDNWKHV 350
Query: 535 AMMQKGNVGLGRRTMRNSLN 554
+ + +SLN
Sbjct: 351 NCDKL------TTIIESSLN 364
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 6e-11
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGT 457
+++ EE A + F ++ SG IT D+ + + S L + + AD++N G
Sbjct: 26 AITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ--SGLPQPVLAQIWALADMNNDGR 82
Query: 458 IDYGEFIAATVHL 470
+D EF A + L
Sbjct: 83 MDQVEFSIA-MKL 94
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 1e-06
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 484 QYFDK--DGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
Q F SG+IT D+ + + + +L I D +NDGR+D EF M+
Sbjct: 37 QQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMK 93
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 9e-11
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 86 TYYVLGHKTDNIRD--LYTLGRKLGQGQFGTTY---LCTEIATGIEFACKSISKRKLISR 140
++Y L + T+N + + G K+G+G FG Y + A K KL +
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----NNTTVAVK-----KLAAM 65
Query: 141 EDVEDV------RREIQIMHHLAGHKNIVTIKG--AYEDSLCVHIVMELCAGGELFDRII 192
D+ +EI++M H+N+V + G + D LC +V G L DR+
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQ-HENLVELLGFSSDGDDLC--LVYVYMPNGSLLDRL- 121
Query: 193 QRGHYSERKAAEL---TR--IIVGV---VEACHSLGVMHRDLKPENFLLVNKDDDFSLKA 244
L R I G + H +HRD+K N LL D+ F+ K
Sbjct: 122 ----SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKI 174
Query: 245 IDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPF 301
DFGL+ + + + +VG+ Y+APE L P++D+++ GV+L +++G+P
Sbjct: 175 SDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAV 234
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 63.4 bits (153), Expect = 1e-10
Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 14/171 (8%)
Query: 375 LSRLKQFSA--MNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLR 432
+L A +N+++ L A+ +S+E++ + F D +G + ++ +A L
Sbjct: 693 WEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLI 752
Query: 433 RYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK-LEREEHLVAAFQYFDKDGS 491
G + + E +M D + G + + FI + + ++A+F+
Sbjct: 753 SMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILA-GDK 811
Query: 492 GYITVDELQQACAEHNMTDVLLEDIIREVDQDND-----GRIDYGEFVAMM 537
YITVDEL+ + E I + N G +DY F +
Sbjct: 812 NYITVDELR-----RELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTAL 857
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 44.9 bits (105), Expect = 6e-05
Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYG 531
E+ A+F +FD+ +G + ++ + +NM + I+ VD + G + +
Sbjct: 722 EQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQ 781
Query: 532 EFVAMMQK 539
F+ M +
Sbjct: 782 AFIDFMSR 789
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 1e-10
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDN 454
++ + ++ ++ ++ N+G + + A L++ S L D + + D AD D
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK--SGLPDLILGKIWDLADTDG 58
Query: 455 SGTIDYGEFIAA 466
G + EF A
Sbjct: 59 KGVLSKQEFFVA 70
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 2e-08
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 468 VHLNKLEREEHL-VAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDG 526
+ L +L + ++ + +G + + + + D++L I D D G
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKG 60
Query: 527 RIDYGEFVAMMQ 538
+ EF ++
Sbjct: 61 VLSKQEFFVALR 72
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 3e-10
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF-------ACKSISKRKLISREDVEDVRREI 150
RD LG+ LG+G FG A GI+ A K + ++ + + + E+
Sbjct: 21 RDRLKLGKPLGRGAFGQVIEAD--AFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL 76
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLC-VHIVMELCAGGELFD 189
+I+ H+ H N+V + GA + +++E C G L
Sbjct: 77 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 116
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 26/97 (26%)
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV-------- 269
S +HRDL N LL + +K DFGL+ D+ P YV
Sbjct: 211 SRKCIHRDLAARNILL---SEKNVVKICDFGLA---------RDIYKDPDYVRKGDARLP 258
Query: 270 ----APEVLLKH-YGPEADVWTAGVILY-ILLSGVPP 300
APE + Y ++DVW+ GV+L+ I G P
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 6e-10
Identities = 61/268 (22%), Positives = 105/268 (39%), Gaps = 47/268 (17%)
Query: 86 TYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED 145
L T+N +G G FG Y + G + A K +R S + +E+
Sbjct: 30 PLVDLEEATNNFDH----KFLIGHGVFGKVYKGV-LRDGAKVALK---RRTPESSQGIEE 81
Query: 146 VRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAEL 205
EI+ + H ++V++ G ++ + ++ + G L + + S+ +
Sbjct: 82 FETEIETLSFCR-HPHLVSLIGFCDERNEMILIYKYMENGNLKRHL----YGSDLPTMSM 136
Query: 206 T-----RIIVGV---VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257
+ I +G + H+ ++HRD+K N LL D++F K DFG+S
Sbjct: 137 SWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELD 193
Query: 258 ---IFTDVVGSPYYVAPEVLLKHYGPE-ADVWTAGVILYILLSGVPPF------------ 301
+ T V G+ Y+ PE +K E +DV++ GV+L+ +L
Sbjct: 194 QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253
Query: 302 -WAETQQ------GIFDAVLKGHIDFES 322
WA I D L I ES
Sbjct: 254 EWAVESHNNGQLEQIVDPNLADKIRPES 281
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 8e-10
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 37/216 (17%)
Query: 106 KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTI 165
LG+G FG Y +A G A K + K + +++ + E++++ H+N++ +
Sbjct: 37 ILGRGGFGKVYKGR-LADGTLVAVKRL-KEERTQGGELQ-FQTEVEMISMAV-HRNLLRL 92
Query: 166 KGAYEDSLCVH-----IVMELCAGGELFDRIIQRGHYSERKAAELT-----RIIVGVV-- 213
+G C+ +V A G + + L RI +G
Sbjct: 93 RG-----FCMTPTERLLVYPYMANGSVASCL----RERPESQPPLDWPKRQRIALGSARG 143
Query: 214 -----EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ--IFTDVVGSP 266
+ C ++HRD+K N LL D++F DFGL+ + T V G+
Sbjct: 144 LAYLHDHCD-PKIIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 199
Query: 267 YYVAPEVLLKHYGPE-ADVWTAGVILYILLSGVPPF 301
++APE L E DV+ GV+L L++G F
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 59.4 bits (143), Expect = 2e-09
Identities = 38/181 (20%), Positives = 72/181 (39%), Gaps = 19/181 (10%)
Query: 367 DRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDE 426
L +VL +L + M I + SEEE +++F + + ++ E
Sbjct: 694 ISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEE-RQFRKLFVQLA-GDDMEVSATE 751
Query: 427 LKAGLRRYGSTLKDTEI--------RDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEH 478
L L + + D + R ++ D D +G + + EF ++ K +
Sbjct: 752 LMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQG--- 808
Query: 479 LVAAFQYFDKDGSGYITVDELQQA--CAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAM 536
++ F+ D SG I +EL A A ++ + IIR D G +D+ F++
Sbjct: 809 ---IYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNFISC 864
Query: 537 M 537
+
Sbjct: 865 L 865
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 55.9 bits (134), Expect = 2e-08
Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Query: 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEF 463
I +F+ D D SG+++ E++ + G L ++ ++ A D+ ID+ F
Sbjct: 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKL-PCQLHQVIVARFADDELIIDFDNF 664
Query: 464 IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVD-ELQQACAEHNMTDVLLEDIIREVDQ 522
+ V L E L F+ D + +G I +D + + +E
Sbjct: 665 VRCLVRL------EILFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMH 718
Query: 523 DNDGRIDYGE 532
++ + E
Sbjct: 719 YSNIEANESE 728
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 4e-08
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEF 463
I + ++K +TD SG I +EL G L I ++ D +G +D+ F
Sbjct: 803 IKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQ-HIYSMIIRRYSDETGNMDFDNF 861
Query: 464 IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
I+ V L+ + R AF+ DK+G+G I V+ +
Sbjct: 862 ISCLVRLDAMFR------AFRSLDKNGTGQIQVNIQE 892
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 3e-09
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEF 463
I +++++ +D D SG + E++ L G L ++ ++ A D+ ID+ F
Sbjct: 604 IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNF 662
Query: 464 IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
+ V L L + F+ D + +G I +D +
Sbjct: 663 VRCLVRLEILFK------IFKQLDPENTGTIQLDLIS 693
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 5e-07
Identities = 32/148 (21%), Positives = 63/148 (42%), Gaps = 18/148 (12%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE--------IRDLMDAAD 451
E+ G + +F + +++ I+ EL+ LRR + +D + + ++D D
Sbjct: 527 EEDIGDGFRRLFAQLAGEDA-EISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLD 585
Query: 452 VDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQA--CAEHNMT 509
D SG + EF + K + ++ D D SG + E+++A A +
Sbjct: 586 EDGSGKLGLKEFYILWTKIQKYQ------KIYREIDVDRSGTMNSYEMRKALEEAGFKLP 639
Query: 510 DVLLEDIIREVDQDNDGRIDYGEFVAMM 537
L + I+ D++ ID+ FV +
Sbjct: 640 CQLHQVIVARFA-DDELIIDFDNFVRCL 666
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 58.4 bits (140), Expect = 3e-09
Identities = 19/138 (13%), Positives = 42/138 (30%), Gaps = 10/138 (7%)
Query: 398 SLSEEEIAG--LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNS 455
S+ + + + + D + + F ELK L+ + D R + D +
Sbjct: 2 SMDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQT 61
Query: 456 GTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACA----EHNMTDV 511
+++ E L + + AF+ ++V+ L E
Sbjct: 62 DSLEDEEIETF---YKMLTQRAEIDRAFEEAAGSAE-TLSVERLVTFLQHQQREEEAGPA 117
Query: 512 LLEDIIREVDQDNDGRID 529
L +I + +
Sbjct: 118 LALSLIERYEPSETAKAQ 135
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 45.3 bits (106), Expect = 4e-05
Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 470 LNKLEREEH-LVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDG 526
+++ ++ +H + + + DK+ + EL+ E N + D I RE D
Sbjct: 3 MDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTD 62
Query: 527 RIDYGEFVAMMQK 539
++ E +
Sbjct: 63 SLEDEEIETFYKM 75
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 1e-08
Identities = 43/249 (17%), Positives = 76/249 (30%), Gaps = 68/249 (27%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE-----DVEDVRREIQI 152
+ K+G+G FG + IA A K I+ E++ EI I
Sbjct: 19 TEKLQRCEKIGEGVFGEVFQT--IADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76
Query: 153 MHHLAGH--------------KNIVTIKGAYEDSLC------------------------ 174
L+ ++ ++G+Y L
Sbjct: 77 SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136
Query: 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV 234
+ IV+E GG +++ + + L ++ + A SL HRDL N LL
Sbjct: 137 LFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLK 196
Query: 235 N---------------KDDDFSLKA--IDFGLSVFFKPGQ-IFTDVVGSPYYVAPEVLLK 276
L+ ID+ LS + G +F D + ++
Sbjct: 197 KTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCD-----VSMDEDLFTG 251
Query: 277 HYGPEADVW 285
+ D++
Sbjct: 252 DGDYQFDIY 260
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-08
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 473 LERE-EHLVAAFQ-YFDKDG-SGYITVDELQQACAEHNMTDVL-----LEDIIREVDQDN 524
++ L + F+ Y K+G ++ +EL+Q + +L L+D+ +E+D++
Sbjct: 2 AQKSPAELKSIFEKYAAKEGDPNQLSKEELKQL-IQAEFPSLLKGPRTLDDLFQELDKNG 60
Query: 525 DGRIDYGEFVAMMQK 539
DG + + EF +++K
Sbjct: 61 DGEVSFEEFQVLVKK 75
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-05
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 401 EEEIAGLKEMFK--AMDTDNSGAITFDELKAGLRR-YGSTLKDTEIRD-LMDAADVDNSG 456
++ A LK +F+ A + ++ +ELK ++ + S LK D L D + G
Sbjct: 3 QKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDG 62
Query: 457 TIDYGEFIAATVHLNK 472
+ + EF +++
Sbjct: 63 EVSFEEFQVLVKKISQ 78
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 5e-08
Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGT 457
++ E+ A +F ++ +G ++ D++K L S L + + + +D+D+ G
Sbjct: 8 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGM 64
Query: 458 IDYGEFIAATVHLNKLEREEH 478
+D EF + L E+
Sbjct: 65 LDRDEFA-VAMFLVYCALEKE 84
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 4e-07
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 484 QYFDK--DGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
FD +G+++ D+++ + +L + D D+DG +D EF M
Sbjct: 19 AIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 74
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 1e-07
Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 14/169 (8%)
Query: 382 SAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT 441
SA LK L+ + + + A +++ F + D G + + GS
Sbjct: 7 SAAVALK--GLQFVTAKVGNDGWAAVEKRFNQLQVD--GVLLRSRFGKCIGMDGSDEFAV 62
Query: 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQ 501
++ D + + E L + L F DK+ G +T +E+++
Sbjct: 63 QMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKE 122
Query: 502 ---ACAEHNMTDVLLED-------IIREVDQDNDGRIDYGEFVAMMQKG 540
A N + E I+ E+D N G I+ + A++ +
Sbjct: 123 IIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQS 171
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 9e-07
Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 472 KLERE-EHLVAAFQYFDKDGSGYITVDELQQ-------ACAEHNMTDVLLEDIIREVDQD 523
++E E ++ F F D GY+T ++L+ E+ + ++ I++++DQ
Sbjct: 3 QMEHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQC 61
Query: 524 NDGRIDYGEFVAMMQK 539
DG++ + F +++
Sbjct: 62 RDGKVGFQSFFSLIAG 77
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 1e-06
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQACAE---HNMTDVLLEDIIREVDQDND 525
+LE+ ++ + Y G + D+L++ + + +E+D + D
Sbjct: 4 ELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTD 63
Query: 526 GRIDYGEFVAMMQK 539
G +++ EF+ ++ K
Sbjct: 64 GAVNFQEFLILVIK 77
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 6e-05
Identities = 14/92 (15%), Positives = 37/92 (40%), Gaps = 11/92 (11%)
Query: 401 EEEIAGLKEMFK--AMDTDNSGAITFDELKAGLRR-YGSTLKDTEIRDLMDAADVDNSGT 457
E+ + + +++ ++ N A+ D+LK L ++ D++ G
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGA 65
Query: 458 IDYGEFIAATVHLNKLEREEHLVAAFQYFDKD 489
+++ EF+ + + VAA + ++
Sbjct: 66 VNFQEFLILVIKM--------GVAAHKKSHEE 89
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 3e-06
Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQ-------ACAEHNMTDVLLEDIIREVD 521
LE+ + +V+ F Y K+G + EL++ + + + ++ +D
Sbjct: 4 PLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLD 63
Query: 522 QDNDGRIDYGEFVAMMQK 539
+ D +D+ E+ +
Sbjct: 64 SNRDNEVDFQEYCVFLSC 81
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 37.9 bits (88), Expect = 9e-04
Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 7/80 (8%)
Query: 398 SLSEEEIAGLKEMFK--AMDTDNSGAITFDELKAGLRR-----YGSTLKDTEIRDLMDAA 450
E+ + + F + + + ELK L R G + + LM
Sbjct: 3 CPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNL 62
Query: 451 DVDNSGTIDYGEFIAATVHL 470
D + +D+ E+ +
Sbjct: 63 DSNRDNEVDFQEYCVFLSCI 82
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 3e-06
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQA-------CAEHNMTDVLLEDIIREVD 521
LE+ + +V+ F Y K+G + EL++ + + ++ +D
Sbjct: 7 PLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLD 66
Query: 522 QDNDGRIDYGEFVAMMQK 539
+ D +D+ E+ +
Sbjct: 67 SNRDNEVDFQEYCVFLSS 84
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 38.3 bits (89), Expect = 7e-04
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 7/80 (8%)
Query: 398 SLSEEEIAGLKEMFK--AMDTDNSGAITFDELKAGLRR-----YGSTLKDTEIRDLMDAA 450
S E+ + + F + + + ELK L R G + + LM
Sbjct: 6 SPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNL 65
Query: 451 DVDNSGTIDYGEFIAATVHL 470
D + +D+ E+ +
Sbjct: 66 DSNRDNEVDFQEYCVFLSSI 85
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 5e-06
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 18/75 (24%)
Query: 483 FQYFDKDGSGYITVDELQQACAEH------------------NMTDVLLEDIIREVDQDN 524
F D + G + EL+ + + E +++ VD +
Sbjct: 26 FILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQ 85
Query: 525 DGRIDYGEFVAMMQK 539
D + EF+A Q+
Sbjct: 86 DRLVTLEEFLASTQR 100
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 5e-06
Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQ-------ACAEHNMTDVLLEDIIREVD 521
LE+ + +V+ F Y K+G + EL++ + + + ++ +D
Sbjct: 16 PLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLD 75
Query: 522 QDNDGRIDYGEFVAMMQK 539
+ D +D+ E+ +
Sbjct: 76 SNRDNEVDFQEYCVFLSC 93
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 39.1 bits (91), Expect = 4e-04
Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 13/96 (13%)
Query: 382 SAMNKLKKMALRVIAESLSEEEIAGLKEMFK--AMDTDNSGAITFDELKAGLRR-----Y 434
+ MA E+ + + F + + + ELK L R
Sbjct: 5 HHHHHHGSMA------CPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFL 58
Query: 435 GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470
G + + LM D + +D+ E+ +
Sbjct: 59 GKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Length = 106 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 8e-06
Identities = 17/83 (20%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 464 IAATVHLNKLERE-EHLVAAFQ-YFDKDGS-GYITVDELQ---QACAEHNMTDV-LLEDI 516
+ A L +LE E +V F + ++G ++V+E + H + DV L++
Sbjct: 8 LMAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEK 67
Query: 517 IREVDQDNDGRIDYGEFVAMMQK 539
++ +D + D + + E+ ++ +
Sbjct: 68 MKSLDVNQDSELKFNEYWRLIGE 90
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Length = 139 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 1e-05
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTID 459
++ E+F + +G IT K + + S L +T + + ADVD G +D
Sbjct: 46 VGKDKPTYDEIFYTLS-PVNGKITGANAKKEMVK--SKLPNTVLGKIWKLADVDKDGLLD 102
Query: 460 YGEFI 464
EF
Sbjct: 103 DEEFA 107
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Length = 139 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 8e-05
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 484 QYFDK--DGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
+ F +G IT ++ + + + +L I + D D DG +D EF
Sbjct: 55 EIFYTLSPVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALAN 110
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Length = 101 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-05
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQ-------ACAEHNMTDVLLEDIIREVD 521
LE+ +V FQ Y + G + EL++ + + +D
Sbjct: 4 PLEQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLD 63
Query: 522 QDNDGRIDYGEFVAMMQK 539
+ D +D+ E+V +
Sbjct: 64 TNKDCEVDFVEYVRSLAC 81
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-05
Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQ-------ACAEHNMTDVLLEDIIREVD 521
KLE E +V F Y + G ++ EL+Q ++ ++++I + +D
Sbjct: 6 KLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLD 65
Query: 522 QDNDGRIDYGEFVAMMQK 539
+ D ++D+ EF++++
Sbjct: 66 ANQDEQVDFQEFISLVAI 83
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-05
Identities = 15/75 (20%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQA----CAEHNMTDVLLEDIIREVDQDN 524
LE+ +V F Y ++G ++ EL++ M + ++D+++ +D+++
Sbjct: 4 PLEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNS 63
Query: 525 DGRIDYGEFVAMMQK 539
D ID+ E+ +
Sbjct: 64 DQEIDFKEYSVFLTM 78
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 4e-05
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQ-------ACAEHNMTDVLLEDIIREVD 521
+LE E L+ F + K+G ++ EL+ + + ++ I++E+D
Sbjct: 3 ELETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELD 62
Query: 522 QDNDGRIDYGEFVAMMQK 539
++ DG +D+ EFV ++
Sbjct: 63 ENGDGEVDFQEFVVLVAA 80
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 7e-05
Identities = 14/76 (18%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQA-----CAEHNMTDVLLEDIIREVDQD 523
L++ LVA F Y ++G ++ EL++ + D + ++ ++D++
Sbjct: 4 PLDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRN 63
Query: 524 NDGRIDYGEFVAMMQK 539
D +++ E+V +
Sbjct: 64 KDQEVNFQEYVTFLGA 79
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 8e-05
Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG--SGYITVDELQQACAEHNMTDVL--------LEDIIRE 519
+LE+ LV F Y K I+ ++ + + +L + +I+
Sbjct: 5 ELEKAVIVLVENFYKYVSKYSLVKNKISKSSFREM-LQKELNHMLSDTGNRKAADKLIQN 63
Query: 520 VDQDNDGRIDYGEFVAMMQK 539
+D ++DGRI + E+ ++
Sbjct: 64 LDANHDGRISFDEYWTLIGG 83
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* Length = 113 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 1e-04
Identities = 18/84 (21%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 467 TVHLNKLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQA--------CAEHNMTDVLLED 515
T +++LER E ++ F Y K G + E ++ + N + ++E
Sbjct: 1 TSKMSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEH 60
Query: 516 IIREVDQDNDGRIDYGEFVAMMQK 539
I+ ++D + D ++ + EF+ +M +
Sbjct: 61 IMEDLDTNADKQLSFEEFIMLMAR 84
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 1e-04
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQ-------ACAEHNMTDVLLEDIIREVD 521
+LE+ L+ F Y ++G + EL++ E +++ ++ +D
Sbjct: 3 ELEKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLD 62
Query: 522 QDNDGRIDYGEFVAMMQK 539
+ DG D+ EF+A +
Sbjct: 63 SNGDGECDFQEFMAFVAM 80
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 1e-04
Identities = 13/78 (16%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQ-------ACAEHNMTDVLLEDIIREVD 521
+LE ++ F Y +G + +T EL+ + ++ +++++D
Sbjct: 3 ELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLD 62
Query: 522 QDNDGRIDYGEFVAMMQK 539
+ D ++D+ EF+ +
Sbjct: 63 ANGDAQVDFSEFIVFVAA 80
|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Length = 99 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQA-------CAEHNMTDVLLEDIIREVD 521
+ ER E L+A FQ + +DG + I+ E ++ +L+ +++++D
Sbjct: 7 ETERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLD 66
Query: 522 QDNDGRIDYGEFVAMMQK 539
D+DG++D+ EF+ ++
Sbjct: 67 LDSDGQLDFQEFLNLIGG 84
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Length = 99 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 3e-04
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQ-------ACAEHNMTDVLLEDIIREVD 521
KLE + L+ F Y +G ++ EL++ +L+E I+ ++D
Sbjct: 4 KLEGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLD 63
Query: 522 QDNDGRIDYGEFVAMMQK 539
+ D +D+ EFV ++
Sbjct: 64 SNKDNEVDFNEFVVLVAA 81
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 564 | |||
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.94 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.92 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.92 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.91 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.91 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.91 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.9 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.9 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.9 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.89 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.89 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.89 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.89 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.89 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.89 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.89 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.88 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.87 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.87 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.87 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.87 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.87 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.87 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.87 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.87 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.87 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.87 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.87 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.87 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.87 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.86 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.86 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.86 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.86 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.86 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.86 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.85 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.85 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 99.85 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.85 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.84 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.84 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.84 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.84 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.84 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.84 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.84 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.83 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.83 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.83 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.83 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.83 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 99.83 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.82 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.82 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.82 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.82 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.82 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.82 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.82 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 99.81 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.8 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.8 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.8 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.8 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.8 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.8 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.8 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.79 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.79 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 99.78 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.78 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.78 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.77 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.77 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.77 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.77 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.77 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 99.77 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 99.76 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.76 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.75 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.74 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.74 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.73 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.72 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.71 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.71 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.69 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.66 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.64 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.61 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.61 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.61 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.61 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.61 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.61 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.6 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.6 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.6 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.6 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.6 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.59 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.59 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.58 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.58 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.57 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.57 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.57 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.57 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 99.56 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.56 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.55 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.55 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.55 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.54 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.54 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.54 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.54 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.54 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.54 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.54 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.54 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.54 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.53 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.53 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.53 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.53 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.53 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.53 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.52 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.52 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.52 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.51 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.5 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.5 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.5 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.5 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.5 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.49 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.49 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.49 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.49 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.48 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.48 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.48 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.48 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.47 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.47 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.46 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 99.45 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.45 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.45 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.45 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.45 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.45 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.44 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.43 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.43 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.43 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.42 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.41 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.41 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.41 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.4 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 99.4 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.4 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.39 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.39 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.39 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.38 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 99.38 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.38 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.38 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.37 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.35 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.35 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.34 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.34 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 99.33 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.32 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.31 | |
| 1eg3_A | 261 | Dystrophin; EF-hand like domain, WW domain, struct | 99.3 | |
| 2kld_A | 123 | Polycystin-2; PC2, PKD2, calcium binding domain, E | 99.3 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 99.29 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.27 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.27 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.27 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.26 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.26 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 99.25 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 99.24 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.23 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.23 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.23 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.22 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.2 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.19 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 99.19 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.17 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.16 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.16 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.16 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.15 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 99.15 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.15 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.14 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.13 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.12 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.12 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.12 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.12 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.11 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.11 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 99.1 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.1 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.1 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.1 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.09 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.09 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 99.09 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.09 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.08 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.07 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 99.07 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.06 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.06 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.06 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.05 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.05 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.05 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.05 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.05 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.05 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.05 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 99.05 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.05 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 99.05 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 99.04 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 99.04 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 99.04 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 99.03 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.03 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.03 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.02 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 99.02 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 99.01 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 99.01 |
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-78 Score=642.18 Aligned_cols=448 Identities=39% Similarity=0.637 Sum_probs=402.5
Q ss_pred ccccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 92 HKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 92 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..+..+.++|++.+.||+|+||.||+|.+..+++.||||++.+.........+.+.+|+.+++++. ||||+++++++.+
T Consensus 19 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~ 97 (484)
T 3nyv_A 19 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFED 97 (484)
T ss_dssp CCCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCC-CTTBCCEEEEEEC
T ss_pred cCCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCC-CCCCCcEEEEEEe
Confidence 345567788999999999999999999999999999999997765544556778999999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
...+|+|||||.+++|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||+...+.++.+||+|||++.
T Consensus 98 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 98 KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp SSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 99999999999999999999988899999999999999999999999999999999999999655567899999999998
Q ss_pred ccCCCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
...........+||+.|+|||++.+.|+.++|||||||++|+|++|.+||.+.+..+++..+.++...+..+.+..+|++
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 257 (484)
T 3nyv_A 178 HFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257 (484)
T ss_dssp HBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHH
T ss_pred EcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHH
Confidence 87766666678899999999999999999999999999999999999999999999999999999888877777889999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC---CCCCCCCHHHHHHHHhhhhhhHHHHHHHHHhhhhh-hHHHHHhH
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICENGV---APDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESL-SEEEIAGL 407 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~---~~~~~~~~~~~~~~k~~~~~n~~~~~~~~~~~~~~-~~~~~~~l 407 (564)
+++||.+||.+||.+|||+.++|+||||+.... ....+.....+..+++|...+++++..+..+...+ +++++.++
T Consensus 258 ~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l 337 (484)
T 3nyv_A 258 AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKEL 337 (484)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHH
Confidence 999999999999999999999999999986433 22334456778889999999999999998888776 78899999
Q ss_pred hhhhhcccCCCCCCCCHHHHHH----HHHhhCCCCC-------HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHH
Q 008475 408 KEMFKAMDTDNSGAITFDELKA----GLRRYGSTLK-------DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476 (564)
Q Consensus 408 ~~~F~~~D~d~~G~I~~~el~~----~l~~~~~~~~-------~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~ 476 (564)
+++|..+|.|++|.|+.+||.. +++.+|..++ ..+++.+|..+|.|++|.|+|+||+.++........+
T Consensus 338 ~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~ 417 (484)
T 3nyv_A 338 TAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR 417 (484)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcH
Confidence 9999999999999999999954 4445566666 7889999999999999999999999988766555667
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
+.+..+|+.+|+|+||+|+.+||..++...++++++++++|..+|.|+||.|+|+||+++|.+.
T Consensus 418 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~ 481 (484)
T 3nyv_A 418 ERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481 (484)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence 8899999999999999999999999998878999999999999999999999999999999765
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-78 Score=645.05 Aligned_cols=448 Identities=36% Similarity=0.592 Sum_probs=398.5
Q ss_pred ccccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH----------HhHHHHHHHHHHHHhhcCCCC
Q 008475 92 HKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR----------EDVEDVRREIQIMHHLAGHKN 161 (564)
Q Consensus 92 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~~h~n 161 (564)
.....+.++|.++++||+|+||+||+|.+..++..||+|++.+...... ...+.+.+|+.++++++ |||
T Consensus 29 ~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpn 107 (504)
T 3q5i_A 29 KKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-HPN 107 (504)
T ss_dssp EECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC-CTT
T ss_pred ccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC-CCC
Confidence 3455677889999999999999999999999999999999976543211 34567899999999997 999
Q ss_pred ccEEEEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCc
Q 008475 162 IVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS 241 (564)
Q Consensus 162 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~ 241 (564)
|+++++++.+...+|||||||+||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||+...+....
T Consensus 108 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 108 IIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSS
T ss_pred CCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCcc
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999954444457
Q ss_pred EEEeeCCCccccCCCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC
Q 008475 242 LKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE 321 (564)
Q Consensus 242 ~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 321 (564)
+||+|||++............+||+.|+|||++.+.|+.++||||+||++|+|++|.+||.+.+..+++..+.++...++
T Consensus 188 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~ 267 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267 (504)
T ss_dssp EEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred EEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 99999999998776666677889999999999998899999999999999999999999999999999999999888777
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCC---CCCHHHHHHHHhhhhhhHHHHHHHHHhhhh
Q 008475 322 SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDR---SLDPAVLSRLKQFSAMNKLKKMALRVIAES 398 (564)
Q Consensus 322 ~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~---~~~~~~~~~~k~~~~~n~~~~~~~~~~~~~ 398 (564)
.+.+..+|+++++||.+||.+||.+|||+.++|+||||++....... ......+.++++|...++++++.+..+...
T Consensus 268 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i~~~ 347 (504)
T 3q5i_A 268 FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSK 347 (504)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 66677899999999999999999999999999999999875533221 122455778899999999999999888877
Q ss_pred h-hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhh--------CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 399 L-SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY--------GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 399 ~-~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~--------~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
+ +++++..++++|+.+|.|++|.|+.+||..+++.+ +..+...+++.+|..+|.|++|.|+|+||+.++..
T Consensus 348 ~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 427 (504)
T 3q5i_A 348 LTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMD 427 (504)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSC
T ss_pred CCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 6 88999999999999999999999999999999887 55778899999999999999999999999998876
Q ss_pred hchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 470 LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 470 ~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
......++.+..+|+.+|.|+||.|+.+||+.++...++++++++++|..+|.|+||.|+|+||+.+|.+.
T Consensus 428 ~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 498 (504)
T 3q5i_A 428 KQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKI 498 (504)
T ss_dssp HHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCSCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHH
T ss_pred hhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 65555677899999999999999999999999998888999999999999999999999999999999765
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-78 Score=643.61 Aligned_cols=449 Identities=36% Similarity=0.626 Sum_probs=397.6
Q ss_pred cccccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 91 GHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 91 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
......+.++|++.+.||+|+||.||+|++..++..||+|++.+... .......+.+|+.+++.+. ||||+++++++.
T Consensus 29 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~ 106 (494)
T 3lij_A 29 TSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV-STSSNSKLLEEVAVLKLLD-HPNIMKLYDFFE 106 (494)
T ss_dssp CCCBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCC-CTTBCCEEEEEE
T ss_pred ecCCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecccc-CchHHHHHHHHHHHHHhCC-CCCCCeEEEEEE
Confidence 33455677889999999999999999999999999999999976543 2333567889999999997 999999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
+...+|+|||||++|+|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++
T Consensus 107 ~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 107 DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 99999999999999999999998889999999999999999999999999999999999999965555677999999999
Q ss_pred cccCCCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
............+||+.|+|||++.+.|+.++||||+||++|+|++|.+||.+.+..+++..+..+...+..+.+..+|+
T Consensus 187 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 266 (494)
T 3lij_A 187 AVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSE 266 (494)
T ss_dssp EECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCH
T ss_pred eECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCH
Confidence 88776666677889999999999988899999999999999999999999999999999999999988888877888999
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC----CCCCCCCHHHHHHHHhhhhhhHHHHHHHHHhhhhh-hHHHHH
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV----APDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESL-SEEEIA 405 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~----~~~~~~~~~~~~~~k~~~~~n~~~~~~~~~~~~~~-~~~~~~ 405 (564)
.+++||.+||+.||.+|||+.++|+||||+.... ....+.....+.++++|...++++++.+..+...+ +++++.
T Consensus 267 ~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia~~~~~~~~~~ 346 (494)
T 3lij_A 267 GAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETK 346 (494)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHHHHSCCHHHHH
T ss_pred HHHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHHHhcccHHHHH
Confidence 9999999999999999999999999999986321 12233445678899999999999999998888776 889999
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCC--------CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGS--------TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREE 477 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~--------~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~ 477 (564)
+++++|+.+|.|++|.|+.+||..+++.++. .+...+++.+|..+|.|++|.|+|+||+.++.........+
T Consensus 347 ~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~ 426 (494)
T 3lij_A 347 ELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKD 426 (494)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHH
T ss_pred HHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccHH
Confidence 9999999999999999999999999998854 44588899999999999999999999999887665555677
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 478 HLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 478 ~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
.+..+|+.+|+|+||.|+.+||+.++...++++++++++|..+|.|+||.|+|+||+.+|.+..
T Consensus 427 ~~~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 490 (494)
T 3lij_A 427 KLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC 490 (494)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHC-CCSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhhc
Confidence 8999999999999999999999999987778999999999999999999999999999998653
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-77 Score=637.83 Aligned_cols=444 Identities=40% Similarity=0.665 Sum_probs=376.7
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..+.++|++.+.||+|+||+||+|.+..+++.||||++.+... .......+.+|+.+++++. ||||+++++++.+...
T Consensus 18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~ 95 (486)
T 3mwu_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSS 95 (486)
T ss_dssp CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH-BCSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHHHhCC-CCCcCeEEEEEEcCCE
Confidence 3567789999999999999999999999999999999965432 1223567889999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+|+|||||.+++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+|||++....
T Consensus 96 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 99999999999999999888899999999999999999999999999999999999999665667789999999998877
Q ss_pred CCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
........+||+.|+|||++.+.|+.++|||||||++|+|++|.+||.+.+..+++..+..+...+..+.+..+|+++++
T Consensus 176 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 255 (486)
T 3mwu_A 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255 (486)
T ss_dssp CC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHH
T ss_pred CCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHH
Confidence 66666778899999999999988999999999999999999999999999999999999999888887777889999999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCC----CCHHHHHHHHhhhhhhHHHHHHHHHhhhhh-hHHHHHhHhh
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRS----LDPAVLSRLKQFSAMNKLKKMALRVIAESL-SEEEIAGLKE 409 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~----~~~~~~~~~k~~~~~n~~~~~~~~~~~~~~-~~~~~~~l~~ 409 (564)
||.+||..||.+|||+.++|+||||+......... .....+.++++|...+++++..+..+...+ +.+++..+++
T Consensus 256 li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~~ 335 (486)
T 3mwu_A 256 LIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTE 335 (486)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 99999999999999999999999998755432211 123446678899999999999988888776 8899999999
Q ss_pred hhhcccCCCCCCCCHHHHHHHHH----hhCCCCC----------HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhH
Q 008475 410 MFKAMDTDNSGAITFDELKAGLR----RYGSTLK----------DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475 (564)
Q Consensus 410 ~F~~~D~d~~G~I~~~el~~~l~----~~~~~~~----------~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~ 475 (564)
+|+.+|.|++|.|+.+||..++. .+|..++ ..+++.+|..+|.|++|.|+|+||+..+........
T Consensus 336 ~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~ 415 (486)
T 3mwu_A 336 IFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLS 415 (486)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCC
T ss_pred HHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccch
Confidence 99999999999999999966554 4466555 888999999999999999999999988766555556
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+.+..+|+.+|.|+||.|+.+||+.++...| +++++++++|..+|.|+||.|+|+||++++...
T Consensus 416 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 416 RERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp HHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 67899999999999999999999999999887 888999999999999999999999999998754
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-64 Score=499.83 Aligned_cols=258 Identities=33% Similarity=0.557 Sum_probs=235.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+++|++|+ |||||+++++|+++..+|||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEE
Confidence 45999999999999999999999999999999998655434445678999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC--
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-- 256 (564)
||||+||+|.+++.+.+.+++..++.|+.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+.....
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl---~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECCTTTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE---cCCCCEEEEEcCCceecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999 78889999999999876433
Q ss_pred -CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 -QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
....+.+||+.|||||++.+ .|+.++||||+||++|+|++|++||.+.+..+++..|.++.+.++ ..+|+++++
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~d 263 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARD 263 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTCCHHHHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----cccCHHHHH
Confidence 24457899999999999986 599999999999999999999999999999999999999887665 358999999
Q ss_pred HHHHhcccCCCCCCCHHH------HhcCCCcCCCCC
Q 008475 335 LIRKMLCSQPSERLTAHE------VLCHPWICENGV 364 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~------vl~hp~~~~~~~ 364 (564)
||.+||.+||++|||++| +++||||++..+
T Consensus 264 li~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw 299 (311)
T 4aw0_A 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299 (311)
T ss_dssp HHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred HHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCH
Confidence 999999999999999987 689999987654
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-63 Score=485.00 Aligned_cols=254 Identities=37% Similarity=0.647 Sum_probs=216.0
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||+||+|++..+|+.||||++.+.........+.+.+|+.+|+.++ |||||++++++++...+|||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEEE
Confidence 45999999999999999999999999999999998766555566778999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|||| +|+|.+++.+++++++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+.......
T Consensus 92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE---CCCCCEEEeecCCCeecCCCCc
Confidence 9999 78999999999999999999999999999999999999999999999999 7788999999999988766666
Q ss_pred eecccCCCcccchhhhhhc-C-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLKH-Y-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
..+.+||+.|||||++.+. | +.++||||+||++|+|+||++||.+.+...+++.+.++...++ ..+|+++++||
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 243 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KFLSPGAAGLI 243 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHH
Confidence 6778999999999999854 4 6899999999999999999999999999999999988876654 45899999999
Q ss_pred HHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.+||++||++|||++|+|+||||+.
T Consensus 244 ~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 244 KRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp HHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred HHHccCChhHCcCHHHHHcCccccc
Confidence 9999999999999999999999975
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-62 Score=492.20 Aligned_cols=258 Identities=28% Similarity=0.492 Sum_probs=230.9
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|++.++||+|+||+||+|+++.+|+.||||++...... ..+.+.+|+.+|+.++ |||||+++++|.+++.+|
T Consensus 72 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~ 147 (346)
T 4fih_A 72 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELW 147 (346)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 456799999999999999999999999999999999765432 2345789999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||||+||+|.+++.. +++++..++.|+.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 148 ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 148 VVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp EEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSS
T ss_pred EEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---CCCCCEEEecCcCceecCCC
Confidence 99999999999998865 579999999999999999999999999999999999999 77889999999999876543
Q ss_pred -CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 -QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
....+.+||+.|||||++.+ .|+.++|||||||++|||++|++||.+.+..+++..|..+.. .....+..+|+++++
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~d 302 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLKG 302 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCCSCGGGSCHHHHH
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCccccCCHHHHH
Confidence 44567899999999999985 599999999999999999999999999999998888876532 223344578999999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
||.+||.+||++|||++|+|+||||++..
T Consensus 303 li~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 303 FLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 99999999999999999999999998754
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-63 Score=495.09 Aligned_cols=256 Identities=25% Similarity=0.505 Sum_probs=226.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|++|+ |||||+++++|+++..+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMK-HPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEEE
Confidence 579999999999999999999999999999999986654 4556788999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 179 MELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||+||+|.++|... ..+++..++.|+.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE---CTTCCEEECSTTEESCCCHH
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCCEEEcccccceeecCC
Confidence 9999999999999754 357999999999999999999999999999999999999 77889999999999876543
Q ss_pred C-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 Q-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
. .....+||+.|||||++.+ .|+.++|||||||++|||+||++||.+.+..+++..|.++.+.. .+..+|+++++
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~---~~~~~s~~~~~ 255 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP---VSLHYSYDLRS 255 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---CCTTSCHHHHH
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC---CCccCCHHHHH
Confidence 2 3456789999999999986 59999999999999999999999999999999999998876542 33568999999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
||.+||++||++|||++|+|+||||++.
T Consensus 256 li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 256 LVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 9999999999999999999999999864
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-61 Score=475.11 Aligned_cols=254 Identities=23% Similarity=0.384 Sum_probs=222.2
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec----CCeEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----SLCVH 176 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----~~~~~ 176 (564)
|++.++||+|+||+||+|.+..++..||+|++..... .....+.+.+|+.+|++|+ |||||+++++|.+ +..+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~~~ 105 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEEETTEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEeeccCCCcEEE
Confidence 4778889999999999999999999999999976544 4556778999999999997 9999999999875 45689
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
||||||+||+|.+++.+.+.+++..++.|+.||+.||.|||++| ||||||||+|||++ +.++.+||+|||+|+...
T Consensus 106 lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~--~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES--STTSCEEECCTTGGGGCC
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE--CCCCCEEEEeCcCCEeCC
Confidence 99999999999999999899999999999999999999999999 99999999999993 246799999999998654
Q ss_pred CCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
. ....+.+||+.|||||++.+.|+.++|||||||++|||+||++||.+.. ...+...+..+..... ....++++++
T Consensus 184 ~-~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~ 260 (290)
T 3fpq_A 184 A-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS--FDKVAIPEVK 260 (290)
T ss_dssp T-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGG--GGGCCCHHHH
T ss_pred C-CccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCC--CCccCCHHHH
Confidence 3 4456789999999999999889999999999999999999999997654 4556666665543222 2345789999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+||.+||..||++|||++|+|+||||++
T Consensus 261 ~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 261 EIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHccCChhHCcCHHHHhcCccccC
Confidence 9999999999999999999999999986
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-62 Score=499.68 Aligned_cols=259 Identities=28% Similarity=0.498 Sum_probs=231.8
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...+.|++.++||+|+||+||+|+++.+|+.||||++..... ...+.+.+|+.+|+.|+ |||||+++++|.+.+.+
T Consensus 148 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~ 223 (423)
T 4fie_A 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDEL 223 (423)
T ss_dssp CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred ChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCC-CCCCCceEEEEEECCEE
Confidence 345679999999999999999999999999999999976543 23456789999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|||||||+||+|.+++.. +.+++..++.|+.||+.||.|||++|||||||||+|||| +.++.+||+|||+|+....
T Consensus 224 ~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl---~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 224 WVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEecCccceECCC
Confidence 999999999999998864 579999999999999999999999999999999999999 7788999999999987654
Q ss_pred C-CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 G-QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
. ....+.+||+.|||||++.+ .|+.++|||||||++|||++|++||.+.+..+++..|..+.. .....+..+|++++
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~ 378 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLK 378 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCCSCTTSSCHHHH
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCcccccCCHHHH
Confidence 3 44567899999999999985 599999999999999999999999999999998888876533 23334567899999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+||.+||..||++|||+.|+|+||||++..
T Consensus 379 dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 379 GFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence 999999999999999999999999998754
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-62 Score=481.73 Aligned_cols=256 Identities=28% Similarity=0.478 Sum_probs=222.9
Q ss_pred cceeecccccccCCeEEEEEEEc---cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
++|++++.||+|+||+||+|++. .+++.||||++.+.... ......+.+|+++|++++ |||||+++++|+++..+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK-VRDRVRTKMERDILVEVN-HPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE-EEECC------CCCCCCC-CTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC-hHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEE
Confidence 46999999999999999999974 46789999999765432 222346788999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|||||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+....
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTSCEEEESSEEEEC---
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE---cCCCCEEecccccceeccC
Confidence 9999999999999999999999999999999999999999999999999999999999 7888999999999986543
Q ss_pred -CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 -GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 -~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.....+.+||+.|||||++.+ .|+.++|||||||++|||+||++||.+.+..+++..|.++...++ ..+|++++
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~ 254 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQ 254 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHH
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CcCCHHHH
Confidence 344567899999999999985 599999999999999999999999999999999999998876554 45899999
Q ss_pred HHHHHhcccCCCCCCC-----HHHHhcCCCcCCCC
Q 008475 334 DLIRKMLCSQPSERLT-----AHEVLCHPWICENG 363 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s-----~~~vl~hp~~~~~~ 363 (564)
+||.+||++||++||| ++|+++||||++..
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~id 289 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence 9999999999999998 58999999998743
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-60 Score=476.57 Aligned_cols=253 Identities=25% Similarity=0.349 Sum_probs=222.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.++||+|+||+||+|+++.+|+.||||++...... .+|+.+++.|+ |||||+++++|.++..+|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--------~~E~~il~~l~-HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLS-SPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--------THHHHTTTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH--------HHHHHHHHhCC-CCCCCcEEEEEEECCEEEEE
Confidence 4588999999999999999999999999999999765432 36999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCC-cEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF-SLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~-~~kl~DfG~~~~~~~~~ 257 (564)
||||+||+|.+++...+++++..++.|+.||+.||.|||++|||||||||+|||+ +.++ .+||+|||+|+......
T Consensus 129 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL---SSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE---CTTSCCEEECCCTTCEEC----
T ss_pred EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---eCCCCEEEEeeCCCCeEccCCC
Confidence 9999999999999998999999999999999999999999999999999999999 6665 69999999998765432
Q ss_pred c------eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 258 I------FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 258 ~------~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
. ....+||+.|||||++.+ .|+.++|||||||++|||+||++||.+.+..+++..|..+...+. ..++.+|+
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~ 284 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR-EIPPSCAP 284 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGG-GSCTTSCH
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCch-hcCccCCH
Confidence 1 234689999999999986 599999999999999999999999999888888888887665432 23457899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHH-------------hcCCCcCCCCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEV-------------LCHPWICENGV 364 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~v-------------l~hp~~~~~~~ 364 (564)
++.+||.+||++||.+|||+.|+ |+|||+.+...
T Consensus 285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~ 331 (336)
T 4g3f_A 285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKE 331 (336)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCC
Confidence 99999999999999999999997 67999987543
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-59 Score=478.17 Aligned_cols=261 Identities=25% Similarity=0.395 Sum_probs=226.9
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----- 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----- 171 (564)
+.++|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|++|+ |||||++++++..
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 129 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHFK-HDNIIAIKDILRPTVPYG 129 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSSCTT
T ss_pred CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhcC-CCCcceEeeeeecccccc
Confidence 55789999999999999999999999999999999975433 4556678889999999997 9999999999764
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 172 -SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 172 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
...+|||||||+ |+|.+++...+++++..++.|++||+.||.|||++|||||||||+|||+ +.++.+||+|||+|
T Consensus 130 ~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~---~~~~~~Ki~DFGla 205 (398)
T 4b99_A 130 EFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMA 205 (398)
T ss_dssp TCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred cCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc---CCCCCEEEeeccee
Confidence 467999999995 6899999988999999999999999999999999999999999999999 78889999999999
Q ss_pred cccCC-----CCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC
Q 008475 251 VFFKP-----GQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD 323 (564)
Q Consensus 251 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 323 (564)
+.... .....+.+||+.|||||++.+ .|+.++||||+||++|||++|++||.+.+..+.+..|......++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 86532 223456899999999999875 47999999999999999999999999999988888876533222110
Q ss_pred ---------------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 324 ---------------------------PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 324 ---------------------------~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.++.+++++++||.+||.+||.+|||++|+|+||||++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 352 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence 1235789999999999999999999999999999999754
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-57 Score=459.09 Aligned_cols=257 Identities=27% Similarity=0.453 Sum_probs=211.5
Q ss_pred ccccceeecccccccCCeEEEEEEEc---cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
.+.++|++.++||+|+||+||+|+++ .+++.||+|++.+.. ...++.+|+++|+.+.+||||++++++|.+.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 46678999999999999999999875 457899999986532 2356789999999997799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 173 LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
+++|||||||+||+|.+++ +.+++.+++.+++||+.||+|||++||+||||||+|||++ .+.+.+||+|||+|+.
T Consensus 93 ~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~--~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYN--RRLKKYALVDFGLAQG 167 (361)
T ss_dssp TEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTCEE
T ss_pred CEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEe--CCCCeEEECcCCCCcc
Confidence 9999999999999999988 3699999999999999999999999999999999999994 2337899999999975
Q ss_pred cCCC-----------------------------CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCC
Q 008475 253 FKPG-----------------------------QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPF 301 (564)
Q Consensus 253 ~~~~-----------------------------~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf 301 (564)
.... ....+.+||+.|+|||++.+ .|+.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 4322 12345689999999999975 4899999999999999999999999
Q ss_pred CCC-CHHHHHHHHHcC--------------------------------------C------------ccCCCCCCCCCCH
Q 008475 302 WAE-TQQGIFDAVLKG--------------------------------------H------------IDFESDPWPLISD 330 (564)
Q Consensus 302 ~~~-~~~~~~~~i~~~--------------------------------------~------------~~~~~~~~~~~s~ 330 (564)
... +..+.+..|.+- . .......+..+|+
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~ 327 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD 327 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence 654 344444333210 0 0001123556899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+++|||.+||++||++|||++|+|+||||++.
T Consensus 328 ~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 328 EAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred HHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 99999999999999999999999999999874
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-56 Score=483.76 Aligned_cols=267 Identities=36% Similarity=0.596 Sum_probs=244.1
Q ss_pred cccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 93 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
+.+.+-++|++.+.||+|+||+||+|+++.+|+.||+|++.+. .....+.+.+|+.+|+.|+ |||||+++++|.+.
T Consensus 151 ~~~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~---~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~ 226 (573)
T 3uto_A 151 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDD 226 (573)
T ss_dssp BSSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHHHTC-CTTBCCEEEEEECS
T ss_pred CCCcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc---chhhHHHHHHHHHHHHhCC-CCCCCeEEEEEEEC
Confidence 3445567899999999999999999999999999999999754 3445678899999999997 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 173 LCVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
..+|||||||+||+|.++|.. .+.+++..++.+++||+.||.|||++||+||||||+|||+.. +..+.+||+|||+|+
T Consensus 227 ~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~-~~~~~vKl~DFG~a~ 305 (573)
T 3uto_A 227 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTA 305 (573)
T ss_dssp SEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCSSCE
T ss_pred CEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccC-CCCCCEEEeecccee
Confidence 999999999999999999864 467999999999999999999999999999999999999943 234789999999999
Q ss_pred ccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
...+.......+||+.|||||++.+ .|+.++|||||||++|||++|.+||.+.+..+++..|.++...++...+..+|+
T Consensus 306 ~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 385 (573)
T 3uto_A 306 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 385 (573)
T ss_dssp ECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCH
T ss_pred EccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCH
Confidence 9888777788899999999999986 599999999999999999999999999999999999999988888777888999
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
++++||.+||+.||.+|||+.|+|+||||+....
T Consensus 386 ~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 386 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred HHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 9999999999999999999999999999997654
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-57 Score=448.06 Aligned_cols=254 Identities=26% Similarity=0.368 Sum_probs=202.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-----
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL----- 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~----- 173 (564)
+.|++++.||+|+||+||+|+++.+|+.||||++.... .....+.+.+|+.+|++|+ |||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLE-HPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEecCccccc
Confidence 35999999999999999999999999999999997543 4555678999999999997 999999999997543
Q ss_pred -------eEEEEEeccCCCchHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEE
Q 008475 174 -------CVHIVMELCAGGELFDRIIQRGHY---SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLK 243 (564)
Q Consensus 174 -------~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~k 243 (564)
.+|||||||+||+|.+++...+.+ ++..++.|+.||+.||+|||++|||||||||+|||+ +.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl---~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEE---CCCCcEE
Confidence 479999999999999999876554 456789999999999999999999999999999999 7788999
Q ss_pred EeeCCCccccCCCC-------------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HH
Q 008475 244 AIDFGLSVFFKPGQ-------------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ-QG 308 (564)
Q Consensus 244 l~DfG~~~~~~~~~-------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~ 308 (564)
|+|||+|+...... ..+..+||+.|||||++.+ .|+.++|||||||++|||++ ||.+... ..
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~ 235 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR 235 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH
Confidence 99999998765332 1234689999999999985 59999999999999999996 8865432 23
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
.+..+.....+ +.+...++.+.+||.+||++||.+|||+.|+|+||||++...
T Consensus 236 ~~~~~~~~~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 288 (299)
T 4g31_A 236 TLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDF 288 (299)
T ss_dssp HHHHHHTTCCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC--
T ss_pred HHHHHhcCCCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCC
Confidence 33344433221 112335678899999999999999999999999999987543
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-56 Score=443.51 Aligned_cols=251 Identities=22% Similarity=0.378 Sum_probs=217.6
Q ss_pred ccceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
++.|.+.+.||+|+||+||+|++. .++..||||++... .....+.+.+|+++|++|+ |||||++++++.++
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~ 87 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEG 87 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeC
Confidence 356999999999999999999875 36788999999643 4566778999999999997 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCC
Q 008475 173 LCVHIVMELCAGGELFDRIIQR-------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD 239 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~ 239 (564)
..+|||||||++|+|.++|... ..+++..+..|+.||+.||.|||+++||||||||+|||+ +.+
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl---~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE---CCC
Confidence 9999999999999999999764 368999999999999999999999999999999999999 778
Q ss_pred CcEEEeeCCCccccCCCCce---ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 008475 240 FSLKAIDFGLSVFFKPGQIF---TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVL 314 (564)
Q Consensus 240 ~~~kl~DfG~~~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~ 314 (564)
+.+||+|||+|+........ ....||+.|||||++.+ .|+.++|||||||++|||+| |+.||.+.+..+++..+.
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~ 244 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 244 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 89999999999876543322 23468999999999984 69999999999999999999 999999999999999998
Q ss_pred cCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 315 KGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 315 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
++.... .+..+|+++.+||.+||+.||++|||+.+| |+|+.
T Consensus 245 ~~~~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~ 285 (299)
T 4asz_A 245 QGRVLQ---RPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQ 285 (299)
T ss_dssp HTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHH
T ss_pred cCCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHH
Confidence 876432 234689999999999999999999999998 44553
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-56 Score=478.43 Aligned_cols=256 Identities=27% Similarity=0.412 Sum_probs=221.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHH---HHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR---EIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~---E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+.|+++++||+|+||+||+|+++.+|+.||||++.+...........+.+ ++.+++.+. |||||+++++|++...+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~-HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCC-CCCEeEEEEEEEECCEE
Confidence 56999999999999999999999999999999997654322222333344 455666665 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|||||||+||+|.++|.+.+.+++..++.|+.||+.||+|||++|||||||||+|||+ +.+|++||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl---d~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE---eCCCCEEecccceeeecCC
Confidence 9999999999999999999999999999999999999999999999999999999999 8889999999999987655
Q ss_pred CCceecccCCCcccchhhhh-h-cCCCcchHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 256 GQIFTDVVGSPYYVAPEVLL-K-HYGPEADVWTAGVILYILLSGVPPFWAET---QQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DvwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.. ..+.+||+.|||||++. + .|+.++|||||||++|||++|.+||.+.+ ..++...+......++ ..+|+
T Consensus 345 ~~-~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p----~~~S~ 419 (689)
T 3v5w_A 345 KK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSP 419 (689)
T ss_dssp CC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC----TTSCH
T ss_pred CC-CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC----ccCCH
Confidence 43 45679999999999996 3 59999999999999999999999997643 3455666666655443 46899
Q ss_pred HHHHHHHHhcccCCCCCCC-----HHHHhcCCCcCCCC
Q 008475 331 SAKDLIRKMLCSQPSERLT-----AHEVLCHPWICENG 363 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s-----~~~vl~hp~~~~~~ 363 (564)
++++||.+||++||.+|++ ++||++||||++..
T Consensus 420 ~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id 457 (689)
T 3v5w_A 420 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457 (689)
T ss_dssp HHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred HHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence 9999999999999999998 79999999999753
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-56 Score=438.88 Aligned_cols=248 Identities=23% Similarity=0.373 Sum_probs=205.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.+++.++||+|+||+||+|++. ..||||+++... .+....+.+.+|+.+|++++ |||||++++++.. +.+|||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTR-HVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSS-CCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECS-SSCEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecC-CCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEC-CeEEEE
Confidence 55888999999999999999854 369999986443 35667788999999999997 9999999998764 568999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
||||+||+|.++|... +++++..+..|+.||+.||.|||+++||||||||+|||+ ++++.+||+|||+|+.....
T Consensus 110 mEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl---~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp EECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEE---ETTEEEEECCCSSCBC-----
T ss_pred EEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEE---CCCCcEEEeeccCceecccCC
Confidence 9999999999999764 579999999999999999999999999999999999999 77889999999999875432
Q ss_pred --CceecccCCCcccchhhhhh----cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHcCCccCC-CCCCCCC
Q 008475 257 --QIFTDVVGSPYYVAPEVLLK----HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFD-AVLKGHIDFE-SDPWPLI 328 (564)
Q Consensus 257 --~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~-~i~~~~~~~~-~~~~~~~ 328 (564)
......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.+....+. .+.++..... ...+..+
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 266 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC 266 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTS
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccc
Confidence 23456789999999999963 48899999999999999999999998866554444 4444433222 2334578
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
|+++.+||.+||+.||++|||+.+|++
T Consensus 267 ~~~l~~li~~cl~~dP~~RPs~~ei~~ 293 (307)
T 3omv_A 267 PKAMKRLVADCVKKVKEERPLFPQILS 293 (307)
T ss_dssp CHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred hHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 999999999999999999999998754
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-56 Score=443.87 Aligned_cols=248 Identities=21% Similarity=0.351 Sum_probs=211.0
Q ss_pred cceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
+.|.+.++||+|+||+||+|++. .+++.||||++... +....+.+.+|+++|++|+ |||||++++++.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECC
Confidence 45888999999999999999865 36889999999643 4566778999999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC
Q 008475 174 CVHIVMELCAGGELFDRIIQR---------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~ 238 (564)
.+|||||||++|+|.+++... +++++..+..|+.||+.||.|||+++||||||||+|||+ +.
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl---~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV---GQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE---CC
Confidence 999999999999999998753 358999999999999999999999999999999999999 77
Q ss_pred CCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 008475 239 DFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAV 313 (564)
Q Consensus 239 ~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i 313 (564)
++.+||+|||+|+...... .....+||+.|||||++.+ .|+.++|||||||++|||+| |+.||.+.+..+++..+
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i 273 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 273 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHH
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 8899999999998764332 2345679999999999985 59999999999999999999 99999999999999998
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 314 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.++... +.+..+|+++.+||.+||+.||++|||+.||+++
T Consensus 274 ~~g~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~ 313 (329)
T 4aoj_A 274 TQGREL---ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313 (329)
T ss_dssp HHTCCC---CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred HcCCCC---CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 887532 2234689999999999999999999999999764
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-55 Score=438.51 Aligned_cols=249 Identities=20% Similarity=0.338 Sum_probs=216.6
Q ss_pred cceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
..+++.++||+|+||+||+|... .+++.||||++.... .....+.+.+|+.++++|+ |||||+++|++.++.
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQ-HPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCC-CCCCCCcceEEEECC
Confidence 34788899999999999999853 467899999996543 3345678999999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC
Q 008475 174 CVHIVMELCAGGELFDRIIQR----------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD 237 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~ 237 (564)
.++||||||++|+|.++|... ..+++..+..|+.||+.||.|||+++||||||||+|||| +
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl---~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV---Y 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---C
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE---C
Confidence 999999999999999999653 358999999999999999999999999999999999999 7
Q ss_pred CCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 008475 238 DDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDA 312 (564)
Q Consensus 238 ~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~ 312 (564)
+++.+||+|||+|+...... .....+||+.|||||++. +.|+.++|||||||++|||+| |..||.+.+..++...
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~ 259 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 259 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 78899999999998654332 234568999999999998 469999999999999999999 8999999999999999
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 313 VLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 313 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+..+.... .+..+|+++.+|+.+||+.||++|||+.+|+++
T Consensus 260 i~~~~~~~---~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 260 IRNRQVLP---CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCCC---CcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 88875432 235689999999999999999999999999875
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-55 Score=455.84 Aligned_cols=299 Identities=39% Similarity=0.683 Sum_probs=264.5
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..+.++|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+.+|+.+++.+. ||||+++++++.+...
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 84 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLK-HPNIVRLHDSISEEGH 84 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCC-BTTBCCEEEEEECSSE
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CcCCCeEEEEEEECCE
Confidence 3466789999999999999999999999999999999976543 4455678899999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
.|+|||||+||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+.....++.+||+|||++....
T Consensus 85 ~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 85 HYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp EEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999654467889999999998765
Q ss_pred CC-CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 255 PG-QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 255 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.. ......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+++..+..+...++.+.++.+++++
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 244 (444)
T 3soa_A 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244 (444)
T ss_dssp TTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred CCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHH
Confidence 43 33456789999999999986 59999999999999999999999999999999999999999998888888999999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHh
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVI 395 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~~n~~~~~~~~~~ 395 (564)
.+||.+||..||.+|||+.|+|+||||+..............+..+++|.+.++++++++..+
T Consensus 245 ~~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~klk~~~~~~~ 307 (444)
T 3soa_A 245 KDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVM 307 (444)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHHSCCCCCHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHcCCChhHCCCHHHHhcCccccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999865433334455678888999998888887765544
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-54 Score=440.96 Aligned_cols=300 Identities=37% Similarity=0.690 Sum_probs=266.0
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
...+.+.|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++.+. ||||+++++++.+..
T Consensus 24 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~ 101 (362)
T 2bdw_A 24 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HPNIVRLHDSIQEES 101 (362)
T ss_dssp CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred CCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCC
Confidence 34566789999999999999999999999999999999976543 4556778999999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
..|+|||||+||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+..++..+.+||+|||++...
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 102 FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 99999999999999999988888999999999999999999999999999999999999965545567999999999887
Q ss_pred CCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.........+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+...+...+..+...++...+..+++++
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 261 (362)
T 2bdw_A 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 261 (362)
T ss_dssp TTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHH
T ss_pred cCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence 76665667889999999999986 59999999999999999999999999999999999999998888877777899999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHh
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVI 395 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~~n~~~~~~~~~~ 395 (564)
.+||.+||..||.+|||+.++|+||||+.................+++|...++++.+.+..+
T Consensus 262 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 324 (362)
T 2bdw_A 262 KSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTM 324 (362)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTTSHHHHTHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHhcCcccCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999864333333445677888888888888877765443
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-54 Score=438.44 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=214.5
Q ss_pred ccccceeecccccccCCeEEEEEEEccCC-----cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATG-----IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
...++|++++.||+|+||+||+|.+..++ +.||||.+.... .....+.+.+|+.+|+++..|||||+++++|.
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 34577999999999999999999976543 579999996543 45556789999999999985699999999986
Q ss_pred c-CCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEe
Q 008475 171 D-SLCVHIVMELCAGGELFDRIIQR----------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLL 233 (564)
Q Consensus 171 ~-~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll 233 (564)
. +..+|||||||++|+|.++|... ..+++..+..|+.||+.||.|||+++||||||||+|||+
T Consensus 139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl 218 (353)
T 4ase_A 139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 218 (353)
T ss_dssp CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee
Confidence 5 46789999999999999999753 348999999999999999999999999999999999999
Q ss_pred ecCCCCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCH-H
Q 008475 234 VNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQ-Q 307 (564)
Q Consensus 234 ~~~~~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~-~ 307 (564)
++++.+||+|||+|+...... .....+||+.|||||++.+ .|+.++|||||||++|||+| |..||.+... .
T Consensus 219 ---~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~ 295 (353)
T 4ase_A 219 ---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 295 (353)
T ss_dssp ---CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred ---CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH
Confidence 778899999999998765433 2234678999999999985 69999999999999999998 9999988664 4
Q ss_pred HHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 308 GIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+...+..+... + ....+++++.+||.+||+.||++|||+.+|++|
T Consensus 296 ~~~~~i~~g~~~-~--~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 296 EFCRRLKEGTRM-R--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp HHHHHHHHTCCC-C--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCCC-C--CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 455555555322 2 224689999999999999999999999999987
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-53 Score=431.64 Aligned_cols=268 Identities=39% Similarity=0.668 Sum_probs=240.4
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH---HhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR---EDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
...+.+.|++.+.||+|+||.||+|.+..+|+.||+|++.+...... ...+.+.+|+.+++++. ||||+++++++.
T Consensus 7 ~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~ 85 (361)
T 2yab_A 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNIITLHDVYE 85 (361)
T ss_dssp CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCC-CTTBCCEEEEEE
T ss_pred CCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCC-CcCCCcEEEEEE
Confidence 34577889999999999999999999999999999999976543221 23567899999999997 999999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC-CCcEEEeeCCC
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD-DFSLKAIDFGL 249 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~-~~~~kl~DfG~ 249 (564)
+...+|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+. ...+||+|||+
T Consensus 86 ~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 99999999999999999999988888999999999999999999999999999999999999942211 12799999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
+............+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.+..+.+..+..+...++...+..+
T Consensus 166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 245 (361)
T 2yab_A 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245 (361)
T ss_dssp CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTS
T ss_pred ceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCC
Confidence 988776666677889999999999985 5999999999999999999999999999999999999998887776666789
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
++++++||.+||..||.+|||+.++|+||||+..
T Consensus 246 s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 9999999999999999999999999999999753
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-52 Score=421.89 Aligned_cols=256 Identities=36% Similarity=0.632 Sum_probs=235.2
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|++.+.||+|+||.||+|.+..+|+.||||++.+... .....+++.+|+.+++.++ ||||+++++++.+...+|+
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEE
Confidence 3569999999999999999999999999999999976543 5566778999999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTCCGGGSSSC
T ss_pred EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE---cCCCCEEEeeccCceecCCCC
Confidence 99999999999999988999999999999999999999999999999999999999 778899999999998877666
Q ss_pred ceecccCCCcccchhhhhhc-C-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLKH-Y-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
.....+||+.|+|||++.+. + +.++|||||||++|+|++|..||.+.+..++...+..+....+. .+++++.+|
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~l 244 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENL 244 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHH
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----CCCHHHHHH
Confidence 67778999999999999854 4 47899999999999999999999999999999999888765543 479999999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
|.+||..||.+|||++|+++||||...
T Consensus 245 i~~~L~~dP~~R~t~~eil~h~~~~~~ 271 (328)
T 3fe3_A 245 LKRFLVLNPIKRGTLEQIMKDRWINAG 271 (328)
T ss_dssp HHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred HHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence 999999999999999999999999864
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-52 Score=427.79 Aligned_cols=258 Identities=30% Similarity=0.530 Sum_probs=229.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|++..+++.||||++.+.........+.+.+|+.+++.+.+||||+++++++.+...+|+|
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 45999999999999999999999999999999997654334455677889999999987799999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~ 257 (564)
||||+||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ...
T Consensus 103 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl---~~~g~ikL~DFG~a~~~~~~~~ 179 (353)
T 3txo_A 103 MEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNGV 179 (353)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCC---
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE---CCCCCEEEccccceeecccCCc
Confidence 9999999999999988899999999999999999999999999999999999999 788899999999998643 233
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
.....+||+.|+|||++.+ .|+.++|||||||++|||++|+.||.+.+..+++..+..+...++ ..+++++.+||
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li 255 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLHEDATGIL 255 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHH
Confidence 4556789999999999985 599999999999999999999999999999999999998877655 34899999999
Q ss_pred HHhcccCCCCCCCH------HHHhcCCCcCCCC
Q 008475 337 RKMLCSQPSERLTA------HEVLCHPWICENG 363 (564)
Q Consensus 337 ~~~l~~dp~~R~s~------~~vl~hp~~~~~~ 363 (564)
.+||..||.+||++ +++++||||++..
T Consensus 256 ~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~ 288 (353)
T 3txo_A 256 KSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID 288 (353)
T ss_dssp HHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred HHHhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence 99999999999998 8999999998743
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-52 Score=428.07 Aligned_cols=297 Identities=35% Similarity=0.620 Sum_probs=243.6
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC--CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI--SREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
..+.++|++.+.||+|+||.||+|.+..+++.||||++...... .....+.+.+|+.+++.++ ||||+++++++.+.
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~ 98 (351)
T 3c0i_A 20 VLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIVELLETYSSD 98 (351)
T ss_dssp CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCC-CTTBCCEEEEEEET
T ss_pred CccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCC-CCCCCcEEEEEEeC
Confidence 34667899999999999999999999999999999998643221 1123567899999999997 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 173 LCVHIVMELCAGGELFDRIIQR----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
..+|+|||||+|++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+..++....+||+|||
T Consensus 99 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 99 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 9999999999999998877643 358999999999999999999999999999999999999654455669999999
Q ss_pred CccccCCCC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 249 LSVFFKPGQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 249 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+. ...+...+.++...+....+.
T Consensus 179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~~ 257 (351)
T 3c0i_A 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPRQWS 257 (351)
T ss_dssp TCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCCCCHHHHT
T ss_pred ceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCCCCccccc
Confidence 998765443 2445789999999999985 5999999999999999999999999875 456777777777666555556
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHH
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALR 393 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~~n~~~~~~~~ 393 (564)
.+++++.+||.+||..||.+|||+.++|+||||+...........+....+++++...++++.....
T Consensus 258 ~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 324 (351)
T 3c0i_A 258 HISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLA 324 (351)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSCCHHHHHHHHHHHHHHC-------
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999998744322333345667777777766666555443
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-52 Score=418.85 Aligned_cols=256 Identities=32% Similarity=0.534 Sum_probs=231.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+.+++.++ ||||+++++++.+...+|+|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCC-CCcCcceEEEEEeCCEEEEE
Confidence 46999999999999999999999999999999997653323344667889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~ 257 (564)
|||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ...
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE---CCCCCEEEeeccchhhcccCCC
Confidence 9999999999999988899999999999999999999999999999999999999 778899999999998643 334
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
.....+||+.|+|||++.+ .|+.++|||||||++|||++|..||.+.+...+...+..+...++ ..+++++.+||
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 236 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLL 236 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHH
Confidence 4566789999999999975 599999999999999999999999999999889988888766554 35899999999
Q ss_pred HHhcccCCCCCC-----CHHHHhcCCCcCCC
Q 008475 337 RKMLCSQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 337 ~~~l~~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
.+||..||.+|| +++++++||||...
T Consensus 237 ~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 999999999999 99999999999864
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-51 Score=417.54 Aligned_cols=292 Identities=38% Similarity=0.664 Sum_probs=235.0
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+.+.+.|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++++. ||||+++++++.+...
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 122 (349)
T 2w4o_A 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTE 122 (349)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCC-CCCCcceeeeEecCCe
Confidence 456678999999999999999999999999999999997532 3456788999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
.++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+|||++....
T Consensus 123 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 123 ISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp EEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred EEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 99999999999999999888889999999999999999999999999999999999999654457899999999998766
Q ss_pred CCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ-GIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.........||+.|+|||++.+ .++.++|||||||++|+|++|..||...... .++..+..+...+..+.+..++.++
T Consensus 203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 282 (349)
T 2w4o_A 203 HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNA 282 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHH
T ss_pred cccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHH
Confidence 5555566789999999999985 5999999999999999999999999876544 4677788777776666677899999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHH
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRV 394 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~~n~~~~~~~~~ 394 (564)
.+||.+||..||++|||+.++|+||||...... .........+++++....++++.....
T Consensus 283 ~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (349)
T 2w4o_A 283 KDLVRKLIVLDPKKRLTTFQALQHPWVTGKAAN--FVHMDTAQKKLQEFNARRKLKAAVKAV 342 (349)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCC--CSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHhcCcccCCCccc--hhhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999875432 223455667778887777776665433
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-52 Score=418.96 Aligned_cols=262 Identities=29% Similarity=0.553 Sum_probs=237.5
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.++|++.+.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++.++ ||||+++++++.+...++
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~ 77 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIAR-HRNILHLHESFESMEELV 77 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCC-CCCCCeEeEEEecCCEEE
Confidence 567899999999999999999999999999999998643 334567889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+|||||+|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+... .++.+||+|||++.....
T Consensus 78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp EEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-CCCCEEEEECCCCeECCC
Confidence 999999999999999765 369999999999999999999999999999999999999431 267899999999998877
Q ss_pred CCceecccCCCcccchhhhhhc-CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
........||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+++..+..+...++...++.+|+++.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T 1tki_A 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHH
Confidence 7767778899999999999864 899999999999999999999999999999999999998887776666789999999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
||.+||..||.+|||+.|+|+||||+....
T Consensus 237 li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~ 266 (321)
T 1tki_A 237 FVDRLLVKERKSRMTASEALQHPWLKQKIE 266 (321)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHSHHHHSCGG
T ss_pred HHHHHcCCChhHCcCHHHHhcChhhccCcc
Confidence 999999999999999999999999987543
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=424.62 Aligned_cols=258 Identities=26% Similarity=0.466 Sum_probs=226.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.++||+|+||+||+|+++.+++.||+|++.+.........+.+..|..++.++.+||||++++++|.+...+|+|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 45999999999999999999999999999999998776655556667889999999886699999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc-CCCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~-~~~~ 257 (564)
||||+||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.. ....
T Consensus 132 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---CCCCCEEEeecceeeecccCCC
Confidence 9999999999999988899999999999999999999999999999999999999 78889999999999863 3445
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC---------CHHHHHHHHHcCCccCCCCCCCC
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE---------TQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
.....+||+.|+|||++.+ .|+.++|||||||++|||++|+.||... ....+...+..+...++ ..
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~ 284 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RS 284 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCC----TT
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCC----Cc
Confidence 5667899999999999985 5999999999999999999999999642 23446667777665554 35
Q ss_pred CCHHHHHHHHHhcccCCCCCCCH------HHHhcCCCcCCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTA------HEVLCHPWICENG 363 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~------~~vl~hp~~~~~~ 363 (564)
+++++++||.+||+.||.+||++ .+|++||||+...
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~ 326 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 326 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCC
T ss_pred CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCC
Confidence 89999999999999999999985 7999999998743
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=415.77 Aligned_cols=267 Identities=39% Similarity=0.693 Sum_probs=236.6
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH---HhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR---EDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..+.+.|++.+.||+|+||.||+|.+..++..||+|++........ ...+.+.+|+.+++.++ ||||+++++++.+
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~ 85 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYEN 85 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEEC
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEe
Confidence 4566789999999999999999999999999999999976543221 23567889999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC-CCCcEEEeeCCCc
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD-DDFSLKAIDFGLS 250 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~-~~~~~kl~DfG~~ 250 (564)
...+++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+ ....+||+|||++
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999999998888899999999999999999999999999999999999994321 1227999999999
Q ss_pred cccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+......++...+..++
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSC
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCC
Confidence 88765555667789999999999984 59999999999999999999999999999888888888777666555556789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 246 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 999999999999999999999999999999753
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-52 Score=419.86 Aligned_cols=258 Identities=28% Similarity=0.457 Sum_probs=231.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|+++.+++.||+|++.+.........+.+..|..++..+.+||||+++++++.+...+|+|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 45999999999999999999999999999999997653322334567889999999885599999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~ 257 (564)
||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.... ..
T Consensus 97 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE---CCCCCEEEeEChhhhhcccCCC
Confidence 9999999999999988899999999999999999999999999999999999999 7788999999999986432 23
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
.....+||+.|+|||++.+ .|+.++|||||||++|||++|..||.+.+..+++..+..+...++ ..+++++.+||
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 249 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLL 249 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----cccCHHHHHHH
Confidence 4556789999999999985 599999999999999999999999999999999999888765544 35899999999
Q ss_pred HHhcccCCCCCCCHH-HHhcCCCcCCCC
Q 008475 337 RKMLCSQPSERLTAH-EVLCHPWICENG 363 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~-~vl~hp~~~~~~ 363 (564)
.+||..||.+||++. ++++||||+...
T Consensus 250 ~~lL~~dp~~R~~~~~~i~~hp~f~~~~ 277 (345)
T 1xjd_A 250 VKLFVREPEKRLGVRGDIRQHPLFREIN 277 (345)
T ss_dssp HHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred HHHhcCCHhHcCCChHHHHcCccccCCC
Confidence 999999999999998 999999998754
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-51 Score=418.80 Aligned_cols=258 Identities=34% Similarity=0.523 Sum_probs=209.0
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||.||+|++..+++.||+|++...... .+.+.+|+.+++.++ ||||+++++++.+...+|+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLR-HPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCC-CCCCCcEEEEEeeCCEEEE
Confidence 45699999999999999999999999999999999754322 246789999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+.. +..+.+||+|||++.......
T Consensus 94 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~-~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 94 IMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECS-SSSCCEEECCCCCC-------
T ss_pred EEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC-CCCceEEEeecCccccccccC
Confidence 9999999999999988889999999999999999999999999999999999999932 122359999999998655444
Q ss_pred ceecccCCCcccchhhhhh-cCCC-cchHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGP-EADVWTAGVILYILLSGVPPFWAETQ----QGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~-~~DvwSlG~il~elltg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.....+||+.|+|||++.+ .++. ++|||||||++|+|++|+.||.+... ...+..+......++. ...++++
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~ 250 (361)
T 3uc3_A 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD--DIRISPE 250 (361)
T ss_dssp --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCT--TSCCCHH
T ss_pred CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCC--cCCCCHH
Confidence 4556789999999999975 4544 48999999999999999999987543 4455555555444332 3458999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+.+||.+||..||.+|||+.++++||||....
T Consensus 251 ~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 282 (361)
T 3uc3_A 251 CCHLISRIFVADPATRISIPEIKTHSWFLKNL 282 (361)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred HHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence 99999999999999999999999999997643
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-51 Score=413.57 Aligned_cols=258 Identities=26% Similarity=0.464 Sum_probs=229.6
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++++.+||||+++++++.+...+|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 45999999999999999999999999999999998877666777888999999999985699999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~ 257 (564)
|||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ...
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCGGGCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEEeccccccccCCCC
Confidence 9999999999999888899999999999999999999999999999999999999 778899999999998643 334
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCC---------CCHHHHHHHHHcCCccCCCCCCCC
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWA---------ETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~---------~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
.....+||+.|+|||++.+ .|+.++|||||||++|||++|+.||.. .....+...+..+...++ ..
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~ 241 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RS 241 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC----TT
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC----CC
Confidence 4566789999999999985 599999999999999999999999965 233456666776665544 35
Q ss_pred CCHHHHHHHHHhcccCCCCCCCH------HHHhcCCCcCCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTA------HEVLCHPWICENG 363 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~------~~vl~hp~~~~~~ 363 (564)
+++++.+||.+||..||.+||++ .++++||||+...
T Consensus 242 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~ 283 (345)
T 3a8x_A 242 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 283 (345)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence 89999999999999999999995 8999999998643
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-51 Score=402.09 Aligned_cols=267 Identities=39% Similarity=0.739 Sum_probs=244.1
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.++++++ ||||+++++++......
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFH 80 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEcCCEE
Confidence 466789999999999999999999999999999999976543 5566778999999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
++||||+++++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+||++..++..+.+||+|||++.....
T Consensus 81 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 99999999999999998888999999999999999999999999999999999999996555556699999999988776
Q ss_pred CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
........||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+..+...++.+.+..+++++.+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHH
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHH
Confidence 666667789999999999985 5899999999999999999999999999999999999998888887777889999999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
||.+||..||++|||+.++|+||||++...
T Consensus 241 li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (284)
T 3kk8_A 241 LIDSMLTVNPKKRITADQALKVPWICNRER 270 (284)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred HHHHHcccChhhCCCHHHHhcCccccCChh
Confidence 999999999999999999999999987543
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-51 Score=415.40 Aligned_cols=270 Identities=37% Similarity=0.640 Sum_probs=235.3
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
...+.+.|++.+.||+|+||.||+|.+..+++.||+|++.+... ...+|++++.++.+||||+++++++.+..
T Consensus 17 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~ 89 (342)
T 2qr7_A 17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGK 89 (342)
T ss_dssp --CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred ccCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC
Confidence 34567789999999999999999999999999999999976542 23468889998866999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC-CCCcEEEeeCCCccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD-DDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~-~~~~~kl~DfG~~~~ 252 (564)
.+|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+ ..+.+||+|||++..
T Consensus 90 ~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 90 YVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp EEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 9999999999999999999888999999999999999999999999999999999999985432 224699999999987
Q ss_pred cCCC-CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCC---CCHHHHHHHHHcCCccCCCCCCCC
Q 008475 253 FKPG-QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWA---ETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 253 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~---~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
.... ......+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+ ....+++..+..+...+....+..
T Consensus 170 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 249 (342)
T 2qr7_A 170 LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS 249 (342)
T ss_dssp CBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTT
T ss_pred CcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcccccc
Confidence 6433 34456789999999999985 489999999999999999999999976 456788888998888887777888
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSL 370 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~ 370 (564)
+++++.+||.+||..||.+|||+.++++||||......+...+
T Consensus 250 ~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~~~~~~~~ 292 (342)
T 2qr7_A 250 VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQL 292 (342)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGGGSCCSCC
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCccccccccC
Confidence 9999999999999999999999999999999987544444333
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=417.81 Aligned_cols=268 Identities=33% Similarity=0.581 Sum_probs=239.7
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..+.+.|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++.+. ||||+++++++.+...
T Consensus 47 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~ 122 (387)
T 1kob_A 47 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP---YPLDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYE 122 (387)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSE
T ss_pred CccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc---chhhHHHHHHHHHHHHhCC-CcCCCeEEEEEEeCCE
Confidence 44567899999999999999999999999999999999654 2344567889999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
+++|||||+||+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+.. +..+.+||+|||++...
T Consensus 123 ~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKL 201 (387)
T ss_dssp EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEEC
T ss_pred EEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec-CCCCceEEEecccceec
Confidence 999999999999999887653 6999999999999999999999999999999999999942 23568999999999987
Q ss_pred CCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+......+....+..+++++
T Consensus 202 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 281 (387)
T 1kob_A 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 281 (387)
T ss_dssp CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHH
T ss_pred CCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHH
Confidence 76666667789999999999985 58999999999999999999999999999888999998888777777777899999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPD 367 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~ 367 (564)
.+||.+||..||.+|||+.++|+||||+.......
T Consensus 282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~ 316 (387)
T 1kob_A 282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLT 316 (387)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCTTCC
T ss_pred HHHHHHHcCCChhHCcCHHHHhhCccccCCccccc
Confidence 99999999999999999999999999987654333
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-51 Score=409.60 Aligned_cols=255 Identities=28% Similarity=0.555 Sum_probs=230.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|++..+|+.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+...+|+|
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCC-CCCCceEeEEEEeCCEEEEE
Confidence 45999999999999999999999999999999997643322234567889999999996 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .
T Consensus 85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~Dfg~a~~~~~--~ 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPD--V 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSS--C
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE---cCCCCEEEeecCcceecCC--c
Confidence 9999999999999988899999999999999999999999999999999999999 7788999999999987543 2
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
....+||+.|+|||++.+ .++.++|||||||++|||++|..||.+.+....+..+..+...++ ..+++++.+||.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~ 235 (318)
T 1fot_A 160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLS 235 (318)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHH
T ss_pred cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHH
Confidence 345789999999999985 599999999999999999999999999999899999988766554 358999999999
Q ss_pred HhcccCCCCCC-----CHHHHhcCCCcCCCC
Q 008475 338 KMLCSQPSERL-----TAHEVLCHPWICENG 363 (564)
Q Consensus 338 ~~l~~dp~~R~-----s~~~vl~hp~~~~~~ 363 (564)
+||..||.+|| +++++++||||+...
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~ 266 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 266 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred HHhccCHHHcCCCcCCCHHHHhcCccccCCC
Confidence 99999999999 999999999998643
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-51 Score=417.08 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=231.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|++..+++.||+|++.+.........+.+..|..++..+..||||+++++++.+...+|+|
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 45999999999999999999999999999999997654323344667889999999886699999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~ 257 (564)
|||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ...
T Consensus 100 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---cCCCcEEEEeCCcccccccCCc
Confidence 9999999999999988899999999999999999999999999999999999999 788899999999998643 333
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
.....+||+.|+|||++.+ .|+.++|||||||++|||++|+.||.+.+..+++..+..+...++ ..+++++.+||
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 252 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAIC 252 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHH
Confidence 4556789999999999984 599999999999999999999999999999999999988776654 35899999999
Q ss_pred HHhcccCCCCCCC-----HHHHhcCCCcCCC
Q 008475 337 RKMLCSQPSERLT-----AHEVLCHPWICEN 362 (564)
Q Consensus 337 ~~~l~~dp~~R~s-----~~~vl~hp~~~~~ 362 (564)
.+||..||.+||+ ++++++||||+..
T Consensus 253 ~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 253 KGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp HHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred HHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 9999999999994 6999999999864
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-51 Score=404.90 Aligned_cols=265 Identities=41% Similarity=0.782 Sum_probs=240.8
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
...+.++|++.+.||+|+||.||+|.+..++..||+|++..... ...+.+.+|+.+++++. ||||+++++++.+..
T Consensus 4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 79 (277)
T 3f3z_A 4 KGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLD-HPNIIRLYETFEDNT 79 (277)
T ss_dssp --CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSS
T ss_pred hhhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhCC-CCCEeeEEEEEecCC
Confidence 34567789999999999999999999999999999999976533 23567889999999996 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
..++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+..++.++.+||+|||++...
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 80 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred eEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 99999999999999999988889999999999999999999999999999999999999976667789999999999887
Q ss_pred CCCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
..........||+.|+|||++.+.++.++||||||+++|+|++|..||......+....+..+...++...+..+++.+.
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
T 3f3z_A 160 KPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAE 239 (277)
T ss_dssp CTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHH
T ss_pred cCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHH
Confidence 76666677889999999999988899999999999999999999999999999899988888877766555557899999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+||.+||+.||.+|||+.++|+||||++.
T Consensus 240 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 268 (277)
T 3f3z_A 240 SLIRRLLTKSPKQRITSLQALEHEWFEKQ 268 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence 99999999999999999999999999763
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-51 Score=425.63 Aligned_cols=262 Identities=31% Similarity=0.467 Sum_probs=230.2
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||+||+|++..+++.||+|++.+.........+.+.+|+.+++.+. ||||++++++|.+...+||
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~l 146 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLYM 146 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEEE
Confidence 456999999999999999999999999999999997533212222345778999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||||+||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 147 V~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 147 VMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp EECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTTS
T ss_pred EEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE---CCCCCEEEeccceeEeeccCC
Confidence 9999999999998865 579999999999999999999999999999999999999 788899999999998765443
Q ss_pred --ceecccCCCcccchhhhhhc-----CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 258 --IFTDVVGSPYYVAPEVLLKH-----YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 258 --~~~~~~gt~~y~aPE~~~~~-----~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.....+||+.|+|||++.+. |+.++|||||||++|||++|+.||.+.+..+++..|..+...+..+....+|+
T Consensus 223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~ 302 (410)
T 3v8s_A 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISK 302 (410)
T ss_dssp EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCH
T ss_pred cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccH
Confidence 23467899999999999742 78999999999999999999999999999999999987654444445567999
Q ss_pred HHHHHHHHhcccCCCC--CCCHHHHhcCCCcCCCCC
Q 008475 331 SAKDLIRKMLCSQPSE--RLTAHEVLCHPWICENGV 364 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~--R~s~~~vl~hp~~~~~~~ 364 (564)
++++||.+||..+|.+ ||++++|++||||++..+
T Consensus 303 ~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w 338 (410)
T 3v8s_A 303 EAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW 338 (410)
T ss_dssp HHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSC
T ss_pred HHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCH
Confidence 9999999999999988 999999999999997543
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-51 Score=414.06 Aligned_cols=254 Identities=30% Similarity=0.565 Sum_probs=230.9
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|++..+|+.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+...+|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEEEE
Confidence 56999999999999999999999999999999997654323344667889999999996 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC--
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE---CCCCCEEEcccccceeccCC--
Confidence 9999999999999988899999999999999999999999999999999999999 77889999999999876543
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+++..+..+...++ ..+++++.+||.
T Consensus 195 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~ 270 (350)
T 1rdq_E 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLR 270 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHHHH
T ss_pred cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence 345789999999999985 589999999999999999999999999999999999998876554 358999999999
Q ss_pred HhcccCCCCCCC-----HHHHhcCCCcCCC
Q 008475 338 KMLCSQPSERLT-----AHEVLCHPWICEN 362 (564)
Q Consensus 338 ~~l~~dp~~R~s-----~~~vl~hp~~~~~ 362 (564)
+||+.||.+||+ ++++++||||...
T Consensus 271 ~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 999999999998 9999999999864
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-51 Score=406.65 Aligned_cols=247 Identities=22% Similarity=0.234 Sum_probs=192.0
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC----
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL---- 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---- 173 (564)
..+|.+.+.||+|+||+||+|++ +|+.||||++.... ........|+..+.+++ |||||++++++.+++
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l~-HpNIv~l~g~~~~~~~~~~ 74 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcCC-CCCCCcEEEEEEecCCCce
Confidence 34589999999999999999986 68999999996432 11122334666667786 999999999997653
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCEeecCCCCcEEeecCCCCCcEEEe
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL--------GVMHRDLKPENFLLVNKDDDFSLKAI 245 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~iiH~Dlkp~NIll~~~~~~~~~kl~ 245 (564)
.+|||||||++|+|.+++.. .+++++.+..++.|++.||.|||++ +||||||||+|||+ +.++.+||+
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl---~~~~~~Ki~ 150 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE---CTTSCEEEC
T ss_pred EEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE---CCCCCEEEE
Confidence 68999999999999999975 4689999999999999999999987 99999999999999 788999999
Q ss_pred eCCCccccCCCCc-----eecccCCCcccchhhhhh-------cCCCcchHHHHHHHHHHHHhCCCCCCCC---------
Q 008475 246 DFGLSVFFKPGQI-----FTDVVGSPYYVAPEVLLK-------HYGPEADVWTAGVILYILLSGVPPFWAE--------- 304 (564)
Q Consensus 246 DfG~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~DvwSlG~il~elltg~~pf~~~--------- 304 (564)
|||+|+....... ....+||+.|||||++.+ .|+.++|||||||++|||+||.+||...
T Consensus 151 DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~ 230 (303)
T 3hmm_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred eCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchh
Confidence 9999987654332 234689999999999964 3677999999999999999997765321
Q ss_pred ------CHHHHHHHHHcCCccCCCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 305 ------TQQGIFDAVLKGHIDFESDPW---PLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 305 ------~~~~~~~~i~~~~~~~~~~~~---~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
....+...+.........+.. ..+++.+.+|+.+||+.||++|||+.||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred cccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 123344444443332221110 113357889999999999999999999875
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-50 Score=399.40 Aligned_cols=263 Identities=35% Similarity=0.624 Sum_probs=225.8
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..+.++|.+.+.||+|+||.||+|.+..++..||+|++.... .....+.+.+|+.+++.++ ||||+++++++.+...
T Consensus 18 g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~ 94 (285)
T 3is5_A 18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLD-HPNIIKIFEVFEDYHN 94 (285)
T ss_dssp SCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CCSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE
T ss_pred CChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc--cchhHHHHHHHHHHHHhCC-CchHHhHHHheecCCe
Confidence 356678999999999999999999999999999999997654 2334577889999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 175 VHIVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
.++||||+++++|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 9999999999999998854 367999999999999999999999999999999999999966556688999999999
Q ss_pred cccCCCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.............||+.|+|||++.+.++.++|||||||++|+|++|..||.+....+....+......+... ...+++
T Consensus 175 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 253 (285)
T 3is5_A 175 ELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTP 253 (285)
T ss_dssp CC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC---CCCCH
T ss_pred eecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc-cCcCCH
Confidence 8776655566778999999999998889999999999999999999999999998888777776655444332 234789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
++.+||.+||..||.+|||+.|+|+||||++
T Consensus 254 ~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 254 QAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 9999999999999999999999999999975
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-50 Score=407.35 Aligned_cols=269 Identities=36% Similarity=0.647 Sum_probs=214.5
Q ss_pred cccceeec---ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 97 IRDLYTLG---RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 97 ~~~~y~~~---~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
+.++|.+. +.||+|+||.||+|.+..+++.||||++.+. ....+.+|+.+++.+.+||||+++++++.+..
T Consensus 6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~ 79 (325)
T 3kn6_A 6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL 79 (325)
T ss_dssp HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Confidence 33456664 7899999999999999999999999999643 34567889999999988999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
..|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+....+||+|||++...
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 159 (325)
T 3kn6_A 80 HTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159 (325)
T ss_dssp EEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred EEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence 99999999999999999999889999999999999999999999999999999999999965444558999999999865
Q ss_pred CCC-CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHcCCccCCCCC
Q 008475 254 KPG-QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET-------QQGIFDAVLKGHIDFESDP 324 (564)
Q Consensus 254 ~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~-------~~~~~~~i~~~~~~~~~~~ 324 (564)
... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. ..+++..+..+...+....
T Consensus 160 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (325)
T 3kn6_A 160 PPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEA 239 (325)
T ss_dssp CC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHH
T ss_pred CCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccc
Confidence 433 33456778999999999985 58999999999999999999999997643 3567788888877766665
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCC
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLD 371 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~ 371 (564)
+..+++++++||.+||..||.+|||+.++++||||+.....+..++.
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~~~~~~~ 286 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLM 286 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCCCCSCCS
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccCCCCCCC
Confidence 66789999999999999999999999999999999987655554443
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-51 Score=426.08 Aligned_cols=264 Identities=27% Similarity=0.486 Sum_probs=228.6
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|++.++||+|+||+||+|++..+++.||+|++.+...........+.+|+.++..+. ||||++++++|.+...+|
T Consensus 72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~~ 150 (437)
T 4aw2_A 72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-SKWITTLHYAFQDDNNLY 150 (437)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCEEE
Confidence 3467999999999999999999999999999999997533212222334788999999996 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||||+||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE---cCCCCEEEcchhhhhhccc
Confidence 99999999999999987 5789999999999999999999999999999999999999 7888999999999977654
Q ss_pred CCc--eecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC-CCC
Q 008475 256 GQI--FTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD-PWP 326 (564)
Q Consensus 256 ~~~--~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~ 326 (564)
... ....+||+.|+|||++. +.|+.++|||||||++|||++|+.||.+.+..+.+..|......+..+ .+.
T Consensus 228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 307 (437)
T 4aw2_A 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVT 307 (437)
T ss_dssp TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCC
T ss_pred CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccc
Confidence 332 23468999999999986 358999999999999999999999999999999888887644332222 235
Q ss_pred CCCHHHHHHHHHhcccCCCC--CCCHHHHhcCCCcCCCCC
Q 008475 327 LISDSAKDLIRKMLCSQPSE--RLTAHEVLCHPWICENGV 364 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~--R~s~~~vl~hp~~~~~~~ 364 (564)
.+|+++++||.+||+.+|++ |++++++++||||++..+
T Consensus 308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w 347 (437)
T 4aw2_A 308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDW 347 (437)
T ss_dssp CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCT
T ss_pred cCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCH
Confidence 68999999999999998888 999999999999997654
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=414.91 Aligned_cols=257 Identities=26% Similarity=0.472 Sum_probs=228.8
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|++.+.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++.+. ||||++++++|.+...+|+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEEEE
Confidence 466999999999999999999999999999999997654333445678889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||||.||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 93 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---CCCCCEEEeccceeeeccCCC
Confidence 99999999999999988899999999999999999999999999999999999999 788899999999999877666
Q ss_pred ceecccCCCcccchhhhhh----cCCCcchHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 258 IFTDVVGSPYYVAPEVLLK----HYGPEADVWTAGVILYILLSGVPPFWAE---TQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.....+||+.|+|||++.+ .|+.++|||||||++|+|++|..||... ....+...+......++ ..+++
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p----~~~s~ 245 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SAWSQ 245 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC----TTSCH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC----CcCCH
Confidence 6778899999999999963 4899999999999999999999999753 34455566655544443 45899
Q ss_pred HHHHHHHHhcccCCCCCCC-HHHHhcCCCcCCC
Q 008475 331 SAKDLIRKMLCSQPSERLT-AHEVLCHPWICEN 362 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s-~~~vl~hp~~~~~ 362 (564)
++.+||.+||..||.+||+ ++++++||||...
T Consensus 246 ~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 246 EMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp HHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred HHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 9999999999999999998 9999999999864
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-50 Score=417.96 Aligned_cols=262 Identities=37% Similarity=0.634 Sum_probs=218.8
Q ss_pred ccccceeec-ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec---
Q 008475 96 NIRDLYTLG-RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--- 171 (564)
Q Consensus 96 ~~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 171 (564)
.+.+.|.+. +.||+|+||+||+|.+..+++.||||++... ..+.+|+.++.++.+||||++++++|..
T Consensus 58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~ 129 (400)
T 1nxk_A 58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYA 129 (400)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeeccc
Confidence 344557776 7899999999999999999999999998632 3567899998777679999999999875
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 172 -SLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 172 -~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
..++|||||||+||+|.+++...+ .+++..++.|+.||+.||.|||++||+||||||+|||+...+.++.+||+|||
T Consensus 130 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp TEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred CCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecc
Confidence 677999999999999999997653 59999999999999999999999999999999999999544347899999999
Q ss_pred CccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHcCCccCCCC
Q 008475 249 LSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ----GIFDAVLKGHIDFESD 323 (564)
Q Consensus 249 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~----~~~~~i~~~~~~~~~~ 323 (564)
++............+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.... .....+..+...++..
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~ 289 (400)
T 1nxk_A 210 FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 289 (400)
T ss_dssp TCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTT
T ss_pred cccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCc
Confidence 9987765555667889999999999974 6999999999999999999999999775532 3566777787777777
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 324 ~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
.+..+++++.+||.+||..||.+|||+.++|+||||......
T Consensus 290 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~ 331 (400)
T 1nxk_A 290 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 331 (400)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTTS
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCCC
Confidence 778899999999999999999999999999999999875443
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=416.41 Aligned_cols=257 Identities=36% Similarity=0.621 Sum_probs=224.5
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++ ||||+++++++.+...++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~ 85 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HPHIIKLYDVITTPTDIV 85 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEE
Confidence 3456999999999999999999999999999999997543222223457889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+||||+ +|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 86 lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 86 MVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE---CTTCCEEECCSSCTBTTTTS
T ss_pred EEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE---cCCCCEEEEEeccceeccCC
Confidence 999999 78999999988899999999999999999999999999999999999999 77889999999999887766
Q ss_pred CceecccCCCcccchhhhhhc-C-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLKH-Y-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
......+||+.|+|||++.+. + +.++|||||||++|+|++|..||.+.....+...+..+.... ...+|+++.+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----p~~~s~~~~~ 237 (336)
T 3h4j_B 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM----PDFLSPGAQS 237 (336)
T ss_dssp BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCC----CTTSCHHHHH
T ss_pred cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC----cccCCHHHHH
Confidence 666778899999999999854 3 789999999999999999999998766554444433333222 2458999999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
||.+||..||.+|||++|+++||||+..
T Consensus 238 li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 238 LIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 9999999999999999999999999864
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-50 Score=398.41 Aligned_cols=259 Identities=30% Similarity=0.456 Sum_probs=224.6
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...++|++.+.||+|+||.||+|.+..+++.||+|++...... ..+.+.+|+.+++.+. ||||+++++++.....+
T Consensus 17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~ 92 (297)
T 3fxz_A 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENK-NPNIVNYLDSYLVGDEL 92 (297)
T ss_dssp CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc---HHHHHHHHHHHHhcCC-CCCCCeEeEEEEECCEE
Confidence 3556799999999999999999999999999999998755432 2456889999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|+|||||+|++|.+++... .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 93 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 93 WVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE---CCCCCEEEeeCCCceecCC
Confidence 9999999999999988664 69999999999999999999999999999999999999 7778999999999887654
Q ss_pred CC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 GQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+....... ......+++.+.
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 247 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE-LQNPEKLSAIFR 247 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC-CSCGGGSCHHHH
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-CCCccccCHHHH
Confidence 32 3445789999999999985 59999999999999999999999999888776666554432221 122346899999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+||.+||..||.+|||+.++|+||||+...
T Consensus 248 ~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 277 (297)
T 3fxz_A 248 DFLNRCLEMDVEKRGSAKELLQHQFLKIAK 277 (297)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHccCChhHCcCHHHHhhChhhcccC
Confidence 999999999999999999999999998643
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-50 Score=413.01 Aligned_cols=259 Identities=37% Similarity=0.655 Sum_probs=226.8
Q ss_pred ccceee--cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 98 RDLYTL--GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 98 ~~~y~~--~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...|.+ .+.||+|+||.||+|.+..+|+.||+|++... .....+.+.+|+.++++++ ||||+++++++.+...+
T Consensus 86 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 161 (373)
T 2x4f_A 86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR---GMKDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDI 161 (373)
T ss_dssp GGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEE
T ss_pred ccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc---ccccHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEE
Confidence 334555 67899999999999999999999999999754 2345678899999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+||||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+.. +..+.+||+|||++....
T Consensus 162 ~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp EEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE-TTTTEEEECCCSSCEECC
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec-CCCCcEEEEeCCCceecC
Confidence 9999999999999988654 46999999999999999999999999999999999999954 345789999999999877
Q ss_pred CCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+......++...+..+++++.
T Consensus 241 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 320 (373)
T 2x4f_A 241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAK 320 (373)
T ss_dssp TTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHH
T ss_pred CccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHH
Confidence 6666666789999999999974 588999999999999999999999999999999999988877766666678999999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+||.+||..||.+|||+.++|+||||..
T Consensus 321 ~li~~~L~~dp~~Rps~~e~l~hp~~~~ 348 (373)
T 2x4f_A 321 EFISKLLIKEKSWRISASEALKHPWLSD 348 (373)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred HHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence 9999999999999999999999999976
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-50 Score=403.01 Aligned_cols=266 Identities=34% Similarity=0.588 Sum_probs=222.0
Q ss_pred cccccceeec-ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 95 DNIRDLYTLG-RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 95 ~~~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
..+.+.|++. +.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.+++++.+||||+++++++.+..
T Consensus 8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~ 84 (316)
T 2ac3_A 8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED 84 (316)
T ss_dssp CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 3466779995 78999999999999999999999999997543 2345678899999999766999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.+|+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+..++....+||+|||++...
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 85 RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred EEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 99999999999999999998889999999999999999999999999999999999999954333345999999998765
Q ss_pred CCC--------CceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCC--------------
Q 008475 254 KPG--------QIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAET-------------- 305 (564)
Q Consensus 254 ~~~--------~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~-------------- 305 (564)
... ......+||+.|+|||++. ..++.++|||||||++|+|++|..||.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 321 1223456999999999986 348999999999999999999999997754
Q ss_pred -HHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 306 -QQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 306 -~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
...+...+..+...++...+..+++++++||.+||..||.+|||+.++|+||||+...
T Consensus 245 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp HHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred HHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 2446677777766665444456899999999999999999999999999999998743
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-50 Score=418.62 Aligned_cols=264 Identities=27% Similarity=0.482 Sum_probs=227.7
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|++.+.||+|+||.||+|+++.+|+.||+|++.+.........+.+.+|+.++..+. ||||+++++++.+...+|
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~~ 137 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD-RRWITQLHFAFQDENYLY 137 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEeeCCEEE
Confidence 3467999999999999999999999999999999997543323334456889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||||+||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 138 lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---d~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp EEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee---cCCCCEEEeechhheeccC
Confidence 9999999999999998754 79999999999999999999999999999999999999 7888999999999987654
Q ss_pred CCc--eecccCCCcccchhhhhh--------cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC-C
Q 008475 256 GQI--FTDVVGSPYYVAPEVLLK--------HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD-P 324 (564)
Q Consensus 256 ~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~-~ 324 (564)
... ....+||+.|+|||++.+ .|+.++|||||||++|||++|+.||.+.+..+++..|......+..+ .
T Consensus 215 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 294 (412)
T 2vd5_A 215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLV 294 (412)
T ss_dssp TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC--
T ss_pred CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCcc
Confidence 432 234689999999999972 58999999999999999999999999999988888887643222222 1
Q ss_pred CCCCCHHHHHHHHHhcccCCCCC---CCHHHHhcCCCcCCCCCC
Q 008475 325 WPLISDSAKDLIRKMLCSQPSER---LTAHEVLCHPWICENGVA 365 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R---~s~~~vl~hp~~~~~~~~ 365 (564)
...+|+++++||.+||. +|.+| |+++++++||||+...+.
T Consensus 295 ~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~ 337 (412)
T 2vd5_A 295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWD 337 (412)
T ss_dssp --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCST
T ss_pred ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHH
Confidence 24689999999999999 99998 599999999999976543
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-50 Score=412.06 Aligned_cols=257 Identities=28% Similarity=0.507 Sum_probs=221.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHH-HhhcCCCCccEEEEEEecCCeEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIM-HHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
++|++.+.||+|+||.||+|+++.+++.||+|++.+...........+..|..++ +.+. ||||+++++++.+...+|+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~-hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCC-CTTBCCEEEEEECSSEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEeCCEEEE
Confidence 4599999999999999999999999999999999877665555566777888774 5565 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~ 256 (564)
||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ..
T Consensus 117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEeeCccccccccCC
Confidence 99999999999999988899999999999999999999999999999999999999 788899999999998633 33
Q ss_pred CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
......+||+.|+|||++.+ .|+.++|||||||++|||++|..||.+.+..+++..+..+...++ +.+++++++|
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~l 269 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHL 269 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCC----SSSCHHHHHH
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC----CCCCHHHHHH
Confidence 44566889999999999985 599999999999999999999999999999999999988765544 4589999999
Q ss_pred HHHhcccCCCCCCCH----HHHhcCCCcCCCC
Q 008475 336 IRKMLCSQPSERLTA----HEVLCHPWICENG 363 (564)
Q Consensus 336 i~~~l~~dp~~R~s~----~~vl~hp~~~~~~ 363 (564)
|.+||+.||.+||++ .++++||||+...
T Consensus 270 i~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~ 301 (373)
T 2r5t_A 270 LEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN 301 (373)
T ss_dssp HHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred HHHHcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence 999999999999986 6999999998643
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-50 Score=406.04 Aligned_cols=272 Identities=28% Similarity=0.519 Sum_probs=236.6
Q ss_pred ccccccccceeec-ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 92 HKTDNIRDLYTLG-RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 92 ~~~~~~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
...+.+.++|.+. +.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.+..||||+++++++.
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 3456678889998 899999999999999999999999999976543 33446678899999999987899999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
+...+++||||+++++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||+......+.+||+|||
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 999999999999999999988543 679999999999999999999999999999999999999543337899999999
Q ss_pred CccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 249 LSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 249 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......+....+..
T Consensus 180 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 259 (327)
T 3lm5_A 180 MSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSS 259 (327)
T ss_dssp GCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTT
T ss_pred cccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcc
Confidence 9988766555566789999999999984 589999999999999999999999999999888888888877777777788
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+++.+.+||.+||..||.+|||++++|+||||+....
T Consensus 260 ~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~ 296 (327)
T 3lm5_A 260 VSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF 296 (327)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence 9999999999999999999999999999999987654
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-50 Score=403.01 Aligned_cols=263 Identities=39% Similarity=0.689 Sum_probs=235.0
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH---HhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR---EDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..+.+.|++.+.||+|+||.||+|.+..+|+.||+|++........ ...+.+.+|+.+++++. ||||+++++++.+
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 86 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVITLHDVYEN 86 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEEC
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCC-CCCcceEEEEEec
Confidence 3466789999999999999999999999999999999976543221 23567899999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCC----cEEEeeC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF----SLKAIDF 247 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~----~~kl~Df 247 (564)
...+++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++ .+||+||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~---~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML---LDKNIPIPHIKLIDF 163 (321)
T ss_dssp SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---SCTTSSSCCEEECCC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEE---ecCCCCcCCEEEccC
Confidence 99999999999999999999888889999999999999999999999999999999999999 4444 7999999
Q ss_pred CCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 248 GLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 248 G~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
|++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++...+.
T Consensus 164 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 243 (321)
T 2a2a_A 164 GLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243 (321)
T ss_dssp TTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHT
T ss_pred ccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhc
Confidence 99988766655567789999999999984 58999999999999999999999999999988888888876665544445
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.+++.+.+||.+||..||.+|||+.++|+||||..
T Consensus 244 ~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~ 278 (321)
T 2a2a_A 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278 (321)
T ss_dssp TCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence 68999999999999999999999999999999975
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=394.19 Aligned_cols=258 Identities=26% Similarity=0.434 Sum_probs=217.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||+||+|.+..+++.||+|++..... .......+.+|+.++++++ ||||+++++++.++..+++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCC-CCCEeeEEeEEEeCCEEEEE
Confidence 469999999999999999999999999999999976543 3445577889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|||+++ +|.+.+.. .+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 80 ~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCSCC
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecCCcc
Confidence 999965 56565544 6789999999999999999999999999999999999999 77889999999999876432
Q ss_pred CceecccCCCcccchhhhhh-c-CCCcchHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHcCCccCCC-----------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-H-YGPEADVWTAGVILYILLSGVPP-FWAETQQGIFDAVLKGHIDFES----------- 322 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~-~~~~~DvwSlG~il~elltg~~p-f~~~~~~~~~~~i~~~~~~~~~----------- 322 (564)
.......||+.|+|||++.+ . ++.++|||||||++|+|++|..| |.+.+..+.+..+.+.......
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 34455688999999999975 3 89999999999999999988877 5556666666665432111111
Q ss_pred --------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 323 --------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 323 --------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
...+.+++++++||.+||+.||++|||++|+|+||||++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence 1123478999999999999999999999999999999864
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-50 Score=421.76 Aligned_cols=257 Identities=31% Similarity=0.527 Sum_probs=221.0
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+++.++ ||||+++++++.+...+||
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCS-CTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCC-CCeEeeEEEEEeeCCEEEE
Confidence 467999999999999999999999999999999997654444555667889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-C
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-P 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~ 255 (564)
|||||++|+|.+++...+.+++..+..++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||++.... .
T Consensus 226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE---CSSSCEEECCCCCCCTTCC-
T ss_pred EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE---CCCCCEEEccCCCceeccCC
Confidence 99999999999999988899999999999999999999998 999999999999999 778899999999998643 3
Q ss_pred CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
.......+||+.|+|||++.+ .|+.++|||||||++|||++|+.||.+.+...+...+......++ ..+++++.+
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ 378 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLGPEAKS 378 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHH
Confidence 334556889999999999974 599999999999999999999999999999999988888766554 358999999
Q ss_pred HHHHhcccCCCCCC-----CHHHHhcCCCcCCC
Q 008475 335 LIRKMLCSQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 335 li~~~l~~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
||.+||..||.+|| +++++++||||...
T Consensus 379 li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 99999999999999 99999999999874
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=398.76 Aligned_cols=263 Identities=26% Similarity=0.450 Sum_probs=217.3
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
.+.+.++|++.+.||+|+||+||+|++. +++.||+|++..... .......+.+|+.++++++ ||||+++++++.+..
T Consensus 16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 92 (311)
T 3niz_A 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAE-DEGIPSTAIREISLLKELH-HPNIVSLIDVIHSER 92 (311)
T ss_dssp EECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHCC-CTTBCCEEEEECCSS
T ss_pred ecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcC-CCCEeeeeeEEccCC
Confidence 4456788999999999999999999985 589999999965432 3334567889999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 174 CVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
.+++||||++ ++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 93 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 93 CLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARA 168 (311)
T ss_dssp CEEEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEE
T ss_pred EEEEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE---CCCCCEEEccCcCcee
Confidence 9999999996 5888877664 459999999999999999999999999999999999999 7778999999999987
Q ss_pred cCCC-CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC------
Q 008475 253 FKPG-QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD------ 323 (564)
Q Consensus 253 ~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~------ 323 (564)
.... .......+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+..........
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp TTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGT
T ss_pred cCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhh
Confidence 6432 33455688999999999874 48999999999999999999999998877766665554311111100
Q ss_pred --------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 324 --------------------PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 324 --------------------~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
..+.+++++.+||.+||++||.+|||+.|+|+||||++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 1134788999999999999999999999999999998743
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-50 Score=422.59 Aligned_cols=259 Identities=36% Similarity=0.598 Sum_probs=233.3
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|.+.+.||+|+||.||+|++..+|+.||||++.+...........+.+|+.+++.++ ||||+++++++.+...+|
T Consensus 14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~ 92 (476)
T 2y94_A 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HPHIIKLYQVISTPSDIF 92 (476)
T ss_dssp EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEE
T ss_pred eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 3456999999999999999999999999999999997543322234567899999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 93 lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll---~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 93 MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE---CTTCCEEECCCSSCEECCTT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE---ecCCCeEEEeccchhhcccc
Confidence 999999999999999888889999999999999999999999999999999999999 77889999999999987766
Q ss_pred CceecccCCCcccchhhhhhc--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLKH--YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
......+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.....+...+..+....+ ..+++++.+
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 245 (476)
T 2y94_A 170 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP----QYLNPSVIS 245 (476)
T ss_dssp CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC----TTCCHHHHH
T ss_pred ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC----ccCCHHHHH
Confidence 666778999999999999864 36799999999999999999999999888888888888765443 358899999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
||.+||..||.+|||+.++++||||+...
T Consensus 246 Li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 274 (476)
T 2y94_A 246 LLKHMLQVDPMKRATIKDIREHEWFKQDL 274 (476)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred HHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence 99999999999999999999999998753
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=408.15 Aligned_cols=264 Identities=37% Similarity=0.668 Sum_probs=236.2
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC-C----HHhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI-S----REDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~-~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
..+.++|++.+.||+|+||.||+|.+..+|+.||||++...... . ....+.+.+|+.+++.+.+||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 34557799999999999999999999999999999998654321 1 123456889999999996699999999999
Q ss_pred ecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 170 EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
......|+||||++|++|.+++.....+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~---~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGF 246 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEEecCc
Confidence 9999999999999999999999888889999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-------cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-------HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES 322 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 322 (564)
+............+||+.|+|||++.+ .++.++|||||||++|+|++|..||........+..+..+...+..
T Consensus 247 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 326 (365)
T 2y7j_A 247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS 326 (365)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH
T ss_pred ccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC
Confidence 988776666677889999999999863 3788999999999999999999999999888888888888776665
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 323 ~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+.+..+++.+.+||.+||..||.+|||+.++|+||||++
T Consensus 327 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 555678999999999999999999999999999999963
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=396.63 Aligned_cols=265 Identities=41% Similarity=0.722 Sum_probs=235.3
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..+.++|.+.+.||+|+||.||+|++..+|+.||+|++.... ....+.+.+|+.+++.+. ||||+++++++.+...
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 80 (304)
T 2jam_A 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP---AFRDSSLENEIAVLKKIK-HENIVTLEDIYESTTH 80 (304)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc---ccchHHHHHHHHHHHhCC-CCCeeehhhhcccCCE
Confidence 456778999999999999999999999999999999997543 223456889999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
.|+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+|||++....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 81 YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred EEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 99999999999999999888899999999999999999999999999999999999999655677899999999997644
Q ss_pred CCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.......+...+..+...++.+.+..+++++.
T Consensus 161 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (304)
T 2jam_A 161 NG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAK 239 (304)
T ss_dssp CB-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHH
T ss_pred CC-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHH
Confidence 32 3345678999999999975 589999999999999999999999999999999999998887777776778999999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+||.+||..||.+|||+.++|+||||.....
T Consensus 240 ~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (304)
T 2jam_A 240 DFICHLLEKDPNERYTCEKALSHPWIDGNTA 270 (304)
T ss_dssp HHHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred HHHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence 9999999999999999999999999987543
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=396.23 Aligned_cols=265 Identities=25% Similarity=0.371 Sum_probs=217.6
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC--CHHhHHHHHHHHHHHHhhc--CCCCccEEEEEEe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI--SREDVEDVRREIQIMHHLA--GHKNIVTIKGAYE 170 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~ 170 (564)
..+.++|++.+.||+|+||.||+|++..+++.||+|++...... .......+.+|+.+++.+. +||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 34567899999999999999999999999999999998744321 1112245667887777765 4999999999998
Q ss_pred cCC-----eEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEE
Q 008475 171 DSL-----CVHIVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLK 243 (564)
Q Consensus 171 ~~~-----~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~k 243 (564)
... .+++||||+. ++|.+++..... +++..++.++.||+.||.|||++||+||||||+|||+ +.++.+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~---~~~~~~k 160 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVK 160 (308)
T ss_dssp ECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE---CTTSCEE
T ss_pred ccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEE
Confidence 755 5899999996 699999987654 9999999999999999999999999999999999999 7778999
Q ss_pred EeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC
Q 008475 244 AIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES 322 (564)
Q Consensus 244 l~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 322 (564)
|+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+.......+.
T Consensus 161 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 161 LADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp ECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred EeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999999987766666667889999999999974 6999999999999999999999999999888877776543221111
Q ss_pred CC-----------------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 323 DP-----------------------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 323 ~~-----------------------~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.. .+.+++.+.+||.+||++||.+|||+.|+|+||||++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 11 135789999999999999999999999999999998743
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-49 Score=398.66 Aligned_cols=257 Identities=30% Similarity=0.537 Sum_probs=218.0
Q ss_pred ccceeecccccccCCeEEEEEEEc---cCCcEEEEEEeccccCC-CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLI-SREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
.++|++.+.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.+++.++ ||||+++++++....
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFIVDLIYAFQTGG 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCC-CCCccceeEEEEcCC
Confidence 456999999999999999999985 68999999999765432 2234556789999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.+|+|||||+|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKES 171 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTSCEEECCCSCC---
T ss_pred EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE---CCCCcEEEEeCCccccc
Confidence 999999999999999999988899999999999999999999999999999999999999 77889999999998764
Q ss_pred CC-CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 254 KP-GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 254 ~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.. .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+.++...++ +.++++
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~ 247 (327)
T 3a62_A 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQE 247 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC----TTSCHH
T ss_pred ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHH
Confidence 32 233456789999999999975 589999999999999999999999999999888888888765544 358999
Q ss_pred HHHHHHHhcccCCCCCC-----CHHHHhcCCCcCCC
Q 008475 332 AKDLIRKMLCSQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
+.+||.+||..||.+|| ++.++++||||+..
T Consensus 248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred HHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 99999999999999999 88999999999864
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-49 Score=390.72 Aligned_cols=266 Identities=38% Similarity=0.675 Sum_probs=238.0
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC--C----HHhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI--S----REDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~--~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||||++...... . ....+.+.+|+.+++++.+||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 4567799999999999999999999999999999999754321 1 233567889999999997799999999999
Q ss_pred ecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 170 EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
......++||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---cCCCcEEEecccc
Confidence 9999999999999999999999888889999999999999999999999999999999999999 7778999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-------cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-------HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES 322 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 322 (564)
+.............+++.|+|||++.+ .++.++||||||+++|+|++|..||...........+..+...++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCc
Confidence 988776666667789999999999852 4788999999999999999999999999988888888888877776
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 323 ~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+.+..+++.+.+||.+||..||.+|||+.++|+||||++...
T Consensus 251 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 292 (298)
T 1phk_A 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV 292 (298)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC-
T ss_pred ccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccc
Confidence 666778999999999999999999999999999999987543
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-49 Score=408.85 Aligned_cols=262 Identities=30% Similarity=0.462 Sum_probs=212.7
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL- 173 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 173 (564)
..+.++|++.+.||+|+||.||+|.+..+|+.||||++.+. .......+.+.+|+.+++.+.+||||+++++++....
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 34567799999999999999999999999999999999643 3356667788899999999988999999999997543
Q ss_pred -eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 174 -CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
.+|+|||||+ ++|...+.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRS 158 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEE
T ss_pred CEEEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE---cCCCCEEecCCccccc
Confidence 7999999996 689888765 579999999999999999999999999999999999999 7788999999999976
Q ss_pred cCC----------------------CCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH
Q 008475 253 FKP----------------------GQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQG 308 (564)
Q Consensus 253 ~~~----------------------~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~ 308 (564)
... ....+..+||+.|+|||++.+ .|+.++|||||||++|||++|++||.+.+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 532 122345789999999999975 58999999999999999999999999988877
Q ss_pred HHHHHHcCCccCC-------------------------------------------CCCCCCCCHHHHHHHHHhcccCCC
Q 008475 309 IFDAVLKGHIDFE-------------------------------------------SDPWPLISDSAKDLIRKMLCSQPS 345 (564)
Q Consensus 309 ~~~~i~~~~~~~~-------------------------------------------~~~~~~~s~~~~~li~~~l~~dp~ 345 (564)
.+..+........ ..+...+++++.+||.+||..||.
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 7766643110000 001225789999999999999999
Q ss_pred CCCCHHHHhcCCCcCCC
Q 008475 346 ERLTAHEVLCHPWICEN 362 (564)
Q Consensus 346 ~R~s~~~vl~hp~~~~~ 362 (564)
+|||+.|+|+||||+..
T Consensus 319 ~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 319 KRISANDALKHPFVSIF 335 (388)
T ss_dssp GSCCHHHHTTSTTTTTT
T ss_pred cCCCHHHHhCCHHHHHh
Confidence 99999999999999864
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=391.78 Aligned_cols=260 Identities=33% Similarity=0.598 Sum_probs=227.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|.+..++..||+|++.............+.+|+.+++.+. ||||+++++++.+....++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCC-CCCCcchhheEecCCEEEEE
Confidence 56999999999999999999999999999999996544323334567889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|||+++++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...... .
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l~Dfg~~~~~~~~-~ 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSS-R 163 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE---CTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE---cCCCCEEEEeccccccCCcc-c
Confidence 9999999999999888899999999999999999999999999999999999999 77889999999998664433 3
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
.....|++.|+|||++.+ .++.++||||||+++|+|++|..||......+....+......++ ..+++.+.+||.
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~ 239 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 239 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHHHH
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC----CcCCHHHHHHHH
Confidence 345688999999999985 488999999999999999999999999998888888877655543 358899999999
Q ss_pred HhcccCCCCCCCHHHHhcCCCcCCCCCCCC
Q 008475 338 KMLCSQPSERLTAHEVLCHPWICENGVAPD 367 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~ 367 (564)
+||..||.+|||+.++|+||||+.....+.
T Consensus 240 ~~l~~~p~~Rps~~e~l~h~~~~~~~~~~~ 269 (279)
T 3fdn_A 240 RLLKHNPSQRPMLREVLEHPWITANSSKPS 269 (279)
T ss_dssp HHCCSSGGGSCCHHHHHHCHHHHHHCSSCC
T ss_pred HHhccChhhCCCHHHHhhCccccCCccCcc
Confidence 999999999999999999999997654443
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=392.25 Aligned_cols=257 Identities=28% Similarity=0.432 Sum_probs=213.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|++ .+++.||+|++..... .....+.+.+|+.+++.++ ||||+++++++.+...+++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLV 78 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhcC-CCCEeeeeeEEccCCeEEEE
Confidence 4699999999999999999998 6789999999965432 2233467889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|||+++ +|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 79 FEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp EECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC--
T ss_pred EEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEeECccccccCccc
Confidence 999964 898888764 679999999999999999999999999999999999999 77889999999999765432
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC------------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES------------ 322 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~------------ 322 (564)
.......+|+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+.+.......
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 23445678999999999974 4899999999999999999999999998877766665431110000
Q ss_pred -------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 323 -------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 323 -------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.....+++++.+||.+||..||++|||+.++|+||||++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 0123578999999999999999999999999999999863
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-49 Score=399.58 Aligned_cols=259 Identities=29% Similarity=0.517 Sum_probs=218.8
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ....+.+.+|+.+++.+. ||||+++++++.+....|
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~ 81 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQY 81 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEE
Confidence 45679999999999999999999999999999999965432 223456889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+|||||++++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEET
T ss_pred EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE---eCCCCEEEEEeeccceeccC
Confidence 999999999999999888889999999999999999999999999999999999999 77789999999999765322
Q ss_pred ---CceecccCCCcccchhhhhhc--CCCcchHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCccCCCCCCCCCCH
Q 008475 257 ---QIFTDVVGSPYYVAPEVLLKH--YGPEADVWTAGVILYILLSGVPPFWAETQQ-GIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 257 ---~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
......+||+.|+|||++.+. ++.++|||||||++|+|++|..||...... ............ ...+..+++
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--LNPWKKIDS 236 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT--STTGGGSCH
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc--CCccccCCH
Confidence 223457899999999999753 477899999999999999999999876543 223333332222 223456899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.+.+||.+||..||.+|||+.|+++||||....
T Consensus 237 ~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 237 APLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 999999999999999999999999999998654
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-49 Score=399.79 Aligned_cols=265 Identities=28% Similarity=0.443 Sum_probs=214.8
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|++.+.||+|+||.||+|.+..+++.||||++..... .....+.+.+|+.++++++ ||||+++++++.+...+|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQ-HRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCC-CTTBCCEEEEEEETTEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcC-CCCcceEEEEEecCCEEE
Confidence 34569999999999999999999999999999999975432 3334566789999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC--CCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK--DDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~--~~~~~~kl~DfG~~~~~~ 254 (564)
|||||++ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+||+|||++....
T Consensus 110 lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred EEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9999996 5999999998899999999999999999999999999999999999999532 244569999999998654
Q ss_pred CC-CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCC------
Q 008475 255 PG-QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW------ 325 (564)
Q Consensus 255 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~------ 325 (564)
.. ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+...........+
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL 268 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence 32 33455678999999999975 4899999999999999999999999998887777666543211111111
Q ss_pred --------------------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 326 --------------------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 326 --------------------~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
..+++++.+||.+||..||.+|||+.|+|+||||+....
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 327 (329)
T 3gbz_A 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF 327 (329)
T ss_dssp TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence 016789999999999999999999999999999998654
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-50 Score=426.57 Aligned_cols=258 Identities=32% Similarity=0.519 Sum_probs=227.5
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|++.+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+.+|+.+. ||||+++++++.+...+|
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALC 260 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcC-CCCEeeEEEEEeeCCEEE
Confidence 3466999999999999999999999999999999997654323334567889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+|||||+||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl---d~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEECC
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE---eCCCCeEEEecccceecc
Confidence 9999999999999987654 39999999999999999999999999999999999999 788899999999999877
Q ss_pred CCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHcCCccCCCCCCCCCC
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET----QQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
........+||+.|+|||++.+ .|+.++|||||||++|||++|..||.+.. ...+...+......++ ..+|
T Consensus 338 ~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p----~~~s 413 (576)
T 2acx_A 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS----ERFS 413 (576)
T ss_dssp TTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC----TTSC
T ss_pred cCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC----ccCC
Confidence 6666677899999999999985 59999999999999999999999998753 3455666655544333 4689
Q ss_pred HHHHHHHHHhcccCCCCCC-----CHHHHhcCCCcCCC
Q 008475 330 DSAKDLIRKMLCSQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
+++++||.+||..||.+|| ++++|++||||+..
T Consensus 414 ~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 9999999999999999999 89999999999874
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-49 Score=394.10 Aligned_cols=255 Identities=33% Similarity=0.556 Sum_probs=217.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC-----------------------HHhHHHHHHHHHHHHh
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS-----------------------REDVEDVRREIQIMHH 155 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~~ 155 (564)
++|++.+.||+|+||.||+|.+..+++.||||++....... ....+.+.+|+.++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 56999999999999999999999999999999997654211 1224568899999999
Q ss_pred hcCCCCccEEEEEEec--CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEe
Q 008475 156 LAGHKNIVTIKGAYED--SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLL 233 (564)
Q Consensus 156 l~~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll 233 (564)
++ ||||+++++++.+ ...+|+||||+++++|.+++ ..+.+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 93 l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 170 (298)
T 2zv2_A 93 LD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV 170 (298)
T ss_dssp CC-CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred CC-CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence 97 9999999999986 67899999999999998754 34579999999999999999999999999999999999999
Q ss_pred ecCCCCCcEEEeeCCCccccCCC-CceecccCCCcccchhhhhhc----CCCcchHHHHHHHHHHHHhCCCCCCCCCHHH
Q 008475 234 VNKDDDFSLKAIDFGLSVFFKPG-QIFTDVVGSPYYVAPEVLLKH----YGPEADVWTAGVILYILLSGVPPFWAETQQG 308 (564)
Q Consensus 234 ~~~~~~~~~kl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~----~~~~~DvwSlG~il~elltg~~pf~~~~~~~ 308 (564)
+.++.+||+|||++...... .......||+.|+|||++.+. ++.++|||||||++|+|++|..||.......
T Consensus 171 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 247 (298)
T 2zv2_A 171 ---GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247 (298)
T ss_dssp ---CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence 77889999999999876543 234567899999999999743 4778999999999999999999999988887
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
....+......++. .+.+++++.+||.+||..||.+|||+.++|+||||+
T Consensus 248 ~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 248 LHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 77777776555443 356899999999999999999999999999999996
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-49 Score=434.75 Aligned_cols=258 Identities=26% Similarity=0.431 Sum_probs=233.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|++..+++.||||++.+.........+.+..|..++..+..||+|+++++++++...+|||
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 56999999999999999999999999999999997643323344567889999999987799999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC-CCC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~-~~~ 257 (564)
|||++||+|..++...+.+++..++.|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ...
T Consensus 421 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE---CSSSCEEECCCTTCEECCCTTC
T ss_pred EeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE---cCCCcEEEeecceeeccccCCc
Confidence 9999999999999988899999999999999999999999999999999999999 788899999999998643 334
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
.....+||+.|+|||++.+ .|+.++|||||||++|||++|.+||.+.+..+++..|..+...++ ..+++++.+||
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 573 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAIC 573 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCC----TTSCHHHHHHH
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHH
Confidence 4567889999999999984 699999999999999999999999999999999999998877665 35899999999
Q ss_pred HHhcccCCCCCCCH-----HHHhcCCCcCCCC
Q 008475 337 RKMLCSQPSERLTA-----HEVLCHPWICENG 363 (564)
Q Consensus 337 ~~~l~~dp~~R~s~-----~~vl~hp~~~~~~ 363 (564)
.+||..||.+||++ ++|++||||+...
T Consensus 574 ~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~ 605 (674)
T 3pfq_A 574 KGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 605 (674)
T ss_dssp HHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred HHHccCCHHHCCCCCCCcHHHHhcCccccCCC
Confidence 99999999999997 9999999998753
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-49 Score=395.88 Aligned_cols=259 Identities=26% Similarity=0.413 Sum_probs=208.0
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+.+|+.+++.++ ||||+++++++.+...+|+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELK-HENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCC-BTTBCCEEEEECCTTEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcC-CCCcceEEEEEEECCeEEEE
Confidence 46999999999999999999999999999999997543 2233456789999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 179 MELCAGGELFDRIIQR------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
|||++ ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE---cCCCCEEECcCcccee
Confidence 99997 5999988654 358999999999999999999999999999999999999 7788999999999987
Q ss_pred cCCC-CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC-------
Q 008475 253 FKPG-QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES------- 322 (564)
Q Consensus 253 ~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~------- 322 (564)
.... .......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.+.......
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 6432 33455688999999999975 4899999999999999999999999998887777766442110000
Q ss_pred -----------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 323 -----------------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 323 -----------------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
.....+++++.+||.+||+.||.+|||+.|+|+||||++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 011247889999999999999999999999999999997543
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-49 Score=392.69 Aligned_cols=266 Identities=43% Similarity=0.738 Sum_probs=239.0
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+.+.++|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++.+...
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 95 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSS 95 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB-SSSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcc-CCCccEEEEEEeCCCe
Confidence 3466789999999999999999999999999999999975443 2334677889999999996 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
.++||||+++++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+||++..++..+.+||+|||++....
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999999999888899999999999999999999999999999999999999655555689999999998766
Q ss_pred CCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
.........+++.|+|||++.+.++.++||||||+++|+|++|..||.+.+..++...+..+...+..+.+..+++++.+
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (287)
T 2wei_A 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255 (287)
T ss_dssp CCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHH
T ss_pred CCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHH
Confidence 55545556788999999999988999999999999999999999999999988888888888777666666778999999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
||.+||..||.+|||+.++|+||||++.
T Consensus 256 li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 256 LIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 9999999999999999999999999753
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-49 Score=406.45 Aligned_cols=260 Identities=20% Similarity=0.266 Sum_probs=217.8
Q ss_pred cceeeccccccc--CCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 99 DLYTLGRKLGQG--QFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 99 ~~y~~~~~lG~G--~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
++|++.+.||+| +||.||+|++..+++.||||++..... .....+.+.+|+.+++.++ ||||+++++++.+...+|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCC-CCCCCcEeEEEEECCEEE
Confidence 569999999999 999999999999999999999976543 4566778899999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+|||||++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll---~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccccceeec
Confidence 999999999999999775 679999999999999999999999999999999999999 778899999999876542
Q ss_pred CC--------CceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC---
Q 008475 255 PG--------QIFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF--- 320 (564)
Q Consensus 255 ~~--------~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~--- 320 (564)
.. ......+||+.|+|||++.+ .|+.++|||||||++|+|++|+.||.+.+....+..+..+....
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 259 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccc
Confidence 21 11223478999999999975 58999999999999999999999998766555444333222110
Q ss_pred ---------------------------------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 321 ---------------------------------------ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 321 ---------------------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
..+....+++++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~ 339 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence 01123457899999999999999999999999999999987
Q ss_pred CC
Q 008475 362 NG 363 (564)
Q Consensus 362 ~~ 363 (564)
..
T Consensus 340 ~~ 341 (389)
T 3gni_B 340 IK 341 (389)
T ss_dssp C-
T ss_pred Hh
Confidence 54
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-49 Score=416.72 Aligned_cols=262 Identities=27% Similarity=0.416 Sum_probs=202.4
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec----
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED---- 171 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---- 171 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.+. .......+++.+|+.+|++++ ||||+++++++..
T Consensus 50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 127 (458)
T 3rp9_A 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLN-HDHVVKVLDIVIPKDVE 127 (458)
T ss_dssp CSCTTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTT
T ss_pred ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhCC-CCCCCceEEEEecCCcc
Confidence 3457799999999999999999999999999999999653 335666788999999999997 9999999999843
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 172 -SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 172 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
...+|+||||+ +++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 128 ~~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl---~~~~~~kl~DFGla 203 (458)
T 3rp9_A 128 KFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLA 203 (458)
T ss_dssp TCCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred cCceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE---CCCCCEeecccccc
Confidence 36799999998 67999999888889999999999999999999999999999999999999 77889999999999
Q ss_pred cccCCC----------------------------CceecccCCCcccchhhhh--hcCCCcchHHHHHHHHHHHHh----
Q 008475 251 VFFKPG----------------------------QIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLS---- 296 (564)
Q Consensus 251 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~ellt---- 296 (564)
+..... ...+..+||+.|+|||++. ..|+.++|||||||++|||++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~ 283 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence 875422 1234568899999999875 359999999999999999999
Q ss_pred -------CCCCCCCCCH--------------------HHHHHHHHc--CC-------------------------ccCCC
Q 008475 297 -------GVPPFWAETQ--------------------QGIFDAVLK--GH-------------------------IDFES 322 (564)
Q Consensus 297 -------g~~pf~~~~~--------------------~~~~~~i~~--~~-------------------------~~~~~ 322 (564)
|.+||.+... .+.+..|.. |. .....
T Consensus 284 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (458)
T 3rp9_A 284 NVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA 363 (458)
T ss_dssp TCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG
T ss_pred cccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH
Confidence 6777765431 112222211 00 00001
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 323 ~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
..++.+++++.+||.+||.+||.+|||++|+|+||||+...
T Consensus 364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~ 404 (458)
T 3rp9_A 364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR 404 (458)
T ss_dssp GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence 12355799999999999999999999999999999999754
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=416.93 Aligned_cols=258 Identities=26% Similarity=0.416 Sum_probs=212.2
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC---
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--- 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--- 172 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.+.. ......+++.+|+.+++.+. ||||+++++++...
T Consensus 59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~ 136 (464)
T 3ttj_A 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTL 136 (464)
T ss_dssp EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCST
T ss_pred eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhCC-CCCCCcEEEEEccCCcc
Confidence 45678999999999999999999999999999999997542 35566778899999999997 99999999999654
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
..+||||||+++ +|.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 137 ~~~~~~~lv~E~~~~-~l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll---~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 137 EEFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 210 (464)
T ss_dssp TTCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCC
T ss_pred ccCCeEEEEEeCCCC-CHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE---eCCCCEEEEEEEe
Confidence 468999999965 5767664 359999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC--------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF-------- 320 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~-------- 320 (564)
+............+||+.|+|||++.+ .|+.++|||||||++|||++|++||.+.+..+.+..+.+.....
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 211 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp C-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred eeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 988776666677899999999999985 59999999999999999999999999988777766664421110
Q ss_pred --------------CCCCC----CC------------CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 321 --------------ESDPW----PL------------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 321 --------------~~~~~----~~------------~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
....+ +. .++++++||.+||.+||++|||++|+|+||||..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence 00000 00 1567999999999999999999999999999985
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-50 Score=417.73 Aligned_cols=265 Identities=36% Similarity=0.633 Sum_probs=219.8
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC-----CHHhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI-----SREDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
..+.++|.+.+.||+|+||.||+|.+..+++.||+|++.+.... .......+.+|+.+|+++. ||||+++++++
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~ 209 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFF 209 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCC-CTTBCCCCEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCC-CCCEeeEEEEE
Confidence 34567899999999999999999999999999999999765432 1222335789999999997 99999999998
Q ss_pred ecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 170 EDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
.. ...|+|||||++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+...+....+||+|||+
T Consensus 210 ~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 210 DA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp ES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred ec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence 64 55899999999999999998888999999999999999999999999999999999999996555566799999999
Q ss_pred ccccCCCCceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCccCCCCC
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDFESDP 324 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~ 324 (564)
+............+||+.|+|||++. ..|+.++|||||||++|+|++|..||..... ..+...+..+...+....
T Consensus 289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~ 368 (419)
T 3i6u_A 289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 368 (419)
T ss_dssp TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHH
T ss_pred ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchh
Confidence 99876666666788999999999985 3478899999999999999999999976543 345666777766655555
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+..+++.+.+||.+||..||.+|||+.++|+||||++
T Consensus 369 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 405 (419)
T 3i6u_A 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405 (419)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred hcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence 5678999999999999999999999999999999975
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=391.43 Aligned_cols=260 Identities=28% Similarity=0.483 Sum_probs=218.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... ......+.+.+|+.++++++ ||||+++++++.+....++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLK-HPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCC-CCCccchhheeecCCeEEEE
Confidence 56999999999999999999999999999999986543 24555677889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~ 257 (564)
|||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ..
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC----
T ss_pred EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE---cCCCCEEEeeCCCchhccCccc
Confidence 9999999999888878889999999999999999999999999999999999999 7788999999999987653 23
Q ss_pred ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc----------------
Q 008475 258 IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID---------------- 319 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~---------------- 319 (564)
......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+.+....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 3456688999999999974 5899999999999999999999999998877666554331100
Q ss_pred ---CCCC--------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 320 ---FESD--------PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 320 ---~~~~--------~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.+.. .++.+++.+.+||.+||..||.+|||++++|+||||++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 292 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIR 292 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhcc
Confidence 0000 1245789999999999999999999999999999998754
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-49 Score=388.52 Aligned_cols=265 Identities=38% Similarity=0.674 Sum_probs=228.5
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH---HhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR---EDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
+.++|++.+.||+|+||.||+|.+..+++.||+|++........ ...+.+.+|+.+++++. ||||+++++++.+..
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 81 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLHDIFENKT 81 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCC-CCCeeehhheecCCC
Confidence 44679999999999999999999999999999999976543221 23677899999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC-CCCcEEEeeCCCccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD-DDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~-~~~~~kl~DfG~~~~ 252 (564)
..++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++..++ ....+||+|||++..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 82 DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred eEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999999998888899999999999999999999999999999999999994321 123799999999987
Q ss_pred cCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 253 FKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 253 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
...........+++.|+|||++.+ .++.++||||||+++|+|++|..||.+....+....+......+....+..+++.
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T 3bhy_A 162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241 (283)
T ss_dssp CC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHH
T ss_pred ccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHH
Confidence 765555566789999999999974 5899999999999999999999999999988888888777665554444578999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+.+||.+||..||.+|||+.++|+||||+..
T Consensus 242 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 9999999999999999999999999999853
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=390.91 Aligned_cols=257 Identities=23% Similarity=0.302 Sum_probs=214.2
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+.+.++|++.++||+|+||+||+|.+..+++.||||++..... ..........|+..+..+..||||+++++++.+...
T Consensus 53 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~ 131 (311)
T 3p1a_A 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI 131 (311)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred chhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCE
Confidence 3455779999999999999999999999999999999865432 444455666777777777569999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
+|+||||+ +++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL---GPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CGGGCEEECCCTTCEEC
T ss_pred EEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEccceeeeec
Confidence 99999999 77898888764 469999999999999999999999999999999999999 77789999999999887
Q ss_pred CCCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
..........||+.|+|||++.+.++.++|||||||++|||++|..|+..... ...+..+... ......+++++.
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~l~ 282 (311)
T 3p1a_A 208 GTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYLP--PEFTAGLSSELR 282 (311)
T ss_dssp C------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTCCC--HHHHTTSCHHHH
T ss_pred ccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccCCC--cccccCCCHHHH
Confidence 66555566779999999999998999999999999999999999877655432 3333333221 112345899999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+||.+||++||++|||+.++|+||||++
T Consensus 283 ~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 283 SVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred HHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 9999999999999999999999999975
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-48 Score=384.34 Aligned_cols=262 Identities=34% Similarity=0.499 Sum_probs=234.5
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...++|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+. ||||+++++++.+....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~ 90 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFV 90 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEE
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCEE
Confidence 34567999999999999999999999999999999998766656677788999999999996 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 91 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 91 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE---cCCCCEEEEeccCceeccc
Confidence 9999999999999999888899999999999999999999999999999999999999 7788999999999987643
Q ss_pred -CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 -GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 -~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
........||+.|+|||++.+ .++.++||||||+++|+|++|..||......+....+..+....+ ..+++.+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 243 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAA 243 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHH
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCc----cccCHHHH
Confidence 233445678999999999985 489999999999999999999999999888888877777655433 35789999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
+||.+||..||++|||+.++++||||......
T Consensus 244 ~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~ 275 (294)
T 2rku_A 244 SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 275 (294)
T ss_dssp HHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred HHHHHHcccChhhCcCHHHHhhChheecCCcC
Confidence 99999999999999999999999999876543
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-49 Score=399.89 Aligned_cols=261 Identities=25% Similarity=0.382 Sum_probs=213.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++ ||||+++++++.+...+++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCC-CTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcC-CCCCCeeeeEEeeCCEEEEE
Confidence 469999999999999999999999999999999864331 111223457999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|||++ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp EECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE---CTTCCEEECSSSEEECC----
T ss_pred ecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE---CCCCCEEEccCcccccccCCc
Confidence 99996 5898888765 458999999999999999999999999999999999999 77789999999999765432
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCC----------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP---------- 324 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~---------- 324 (564)
.......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.+.........
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhh
Confidence 33445678999999999875 489999999999999999999999999988877777655222111111
Q ss_pred ----------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCC
Q 008475 325 ----------------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAP 366 (564)
Q Consensus 325 ----------------~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~ 366 (564)
.+.+++++.+||.+||+.||.+|||+.|+|+||||.......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 292 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTT
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccccc
Confidence 134788999999999999999999999999999999765443
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=415.78 Aligned_cols=257 Identities=32% Similarity=0.511 Sum_probs=225.7
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|++.+.||+|+||.||+|++..+|+.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+...+|+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcC-CCCEeeEEEEEeeCCEEEE
Confidence 467999999999999999999999999999999997654323334567889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 178 VMELCAGGELFDRIIQR----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl---~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE---eCCCCEEEeecceeeec
Confidence 99999999999998763 369999999999999999999999999999999999999 78889999999999876
Q ss_pred CCCCc-eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHHcCCccCCCCCCCC
Q 008475 254 KPGQI-FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE----TQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 254 ~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~----~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
..... ....+||+.|+|||++.+ .|+.++|||||||++|||++|..||.+. ....+...+......++ ..
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p----~~ 415 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DK 415 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC----TT
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC----cc
Confidence 55433 345689999999999986 5999999999999999999999999875 34567777776655443 45
Q ss_pred CCHHHHHHHHHhcccCCCCCCC-----HHHHhcCCCcCCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLT-----AHEVLCHPWICEN 362 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s-----~~~vl~hp~~~~~ 362 (564)
+++++.+||.+||..||.+||+ ++++++||||+..
T Consensus 416 ~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 8999999999999999999996 5899999999874
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-48 Score=391.29 Aligned_cols=260 Identities=34% Similarity=0.502 Sum_probs=233.7
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+. ||||+++++++.+...+|
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEE
Confidence 3467999999999999999999999999999999998766656677788999999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP- 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~- 255 (564)
+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE---cCCCCEEEeeccCceecccC
Confidence 999999999999999888899999999999999999999999999999999999999 7778999999999987642
Q ss_pred CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
........||+.|+|||++.+ .++.++|||||||++|+|++|..||......+....+..+...++ ..+++.+.+
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 270 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAAS 270 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHHH
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCC----ccCCHHHHH
Confidence 233445679999999999985 489999999999999999999999999888888877777655443 357899999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
||.+||+.||.+|||+.++|+||||.....
T Consensus 271 li~~~l~~dp~~Rps~~ell~~~~~~~~~~ 300 (335)
T 2owb_A 271 LIQKMLQTDPTARPTINELLNDEFFTSGYI 300 (335)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred HHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence 999999999999999999999999987543
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-49 Score=396.22 Aligned_cols=264 Identities=37% Similarity=0.644 Sum_probs=222.1
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC-----CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI-----SREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||||++...... .......+.+|+.+++.+. ||||+++++++.
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~ 85 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCC-CTTBCCEEEEEE
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCC-CCCCceEeeEEc
Confidence 4567799999999999999999999999999999999754321 1223345789999999997 999999999987
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
... .|+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+..++....+||+|||++
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred CCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 665 8999999999999999988889999999999999999999999999999999999999965444556999999999
Q ss_pred cccCCCCceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCccCCCCCC
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQ-GIFDAVLKGHIDFESDPW 325 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 325 (564)
.............||+.|+|||++. ..++.++|||||||++|+|++|..||...... .+...+..+...+....+
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHH
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhh
Confidence 8876554455677999999999984 35889999999999999999999999765432 455556666555443344
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
..+++.+.+||.+||..||.+|||+.++|+||||..
T Consensus 245 ~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred hhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 568999999999999999999999999999999975
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-48 Score=397.50 Aligned_cols=260 Identities=26% Similarity=0.412 Sum_probs=216.9
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS-- 172 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 172 (564)
..+.++|++.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++ ||||+++++++...
T Consensus 21 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~ 98 (367)
T 1cm8_A 21 WEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDET 98 (367)
T ss_dssp ECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSCSS
T ss_pred eeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCC-CcCCCCceeeEecCCc
Confidence 345677999999999999999999999999999999996533 35556778899999999997 99999999999765
Q ss_pred ----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 173 ----LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 173 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
..+|+||||+ +++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg 173 (367)
T 1cm8_A 99 LDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFG 173 (367)
T ss_dssp TTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCT
T ss_pred cccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE---cCCCCEEEEeee
Confidence 3469999999 8899888865 579999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC------
Q 008475 249 LSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF------ 320 (564)
Q Consensus 249 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~------ 320 (564)
++..... .....++|+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+..+.+..+.+.....
T Consensus 174 ~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 174 LARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp TCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ccccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9987543 3456789999999999875 59999999999999999999999999988777666654311100
Q ss_pred -----------------C----CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 321 -----------------E----SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 321 -----------------~----~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
. ...++.+++.+.+||.+||..||.+|||+.++|+||||....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 0 012345789999999999999999999999999999998743
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=385.21 Aligned_cols=256 Identities=33% Similarity=0.604 Sum_probs=227.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|.+..++..||+|++...........+.+.+|+.+++.+. ||||+++++++.+....++|
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCC-CCCEeeEEEEEEcCCEEEEE
Confidence 56999999999999999999999999999999996543222223467889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...... .
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~-~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM---GYKGELKIADFGWSVHAPSL-R 168 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECSSS-C
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---cCCCCEEEecccccccCccc-c
Confidence 9999999999999988899999999999999999999999999999999999999 77789999999998765432 2
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
.....|++.|+|||++.+ .++.++||||||+++|+|++|..||......+....+......++ ..+++.+.+||.
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~ 244 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLIS 244 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHHH
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC----CcCCHHHHHHHH
Confidence 345679999999999985 589999999999999999999999999888888888877655443 458999999999
Q ss_pred HhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 338 KMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+||..||.+|||+.++++||||+...
T Consensus 245 ~~l~~~p~~Rps~~~ll~h~~~~~~~ 270 (284)
T 2vgo_A 245 KLLRYHPPQRLPLKGVMEHPWVKANS 270 (284)
T ss_dssp HHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred HHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence 99999999999999999999998643
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-48 Score=407.03 Aligned_cols=264 Identities=26% Similarity=0.416 Sum_probs=213.4
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS-- 172 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 172 (564)
..+.++|++.+.||+|+||.||+|.+..+++.||||++... .......+++.+|+.+|++++ ||||+++++++...
T Consensus 22 ~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~ 99 (432)
T 3n9x_A 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRLK-SDYIIRLYDLIIPDDL 99 (432)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-TTSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCT
T ss_pred ceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-hcChHHHHHHHHHHHHHHHcC-CCCcceEEEEEecCCC
Confidence 34667899999999999999999999999999999999653 335666788999999999997 99999999999766
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
..+|+||||+. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 100 ~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl---~~~~~~kL~DFGl 175 (432)
T 3n9x_A 100 LKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGL 175 (432)
T ss_dssp TTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred CcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE---CCCCCEEEccCCC
Confidence 67999999995 6999999888889999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCC-----------------------ceecccCCCcccchhhhh--hcCCCcchHHHHHHHHHHHHhC-------
Q 008475 250 SVFFKPGQ-----------------------IFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSG------- 297 (564)
Q Consensus 250 ~~~~~~~~-----------------------~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg------- 297 (564)
++...... ..+..+||+.|+|||++. ..|+.++|||||||++|||++|
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~ 255 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIND 255 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSS
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccc
Confidence 98764332 236688999999999875 3599999999999999999984
Q ss_pred ----CCCCCCCCH-----------------HHHHHHHHc------------------------CCccCCC---CCCCCCC
Q 008475 298 ----VPPFWAETQ-----------------QGIFDAVLK------------------------GHIDFES---DPWPLIS 329 (564)
Q Consensus 298 ----~~pf~~~~~-----------------~~~~~~i~~------------------------~~~~~~~---~~~~~~s 329 (564)
.++|.+.+. .+.+..+.. .....+. ..++.++
T Consensus 256 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 335 (432)
T 3n9x_A 256 PTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSIS 335 (432)
T ss_dssp GGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSC
T ss_pred cccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCC
Confidence 444444320 111111111 0000000 0124589
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+++.+||.+||..||.+|||++|+|+||||+....
T Consensus 336 ~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 336 DDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence 99999999999999999999999999999997543
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-49 Score=401.03 Aligned_cols=266 Identities=36% Similarity=0.640 Sum_probs=226.0
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccC--CCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL--ISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
.+.++|++.+.||+|+||.||+|.+..++..||+|++.+... ......+.+.+|+.+++.++ ||||+++++++.+..
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCC-CCCcceeehhhccCC
Confidence 456779999999999999999999999999999999875432 13445678999999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHh----------------------------------------cCCCCHHHHHHHHHHHHHHH
Q 008475 174 CVHIVMELCAGGELFDRIIQ----------------------------------------RGHYSERKAAELTRIIVGVV 213 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~----------------------------------------~~~~~~~~~~~i~~qi~~~l 213 (564)
..++|||||+||+|.+++.. ...+++..++.++.||+.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999998842 11236788899999999999
Q ss_pred HHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC---C--ceecccCCCcccchhhhh---hcCCCcchHH
Q 008475 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG---Q--IFTDVVGSPYYVAPEVLL---KHYGPEADVW 285 (564)
Q Consensus 214 ~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~---~--~~~~~~gt~~y~aPE~~~---~~~~~~~Dvw 285 (564)
.|||++||+||||||+|||+.. +..+.+||+|||++...... . ......||+.|+|||++. ..++.++|||
T Consensus 182 ~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw 260 (345)
T 3hko_A 182 HYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260 (345)
T ss_dssp HHHHHTTEECCCCCGGGEEESC-SSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred HHHHHCCccccCCChhhEEEec-CCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence 9999999999999999999932 12338999999999865321 1 234567999999999996 3589999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 286 TAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 286 SlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
||||++|+|++|+.||.+....+....+..+...+..+.+..+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 261 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~ 338 (345)
T 3hko_A 261 SAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS 338 (345)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred HHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence 999999999999999999999888888888877776666667899999999999999999999999999999998754
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-48 Score=381.79 Aligned_cols=257 Identities=23% Similarity=0.381 Sum_probs=221.6
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec----CC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----SL 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----~~ 173 (564)
...|++.+.||+|+||.||+|.+..++..||+|++..... .....+.+.+|+.+++.++ ||||+++++++.. ..
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 102 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKK 102 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCC-CCCeeeeeeeeccccCCCc
Confidence 3458999999999999999999999999999999976544 5566788999999999997 9999999999875 46
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
.+++||||+++++|.+++...+.+++..++.++.||+.||.|||++| |+||||||+|||+. +.++.+||+|||++.
T Consensus 103 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGG
T ss_pred eEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE--CCCCCEEEeeCCCcc
Confidence 69999999999999999988889999999999999999999999999 99999999999993 267789999999997
Q ss_pred ccCCCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
..... ......||+.|+|||++.+.++.++|||||||++|+|++|..||.... .......+..+..... .....++
T Consensus 181 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 257 (290)
T 1t4h_A 181 LKRAS-FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS--FDKVAIP 257 (290)
T ss_dssp GCCTT-SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGG--GGGCCCH
T ss_pred ccccc-ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccc--cCCCCCH
Confidence 65433 345578999999999998889999999999999999999999998744 4455555554432221 2234678
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
++.+||.+||..||.+|||+.++|+||||++
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 258 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 9999999999999999999999999999986
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=395.17 Aligned_cols=262 Identities=26% Similarity=0.420 Sum_probs=220.2
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec------
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED------ 171 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~------ 171 (564)
.++|++.+.||+|+||.||+|++..+|+.||+|++..... .......+.+|+.+++.++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-SSSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-cccchHHHHHHHHHHHhcc-CCCcccHhheeeccccccc
Confidence 3569999999999999999999999999999999865543 2333456778999999997 9999999999987
Q ss_pred --CCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 172 --SLCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 172 --~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
...+|+||||+++ +|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg 169 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFG 169 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCT
T ss_pred cCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCCEEEccch
Confidence 4578999999964 777777553 579999999999999999999999999999999999999 778899999999
Q ss_pred CccccCC-----CCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC
Q 008475 249 LSVFFKP-----GQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE 321 (564)
Q Consensus 249 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 321 (564)
++..... ........||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+.+.....+
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9976542 223345678999999999974 489999999999999999999999999988887777765433333
Q ss_pred CCCCCC----------------------------CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 322 SDPWPL----------------------------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 322 ~~~~~~----------------------------~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
...++. .++.+.+||.+||+.||.+|||+.|+|+||||......
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 321 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMP 321 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence 333222 26789999999999999999999999999999875443
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-48 Score=398.39 Aligned_cols=256 Identities=24% Similarity=0.443 Sum_probs=217.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcC-CCCccEEEEEEecCCeEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG-HKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-h~niv~~~~~~~~~~~~~l 177 (564)
..|++.+.||+|+||.||+|.+.. ++.||||++..... .....+.+.+|+.+++++.. ||||+++++++.....+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 459999999999999999999764 89999999976543 55667889999999999974 6999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||| +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ + ++.+||+|||++.......
T Consensus 134 v~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI---V-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEE---S-SSCEEECCCSSSCCC----
T ss_pred EEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---E-CCeEEEEecCccccccCCC
Confidence 999 5588999999988899999999999999999999999999999999999999 3 3689999999998765432
Q ss_pred ---ceecccCCCcccchhhhhh------------cCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCccCC
Q 008475 258 ---IFTDVVGSPYYVAPEVLLK------------HYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFE 321 (564)
Q Consensus 258 ---~~~~~~gt~~y~aPE~~~~------------~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~ 321 (564)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ....+..+........
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCC
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCC
Confidence 2345689999999999864 58889999999999999999999998754 3345556665544433
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 322 SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 322 ~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.+ ...++++.+||.+||..||.+|||+.++|+||||....
T Consensus 289 ~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 289 FP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp CC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred CC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 32 34588999999999999999999999999999998643
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=395.99 Aligned_cols=254 Identities=30% Similarity=0.538 Sum_probs=220.5
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH-----HhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR-----EDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
..+.++|++.+.||+|+||.||+|.+..+++.||||++........ ...+.+.+|+.++++++ ||||+++++++
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~ 98 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HANIIKVLDIF 98 (335)
T ss_dssp THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC-CTTBCCEEEEE
T ss_pred cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEE
Confidence 4466789999999999999999999999999999999976543221 13345678999999996 99999999999
Q ss_pred ecCCeEEEEEeccCCC-chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 170 EDSLCVHIVMELCAGG-ELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
.+...+++||||+.+| +|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg 175 (335)
T 3dls_A 99 ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFG 175 (335)
T ss_dssp ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE---cCCCcEEEeecc
Confidence 9999999999999766 999999888899999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCCCceecccCCCcccchhhhhhc-C-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 249 LSVFFKPGQIFTDVVGSPYYVAPEVLLKH-Y-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 249 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
++............+||+.|+|||++.+. + +.++|||||||++|+|++|..||..... .... ......
T Consensus 176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~----~~~~~~ 245 (335)
T 3dls_A 176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEA----AIHPPY 245 (335)
T ss_dssp TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTT----CCCCSS
T ss_pred cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhh----ccCCCc
Confidence 99987766666678899999999999853 4 7899999999999999999999976322 1111 112234
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.+++++.+||.+||..||.+|||+.++++||||+..
T Consensus 246 ~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~ 281 (335)
T 3dls_A 246 LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP 281 (335)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence 589999999999999999999999999999999864
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-48 Score=383.23 Aligned_cols=259 Identities=36% Similarity=0.604 Sum_probs=220.6
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.++ ||||+++++++......+
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 87 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHIIKLYQVISTPTDFF 87 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCeEE
Confidence 4467999999999999999999999999999999996543222334567889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE---CTTSCEEECCCCGGGCCCC-
T ss_pred EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE---CCCCCEEEeecccccccCCC
Confidence 999999999999999888889999999999999999999999999999999999999 77789999999999887665
Q ss_pred CceecccCCCcccchhhhhhc-C-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLKH-Y-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
.......+++.|+|||++.+. + +.++||||||+++|+|++|..||...........+..+....+ ..++..+.+
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~ 240 (276)
T 2h6d_A 165 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVAT 240 (276)
T ss_dssp ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc----hhcCHHHHH
Confidence 555567899999999999864 3 5799999999999999999999999888888888877654433 357899999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
||.+||+.||.+|||+.++++||||+...
T Consensus 241 li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 241 LLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred HHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 99999999999999999999999998643
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-48 Score=392.79 Aligned_cols=256 Identities=26% Similarity=0.431 Sum_probs=223.9
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|.+.+.||+|+||.||+|.+..+++.||||++...........+.+.+|+.++++++ ||||+++++++.+....+
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 130 (348)
T 1u5q_A 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAW 130 (348)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCeEE
Confidence 4466999999999999999999999999999999997655445556678999999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+||||+. |+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 131 lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 131 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSSSS
T ss_pred EEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEeeccCceecCC
Confidence 9999996 688887754 5679999999999999999999999999999999999999 6778999999999987543
Q ss_pred CCceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.....||+.|+|||++. +.++.++|||||||++|||++|..||...+....+..+..+..... ....+++.
T Consensus 207 ---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 281 (348)
T 1u5q_A 207 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGHWSEY 281 (348)
T ss_dssp ---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--CCTTSCHH
T ss_pred ---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC--CCCCCCHH
Confidence 23567999999999985 4589999999999999999999999998887777666665543222 23468999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+.+||.+||..||.+|||+.++++||||...
T Consensus 282 l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 282 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred HHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence 9999999999999999999999999999763
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-48 Score=397.22 Aligned_cols=261 Identities=23% Similarity=0.392 Sum_probs=220.1
Q ss_pred cccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc----CCCCccEEEEE
Q 008475 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA----GHKNIVTIKGA 168 (564)
Q Consensus 93 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~~~~~ 168 (564)
....+.++|++.++||+|+||.||+|++..+++.||||++.. .......+..|+.+++.+. +||||++++++
T Consensus 29 ~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~ 104 (360)
T 3llt_A 29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN----IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGK 104 (360)
T ss_dssp TTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS----CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred cceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc----chhhhhhhHHHHHHHHHhcccCCCCCCeecccce
Confidence 444567889999999999999999999999999999999964 3445567788999999986 59999999999
Q ss_pred EecCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC----------
Q 008475 169 YEDSLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK---------- 236 (564)
Q Consensus 169 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~---------- 236 (564)
+.....+|+||||+ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+...
T Consensus 105 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~ 183 (360)
T 3llt_A 105 FMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVR 183 (360)
T ss_dssp EEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred eeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchh
Confidence 99999999999999 999999997754 59999999999999999999999999999999999999421
Q ss_pred ------------CCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCC
Q 008475 237 ------------DDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWA 303 (564)
Q Consensus 237 ------------~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~ 303 (564)
...+.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||..
T Consensus 184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp CTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 1267899999999986443 2345789999999999985 599999999999999999999999998
Q ss_pred CCHHHHHHHHHcCCccCCCC---------------------CC---------------------CCCCHHHHHHHHHhcc
Q 008475 304 ETQQGIFDAVLKGHIDFESD---------------------PW---------------------PLISDSAKDLIRKMLC 341 (564)
Q Consensus 304 ~~~~~~~~~i~~~~~~~~~~---------------------~~---------------------~~~s~~~~~li~~~l~ 341 (564)
....+.+..+.......+.. .+ ...++.+.+||.+||+
T Consensus 262 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 341 (360)
T 3llt_A 262 HEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQ 341 (360)
T ss_dssp SSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCC
T ss_pred CcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhc
Confidence 88777666654422211100 00 0124778899999999
Q ss_pred cCCCCCCCHHHHhcCCCcC
Q 008475 342 SQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 342 ~dp~~R~s~~~vl~hp~~~ 360 (564)
+||.+|||+.|+|+||||+
T Consensus 342 ~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 342 IDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp SSGGGSCCHHHHTTSGGGC
T ss_pred CChhhCCCHHHHhcCcccC
Confidence 9999999999999999995
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-49 Score=395.51 Aligned_cols=263 Identities=24% Similarity=0.342 Sum_probs=224.0
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL- 173 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 173 (564)
..+.++|++.+.||+|+||.||+|++..+++.||||++.............+.+|+.+++++. ||||+++++++....
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~ 86 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETP 86 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCC-CTTBCCEEEEEEEEET
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCC-CCCcceEEEeeeccCC
Confidence 456788999999999999999999999999999999998766556667788999999999997 999999999987543
Q ss_pred ---eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 174 ---CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 174 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
..|+||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIA 163 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---ETTSCEEECCCSCC
T ss_pred CCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE---cCCCCEEEeeccCc
Confidence 359999999999999999988899999999999999999999999999999999999999 66788999999999
Q ss_pred cccCCCC----ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCC
Q 008475 251 VFFKPGQ----IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW 325 (564)
Q Consensus 251 ~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 325 (564)
....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+.......+....
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 243 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 243 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHS
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCccccc
Confidence 8654322 2234678999999999985 5899999999999999999999999999888777776665544443334
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
..+++++.+||.+||..||.+||++.+++.|+|+.-
T Consensus 244 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 568999999999999999999999999999999974
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=386.43 Aligned_cols=256 Identities=29% Similarity=0.486 Sum_probs=222.9
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
..|...+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.+++.++ ||||+++++++......++|
T Consensus 45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 120 (321)
T 2c30_A 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEELWVL 120 (321)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCSHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc---hhHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEE
Confidence 34778889999999999999999999999999997543 234567889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-C
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-Q 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~ 257 (564)
|||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...... .
T Consensus 121 ~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~ 196 (321)
T 2c30_A 121 MEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVP 196 (321)
T ss_dssp ECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSSSC
T ss_pred EecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCcEEEeeeeeeeecccCcc
Confidence 999999999997754 579999999999999999999999999999999999999 77789999999998876543 2
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
......||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........+....... ......+++.+.+||
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li 275 (321)
T 2c30_A 197 KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK-LKNSHKVSPVLRDFL 275 (321)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC-CTTGGGSCHHHHHHH
T ss_pred ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-cCccccCCHHHHHHH
Confidence 3355789999999999975 58999999999999999999999999988888777776653322 112245789999999
Q ss_pred HHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.+||..||.+|||+.++++||||....
T Consensus 276 ~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 276 ERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHHccCChhhCcCHHHHhcChhhccCC
Confidence 999999999999999999999998644
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-49 Score=405.39 Aligned_cols=257 Identities=28% Similarity=0.434 Sum_probs=210.5
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC--
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-- 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-- 173 (564)
....+|++.+.||+|+||.||+|++..++. ||+|++..... ...+|+.+++.++ ||||+++++++....
T Consensus 37 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~-------~~~~E~~il~~l~-h~niv~l~~~~~~~~~~ 107 (394)
T 4e7w_A 37 QREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR-------FKNRELQIMRIVK-HPNVVDLKAFFYSNGDK 107 (394)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT-------SCCHHHHHHHTCC-CTTBCCEEEEEEEESSS
T ss_pred cccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc-------hHHHHHHHHHhCC-CCCcceEEEEEEecCCC
Confidence 345679999999999999999999877665 88887754322 1236999999997 999999999995433
Q ss_pred ----eEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEe
Q 008475 174 ----CVHIVMELCAGGELFDRII----QRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAI 245 (564)
Q Consensus 174 ----~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~ 245 (564)
.+++|||||+++ +...+. ....+++..++.++.||+.||.|||++||+||||||+|||+. ..++.+||+
T Consensus 108 ~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~--~~~~~~kL~ 184 (394)
T 4e7w_A 108 KDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--PPSGVLKLI 184 (394)
T ss_dssp SSCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEEC
T ss_pred CCceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc--CCCCcEEEe
Confidence 388999999764 444333 256799999999999999999999999999999999999993 167899999
Q ss_pred eCCCccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC------
Q 008475 246 DFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH------ 317 (564)
Q Consensus 246 DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~------ 317 (564)
|||+++...........++|+.|+|||++.+ .|+.++|||||||++|+|++|+.||.+.+..+.+..+.+..
T Consensus 185 DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~ 264 (394)
T 4e7w_A 185 DFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSRE 264 (394)
T ss_dssp CCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred eCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 9999988766666667889999999999975 48999999999999999999999999988776666554311
Q ss_pred -----------ccCCC--------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 318 -----------IDFES--------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 318 -----------~~~~~--------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
..++. ...+.+++++.+||.+||..||.+|||+.++|+||||++...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 265 QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp HHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred HHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 00000 012347899999999999999999999999999999997543
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-48 Score=383.59 Aligned_cols=257 Identities=33% Similarity=0.588 Sum_probs=198.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|++..+++.||+|++...........+.+.+|+.++++++ ||||+++++++.+....++|
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBC-CTTBCCEEEEEECSSEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCC-CCCeEeEEEEEccCCeEEEE
Confidence 45999999999999999999999999999999996543222233567899999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE---CTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEEeecceeeccCCC
Confidence 9999999999998765 579999999999999999999999999999999999999 77789999999999876432
Q ss_pred CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+...... ....++.++.+|
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l 242 (278)
T 3cok_A 167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE----MPSFLSIEAKDL 242 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCC----CCTTSCHHHHHH
T ss_pred CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccC----CccccCHHHHHH
Confidence 23345678999999999875 5889999999999999999999999877655555444333222 224589999999
Q ss_pred HHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 336 IRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
|.+||..||.+|||+.++++||||....
T Consensus 243 i~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 243 IHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 9999999999999999999999998644
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-48 Score=402.88 Aligned_cols=263 Identities=25% Similarity=0.376 Sum_probs=219.0
Q ss_pred ccccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc-----CCCCccEEE
Q 008475 92 HKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA-----GHKNIVTIK 166 (564)
Q Consensus 92 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~ 166 (564)
...+.+..+|++.+.||+|+||.||+|.+..+++.||||++.. .......+.+|+.+++.++ +|+||++++
T Consensus 90 ~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~ 165 (429)
T 3kvw_A 90 VPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN----EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHML 165 (429)
T ss_dssp CTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEE
T ss_pred cCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC----ccchHHHHHHHHHHHHHHhhccccCCcCEEEEE
Confidence 3456677889999999999999999999999999999999964 3445567888999999885 477999999
Q ss_pred EEEecCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCc--E
Q 008475 167 GAYEDSLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS--L 242 (564)
Q Consensus 167 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~--~ 242 (564)
+++.....+|+||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+ +.++. +
T Consensus 166 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl---~~~~~~~v 241 (429)
T 3kvw_A 166 ENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL---KQQGRSGI 241 (429)
T ss_dssp EEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEE---SSTTSCCE
T ss_pred eecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---ccCCCcce
Confidence 99999999999999995 69999887754 49999999999999999999999999999999999999 55555 9
Q ss_pred EEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC
Q 008475 243 KAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE 321 (564)
Q Consensus 243 kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 321 (564)
||+|||++..... .....+||+.|+|||++.+ .|+.++|||||||++|||++|.+||.+.+..+.+..+.......+
T Consensus 242 kL~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~ 319 (429)
T 3kvw_A 242 KVIDFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS 319 (429)
T ss_dssp EECCCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred EEeecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence 9999999976543 3345789999999999985 599999999999999999999999999888776665543100000
Q ss_pred ------------------------------------------------CC-------CCCCCCHHHHHHHHHhcccCCCC
Q 008475 322 ------------------------------------------------SD-------PWPLISDSAKDLIRKMLCSQPSE 346 (564)
Q Consensus 322 ------------------------------------------------~~-------~~~~~s~~~~~li~~~l~~dp~~ 346 (564)
.. .....++.+.+||.+||++||++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~ 399 (429)
T 3kvw_A 320 QKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAV 399 (429)
T ss_dssp HHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhh
Confidence 00 00124788999999999999999
Q ss_pred CCCHHHHhcCCCcCCCCC
Q 008475 347 RLTAHEVLCHPWICENGV 364 (564)
Q Consensus 347 R~s~~~vl~hp~~~~~~~ 364 (564)
|||+.|+|+||||+....
T Consensus 400 Rpta~e~L~Hpw~~~~~~ 417 (429)
T 3kvw_A 400 RMTPGQALRHPWLRRRLP 417 (429)
T ss_dssp SCCHHHHHTSTTTC----
T ss_pred CCCHHHHhCChhhccCCC
Confidence 999999999999987543
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=380.98 Aligned_cols=263 Identities=27% Similarity=0.410 Sum_probs=222.2
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
...+.++|++.+.||+|+||.||+|.+..++..||+|++...........+.+.+|+.++++++ ||||+++++++.+..
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~ 84 (294)
T 4eqm_A 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS-HQNIVSMIDVDEEDD 84 (294)
T ss_dssp SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC-BTTBCCEEEEEECSS
T ss_pred hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCC-CCCCceEEEeeeeCC
Confidence 3456788999999999999999999999999999999997665556777788999999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.+|+||||++|++|.+++...+++++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCSSSTTC
T ss_pred eEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEEeCCCcccc
Confidence 999999999999999999988899999999999999999999999999999999999999 77889999999999876
Q ss_pred CCCC--ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc-CCCCCCCCCC
Q 008475 254 KPGQ--IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID-FESDPWPLIS 329 (564)
Q Consensus 254 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~s 329 (564)
.... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.............. ......+.++
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (294)
T 4eqm_A 162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP 241 (294)
T ss_dssp -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSC
T ss_pred ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCC
Confidence 4332 2334679999999999985 5889999999999999999999999998877665555444332 2222345689
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
+.+.++|.+||..||.+||+..+.+.+.|..
T Consensus 242 ~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 242 QSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 9999999999999999999666666665543
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-48 Score=395.16 Aligned_cols=259 Identities=28% Similarity=0.423 Sum_probs=208.9
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC--
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-- 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-- 173 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ......+.+.+|+.+++.+. ||||+++++++....
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~ 99 (371)
T 2xrw_A 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSL 99 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSCCST
T ss_pred chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcC-CCCccceEEeecccccc
Confidence 45578999999999999999999999999999999997543 34566678899999999997 999999999997654
Q ss_pred ----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 174 ----CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 174 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
.+|+||||++ ++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 100 ~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 100 EEFQDVYIVMELMD-ANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 173 (371)
T ss_dssp TTCCEEEEEEECCS-EEHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCCCC
T ss_pred ccccceEEEEEcCC-CCHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEEEeec
Confidence 7899999996 57888775 469999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES------ 322 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~------ 322 (564)
+............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+.+.......
T Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 174 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 987665555566789999999999985 5899999999999999999999999998887777776553211100
Q ss_pred -----------CCC--------------C-------CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 323 -----------DPW--------------P-------LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 323 -----------~~~--------------~-------~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+.+ + ..++++++||.+||..||.+|||++++|+||||+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence 000 0 015679999999999999999999999999999853
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-47 Score=385.64 Aligned_cols=255 Identities=29% Similarity=0.505 Sum_probs=213.5
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CCeE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SLCV 175 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~ 175 (564)
.++|++.+.||+|+||.||+|.+..+++.||+|++... ..+.+.+|+.+++++.+||||+++++++.+ ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 46799999999999999999999999999999998643 246788999999999889999999999987 6789
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
++||||+++++|.+++. .+++..++.++.||+.||.|||++||+||||||+|||+.. +...+||+|||++.....
T Consensus 109 ~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCCTTCEECCT
T ss_pred EEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC--CCCEEEEEeCCCceEcCC
Confidence 99999999999988774 4899999999999999999999999999999999999931 333899999999988776
Q ss_pred CCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHH-------------HcCCcc
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAV-------------LKGHID 319 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i-------------~~~~~~ 319 (564)
........+++.|+|||++.+ .++.++|||||||++|+|++|..||.... ..+.+..+ .+....
T Consensus 184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3nsz_A 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263 (330)
T ss_dssp TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred CCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence 666667789999999999875 48999999999999999999999995433 32222221 111111
Q ss_pred CC--------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 320 FE--------------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 320 ~~--------------------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.. ......+++++.+||.+||.+||.+|||++|+|+||||+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 10 111123789999999999999999999999999999998643
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=388.25 Aligned_cols=259 Identities=25% Similarity=0.402 Sum_probs=217.3
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+.+|+.++++++ ||||+++++++.+....++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLR-HENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCC-CCCEeeEEEEeecCCEEEE
Confidence 356999999999999999999999999999999986543 34555677889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-C
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-G 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~ 256 (564)
||||+++++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .
T Consensus 102 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCTTC-------
T ss_pred EEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE---cCCCcEEEEeCCCceeecCCc
Confidence 99999998888887777889999999999999999999999999999999999999 7778999999999976543 2
Q ss_pred CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc----------------
Q 008475 257 QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI---------------- 318 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~---------------- 318 (564)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+.....
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 34456789999999999975 589999999999999999999999998887665555432100
Q ss_pred ---cCCC--------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 319 ---DFES--------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 319 ---~~~~--------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
..+. ..++.+++.+.+||.+||..||.+|||+.|+|+||||+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 312 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence 0000 012357899999999999999999999999999999975
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-48 Score=394.51 Aligned_cols=261 Identities=26% Similarity=0.424 Sum_probs=204.8
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC-
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS- 172 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 172 (564)
...+.++|++.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++ ||||+++++++...
T Consensus 24 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~ 101 (367)
T 2fst_X 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 101 (367)
T ss_dssp EEEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCS
T ss_pred ccCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEecCC
Confidence 3445678999999999999999999999999999999996532 35556778899999999997 99999999999754
Q ss_pred -----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 173 -----LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 173 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
..+|+|||++ +++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+||
T Consensus 102 ~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kL~DF 176 (367)
T 2fst_X 102 SLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDF 176 (367)
T ss_dssp SGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECC-
T ss_pred ccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE---CCCCCEEEeec
Confidence 6689999999 7899888765 679999999999999999999999999999999999999 77889999999
Q ss_pred CCccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc------
Q 008475 248 GLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID------ 319 (564)
Q Consensus 248 G~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~------ 319 (564)
|++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.+....
T Consensus 177 G~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 177 GLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred cccccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99987543 2455789999999999875 5899999999999999999999999998877766665431100
Q ss_pred -----------------CCCC----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 320 -----------------FESD----PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 320 -----------------~~~~----~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.+.. .++.+++.+.+||.+||..||.+|||+.++|+||||....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~ 319 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence 0000 1235689999999999999999999999999999998754
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=390.16 Aligned_cols=263 Identities=26% Similarity=0.369 Sum_probs=215.4
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC--HHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS--REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..++|++.+.||+|+||.||+|.+..+|+.||||++....... ....+.+.+|+.+++.+. ||||+++++++.+...
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSN 86 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCC-CCCCCeEEEEEeeCCc
Confidence 3456999999999999999999999999999999997543211 112346789999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++||||+++ +|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE---cCCCCEEEEecccceec
Confidence 9999999965 888888664 368999999999999999999999999999999999999 77889999999999876
Q ss_pred CC-CCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCC------
Q 008475 254 KP-GQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP------ 324 (564)
Q Consensus 254 ~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~------ 324 (564)
.. .......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+...........
T Consensus 163 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 242 (346)
T 1ua2_A 163 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 242 (346)
T ss_dssp TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTS
T ss_pred cCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhcc
Confidence 43 334456789999999999974 488999999999999999999999999988877777654321111111
Q ss_pred ------------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 325 ------------------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 325 ------------------~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+..+++++.+||.+||..||.+|||+.|+|+||||.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~ 300 (346)
T 1ua2_A 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG 300 (346)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCC
Confidence 1346789999999999999999999999999999987543
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=385.79 Aligned_cols=258 Identities=24% Similarity=0.430 Sum_probs=213.0
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCC-CCccEEEEEEecCCeE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH-KNIVTIKGAYEDSLCV 175 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~niv~~~~~~~~~~~~ 175 (564)
..++|++.+.||+|+||.||+|.+ .+++.||||++.... ......+.+.+|+.+++.+..| |||+++++++.+...+
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 84 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 84 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEE
Confidence 345699999999999999999997 568899999997554 3556677899999999999732 9999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|||||+ .+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+. ++.+||+|||++.....
T Consensus 85 ~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 85 YMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCCC--
T ss_pred EEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----CCcEEEeecccccccCc
Confidence 999995 5889999999988999999999999999999999999999999999999993 46799999999987654
Q ss_pred CC---ceecccCCCcccchhhhh------------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCcc
Q 008475 256 GQ---IFTDVVGSPYYVAPEVLL------------KHYGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHID 319 (564)
Q Consensus 256 ~~---~~~~~~gt~~y~aPE~~~------------~~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~ 319 (564)
.. .....+||+.|+|||++. +.++.++|||||||++|+|++|+.||..... ...+..+......
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 239 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 239 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcc
Confidence 32 234568999999999986 3478899999999999999999999976433 3444444443332
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 320 FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 320 ~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.. .....++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 240 ~~--~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 281 (343)
T 3dbq_A 240 IE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281 (343)
T ss_dssp CC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred cC--CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence 22 2244678999999999999999999999999999998643
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-47 Score=375.00 Aligned_cols=257 Identities=21% Similarity=0.329 Sum_probs=215.0
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+..+..+.+||||+++++++.+....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 355679999999999999999999999999999999976543 3344567889999999995599999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC--------------
Q 008475 176 HIVMELCAGGELFDRIIQR----GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD-------------- 237 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~-------------- 237 (564)
++||||+++++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||+..++
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999999764 6799999999999999999999999999999999999995322
Q ss_pred --CCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhhc--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 008475 238 --DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH--YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAV 313 (564)
Q Consensus 238 --~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i 313 (564)
....+||+|||++....... ...||+.|+|||++.+. ++.++|||||||++|+|++|.+|+.... ....+
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~ 240 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEI 240 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHH
T ss_pred cCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHH
Confidence 45589999999998765432 34689999999999854 5579999999999999999998875543 33444
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 314 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
..+.... ....+++++.+||.+||..||.+|||+.++++||||...
T Consensus 241 ~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 241 RQGRLPR---IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HTTCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred HcCCCCC---CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 5544321 224689999999999999999999999999999999864
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-49 Score=406.36 Aligned_cols=253 Identities=15% Similarity=0.166 Sum_probs=207.8
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc--CCCCccEEE-----
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA--GHKNIVTIK----- 166 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~----- 166 (564)
.....+.|++.+.||+|+||.||+|++..+|+.||||++...........+.+.+|+.+++.++ +||||++++
T Consensus 68 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~ 147 (377)
T 3byv_A 68 LGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 147 (377)
T ss_dssp SSCCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCC
T ss_pred cCCCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhh
Confidence 3344577999999999999999999998999999999998655545566788999996555553 499999998
Q ss_pred --EEEecCCe-----------------EEEEEeccCCCchHHHHHhcCCCCH-------HHHHHHHHHHHHHHHHHHHCC
Q 008475 167 --GAYEDSLC-----------------VHIVMELCAGGELFDRIIQRGHYSE-------RKAAELTRIIVGVVEACHSLG 220 (564)
Q Consensus 167 --~~~~~~~~-----------------~~lv~e~~~~~~L~~~l~~~~~~~~-------~~~~~i~~qi~~~l~~lH~~~ 220 (564)
+++.+.+. .||||||+ +|+|.+++...+.+++ ..+..|+.||+.||.|||++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 226 (377)
T 3byv_A 148 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG 226 (377)
T ss_dssp CSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 77766543 89999999 6899999987655655 788889999999999999999
Q ss_pred CEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh------------cCCCcchHHHHH
Q 008475 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK------------HYGPEADVWTAG 288 (564)
Q Consensus 221 iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~------------~~~~~~DvwSlG 288 (564)
|+||||||+|||+ +.++.+||+|||++.... ......+| +.|+|||++.+ .++.++||||||
T Consensus 227 ivHrDikp~NIll---~~~~~~kL~DFG~a~~~~--~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG 300 (377)
T 3byv_A 227 LVHTYLRPVDIVL---DQRGGVFLTGFEHLVRDG--ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALG 300 (377)
T ss_dssp EECSCCCGGGEEE---CTTCCEEECCGGGCEETT--CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHH
T ss_pred eecCCCCHHHEEE---cCCCCEEEEechhheecC--CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHH
Confidence 9999999999999 677899999999998633 34556778 99999999974 599999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 289 VILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 289 ~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
|++|||++|+.||.+.........+.. .+..+++++.+||.+||..||.+|||+.++++||||+.
T Consensus 301 ~il~elltg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 365 (377)
T 3byv_A 301 LVIYWIWCADLPITKDAALGGSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 365 (377)
T ss_dssp HHHHHHHHSSCCC------CCSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred HHHHHHHHCCCCCcccccccchhhhhh--------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence 999999999999977665433333222 23568999999999999999999999999999999964
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-47 Score=394.43 Aligned_cols=254 Identities=28% Similarity=0.432 Sum_probs=212.4
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----- 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----- 171 (564)
..++|++.+.||+|+||.||+|.+..+|+.||||++..... ...+|+.+++.+. ||||++++++|..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLD-HVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCC-CTTBCCEEEEEEEC----
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcC-CCCccchhheeeecCccc
Confidence 34679999999999999999999999999999999865422 1236999999997 9999999999843
Q ss_pred ---------------------------------CCeEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHH
Q 008475 172 ---------------------------------SLCVHIVMELCAGGELFDRII----QRGHYSERKAAELTRIIVGVVE 214 (564)
Q Consensus 172 ---------------------------------~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~ 214 (564)
...+++||||++ ++|.+.+. ..+.+++..++.++.||+.||.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 345899999997 57766664 3567999999999999999999
Q ss_pred HHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHH
Q 008475 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILY 292 (564)
Q Consensus 215 ~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~ 292 (564)
|||++||+||||||+|||+. ..++.+||+|||++.............+|+.|+|||++.+ .++.++||||+||++|
T Consensus 156 ~LH~~gi~H~Dikp~Nil~~--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 156 FIHSLGICHRDIKPQNLLVN--SKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp HHHTTTEECSCCCGGGEEEE--TTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred HHHHCcCccCccCHHHEEEc--CCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 99999999999999999993 2467899999999998766666677889999999999875 4899999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcCCc-----------------cCCCC--------CCCCCCHHHHHHHHHhcccCCCCC
Q 008475 293 ILLSGVPPFWAETQQGIFDAVLKGHI-----------------DFESD--------PWPLISDSAKDLIRKMLCSQPSER 347 (564)
Q Consensus 293 elltg~~pf~~~~~~~~~~~i~~~~~-----------------~~~~~--------~~~~~s~~~~~li~~~l~~dp~~R 347 (564)
+|++|+.||.+.+..+.+..+.+... .++.. ....+++++.+||.+||..||.+|
T Consensus 234 ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 99999999999888777666643100 01100 123478999999999999999999
Q ss_pred CCHHHHhcCCCcCC
Q 008475 348 LTAHEVLCHPWICE 361 (564)
Q Consensus 348 ~s~~~vl~hp~~~~ 361 (564)
||+.|+|+||||+.
T Consensus 314 ~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 314 INPYEAMAHPFFDH 327 (383)
T ss_dssp CCHHHHHTSGGGHH
T ss_pred CCHHHHhcCHHHHH
Confidence 99999999999975
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-47 Score=376.93 Aligned_cols=275 Identities=27% Similarity=0.425 Sum_probs=233.2
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...+.|++.+.||+|+||.||+|.+..+++.||+|++..... ....+.+.+|+.+++.+. ||||+++++++.+...+
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 95 (303)
T 3a7i_A 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKL 95 (303)
T ss_dssp CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeE
Confidence 345679999999999999999999999999999999975542 345678899999999996 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
++||||+++++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 96 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECBT
T ss_pred EEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE---CCCCCEEEeecccceecCc
Confidence 999999999999998754 579999999999999999999999999999999999999 7778999999999977654
Q ss_pred CC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 GQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+..+... .....++..+.
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~ 248 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP---TLEGNYSKPLK 248 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC---CCCSSCCHHHH
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCC---CCccccCHHHH
Confidence 32 2345678999999999985 5899999999999999999999999988887777776655432 22346899999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhh
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFS 382 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~ 382 (564)
+||.+||..||.+|||+.++++||||...... .+...+++.+++++.
T Consensus 249 ~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~ 295 (303)
T 3a7i_A 249 EFVEACLNKEPSFRPTAKELLKHKFILRNAKK--TSYLTELIDRYKRWK 295 (303)
T ss_dssp HHHHHHCCSSGGGSCCHHHHTTCHHHHHHCCC--GGGGHHHHHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHhhChhhhcCCCc--cHHHHHHHHHHHHhh
Confidence 99999999999999999999999999864332 223345555554443
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-48 Score=394.17 Aligned_cols=257 Identities=32% Similarity=0.524 Sum_probs=217.7
Q ss_pred cceeecccccccCCeEEEEEEEc---cCCcEEEEEEeccccCC-CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLI-SREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+.|++.+.||+|+||.||+|++. .+++.||||++.+.... .....+.+.+|+.+++++.+||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 56999999999999999999984 58899999998754321 112234566899999999779999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++|||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCcEEEeeCCCCeecc
Confidence 99999999999999999988899999999999999999999999999999999999999 778899999999998654
Q ss_pred CC--CceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHcCCccCCCCCC
Q 008475 255 PG--QIFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAET----QQGIFDAVLKGHIDFESDPW 325 (564)
Q Consensus 255 ~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~ 325 (564)
.. ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ...+...+......+ .
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----~ 286 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY----P 286 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCC----C
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCC----C
Confidence 32 22345689999999999984 37899999999999999999999997543 344455555443332 3
Q ss_pred CCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCCCcCCC
Q 008475 326 PLISDSAKDLIRKMLCSQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
..+++.+.+||.+||..||.+|| +++++++||||...
T Consensus 287 ~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 46899999999999999999999 99999999999864
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=387.75 Aligned_cols=254 Identities=25% Similarity=0.372 Sum_probs=208.3
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC---
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL--- 173 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~--- 173 (564)
+.++|++.+.||+|+||.||+|++..+++.||||++.... .....+.+.+|+.++++++ ||||++++++|.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLE-HPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCC-CTTBCCEEEEEEECCSCH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCC-CCCEeeEEEEEEEeccch
Confidence 3467999999999999999999999999999999997543 3445678999999999997 999999999986543
Q ss_pred ------------------------------------------------------eEEEEEeccCCCchHHHHHhcCC---
Q 008475 174 ------------------------------------------------------CVHIVMELCAGGELFDRIIQRGH--- 196 (564)
Q Consensus 174 ------------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~--- 196 (564)
.+++|||||++++|.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 38999999999999999987543
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-------------ceeccc
Q 008475 197 YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-------------IFTDVV 263 (564)
Q Consensus 197 ~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~-------------~~~~~~ 263 (564)
.++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....... .....+
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE---eCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 4566789999999999999999999999999999999 777899999999998765432 223467
Q ss_pred CCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 008475 264 GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCS 342 (564)
Q Consensus 264 gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~ 342 (564)
||+.|+|||++.+ .++.++|||||||++|+|++|..|+.. .......+....... .+...++++.+||.+||..
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~ 312 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFPL---LFTQKYPQEHMMVQDMLSP 312 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCCH---HHHHHCHHHHHHHHHHHCS
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCCc---ccccCChhHHHHHHHHccC
Confidence 9999999999985 589999999999999999998877521 122333333332211 1123568889999999999
Q ss_pred CCCCCCCHHHHhcCCCcCC
Q 008475 343 QPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 343 dp~~R~s~~~vl~hp~~~~ 361 (564)
||.+|||+.++|+||||++
T Consensus 313 ~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 313 SPTERPEATDIIENAIFEN 331 (332)
T ss_dssp SGGGSCCHHHHHHSTTCCC
T ss_pred CCCcCCCHHHHhhchhhhc
Confidence 9999999999999999975
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-47 Score=389.17 Aligned_cols=259 Identities=29% Similarity=0.438 Sum_probs=219.2
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS---- 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---- 172 (564)
+.++|++.+.||+|+||.||+|.+..++..||||++.... .....+.+.+|+.++++++ ||||+++++++...
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 101 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQ 101 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTTT
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcC-CCCCccceeEEecCCccc
Confidence 4467999999999999999999999999999999996432 4556678899999999997 99999999999754
Q ss_pred -CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 173 -LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 173 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
...|+||||+. ++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 102 ~~~~~iv~e~~~-~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 102 MKDVYIVQDLME-TDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLAR 176 (364)
T ss_dssp CCCEEEEEECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCE
T ss_pred cceEEEEEcccC-cCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE---CCCCCEEEEeCcceE
Confidence 47999999995 699888865 569999999999999999999999999999999999999 778899999999998
Q ss_pred ccCCCC----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC-----
Q 008475 252 FFKPGQ----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF----- 320 (564)
Q Consensus 252 ~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~----- 320 (564)
...... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+.......
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHH
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 764332 1245689999999998763 38999999999999999999999999888777666654311000
Q ss_pred ---------------CC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 321 ---------------ES-------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 321 ---------------~~-------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+. ...+.+++++.+||.+||.+||.+|||+.++|+||||+...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 321 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence 00 01245789999999999999999999999999999999753
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-47 Score=390.56 Aligned_cols=265 Identities=23% Similarity=0.324 Sum_probs=219.2
Q ss_pred ecccccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCC-----ccE
Q 008475 90 LGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN-----IVT 164 (564)
Q Consensus 90 ~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n-----iv~ 164 (564)
.....+.+.++|++.+.||+|+||.||+|.+..+++.||||++.. .......+..|+.+++.+..|++ |++
T Consensus 45 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~ 120 (382)
T 2vx3_A 45 IVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120 (382)
T ss_dssp CCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS----SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCC
T ss_pred EeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec----cHHHHHHHHHHHHHHHHHHhcccccceeEEE
Confidence 334455677889999999999999999999999999999999964 23456678889999998875664 999
Q ss_pred EEEEEecCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH--HCCCEeecCCCCcEEeecCCCCC
Q 008475 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACH--SLGVMHRDLKPENFLLVNKDDDF 240 (564)
Q Consensus 165 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH--~~~iiH~Dlkp~NIll~~~~~~~ 240 (564)
+++++.....+||||||+. ++|.+++... +.+++..++.++.||+.||.||| +.||+||||||+|||+.. +..+
T Consensus 121 ~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-~~~~ 198 (382)
T 2vx3_A 121 LKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-PKRS 198 (382)
T ss_dssp EEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-TTSC
T ss_pred eeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-CCCC
Confidence 9999999999999999995 5999998765 46999999999999999999999 579999999999999943 2467
Q ss_pred cEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc
Q 008475 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID 319 (564)
Q Consensus 241 ~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~ 319 (564)
.+||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.+....
T Consensus 199 ~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~ 276 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI 276 (382)
T ss_dssp CEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred cEEEEeccCceeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 899999999987643 3356789999999999985 5999999999999999999999999998887777666542111
Q ss_pred CC------------------C-----------------CCCCC-------------------------CCHHHHHHHHHh
Q 008475 320 FE------------------S-----------------DPWPL-------------------------ISDSAKDLIRKM 339 (564)
Q Consensus 320 ~~------------------~-----------------~~~~~-------------------------~s~~~~~li~~~ 339 (564)
.+ . +.... .++++.+||.+|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~m 356 (382)
T 2vx3_A 277 PPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRM 356 (382)
T ss_dssp CCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHh
Confidence 00 0 00000 013789999999
Q ss_pred cccCCCCCCCHHHHhcCCCcCCC
Q 008475 340 LCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 340 l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
|++||++|||+.|+|+||||+..
T Consensus 357 L~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 357 LDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp TCSCTTTSCCHHHHTTSGGGCC-
T ss_pred cCCChhhCCCHHHHhcCcccccC
Confidence 99999999999999999999864
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-47 Score=383.93 Aligned_cols=260 Identities=23% Similarity=0.379 Sum_probs=215.9
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC--
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-- 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-- 173 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.++++++ ||||+++++++....
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 82 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTR 82 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTC
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCCcceEEEEeecCCCc
Confidence 355779999999999999999999999999999999975432 233567789999999997 999999999998655
Q ss_pred eEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEee-cCCCCCcEEEeeCCC
Q 008475 174 CVHIVMELCAGGELFDRIIQRGH---YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV-NKDDDFSLKAIDFGL 249 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~-~~~~~~~~kl~DfG~ 249 (564)
..|+||||+++++|.+++..... +++..++.++.||+.||.|||++||+||||||+|||+. ..+..+.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 78999999999999999976433 99999999999999999999999999999999999973 334567899999999
Q ss_pred ccccCCCCceecccCCCcccchhhhh---------hcCCCcchHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHcC
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLL---------KHYGPEADVWTAGVILYILLSGVPPFWAET----QQGIFDAVLKG 316 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DvwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~ 316 (564)
+.............||+.|+|||++. ..++.++|||||||++|+|++|..||.... ..+.+..+..+
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred ceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 98877666666778999999999986 458899999999999999999999996432 23455555543
Q ss_pred CccC-------------------C--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCC
Q 008475 317 HIDF-------------------E--SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358 (564)
Q Consensus 317 ~~~~-------------------~--~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~ 358 (564)
.... + ......+++.+.+||.+||+.||++|||++|+|+||-
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 3210 0 0111224568899999999999999999999999974
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-47 Score=373.90 Aligned_cols=259 Identities=29% Similarity=0.517 Sum_probs=220.9
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ....+.+.+|+.+++.+. ||||+++++++.+....|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcC-CCCceeeeeEEEcCCEEE
Confidence 34679999999999999999999999999999999975442 334577899999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
+||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEET
T ss_pred EEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEE---ccCCCEEEeeCCCccccCCC
Confidence 999999999999998877789999999999999999999999999999999999999 67789999999999765322
Q ss_pred ---CceecccCCCcccchhhhhh-c-CCCcchHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCccCCCCCCCCCCH
Q 008475 257 ---QIFTDVVGSPYYVAPEVLLK-H-YGPEADVWTAGVILYILLSGVPPFWAETQQ-GIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 257 ---~~~~~~~gt~~y~aPE~~~~-~-~~~~~DvwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.......|++.|+|||++.+ . ++.++|||||||++|+|++|..||...... ..+..+...... ...+..+++
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--LNPWKKIDS 236 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--STTGGGSCH
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--cCchhhcCH
Confidence 22345678999999999975 3 477899999999999999999999876543 233333333222 223456899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.+.+||.+||..||.+|||+.++++||||+...
T Consensus 237 ~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (276)
T 2yex_A 237 APLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (276)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence 999999999999999999999999999998654
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-47 Score=388.69 Aligned_cols=259 Identities=24% Similarity=0.364 Sum_probs=220.4
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+...++|++.+.||+|+||.||+|.+..++..||+|++.... .....+.+.+|+.+++.+. ||||+++++++.+...
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 105 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGE 105 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEETTE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCC-CCCEEEEeEEEEECCE
Confidence 345577999999999999999999999999999999997542 4566778999999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL-GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
+|+||||+++++|.+++...+.+++..+..++.||+.||.|||+. ||+||||||+|||+ +.++.+||+|||++...
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 106 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQL 182 (360)
T ss_dssp EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHH
T ss_pred EEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEE---CCCCCEEEEECCCCccc
Confidence 999999999999999999888999999999999999999999996 99999999999999 77789999999998754
Q ss_pred CCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--------------------
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDA-------------------- 312 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~-------------------- 312 (564)
... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.......+...
T Consensus 183 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 183 IDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp HHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred ccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 322 2345689999999999985 589999999999999999999999987665443222
Q ss_pred ----------------------HHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 313 ----------------------VLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 313 ----------------------i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+..... +..+...+++++.+||.+||..||.+|||+.++|+||||+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred CcccccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 222211 111223478999999999999999999999999999999863
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=393.24 Aligned_cols=254 Identities=28% Similarity=0.414 Sum_probs=210.1
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec------
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED------ 171 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~------ 171 (564)
...|++.+.||+|+||.||+|++..+++.||||++..... ...+|+++++.++ ||||++++++|..
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~-hpniv~l~~~~~~~~~~~~ 124 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKD 124 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCC-CTTBCCEEEEEEEEETTTT
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcC-CCCccceeeEEeccCCCCc
Confidence 3469999999999999999999999999999999865421 1236999999997 9999999999853
Q ss_pred CCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
...+++||||+++ +|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||+. .+.+.+||+||
T Consensus 125 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~--~~~~~~kl~DF 201 (420)
T 1j1b_A 125 EVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEE--TTTTEEEECCC
T ss_pred ceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe--CCCCeEEeccc
Confidence 2347799999965 66665542 46799999999999999999999999999999999999993 23467899999
Q ss_pred CCccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC---------
Q 008475 248 GLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG--------- 316 (564)
Q Consensus 248 G~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~--------- 316 (564)
|+++...........+||+.|+|||++.+ .|+.++|||||||++|||++|+.||.+.+..+.+..+.+.
T Consensus 202 G~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 202 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp TTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99987766555567789999999999974 5899999999999999999999999998876666555431
Q ss_pred --------CccCCC---C-----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 317 --------HIDFES---D-----PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 317 --------~~~~~~---~-----~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.+.++. . ..+.+++++.+||.+||..||.+|||+.|+|+||||...
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 011110 0 113468999999999999999999999999999999864
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=395.89 Aligned_cols=264 Identities=25% Similarity=0.443 Sum_probs=199.3
Q ss_pred ccccccceee-cccccccCCeEEEEEEEc--cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 94 TDNIRDLYTL-GRKLGQGQFGTTYLCTEI--ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 94 ~~~~~~~y~~-~~~lG~G~fg~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
...+.+.|++ +++||+|+||.||+|++. .+++.||||++..... ...+.+|+.+|+.++ ||||+++++++.
T Consensus 15 ~~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~-hpniv~~~~~~~ 88 (405)
T 3rgf_A 15 RERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELK-HPNVISLQKVFL 88 (405)
T ss_dssp CCCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCC-CTTBCCCCEEEE
T ss_pred hhhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcC-CCCeeeEeeEEe
Confidence 3456677887 568999999999999976 5688999999975432 235778999999997 999999999995
Q ss_pred --cCCeEEEEEeccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC-CC
Q 008475 171 --DSLCVHIVMELCAGGELFDRIIQR---------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK-DD 238 (564)
Q Consensus 171 --~~~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~-~~ 238 (564)
....+||||||+. ++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+... +.
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~ 167 (405)
T 3rgf_A 89 SHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPE 167 (405)
T ss_dssp ETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTT
T ss_pred cCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCC
Confidence 4788999999995 5888877532 249999999999999999999999999999999999999543 45
Q ss_pred CCcEEEeeCCCccccCCC----CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCH------
Q 008475 239 DFSLKAIDFGLSVFFKPG----QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQ------ 306 (564)
Q Consensus 239 ~~~~kl~DfG~~~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~------ 306 (564)
.+.+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+...
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~ 247 (405)
T 3rgf_A 168 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 247 (405)
T ss_dssp TTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------C
T ss_pred CCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccc
Confidence 679999999999876432 23345789999999999985 489999999999999999999999976543
Q ss_pred ---HHHHHHHHcCCccCCCCCC----------------------------------CCCCHHHHHHHHHhcccCCCCCCC
Q 008475 307 ---QGIFDAVLKGHIDFESDPW----------------------------------PLISDSAKDLIRKMLCSQPSERLT 349 (564)
Q Consensus 307 ---~~~~~~i~~~~~~~~~~~~----------------------------------~~~s~~~~~li~~~l~~dp~~R~s 349 (564)
.+.+..+...........| ...++.+.+||.+||.+||.+|||
T Consensus 248 ~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~t 327 (405)
T 3rgf_A 248 PYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT 327 (405)
T ss_dssp CCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCC
T ss_pred cchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCC
Confidence 2333333321111111111 123778999999999999999999
Q ss_pred HHHHhcCCCcCCCCC
Q 008475 350 AHEVLCHPWICENGV 364 (564)
Q Consensus 350 ~~~vl~hp~~~~~~~ 364 (564)
++|+|+||||.+...
T Consensus 328 a~e~L~hp~f~~~~~ 342 (405)
T 3rgf_A 328 SEQAMQDPYFLEDPL 342 (405)
T ss_dssp HHHHHTSGGGTSSSC
T ss_pred HHHHhcChhhccCCC
Confidence 999999999987544
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=375.41 Aligned_cols=257 Identities=26% Similarity=0.261 Sum_probs=199.2
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+..+...++.+. ||||+++++++.+....+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~-h~~iv~~~~~~~~~~~~~ 82 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVD-CPFTVTFYGALFREGDVW 82 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSSEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCC-CCeEEEEeeeeeccCCEE
Confidence 34679999999999999999999999999999999965431 2233333444445566665 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 177 IVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSL-GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
+||||++ |+|.+++.. ...+++..+..++.||+.||.|||++ ||+||||||+|||+ +.++.+||+|||++.
T Consensus 83 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~ 158 (290)
T 3fme_A 83 ICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGISG 158 (290)
T ss_dssp EEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE---CTTCCEEBCCC----
T ss_pred EEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecCCcc
Confidence 9999996 588776643 46799999999999999999999998 99999999999999 777899999999998
Q ss_pred ccCCCCceecccCCCcccchhhhh-----hcCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCccCCCCCC
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLL-----KHYGPEADVWTAGVILYILLSGVPPFWA-ETQQGIFDAVLKGHIDFESDPW 325 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~ 325 (564)
............||+.|+|||++. ..++.++|||||||++|+|++|..||.. ......+..+...... ..+.
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~ 236 (290)
T 3fme_A 159 YLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP--QLPA 236 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC--CCCT
T ss_pred cccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCC--Cccc
Confidence 776555555568999999999972 3588899999999999999999999976 3444444444333222 2223
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
..+++++.+||.+||..||.+|||+.++++||||+.
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~ 272 (290)
T 3fme_A 237 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272 (290)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred ccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence 468999999999999999999999999999999975
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-47 Score=384.21 Aligned_cols=266 Identities=39% Similarity=0.674 Sum_probs=194.0
Q ss_pred ccccceeecc-cccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec---
Q 008475 96 NIRDLYTLGR-KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--- 171 (564)
Q Consensus 96 ~~~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 171 (564)
.+.++|.+.+ .||+|+||.||+|.+..+++.||||++... . ...+|+..+.++.+||||+++++++..
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 96 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----P----KARQEVDHHWQASGGPHIVCILDVYENMHH 96 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----H----HHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----H----HHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence 3556799955 699999999999999999999999998642 1 223344444344459999999999976
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 172 -SLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 172 -~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
...+++|||||+||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||+..++..+.+||+|||
T Consensus 97 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 97 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp TEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred CCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 556899999999999999998754 69999999999999999999999999999999999999655556789999999
Q ss_pred CccccCCCCceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCccCCCC
Q 008475 249 LSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGI----FDAVLKGHIDFESD 323 (564)
Q Consensus 249 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~----~~~i~~~~~~~~~~ 323 (564)
++...... ......+|+.|+|||++. ..++.++|||||||++|+|++|..||........ ...+..+...++.+
T Consensus 177 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 177 FAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255 (336)
T ss_dssp TCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTT
T ss_pred cceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCch
Confidence 99875433 334567899999999986 4588999999999999999999999977665433 33344445555555
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCC
Q 008475 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSL 370 (564)
Q Consensus 324 ~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~ 370 (564)
.+..+++++.+||.+||..||.+|||+.++|+||||+.....+....
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~~~ 302 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 302 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSCCCBC
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccCCCCcc
Confidence 66789999999999999999999999999999999998655544433
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=376.50 Aligned_cols=259 Identities=26% Similarity=0.357 Sum_probs=212.8
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...++|++.+.||+|+||.||+|++ ++..||+|++..... .....+.+.+|+.++++++ ||||+++++++.+...+
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLR-HPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSTTCC
T ss_pred CChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCce
Confidence 3456799999999999999999986 688999999975543 5566778999999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 176 HIVMELCAGGELFDRIIQRGH---YSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
++||||+++++|.+++...+. +++..+..++.||+.||.|||++| |+||||||+|||+ +.++.+||+|||++
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll---~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLS 186 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE---CTTCCEEECCCC--
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE---eCCCcEEECCCCCC
Confidence 999999999999999976543 999999999999999999999999 9999999999999 77889999999999
Q ss_pred cccCCCC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 251 VFFKPGQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 251 ~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..+....+........ ....+
T Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~ 264 (309)
T 3p86_A 187 RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE--IPRNL 264 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCC--CCTTS
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--CCccC
Confidence 7654332 2345679999999999985 489999999999999999999999999988887777654333322 23568
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc--CCCcCCCC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLC--HPWICENG 363 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~--hp~~~~~~ 363 (564)
++++.+||.+||..||.+|||+.++++ +++++...
T Consensus 265 ~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 265 NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999988 56665543
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=376.78 Aligned_cols=257 Identities=25% Similarity=0.444 Sum_probs=215.2
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----- 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----- 171 (564)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ...+.+.+|+.+++++.+||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 4567999999999999999999999999999999986543 2345788999999999669999999999986
Q ss_pred -CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 172 -SLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 172 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
...+++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg 174 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFG 174 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEEECCCT
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE---cCCCCEEEeeCc
Confidence 56899999999999999999764 569999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCC-CceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC
Q 008475 249 LSVFFKPG-QIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE 321 (564)
Q Consensus 249 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 321 (564)
++...... .......||+.|+|||++. ..++.++|||||||++|+|++|..||...........+......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-- 252 (326)
T 2x7f_A 175 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP-- 252 (326)
T ss_dssp TTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC--
T ss_pred CceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc--
Confidence 98865432 2234567899999999985 35889999999999999999999999988877766666554332
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 322 SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 322 ~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
......+++.+.+||.+||..||.+|||+.++++||||...
T Consensus 253 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 293 (326)
T 2x7f_A 253 RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293 (326)
T ss_dssp CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence 22235689999999999999999999999999999999863
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=373.96 Aligned_cols=261 Identities=27% Similarity=0.421 Sum_probs=219.0
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..+.++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++.+. ||||+++++++.....
T Consensus 15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 90 (302)
T 2j7t_A 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCD-HPYIVKLLGAYYHDGK 90 (302)
T ss_dssp SCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCC-CTTBCCEEEEEECC-C
T ss_pred cCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC---CHHHHHHHHHHHHHHhcCC-CCCEeeeeeeeeeCCe
Confidence 34667899999999999999999999999999999998654 2345678889999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 91 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 91 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM---TLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTSCEEECCCHHHHHH
T ss_pred EEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---CCCCCEEEEECCCCccc
Confidence 9999999999999998865 4679999999999999999999999999999999999999 77789999999987542
Q ss_pred CC-CCceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 254 KP-GQIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 254 ~~-~~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
.. ........||+.|+|||++. ..++.++|||||||++|+|++|..||...+.......+..+..... ....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~ 246 (302)
T 2j7t_A 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL-LTPS 246 (302)
T ss_dssp HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-SSGG
T ss_pred cccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCccc-CCcc
Confidence 21 11223457899999999984 3488899999999999999999999999888777777666543221 1224
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.++..+.+||.+||..||.+|||+.++++||||....
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 283 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT 283 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence 5789999999999999999999999999999998643
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-47 Score=391.94 Aligned_cols=258 Identities=17% Similarity=0.147 Sum_probs=199.6
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc-CCCCccEEE-------EEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA-GHKNIVTIK-------GAY 169 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~niv~~~-------~~~ 169 (564)
...|++.+.||+|+||.||+|.+..+++.||||++...........+.+.+|+.+++.|+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 344999999999999999999999999999999998765545566778888966666654 499988755 555
Q ss_pred ecC-----------------CeEEEEEeccCCCchHHHHHhc-CCCCHHHH------HHHHHHHHHHHHHHHHCCCEeec
Q 008475 170 EDS-----------------LCVHIVMELCAGGELFDRIIQR-GHYSERKA------AELTRIIVGVVEACHSLGVMHRD 225 (564)
Q Consensus 170 ~~~-----------------~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~------~~i~~qi~~~l~~lH~~~iiH~D 225 (564)
... ..+|||||||+ |+|.+++... ..+++... ..++.||+.||.|||++||+|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 433 34899999997 8999999764 33444555 67779999999999999999999
Q ss_pred CCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCC
Q 008475 226 LKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFW 302 (564)
Q Consensus 226 lkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~ 302 (564)
|||+|||+ +.++.+||+|||++..... ......+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.
T Consensus 220 ikp~NIll---~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 220 FTPDNLFI---MPDGRLMLGDVSALWKVGT--RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp CSGGGEEE---CTTSCEEECCGGGEEETTC--EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CCHHHEEE---CCCCCEEEEecceeeecCC--CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 99999999 7788999999999987542 2335667799999999974 58999999999999999999999997
Q ss_pred CCCHHHH--HHH---HHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 303 AETQQGI--FDA---VLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 303 ~~~~~~~--~~~---i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+...... ... .......+..+.++.+++.+.+||.+||+.||++|||+.++|+||||++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 358 (371)
T 3q60_A 295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358 (371)
T ss_dssp BCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred CcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence 7643211 000 1111222233334578999999999999999999999999999999975
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=382.74 Aligned_cols=252 Identities=25% Similarity=0.397 Sum_probs=217.7
Q ss_pred cccceeecccccccCCeEEEEEEEc-------cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEI-------ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
..++|++.+.||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++.+.+||||+++++++
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 156 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 3467999999999999999999975 345679999996542 4556778999999999995599999999999
Q ss_pred ecCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEe
Q 008475 170 EDSLCVHIVMELCAGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLL 233 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll 233 (564)
.....+|+||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 236 (370)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE
Confidence 99999999999999999999997653 47899999999999999999999999999999999999
Q ss_pred ecCCCCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 008475 234 VNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQG 308 (564)
Q Consensus 234 ~~~~~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~ 308 (564)
+.++.+||+|||++....... ......+|+.|+|||++.+ .++.++|||||||++|||++ |..||.+....+
T Consensus 237 ---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~ 313 (370)
T 2psq_A 237 ---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313 (370)
T ss_dssp ---CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred ---CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 778899999999998654432 2233567789999999975 58999999999999999999 999999988888
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+...+..+... .....+++++.+||.+||..||.+|||+.+++++
T Consensus 314 ~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 314 LFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp HHHHHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 88887776432 2234689999999999999999999999999864
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=375.86 Aligned_cols=259 Identities=27% Similarity=0.467 Sum_probs=220.0
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC-CHHhHHHHHHHHHHHHhhcCCCCccEEEEEE--ecCC
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI-SREDVEDVRREIQIMHHLAGHKNIVTIKGAY--EDSL 173 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~--~~~~ 173 (564)
+.++|++.+.||+|+||.||+|.+..++..||+|++...... .....+.+.+|+.+++.++ ||||+++++++ .+..
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-HKNVIQLVDVLYNEEKQ 81 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECC---
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcC-CCCeeEEEEEEEcCCCC
Confidence 345799999999999999999999999999999999754321 1234567899999999997 99999999998 4556
Q ss_pred eEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 174 CVHIVMELCAGGELFDRIIQ--RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
..|+||||++++ |.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~---~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL---TTGGTLKISALGVAE 157 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCE
T ss_pred eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---cCCCcEEeecccccc
Confidence 899999999765 7777765 4569999999999999999999999999999999999999 777899999999998
Q ss_pred ccCC---CCceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCC
Q 008475 252 FFKP---GQIFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW 325 (564)
Q Consensus 252 ~~~~---~~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 325 (564)
.... ........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+.++...++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---- 233 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP---- 233 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC----
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC----
Confidence 7643 223345678999999999974 247799999999999999999999999998888888887765443
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
..+++.+.+||.+||..||.+|||+.++++||||.....
T Consensus 234 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 234 GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 358899999999999999999999999999999987543
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=376.31 Aligned_cols=262 Identities=24% Similarity=0.374 Sum_probs=218.6
Q ss_pred cccceeecccccccCCeEEEEEEEc-cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc--CCCCccEEEEEEe---
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEI-ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA--GHKNIVTIKGAYE--- 170 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~--- 170 (564)
..++|++.+.||+|+||.||+|.+. .+++.||+|++..... .......+.+|+.+++.+. +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBC-TTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcc-cccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3467999999999999999999985 6788999999875432 1222234567888887774 4999999999987
Q ss_pred --cCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEee
Q 008475 171 --DSLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAID 246 (564)
Q Consensus 171 --~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~D 246 (564)
.....++||||+. |+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili---~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE---cCCCCEEEec
Confidence 5678999999996 69999987753 49999999999999999999999999999999999999 7778999999
Q ss_pred CCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc-----C
Q 008475 247 FGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID-----F 320 (564)
Q Consensus 247 fG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-----~ 320 (564)
||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+...... +
T Consensus 164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243 (326)
T ss_dssp CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred CcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence 999987655444556789999999999974 5899999999999999999999999998887777666532110 0
Q ss_pred C------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 321 E------------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 321 ~------------------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
+ ......+++.+.+||.+||..||.+|||+.++|+||||....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 304 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence 0 012245889999999999999999999999999999998754
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=369.54 Aligned_cols=257 Identities=27% Similarity=0.466 Sum_probs=222.6
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe--cCCeE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE--DSLCV 175 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~--~~~~~ 175 (564)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.++++++ ||||+++++++. ....+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcC-CCCCCeEEEEEecCCCceE
Confidence 3569999999999999999999999999999999976543 4556778999999999997 999999999874 46789
Q ss_pred EEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-----CEeecCCCCcEEeecCCCCCcEEEee
Q 008475 176 HIVMELCAGGELFDRIIQR----GHYSERKAAELTRIIVGVVEACHSLG-----VMHRDLKPENFLLVNKDDDFSLKAID 246 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~-----iiH~Dlkp~NIll~~~~~~~~~kl~D 246 (564)
++||||+++++|.+++... ..+++..+..++.||+.||.|||++| |+||||||+|||+ +.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~---~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE---CSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE---cCCCCEEEec
Confidence 9999999999999998753 34999999999999999999999999 9999999999999 7788999999
Q ss_pred CCCccccCCCC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCC
Q 008475 247 FGLSVFFKPGQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP 324 (564)
Q Consensus 247 fG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 324 (564)
||++....... ......|++.|+|||++.+ .++.++|||||||++|+|++|..||......++...+..+.... .
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~ 236 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---I 236 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC---C
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccccc---C
Confidence 99998765432 2234678999999999985 58999999999999999999999999998888888887775432 2
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 325 WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 325 ~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
...+++++.+||.+||..||.+|||+.++++|+|+...
T Consensus 237 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 237 PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 23589999999999999999999999999999999864
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=385.12 Aligned_cols=259 Identities=28% Similarity=0.440 Sum_probs=216.3
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
...+.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++ ||||+++++++....
T Consensus 37 ~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 114 (371)
T 4exu_A 37 AWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPAS 114 (371)
T ss_dssp EEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCS
T ss_pred eecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcC-CCCchhhhhheeccC
Confidence 3446678999999999999999999999999999999997543 34556778899999999997 999999999998766
Q ss_pred eE------EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 174 CV------HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 174 ~~------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
.. |+||||+. ++|.+.+ ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+||
T Consensus 115 ~~~~~~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kL~Df 188 (371)
T 4exu_A 115 SLRNFYDFYLVMPFMQ-TDLQKIM--GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDF 188 (371)
T ss_dssp SSTTCCCCEEEEECCC-EEHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECST
T ss_pred CcccceeEEEEEcccc-ccHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE---CCCCCEEEEec
Confidence 54 99999996 6887776 3459999999999999999999999999999999999999 77889999999
Q ss_pred CCccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC-----
Q 008475 248 GLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF----- 320 (564)
Q Consensus 248 G~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~----- 320 (564)
|++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.+.....
T Consensus 189 g~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 189 GLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp TCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred Cccccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHH
Confidence 99986543 3455788999999999975 58999999999999999999999999988777666654311000
Q ss_pred ------------------CC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 321 ------------------ES----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 321 ------------------~~----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.. ..++.+++.+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 330 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence 00 0123578999999999999999999999999999999864
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=375.73 Aligned_cols=260 Identities=28% Similarity=0.425 Sum_probs=199.2
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+.+|+.+++.++ ||||+++++++......++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQAMSQCH-HPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCC-CTTBCCEEEEEESSSCEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh--cchhHHHHHHHHHHHhhcC-CCCEeeEEEEEeecCCcEE
Confidence 456999999999999999999998899999999986543 2334567889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 178 VMELCAGGELFDRIIQ--------RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
||||+++++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE---cCCCCEEEEeccc
Confidence 9999999999998864 4568999999999999999999999999999999999999 7778999999999
Q ss_pred ccccCCCC------ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC
Q 008475 250 SVFFKPGQ------IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE 321 (564)
Q Consensus 250 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 321 (564)
+....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||....................
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 247 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence 87654321 2234678999999999874 589999999999999999999999988877666655554432211
Q ss_pred ------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 322 ------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 322 ------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
......+++++.+||.+||..||.+|||+.++++||||....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 295 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence 122356789999999999999999999999999999998643
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=390.35 Aligned_cols=260 Identities=23% Similarity=0.443 Sum_probs=224.2
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHH--------------hHHHHHHHHHHHHhhcCCCC
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE--------------DVEDVRREIQIMHHLAGHKN 161 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~--------------~~~~~~~E~~~l~~l~~h~n 161 (564)
.+.++|++.+.||+|+||.||+|.+ +++.||+|++......... ..+.+.+|+.++++++ |||
T Consensus 28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~ 104 (348)
T 2pml_X 28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEY 104 (348)
T ss_dssp EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC-CTT
T ss_pred cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC-CCC
Confidence 3456799999999999999999998 8999999999754322211 1278899999999997 999
Q ss_pred ccEEEEEEecCCeEEEEEeccCCCchHHH------HHh--cCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEE
Q 008475 162 IVTIKGAYEDSLCVHIVMELCAGGELFDR------IIQ--RGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFL 232 (564)
Q Consensus 162 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~------l~~--~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIl 232 (564)
|+++++++.+....++||||+++++|.++ +.. ...+++..+..++.||+.||.|||+ +||+||||||+|||
T Consensus 105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL 184 (348)
T ss_dssp BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence 99999999999999999999999999988 655 5679999999999999999999999 99999999999999
Q ss_pred eecCCCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhhc--CCC-cchHHHHHHHHHHHHhCCCCCCCCCH-HH
Q 008475 233 LVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH--YGP-EADVWTAGVILYILLSGVPPFWAETQ-QG 308 (564)
Q Consensus 233 l~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~-~~DvwSlG~il~elltg~~pf~~~~~-~~ 308 (564)
+ +.++.+||+|||++...... ......|++.|+|||++.+. ++. ++|||||||++|+|++|..||..... .+
T Consensus 185 ~---~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 260 (348)
T 2pml_X 185 M---DKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE 260 (348)
T ss_dssp E---CTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred E---cCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence 9 77889999999999876443 44567899999999999853 555 99999999999999999999988776 77
Q ss_pred HHHHHHcCCccCCCCC---------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 309 IFDAVLKGHIDFESDP---------------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~---------------~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
....+..+...++... ...+++++.+||.+||..||.+|||+.++++||||...
T Consensus 261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 8888877766554221 14589999999999999999999999999999999863
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-46 Score=377.64 Aligned_cols=262 Identities=29% Similarity=0.420 Sum_probs=217.6
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS-- 172 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 172 (564)
..+.++|++.+.||+|+||.||+|.+..+|+.||||++... ........+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 83 (353)
T 2b9h_A 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFK-HENIITIFNIQRPDSF 83 (353)
T ss_dssp CCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCS
T ss_pred cccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCc-CCCcCCeeeeeccccc
Confidence 34667899999999999999999999999999999999643 24556677889999999997 99999999988654
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
...|+||||+. ++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 84 ~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 84 ENFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGL 158 (353)
T ss_dssp TTCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTT
T ss_pred CccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---cCCCcEEEEeccc
Confidence 67999999995 689888765 579999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCC-----------ceecccCCCcccchhhhh--hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 008475 250 SVFFKPGQ-----------IFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG 316 (564)
Q Consensus 250 ~~~~~~~~-----------~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~ 316 (564)
+....... .....+||+.|+|||++. ..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 238 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 98754321 122357899999999886 35889999999999999999999999988876555444321
Q ss_pred --Cc----------------------cCCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 317 --HI----------------------DFES----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 317 --~~----------------------~~~~----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
.. ..+. ..++.+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 314 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCC
Confidence 00 0000 012468899999999999999999999999999999987543
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-46 Score=376.59 Aligned_cols=261 Identities=29% Similarity=0.416 Sum_probs=216.7
Q ss_pred cccccccceeecccccccCCeEEEEEEE-ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCC------CccEE
Q 008475 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTE-IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK------NIVTI 165 (564)
Q Consensus 93 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~------niv~~ 165 (564)
..+.+.++|++.+.||+|+||.||+|.+ ..+++.||+|++.. .....+.+.+|+.+++.+. |+ +|+++
T Consensus 8 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~e~~~l~~l~-~~~~~~~~~i~~~ 82 (339)
T 1z57_A 8 SGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN----VDRYCEAARSEIQVLEHLN-TTDPNSTFRCVQM 82 (339)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS----SHHHHHHHHHHHHHHHHHH-HHCTTCTTCBCCE
T ss_pred cCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec----CCchhHHHHHHHHHHHHhh-hcCCCCceeeEee
Confidence 3455678899999999999999999998 56889999999864 2445677889999999987 55 49999
Q ss_pred EEEEecCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC-----
Q 008475 166 KGAYEDSLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD----- 238 (564)
Q Consensus 166 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~----- 238 (564)
++++.....+|+||||+ +++|.+++...+ ++++..+..++.||+.||.|||++||+||||||+|||+...+.
T Consensus 83 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~ 161 (339)
T 1z57_A 83 LEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN 161 (339)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred ecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccC
Confidence 99999999999999999 889999998765 6899999999999999999999999999999999999943211
Q ss_pred -----------CCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH
Q 008475 239 -----------DFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ 306 (564)
Q Consensus 239 -----------~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~ 306 (564)
++.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.
T Consensus 162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 162 PKIKRDERTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp ----CEEEEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred CccccccccccCCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 56799999999987543 2345689999999999985 589999999999999999999999998887
Q ss_pred HHHHHHHHcCCccCCC----------------------------------------CCCCCCCHHHHHHHHHhcccCCCC
Q 008475 307 QGIFDAVLKGHIDFES----------------------------------------DPWPLISDSAKDLIRKMLCSQPSE 346 (564)
Q Consensus 307 ~~~~~~i~~~~~~~~~----------------------------------------~~~~~~s~~~~~li~~~l~~dp~~ 346 (564)
.+....+.+.....+. ......++++.+||.+||..||.+
T Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 6655544321111000 001123567899999999999999
Q ss_pred CCCHHHHhcCCCcCC
Q 008475 347 RLTAHEVLCHPWICE 361 (564)
Q Consensus 347 R~s~~~vl~hp~~~~ 361 (564)
|||+.|+|+||||+.
T Consensus 320 Rpt~~ell~hp~f~~ 334 (339)
T 1z57_A 320 RITLREALKHPFFDL 334 (339)
T ss_dssp SCCHHHHTTSGGGGG
T ss_pred ccCHHHHhcCHHHHH
Confidence 999999999999986
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=377.15 Aligned_cols=264 Identities=28% Similarity=0.413 Sum_probs=214.3
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe----
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE---- 170 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~---- 170 (564)
..+.++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++.++ ||||+++++++.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~ 82 (320)
T 2i6l_A 7 FDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLD-HDNIVKVFEILGPSGS 82 (320)
T ss_dssp EEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECTTSC
T ss_pred CccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcC-CCCeeEEEEecccccc
Confidence 35667899999999999999999999999999999998643 4566778899999999997 999999999874
Q ss_pred ----------cCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCC
Q 008475 171 ----------DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240 (564)
Q Consensus 171 ----------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~ 240 (564)
.....|+||||++ |+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||+. ..++
T Consensus 83 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~ 158 (320)
T 2i6l_A 83 QLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN--TEDL 158 (320)
T ss_dssp BCCC----CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE--TTTT
T ss_pred ccccccccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc--CCCC
Confidence 4468999999996 699888754 6799999999999999999999999999999999999994 2457
Q ss_pred cEEEeeCCCccccCCC----CceecccCCCcccchhhhh--hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 008475 241 SLKAIDFGLSVFFKPG----QIFTDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL 314 (564)
Q Consensus 241 ~~kl~DfG~~~~~~~~----~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~ 314 (564)
.+||+|||++...... .......+|+.|+|||++. ..++.++|||||||++|+|++|+.||.+....+....+.
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 8999999999875432 1233456799999999886 358999999999999999999999999988777666655
Q ss_pred cCCccC----------------------CC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCC
Q 008475 315 KGHIDF----------------------ES----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAP 366 (564)
Q Consensus 315 ~~~~~~----------------------~~----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~ 366 (564)
...... +. ...+.+++++.+||.+||..||.+|||+.++|+||||+....+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPM 316 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence 432110 00 01245899999999999999999999999999999998765443
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=383.89 Aligned_cols=260 Identities=24% Similarity=0.299 Sum_probs=221.4
Q ss_pred cccccceeecccccccCCeEEEEEE-----EccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCT-----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
+...++|++.+.||+|+||.||+|. +..++..||||++... ........+.+|+.+++++. ||||+++++++
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~ 143 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFN-HQNIVRCIGVS 143 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEE
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc--cChhhHHHHHHHHHHHHhCC-CCCCCeEEEEE
Confidence 3445679999999999999999999 4557789999998643 24556667889999999997 99999999999
Q ss_pred ecCCeEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcE
Q 008475 170 EDSLCVHIVMELCAGGELFDRIIQRG-------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSL 242 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~ 242 (564)
......++|||||++|+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||+..++.+..+
T Consensus 144 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999999997653 48999999999999999999999999999999999999544455679
Q ss_pred EEeeCCCccccCC---CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 008475 243 KAIDFGLSVFFKP---GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGH 317 (564)
Q Consensus 243 kl~DfG~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~ 317 (564)
||+|||++..... ........+|+.|+|||++.+ .++.++|||||||++|||++ |..||......++...+..+.
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~ 303 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 303 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999975421 122344668899999999874 59999999999999999998 999999999998888888765
Q ss_pred ccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 318 ~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
... ....+++.+.+||.+||+.||.+|||+.+|++|.++.
T Consensus 304 ~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 304 RMD---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC---CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 332 2346899999999999999999999999999997765
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-46 Score=371.80 Aligned_cols=257 Identities=26% Similarity=0.450 Sum_probs=216.0
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...+.|++.+.||+|+||.||+|.+..+|+.||+|++.... ..+.+.+|+.+++.+. ||||+++++++.....+
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 99 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDL 99 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEE
Confidence 45567999999999999999999999999999999997542 2456889999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRII-QRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|+||||+++++|.+++. ....+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECB
T ss_pred EEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE---CCCCCEEEeecccchhhh
Confidence 99999999999999986 45679999999999999999999999999999999999999 777899999999997654
Q ss_pred CC-CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 255 PG-QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 255 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.. .......|++.|+|||++.+ .++.++|||||||++|+|++|..||...........+...... .......+++.+
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 255 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP-TFRKPELWSDNF 255 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-CCSSGGGSCHHH
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCc-ccCCcccCCHHH
Confidence 33 22345678999999999985 5899999999999999999999999888776665555443221 111224578999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.+||.+||..||.+|||+.++|+||||...
T Consensus 256 ~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~ 285 (314)
T 3com_A 256 TDFVKQCLVKSPEQRATATQLLQHPFVRSA 285 (314)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred HHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence 999999999999999999999999999864
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=372.88 Aligned_cols=250 Identities=22% Similarity=0.328 Sum_probs=215.5
Q ss_pred cccceeecccccccCCeEEEEEEEccCCc---EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGI---EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
..++|++.+.||+|+||.||+|.+..++. .||||++.... .....+.+.+|+.+++.++ ||||+++++++.+..
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 123 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRGR 123 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECGGG
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCC
Confidence 34679999999999999999999986655 49999996542 4556678999999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 174 CVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
..|+||||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRV 200 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCSSCEE
T ss_pred ccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---CCCCCEEECCCCcccc
Confidence 999999999999999999654 579999999999999999999999999999999999999 7788999999999987
Q ss_pred cCCCC----ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 253 FKPGQ----IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 253 ~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
..... ......+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....++...+..+... +...
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~ 277 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL---PAPM 277 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCC---CCCT
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCC---CCCC
Confidence 64332 1223445778999999984 69999999999999999999 99999999998888888776322 2234
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+++.+.+||.+||..||.+|||+.++++
T Consensus 278 ~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 278 GCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 68999999999999999999999999876
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=382.27 Aligned_cols=258 Identities=28% Similarity=0.397 Sum_probs=202.6
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC----
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL---- 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---- 173 (564)
.++|++.+.||+|+||.||+|++..+++.||||++..... ......+|+..+..+. ||||+++++++....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~~ 96 (360)
T 3e3p_A 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR----FRNRELQIMQDLAVLH-HPNIVQLQSYFYTLGERDR 96 (360)
T ss_dssp HTTEEEC----------CEEEEETTTCCEEEEEEEECCTT----CCCHHHHHHHHHHHHC-CTTBCCEEEEEEEECSSCT
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc----ccHHHHHHHHHHHhcC-CCCcccHHHhhhccccccc
Confidence 3569999999999999999999999999999999865432 2234567788888886 999999999996533
Q ss_pred ---eEEEEEeccCCCchHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHH--HCCCEeecCCCCcEEeecCCCCCcEEE
Q 008475 174 ---CVHIVMELCAGGELFDRI----IQRGHYSERKAAELTRIIVGVVEACH--SLGVMHRDLKPENFLLVNKDDDFSLKA 244 (564)
Q Consensus 174 ---~~~lv~e~~~~~~L~~~l----~~~~~~~~~~~~~i~~qi~~~l~~lH--~~~iiH~Dlkp~NIll~~~~~~~~~kl 244 (564)
.+++||||+++ +|...+ .....+++..+..++.||+.||.||| ++||+||||||+|||+. ..++.+||
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~--~~~~~~kl 173 (360)
T 3e3p_A 97 RDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EADGTLKL 173 (360)
T ss_dssp TCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEE--TTTTEEEE
T ss_pred cceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEe--CCCCcEEE
Confidence 38999999976 554433 34567899999999999999999999 99999999999999993 23679999
Q ss_pred eeCCCccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC-
Q 008475 245 IDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE- 321 (564)
Q Consensus 245 ~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~- 321 (564)
+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+.+......
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 253 (360)
T 3e3p_A 174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253 (360)
T ss_dssp CCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred eeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCH
Confidence 99999998776666667789999999999864 389999999999999999999999999888777766654211000
Q ss_pred ---------------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 322 ---------------------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 322 ---------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
......+++++.+||.+||+.||.+|||+.|+|+||||+...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred HHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 011122578999999999999999999999999999999754
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-46 Score=369.15 Aligned_cols=254 Identities=27% Similarity=0.440 Sum_probs=212.7
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----- 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----- 171 (564)
+.++|++.+.||+|+||.||+|++..+++.||||++.. .....+.+.+|+.+++.+. ||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLN-HQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE----EHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec----cHHHHHHHHHHHHHHHhcC-chHHHHHHHHHHhhcchh
Confidence 45679999999999999999999999999999999964 3455678899999999997 9999999998865
Q ss_pred --------CCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcE
Q 008475 172 --------SLCVHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSL 242 (564)
Q Consensus 172 --------~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~ 242 (564)
....|+||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~---~~~~~~ 155 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNV 155 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCE
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE---cCCCCE
Confidence 457899999999999999997644 57889999999999999999999999999999999999 778899
Q ss_pred EEeeCCCccccCCC---------------CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCC-C
Q 008475 243 KAIDFGLSVFFKPG---------------QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWA-E 304 (564)
Q Consensus 243 kl~DfG~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~-~ 304 (564)
||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++ ||.. .
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~ 232 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM 232 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence 99999999765421 22345678999999999974 58999999999999999998 5543 3
Q ss_pred CHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 305 TQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 305 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
........+......++......+++.+.+||.+||..||.+|||+.++++||||..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (303)
T 1zy4_A 233 ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289 (303)
T ss_dssp HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence 344566666666666665555677889999999999999999999999999999975
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=387.17 Aligned_cols=261 Identities=23% Similarity=0.388 Sum_probs=209.3
Q ss_pred cccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc-------CCCCccEE
Q 008475 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA-------GHKNIVTI 165 (564)
Q Consensus 93 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-------~h~niv~~ 165 (564)
..+.+.++|++.+.||+|+||+||+|++..+++.||||++.. .....+.+.+|+.+++.++ +||||+++
T Consensus 31 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~ 106 (397)
T 1wak_A 31 IGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS----AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQL 106 (397)
T ss_dssp TTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCE
T ss_pred hhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec----CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeee
Confidence 344566789999999999999999999999999999999964 3445677889999999996 27889999
Q ss_pred EEEEe----cCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEeecCC-
Q 008475 166 KGAYE----DSLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSL-GVMHRDLKPENFLLVNKD- 237 (564)
Q Consensus 166 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~Dlkp~NIll~~~~- 237 (564)
++++. ....+|+||||+ +++|.+.+... +.+++..++.++.||+.||.|||++ ||+||||||+|||+..++
T Consensus 107 ~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 107 LDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp EEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHH
T ss_pred ecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccch
Confidence 99997 567899999999 66777777654 4699999999999999999999998 999999999999994221
Q ss_pred ---------------------------------------------CCCcEEEeeCCCccccCCCCceecccCCCcccchh
Q 008475 238 ---------------------------------------------DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPE 272 (564)
Q Consensus 238 ---------------------------------------------~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE 272 (564)
....+||+|||++...... ....+||+.|+|||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE 263 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHH
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCCh
Confidence 1137999999999875432 45568999999999
Q ss_pred hhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHc--CC----------ccC---C---------
Q 008475 273 VLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ------QGIFDAVLK--GH----------IDF---E--------- 321 (564)
Q Consensus 273 ~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~------~~~~~~i~~--~~----------~~~---~--------- 321 (564)
++.+ .++.++|||||||++|+|++|+.||...+. ...+..+.+ +. ... .
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT 343 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccc
Confidence 9985 499999999999999999999999976542 222222211 10 000 0
Q ss_pred -C-------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 322 -S-------------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 322 -~-------------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
. ......++.+.+||.+||+.||++|||+.|||+||||+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 344 KLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp CCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred ccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 0 00112346788999999999999999999999999996
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=377.08 Aligned_cols=258 Identities=28% Similarity=0.443 Sum_probs=215.1
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe-
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC- 174 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~- 174 (564)
.+.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++ ||||+++++++.....
T Consensus 21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 98 (353)
T 3coi_A 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASSL 98 (353)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSG
T ss_pred ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCcccHhheEeccccc
Confidence 35677999999999999999999999999999999997543 34556678899999999997 9999999999987653
Q ss_pred -----EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 175 -----VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 175 -----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
+|+||||+. ++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 99 ~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 99 RNFYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGL 172 (353)
T ss_dssp GGCCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTCCEEECSTTC
T ss_pred ccceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE---CCCCcEEEeeccc
Confidence 599999996 68887663 359999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc---------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI--------- 318 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~--------- 318 (564)
+..... ......+|+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+.+...
T Consensus 173 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 173 ARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp TTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred ccCCCC--CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 986543 2345678999999999875 589999999999999999999999998887766655543110
Q ss_pred --------------cC----CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 319 --------------DF----ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 319 --------------~~----~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.. ....++.+++++.+||.+||..||.+|||+.++|+||||....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 313 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence 00 0112346799999999999999999999999999999998643
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-46 Score=381.32 Aligned_cols=261 Identities=25% Similarity=0.349 Sum_probs=208.4
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC--------CHHhHHHHHHHHHHHHhhcCCCCccEEEE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI--------SREDVEDVRREIQIMHHLAGHKNIVTIKG 167 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~~E~~~l~~l~~h~niv~~~~ 167 (564)
.+.++|++.+.||+|+||.||+|.+.. +..||||++...... .....+.+.+|+.++++++ ||||+++++
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~ 96 (362)
T 3pg1_A 19 AMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH-HPNILGLRD 96 (362)
T ss_dssp HTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC-CTTBCCCSE
T ss_pred HhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC-CcCccceee
Confidence 456779999999999999999999754 899999998654321 2334578999999999997 999999999
Q ss_pred EEe-----cCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCc
Q 008475 168 AYE-----DSLCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS 241 (564)
Q Consensus 168 ~~~-----~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~ 241 (564)
++. ....+|+||||+. |+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~~~~~ 172 (362)
T 3pg1_A 97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADNND 172 (362)
T ss_dssp EEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCC
T ss_pred eEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE---cCCCC
Confidence 984 3457899999996 6888877654 469999999999999999999999999999999999999 77789
Q ss_pred EEEeeCCCccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc
Q 008475 242 LKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID 319 (564)
Q Consensus 242 ~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~ 319 (564)
+||+|||++.............+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+......
T Consensus 173 ~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 252 (362)
T 3pg1_A 173 ITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252 (362)
T ss_dssp EEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence 99999999987655555566789999999999874 5899999999999999999999999998877766665431100
Q ss_pred ------------------------CCCC----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 320 ------------------------FESD----PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 320 ------------------------~~~~----~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.+.. ..+.+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 323 (362)
T 3pg1_A 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323 (362)
T ss_dssp CCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred CChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence 0000 123468899999999999999999999999999999875
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-46 Score=373.15 Aligned_cols=260 Identities=22% Similarity=0.337 Sum_probs=199.9
Q ss_pred cccceeecccccccCCeEEEEEEEccCCc---EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGI---EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
..++|++.+.||+|+||.||+|.+..++. .||||++..... .....+.+.+|+.++++++ ||||+++++++....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFD-HPHVAKLVGVSLRSR 98 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCC-CTTBCCCCEEEECC-
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCC-CCceehhhceeeccc
Confidence 34669999999999999999999877665 899999975433 3345678999999999996 999999999998776
Q ss_pred eE------EEEEeccCCCchHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCc
Q 008475 174 CV------HIVMELCAGGELFDRIIQRG------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS 241 (564)
Q Consensus 174 ~~------~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~ 241 (564)
.. ++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli---~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML---AEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE---cCCCC
Confidence 55 99999999999999986543 58999999999999999999999999999999999999 77789
Q ss_pred EEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcC
Q 008475 242 LKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKG 316 (564)
Q Consensus 242 ~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~ 316 (564)
+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+..+
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~ 255 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG 255 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC
Confidence 99999999987644332 223456778999999985 58999999999999999999 99999998888888888766
Q ss_pred CccCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-------HHHHhcCCCcCCCCC
Q 008475 317 HIDFESDPWPLISDSAKDLIRKMLCSQPSERLT-------AHEVLCHPWICENGV 364 (564)
Q Consensus 317 ~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s-------~~~vl~hp~~~~~~~ 364 (564)
.... ....+++++.+||.+||..||.+||| +++++.|||+.....
T Consensus 256 ~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~ 307 (323)
T 3qup_A 256 NRLK---QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ 307 (323)
T ss_dssp CCCC---CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--------
T ss_pred CCCC---CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCC
Confidence 5322 23468899999999999999999999 788899999987543
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=376.03 Aligned_cols=263 Identities=27% Similarity=0.397 Sum_probs=216.8
Q ss_pred cccccccceeecccccccCCeEEEEEEEccCC-cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCC------ccEE
Q 008475 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATG-IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN------IVTI 165 (564)
Q Consensus 93 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n------iv~~ 165 (564)
..+.+.++|++.+.||+|+||.||+|.+..++ ..||+|++.. .....+.+.+|+.+++.+. |++ ++.+
T Consensus 13 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~ 87 (355)
T 2eu9_A 13 IGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN----VGKYREAARLEINVLKKIK-EKDKENKFLCVLM 87 (355)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHHH-HHCTTSCSCBCCE
T ss_pred cCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc----cccchhHHHHHHHHHHHHh-hcCCCCceeEEEe
Confidence 44557788999999999999999999998777 6899999964 2445677889999999997 655 9999
Q ss_pred EEEEecCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC-------
Q 008475 166 KGAYEDSLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK------- 236 (564)
Q Consensus 166 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~------- 236 (564)
++++.....+||||||+ +++|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||+...
T Consensus 88 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~ 166 (355)
T 2eu9_A 88 SDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYN 166 (355)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred eeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccc
Confidence 99999999999999999 677778776653 69999999999999999999999999999999999999432
Q ss_pred ---------CCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH
Q 008475 237 ---------DDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ 306 (564)
Q Consensus 237 ---------~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~ 306 (564)
+..+.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.....
T Consensus 167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 167 EHKSCEEKSVKNTSIRVADFGSATFDHE--HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp CC-CCCEEEESCCCEEECCCTTCEETTS--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccCCCcEEEeecCccccccc--cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 2467899999999986443 2345689999999999975 599999999999999999999999998887
Q ss_pred HHHHHHHHcCCccCCC----------------------------------------CCCCCCCHHHHHHHHHhcccCCCC
Q 008475 307 QGIFDAVLKGHIDFES----------------------------------------DPWPLISDSAKDLIRKMLCSQPSE 346 (564)
Q Consensus 307 ~~~~~~i~~~~~~~~~----------------------------------------~~~~~~s~~~~~li~~~l~~dp~~ 346 (564)
.+.+..+.+.....+. ......+.++.+||.+||..||.+
T Consensus 245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 6655544332111100 000112457899999999999999
Q ss_pred CCCHHHHhcCCCcCCCC
Q 008475 347 RLTAHEVLCHPWICENG 363 (564)
Q Consensus 347 R~s~~~vl~hp~~~~~~ 363 (564)
|||+.++|+||||+...
T Consensus 325 Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 325 RITLAEALLHPFFAGLT 341 (355)
T ss_dssp SCCHHHHTTSGGGGGCC
T ss_pred CcCHHHHhcChhhcCCC
Confidence 99999999999998743
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-46 Score=379.55 Aligned_cols=253 Identities=24% Similarity=0.342 Sum_probs=211.7
Q ss_pred ccccceeecccccccCCeEEEEEE-----EccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCT-----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
...++|++.+.||+|+||.||+|. +..+++.||||++.... .....+.+.+|+.+++++.+||||+++++++.
T Consensus 19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence 345779999999999999999998 45667899999997543 45556789999999999976999999999998
Q ss_pred cCC-eEEEEEeccCCCchHHHHHhcCC-----------------------------------------------------
Q 008475 171 DSL-CVHIVMELCAGGELFDRIIQRGH----------------------------------------------------- 196 (564)
Q Consensus 171 ~~~-~~~lv~e~~~~~~L~~~l~~~~~----------------------------------------------------- 196 (564)
+.. .+++|||||++|+|.+++.....
T Consensus 97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (359)
T 3vhe_A 97 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV 176 (359)
T ss_dssp STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------
T ss_pred cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchh
Confidence 754 49999999999999999976543
Q ss_pred -------------CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC---cee
Q 008475 197 -------------YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---IFT 260 (564)
Q Consensus 197 -------------~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~---~~~ 260 (564)
+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....... ...
T Consensus 177 ~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 253 (359)
T 3vhe_A 177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKG 253 (359)
T ss_dssp -------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCGGGSCTTSCTTCEEC-
T ss_pred hhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCcEEEEeccceeeecccccchhcc
Confidence 8999999999999999999999999999999999999 677899999999998654332 233
Q ss_pred cccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHH-HHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 261 DVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGI-FDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 261 ~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
...||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+. ...+..+.. .. ....+++++.++|.
T Consensus 254 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~li~ 330 (359)
T 3vhe_A 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-MR--APDYTTPEMYQTML 330 (359)
T ss_dssp -CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCC-CC--CCTTCCHHHHHHHH
T ss_pred ccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCC-CC--CCCCCCHHHHHHHH
Confidence 4667889999999874 58999999999999999998 9999987664443 333433322 22 22458999999999
Q ss_pred HhcccCCCCCCCHHHHhcC
Q 008475 338 KMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~h 356 (564)
+||..||.+|||+.++++|
T Consensus 331 ~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 331 DCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHccCChhhCCCHHHHHHH
Confidence 9999999999999999876
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=364.53 Aligned_cols=255 Identities=26% Similarity=0.401 Sum_probs=207.6
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
|.....||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.+. ||||+++++++......++|||
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLK-HKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhCC-CCCEeeEeeEEEeCCcEEEEEE
Confidence 344558999999999999999999999999987542 334567889999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 181 LCAGGELFDRIIQRG---HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+.. .++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTCCEEECCTTTCEESCC--
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC--CCCCEEEeecccccccCCCC
Confidence 999999999987652 4678999999999999999999999999999999999942 2678999999999875432
Q ss_pred CceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCccCCCCCCCCCCHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQG-IFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.......|++.|+|||++.+ .++.++|||||||++|+|++|..||....... ....... ..........+++++
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 255 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM--FKVHPEIPESMSAEA 255 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHH--HCCCCCCCTTSCHHH
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcc--ccccccccccCCHHH
Confidence 22345678999999999974 27889999999999999999999997643322 1111111 111222335689999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.+||.+||..||++|||+.++|+||||+...
T Consensus 256 ~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 256 KAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999999999999999999998643
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-45 Score=375.95 Aligned_cols=253 Identities=25% Similarity=0.382 Sum_probs=219.4
Q ss_pred ccccceeecccccccCCeEEEEEEEccC-------CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIAT-------GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGA 168 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 168 (564)
...++|.+.+.||+|+||.||+|.+..+ +..||+|++.... .......+.+|+++++++.+||||++++++
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~ 143 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA 143 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence 3456799999999999999999997543 3579999997542 556677899999999999559999999999
Q ss_pred EecCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008475 169 YEDSLCVHIVMELCAGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFL 232 (564)
Q Consensus 169 ~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIl 232 (564)
+......++||||+++|+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 223 (382)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEE
Confidence 999999999999999999999998754 4899999999999999999999999999999999999
Q ss_pred eecCCCCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH
Q 008475 233 LVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQ 307 (564)
Q Consensus 233 l~~~~~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~ 307 (564)
+ +.++.+||+|||++....... ......+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....
T Consensus 224 l---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~ 300 (382)
T 3tt0_A 224 V---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 300 (382)
T ss_dssp E---CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred E---cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9 777899999999998765432 2334566788999999985 58999999999999999999 99999999988
Q ss_pred HHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 308 GIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
++...+..+.... ....+++++.+||.+||..||++|||+.+++++
T Consensus 301 ~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 301 ELFKLLKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp HHHHHHHTTCCCC---CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCCCC---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 8888887764322 224689999999999999999999999999875
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-46 Score=373.22 Aligned_cols=257 Identities=29% Similarity=0.528 Sum_probs=216.9
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH---HhHHHHHHHHHHHHhhc-CCCCccEEEEEE
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR---EDVEDVRREIQIMHHLA-GHKNIVTIKGAY 169 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~-~h~niv~~~~~~ 169 (564)
.+.+.++|++.+.||+|+||.||+|.+..+++.||||++........ ...+.+.+|+.+++++. +||||+++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 34566789999999999999999999999999999999976543221 12245668999999997 379999999999
Q ss_pred ecCCeEEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 170 EDSLCVHIVMELCAG-GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
......++|||++.+ ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+. ..++.+||+|||
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~--~~~~~~kL~Dfg 195 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFG 195 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCCT
T ss_pred ecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEe--CCCCCEEEeeCc
Confidence 999999999999976 89999999888999999999999999999999999999999999999993 156789999999
Q ss_pred CccccCCCCceecccCCCcccchhhhhh-c-CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 249 LSVFFKPGQIFTDVVGSPYYVAPEVLLK-H-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 249 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
++...... ......||+.|+|||++.+ . ++.++|||||||++|+|++|..||.... .+..+...+ ..
T Consensus 196 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~----~~ 264 (320)
T 3a99_A 196 SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFF----RQ 264 (320)
T ss_dssp TCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCC----SS
T ss_pred cccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcccccc----cc
Confidence 99876543 3445679999999999874 3 4678999999999999999999996542 223333322 24
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.+++++.+||.+||..||.+|||+.++++||||....
T Consensus 265 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 265 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 5899999999999999999999999999999998643
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-45 Score=356.72 Aligned_cols=248 Identities=26% Similarity=0.385 Sum_probs=215.6
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|++.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.++++++ ||||+++++++.+....+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 79 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLS-HPKLVKFYGVCSKEYPIY 79 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB----CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEE
T ss_pred chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC----cHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCceE
Confidence 3467999999999999999999875 567899999975432 2356889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE---CTTCCEEECCTTCEEECCT
T ss_pred EEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE---CCCCCEEEccCccceecch
Confidence 9999999999999997754 59999999999999999999999999999999999999 7788999999999987654
Q ss_pred CCce--ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQIF--TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.... ....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||...........+..+...... ..+++.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 233 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP---HLASDT 233 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---TTSCHH
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC---CcChHH
Confidence 4322 23445678999999985 69999999999999999999 99999999888888877776543332 357899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+.+||.+||+.||.+|||+.++++|
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 234 IYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999999986
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-45 Score=365.59 Aligned_cols=258 Identities=24% Similarity=0.438 Sum_probs=212.4
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcC-CCCccEEEEEEecCCeE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG-HKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-h~niv~~~~~~~~~~~~ 175 (564)
..++|++.+.||+|+||.||+|.+. +++.||+|++..... .....+.+.+|+.+++++.. ||||+++++++......
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 3456999999999999999999975 588999999975443 45667889999999999974 69999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
++||| +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+. ++.+||+|||++.....
T Consensus 104 ~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCC---
T ss_pred EEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----CCeEEEeeccccccccC
Confidence 99999 55889999999888999999999999999999999999999999999999993 36899999999987643
Q ss_pred CC---ceecccCCCcccchhhhhh------------cCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCcc
Q 008475 256 GQ---IFTDVVGSPYYVAPEVLLK------------HYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHID 319 (564)
Q Consensus 256 ~~---~~~~~~gt~~y~aPE~~~~------------~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~ 319 (564)
.. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ....+..+......
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 258 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 258 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccc
Confidence 32 2234578999999999864 57889999999999999999999997654 33344444443332
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 320 FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 320 ~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.. .....++++.+||.+||..||.+|||+.++|+||||....
T Consensus 259 ~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 300 (313)
T 3cek_A 259 IE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300 (313)
T ss_dssp CC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred cC--CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence 22 2234689999999999999999999999999999998754
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=370.65 Aligned_cols=249 Identities=18% Similarity=0.212 Sum_probs=208.0
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+.+++.+.+||||+++++++......+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 81 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA 81 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence 44679999999999999999999999999999999875432 2357789999999955999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCc-----EEEeeCCCc
Q 008475 177 IVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS-----LKAIDFGLS 250 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~-----~kl~DfG~~ 250 (564)
+||||+ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++. +||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill---~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI---GRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CCGGGTCTTSEEECCCTTC
T ss_pred EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee---ccCCCCCCceEEEEEcccc
Confidence 999999 9999999976 4679999999999999999999999999999999999999 55555 999999999
Q ss_pred cccCCCCc--------eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCc
Q 008475 251 VFFKPGQI--------FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET---QQGIFDAVLKGHI 318 (564)
Q Consensus 251 ~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~ 318 (564)
........ .....||+.|+|||++.+ .++.++|||||||++|||++|..||.+.. ..+.+..+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~ 237 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR 237 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc
Confidence 87543321 245789999999999985 58999999999999999999999998744 3444555544333
Q ss_pred cCCCCC-CCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 319 DFESDP-WPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 319 ~~~~~~-~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
..+... ...++ ++.+||..||..||.+||++++|++
T Consensus 238 ~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 238 ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 322111 12244 9999999999999999999988876
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-45 Score=358.27 Aligned_cols=246 Identities=23% Similarity=0.367 Sum_probs=214.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.++++++ ||||+++++++.+....++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEEE
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc----CHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCceEEE
Confidence 56999999999999999999986 577899999975432 2356889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CGGGCEEECCTTGGGGBCCHH
T ss_pred EEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEE---cCCCCEEeccccccccccccc
Confidence 9999999999999654 468999999999999999999999999999999999999 677899999999998654332
Q ss_pred --ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 258 --IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 258 --~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
......+|+.|+|||++. ..++.++|||||||++|+|++ |..||......+....+..+.... ....+++.+.
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 237 (269)
T 4hcu_A 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY---KPRLASTHVY 237 (269)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---CCTTSCHHHH
T ss_pred cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCC---CCCcCCHHHH
Confidence 122345677899999998 468999999999999999999 999999999888888887764332 2245789999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~h 356 (564)
++|.+||..||.+|||+.++++|
T Consensus 238 ~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 238 QIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCCcccCcCHHHHHHH
Confidence 99999999999999999999876
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=368.94 Aligned_cols=244 Identities=23% Similarity=0.327 Sum_probs=207.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|.+.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.++++++ ||||+++++++.++...++|
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLE-HPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CcCcccEEEEEecCCeeEEE
Confidence 5699999999999999999999999999999988542 5667788999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---CTTSCEEECCCTTCEECC---
T ss_pred EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE---CCCCCEEEeecccceeccccc
Confidence 999999999999987 5679999999999999999999999999999999999999 778899999999998754322
Q ss_pred ce---------------ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHcC
Q 008475 258 IF---------------TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQG-----IFDAVLKG 316 (564)
Q Consensus 258 ~~---------------~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~-----~~~~i~~~ 316 (564)
.. ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||....... ........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR 242 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc
Confidence 11 14679999999999985 58999999999999999999999986533211 01111111
Q ss_pred CccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 317 HIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 317 ~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
...+.+++.+.+||.+||..||++|||+.++++
T Consensus 243 ------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 243 ------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp ------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 112457889999999999999999999999975
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=378.52 Aligned_cols=249 Identities=25% Similarity=0.335 Sum_probs=215.4
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+.+|+.+++++. ||||+++++++.....+|+
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCC-CTTBCCEEEEECSSSSCEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEecCCCcEE
Confidence 467999999999999999999999899999999986432 4555667889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 178 VMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~---~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGGCEECTTS
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE---cCCCcEEECcCCCceecCCC
Confidence 999999999999997654 59999999999999999999999999999999999999 77789999999999865433
Q ss_pred Ccee---cccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 257 QIFT---DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 257 ~~~~---~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.... ...+++.|+|||++. +.++.++|||||||++|||++ |..||.+....+....+.++.... ....++++
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 343 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP---CPELCPDA 343 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCC---CCTTCCHH
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCCHH
Confidence 2111 122456799999997 468999999999999999998 999999998888887777654321 22458899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhc
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+.+||.+||..||++|||+.++++
T Consensus 344 l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 344 VFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCCchhCcCHHHHHH
Confidence 999999999999999999999874
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-45 Score=365.51 Aligned_cols=251 Identities=21% Similarity=0.321 Sum_probs=217.5
Q ss_pred cccceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..++|.+.+.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++.++ ||||+++++++.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVN-HPHVIKLYGACSQ 97 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCC-CCceeeEEEEEec
Confidence 3467999999999999999999973 455889999997543 4666788999999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCC------------------------CCHHHHHHHHHHHHHHHHHHHHCCCEeecCC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRGH------------------------YSERKAAELTRIIVGVVEACHSLGVMHRDLK 227 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~~------------------------~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlk 227 (564)
....++||||+++++|.+++..... +++..+..++.||+.||.|||++||+|||||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dik 177 (314)
T 2ivs_A 98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA 177 (314)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccc
Confidence 9999999999999999999987543 8999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCC
Q 008475 228 PENFLLVNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFW 302 (564)
Q Consensus 228 p~NIll~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~ 302 (564)
|+|||+ +.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.
T Consensus 178 p~NIli---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 254 (314)
T 2ivs_A 178 ARNILV---AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254 (314)
T ss_dssp GGGEEE---ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred hheEEE---cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999 6678899999999987644332 223456788999999975 58999999999999999999 999999
Q ss_pred CCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 303 AETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 303 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+.....+...+..+... .....+++.+.+||.+||..||.+|||+.+++++
T Consensus 255 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 255 GIPPERLFNLLKTGHRM---ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp TCCGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCHHHHHHHhhcCCcC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 98888888777765432 2234689999999999999999999999999875
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=371.31 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=217.8
Q ss_pred cccceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..++|++.+.||+|+||.||+|++. .+++.||+|++.... .....+.+.+|+.+++.++ ||||+++++++.+
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~ 121 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-NPNIVKLLGVCAV 121 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcc
Confidence 4467999999999999999999987 355899999997543 4556778999999999996 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQR------------------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLK 227 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~------------------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlk 227 (564)
....|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+|||||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk 201 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA 201 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 99999999999999999999763 568999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCC
Q 008475 228 PENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFW 302 (564)
Q Consensus 228 p~NIll~~~~~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~ 302 (564)
|+|||+ +.++.+||+|||++....... ......+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.
T Consensus 202 p~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 202 TRNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp GGGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred cceEEE---CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 999999 677899999999987654322 2234567889999999874 58999999999999999999 999999
Q ss_pred CCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 303 AETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 303 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+....++...+..+.... ....+++.+.+||.+||..||.+|||+.+++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 279 GMAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp TSCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCChHHHHHHHhCCCcCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 999888888888775432 224689999999999999999999999999764
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-45 Score=364.08 Aligned_cols=252 Identities=25% Similarity=0.356 Sum_probs=209.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++++......|+|
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ-EPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcC-CCCeeEEEEEEeeCCeEEEE
Confidence 56999999999999999999999999999999997665545566788999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
|||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV---SADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSCCC---------
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEE---cCCCCEEEecCccCcccccccc
Confidence 9999999999999988889999999999999999999999999999999999999 677899999999987654332
Q ss_pred -ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 258 -IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 258 -~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
......|++.|+|||++.+ .++.++||||||+++|+|++|..||.+.....+...+.. .........+.+++++.+|
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l 268 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQ-AIPRPSTVRPGIPVAFDAV 268 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHS-CCCCGGGTSTTCCTHHHHH
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhcc-CCCCccccCCCCCHHHHHH
Confidence 2335678999999999874 589999999999999999999999988776544444433 3333333446789999999
Q ss_pred HHHhcccCCCCCC-CHHHHhc
Q 008475 336 IRKMLCSQPSERL-TAHEVLC 355 (564)
Q Consensus 336 i~~~l~~dp~~R~-s~~~vl~ 355 (564)
|.+||..||++|| +++++++
T Consensus 269 i~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 269 IARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHhccCCHHHHHHhHHHHHH
Confidence 9999999999999 7887765
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=362.94 Aligned_cols=257 Identities=25% Similarity=0.300 Sum_probs=196.9
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||.||+|.+..+++.||||++..... .....+.+..+..+++.+. ||||+++++++.+...+++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSHD-CPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTTT-CTTBCCEEEEEECSSEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhcC-CCceeeEEEEEecCCcEEE
Confidence 3569999999999999999999999999999999975432 2222333444445666665 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSL-GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||+ ++.+..+... .+.+++..+..++.||+.||.|||++ ||+||||||+|||+ +.++.+||+|||++.....
T Consensus 102 v~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE---CTTSCEEECCCTTC-----
T ss_pred EEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE---CCCCCEEEEECCCchhccC
Confidence 99999 5555554443 46799999999999999999999995 99999999999999 7788999999999987655
Q ss_pred CCceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 256 GQIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWA-ETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
........+|+.|+|||++. ..++.++|||||||++|+|++|..||.. ....+.+..+..+..... +....+
T Consensus 178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 256 (318)
T 2dyl_A 178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL-PGHMGF 256 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC-CSSSCC
T ss_pred CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC-CccCCC
Confidence 55555678999999999984 3588999999999999999999999986 445566666665543322 223458
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
++++.+||.+||..||.+|||+.++++||||+.
T Consensus 257 ~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (318)
T 2dyl_A 257 SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289 (318)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence 999999999999999999999999999999975
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-45 Score=368.44 Aligned_cols=250 Identities=24% Similarity=0.345 Sum_probs=211.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEE--EEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEF--ACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~v--avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
++|++.+.||+|+||.||+|++..++..+ |+|.+.... .....+.+.+|+.+++++.+||||+++++++.+...+|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 45999999999999999999999888865 999886432 34455678899999999955999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCC
Q 008475 177 IVMELCAGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~ 240 (564)
+||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||+ +.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEE---cCCC
Confidence 9999999999999997654 69999999999999999999999999999999999999 6778
Q ss_pred cEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCc
Q 008475 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHI 318 (564)
Q Consensus 241 ~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~ 318 (564)
.+||+|||++.............+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+..+..
T Consensus 180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~ 259 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259 (327)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC
Confidence 999999999875443333344567889999999985 58999999999999999998 9999999988888877766532
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 319 DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 319 ~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
. .....+++.+.+||.+||..||.+|||+.+++++
T Consensus 260 ~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 260 L---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp C---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred C---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2 2234689999999999999999999999999875
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-45 Score=370.61 Aligned_cols=255 Identities=21% Similarity=0.338 Sum_probs=211.1
Q ss_pred ccccceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
...+.|++.+.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++++.+||||+++++++.
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34567999999999999999999973 456789999997543 33445778999999999955999999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCC
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRG-----------------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLK 227 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlk 227 (564)
.....++||||+++|+|.+++.... .+++..+..++.||+.||.|||++||+|||||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik 199 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA 199 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 9999999999999999999997643 27899999999999999999999999999999
Q ss_pred CCcEEeecCCCCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCC
Q 008475 228 PENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFW 302 (564)
Q Consensus 228 p~NIll~~~~~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~ 302 (564)
|+|||+ +.++.+||+|||++....... ......+|+.|+|||++.+ .++.++|||||||++|+|+| |..||.
T Consensus 200 p~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 200 ARNVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp GGGEEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred hhhEEE---cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 999999 677899999999998654332 1233456789999999874 58999999999999999998 999998
Q ss_pred CCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCC
Q 008475 303 AETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHP 357 (564)
Q Consensus 303 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp 357 (564)
+......+..+........ ....+++++.+||.+||..||.+|||+.++++|.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 329 (344)
T 1rjb_A 277 GIPVDANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329 (344)
T ss_dssp TCCCSHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cCCcHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 8775554444444333322 2345799999999999999999999999998874
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-45 Score=364.12 Aligned_cols=254 Identities=22% Similarity=0.327 Sum_probs=213.8
Q ss_pred ccccceeecccccccCCeEEEEEEE-----ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTE-----IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
...++|++.+.||+|+||.||+|.+ ..+++.||+|++.... .....+.+.+|+.+++++.+||||+++++++.
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 3456799999999999999999985 4567899999997543 34556789999999999955999999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRG------------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFL 232 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIl 232 (564)
.....++||||+++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 177 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL 177 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEE
Confidence 9999999999999999999997654 4899999999999999999999999999999999999
Q ss_pred eecCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH
Q 008475 233 LVNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQ 307 (564)
Q Consensus 233 l~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~ 307 (564)
+ +.++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....
T Consensus 178 ~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 254 (313)
T 1t46_A 178 L---THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254 (313)
T ss_dssp E---ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred E---cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence 9 6778999999999987654332 223456788999999874 58999999999999999999 99999877654
Q ss_pred HHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 308 GIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.....+........ ....+++.+.+||.+||..||.+|||+.+++++
T Consensus 255 ~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 255 SKFYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp HHHHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHhccCCCCC--CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 44444333322222 234689999999999999999999999999864
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=355.40 Aligned_cols=251 Identities=25% Similarity=0.376 Sum_probs=202.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC-HHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS-REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
++|++.+.||+|+||.||+|.+. +..||+|++....... ....+.+.+|+.+++.++ ||||+++++++.+....++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCC-CTTBCCEEEEECCC--CEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcC-CCCEeeEEEEEecCCceEE
Confidence 56999999999999999999964 8899999986543222 334577899999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CEeecCCCCcEEeecCC-----CCCcEEEeeCCC
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG---VMHRDLKPENFLLVNKD-----DDFSLKAIDFGL 249 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~Dlkp~NIll~~~~-----~~~~~kl~DfG~ 249 (564)
||||+++++|.+++. .+.+++..+..++.||+.||.|||++| |+||||||+|||+.... .++.+||+|||+
T Consensus 84 v~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp EEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 999999999988774 567999999999999999999999999 99999999999994321 267899999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
+....... .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||.+.........+.......+. ...+
T Consensus 163 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~ 239 (271)
T 3dtc_A 163 AREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI--PSTC 239 (271)
T ss_dssp --------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCC--CTTC
T ss_pred cccccccc-ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCC--Cccc
Confidence 98655433 235678999999999985 4899999999999999999999999998887777776665544332 3568
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
++.+.+||.+||..||.+|||+.++++|
T Consensus 240 ~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 240 PEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 9999999999999999999999999875
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-45 Score=358.48 Aligned_cols=251 Identities=25% Similarity=0.327 Sum_probs=204.1
Q ss_pred ccccceeecccccccCCeEEEEEEEccC---CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIAT---GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
...++|++.+.||+|+||.||+|.+..+ +..||+|++.... .....+.+.+|+.+++++. ||||+++++++. +
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~ 87 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFD-HPHIVKLIGVIT-E 87 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEC-S
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCccceEEEEEc-c
Confidence 3456799999999999999999998654 4569999886532 4556778999999999997 999999999985 4
Q ss_pred CeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 173 LCVHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
...|+||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSR 164 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECC-----
T ss_pred CccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEE---CCCCCEEECcccccc
Confidence 57899999999999999997654 69999999999999999999999999999999999999 566789999999998
Q ss_pred ccCCCCc--eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 252 FFKPGQI--FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 252 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
....... .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+..+... ...+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~---~~~~~ 241 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPN 241 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTT
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC---CCCCC
Confidence 7654332 223456788999999974 58999999999999999997 99999998888888888766432 22356
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+++.+.+||.+||..||.+|||+.+++++
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 270 (281)
T 1mp8_A 242 CPPTLYSLMTKCWAYDPSRRPRFTELKAQ 270 (281)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 89999999999999999999999998754
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=357.89 Aligned_cols=247 Identities=23% Similarity=0.360 Sum_probs=212.0
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.+++.+. ||||+++++++.+....++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC----CHHHHHHHHHHHhcCC-CCCEeeEEEEEecCCCeEE
Confidence 356999999999999999999875 677899999975432 2356889999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 178 VMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp EECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTSCEEECSTTGGGGBCCH
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE---cCCCCEEEcccccccccccc
Confidence 9999999999999976 5679999999999999999999999999999999999999 77889999999999865432
Q ss_pred C--ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 257 Q--IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 257 ~--~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
. ......+|+.|+|||++. ..++.++||||||+++|+|++ |..||...........+..+..... ...+++.+
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l 250 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---PHLASEKV 250 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CTTCCHHH
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC---CCcCCHHH
Confidence 2 122345677899999998 458999999999999999998 9999999998888888877643332 24578999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+||.+||..||.+|||+.++++|
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 251 YTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCChhHCcCHHHHHHH
Confidence 999999999999999999999876
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=362.49 Aligned_cols=255 Identities=19% Similarity=0.294 Sum_probs=211.4
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.+.+|+||+++++++.....
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~ 80 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 80 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCce
Confidence 345677999999999999999999999999999999986443 223577899999999779999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC--CCCCcEEEeeCCCcc
Q 008475 175 VHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK--DDDFSLKAIDFGLSV 251 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~--~~~~~~kl~DfG~~~ 251 (564)
.++||||+ +++|.+++...+ ++++..+..++.||+.||.|||++||+||||||+|||+..+ +....+||+|||++.
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred eEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99999999 999999998754 59999999999999999999999999999999999999432 122349999999998
Q ss_pred ccCCCC--------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHcCCcc
Q 008475 252 FFKPGQ--------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE---TQQGIFDAVLKGHID 319 (564)
Q Consensus 252 ~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~---~~~~~~~~i~~~~~~ 319 (564)
...... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+. .....+..+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 239 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC
Confidence 765432 2345679999999999985 5899999999999999999999999874 344444444433222
Q ss_pred CC-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 320 FE-SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 320 ~~-~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+ ......+++++.+||.+||..||.+||++++|++
T Consensus 240 ~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 240 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 21 1122468999999999999999999999999865
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=375.03 Aligned_cols=260 Identities=22% Similarity=0.397 Sum_probs=208.5
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc----------CCCCccEEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA----------GHKNIVTIKG 167 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~----------~h~niv~~~~ 167 (564)
.++|++.+.||+|+||.||+|++..+++.||||++.. .....+.+.+|+.+++++. +||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG----DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC----CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 4579999999999999999999999999999999964 3345567889999999886 2789999999
Q ss_pred EEecCC----eEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEeecC---C
Q 008475 168 AYEDSL----CVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSL-GVMHRDLKPENFLLVNK---D 237 (564)
Q Consensus 168 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~Dlkp~NIll~~~---~ 237 (564)
++.... .+++|||++ +++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+|||+... +
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCc
Confidence 998654 799999999 89999999763 4599999999999999999999998 99999999999999532 2
Q ss_pred CCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH------HHHH
Q 008475 238 DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ------QGIF 310 (564)
Q Consensus 238 ~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~------~~~~ 310 (564)
..+.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ...+
T Consensus 173 ~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp TEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred CcceEEEcccccccccCC--CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 345799999999987543 2345689999999999985 589999999999999999999999976542 2222
Q ss_pred HHHHcCCccCC--------------------------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q 008475 311 DAVLKGHIDFE--------------------------------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHE 352 (564)
Q Consensus 311 ~~i~~~~~~~~--------------------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~ 352 (564)
..+.......+ ......+++++.+||.+||+.||.+|||+.+
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 22221000000 0011224578899999999999999999999
Q ss_pred HhcCCCcCCCCC
Q 008475 353 VLCHPWICENGV 364 (564)
Q Consensus 353 vl~hp~~~~~~~ 364 (564)
||+||||++...
T Consensus 331 ll~hp~f~~~~~ 342 (373)
T 1q8y_A 331 LVNHPWLKDTLG 342 (373)
T ss_dssp HHTCGGGTTCTT
T ss_pred HhhChhhhcccC
Confidence 999999997543
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=363.87 Aligned_cols=252 Identities=24% Similarity=0.390 Sum_probs=216.6
Q ss_pred cccceeecccccccCCeEEEEEEEc-------cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEI-------ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
..++|++.+.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++.+.+||||+++++++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 3467999999999999999999975 467789999997543 4556778999999999995599999999999
Q ss_pred ecCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEe
Q 008475 170 EDSLCVHIVMELCAGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLL 233 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll 233 (564)
.....+++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE
Confidence 99999999999999999999997654 38999999999999999999999999999999999999
Q ss_pred ecCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 008475 234 VNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQG 308 (564)
Q Consensus 234 ~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~ 308 (564)
+.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+
T Consensus 191 ---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 267 (334)
T 2pvf_A 191 ---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267 (334)
T ss_dssp ---CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred ---cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH
Confidence 7788999999999987654332 233456788999999875 58999999999999999999 999999998888
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+...+..+.... ....+++++.+||.+||..||.+|||+.+++++
T Consensus 268 ~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 268 LFKLLKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp HHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCCCC---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 888777664322 234689999999999999999999999999865
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=356.23 Aligned_cols=252 Identities=22% Similarity=0.322 Sum_probs=207.6
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHh----HHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED----VEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~----~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
..++|++.+.||+|+||.||+|.+..+++.||+|++.......... .+.+.+|+.++++++ ||||+++++++.+.
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNIVKLYGLMHNP 95 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCC-CTTBCCEEEEETTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCC-CCCchhhheeecCC
Confidence 3466999999999999999999999999999999986544322222 267889999999997 99999999999776
Q ss_pred CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCC--CCCcEEEeeC
Q 008475 173 LCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKD--DDFSLKAIDF 247 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~--~~~~~kl~Df 247 (564)
. ++||||+++++|.+.+... ..+++..+..++.||+.||.|||++| |+||||||+|||+...+ ....+||+||
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 6 6999999999999888654 46999999999999999999999999 99999999999994221 1223999999
Q ss_pred CCccccCCCCceecccCCCcccchhhhh---hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHcCCccCCC
Q 008475 248 GLSVFFKPGQIFTDVVGSPYYVAPEVLL---KHYGPEADVWTAGVILYILLSGVPPFWAETQQG--IFDAVLKGHIDFES 322 (564)
Q Consensus 248 G~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~--~~~~i~~~~~~~~~ 322 (564)
|++..... ......||+.|+|||++. ..++.++|||||||++|+|++|+.||....... ....+.......
T Consensus 174 g~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-- 249 (287)
T 4f0f_A 174 GLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP-- 249 (287)
T ss_dssp TTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCC--
T ss_pred Cccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCC--
Confidence 99985433 345678999999999984 347899999999999999999999997655433 244444433322
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 323 ~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.....+++++.+||.+||..||.+|||+.++++
T Consensus 250 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 250 TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 233568999999999999999999999999986
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=366.82 Aligned_cols=260 Identities=24% Similarity=0.299 Sum_probs=217.7
Q ss_pred ccccceeecccccccCCeEEEEEE-----EccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCT-----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
...++|++.+.||+|+||.||+|+ +..++..||||++.... .......+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~ 103 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFN-HQNIVRCIGVSL 103 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEC
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCC-CCCCCeEEEEEc
Confidence 345679999999999999999999 56678899999996432 4556678899999999996 999999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEE
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRG-------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLK 243 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~k 243 (564)
.....|+||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+..++....+|
T Consensus 104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEE
Confidence 9999999999999999999998753 489999999999999999999999999999999999995444566799
Q ss_pred EeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCc
Q 008475 244 AIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHI 318 (564)
Q Consensus 244 l~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~ 318 (564)
|+|||++....... ......+++.|+|||++.+ .++.++|||||||++|+|++ |..||......+....+..+..
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~ 263 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 263 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCC
Confidence 99999987543222 2234567889999999874 58999999999999999998 9999999888888888877643
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 319 DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 319 ~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.. ....+++.+.+||.+||..||.+|||+.++++|.|+..
T Consensus 264 ~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 264 MD---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp CC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 32 23468999999999999999999999999999988653
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-45 Score=368.21 Aligned_cols=258 Identities=24% Similarity=0.303 Sum_probs=191.5
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHH-HHHhhcCCCCccEEEEEEecCCeEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQ-IMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
.++|++.+.||+|+||.||+|.+..+++.||||++.... .......+..|+. +++.+ +||||+++++++......+
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~-~h~niv~~~~~~~~~~~~~ 97 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSS-DCPYIVQFYGALFREGDCW 97 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSC-CCTTBCCEEEEEECSSEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHHHHHHHHcC-CCCcEeeeeeEEEeCCceE
Confidence 356999999999999999999999999999999997543 3444556666776 55555 4999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 177 IVMELCAGGELFDRIIQ-----RGHYSERKAAELTRIIVGVVEACHSL-GVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
+||||+++ +|.+++.. ...+++..+..++.|++.||.|||+. ||+||||||+|||+ +.++.+||+|||++
T Consensus 98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~ 173 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL---DRSGNIKLCDFGIS 173 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEE---ETTTEEEECCCSSS
T ss_pred EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEE---cCCCCEEEccCCCc
Confidence 99999964 88777753 56799999999999999999999999 99999999999999 67789999999999
Q ss_pred cccCCCCceecccCCCcccchhhhh-----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCc-cCCCC
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLL-----KHYGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHI-DFESD 323 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~-~~~~~ 323 (564)
.............||+.|+|||++. ..++.++|||||||++|+|++|..||..... .+.+..+..+.. .+...
T Consensus 174 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3aln_A 174 GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS 253 (327)
T ss_dssp CC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCC
T ss_pred eecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCc
Confidence 8765554445567999999999983 3589999999999999999999999976442 122222222221 12222
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 324 ~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
....+++.+.+||.+||..||.+|||+.++++||||...
T Consensus 254 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 334689999999999999999999999999999999753
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=371.85 Aligned_cols=249 Identities=22% Similarity=0.343 Sum_probs=204.2
Q ss_pred ccceeecccccccCCeEEEEEEEc---cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
.+.|.+.+.||+|+||.||+|++. .++..||||++.... .....+.+.+|+.++++++ ||||+++++++.+...
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 120 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKP 120 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCc
Confidence 356999999999999999999976 467789999996542 4556678999999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
+++||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 121 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred eEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---cCCCCEEECcCcccccc
Confidence 999999999999999997654 69999999999999999999999999999999999999 77889999999999876
Q ss_pred CCCCc----eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 254 KPGQI----FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 254 ~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
..... .....+++.|+|||++.+ .++.++|||||||++|||++ |+.||......++...+..+... +....
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~ 274 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPMD 274 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEEC---CCCTT
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCcc
Confidence 43321 112345678999999984 58999999999999999998 99999999988888887765322 22346
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++..+.+||.+||..||.+||++.++++
T Consensus 275 ~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 275 CPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp CBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 8899999999999999999999999875
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=365.67 Aligned_cols=249 Identities=21% Similarity=0.285 Sum_probs=205.0
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEE----EEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF----ACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~v----avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
.++|++.+.||+|+||.||+|.+..+++.+ |+|.+.... .....+.+.+|+.++++++ ||||+++++++.+..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVD-NPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCC-BTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCC
Confidence 356999999999999999999998887754 777664322 3345678899999999997 999999999998765
Q ss_pred eEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 174 CVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
.++|+||+.+|+|.+++.. .+.+++..+..|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll---~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCTTHHHH
T ss_pred -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEE---CCCCCEEEccCcceeE
Confidence 7889999999999999977 4579999999999999999999999999999999999999 6677899999999987
Q ss_pred cCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 253 FKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 253 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
...... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.....+...+..+.... ....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~ 243 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---QPPI 243 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCTT
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCC---CCcc
Confidence 644322 223456789999999985 58999999999999999999 999999888888777776654322 2345
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
++..+.+||.+||+.||.+|||+.+++++
T Consensus 244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 244 CTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp BCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 88999999999999999999999999875
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=365.70 Aligned_cols=255 Identities=29% Similarity=0.541 Sum_probs=206.0
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH---HhHHHHHHHHHHHHhhc---CCCCccEEEEE
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR---EDVEDVRREIQIMHHLA---GHKNIVTIKGA 168 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~---~h~niv~~~~~ 168 (564)
+.+.++|++.+.||+|+||.||+|.+..+++.||+|++........ .....+.+|+.+++++. +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 3456779999999999999999999999999999999976543221 12334567999999983 39999999999
Q ss_pred EecCCeEEEEEec-cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 169 YEDSLCVHIVMEL-CAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 169 ~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
+......++|||+ +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++. ..++.+||+||
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~~kl~df 184 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID--LRRGCAKLIDF 184 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEE--TTTTEEEECCC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEe--CCCCeEEEEEc
Confidence 9999999999999 78999999999888899999999999999999999999999999999999993 15678999999
Q ss_pred CCccccCCCCceecccCCCcccchhhhhhc-C-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCC
Q 008475 248 GLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-Y-GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW 325 (564)
Q Consensus 248 G~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 325 (564)
|++...... ......|++.|+|||++.+. + +.++|||||||++|+|++|+.||.... .+......+ .
T Consensus 185 g~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~----~ 253 (312)
T 2iwi_A 185 GSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHF----P 253 (312)
T ss_dssp SSCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCCCC----C
T ss_pred chhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhccCC----c
Confidence 999876543 34567799999999998753 4 458999999999999999999996532 222333332 2
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
..+++.+.+||.+||..||++|||+.++++||||+..
T Consensus 254 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~ 290 (312)
T 2iwi_A 254 AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP 290 (312)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCc
Confidence 4589999999999999999999999999999999864
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=359.40 Aligned_cols=250 Identities=23% Similarity=0.340 Sum_probs=203.8
Q ss_pred ccccceeecccccccCCeEEEEEE----EccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
...++|++.+.||+|+||.||+|+ +..+++.||||++... .....+.+.+|+.++++++ ||||+++++++..
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 82 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYS 82 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECH
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEec
Confidence 345679999999999999999998 5678999999998643 4566778999999999997 9999999999864
Q ss_pred --CCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 172 --SLCVHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 172 --~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
...+++||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 83 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg 159 (295)
T 3ugc_A 83 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 159 (295)
T ss_dssp HHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCC
T ss_pred CCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEE---cCCCeEEEccCc
Confidence 456899999999999999997754 49999999999999999999999999999999999999 667789999999
Q ss_pred CccccCCCC----ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH----------------
Q 008475 249 LSVFFKPGQ----IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ---------------- 307 (564)
Q Consensus 249 ~~~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~---------------- 307 (564)
++....... ......+++.|+|||++.+ .++.++|||||||++|+|++|..||......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 998764432 1223456778999999985 5899999999999999999999998643221
Q ss_pred HHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 308 GIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.....+..+.. .+....+++++.+||.+||..||++|||+.++++
T Consensus 240 ~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 240 HLIELLKNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHHHHTTCC---CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHhccCc---CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 12222322221 1223568999999999999999999999999875
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=377.82 Aligned_cols=257 Identities=23% Similarity=0.390 Sum_probs=212.2
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC--
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-- 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-- 173 (564)
...++|++.+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|++++++++ ||||+++++++....
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 82 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTR 82 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTC
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCCCCeEEEeeccCCCC
Confidence 356779999999999999999999999999999999975432 233567789999999997 999999999998654
Q ss_pred eEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEee-cCCCCCcEEEeeCCC
Q 008475 174 CVHIVMELCAGGELFDRIIQRG---HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV-NKDDDFSLKAIDFGL 249 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~-~~~~~~~~kl~DfG~ 249 (564)
..++|||||++|+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+. ..+..+.+||+|||+
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp CEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred eeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 7899999999999999987543 399999999999999999999999999999999999983 334566799999999
Q ss_pred ccccCCCCceecccCCCcccchhhhh---------hcCCCcchHHHHHHHHHHHHhCCCCCCC----CCHHHHHHHHHcC
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLL---------KHYGPEADVWTAGVILYILLSGVPPFWA----ETQQGIFDAVLKG 316 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DvwSlG~il~elltg~~pf~~----~~~~~~~~~i~~~ 316 (564)
+.............||+.|+|||++. +.++.++|||||||++|+|++|+.||.. ....+.+..+..+
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred ceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 98876666666778999999999986 3578899999999999999999999964 2334555555554
Q ss_pred CccCC---------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 317 HIDFE---------------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 317 ~~~~~---------------------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
..... ......+++.+.+||.+||.+||++||+++++++
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence 32110 0001124567889999999999999999999855
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=357.62 Aligned_cols=253 Identities=25% Similarity=0.446 Sum_probs=204.7
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.++ ||||+++++++......++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCcEEE
Confidence 346999999999999999999999999999999998655556677788999999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 178 VMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~---~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE---cCCCCEEEEeccceeee
Confidence 9999999999998864 4568999999999999999999999999999999999999 77889999999998765
Q ss_pred CCCC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCCccCCCCCCCCCC
Q 008475 254 KPGQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET--QQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 254 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
.... ......|++.|+|||++.+ .++.++|||||||++|+|++|..||.+.. .......+..+... ......++
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 264 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP--PLPSDHYS 264 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC--CCCTTTSC
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC--CCcccccC
Confidence 4332 2334678999999999875 58999999999999999999999997643 34455555554332 22335689
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+++.+||.+||..||.+|||+.+++++
T Consensus 265 ~~l~~li~~~l~~dp~~Rps~~~il~~ 291 (310)
T 2wqm_A 265 EELRQLVNMCINPDPEKRPDVTYVYDV 291 (310)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999999999999999999999763
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=359.16 Aligned_cols=248 Identities=19% Similarity=0.246 Sum_probs=205.1
Q ss_pred cccceeecccccccCCeEEEEEEEccCC-------cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATG-------IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
..++|++.+.||+|+||.||+|.+..++ ..||+|++... .....+.+.+|+.++++++ ||||+++++++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~ 81 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLS-HKHLVLNYGVC 81 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSC-CTTBCCEEEEE
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCC-CCCEeEEEEEE
Confidence 3467999999999999999999998877 46999998654 2345678899999999997 99999999999
Q ss_pred ecCCeEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC-----CCcEE
Q 008475 170 EDSLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD-----DFSLK 243 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~-----~~~~k 243 (564)
.+....++||||+++++|.+++...+. +++..+..++.||+.||.|||++||+||||||+|||+..+.. .+.+|
T Consensus 82 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 82 VCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp CCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred EeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceee
Confidence 999999999999999999999987654 999999999999999999999999999999999999943221 11299
Q ss_pred EeeCCCccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHcCCccC
Q 008475 244 AIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGV-PPFWAETQQGIFDAVLKGHIDF 320 (564)
Q Consensus 244 l~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~-~pf~~~~~~~~~~~i~~~~~~~ 320 (564)
|+|||++...... ....+|+.|+|||++.+ .++.++|||||||++|+|++|. +||............ ......
T Consensus 162 l~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~-~~~~~~ 237 (289)
T 4fvq_A 162 LSDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY-EDRHQL 237 (289)
T ss_dssp ECCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-HTTCCC
T ss_pred eccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh-hccCCC
Confidence 9999998765432 23457889999999974 4899999999999999999955 555555544443333 332222
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 321 ~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+ ..+++++.+||.+||+.||.+|||+.++++|
T Consensus 238 ~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 238 P----APKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp C----CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred C----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 2 3457889999999999999999999999986
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-45 Score=367.66 Aligned_cols=249 Identities=21% Similarity=0.307 Sum_probs=208.9
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcE----EEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIE----FACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
.++|++.+.||+|+||.||+|.+..++.. ||+|.+.... .....+.+.+|+.+++.++ ||||+++++++. +.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~ 87 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLD-HAHIVRLLGLCP-GS 87 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCC-CTTBCCEEEEEC-BS
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEc-CC
Confidence 35699999999999999999999888876 6777664332 2223345678999999997 999999999886 45
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 174 CVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
..++||||+.+|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADL 164 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE---SSSSCEEECSCSGGGG
T ss_pred ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE---CCCCeEEECCCCcccc
Confidence 689999999999999998764 579999999999999999999999999999999999999 7788999999999987
Q ss_pred cCCCC---ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 253 FKPGQ---IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 253 ~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
..... ......+++.|+|||++. +.++.++|||||||++|+|++ |..||.+....++...+..+..... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~ 241 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ---PQI 241 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCC---CTT
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC---CCc
Confidence 64432 234566788999999998 469999999999999999999 9999999888888887776643322 234
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
++.++.+||.+||..||.+|||+.++++|
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 242 CTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp BCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred CcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 78889999999999999999999999886
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=361.18 Aligned_cols=253 Identities=21% Similarity=0.311 Sum_probs=218.3
Q ss_pred cccccceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
....++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.+. ||||+++++++
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~ 97 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVV 97 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCC-CTTBCCEEEEE
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcC-CCCEeeeEEEE
Confidence 344567999999999999999999876 467889999996443 4455667899999999997 99999999999
Q ss_pred ecCCeEEEEEeccCCCchHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCC
Q 008475 170 EDSLCVHIVMELCAGGELFDRIIQR----------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD 239 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~ 239 (564)
.+....++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli---~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---CTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE---cCC
Confidence 9999999999999999999998653 357999999999999999999999999999999999999 777
Q ss_pred CcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 008475 240 FSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVL 314 (564)
Q Consensus 240 ~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~ 314 (564)
+.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+.
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 254 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 254 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH
Confidence 8999999999986543321 123456889999999975 58999999999999999999 899999998888888887
Q ss_pred cCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 315 KGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 315 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+.... ....+++.+.+||.+||..||.+|||+.++++|
T Consensus 255 ~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 255 EGGLLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp TTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCcCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 765432 234689999999999999999999999999986
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=354.52 Aligned_cols=248 Identities=23% Similarity=0.339 Sum_probs=216.4
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|++.+.||+|+||.||+|.+..++..||+|++... ....+.+.+|+.++++++ ||||+++++++.+...++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCCEE
Confidence 456699999999999999999999999999999999643 234577889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEE---CGGGCEEECCCCGGGTSC
T ss_pred EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEE---cCCCCEEEccCccceecc
Confidence 999999999999999764 458999999999999999999999999999999999999 677899999999998765
Q ss_pred CCC--ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQ--IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
... ......+|+.|+|||++.+ .++.++||||||+++|+|++ |..||...........+...... .....+++
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 239 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---ERPEGCPE 239 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---CCCTTCCH
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCC---CCCCCCCH
Confidence 433 2233456788999999984 58999999999999999999 99999988888877777665322 22356899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+.+||.+||..||.+|||+.++++
T Consensus 240 ~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 240 KVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHhCCChhhCcCHHHHHH
Confidence 9999999999999999999999964
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=361.33 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=211.2
Q ss_pred cccceeecccccccCCeEEEEEEE-----ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTE-----IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..++|++.+.||+|+||.||+|.+ ..+++.||+|++.... .....+.+.+|+.+++++.+||||+++++++..
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 102 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTK 102 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec
Confidence 456799999999999999999985 3567899999997543 455567889999999999669999999999876
Q ss_pred CC-eEEEEEeccCCCchHHHHHhcCC----------------CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEee
Q 008475 172 SL-CVHIVMELCAGGELFDRIIQRGH----------------YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV 234 (564)
Q Consensus 172 ~~-~~~lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~ 234 (564)
.. .+++||||+++++|.+++..... +++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~- 181 (316)
T 2xir_A 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL- 181 (316)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE-
Confidence 54 59999999999999999987544 8899999999999999999999999999999999999
Q ss_pred cCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH-H
Q 008475 235 NKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQ-G 308 (564)
Q Consensus 235 ~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~-~ 308 (564)
+.++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.... .
T Consensus 182 --~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~ 259 (316)
T 2xir_A 182 --SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259 (316)
T ss_dssp --CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred --CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH
Confidence 6778999999999986543321 233567889999999975 58999999999999999998 99999876643 3
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
....+..+... .....+++.+.++|.+||..||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 260 FCRRLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp HHHHHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhccCccC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 44444444321 1224578999999999999999999999999886
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-44 Score=353.52 Aligned_cols=249 Identities=23% Similarity=0.273 Sum_probs=210.8
Q ss_pred ccceeecc-cccccCCeEEEEEEE--ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 98 RDLYTLGR-KLGQGQFGTTYLCTE--IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 98 ~~~y~~~~-~lG~G~fg~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..+|++.+ .||+|+||.||+|.+ ..+++.||||++..... .....+.+.+|+.+++.+. ||||+++++++ ....
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLD-NPYIVRMIGIC-EAES 91 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCC-CTTBCCEEEEE-ESSS
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCC-CCCEEEEEEEE-CCCC
Confidence 35688888 999999999999954 56678999999975432 3344678999999999997 99999999999 5667
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
.++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCEECC
T ss_pred cEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEE---eCCCcEEEccCCcceeec
Confidence 89999999999999999988889999999999999999999999999999999999999 566799999999998765
Q ss_pred CCCce----ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 255 PGQIF----TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 255 ~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
..... ....+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+....++...+..+.... ....+
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 245 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG---CPAGC 245 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTC
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---CCCCC
Confidence 43321 22346688999999975 58899999999999999999 999999998888888877654321 23468
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++.+.++|.+||..||.+|||+.++++
T Consensus 246 ~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 246 PREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999999999874
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=375.91 Aligned_cols=257 Identities=26% Similarity=0.401 Sum_probs=201.1
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
..+.+.|.+.++||+|+||+||.+. ..+|+.||||++... ..+.+.+|+.+++.+.+||||+++++++.+...
T Consensus 11 ~~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~ 83 (434)
T 2rio_A 11 QSLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRF 83 (434)
T ss_dssp CSCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred hhhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCe
Confidence 3456678889999999999998754 568999999998643 235678899999987569999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCC-------HHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC----------C
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYS-------ERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK----------D 237 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~-------~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~----------~ 237 (564)
+|||||||. |+|.+++....... +..+..++.||+.||.|||++||+||||||+|||+... +
T Consensus 84 ~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 84 LYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCC
Confidence 999999995 69999997654332 23457899999999999999999999999999999542 2
Q ss_pred CCCcEEEeeCCCccccCCCC-----ceecccCCCcccchhhhhh--------cCCCcchHHHHHHHHHHHHh-CCCCCCC
Q 008475 238 DDFSLKAIDFGLSVFFKPGQ-----IFTDVVGSPYYVAPEVLLK--------HYGPEADVWTAGVILYILLS-GVPPFWA 303 (564)
Q Consensus 238 ~~~~~kl~DfG~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--------~~~~~~DvwSlG~il~ellt-g~~pf~~ 303 (564)
..+.+||+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|||++ |..||..
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 45689999999998765432 1234679999999999963 48899999999999999999 9999976
Q ss_pred CCHHHHHHHHHcCCccCCCCC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 304 ETQQGIFDAVLKGHIDFESDP---WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 304 ~~~~~~~~~i~~~~~~~~~~~---~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
..... ..+..+....+... ...+++++.+||.+||+.||.+|||+.++++||||..
T Consensus 243 ~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 243 KYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp TTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred chhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 55433 34445444333221 1124578999999999999999999999999999964
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=353.54 Aligned_cols=247 Identities=35% Similarity=0.625 Sum_probs=198.5
Q ss_pred cccccceeec-ccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--
Q 008475 95 DNIRDLYTLG-RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-- 171 (564)
Q Consensus 95 ~~~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-- 171 (564)
..+.+.|.+. +.||+|+||.||+|.+..+++.||+|++... ..+.+|+.++.++.+||||+++++++..
T Consensus 13 ~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~ 84 (299)
T 3m2w_A 13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLY 84 (299)
T ss_dssp SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred cccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhc
Confidence 3445567776 7899999999999999999999999998632 3567899998666669999999999987
Q ss_pred --CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 172 --SLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 172 --~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
...+++||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 85 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp TTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred CCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 778999999999999999998754 6999999999999999999999999999999999999954434789999999
Q ss_pred CCccccCCCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----cCCccCCCC
Q 008475 248 GLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL----KGHIDFESD 323 (564)
Q Consensus 248 G~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~----~~~~~~~~~ 323 (564)
|++..... ..++.++|||||||++|+|++|..||...........+. .+...++..
T Consensus 165 g~a~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
T 3m2w_A 165 GFAKETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 224 (299)
T ss_dssp TTCEECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHH
T ss_pred cccccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCch
Confidence 99875432 346789999999999999999999997765543322111 111122211
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCC
Q 008475 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRS 369 (564)
Q Consensus 324 ~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~ 369 (564)
.+..+++++.+||.+||..||.+|||+.++|+||||......+...
T Consensus 225 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~~ 270 (299)
T 3m2w_A 225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 270 (299)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCCB
T ss_pred hcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCCC
Confidence 2246899999999999999999999999999999998765544433
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-44 Score=349.18 Aligned_cols=245 Identities=18% Similarity=0.256 Sum_probs=211.5
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC--CeE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--LCV 175 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~~ 175 (564)
.++|++.+.||+|+||.||+|.+. +..||+|++..... .....+.+.+|+.++++++ ||||+++++++.+. ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 84 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDW-STRKSRDFNEECPRLRIFS-HPNVLPVLGACQSPPAPHP 84 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCCS-CTTEECEEEEECTTTSSSC
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEeccccc-CHHHHHHHHHHHHHHHhcC-CCchhheEEEEccCCCCCe
Confidence 356999999999999999999974 88999999976533 4556678999999999997 99999999999887 789
Q ss_pred EEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 176 HIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
++||||+++|+|.+++...+ .+++..+..++.||+.||.|||++| |+||||||+|||+ +.++.++|+|||++.
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~---~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI---DEDMTARISMADVKF 161 (271)
T ss_dssp EEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE---CTTSCEEEEGGGSCC
T ss_pred EeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE---cCCcceeEEecccee
Confidence 99999999999999998765 4899999999999999999999999 9999999999999 778889999998876
Q ss_pred ccCCCCceecccCCCcccchhhhhhc-CC---CcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLLKH-YG---PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~---~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
.... ....||+.|+|||++.+. ++ .++|||||||++|+|++|..||...........+........ ....
T Consensus 162 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~ 235 (271)
T 3kmu_A 162 SFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT--IPPG 235 (271)
T ss_dssp TTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCC--CCTT
T ss_pred eecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCC--CCCC
Confidence 5332 345789999999999743 33 379999999999999999999999888877776665544332 2356
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+++++.+||.+||..||.+|||+.++++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 236 ISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 8999999999999999999999999975
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=362.45 Aligned_cols=253 Identities=23% Similarity=0.384 Sum_probs=212.1
Q ss_pred cccceeecccccccCCeEEEEEEEccCCc-----EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGI-----EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..+.|++.+.||+|+||.||+|.+..++. .||+|.+.... .....+.+.+|+.+++.+.+||||+++++++..
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 34669999999999999999999877664 79999996543 455667899999999999559999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQR--------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD 237 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~ 237 (564)
...+++||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL---T 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE---E
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE---C
Confidence 99999999999999999998653 357999999999999999999999999999999999999 6
Q ss_pred CCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 008475 238 DDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDA 312 (564)
Q Consensus 238 ~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~ 312 (564)
.++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 278 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHH
Confidence 677999999999986543221 223456788999999874 58999999999999999999 9999988765554444
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 313 VLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 313 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+........ ....+++.+.+||.+||..||.+|||+.+++++
T Consensus 279 ~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 320 (333)
T 2i1m_A 279 LVKDGYQMA--QPAFAPKNIYSIMQACWALEPTHRPTFQQICSF 320 (333)
T ss_dssp HHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 444333322 224578999999999999999999999999763
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-44 Score=348.78 Aligned_cols=246 Identities=23% Similarity=0.359 Sum_probs=213.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.+++.++ ||||+++++++.+....++|
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSCEEE
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCCeEEE
Confidence 56999999999999999999986 677899999975432 2357889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp ECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CGGGCEEECCTTGGGGBCCHH
T ss_pred EeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE---CCCCCEEEccccccccccccc
Confidence 9999999999999765 568999999999999999999999999999999999999 677899999999998654321
Q ss_pred --ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 258 --IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 258 --~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
......+++.|+|||++.+ .++.++||||||+++|+|++ |..||......+....+..+.... ....+++.+.
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~ 235 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY---KPRLASTHVY 235 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---CCTTSCHHHH
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCC---CCccCcHHHH
Confidence 1223456778999999984 58999999999999999999 899999998888888887764332 2245789999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+||.+||..||.+|||+.+++++
T Consensus 236 ~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 236 QIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999999999864
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=349.67 Aligned_cols=250 Identities=25% Similarity=0.334 Sum_probs=209.7
Q ss_pred cccceeecccccccCCeEEEEEEEcc---CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
..++|++.+.||+|+||.||+|.+.. ++..||+|++.... .....+.+.+|+.+++.++ ||||+++++++.++
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~- 85 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEEE- 85 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHC-CTTBCCEEEEECSS-
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCC-CCCcceEEEEEcCC-
Confidence 44679999999999999999998654 33469999987543 4556778999999999997 99999999998754
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 174 CVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 86 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 86 PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV---ASPECVKLGDFGLSRY 162 (281)
T ss_dssp SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---EETTEEEECCCCGGGC
T ss_pred CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE---CCCCcEEeCccCCCcc
Confidence 568999999999999999765 459999999999999999999999999999999999999 5667899999999987
Q ss_pred cCCCC--ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 253 FKPGQ--IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 253 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
..... ......+++.|+|||++.+ .++.++|||||||++|+|++ |+.||......+....+..+.... ....+
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 239 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP---KPDLC 239 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC---CCTTC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC---CCCCC
Confidence 65432 1233456788999999974 58999999999999999998 999999888777777776654322 22458
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
++.+.+||.+||..||.+|||+.+++++
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 240 PPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 9999999999999999999999999865
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=351.53 Aligned_cols=250 Identities=24% Similarity=0.324 Sum_probs=212.6
Q ss_pred ccceeecc-cccccCCeEEEEEEEc--cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 98 RDLYTLGR-KLGQGQFGTTYLCTEI--ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 98 ~~~y~~~~-~lG~G~fg~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
.++|.+.. .||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++.++ ||||+++++++. ...
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~ 83 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLD-NPYIVRLIGVCQ-AEA 83 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEE-SSS
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCC-CCCEeEEEEEec-CCC
Confidence 34566766 9999999999999854 467889999997542 4566788999999999996 999999999994 566
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---EETTEEEECCCTTCEEC
T ss_pred cEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEE---cCCCCEEECcccceeee
Confidence 99999999999999988654 569999999999999999999999999999999999999 56779999999999876
Q ss_pred CCCCce----ecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 254 KPGQIF----TDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 254 ~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
...... ....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||......+....+..+.... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~ 237 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME---CPPE 237 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCC---CCTT
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCC---CCCC
Confidence 543321 23456789999999984 58999999999999999998 999999888888888877764321 2346
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHP 357 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp 357 (564)
+++++.+||.+||..||.+||++.++++|.
T Consensus 238 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 267 (287)
T 1u59_A 238 CPPELYALMSDCWIYKWEDRPDFLTVEQRM 267 (287)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 899999999999999999999999999874
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=373.51 Aligned_cols=242 Identities=24% Similarity=0.317 Sum_probs=208.6
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-eEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-CVH 176 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-~~~ 176 (564)
.+.|++.+.||+|+||.||+|.+. ++.||||++.... ..+.+.+|+.++++++ ||||+++++++.... .+|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-----TSHHHHHHHHHHHTCC-CTTBCCEEEEEECTTSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-----HHHHHHHHHHHHHhcc-CCCEEEEEEEEEcCCCceE
Confidence 466999999999999999999964 7799999997542 3467889999999997 999999999987654 799
Q ss_pred EEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
||||||++|+|.+++...+. +++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 264 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTSCEEECCCTTCEECC
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---CCCCCEEEeeCCCccccc
Confidence 99999999999999987654 7999999999999999999999999999999999999 778899999999998654
Q ss_pred CCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.. .....+++.|+|||++.+ .++.++|||||||++|||++ |..||.+....++...+.++... .....+++.+
T Consensus 341 ~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~---~~p~~~~~~l 415 (450)
T 1k9a_A 341 ST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM---DAPDGCPPAV 415 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCC---CCCTTCCHHH
T ss_pred cc--ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCcCCHHH
Confidence 32 223467889999999974 59999999999999999998 99999988888888888776422 2235689999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhc
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+||.+||..||.+|||+.++++
T Consensus 416 ~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 416 YDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999999999999864
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=355.15 Aligned_cols=248 Identities=28% Similarity=0.442 Sum_probs=212.9
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec----
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED---- 171 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---- 171 (564)
.+..+|++.+.||+|+||.||+|.+..+++.||+|++.... +.+.+|+.+++.++ ||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 79 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLD-HVNIVHYNGCWDGFDYD 79 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCC-CTTBCCEEEEEEEEEEC
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCC-CCCEEEEeeeEeccccC
Confidence 45677999999999999999999999999999999996532 24668999999997 9999999998864
Q ss_pred ------------CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC
Q 008475 172 ------------SLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD 237 (564)
Q Consensus 172 ------------~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~ 237 (564)
...+++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +
T Consensus 80 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~ 156 (284)
T 2a19_B 80 PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL---V 156 (284)
T ss_dssp ---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---E
T ss_pred cccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE---c
Confidence 45689999999999999999754 579999999999999999999999999999999999999 5
Q ss_pred CCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 008475 238 DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG 316 (564)
Q Consensus 238 ~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~ 316 (564)
.++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||... ......+..+
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~ 234 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDG 234 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTT
T ss_pred CCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhcc
Confidence 677899999999988766555566789999999999985 5899999999999999999999987432 2333444443
Q ss_pred CccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 317 HIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 317 ~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.. ...+++.+.+||.+||..||.+|||+.++++|++.-..
T Consensus 235 ~~------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 235 II------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp CC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred cc------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 22 24578999999999999999999999999999887553
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=362.51 Aligned_cols=246 Identities=20% Similarity=0.238 Sum_probs=198.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC----e
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL----C 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~----~ 174 (564)
++|++.+.||+|+||.||+|++. ++.||||++... .........|+.++++++ ||||+++++++.... .
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMK-HENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGG----GHHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSEE
T ss_pred hhchhhheecccCceEEEEEEEC--CCEEEEEEeecC----chHHHHHHHHHHHHhcCC-CCCchhhcceeccCCCCCce
Confidence 46999999999999999999864 789999999643 233445567999999997 999999999998743 4
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC----------CCEeecCCCCcEEeecCCCCCcEEE
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL----------GVMHRDLKPENFLLVNKDDDFSLKA 244 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~----------~iiH~Dlkp~NIll~~~~~~~~~kl 244 (564)
+++|||||++|+|.+++.. ..+++..+..++.||+.||.|||+. ||+||||||+|||+ +.++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill---~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE---CTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE---CCCCeEEE
Confidence 7999999999999999866 4599999999999999999999999 99999999999999 77889999
Q ss_pred eeCCCccccCCCC---ceecccCCCcccchhhhhh------cCCCcchHHHHHHHHHHHHhCCCCCCCCC----------
Q 008475 245 IDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK------HYGPEADVWTAGVILYILLSGVPPFWAET---------- 305 (564)
Q Consensus 245 ~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~pf~~~~---------- 305 (564)
+|||++....... ......||+.|+|||++.+ .++.++|||||||++|||++|+.||.+..
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 9999997664432 2334679999999999974 46678999999999999999999996532
Q ss_pred ------HHHHHHHHHcCCccCCCCC-C--CCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 306 ------QQGIFDAVLKGHIDFESDP-W--PLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 306 ------~~~~~~~i~~~~~~~~~~~-~--~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
...+...+........... + ...++++.+||.+||+.||++|||+.+|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 2223333333222211110 0 112356999999999999999999999975
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=357.39 Aligned_cols=251 Identities=20% Similarity=0.338 Sum_probs=209.0
Q ss_pred cccceeecccccccCCeEEEEEEEccCC----cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATG----IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
....|++.+.||+|+||.||+|.+..++ ..||+|++.... .......+.+|+.+++.+. ||||+++++++...
T Consensus 42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 118 (333)
T 1mqb_A 42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFS-HHNIIRLEGVISKY 118 (333)
T ss_dssp CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSS
T ss_pred ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEecC
Confidence 3466999999999999999999976553 359999996543 4555667899999999997 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 173 LCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
...+|||||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSR 195 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC--
T ss_pred CCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE---CCCCcEEECCCCcch
Confidence 9999999999999999999764 579999999999999999999999999999999999999 778899999999998
Q ss_pred ccCCCC----ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCC
Q 008475 252 FFKPGQ----IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPW 325 (564)
Q Consensus 252 ~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 325 (564)
...... ......+|+.|+|||++.+ .++.++|||||||++|+|++ |..||......++...+..+... +..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~---~~~ 272 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL---PTP 272 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC---CCC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcC---CCc
Confidence 764322 1122345778999999974 58999999999999999999 99999998888888888766322 123
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
..+++.+.+||.+||..||.+||++.+++++
T Consensus 273 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 273 MDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 4689999999999999999999999998764
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-44 Score=378.79 Aligned_cols=248 Identities=23% Similarity=0.344 Sum_probs=216.0
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|++.+.||+|+||.||+|.+..++..||||++..... ..+.+.+|+.++++++ ||||+++++++.....+|
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~ 292 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFY 292 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcC-CCCEeeEEEEEecCCcEE
Confidence 34569999999999999999999999999999999975432 3567899999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
||||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGGCEEECCTTCEECCT
T ss_pred EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE---CCCCcEEEeecccceecc
Confidence 999999999999999764 458999999999999999999999999999999999999 677899999999998765
Q ss_pred CCCce--ecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQIF--TDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
..... ....+++.|+|||++. +.++.++|||||||++|||++ |..||.+.+..++.+.+..+... .....+++
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 446 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---ERPEGCPE 446 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---CCCTTCCH
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCH
Confidence 43321 2334567899999998 469999999999999999999 99999998888888777665322 22356899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+.+||.+||+.||.+|||+.+|++
T Consensus 447 ~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 447 KVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9999999999999999999999976
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=353.02 Aligned_cols=253 Identities=22% Similarity=0.281 Sum_probs=206.7
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCC-ccEEEEEEecCCe
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN-IVTIKGAYEDSLC 174 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n-iv~~~~~~~~~~~ 174 (564)
.+.++|++.+.||+|+||.||+|++..+++.||+|++..... .+.+.+|+.+++.+. |++ +..+..++.....
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~~~ 79 (296)
T 3uzp_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQ-GGVGIPTIRWCGAEGDY 79 (296)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHT-TSTTCCCEEEEEEETTE
T ss_pred eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhh-cCCCCCccccccCCCCc
Confidence 355779999999999999999999999999999999865432 235789999999998 655 4555555577888
Q ss_pred EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++||||+ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+|||++...
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 80 NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred eEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99999999 9999999874 457999999999999999999999999999999999999954446778999999999876
Q ss_pred CCCCc--------eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCccCC
Q 008475 254 KPGQI--------FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET---QQGIFDAVLKGHIDFE 321 (564)
Q Consensus 254 ~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~~~ 321 (564)
..... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.. ....+..+.......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence 54322 245679999999999985 58999999999999999999999997633 2234444443332222
Q ss_pred C-CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 322 S-DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 322 ~-~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
. .....+|+++.+||.+||+.||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 1 112458899999999999999999999999875
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-44 Score=359.62 Aligned_cols=249 Identities=21% Similarity=0.294 Sum_probs=205.2
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEE----EEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEF----ACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~v----avK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
.++|++.+.||+|+||.||+|.+..+++.| |+|.+.... .....+.+.+|+.+++.++ ||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVD-NPHVCRLLGICLTST 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTCC-BTTBCCCCEEEESSS
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhCC-CCCeeEEEEEEecCC
Confidence 356999999999999999999998888765 666554322 3345678899999999997 999999999998765
Q ss_pred eEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 174 CVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
.++|+||+.+|+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCTTC---
T ss_pred -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEE---cCCCCEEEccCcceeE
Confidence 8899999999999999976 4569999999999999999999999999999999999999 6677899999999987
Q ss_pred cCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 253 FKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 253 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
..... ......+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....++...+..+.... ....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~ 243 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---QPPI 243 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCTT
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---CCcc
Confidence 64332 2233456778999999985 58999999999999999999 999999988888877776654322 2345
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
++.++.+||.+||..||.+|||+.++++.
T Consensus 244 ~~~~l~~li~~~l~~dp~~Rps~~ell~~ 272 (327)
T 3lzb_A 244 CTIDVYMIMRKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp BCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 89999999999999999999999999873
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=368.40 Aligned_cols=257 Identities=14% Similarity=0.137 Sum_probs=195.7
Q ss_pred ccccceeecccccccCCeEEEEEEEccC-----CcEEEEEEeccccCCCHHh--------HHHHHHHHHHHHhhcCCCCc
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIAT-----GIEFACKSISKRKLISRED--------VEDVRREIQIMHHLAGHKNI 162 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~--------~~~~~~E~~~l~~l~~h~ni 162 (564)
...+.|++.+.||+|+||.||+|.+..+ ++.||||++.......... ......|+..++.+. ||||
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~~i 110 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLK-YLGV 110 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCS-CCCS
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhcc-CCCC
Confidence 3445799999999999999999998764 5789999986542100000 011233445555565 9999
Q ss_pred cEEEEEEecC----CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC
Q 008475 163 VTIKGAYEDS----LCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD 237 (564)
Q Consensus 163 v~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~ 237 (564)
+++++++... ...||||||| |++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+.. +
T Consensus 111 v~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~-~ 188 (364)
T 3op5_A 111 PKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-K 188 (364)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES-S
T ss_pred CeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec-C
Confidence 9999998764 5689999999 99999999775 67999999999999999999999999999999999999942 1
Q ss_pred CCCcEEEeeCCCccccCCCC--------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH
Q 008475 238 DDFSLKAIDFGLSVFFKPGQ--------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQG 308 (564)
Q Consensus 238 ~~~~~kl~DfG~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~ 308 (564)
.++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.....
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 67899999999997654322 1134569999999999986 49999999999999999999999998543221
Q ss_pred H-HHHHHcC---C-ccCC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 309 I-FDAVLKG---H-IDFE--SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 309 ~-~~~i~~~---~-~~~~--~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
. ....... . ..+. ......+++++.+||..||..||.+||++.++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 269 KYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 1 1111100 0 0000 0011457899999999999999999999998875
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=377.10 Aligned_cols=253 Identities=26% Similarity=0.363 Sum_probs=197.8
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|.+.+.||+|+||+||. ....+++.||||++..... ..+.+|+.+|+.+.+||||+++++++.+....||||
T Consensus 25 ~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp EEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 489999999999999764 3457899999999865321 235679999999956999999999999999999999
Q ss_pred eccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecC--CCCCcEEEeeCCCccccCCC
Q 008475 180 ELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNK--DDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~--~~~~~~kl~DfG~~~~~~~~ 256 (564)
|||. |+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+..+ +....+||+|||++......
T Consensus 98 E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp ECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred ECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 9995 69999987654 45666778999999999999999999999999999999532 23346889999999876533
Q ss_pred ----CceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 257 ----QIFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 257 ----~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
......+||+.|+|||++. ..++.++|||||||++|+|++ |..||...........+...... ...+...
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~ 255 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLD-CLHPEKH 255 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCT-TSCTTCH
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCcc-ccCcccc
Confidence 2334578999999999996 347889999999999999999 99999665544332222211111 1111223
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.+..+.+||.+||+.||.+|||+.+|++||||..
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~ 289 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence 4567899999999999999999999999999975
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=351.72 Aligned_cols=253 Identities=24% Similarity=0.414 Sum_probs=200.6
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
.+...++|++.+.||+|+||.||+|++. ..||+|++.... ......+.+.+|+.++++++ ||||++++++. ...
T Consensus 19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~-~~~ 92 (289)
T 3og7_A 19 WEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTR-HVNILLFMGYS-TAP 92 (289)
T ss_dssp CBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSS-CCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEE-CSS
T ss_pred CccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccC-CCHHHHHHHHHHHHHHHhCC-CCcEEEEEeec-cCC
Confidence 3445677999999999999999999853 359999996543 35666788999999999997 99999999955 556
Q ss_pred eEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 174 CVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATE 169 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTTEEEECCCC----
T ss_pred ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE---CCCCCEEEccceeccc
Confidence 78999999999999998854 4569999999999999999999999999999999999999 6678999999999976
Q ss_pred cCC---CCceecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCccCCC-C
Q 008475 253 FKP---GQIFTDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLKGHIDFES-D 323 (564)
Q Consensus 253 ~~~---~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~-~ 323 (564)
... ........||+.|+|||++. ..++.++|||||||++|+|++|..||..... ..+...+..+...... .
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
T 3og7_A 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 249 (289)
T ss_dssp --------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTS
T ss_pred cccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhh
Confidence 542 22334567999999999985 3478899999999999999999999987554 4455555555443322 2
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 324 ~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
....+++.+.+||.+||..||.+|||+.++++
T Consensus 250 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 250 VRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 23468899999999999999999999999986
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=355.83 Aligned_cols=251 Identities=23% Similarity=0.345 Sum_probs=204.7
Q ss_pred ccceeecccccccCCeEEEEEEEcc---CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL- 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 173 (564)
.++|.+.+.||+|+||.||+|.+.. ++..||+|++..... .....+.+.+|+.++++++ ||||+++++++.+..
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFS-HPNVIRLLGVCIEMSS 110 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEC---
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCC-CCCeeeeeEEEeeccc
Confidence 3569999999999999999998765 456899999875432 4556778999999999997 999999999997654
Q ss_pred ----eEEEEEeccCCCchHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEE
Q 008475 174 ----CVHIVMELCAGGELFDRIIQ------RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLK 243 (564)
Q Consensus 174 ----~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~k 243 (564)
..++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML---RDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE---CTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEE
Confidence 45999999999999999843 3569999999999999999999999999999999999999 7778999
Q ss_pred EeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCc
Q 008475 244 AIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHI 318 (564)
Q Consensus 244 l~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~ 318 (564)
|+|||++....... ......+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+..+..
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 267 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHR 267 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCC
Confidence 99999998664332 1233456789999999975 58999999999999999999 9999999888888888777643
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 319 DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 319 ~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
. .....+++.+.+||.+||..||.+|||+.+++++
T Consensus 268 ~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 302 (313)
T 3brb_A 268 L---KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302 (313)
T ss_dssp C---CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred C---CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2 2234688999999999999999999999999865
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=373.95 Aligned_cols=247 Identities=22% Similarity=0.327 Sum_probs=212.7
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...+.|++.+.||+|+||.||+|.+. ++..||||++.... ...+.+.+|+.+++.++ ||||+++++++. ...+
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~-~~~~ 257 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQ-HDKLVKLHAVVT-KEPI 257 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS----BCHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSSC
T ss_pred echHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC----ccHHHHHHHHHHHhhCC-CCCEeeEEEEEe-CCcc
Confidence 34567999999999999999999975 46789999997543 23567899999999997 999999999986 5678
Q ss_pred EEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 176 HIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
|||||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVI 334 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTCCEEECSTTGGGGB
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE---CCCCcEEEeeCCCceEc
Confidence 9999999999999999754 368999999999999999999999999999999999999 77889999999999876
Q ss_pred CCCCc--eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 254 KPGQI--FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 254 ~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
..... .....+++.|+|||++. +.++.++|||||||++|||++ |+.||.+.+..++...+..+... +....++
T Consensus 335 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~~ 411 (454)
T 1qcf_A 335 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM---PRPENCP 411 (454)
T ss_dssp CCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCC---CCCTTSC
T ss_pred CCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCC
Confidence 43221 12344677899999998 569999999999999999999 99999999988888888776332 2234689
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+++.+||.+||..||++|||+++|+.
T Consensus 412 ~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 412 EELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHH
Confidence 99999999999999999999999876
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=363.45 Aligned_cols=253 Identities=21% Similarity=0.311 Sum_probs=206.1
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|++.+.||+|+||.||+|.+ .+++.||+|++... .....+.+.+|+.+++.++ ||||+++++++......+
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPE---SSQGIEEFETEIETLSFCR-HPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSC---CSSHHHHHHHHHHGGGSCC-CTTBCCEEEECCCTTCCE
T ss_pred HHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEeccc---ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEE
Confidence 345699999999999999999996 46899999988654 2345677899999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 177 IVMELCAGGELFDRIIQRG----HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
+||||+++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKK 188 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE---CTTCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE---CCCCCEEEeecccccc
Confidence 9999999999999886543 58999999999999999999999999999999999999 7788999999999976
Q ss_pred cCCC---CceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHcCCccC-
Q 008475 253 FKPG---QIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIF-------DAVLKGHIDF- 320 (564)
Q Consensus 253 ~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~-------~~i~~~~~~~- 320 (564)
.... .......||+.|+|||++. +.++.++|||||||++|+|++|+.||....+.+.. .....+....
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence 4322 2233456899999999987 46999999999999999999999999765432211 1111111110
Q ss_pred -----CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCC
Q 008475 321 -----ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHP 357 (564)
Q Consensus 321 -----~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp 357 (564)
.....+.++..+.+++.+||..||++|||+.++++|.
T Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 310 (321)
T 2qkw_B 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310 (321)
T ss_dssp SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 0111122456789999999999999999999998763
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=351.16 Aligned_cols=249 Identities=26% Similarity=0.394 Sum_probs=204.1
Q ss_pred ccceeecccccccCCeEEEEEE----EccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC-
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS- 172 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 172 (564)
...|++.+.||+|+||.||+|. +..+++.||+|++.... .....+.+.+|+.+++.++ ||||+++++++...
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HENIVKYKGICTEDG 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCC-CTTBCCEEEEEEC--
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCeeeeeeEEecCC
Confidence 3559999999999999999999 56789999999997543 3445678899999999997 99999999999876
Q ss_pred -CeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 173 -LCVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 173 -~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
..+++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLT 173 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTC
T ss_pred CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEE---cCCCCEEECccccc
Confidence 679999999999999999954 4579999999999999999999999999999999999999 56779999999999
Q ss_pred cccCCCCc----eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCC--------------C-HHHHH
Q 008475 251 VFFKPGQI----FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAE--------------T-QQGIF 310 (564)
Q Consensus 251 ~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~--------------~-~~~~~ 310 (564)
........ .....+|..|+|||++.+ .++.++|||||||++|+|++|..|+... . .....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 87654432 234567888999999975 5889999999999999999999886322 1 11223
Q ss_pred HHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 311 DAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 311 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
..+..+.. ......+++.+.+||.+||..||.+|||+.++++
T Consensus 254 ~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 254 NTLKEGKR---LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HHHHTTCC---CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHhccCC---CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 33333321 2233568999999999999999999999999875
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=352.36 Aligned_cols=252 Identities=24% Similarity=0.314 Sum_probs=204.7
Q ss_pred ccceeecccccccCCeEEEEEEEcc-CCc--EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIA-TGI--EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
.++|++.+.||+|+||.||+|.+.. ++. .||+|++...........+.+.+|+.+++++. ||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCC-CCCcccEEEEEccCC-
Confidence 3569999999999999999998643 333 68999987654444556778999999999997 999999999998765
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++||||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCTTCEEC
T ss_pred ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE---cCCCCEEEccccccccc
Confidence 88999999999999998764 569999999999999999999999999999999999999 56678999999999876
Q ss_pred CCCCc----eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 254 KPGQI----FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 254 ~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
..... .....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||.+.+..+....+.......+. ...
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 249 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--PED 249 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--CTT
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCC--CcC
Confidence 54332 223457778999999975 58899999999999999999 99999999988888888766544332 356
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+++++.++|.+||..||.+|||+.+++++
T Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 278 (291)
T 1u46_A 250 CPQDIYNVMVQCWAHKPEDRPTFVALRDF 278 (291)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 89999999999999999999999999863
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=345.68 Aligned_cols=247 Identities=21% Similarity=0.315 Sum_probs=211.5
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...++|++.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.+++.+. ||||+++++++.. ...
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~-~~~ 82 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPI 82 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSC
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc----cHHHHHHHHHHHHhCC-CcCcceEEEEEcC-CCc
Confidence 44577999999999999999999975 567899999865432 3467889999999997 9999999998864 468
Q ss_pred EEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 176 HIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 83 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~ 159 (279)
T 1qpc_A 83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLI 159 (279)
T ss_dssp EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE---cCCCCEEECCCcccccc
Confidence 99999999999999886543 69999999999999999999999999999999999999 77889999999999876
Q ss_pred CCCCce--ecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 254 KPGQIF--TDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 254 ~~~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
...... ....+++.|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+.++... .....++
T Consensus 160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~ 236 (279)
T 1qpc_A 160 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---VRPDNCP 236 (279)
T ss_dssp SSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCC
T ss_pred cCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC---CCccccc
Confidence 543322 2345678899999998 458999999999999999999 99999998888888887765332 2234689
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+++.+||.+||..||++|||+.++++
T Consensus 237 ~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 237 EELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99999999999999999999999875
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-44 Score=353.49 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=201.5
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+.+++.+..|++|..+..++......
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 355779999999999999999999999999999998764332 235778999999998444445555555788899
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++||||+ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+|||++....
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999999 9999999875 4579999999999999999999999999999999999999544567789999999998765
Q ss_pred CCCc--------eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCccCCC
Q 008475 255 PGQI--------FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ---QGIFDAVLKGHIDFES 322 (564)
Q Consensus 255 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~~~~~~~ 322 (564)
.... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+... ...+..+.......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 4321 235679999999999985 589999999999999999999999976432 2233333332222221
Q ss_pred -CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 323 -DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 323 -~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.....+|+++.+||.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 112457899999999999999999999999876
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=356.99 Aligned_cols=248 Identities=24% Similarity=0.360 Sum_probs=208.2
Q ss_pred cceeecccccccCCeEEEEEE----EccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe--cC
Q 008475 99 DLYTLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE--DS 172 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~--~~ 172 (564)
++|++.+.||+|+||.||+|+ +..+++.||+|++... .....+.+.+|+.+++++. ||||+++++++. ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALH-SDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCC
Confidence 569999999999999999999 5678899999999654 4556678999999999996 999999999886 56
Q ss_pred CeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 173 LCVHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
..+++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAK 175 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCGGGCE
T ss_pred ceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEE---CCCCCEEEcccccce
Confidence 779999999999999999976 4569999999999999999999999999999999999999 667889999999998
Q ss_pred ccCCCCc----eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH---------------HHHH
Q 008475 252 FFKPGQI----FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ---------------GIFD 311 (564)
Q Consensus 252 ~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~---------------~~~~ 311 (564)
....... .....+|+.|+|||++.+ .++.++|||||||++|+|++|..||...... .+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE 255 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence 7654332 233567888999999985 5899999999999999999999998654332 2233
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 312 AVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 312 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+..+.. ......+++.+.+||.+||..||.+|||+.+++++
T Consensus 256 ~~~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 256 LLEEGQR---LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp HHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhhcccC---CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 3333321 22235689999999999999999999999999654
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=357.44 Aligned_cols=247 Identities=28% Similarity=0.438 Sum_probs=189.1
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe-------
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE------- 170 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~------- 170 (564)
..+|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.+++++.+||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 34699999999999999999999999999999998543 45566788999999999977999999999993
Q ss_pred -cCCeEEEEEeccCCCchHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCCCCCcEEE
Q 008475 171 -DSLCVHIVMELCAGGELFDRIIQ---RGHYSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKA 244 (564)
Q Consensus 171 -~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~~~~~~kl 244 (564)
....+++||||+. |+|.+++.. .+.+++..+..++.||+.||.|||++| |+||||||+|||+ +.++.+||
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~---~~~~~~kl 179 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKL 179 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE---CTTSCEEB
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE---CCCCCEEE
Confidence 4456899999995 789888865 467999999999999999999999999 9999999999999 77789999
Q ss_pred eeCCCccccCCCCce-------------ecccCCCcccchhhhh----hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHH
Q 008475 245 IDFGLSVFFKPGQIF-------------TDVVGSPYYVAPEVLL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQ 307 (564)
Q Consensus 245 ~DfG~~~~~~~~~~~-------------~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~ 307 (564)
+|||++......... ....||+.|+|||++. ..++.++|||||||++|+|++|..||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 999999876533211 1456899999999983 34788999999999999999999999766544
Q ss_pred HHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCC
Q 008475 308 GIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHP 357 (564)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp 357 (564)
.... +.... .....++..+.+||.+||+.||.+|||+.++++|.
T Consensus 260 ~~~~----~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l 303 (337)
T 3ll6_A 260 RIVN----GKYSI--PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL 303 (337)
T ss_dssp ----------CCC--CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred Hhhc----CcccC--CcccccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 3322 22222 22345778899999999999999999999999874
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=349.17 Aligned_cols=248 Identities=23% Similarity=0.334 Sum_probs=207.7
Q ss_pred cceeecccccccCCeEEEEEEEccCC---cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEE-ecCCe
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATG---IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY-EDSLC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~-~~~~~ 174 (564)
.+|++.+.||+|+||.||+|.+..++ ..||+|.+... ......+.+.+|+.++++++ ||||+++++++ ..+..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGS 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSSSC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCC-CCCEeeeeeEEEcCCCc
Confidence 45999999999999999999965433 46899988653 25566778999999999997 99999999985 45678
Q ss_pred EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDM 178 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSCGGGCCC
T ss_pred eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---CCCCCEEECcccccccc
Confidence 8999999999999999976 3458999999999999999999999999999999999999 77889999999999865
Q ss_pred CCCC-----ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 254 KPGQ-----IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 254 ~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
.... ......+|+.|+|||++.+ .++.++|||||||++|+|++ |.+||......+....+..+...... .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 255 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP---E 255 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC---T
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC---c
Confidence 4322 2234567788999999975 58999999999999999999 67778777777777777766544332 4
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.+++.+.++|.+||..||.+|||+.++++
T Consensus 256 ~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 256 YCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 57899999999999999999999999876
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=355.45 Aligned_cols=249 Identities=24% Similarity=0.324 Sum_probs=204.6
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe----cCC
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE----DSL 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~----~~~ 173 (564)
.++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++.+. ||||+++++++. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFN-HPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEEEETTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcC-CCCeeeEEEEEEeccCCCc
Confidence 35699999999999999999999999999999998653 4556778899999999997 999999999987 345
Q ss_pred eEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 174 CVHIVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
..++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL---GDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---cCCCCEEEEecCc
Confidence 78999999999999998875 4679999999999999999999999999999999999999 7778999999999
Q ss_pred ccccCCCC----------ceecccCCCcccchhhhhh----cCCCcchHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHH
Q 008475 250 SVFFKPGQ----------IFTDVVGSPYYVAPEVLLK----HYGPEADVWTAGVILYILLSGVPPFWAET--QQGIFDAV 313 (564)
Q Consensus 250 ~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~pf~~~~--~~~~~~~i 313 (564)
+....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.... .......+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 87643211 1123457999999999863 37899999999999999999999995321 11122222
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 314 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.. .... +....+++++.+||.+||..||.+|||+.+++++
T Consensus 261 ~~-~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 261 QN-QLSI--PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HC-C--C--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hc-cCCC--CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 22 2222 2335689999999999999999999999999987
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=347.38 Aligned_cols=247 Identities=23% Similarity=0.342 Sum_probs=208.5
Q ss_pred ceeecccccccCCeEEEEEEEccCCc---EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE-
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGI---EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV- 175 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~- 175 (564)
.|.+.+.||+|+||.||+|.+..++. .||+|++... ......+.+.+|+.+++.+. ||||+++++++.+....
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLN-HPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEecCCCCc
Confidence 47788999999999999999766554 7999998643 25566788999999999997 99999999999876555
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++||||+.+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDIL 175 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECCTTSSCTTT
T ss_pred EEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEEeCcCCCccccc
Confidence 999999999999999976 4568999999999999999999999999999999999999 778899999999997654
Q ss_pred CCC-----ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 255 PGQ-----IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 255 ~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
... ......+++.|+|||.+.+ .++.++|||||||++|+|++ |.+||......+....+..+.... ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 252 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP---QPEY 252 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC---CCTT
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC---CCcc
Confidence 322 2234567889999999985 58999999999999999999 555666677777777776654322 2345
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+++.+.+||.+||..||.+|||+.++++
T Consensus 253 ~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 253 CPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 8899999999999999999999999876
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=363.37 Aligned_cols=257 Identities=18% Similarity=0.152 Sum_probs=197.7
Q ss_pred cccceeecccccccCCeEEEEEEEcc---CCcEEEEEEeccccCCCHH--------hHHHHHHHHHHHHhhcCCCCccEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISRE--------DVEDVRREIQIMHHLAGHKNIVTI 165 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vavK~~~~~~~~~~~--------~~~~~~~E~~~l~~l~~h~niv~~ 165 (564)
..++|++.+.||+|+||.||+|.+.. ++..||+|++......... ....+.+|+.+++.+. ||||+++
T Consensus 35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~ni~~~ 113 (345)
T 2v62_A 35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLD-YLGIPLF 113 (345)
T ss_dssp TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCS-CCCCCCE
T ss_pred cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcccc-ccCccee
Confidence 44679999999999999999999987 7889999998754311000 1123567888888886 9999999
Q ss_pred EEEEec----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCc
Q 008475 166 KGAYED----SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFS 241 (564)
Q Consensus 166 ~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~ 241 (564)
++++.. ....|+||||+ +++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+..+ ..+.
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~~~ 191 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK-NPDQ 191 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS-STTS
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC-CCCc
Confidence 999987 78899999999 99999999887789999999999999999999999999999999999999432 2238
Q ss_pred EEEeeCCCccccCCCC--------ceecccCCCcccchhhhhhc-CCCcchHHHHHHHHHHHHhCCCCCCCC--CHHHHH
Q 008475 242 LKAIDFGLSVFFKPGQ--------IFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAE--TQQGIF 310 (564)
Q Consensus 242 ~kl~DfG~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~pf~~~--~~~~~~ 310 (564)
+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+. ......
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 9999999997654221 12456799999999999864 899999999999999999999999653 222222
Q ss_pred HHHHcCCccCCC-----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 311 DAVLKGHIDFES-----DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 311 ~~i~~~~~~~~~-----~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
..........+. .+...+++++.+||.+||..||.+|||+.+|++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 322 (345)
T 2v62_A 272 TAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI 322 (345)
T ss_dssp HHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred HHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence 111111111110 0112688999999999999999999999998773
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=350.99 Aligned_cols=247 Identities=24% Similarity=0.319 Sum_probs=196.2
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHh--hcCCCCccEEEEEEec--
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH--LAGHKNIVTIKGAYED-- 171 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~~h~niv~~~~~~~~-- 171 (564)
.+.++|++.+.||+|+||.||+|++ +++.||||++... ....+..|.+++.. ++ ||||+++++++..
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~-h~niv~~~~~~~~~~ 75 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------DEKSWFRETELYNTVMLR-HENILGFIASDMTSR 75 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCC-CTTBCCEEEEEEEEE
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------cchhhHHHHHHHHHhhcc-CcCeeeEEEeecccc
Confidence 4567899999999999999999986 6889999998643 33456667777776 55 9999999998654
Q ss_pred --CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCCEeecCCCCcEEeecCCCCCc
Q 008475 172 --SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH--------SLGVMHRDLKPENFLLVNKDDDFS 241 (564)
Q Consensus 172 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~iiH~Dlkp~NIll~~~~~~~~ 241 (564)
...+++||||+++|+|.+++. ...+++..+..++.||+.||.||| ++||+||||||+|||+ +.++.
T Consensus 76 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill---~~~~~ 151 (301)
T 3q4u_A 76 HSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQ 151 (301)
T ss_dssp TTEEEEEEEECCCTTCBHHHHHT-TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE---CTTSC
T ss_pred CCCceeEEehhhccCCCHHHHHh-hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE---cCCCC
Confidence 356899999999999999885 457999999999999999999999 9999999999999999 77889
Q ss_pred EEEeeCCCccccCCCCc-----eecccCCCcccchhhhhh-------cCCCcchHHHHHHHHHHHHhC----------CC
Q 008475 242 LKAIDFGLSVFFKPGQI-----FTDVVGSPYYVAPEVLLK-------HYGPEADVWTAGVILYILLSG----------VP 299 (564)
Q Consensus 242 ~kl~DfG~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~DvwSlG~il~elltg----------~~ 299 (564)
+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|||++| ..
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 99999999976543322 223579999999999975 345689999999999999999 88
Q ss_pred CCCCCCH----HHHHHHHHcCCccCCCCC----CCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 300 PFWAETQ----QGIFDAVLKGHIDFESDP----WPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 300 pf~~~~~----~~~~~~i~~~~~~~~~~~----~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
||..... ......+.......+..+ ...+++.+.+||.+||..||.+|||+.+|++
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence 9865321 222222222111111111 0124578999999999999999999999975
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=345.63 Aligned_cols=242 Identities=23% Similarity=0.312 Sum_probs=201.0
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-CCeEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-SLCVH 176 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-~~~~~ 176 (564)
.++|++.+.||+|+||.||+|.+ +++.||+|++.... ..+.+.+|+.++++++ ||||+++++++.. ...++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-----HHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCCceE
Confidence 35699999999999999999986 48899999986432 3567889999999997 9999999998754 45789
Q ss_pred EEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+||||+++++|.+++...+. +++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC-----
T ss_pred EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE---eCCCcEEEeecccccccc
Confidence 99999999999999976543 8999999999999999999999999999999999999 777899999999987654
Q ss_pred CCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.. .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||......+....+..+.. ......+++.+
T Consensus 169 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 243 (278)
T 1byg_A 169 ST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPAV 243 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC---CCCCTTCCHHH
T ss_pred cc--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCcccCCHHH
Confidence 32 233467889999999974 58999999999999999998 9999998888888777766532 22335689999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhc
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.++|.+||..||.+|||+.++++
T Consensus 244 ~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 244 YEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhcCChhhCCCHHHHHH
Confidence 99999999999999999999875
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=362.75 Aligned_cols=248 Identities=23% Similarity=0.330 Sum_probs=200.9
Q ss_pred ceeecccccccCCeEEEEEEEccCC---cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe-cCCeE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATG---IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE-DSLCV 175 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~-~~~~~ 175 (564)
.|++.+.||+|+||.||+|.+..++ ..||+|.+... ......+.+.+|+.++++++ ||||+++++++. .+...
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCC-CTTBCCCCEEECCCSSCC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCCCe
Confidence 4888999999999999999976433 46899988643 24456778999999999997 999999999865 45688
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 167 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC-------
T ss_pred EEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE---CCCCCEEEeecccccccc
Confidence 9999999999999999764 458999999999999999999999999999999999999 778899999999998654
Q ss_pred CCC-----ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 255 PGQ-----IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 255 ~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
... ......+++.|+|||++.+ .++.++|||||||++|||++ |.+||...+..+....+..+..... ...
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~---p~~ 320 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PEY 320 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC---CTT
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC---CCC
Confidence 322 1233456788999999975 58999999999999999999 7888888777777777776654322 245
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+++.+.++|.+||..||.+|||+.+++++
T Consensus 321 ~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 321 CPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 89999999999999999999999999874
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=356.48 Aligned_cols=256 Identities=23% Similarity=0.283 Sum_probs=204.5
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...++|++.+.||+|+||.||+|.+ .+++.||||++..... ......+.+|+.+++.+. ||||+++++++.+....
T Consensus 27 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~ 102 (326)
T 3uim_A 27 VASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERT--QGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTER 102 (326)
T ss_dssp TTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-------CCCHHHHHHHGGGTCC-CTTBCCCCEEECCSSCC
T ss_pred HHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccC--chHHHHHHHHHHHHHhcc-CCCccceEEEEecCCce
Confidence 3456799999999999999999984 4689999999975432 222236889999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 176 HIVMELCAGGELFDRIIQRG----HYSERKAAELTRIIVGVVEACHSL---GVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
++||||+++|+|.+++.... .+++..+..++.||+.||.|||++ ||+||||||+|||+ +.++.+||+|||
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg 179 (326)
T 3uim_A 103 LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFG 179 (326)
T ss_dssp EEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE---CTTCCEEECCCS
T ss_pred EEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE---CCCCCEEeccCc
Confidence 99999999999999997643 489999999999999999999999 99999999999999 778899999999
Q ss_pred CccccCCC--CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHcCCccC
Q 008475 249 LSVFFKPG--QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWA-----ETQQGIFDAVLKGHIDF 320 (564)
Q Consensus 249 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~-----~~~~~~~~~i~~~~~~~ 320 (564)
++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .........+ .+....
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~ 258 (326)
T 3uim_A 180 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV-KGLLKE 258 (326)
T ss_dssp SCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH-TTTTSS
T ss_pred cccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH-HHHhhc
Confidence 99876432 23445669999999999974 689999999999999999999999952 1111111211 111100
Q ss_pred -----------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 321 -----------ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 321 -----------~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
........++.+.+|+.+||+.||.+|||+.+|++|-.-
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 000111234689999999999999999999999998653
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-43 Score=367.68 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=211.4
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
...+.|++.+.||+|+||.||+|.+.. +..||||++..... ..+.+.+|+.++++++ ||||+++++++.+ ...
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~-~~~ 253 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPI 253 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhCC-CCCEeeEEEEEcC-Cce
Confidence 345679999999999999999999864 46799999975432 2457889999999997 9999999999876 678
Q ss_pred EEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 176 HIVMELCAGGELFDRIIQ--RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
||||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~ 330 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 330 (452)
T ss_dssp EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCTTC--
T ss_pred EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE---CCCCCEEECCCccceec
Confidence 999999999999999964 3569999999999999999999999999999999999999 67789999999999876
Q ss_pred CCCCc--eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 254 KPGQI--FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 254 ~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
..... .....+++.|+|||++. +.++.++|||||||++|||++ |..||.+....++...+..+... +....++
T Consensus 331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~~ 407 (452)
T 1fmk_A 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---PCPPECP 407 (452)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTSC
T ss_pred CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCC
Confidence 43321 22345678899999987 469999999999999999999 99999999988888888776432 2234689
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhc--CCCcCCC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLC--HPWICEN 362 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~--hp~~~~~ 362 (564)
+.+.+||.+||..||++|||++++++ ..++...
T Consensus 408 ~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 99999999999999999999999987 3666543
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=388.40 Aligned_cols=260 Identities=27% Similarity=0.390 Sum_probs=212.8
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec------C
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED------S 172 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~------~ 172 (564)
++|++.+.||+|+||.||+|.+..+|+.||||++... ......+.+.+|+.+++++. ||||+++++++.. .
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLN-HPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHCC-BTTBCCEEECCTTTCCCCTT
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhCC-CCCCCceeeeecccccccCC
Confidence 5699999999999999999999999999999998653 25666778999999999997 9999999998765 6
Q ss_pred CeEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 LCVHIVMELCAGGELFDRIIQRG---HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
...|+|||||+||+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+..++....+||+|||+
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 77899999999999999997644 589999999999999999999999999999999999996544555699999999
Q ss_pred ccccCCCCceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHH---------HH-----HH
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIF---------DA-----VL 314 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~---------~~-----i~ 314 (564)
+.............||+.|+|||++. +.++.++|||||||++|+|++|..||.+....... .. ..
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l 250 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDL 250 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCC
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhh
Confidence 99877666666788999999999987 46999999999999999999999999765432111 00 01
Q ss_pred cCCccCC------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 315 KGHIDFE------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 315 ~~~~~~~------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.+...+. ......+++.+.+||.+||.+||.+|||+.++++||||..
T Consensus 251 ~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~ 303 (676)
T 3qa8_A 251 TGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303 (676)
T ss_dssp SSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred ccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence 1111111 1112236789999999999999999999999999999985
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=379.47 Aligned_cols=243 Identities=23% Similarity=0.255 Sum_probs=206.9
Q ss_pred cccccccCCeEEEEEEE--ccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEec
Q 008475 104 GRKLGQGQFGTTYLCTE--IATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMEL 181 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 181 (564)
.+.||+|+||.||+|.+ ..+++.||||++.... ......+.+.+|+.++++++ ||||+++++++.. ...+|||||
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~-~~~~lv~E~ 450 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLD-NPYIVRMIGICEA-ESWMLVMEM 450 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCC-CTTBCCEEEEEES-SSEEEEEEC
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEec-CCEEEEEEc
Confidence 34799999999999954 4566889999997543 24455678999999999997 9999999999875 458899999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC----
Q 008475 182 CAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---- 257 (564)
Q Consensus 182 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~---- 257 (564)
|++|+|.+++...+.+++..+..|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 451 ~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 451 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCTTHHHHTTC------
T ss_pred cCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEE---eCCCCEEEEEcCCccccccCccccc
Confidence 9999999999988899999999999999999999999999999999999999 667799999999998765432
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 335 (564)
......+|+.|+|||++.+ .++.++|||||||++|||++ |+.||.+....++...+.++.... ....+++++.+|
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~~l 604 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG---CPAGCPREMYDL 604 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTCCHHHHHH
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCCHHHHHH
Confidence 1223456788999999985 69999999999999999998 999999999988888888765332 224689999999
Q ss_pred HHHhcccCCCCCCCHHHHhc
Q 008475 336 IRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 336 i~~~l~~dp~~R~s~~~vl~ 355 (564)
|.+||..||++||++.+|++
T Consensus 605 i~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 605 MNLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHcCCCHhHCcCHHHHHH
Confidence 99999999999999999864
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=352.53 Aligned_cols=250 Identities=23% Similarity=0.336 Sum_probs=205.1
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccC-CCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKL-ISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
|..++.||+|+||.||+|.+ ++..||+|++..... ......+.+.+|+.+++.++ ||||+++++++.+....++||
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 109 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVELLGFSSDGDDLCLVY 109 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEE
T ss_pred cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC-CCCeEEEEEEEecCCceEEEE
Confidence 56678999999999999984 688999999875432 23445678999999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 180 ELCAGGELFDRIIQ---RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 180 e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~~ 186 (307)
T 2nru_A 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKF 186 (307)
T ss_dssp ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCSC
T ss_pred EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE---cCCCcEEEeecccccccccc
Confidence 99999999998864 3469999999999999999999999999999999999999 77889999999999865432
Q ss_pred C---ceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHcCCccC-------CC
Q 008475 257 Q---IFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQG----IFDAVLKGHIDF-------ES 322 (564)
Q Consensus 257 ~---~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~----~~~~i~~~~~~~-------~~ 322 (564)
. ......||+.|+|||++.+.++.++|||||||++|+|++|..||....... +...+......+ ..
T Consensus 187 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (307)
T 2nru_A 187 AQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN 266 (307)
T ss_dssp SSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCS
T ss_pred cccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccccc
Confidence 2 223457899999999999889999999999999999999999997654322 222222211110 01
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 323 ~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.....+++.+.++|.+||..||.+|||+.+++++
T Consensus 267 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~ 300 (307)
T 2nru_A 267 DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300 (307)
T ss_dssp CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1112345678999999999999999999999864
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-43 Score=351.74 Aligned_cols=249 Identities=26% Similarity=0.347 Sum_probs=204.8
Q ss_pred cccce-eecccccccCCeEEEEEE----EccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLY-TLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y-~~~~~lG~G~fg~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
+.++| ++.+.||+|+||.||+|. +..+++.||||++.... .....+.+.+|+.+++.++ ||||+++++++.+
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 104 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLY-HEHIIKYKGCCED 104 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEE
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCC-CcchhhEEEEEec
Confidence 44455 999999999999998875 34578899999997542 4566778999999999997 9999999999987
Q ss_pred --CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 172 --SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 172 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
...+++||||+++++|.+++... .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 105 AGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGL 180 (318)
T ss_dssp TTTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGG
T ss_pred CCCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---cCCCCEEECCccc
Confidence 46899999999999999988654 59999999999999999999999999999999999999 7778999999999
Q ss_pred ccccCCCCc----eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH---------------HH
Q 008475 250 SVFFKPGQI----FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ---------------GI 309 (564)
Q Consensus 250 ~~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~---------------~~ 309 (564)
+........ .....+|+.|+|||++.+ .++.++|||||||++|+|++|..||...... ..
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 260 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRL 260 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHH
T ss_pred cccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHH
Confidence 987654432 234567888999999985 5889999999999999999999999654321 12
Q ss_pred HHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 310 FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 310 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
...+..+.. ......+++++.+||.+||..||.+|||+.++++
T Consensus 261 ~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 261 TELLERGER---LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcccC---CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 222222221 2223568999999999999999999999999974
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=377.42 Aligned_cols=247 Identities=24% Similarity=0.315 Sum_probs=205.9
Q ss_pred cceeecc-cccccCCeEEEEEEEcc--CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGR-KLGQGQFGTTYLCTEIA--TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~-~lG~G~fg~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+.+.+.+ .||+|+||.||+|.+.. ++..||||++.... .....+.+.+|+.+|++++ ||||+++++++.. ..+
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~-hpniv~l~~~~~~-~~~ 410 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLD-NPYIVRLIGVCQA-EAL 410 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCC-CTTBCCEEEEEES-SSE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEecc-CCe
Confidence 3455555 79999999999998753 55679999997542 3345678999999999997 9999999999976 569
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+||||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 411 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl---~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 411 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL---VNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCSTTTTCC
T ss_pred EEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEE---cCCCcEEEeeccCccccc
Confidence 9999999999999998654 459999999999999999999999999999999999999 667899999999998764
Q ss_pred CCCc----eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 255 PGQI----FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 255 ~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
.... .....+++.|+|||++. +.++.++|||||||++|||++ |+.||.+.+..++...+.++.... ....+
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~ 564 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME---CPPEC 564 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCC---CCTTC
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---CCCcC
Confidence 3321 11234567899999998 469999999999999999998 999999988888888888765322 22468
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++++.+||.+||..||++||++.+|++
T Consensus 565 ~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 565 PPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp CHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 999999999999999999999999753
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=367.14 Aligned_cols=254 Identities=22% Similarity=0.278 Sum_probs=209.8
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
.+.++|++.++||+|+||.||+|.+..+++.||||++..... ...+..|+.+++.|..|++|+.+..++......
T Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~ 78 (483)
T 3sv0_A 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYN 78 (483)
T ss_dssp EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEE
T ss_pred CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEE
Confidence 355779999999999999999999999999999998865432 234778999999998667888888888889999
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+|||||+ +++|.+++.. .+.+++..++.|+.||+.||.|||++||+||||||+|||+...+..+.+||+|||++....
T Consensus 79 ~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 9999999 9999999975 5679999999999999999999999999999999999999544467889999999998765
Q ss_pred CCCc--------eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCccCC-
Q 008475 255 PGQI--------FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ---QGIFDAVLKGHIDFE- 321 (564)
Q Consensus 255 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~~~~~~- 321 (564)
.... .....||+.|+|||++.+ .++.++|||||||++|||++|+.||.+... ...+..+........
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI 237 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence 4322 225789999999999985 589999999999999999999999977443 333443333222111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 322 SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 322 ~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
......+++++.+||.+||..||++||++.+|++
T Consensus 238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 1112457899999999999999999999998765
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=359.19 Aligned_cols=245 Identities=14% Similarity=0.154 Sum_probs=200.7
Q ss_pred ccceeecccccccCCeEEEEEEEcc--------CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccE-----
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIA--------TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVT----- 164 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~----- 164 (564)
.++|++.+.||+|+||.||+|++.. .++.||+|++... +.+.+|+.+++++. ||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~-h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAA-KPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHC-CHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhc-ccchhhhhhhh
Confidence 4679999999999999999999987 4889999998753 35778999999997 999887
Q ss_pred ----------EEEEEec-CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008475 165 ----------IKGAYED-SLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENF 231 (564)
Q Consensus 165 ----------~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NI 231 (564)
+++++.. +...|+||||+ +++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NI 190 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI 190 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGE
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHE
Confidence 6777765 78899999999 99999999875 7899999999999999999999999999999999999
Q ss_pred EeecCCCCC--cEEEeeCCCccccCCCC--------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCC
Q 008475 232 LLVNKDDDF--SLKAIDFGLSVFFKPGQ--------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPP 300 (564)
Q Consensus 232 ll~~~~~~~--~~kl~DfG~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~p 300 (564)
|+ +.++ .+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.|
T Consensus 191 l~---~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 191 FV---DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp EE---ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred EE---cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 99 5555 89999999997654321 1234579999999999986 589999999999999999999999
Q ss_pred CCCCC--HHHHHHHHH---cCCccCC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 301 FWAET--QQGIFDAVL---KGHIDFE--SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 301 f~~~~--~~~~~~~i~---~~~~~~~--~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
|.... ...+..... .....+. ...+..+++++.+||.+||..||.+|||+.++++
T Consensus 268 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 329 (352)
T 2jii_A 268 WTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN 329 (352)
T ss_dssp TGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred cccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence 98753 333332222 1111111 1112357899999999999999999999999875
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=345.95 Aligned_cols=239 Identities=27% Similarity=0.381 Sum_probs=194.0
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.+.||+|+||.||+|++ .++.||+|++... ...+.+.+|+.++++++ ||||+++++++.+ ..++|
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~--~~~lv 77 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-----SERKAFIVELRQLSRVN-HPNIVKLYGACLN--PVCLV 77 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-----THHHHHHHHHHHHHHCC-CTTBCCEEEBCTT--TTEEE
T ss_pred hHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-----hHHHHHHHHHHHHhcCC-CCCcCeEEEEEcC--CcEEE
Confidence 4599999999999999999996 4788999998532 34567889999999997 9999999998774 47899
Q ss_pred EeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCEeecCCCCcEEeecCCCCCc-EEEeeCCCcc
Q 008475 179 MELCAGGELFDRIIQRG---HYSERKAAELTRIIVGVVEACHS---LGVMHRDLKPENFLLVNKDDDFS-LKAIDFGLSV 251 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~Dlkp~NIll~~~~~~~~-~kl~DfG~~~ 251 (564)
|||+++++|.+++.... .++...+..++.||+.||.|||+ +||+||||||+|||+ +.++. +||+|||++.
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll---~~~~~~~kl~Dfg~~~ 154 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL---VAGGTVLKICDFGTAC 154 (307)
T ss_dssp EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEE---ETTTTEEEECCCCC--
T ss_pred EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEE---eCCCCEEEEccccccc
Confidence 99999999999997654 37899999999999999999999 899999999999999 44444 8999999997
Q ss_pred ccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCCccCCCCCCCCC
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET--QQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
..... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.... .......+..+.. ......+
T Consensus 155 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 229 (307)
T 2eva_A 155 DIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR---PPLIKNL 229 (307)
T ss_dssp ------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC---CCCBTTC
T ss_pred ccccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC---CCccccc
Confidence 65432 234578999999999985 58999999999999999999999997543 3334444444332 2223568
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
++.+.+||.+||..||.+|||+.++++
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 999999999999999999999999987
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=369.83 Aligned_cols=251 Identities=24% Similarity=0.356 Sum_probs=214.1
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.+.|++.+.||+|+||.||+|.+.. +..||||++..... ..+.+.+|+.+|++|+ ||||+++++++.+ ..+||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEE
T ss_pred hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhCC-CCCEeeEEEEEee-ccceE
Confidence 4679999999999999999999864 46799999975432 2457889999999997 9999999999876 67899
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIED 415 (535)
T ss_dssp EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCTTSTTTCCC
T ss_pred eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---cCCCcEEEcccccceecCC
Confidence 99999999999999643 569999999999999999999999999999999999999 6778999999999987543
Q ss_pred CCc--eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQI--FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
... .....++..|+|||++. +.++.++|||||||++|||++ |..||.+....+++..+..+... .....+++.
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~~~~ 492 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---PCPPECPES 492 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHH
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHH
Confidence 221 12344677899999987 469999999999999999999 99999999988888888776432 223468999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcC--CCcCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLCH--PWICE 361 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~h--p~~~~ 361 (564)
+.+||.+||..||++|||+.+|++. .++..
T Consensus 493 l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 493 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 9999999999999999999999874 56654
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=355.21 Aligned_cols=245 Identities=20% Similarity=0.230 Sum_probs=195.4
Q ss_pred ccceeecccccccCCeEEEEE-----EEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcC--CCCccEEEEEEe
Q 008475 98 RDLYTLGRKLGQGQFGTTYLC-----TEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG--HKNIVTIKGAYE 170 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~--h~niv~~~~~~~ 170 (564)
.+.|.+.+.||+|+||.||+| .+..+++.||+|++... ....+..|+.+++.+.. |+||+.+++++.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 466999999999999999999 46788999999999643 23456677777777753 899999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeec--------CC
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQ-----RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN--------KD 237 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~--------~~ 237 (564)
.....|||||||++|+|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+|||+.. .+
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-----
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999999974 456999999999999999999999999999999999999943 11
Q ss_pred CCCcEEEeeCCCccccC---CCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 008475 238 DDFSLKAIDFGLSVFFK---PGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAV 313 (564)
Q Consensus 238 ~~~~~kl~DfG~~~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i 313 (564)
..+.+||+|||++.... ........+||+.|+|||++.+ .|+.++|||||||++|||++|+.||........
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~---- 293 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC---- 293 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce----
Confidence 27899999999996542 3445566789999999999985 489999999999999999999999965432110
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 314 LKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 314 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
........ ...++.+.+++..||+.+|.+|++..+.+.+
T Consensus 294 ---~~~~~~~~-~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~ 332 (365)
T 3e7e_A 294 ---KPEGLFRR-LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ 332 (365)
T ss_dssp ---EECSCCTT-CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred ---eechhccc-cCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence 00000111 1246789999999999999999765444443
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-42 Score=345.73 Aligned_cols=249 Identities=23% Similarity=0.345 Sum_probs=204.6
Q ss_pred cccceeecccccccCCeEEEEEE----EccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCT----EIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
..+.|++.+.||+|+||.||+|+ +..+++.||+|++... .....+.+.+|+.++++++ ||||+++++++...
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 114 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA 114 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCC-CTTBCCEEEEECC-
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEec
Confidence 34569999999999999999998 4568999999998653 3455678999999999997 99999999998764
Q ss_pred C--eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 173 L--CVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 173 ~--~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
. .+++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 115 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGL 191 (326)
T ss_dssp ---CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCTT
T ss_pred CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE---cCCCcEEEecCcc
Confidence 3 789999999999999999875 459999999999999999999999999999999999999 5677899999999
Q ss_pred ccccCCCCc----eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH----------------H
Q 008475 250 SVFFKPGQI----FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ----------------G 308 (564)
Q Consensus 250 ~~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~----------------~ 308 (564)
+........ .....++..|+|||++.+ .++.++|||||||++|+|++|..||...... .
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 987654332 123456778999999985 5899999999999999999999998543110 1
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+.+.+..+. .. +....+++++.+||.+||..||.+|||+.++++
T Consensus 272 ~~~~~~~~~-~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 272 LIELLKNNG-RL--PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHHHHTTC-CC--CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhhcCC-CC--CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 122222222 11 223568999999999999999999999999974
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-42 Score=346.49 Aligned_cols=250 Identities=21% Similarity=0.281 Sum_probs=195.4
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc-CCCCccEEEEEEecC-
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA-GHKNIVTIKGAYEDS- 172 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~niv~~~~~~~~~- 172 (564)
..+.++|++.+.||+|+||.||+|++. ++.||||++... .......|.+++..+. +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 345678999999999999999999964 889999998543 2234455666665541 499999999999877
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCEeecCCCCcEEeecCCCCCc
Q 008475 173 ---LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL--------GVMHRDLKPENFLLVNKDDDFS 241 (564)
Q Consensus 173 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~iiH~Dlkp~NIll~~~~~~~~ 241 (564)
..+++||||+++|+|.+++.. ..+++..+..++.|++.||.|||++ ||+||||||+|||+ +.++.
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill---~~~~~ 180 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KKNGT 180 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE---CTTSC
T ss_pred CCCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE---CCCCC
Confidence 789999999999999999865 4799999999999999999999999 99999999999999 77889
Q ss_pred EEEeeCCCccccCCCCc-----eecccCCCcccchhhhhhc-CCC------cchHHHHHHHHHHHHhC----------CC
Q 008475 242 LKAIDFGLSVFFKPGQI-----FTDVVGSPYYVAPEVLLKH-YGP------EADVWTAGVILYILLSG----------VP 299 (564)
Q Consensus 242 ~kl~DfG~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-~~~------~~DvwSlG~il~elltg----------~~ 299 (564)
+||+|||++........ .....||+.|+|||++.+. +.. ++|||||||++|||++| ..
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 99999999976543321 1245799999999999854 444 38999999999999999 77
Q ss_pred CCCCCC-----HHHHHHHHHcCCccCCCCC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 300 PFWAET-----QQGIFDAVLKGHIDFESDP---WPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 300 pf~~~~-----~~~~~~~i~~~~~~~~~~~---~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
||.... .......+.........+. ...+++++.+||.+||+.||.+|||+.++++|
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 775432 1222222222221111110 12356789999999999999999999999876
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-42 Score=348.48 Aligned_cols=248 Identities=23% Similarity=0.293 Sum_probs=202.5
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHh--hcCCCCccEEEEEEecCC
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH--LAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~~h~niv~~~~~~~~~~ 173 (564)
.+.++|++.+.||+|+||.||+|++ +++.||||++... ....+.+|+++++. ++ ||||+++++++....
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~-h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLR-HENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCC-CTTBCCEEEEEECCC
T ss_pred cccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcC-CCcEEEEEeeecccC
Confidence 3556799999999999999999997 5889999998543 34567789999987 55 999999999998876
Q ss_pred ----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCCEeecCCCCcEEeecCCCCCc
Q 008475 174 ----CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACH--------SLGVMHRDLKPENFLLVNKDDDFS 241 (564)
Q Consensus 174 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~iiH~Dlkp~NIll~~~~~~~~ 241 (564)
.+++||||+++|+|.+++.. ..+++..+..++.||+.||.||| ++||+||||||+|||+ +.++.
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll---~~~~~ 185 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGT 185 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE---CTTSC
T ss_pred CccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE---CCCCC
Confidence 89999999999999999865 46999999999999999999999 8999999999999999 77789
Q ss_pred EEEeeCCCccccCCCC-----ceecccCCCcccchhhhhhc-------CCCcchHHHHHHHHHHHHhC----------CC
Q 008475 242 LKAIDFGLSVFFKPGQ-----IFTDVVGSPYYVAPEVLLKH-------YGPEADVWTAGVILYILLSG----------VP 299 (564)
Q Consensus 242 ~kl~DfG~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-------~~~~~DvwSlG~il~elltg----------~~ 299 (564)
+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++| ..
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 9999999997765433 22446799999999999753 33689999999999999999 78
Q ss_pred CCCCCC-----HHHHHHHHHcCCccCCCCC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 300 PFWAET-----QQGIFDAVLKGHIDFESDP---WPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 300 pf~~~~-----~~~~~~~i~~~~~~~~~~~---~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
||.... ...+...+.........+. ...+++.+.+||.+||..||++|||+.+|++|
T Consensus 266 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 266 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred CccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 986642 2344444433332221110 01234678999999999999999999999875
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=370.48 Aligned_cols=250 Identities=25% Similarity=0.325 Sum_probs=210.9
Q ss_pred ccccceeecccccccCCeEEEEEEEccC---CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIAT---GIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
...++|++.+.||+|+||.||+|.+..+ +..||+|.+.... .....+.+.+|+.+++++. ||||+++++++.+
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~- 462 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFD-HPHIVKLIGVITE- 462 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECS-
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEec-
Confidence 3457799999999999999999998654 4579999886432 4556678999999999997 9999999999854
Q ss_pred CeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 173 LCVHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 173 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
...|+||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl---~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSR 539 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEE---eCCCCEEEEecCCCe
Confidence 56899999999999999997654 68999999999999999999999999999999999999 567899999999998
Q ss_pred ccCCCCc--eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 252 FFKPGQI--FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 252 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
....... .....+|+.|+|||++.+ .++.++|||||||++|||++ |..||.+....+....+..+.... ..+.
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~---~~~~ 616 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP---MPPN 616 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCC---CCTT
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC---CCcc
Confidence 7654332 223456789999999974 58999999999999999997 999999999888888887764322 2346
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+++.+.+||.+||..||.+|||+.++++
T Consensus 617 ~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 617 CPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8999999999999999999999999874
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=349.42 Aligned_cols=248 Identities=22% Similarity=0.314 Sum_probs=207.1
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||.||+|.+.. .||+|++..... .....+.+.+|+.++++++ ||||+++++++.+...+++
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-NEDQLKAFKREVMAYRQTR-HENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-CCCCCCCCCTTGGGGTTCC-CTTBCCCCEEEECSSCEEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-CHHHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCceEE
Confidence 4569999999999999999999753 599999875432 2333456778999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-
Q 008475 178 VMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP- 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~- 255 (564)
||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ + ++.+||+|||++.....
T Consensus 107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~---~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY---D-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp ECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEE---C---CCEECCCSCCC-----
T ss_pred EeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEE---e-CCCEEEeecCCccccccc
Confidence 999999999999987654 68999999999999999999999999999999999999 4 46899999999875431
Q ss_pred -----CCceecccCCCcccchhhhhh----------cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccC
Q 008475 256 -----GQIFTDVVGSPYYVAPEVLLK----------HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDF 320 (564)
Q Consensus 256 -----~~~~~~~~gt~~y~aPE~~~~----------~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~ 320 (564)
........|++.|+|||++.+ .++.++|||||||++|+|++|..||...........+..+....
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 262 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN 262 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCC
Confidence 122334568899999999863 36889999999999999999999999988888887777664432
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 321 ~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
. ....+++++.+||.+||..||.+|||+.++++.
T Consensus 263 ~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 296 (319)
T 2y4i_B 263 L--SQIGMGKEISDILLFCWAFEQEERPTFTKLMDM 296 (319)
T ss_dssp C--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred C--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 2 223578999999999999999999999999873
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-43 Score=353.23 Aligned_cols=255 Identities=23% Similarity=0.297 Sum_probs=190.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHH--HHhhcCCCCccEEEEEEec-----
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI--MHHLAGHKNIVTIKGAYED----- 171 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~--l~~l~~h~niv~~~~~~~~----- 171 (564)
++|++.+.||+|+||.||+|++ +++.||||++.... ...+..|.++ +..+. ||||+++++.+..
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~-h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLME-HDNIARFIVGDERVTADG 83 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECTTS
T ss_pred HHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhcc-CcchhhheecccccccCC
Confidence 5699999999999999999975 68899999986432 2334444444 44465 9999999986542
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---------CCEeecCCCCcEEeecCCCCCcE
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL---------GVMHRDLKPENFLLVNKDDDFSL 242 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---------~iiH~Dlkp~NIll~~~~~~~~~ 242 (564)
...+++|||||++|+|.+++... ..++..+..++.||+.||.|||+. ||+||||||+|||+ +.++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill---~~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV---KNDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE---CTTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE---cCCCcE
Confidence 34679999999999999988654 458999999999999999999999 99999999999999 777899
Q ss_pred EEeeCCCccccCCCC---------ceecccCCCcccchhhhhh--------cCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 008475 243 KAIDFGLSVFFKPGQ---------IFTDVVGSPYYVAPEVLLK--------HYGPEADVWTAGVILYILLSGVPPFWAET 305 (564)
Q Consensus 243 kl~DfG~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~--------~~~~~~DvwSlG~il~elltg~~pf~~~~ 305 (564)
||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999998654321 2234579999999999974 46778999999999999999977764322
Q ss_pred H------------------HHHHHHHHcCCccCC-CCC---CCCCCHHHHHHHHHhcccCCCCCCCHHHH------hcCC
Q 008475 306 Q------------------QGIFDAVLKGHIDFE-SDP---WPLISDSAKDLIRKMLCSQPSERLTAHEV------LCHP 357 (564)
Q Consensus 306 ~------------------~~~~~~i~~~~~~~~-~~~---~~~~s~~~~~li~~~l~~dp~~R~s~~~v------l~hp 357 (564)
. ......+........ ... ...+++.+.+||.+||..||++|||+.++ +.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 1 111111111111111 011 11244589999999999999999999999 4578
Q ss_pred CcCCCCCCC
Q 008475 358 WICENGVAP 366 (564)
Q Consensus 358 ~~~~~~~~~ 366 (564)
|-++....+
T Consensus 320 ~~~~~~~~~ 328 (336)
T 3g2f_A 320 WERNKSVSP 328 (336)
T ss_dssp CCC------
T ss_pred HHhcccCCC
Confidence 887765443
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-43 Score=362.96 Aligned_cols=247 Identities=17% Similarity=0.178 Sum_probs=195.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCC-CCcc--------------
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH-KNIV-------------- 163 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~niv-------------- 163 (564)
..|.+.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+. | +|..
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~-~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR-GIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGST-TCCSHHHHHHHTCBCCCCEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhc-cCCCHHHHHHhcccccchhh
Confidence 44888999999999999999999999999999987554444455678999999999987 5 3211
Q ss_pred -------EEEEEEec-----CCeEEEEEeccCCCchHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHCCCEee
Q 008475 164 -------TIKGAYED-----SLCVHIVMELCAGGELFDRIIQ-------RGHYSERKAAELTRIIVGVVEACHSLGVMHR 224 (564)
Q Consensus 164 -------~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~-------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~ 224 (564)
.++.++.. ...++++|+++ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 11111221 23477888877 7899888842 2347788899999999999999999999999
Q ss_pred cCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhh----------h-cCCCcchHHHHHHHHHH
Q 008475 225 DLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL----------K-HYGPEADVWTAGVILYI 293 (564)
Q Consensus 225 Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~-~~~~~~DvwSlG~il~e 293 (564)
||||+|||+ +.++.+||+|||+++.... .....+| +.|+|||++. + .++.++|||||||++|+
T Consensus 236 DiKp~NILl---~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 236 YLRPVDIVL---DQRGGVFLTGFEHLVRDGA--SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CCCGGGEEE---CTTCCEEECCGGGCEETTE--EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred CcccceEEE---ecCCeEEEEeccceeecCC--ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 999999999 7778899999999886443 2456678 9999999983 2 37889999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 294 LLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 294 lltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
|++|+.||...........+.. .+..+|+++.+||.+||..||++||++.++++||||..
T Consensus 310 lltg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 310 IWCADLPNTDDAALGGSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp HHHSSCCCCTTGGGSCSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHCCCCCCCcchhhhHHHHHh--------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 9999999987765443333322 23468899999999999999999999999999999954
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=357.13 Aligned_cols=251 Identities=19% Similarity=0.189 Sum_probs=197.7
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC-----CHHhHHHHHHHHHHHHhhc--------CCCCccE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI-----SREDVEDVRREIQIMHHLA--------GHKNIVT 164 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~--------~h~niv~ 164 (564)
.++|++.+.||+|+||+||+|++ +|+.||||++...... .....+.+.+|+.+++.++ +||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 35699999999999999999997 7899999999765421 2334577889999999986 5888888
Q ss_pred EEEEEe------------------------------cCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 008475 165 IKGAYE------------------------------DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214 (564)
Q Consensus 165 ~~~~~~------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~ 214 (564)
+.+++. ....+|||||||++|++.+.+.. +.+++..++.++.||+.||.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence 887753 26789999999999987776644 57899999999999999999
Q ss_pred HHH-HCCCEeecCCCCcEEeecCC-----------------CCCcEEEeeCCCccccCCCCceecccCCCcccchhhhhh
Q 008475 215 ACH-SLGVMHRDLKPENFLLVNKD-----------------DDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK 276 (564)
Q Consensus 215 ~lH-~~~iiH~Dlkp~NIll~~~~-----------------~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 276 (564)
||| ++||+||||||+|||+..++ ....+||+|||+|+..... ..+||+.|+|||++.+
T Consensus 176 ~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 176 VAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGCC
T ss_pred HHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhcC
Confidence 999 99999999999999995432 1128999999999876543 3479999999999998
Q ss_pred cCCCcchHHHHHHH-HHHHHhCCCCCCCCCH-HHHHHHHHcCCccCC---CCCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q 008475 277 HYGPEADVWTAGVI-LYILLSGVPPFWAETQ-QGIFDAVLKGHIDFE---SDPWPLISDSAKDLIRKMLCSQPSERLTAH 351 (564)
Q Consensus 277 ~~~~~~DvwSlG~i-l~elltg~~pf~~~~~-~~~~~~i~~~~~~~~---~~~~~~~s~~~~~li~~~l~~dp~~R~s~~ 351 (564)
..+.++||||+|++ .+++++|..||..... ....+.+........ ...++.+++++.+||.+||++| |+.
T Consensus 252 ~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~ 326 (336)
T 2vuw_A 252 DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SAT 326 (336)
T ss_dssp CSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHH
T ss_pred CCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHH
Confidence 77889999998777 7788999999844221 122333332211111 1112346889999999999977 999
Q ss_pred HHh-cCCCcC
Q 008475 352 EVL-CHPWIC 360 (564)
Q Consensus 352 ~vl-~hp~~~ 360 (564)
|+| +||||+
T Consensus 327 e~l~~Hp~f~ 336 (336)
T 2vuw_A 327 DLLCQHSLFK 336 (336)
T ss_dssp HHHHHCGGGC
T ss_pred HHHhcCCCcC
Confidence 999 999995
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=335.66 Aligned_cols=229 Identities=14% Similarity=0.064 Sum_probs=190.5
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
.+.++|++.+.||+|+||.||+|.+..+++.||||++...........+.+.+|+.++.++. ||||+++++++.+.+..
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~ 106 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID-KPGVARVLDVVHTRAGG 106 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCC-CCCcceeeEEEEECCcE
Confidence 35567999999999999999999999999999999998766555667788999999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|+||||++|++|.+++.. + .....+..++.||+.||.|||++||+||||||+|||+ +.++.+||+++|
T Consensus 107 ~lv~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll---~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 107 LVVAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV---SIDGDVVLAYPA------- 174 (286)
T ss_dssp EEEEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---ETTSCEEECSCC-------
T ss_pred EEEEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEE---cCCCCEEEEecc-------
Confidence 999999999999998854 3 4666789999999999999999999999999999999 667889988443
Q ss_pred CCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHcCCccCCCCCCCCCCHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFD---AVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~s~~~ 332 (564)
|++| ++.++|||||||++|+|++|+.||.+.+..+.+. ....+.........+.+++++
T Consensus 175 ------------~~~~------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (286)
T 3uqc_A 175 ------------TMPD------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI 236 (286)
T ss_dssp ------------CCTT------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHH
T ss_pred ------------ccCC------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHH
Confidence 3333 6889999999999999999999998765432110 111111111112235689999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+||.+||..||.+| |+.++++.
T Consensus 237 ~~li~~~l~~dP~~R-s~~el~~~ 259 (286)
T 3uqc_A 237 SAVAARSVQGDGGIR-SASTLLNL 259 (286)
T ss_dssp HHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred HHHHHHHcccCCccC-CHHHHHHH
Confidence 999999999999999 99998764
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=374.59 Aligned_cols=245 Identities=26% Similarity=0.311 Sum_probs=203.4
Q ss_pred ccccccceeecccccccCCeEEEEEEEcc-CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIA-TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS 172 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 172 (564)
.+.+.++|++.+.||+|+||.||+|.+.. +++.||||++.... .......+.+|+.++++++ ||||+++++++...
T Consensus 75 g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~ 151 (681)
T 2pzi_A 75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVV-HPSIVQIFNFVEHT 151 (681)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEEE
T ss_pred CCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcC-CCCcCeEeeeEeec
Confidence 34466789999999999999999999976 78999999986432 4556678899999999997 99999999999876
Q ss_pred Ce-----EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 173 LC-----VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 173 ~~-----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
.. .||||||++|++|.+.+.. .+++..+..|+.||+.||.|||++||+||||||+|||+ +. +.+||+||
T Consensus 152 ~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll---~~-~~~kl~DF 225 (681)
T 2pzi_A 152 DRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML---TE-EQLKLIDL 225 (681)
T ss_dssp CTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CS-SCEEECCC
T ss_pred CCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEE---eC-CcEEEEec
Confidence 55 7999999999999987754 79999999999999999999999999999999999999 44 37999999
Q ss_pred CCccccCCCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 248 GLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 248 G~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
|++...... ....||+.|+|||++.+.++.++|||||||++|+|++|.+||.+..... .. ...+...
T Consensus 226 G~a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~---------~~-~~~~~~~ 292 (681)
T 2pzi_A 226 GAVSRINSF---GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDG---------LP-EDDPVLK 292 (681)
T ss_dssp TTCEETTCC---SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSS---------CC-TTCHHHH
T ss_pred ccchhcccC---CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccccc---------cc-ccccccc
Confidence 999876543 4567999999999998888999999999999999999999986532110 00 0001112
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
+++.+.+||.+||..||.+||+..+++.|+|+.
T Consensus 293 ~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 293 TYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred cCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 467899999999999999999999988888764
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=311.98 Aligned_cols=232 Identities=16% Similarity=0.132 Sum_probs=160.0
Q ss_pred ccccccCCeEEEEEEEccCCcEEEEEEeccccCCC-------HHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS-------REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
..++.|++|.+..++....|+.||+|++.+..... ....+.+.+|+++|+++..|+||++++++++++..+||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 35788999999998988999999999997653221 23456799999999999889999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG- 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~- 256 (564)
|||||+|++|.++|...+++++. .|+.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 320 VMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL---~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV---DARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE---CTTSCEEECCCTTEESCC---
T ss_pred EEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE---CCCCCEEEeecccCeeCCCCC
Confidence 99999999999999998888875 478999999999999999999999999999 77889999999999876433
Q ss_pred CceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
....+.+||+.|+|||++.+.+..++|+||+|+++++|.++..|+ ...+... +.. ...+..+.
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~--------~~~l~~~----~~~-----~~~~~~l~ 456 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNW--------LYAVWQE----PVE-----RWNFVLLL 456 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHHH--------HHHHHTS----CGG-----GCSHHHHH
T ss_pred ccccCceechhhccHHHhCCCCCCcccccccccchhhhccccchh--------HHHhhcC----CCC-----CCcHHHHH
Confidence 344567899999999999999999999999999999887765443 1111110 000 01234556
Q ss_pred HHhcccCCCCCCCHHHHhcCCCc
Q 008475 337 RKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
..++..+|..||.......|+|.
T Consensus 457 ~~l~~~~~~~~~~~~~~~~~~~~ 479 (569)
T 4azs_A 457 ALFEKKAKLPSAEQQRGATEQWI 479 (569)
T ss_dssp HHHHTGGGSCCGGGSSCCHHHHH
T ss_pred HHHhCCCCCCCCChhhhccchhH
Confidence 66666677777666555555554
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-28 Score=261.87 Aligned_cols=185 Identities=19% Similarity=0.153 Sum_probs=145.5
Q ss_pred eecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHH-----hHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 102 TLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE-----DVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 102 ~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
...++||+|+||.||+|. ..+..+|+|+.......... ..+++.+|++++++++ ||||+++..++......|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVK-DFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGG-GGTCCCCCEEEEETTTTE
T ss_pred CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcC-CCCcCceEEEEEeCCccE
Confidence 345689999999999995 56789999987654433222 2456899999999997 999995555555666779
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||||+|++|.+++.. +..++.||+.||.|||++||+||||||+|||+ +. .+||+|||+++.....
T Consensus 416 lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl---~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF---DK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEE---SS--SEEECCCTTCEECCCH
T ss_pred EEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEE---CC--eEEEEECccCEECCCc
Confidence 99999999999998865 67899999999999999999999999999999 54 8999999999987553
Q ss_pred Cc--------eecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCC
Q 008475 257 QI--------FTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFW 302 (564)
Q Consensus 257 ~~--------~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~ 302 (564)
.. ....+||+.|+|||++.. .|+..+|+||..+-..+.+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 21 235789999999999974 48888999999998888888877763
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=215.22 Aligned_cols=185 Identities=34% Similarity=0.567 Sum_probs=151.1
Q ss_pred cCCCcCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHhhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhh
Q 008475 355 CHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY 434 (564)
Q Consensus 355 ~hp~~~~~~~~~~~~~~~~~~~~~k~~~~~n~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 434 (564)
.|||.+.... ...++...++.++++|...+.+++..+..+...++++++..++++|..+|.|++|.|+.+||..++..+
T Consensus 8 ~~~~~~~~~~-~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 86 (197)
T 3pm8_A 8 SSGRENLYFQ-GHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI 86 (197)
T ss_dssp ---------C-CSCCCCTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred cchHhhhccC-CCCCCCHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh
Confidence 4899987653 456788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC--C--CCH
Q 008475 435 GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--N--MTD 510 (564)
Q Consensus 435 ~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~--~--~~~ 510 (564)
+..++..++..+|..+|.+++|.|+|+||+.++........++.+..+|+.+|.|++|+|+.+||+.++... | +++
T Consensus 87 g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~ 166 (197)
T 3pm8_A 87 GYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLID 166 (197)
T ss_dssp C----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCH
Confidence 999999999999999999999999999999887766555667889999999999999999999999999876 3 678
Q ss_pred HHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 511 VLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 511 ~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
++++++|..+|.|+||.|+|+||+.+|.+.
T Consensus 167 ~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 196 (197)
T 3pm8_A 167 KAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 196 (197)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCCCCcCcHHHHHHHHHcC
Confidence 899999999999999999999999998753
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=203.29 Aligned_cols=181 Identities=34% Similarity=0.516 Sum_probs=154.2
Q ss_pred cCCCcCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHhhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhh
Q 008475 355 CHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY 434 (564)
Q Consensus 355 ~hp~~~~~~~~~~~~~~~~~~~~~k~~~~~n~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 434 (564)
.|||+.... .....+...++.++++|...+.+++..+..+...++++++..++++|..+|.|++|.|+.+||..+++.+
T Consensus 3 ~~~~~~~~~-~~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~ 81 (191)
T 3k21_A 3 HHHHHSSGR-ENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKD 81 (191)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT
T ss_pred CCccccCCc-cccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHc
Confidence 577776533 3345677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC--C--CCH
Q 008475 435 GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--N--MTD 510 (564)
Q Consensus 435 ~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~--~--~~~ 510 (564)
+..++ .++..+|..+|.+++|.|+|+||+..+..... ...+.+..+|+.+|.|++|.|+.+||+.++... + +++
T Consensus 82 g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~-~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~ 159 (191)
T 3k21_A 82 GLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQ-LSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQ 159 (191)
T ss_dssp TCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGG-CCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCH
T ss_pred CCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhh-ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCH
Confidence 98888 89999999999999999999999998755432 446778999999999999999999999999873 3 555
Q ss_pred ---HHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 511 ---VLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 511 ---~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
+++.++|..+|.|+||.|+|+||+.+|.
T Consensus 160 ~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 160 RDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp HHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred hHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 4689999999999999999999999874
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-25 Score=219.14 Aligned_cols=159 Identities=21% Similarity=0.255 Sum_probs=124.7
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCH---------------HhHHHHHHHHHHHHhhcCCCCccE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISR---------------EDVEDVRREIQIMHHLAGHKNIVT 164 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~E~~~l~~l~~h~niv~ 164 (564)
.|.+++.||+|+||.||+|.+ .+|+.||+|++........ .....+.+|+.+++++. |++++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~~~v~~ 168 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPK 168 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCC
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-CCCcCe
Confidence 356679999999999999999 8899999999964321111 23567889999999997 555555
Q ss_pred EEEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEE
Q 008475 165 IKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKA 244 (564)
Q Consensus 165 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl 244 (564)
++ .. ...|+|||||+|++|.+ +. ......++.||+.||.|||++||+||||||+|||+ + ++.+||
T Consensus 169 ~~---~~-~~~~lvmE~~~g~~L~~-l~------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl---~-~~~vkl 233 (282)
T 1zar_A 169 VY---AW-EGNAVLMELIDAKELYR-VR------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV---S-EEGIWI 233 (282)
T ss_dssp EE---EE-ETTEEEEECCCCEEGGG-CC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---E-TTEEEE
T ss_pred EE---ec-cceEEEEEecCCCcHHH-cc------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEE---E-CCcEEE
Confidence 44 33 45699999999999987 41 13455799999999999999999999999999999 5 789999
Q ss_pred eeCCCccccCCCCceecccCCCcccchhhhh-----------hcCCCcchHHHH
Q 008475 245 IDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-----------KHYGPEADVWTA 287 (564)
Q Consensus 245 ~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~-----------~~~~~~~DvwSl 287 (564)
+|||++.. +..|+|||++. ..|+..+|+|.+
T Consensus 234 ~DFG~a~~------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~ 275 (282)
T 1zar_A 234 IDFPQSVE------------VGEEGWREILERDVRNIITYFSRTYRTEKDINSA 275 (282)
T ss_dssp CCCTTCEE------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred EECCCCeE------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence 99999874 34578999885 246677777754
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=195.40 Aligned_cols=156 Identities=37% Similarity=0.635 Sum_probs=138.2
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch-hhH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK-LER 475 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~-~~~ 475 (564)
.+||++++..++++|..+|+|++|.|+.+||..+++.+|.+++..++..++..+|.+++|.|+|.||+..+..... ...
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~ 82 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 82 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence 4689999999999999999999999999999999999999999999999999999999999999999988765433 345
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCC-ChHHHHHH
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGL-GRRTMRNS 552 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~-~~~~~~~~ 552 (564)
++.+..+|+.||.|++|+|+.+||+.+|..+| ++++++++++..+| |+||.|+|+||+++|.+..... ..+.+++.
T Consensus 83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~~~~~~~~~~~r~~ 161 (176)
T 2lhi_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGSSTGTRRKALRNK 161 (176)
T ss_dssp HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTCCSSCSSSHHHHTHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHhcCCccchHHHHHHH
Confidence 77899999999999999999999999999887 89999999999999 9999999999999998764332 33444443
Q ss_pred H
Q 008475 553 L 553 (564)
Q Consensus 553 f 553 (564)
+
T Consensus 162 ~ 162 (176)
T 2lhi_A 162 I 162 (176)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=199.30 Aligned_cols=171 Identities=18% Similarity=0.203 Sum_probs=151.3
Q ss_pred HhhhhhhHHHHHHHHHhhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCcc
Q 008475 379 KQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458 (564)
Q Consensus 379 k~~~~~n~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I 458 (564)
..+.....+++.-+..+...++++++.+++++|..+|.|++|.|+.+||..+++.++..++..+++.+|..+|.+++|.|
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I 104 (220)
T 3sjs_A 25 CIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHI 104 (220)
T ss_dssp HHHHSCHHHHTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCB
T ss_pred hccCCChhHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcC
Confidence 34444444554444555678999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHH
Q 008475 459 DYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAM 536 (564)
Q Consensus 459 ~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~ 536 (564)
+|+||+.++... ..+..+|+.+|.|++|.|+.+||+.++..+| +++++++.++..+| |+||.|+|+||+++
T Consensus 105 ~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~ 177 (220)
T 3sjs_A 105 SFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAI 177 (220)
T ss_dssp CHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHH
T ss_pred CHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHH
Confidence 999999987653 5588999999999999999999999999876 89999999999999 99999999999999
Q ss_pred HHcCCCCCChHHHHHHHhHH-ccCCCC
Q 008475 537 MQKGNVGLGRRTMRNSLNMS-MRDAPG 562 (564)
Q Consensus 537 ~~~~~~~~~~~~~~~~f~~~-D~~~~g 562 (564)
+... ..++++|+.+ |.+++|
T Consensus 178 ~~~l------~~~~~~F~~~~D~~~~G 198 (220)
T 3sjs_A 178 CAFA------AQTRSAYQMIFMNPYYG 198 (220)
T ss_dssp HHHH------HHHHHHHHHHHTSGGGC
T ss_pred HHHH------HHHHHHHHHhcccCCCC
Confidence 9876 5789999999 999999
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.4e-24 Score=188.20 Aligned_cols=142 Identities=35% Similarity=0.623 Sum_probs=131.9
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh-chhhHH
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL-NKLERE 476 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-~~~~~~ 476 (564)
.||++++..++++|..+|+|++|.|+.+||..+++.++.++...++..++..+|.+++|.|+|.||+..+... .....+
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 82 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE 82 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcH
Confidence 5789999999999999999999999999999999999999999999999999999999999999999877543 334557
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
+.++.+|+.+|.|++|+|+.+||+.++..+| +++++++++|..+|.|+||.|+|+||+++|.+
T Consensus 83 ~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp HHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 7899999999999999999999999999877 89999999999999999999999999999864
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-23 Score=182.70 Aligned_cols=139 Identities=30% Similarity=0.608 Sum_probs=127.0
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhhHHHH
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLEREEH 478 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~~~~~ 478 (564)
+++++..++++|..+|.|++|.|+.+||..+++.+|.+++..++..++..+|.+++|.|+|+||+.++.... .......
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 80 (143)
T 2obh_A 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE 80 (143)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHH
Confidence 356788899999999999999999999999999999999999999999999999999999999998875432 2334577
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 479 LVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 479 l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
+..+|+.+|.|++|+|+.+||+.++..+| ++++++.++|..+|.|+||.|+|+||+.+|.
T Consensus 81 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 81 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 89999999999999999999999999887 8899999999999999999999999999874
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-23 Score=188.03 Aligned_cols=167 Identities=24% Similarity=0.490 Sum_probs=150.2
Q ss_pred CCHHHHHHHHhhhhhhHHHHHHHHHhhhhhh--HHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHH
Q 008475 370 LDPAVLSRLKQFSAMNKLKKMALRVIAESLS--EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLM 447 (564)
Q Consensus 370 ~~~~~~~~~k~~~~~n~~~~~~~~~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~ 447 (564)
+.+.++.++++|...+.+++..+..+...++ ++++..++++|..+|.|++|.|+.+||..++..++.. ..++..+|
T Consensus 2 ~~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~ 79 (180)
T 3mse_B 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRIL 79 (180)
T ss_dssp CCHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHH
Confidence 4578899999999999999999999998887 8999999999999999999999999999999998864 68899999
Q ss_pred HhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCC--
Q 008475 448 DAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDND-- 525 (564)
Q Consensus 448 ~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~d-- 525 (564)
..+|.+++|.|+|+||+..+...... ..+.+..+|+.+|.|++|+|+.+||+.++...++++++++++|..+|.|+|
T Consensus 80 ~~~D~d~~g~i~~~Ef~~~~~~~~~~-~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~d~~~d~~ 158 (180)
T 3mse_B 80 QALDINDRGNITYTEFMAGCYRWKNI-ESTFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGI 158 (180)
T ss_dssp HHHCTTCCSEECHHHHHHHHSCCTTC---CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHHHHHTC----
T ss_pred HHhCCCCCCcCcHHHHHHHHHhcccC-CHHHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHHHhhhccCcc
Confidence 99999999999999999988755432 246789999999999999999999999999777999999999999999988
Q ss_pred ------cceeHHHHHHHHHc
Q 008475 526 ------GRIDYGEFVAMMQK 539 (564)
Q Consensus 526 ------g~I~~~eF~~~~~~ 539 (564)
|.|+|+||+.+|..
T Consensus 159 ~~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 159 PREHIINKISFQEFKDYMLS 178 (180)
T ss_dssp -----CCCBCHHHHHHHHHT
T ss_pred cccccCCeeeHHHHHHHHHh
Confidence 99999999999864
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-23 Score=185.73 Aligned_cols=142 Identities=20% Similarity=0.364 Sum_probs=127.5
Q ss_pred hhhHHHHHhHhhhhhcccC--CCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch---
Q 008475 398 SLSEEEIAGLKEMFKAMDT--DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK--- 472 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~--d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~--- 472 (564)
++|++++..++++|..||. |++|.|+..||..+|+.+|.+++..++..++. .|.+++|.|+|+||+.++.....
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~ 80 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT 80 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc
Confidence 5789999999999999996 89999999999999999999999999998765 47788999999999998765432
Q ss_pred hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCC--CCCcceeHHHHHHHHHcC
Q 008475 473 LEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQ--DNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 473 ~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~--d~dg~I~~~eF~~~~~~~ 540 (564)
....+.+..+|+.+|+|++|+|+.+||+++|..+| ++++++++++..+|. |+||.|+|+||+++|...
T Consensus 81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~ 152 (159)
T 3i5g_C 81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCC
Confidence 23467799999999999999999999999999988 899999999999995 889999999999988765
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-23 Score=206.69 Aligned_cols=143 Identities=39% Similarity=0.703 Sum_probs=130.7
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh-chhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL-NKLE 474 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-~~~~ 474 (564)
.+.++++++..|+++|+.+|.|++|.|+.+||..+|+.++..+++.+++.+|..+|.|++|.|+|+||+.++... ....
T Consensus 293 ~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d 372 (440)
T 3u0k_A 293 RDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTD 372 (440)
T ss_dssp CBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----
T ss_pred HhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence 357899999999999999999999999999999999999999999999999999999999999999999887653 3334
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
.++.++.+|+.+|.|++|+|+.+||+.+|..+| +++++++++|+.+|.|+||.|+|+||+++|.
T Consensus 373 ~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 438 (440)
T ss_dssp -CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence 567899999999999999999999999999877 8999999999999999999999999999885
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-23 Score=187.11 Aligned_cols=162 Identities=78% Similarity=1.162 Sum_probs=138.1
Q ss_pred HhhhhhhHHHHHHHHHhhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCcc
Q 008475 379 KQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458 (564)
Q Consensus 379 k~~~~~n~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I 458 (564)
++|...+.+++..+..+...++++++..++++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.+++|.|
T Consensus 1 ~~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i 80 (166)
T 2aao_A 1 KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTI 80 (166)
T ss_dssp -----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSB
T ss_pred CchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeE
Confidence 35777888899988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 459 DYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 459 ~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
+|+||+..+...........+..+|+.+|.|++|.|+.+||+.++..+|+++++++++|..+|.|+||.|+|+||+.++.
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 160 (166)
T 2aao_A 81 DYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQ 160 (166)
T ss_dssp CHHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC--------CCHHHHHCTTCSSSBCHHHHHHHHC
T ss_pred cHHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 99999998876554455677899999999999999999999999998899999999999999999999999999999987
Q ss_pred cC
Q 008475 539 KG 540 (564)
Q Consensus 539 ~~ 540 (564)
..
T Consensus 161 ~~ 162 (166)
T 2aao_A 161 KG 162 (166)
T ss_dssp --
T ss_pred hc
Confidence 54
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-23 Score=193.79 Aligned_cols=172 Identities=33% Similarity=0.570 Sum_probs=156.7
Q ss_pred CCCHHHHHHHHhhhhhhHHHHHHHHHhhhhh-hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhh-----------CC
Q 008475 369 SLDPAVLSRLKQFSAMNKLKKMALRVIAESL-SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY-----------GS 436 (564)
Q Consensus 369 ~~~~~~~~~~k~~~~~n~~~~~~~~~~~~~~-~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-----------~~ 436 (564)
++...++.++++|...+.+++..+..+...+ +++++..++++|..+|.|++|.|+.+||..++..+ +.
T Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~ 82 (191)
T 3khe_A 3 HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDS 82 (191)
T ss_dssp CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccc
Confidence 3457789999999999999999999998888 88999999999999999999999999999999987 66
Q ss_pred CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHH
Q 008475 437 TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDI 516 (564)
Q Consensus 437 ~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~ 516 (564)
.+...++..+|..+|.+++|.|+|+||+.++.........+.+..+|+.+|.|++|.|+.+||..++....+++++++.+
T Consensus 83 ~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~ 162 (191)
T 3khe_A 83 SQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQV 162 (191)
T ss_dssp HHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCHHHHHHH
T ss_pred hhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCHHHHHHH
Confidence 66788899999999999999999999999887665555677899999999999999999999999998556899999999
Q ss_pred HHHhCCCCCcceeHHHHHHHHHcC
Q 008475 517 IREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 517 ~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
|..+|.|+||.|+|+||+.++...
T Consensus 163 ~~~~D~~~dg~i~~~eF~~~~~~~ 186 (191)
T 3khe_A 163 LQECDKNNDGEVDFEEFVEMMQKI 186 (191)
T ss_dssp HHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999998754
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7.5e-23 Score=185.65 Aligned_cols=149 Identities=23% Similarity=0.384 Sum_probs=137.1
Q ss_pred HHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhC-CCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHH
Q 008475 403 EIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVA 481 (564)
Q Consensus 403 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~-~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~ 481 (564)
+..+++++|..+|.|++|.|+.+||..+++.++ .+++..++..+|..+|.+++|.|+|+||+..+.. ...+..
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~------~~~~~~ 78 (172)
T 2znd_A 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY------ITDWQN 78 (172)
T ss_dssp -CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHH------HHHHHH
T ss_pred chhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH------HHHHHH
Confidence 345789999999999999999999999999888 7889999999999999999999999999987653 356889
Q ss_pred HHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccC
Q 008475 482 AFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRD 559 (564)
Q Consensus 482 ~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~ 559 (564)
+|+.+|.|++|.|+.+||..++..+| ++++++..+|..+|.|+||.|+|+||+.++... +.+.++|+.+|.|
T Consensus 79 ~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d 152 (172)
T 2znd_A 79 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL------QRLTDIFRRYDTD 152 (172)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH------HHHHHHHHHHCTT
T ss_pred HHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCC
Confidence 99999999999999999999999887 789999999999999999999999999999765 7889999999999
Q ss_pred CCCC
Q 008475 560 APGS 563 (564)
Q Consensus 560 ~~g~ 563 (564)
+||+
T Consensus 153 ~dG~ 156 (172)
T 2znd_A 153 QDGW 156 (172)
T ss_dssp SSSC
T ss_pred CCCe
Confidence 9995
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=188.07 Aligned_cols=147 Identities=25% Similarity=0.422 Sum_probs=136.8
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHH
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQ 484 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~ 484 (564)
.+++++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+..+.. ...++.+|+
T Consensus 27 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~------~~~~~~~F~ 100 (191)
T 1y1x_A 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMREGFR 100 (191)
T ss_dssp SCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH------HHHHHHHHH
Confidence 56899999999999999999999999987888899999999999999999999999999987753 256889999
Q ss_pred HhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCC
Q 008475 485 YFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPG 562 (564)
Q Consensus 485 ~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g 562 (564)
.+|.|++|.|+.+||+.++..+| +++++++.+|..+|.|+||.|+|+||+.++... ..+.++|+.+|.|++|
T Consensus 101 ~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~dG 174 (191)
T 1y1x_A 101 KRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV------CRVRNVFAFYDRERTG 174 (191)
T ss_dssp HHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCS
T ss_pred HhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH------HHHHHHHHHhCcCCCc
Confidence 99999999999999999999887 899999999999999999999999999999765 7889999999999999
Q ss_pred C
Q 008475 563 S 563 (564)
Q Consensus 563 ~ 563 (564)
+
T Consensus 175 ~ 175 (191)
T 1y1x_A 175 Q 175 (191)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=177.96 Aligned_cols=142 Identities=39% Similarity=0.688 Sum_probs=130.4
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhhHH
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLERE 476 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~~~ 476 (564)
.++++++..++++|..+|.|++|.|+.+||..+++.++..++..++..+|..+|.+++|.|+|+||+.++.... .....
T Consensus 3 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 82 (148)
T 1exr_A 3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 82 (148)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcH
Confidence 56788899999999999999999999999999999999999999999999999999999999999998876532 33456
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
..+..+|+.+|+|++|.|+.+||+.++..+| ++++++.++|..+|.|+||.|+|+||+.+|..
T Consensus 83 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 7788999999999999999999999999887 89999999999999999999999999998853
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.5e-23 Score=185.19 Aligned_cols=147 Identities=22% Similarity=0.364 Sum_probs=135.5
Q ss_pred HHHhHhhhhhcccCCCCCCCCHHHHHHHHHhh-C-------CCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhh
Q 008475 403 EIAGLKEMFKAMDTDNSGAITFDELKAGLRRY-G-------STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLE 474 (564)
Q Consensus 403 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-~-------~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~ 474 (564)
++.+++++|..+| |++|.|+.+||..+++.+ | ..++..++..+|..+|.+++|.|+|+||...+..
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~----- 75 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN----- 75 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-----
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH-----
Confidence 5678999999999 999999999999999987 6 6788999999999999999999999999988763
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHH
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNS 552 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~ 552 (564)
...+..+|+.+|.|++|.|+.+||..++..+| +++++++.++..+| |+||.|+|+||+.++... ..+.++
T Consensus 76 -~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~------~~~~~~ 147 (173)
T 1alv_A 76 -IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL------DAMFRA 147 (173)
T ss_dssp -HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH------HHHHHH
T ss_pred -HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH------HHHHHH
Confidence 35688999999999999999999999998877 78999999999999 999999999999999765 789999
Q ss_pred HhHHccCCCCC
Q 008475 553 LNMSMRDAPGS 563 (564)
Q Consensus 553 f~~~D~~~~g~ 563 (564)
|+.+|+||+|+
T Consensus 148 F~~~D~d~~G~ 158 (173)
T 1alv_A 148 FKSLDKDGTGQ 158 (173)
T ss_dssp HHHHSSSCCSE
T ss_pred HHHhCCCCCCe
Confidence 99999999995
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.88 E-value=8.6e-24 Score=211.09 Aligned_cols=219 Identities=21% Similarity=0.351 Sum_probs=167.1
Q ss_pred CCHHHHHHHHHhc---ccCCCCCCCHHHHhcC------CCcCCCCCCC----------------CCCCCH-------HHH
Q 008475 328 ISDSAKDLIRKML---CSQPSERLTAHEVLCH------PWICENGVAP----------------DRSLDP-------AVL 375 (564)
Q Consensus 328 ~s~~~~~li~~~l---~~dp~~R~s~~~vl~h------p~~~~~~~~~----------------~~~~~~-------~~~ 375 (564)
+++++.+|.++++ ..+|.+|.+.++.+.| +|+.....+. ...... .++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~g~~~~e~q~~~~vl 96 (323)
T 1ij5_A 17 VHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLL 96 (323)
T ss_dssp HHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhHHHHHHHHhhcCCCCCcchhhHHHH
Confidence 4678889999998 8899999999999999 9988652211 011111 122
Q ss_pred HHHH-hhhhhhHHHHHHHHHhhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCC
Q 008475 376 SRLK-QFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDN 454 (564)
Q Consensus 376 ~~~k-~~~~~n~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~ 454 (564)
.+++ +|...+.+.+ +...++++++..+..+|..+|.|++|.|+.+||..+|..+|..++..++..+|..+|.++
T Consensus 97 ~~l~~~f~~~~~lkk-----~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~ 171 (323)
T 1ij5_A 97 KDLEDDASGYNRLRP-----SKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDT 171 (323)
T ss_dssp HHC------------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhHHH-----HHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCC
Confidence 2232 3333333333 346789999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHH-HHHHhCCCCCcceeHHHH
Q 008475 455 SGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLED-IIREVDQDNDGRIDYGEF 533 (564)
Q Consensus 455 ~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~-~~~~~d~d~dg~I~~~eF 533 (564)
+|.|+|.+|..++ .....+..+|..+|.|++|.|+.+||..++....++..++.. +|..+|.|+||.|+|+||
T Consensus 172 ~G~I~f~ef~~l~------~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF 245 (323)
T 1ij5_A 172 KGRMSYITLVAVA------NDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEY 245 (323)
T ss_dssp SSTHHHHHHTTSH------HHHHTSCCCHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred CCcCcHHHHHhhh------hHHHHHHHHHHHHCCCCCCcCcHHHHHHHHcCCCCCHHHHHHHHHHHhcCCCCCEEeHHHH
Confidence 9999999997654 234557788999999999999999999998334478888999 999999999999999999
Q ss_pred HHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 534 VAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+.++.... .+..+|+.+|.||+|+
T Consensus 246 ~~~l~~~~------~l~~~F~~~D~d~dG~ 269 (323)
T 1ij5_A 246 VHLGLCLL------VLRILYAFADFDKSGQ 269 (323)
T ss_dssp HHHHHHHH------HHHHHHHHTCSSSCSS
T ss_pred HHHHHHHH------HHHHHHHHhCCCCCCC
Confidence 99887652 6788889999988885
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-22 Score=177.60 Aligned_cols=139 Identities=23% Similarity=0.449 Sum_probs=125.7
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhhH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLER 475 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~~ 475 (564)
..++++++..++++|+.+|+|++|.|+.+||..+++.+|..++..++..++.. ++|.|+|.+|+..+.... ....
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~----~~~~i~f~ef~~~~~~~~~~~~~ 83 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKE----CPGQLNFTAFLTLFGEKVSGTDP 83 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHT----SSSCCCSHHHHHTTTTTTTTCCC
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHh----ccCCccHHHHHHHHHhhhccccc
Confidence 36899999999999999999999999999999999999999999998887764 567899999998876543 3345
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
++.++.+|+.+|.|++|+|+.+||+.+|..+| ++++++++++..+|.+ ||.|+|+||+++|.+.
T Consensus 84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~ 149 (153)
T 3i5g_B 84 EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKA 149 (153)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCS
T ss_pred HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCC
Confidence 77899999999999999999999999999988 8999999999999988 9999999999999865
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=172.48 Aligned_cols=142 Identities=36% Similarity=0.629 Sum_probs=130.0
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLE 474 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~ 474 (564)
...++++++.+++++|..+|.+++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+..+.... ...
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 81 (147)
T 4ds7_A 2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCND 81 (147)
T ss_dssp --CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHH
T ss_pred CCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCC
Confidence 4578899999999999999999999999999999999999999999999999999999999999999999876543 234
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
....+..+|+.+|.|++|.|+.+||+.++..+| ++++++..+|..+| |+||.|+|+||+.++.
T Consensus 82 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred cHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 567889999999999999999999999999887 89999999999999 9999999999999875
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=174.71 Aligned_cols=144 Identities=31% Similarity=0.505 Sum_probs=133.0
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh-chhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL-NKLE 474 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-~~~~ 474 (564)
...++++++.+++++|..+|.+++|.|+.+||..+++.++..++..++..+|..+|.+++|.|+|+||+..+... ....
T Consensus 14 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 93 (161)
T 3fwb_A 14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRD 93 (161)
T ss_dssp TTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCC
Confidence 457899999999999999999999999999999999999999999999999999999999999999999887643 3334
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
....+..+|+.+|.|++|.|+.+||+.++..+| +++++++.+|..+|.|++|.|+|+||+.++.+
T Consensus 94 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 94 PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 567889999999999999999999999999887 89999999999999999999999999999864
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=176.48 Aligned_cols=144 Identities=36% Similarity=0.610 Sum_probs=131.7
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhhH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLER 475 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~~ 475 (564)
..++++++..++++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+..+.... ....
T Consensus 20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 99 (169)
T 3qrx_A 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDS 99 (169)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCc
Confidence 468889999999999999999999999999999999999999999999999999999999999999999876533 2334
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...+..+|+.+|.|++|.|+.+||+.++..+| +++++++.+|..+|.|+||.|+|+||+.++.+.
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 166 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT 166 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC--
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhc
Confidence 67788999999999999999999999999887 899999999999999999999999999998754
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-21 Score=175.23 Aligned_cols=141 Identities=25% Similarity=0.337 Sum_probs=129.9
Q ss_pred hhhhcccCCCCCCCCHHHHHHHHHhhCC-----CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHH
Q 008475 409 EMFKAMDTDNSGAITFDELKAGLRRYGS-----TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAF 483 (564)
Q Consensus 409 ~~F~~~D~d~~G~I~~~el~~~l~~~~~-----~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F 483 (564)
+.|..+|.|++|.|+.+||..++..++. .++..++..+|..+|.+++|.|+|+||+.++... ..+..+|
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F 78 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHF 78 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence 4588999999999999999999999886 6789999999999999999999999999887543 5688999
Q ss_pred HHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCC
Q 008475 484 QYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAP 561 (564)
Q Consensus 484 ~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~ 561 (564)
+.+|.|++|.|+.+||+.++..+| +++++++.++..+ |+||.|+|+||+.++... ..+.++|+.+|+|++
T Consensus 79 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~ 150 (167)
T 1gjy_A 79 ISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL------RALTDSFRRRDSAQQ 150 (167)
T ss_dssp HHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH------HHHHHHHHHHCTTCC
T ss_pred HHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCC
Confidence 999999999999999999999887 7899999999999 899999999999999765 788999999999999
Q ss_pred CC
Q 008475 562 GS 563 (564)
Q Consensus 562 g~ 563 (564)
|+
T Consensus 151 G~ 152 (167)
T 1gjy_A 151 GM 152 (167)
T ss_dssp SE
T ss_pred ee
Confidence 95
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=179.08 Aligned_cols=160 Identities=37% Similarity=0.651 Sum_probs=133.6
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhhH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLER 475 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~~ 475 (564)
..++++++..++++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+..+.... ....
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~ 82 (179)
T 2f2o_A 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82 (179)
T ss_dssp ---CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCccc
Confidence 467888999999999999999999999999999999999999999999999999999999999999998876543 2345
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCC----ChHHH
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGL----GRRTM 549 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~----~~~~~ 549 (564)
...+..+|+.+|.|++|.|+.+||+.++..+| ++++++..+|..+|.|+||.|+|+||+.++...+... ....+
T Consensus 83 ~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~ 162 (179)
T 2f2o_A 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEVI 162 (179)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-------------C
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCchHHHHHHHH
Confidence 67789999999999999999999999999887 8899999999999999999999999999998764332 22334
Q ss_pred HHHHhHH
Q 008475 550 RNSLNMS 556 (564)
Q Consensus 550 ~~~f~~~ 556 (564)
.++|+.+
T Consensus 163 ~~~~~~~ 169 (179)
T 2f2o_A 163 RNKIRAI 169 (179)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4555544
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.6e-22 Score=184.32 Aligned_cols=150 Identities=24% Similarity=0.340 Sum_probs=137.3
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCC-----CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGS-----TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL 473 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-----~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~ 473 (564)
.++.+++++++ |..+|.|++|.|+.+||..+++.++. .++..+++.+|..+|.+++|.|+|+||+..+...
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~--- 102 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL--- 102 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH---
Confidence 45567788999 99999999999999999999999886 6789999999999999999999999999887642
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHH
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRN 551 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~ 551 (564)
..++.+|+.+|.|++|.|+.+||+.++..+| ++++++++++..+ |+||.|+|+||+.++... ..+.+
T Consensus 103 ---~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~------~~~~~ 171 (198)
T 1juo_A 103 ---NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL------RALTD 171 (198)
T ss_dssp ---HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH------HHHHH
T ss_pred ---HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH------HHHHH
Confidence 5688999999999999999999999999887 7899999999999 899999999999999765 68899
Q ss_pred HHhHHccCCCCC
Q 008475 552 SLNMSMRDAPGS 563 (564)
Q Consensus 552 ~f~~~D~~~~g~ 563 (564)
+|+.+|+|++|+
T Consensus 172 ~F~~~D~d~~G~ 183 (198)
T 1juo_A 172 SFRRRDTAQQGV 183 (198)
T ss_dssp HHHHTCTTCCSE
T ss_pred HHHHhCCCCCCe
Confidence 999999999995
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=175.32 Aligned_cols=146 Identities=34% Similarity=0.578 Sum_probs=132.1
Q ss_pred hhhhhhHHHHHhHhhhhhcccCCC-CCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc--
Q 008475 395 IAESLSEEEIAGLKEMFKAMDTDN-SGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-- 471 (564)
Q Consensus 395 ~~~~~~~~~~~~l~~~F~~~D~d~-~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-- 471 (564)
....++++++.+++++|..+|.|+ +|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+.++....
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~ 87 (161)
T 1dtl_A 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87 (161)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcc
Confidence 456789999999999999999999 99999999999999999999999999999999999999999999998876543
Q ss_pred --hhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 472 --KLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 472 --~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.......+..+|+.+|.|++|.|+.+||+.++..+| ++++++..+|..+|.|+||.|+|+||+.++...
T Consensus 88 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 160 (161)
T 1dtl_A 88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160 (161)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred cccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcC
Confidence 234567789999999999999999999999998887 899999999999999999999999999998643
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.2e-22 Score=175.89 Aligned_cols=143 Identities=33% Similarity=0.542 Sum_probs=129.7
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhh-
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLE- 474 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~- 474 (564)
...++++++.+++++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+..+.......
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 81 (153)
T 3ox6_A 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAET 81 (153)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCC
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccc
Confidence 3568899999999999999999999999999999999999999999999999999999999999999998875432221
Q ss_pred ----HHHHHHHHHHHhCCCCCCceeHHHHHHHHHh-CC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 475 ----REEHLVAAFQYFDKDGSGYITVDELQQACAE-HN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 475 ----~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~-~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
....+..+|+.+|.|++|.|+.+||+.++.. .| +++++++.+|..+|.|+||.|+|+||+.++.
T Consensus 82 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 82 ADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 2567889999999999999999999999987 66 8999999999999999999999999999874
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=177.00 Aligned_cols=135 Identities=20% Similarity=0.291 Sum_probs=122.9
Q ss_pred ccCCCCCCCCHHHHHHHHHhh------CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhC
Q 008475 414 MDTDNSGAITFDELKAGLRRY------GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFD 487 (564)
Q Consensus 414 ~D~d~~G~I~~~el~~~l~~~------~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D 487 (564)
-++|++|.|+.+||..+|+.+ +..++..+++.+|..+|.+++|.|+|+||+.++... ..++.+|+.+|
T Consensus 13 ~~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD 86 (174)
T 2i7a_A 13 GLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ 86 (174)
T ss_dssp CSCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC
T ss_pred ccCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc
Confidence 468999999999999999998 668889999999999999999999999999887543 46889999999
Q ss_pred CCCCCceeHHHHHHHHHhC----C--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCC
Q 008475 488 KDGSGYITVDELQQACAEH----N--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAP 561 (564)
Q Consensus 488 ~d~dG~I~~~e~~~~l~~~----~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~ 561 (564)
|++|+|+.+||+.+++.+ | +++++++.++..+| |+||.|+|+||+.++... +.+.++|+.+|+|++
T Consensus 87 -d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~ 158 (174)
T 2i7a_A 87 -TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL------EAMAKTFRNLSKDGK 158 (174)
T ss_dssp -SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH------HHHHHHHHHHCSSSS
T ss_pred -CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCC
Confidence 999999999999999988 7 78999999999999 999999999999999765 678999999999999
Q ss_pred C
Q 008475 562 G 562 (564)
Q Consensus 562 g 562 (564)
|
T Consensus 159 G 159 (174)
T 2i7a_A 159 G 159 (174)
T ss_dssp C
T ss_pred C
Confidence 9
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-22 Score=173.42 Aligned_cols=138 Identities=25% Similarity=0.528 Sum_probs=126.3
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh-hchhhHHHH
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEH 478 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~-~~~~~~~~~ 478 (564)
+++++.+++++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+.++.. .........
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 80 (142)
T 2bl0_C 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDI 80 (142)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHH
Confidence 3567889999999999999999999999999999999999999999999999999999999999998765 333345677
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 479 LVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 479 l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
+..+|+.+|.|++|.|+.+||+.++..+| +++++++.+|..+| |+||.|+|+||+.+|.
T Consensus 81 ~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 81 LRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp HHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 99999999999999999999999999887 89999999999999 9999999999998763
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.9e-22 Score=176.40 Aligned_cols=144 Identities=28% Similarity=0.534 Sum_probs=131.5
Q ss_pred hhhhHHHHHhHhhhhhccc-CCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh--
Q 008475 397 ESLSEEEIAGLKEMFKAMD-TDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL-- 473 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D-~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~-- 473 (564)
..++++++.+++++|..+| .+++|.|+.+||..+++.++..++..++..+|..+|.+++|.|+|+||+..+......
T Consensus 5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 84 (158)
T 2jnf_A 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEV 84 (158)
T ss_dssp TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccc
Confidence 4678899999999999999 9999999999999999999999999999999999999999999999999987654322
Q ss_pred ---hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 474 ---EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 474 ---~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.....+..+|+.+|.|++|.|+.+||+.++..+| ++++++..+|..+|.|+||.|+|+||+.++.+.
T Consensus 85 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 156 (158)
T 2jnf_A 85 NPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGG 156 (158)
T ss_dssp CTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSSC
T ss_pred chhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcc
Confidence 3456688999999999999999999999999877 889999999999999999999999999988654
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-22 Score=195.90 Aligned_cols=140 Identities=15% Similarity=0.144 Sum_probs=108.6
Q ss_pred eeecccccccCCeEEEEEEEccCCcE--EEEEEeccccCCC---------------------HHhHHHHHHHHHHHHhhc
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIE--FACKSISKRKLIS---------------------REDVEDVRREIQIMHHLA 157 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~--vavK~~~~~~~~~---------------------~~~~~~~~~E~~~l~~l~ 157 (564)
|.+.+.||+|+||.||+|.+..+|+. ||||++....... ......+.+|+.+|+.+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 78889999999999999998778999 9999875432110 011236789999999997
Q ss_pred CCCC--ccEEEEEEecCCeEEEEEeccCC-C----chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCCEeecCCCC
Q 008475 158 GHKN--IVTIKGAYEDSLCVHIVMELCAG-G----ELFDRIIQRGHYSERKAAELTRIIVGVVEACH-SLGVMHRDLKPE 229 (564)
Q Consensus 158 ~h~n--iv~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~iiH~Dlkp~ 229 (564)
|++ ++.+++. ...+|||||+.+ | +|.+.... .++..+..++.||+.||.||| +.||+||||||+
T Consensus 129 -~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~ 200 (258)
T 1zth_A 129 -EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEY 200 (258)
T ss_dssp -HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTT
T ss_pred -hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHH
Confidence 775 4455543 246899999932 3 66655422 345678899999999999999 999999999999
Q ss_pred cEEeecCCCCCcEEEeeCCCcccc
Q 008475 230 NFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 230 NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
|||+ +. .++|+|||+|...
T Consensus 201 NILl---~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 201 NIMY---ID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SEEE---SS--SEEECCCTTCEET
T ss_pred HEEE---cC--cEEEEECcccccC
Confidence 9999 44 8999999999764
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.86 E-value=4e-21 Score=172.03 Aligned_cols=146 Identities=36% Similarity=0.610 Sum_probs=133.3
Q ss_pred hhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh-
Q 008475 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL- 473 (564)
Q Consensus 395 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~- 473 (564)
+...++++++.+++++|..+|.|++|.|+..||..++..++..++..++..+|..+|.+++|.|+|+||+..+......
T Consensus 10 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 89 (162)
T 1top_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED 89 (162)
T ss_dssp HHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc
Confidence 3457899999999999999999999999999999999999999999999999999999999999999999887654322
Q ss_pred h---HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 474 E---REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 474 ~---~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
. ....+..+|+.+|.|++|.|+.+||+.++..+| ++++++..+|..+|.|+||.|+|+||+.++...
T Consensus 90 ~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 2 467789999999999999999999999999887 899999999999999999999999999998754
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-21 Score=174.97 Aligned_cols=141 Identities=23% Similarity=0.336 Sum_probs=130.0
Q ss_pred hhhhcccCCCCCCCCHHHHHHHHHhhCC-----CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHH
Q 008475 409 EMFKAMDTDNSGAITFDELKAGLRRYGS-----TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAF 483 (564)
Q Consensus 409 ~~F~~~D~d~~G~I~~~el~~~l~~~~~-----~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F 483 (564)
+.|..+|.|++|.|+.+||..+++.++. .++..++..+|..+|.+++|.|+|+||+.++... ..+..+|
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F 76 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENF 76 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence 4588999999999999999999999886 6789999999999999999999999999877542 5688999
Q ss_pred HHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCC
Q 008475 484 QYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAP 561 (564)
Q Consensus 484 ~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~ 561 (564)
+.+|.|++|.|+.+||+.++..+| +++++++.++..+ |++|.|+|+||+.++... +.+.++|+.+|+|++
T Consensus 77 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~ 148 (165)
T 1k94_A 77 MTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL------RALTDFFRKRDHLQQ 148 (165)
T ss_dssp HHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH------HHHHHHHHTTCTTCC
T ss_pred HHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCC
Confidence 999999999999999999999887 7899999999999 899999999999999765 788999999999999
Q ss_pred CC
Q 008475 562 GS 563 (564)
Q Consensus 562 g~ 563 (564)
|+
T Consensus 149 G~ 150 (165)
T 1k94_A 149 GS 150 (165)
T ss_dssp SE
T ss_pred Ce
Confidence 95
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.8e-22 Score=174.80 Aligned_cols=137 Identities=24% Similarity=0.459 Sum_probs=122.3
Q ss_pred HHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhc-CCCCCCccchhhhHHHHhhh------chhhH
Q 008475 403 EIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAA-DVDNSGTIDYGEFIAATVHL------NKLER 475 (564)
Q Consensus 403 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~-D~~~~g~I~~~eF~~~~~~~------~~~~~ 475 (564)
++.+++++|..+|.|++|.|+.+||..+++.++..++..++..+|..+ |.+++|.|+|+||+..+... .....
T Consensus 2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 81 (148)
T 1m45_A 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAK 81 (148)
T ss_dssp -CCCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhcccccccc
Confidence 455788999999999999999999999999999999999999999999 99999999999999987665 33344
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
...+..+|+.+|.|++|.|+.+||+.++..+| ++++++..+|..+|.|+||.|+|+||+.++.+
T Consensus 82 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 82 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp THHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 57789999999999999999999999999887 78999999999999999999999999998864
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.9e-23 Score=190.39 Aligned_cols=161 Identities=71% Similarity=1.143 Sum_probs=139.4
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~ 476 (564)
..++++++.+++++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+..+..+......
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~ 81 (188)
T 1s6i_A 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE 81 (188)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHH
Confidence 35778888999999999999999999999999999999999999999999999999999999999999988665443344
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC--CCChHHHHHHHh
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV--GLGRRTMRNSLN 554 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~--~~~~~~~~~~f~ 554 (564)
..+..+|+.+|.|++|.|+.+||+.++..+|+++++++++|..+|.|+||.|+|+||+.++.+... +.....+.++|+
T Consensus 82 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~~~~~ 161 (188)
T 1s6i_A 82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLN 161 (188)
T ss_dssp CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCCSSTTCCSCTTSSSCC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHcCCCCCccHhHhccCcc
Confidence 568899999999999999999999999999999999999999999999999999999999975422 233444555555
Q ss_pred HHc
Q 008475 555 MSM 557 (564)
Q Consensus 555 ~~D 557 (564)
++|
T Consensus 162 ~~~ 164 (188)
T 1s6i_A 162 LRD 164 (188)
T ss_dssp CCC
T ss_pred hhh
Confidence 543
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=173.25 Aligned_cols=142 Identities=25% Similarity=0.448 Sum_probs=130.8
Q ss_pred hhhHHHHHhHhhhhhcccC--CCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch--h
Q 008475 398 SLSEEEIAGLKEMFKAMDT--DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK--L 473 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~--d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~--~ 473 (564)
.++++++.+++++|..+|. |++|.|+.+||..++..++..++..++..+ ..+|.+++|.|+|+||+.++..... .
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 80 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQ 80 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence 4688899999999999999 999999999999999999999999999999 9999999999999999998776543 3
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHH--hCCCCCcceeHHHHHHHHHcC
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIRE--VDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~--~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.....+..+|+.+|.|++|.|+.+||+.++..+| ++++++..+|.. +|.|++|.|+|+||+.++...
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_C 81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151 (156)
T ss_dssp CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence 4467789999999999999999999999999887 899999999999 999999999999999999765
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=166.72 Aligned_cols=139 Identities=24% Similarity=0.428 Sum_probs=127.8
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhc---CCCCCCccchhhhHHHHhhh---ch
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAA---DVDNSGTIDYGEFIAATVHL---NK 472 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~---D~~~~g~I~~~eF~~~~~~~---~~ 472 (564)
++++++.+++++|..+|.+++|.|+.+||..++..++..++..++..+|..+ |.++ |.|+|+||+..+... ..
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~ 80 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKD 80 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCC
Confidence 6788899999999999999999999999999999999999999999999999 9999 999999999887654 22
Q ss_pred hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 473 LEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 473 ~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
......+..+|+.+|.+++|.|+.+||+.++..+| ++++++..+|.. |.|++|.|+|+||+.++.+
T Consensus 81 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 81 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred cchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 34567789999999999999999999999999887 899999999999 9999999999999998864
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.85 E-value=7.6e-21 Score=172.70 Aligned_cols=141 Identities=20% Similarity=0.291 Sum_probs=126.9
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHH----HHHhhCCCCCHHHHH-----------HHHHhcCCCCCCccchhhhH
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKA----GLRRYGSTLKDTEIR-----------DLMDAADVDNSGTIDYGEFI 464 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~----~l~~~~~~~~~~~~~-----------~~~~~~D~~~~g~I~~~eF~ 464 (564)
+++++.+++++|..+|.|++|.|+.+||.. +++.++..++..++. .+|..+|.+++|.|+|+||+
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~ 81 (176)
T 1nya_A 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI 81 (176)
T ss_dssp CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence 567889999999999999999999999999 678889998888876 88999999999999999999
Q ss_pred HHHhhhchhh--------HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHH
Q 008475 465 AATVHLNKLE--------REEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAM 536 (564)
Q Consensus 465 ~~~~~~~~~~--------~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~ 536 (564)
.++....... ....+..+|+.+|.|++|.|+.+||+.++..+|++++++..+|..+|.|+||.|+|+||+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~ 161 (176)
T 1nya_A 82 RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTA 161 (176)
T ss_dssp HHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHH
T ss_pred HHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 8876543221 14668999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcC
Q 008475 537 MQKG 540 (564)
Q Consensus 537 ~~~~ 540 (564)
+...
T Consensus 162 ~~~~ 165 (176)
T 1nya_A 162 VRDF 165 (176)
T ss_dssp HSCC
T ss_pred HHHH
Confidence 9765
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=169.30 Aligned_cols=138 Identities=26% Similarity=0.497 Sum_probs=125.7
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh-chhhHHH
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL-NKLEREE 477 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-~~~~~~~ 477 (564)
|+++++.+++++|..+|.|++|.|+.+||..+++.++..++..++..++.. ++|.|+|+||+.++... .......
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~ 76 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPED 76 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence 467889999999999999999999999999999999999999999888876 78999999999987753 3334567
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 478 HLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 478 ~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+..+|+.+|.|++|.|+.+||+.++..+| +++++++.+|..+|.|+||.|+|+||+.++.+.
T Consensus 77 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 141 (143)
T 3j04_B 77 VIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHG 141 (143)
T ss_dssp HHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHSS
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcc
Confidence 899999999999999999999999999887 899999999999999999999999999999764
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-21 Score=173.81 Aligned_cols=141 Identities=22% Similarity=0.439 Sum_probs=119.7
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC--CCCccchhhhHHHHhhhchh--
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD--NSGTIDYGEFIAATVHLNKL-- 473 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~--~~g~I~~~eF~~~~~~~~~~-- 473 (564)
.++++++.+++++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.+ ++|.|+|+||+.++......
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~ 82 (151)
T 1w7j_B 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG 82 (151)
T ss_dssp --------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCC
Confidence 47888999999999999999999999999999999999999999999999999999 99999999999987654321
Q ss_pred -hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 474 -EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 474 -~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
.....+..+|+.+|.|++|.|+.+||+.++..+| ++++++..+|..+| |+||.|+|+||+.++.+
T Consensus 83 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~ 150 (151)
T 1w7j_B 83 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHILS 150 (151)
T ss_dssp -----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence 2345678899999999999999999999999988 89999999999999 99999999999998753
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-21 Score=189.00 Aligned_cols=166 Identities=20% Similarity=0.353 Sum_probs=142.3
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCH------HHHHHHHHhcCCCCCCccchhhhHHHHhhh-
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKD------TEIRDLMDAADVDNSGTIDYGEFIAATVHL- 470 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~------~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~- 470 (564)
.+++.+...++++|..+|.|++|.|+.+||..+++.++..++. ..+..+|..+|.+++|.|+|+||+..+...
T Consensus 9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~ 88 (263)
T 2f33_A 9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEE 88 (263)
T ss_dssp TTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCT
T ss_pred hcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhh
Confidence 5677788889999999999999999999999999988755444 788999999999999999999999887532
Q ss_pred --------chhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC----C--CCHHHHHH----HHHHhCCCCCcceeHHH
Q 008475 471 --------NKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH----N--MTDVLLED----IIREVDQDNDGRIDYGE 532 (564)
Q Consensus 471 --------~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~--~~~~~~~~----~~~~~d~d~dg~I~~~e 532 (564)
........+..+|+.+|.|++|.|+.+||..++..+ | ++++++.. +|..+|.|++|.|+|+|
T Consensus 89 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~e 168 (263)
T 2f33_A 89 NFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTE 168 (263)
T ss_dssp THHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHH
T ss_pred hHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence 223446779999999999999999999999999865 4 78888776 99999999999999999
Q ss_pred HHHHHHcC--------CCCCChHHHHHHHhHHccCCCCC
Q 008475 533 FVAMMQKG--------NVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 533 F~~~~~~~--------~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
|+.++... ........+..+|+.+|.||+|+
T Consensus 169 f~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~ 207 (263)
T 2f33_A 169 MARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGY 207 (263)
T ss_dssp HHHHSCTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSC
T ss_pred HHHHHHHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCc
Confidence 99987541 23345688999999999999996
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-21 Score=177.75 Aligned_cols=144 Identities=26% Similarity=0.327 Sum_probs=120.4
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHH-----HHHHhhCCCCCHH-----HHHHHHHhcCCCCCCccchhhhHH
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELK-----AGLRRYGSTLKDT-----EIRDLMDAADVDNSGTIDYGEFIA 465 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~-----~~l~~~~~~~~~~-----~~~~~~~~~D~~~~g~I~~~eF~~ 465 (564)
...++++++.+++++|..+|.|++|.|+.+||. .+++.+|..++.. ++..+|..+|.+++|.|+|+||+.
T Consensus 11 ~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~ 90 (195)
T 1qv0_A 11 TDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLD 90 (195)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred cccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHH
Confidence 334589999999999999999999999999999 7888888887766 688999999999999999999998
Q ss_pred HHhhhchhh-----------HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHH
Q 008475 466 ATVHLNKLE-----------REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGE 532 (564)
Q Consensus 466 ~~~~~~~~~-----------~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~e 532 (564)
++....... ....+..+|+.+|.|++|.|+.+||+.++..+| +++++++++|..+|.|+||.|+|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~e 170 (195)
T 1qv0_A 91 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170 (195)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHH
T ss_pred HHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHH
Confidence 875543211 112233899999999999999999999998877 7899999999999999999999999
Q ss_pred HHHHHHc
Q 008475 533 FVAMMQK 539 (564)
Q Consensus 533 F~~~~~~ 539 (564)
|+.++..
T Consensus 171 F~~~~~~ 177 (195)
T 1qv0_A 171 MTRQHLG 177 (195)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988853
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=173.24 Aligned_cols=143 Identities=12% Similarity=0.183 Sum_probs=129.2
Q ss_pred hhhhHHHHHhHhhhhhcc-cCCCCCCCCHHHHHHHHHhh----CCCCCHHHHHHHH-----------HhcCCCCCCccch
Q 008475 397 ESLSEEEIAGLKEMFKAM-DTDNSGAITFDELKAGLRRY----GSTLKDTEIRDLM-----------DAADVDNSGTIDY 460 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~----~~~~~~~~~~~~~-----------~~~D~~~~g~I~~ 460 (564)
..+++++.++++++|..+ |.|++|.|+.+||..++..+ +..++..++..++ ..+|.+++|.|++
T Consensus 4 ~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~ 83 (191)
T 2ccm_A 4 HQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTK 83 (191)
T ss_dssp CCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEH
T ss_pred hhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECH
Confidence 456788889999999999 99999999999999999988 8888888888888 9999999999999
Q ss_pred hhhHHHHhhhch---------hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHH
Q 008475 461 GEFIAATVHLNK---------LEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYG 531 (564)
Q Consensus 461 ~eF~~~~~~~~~---------~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~ 531 (564)
+||+..+..... ......+..+|+.+|.|++|.|+.+||..++..+|+++++++.+|..+|.|+||.|+|+
T Consensus 84 ~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~ 163 (191)
T 2ccm_A 84 EEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTRE 163 (191)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTTTTSCCBHH
T ss_pred HHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCcCHH
Confidence 999988765432 23356789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc
Q 008475 532 EFVAMMQK 539 (564)
Q Consensus 532 eF~~~~~~ 539 (564)
||+.++..
T Consensus 164 Ef~~~~~~ 171 (191)
T 2ccm_A 164 IFARLWTE 171 (191)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998864
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-20 Score=167.98 Aligned_cols=140 Identities=24% Similarity=0.450 Sum_probs=127.1
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCC-CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh-chhh
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGS-TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL-NKLE 474 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-~~~~ 474 (564)
..++++++..++.+|..+|.|++|.|+.+||..++..++. .++..++..++... +|.|+|+||+.++... ....
T Consensus 17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~ 92 (166)
T 2mys_B 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGAD 92 (166)
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCC
Confidence 3678899999999999999999999999999999999999 99999999999864 7999999999887654 2334
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
....+..+|+.+|.|++|.|+.+||+.++..+| +++++++.+|..+|.|+||.|+|+||+.++...
T Consensus 93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence 567889999999999999999999999999887 899999999999999999999999999999765
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-20 Score=176.39 Aligned_cols=155 Identities=26% Similarity=0.460 Sum_probs=131.1
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHH
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHL 479 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l 479 (564)
..+++..++++|+.+|.|++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+..+...........+
T Consensus 32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~ 111 (204)
T 3e3r_A 32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVI 111 (204)
T ss_dssp --------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHH
T ss_pred CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999988766555667889
Q ss_pred HHHHHHhCCCCCCceeHHHHHHHHHhC-------C--CCHHHHHHHHHHhCC-CCCcceeHHHHHHHHHcCCCCC-ChHH
Q 008475 480 VAAFQYFDKDGSGYITVDELQQACAEH-------N--MTDVLLEDIIREVDQ-DNDGRIDYGEFVAMMQKGNVGL-GRRT 548 (564)
Q Consensus 480 ~~~F~~~D~d~dG~I~~~e~~~~l~~~-------~--~~~~~~~~~~~~~d~-d~dg~I~~~eF~~~~~~~~~~~-~~~~ 548 (564)
..+|+.+|.|++|.|+.+||..++... | .++++++.+|..+|. |+||.|+|+||+.++...+..+ +++.
T Consensus 112 ~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~~~~~d~~ 191 (204)
T 3e3r_A 112 AAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSASMNTDEE 191 (204)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHHHCSSHHH
T ss_pred HHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCccCCChHH
Confidence 999999999999999999999999743 3 556789999999998 9999999999999999876444 5566
Q ss_pred HHHHHh
Q 008475 549 MRNSLN 554 (564)
Q Consensus 549 ~~~~f~ 554 (564)
+..+++
T Consensus 192 f~~~~~ 197 (204)
T 3e3r_A 192 FVAMMT 197 (204)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.84 E-value=8.1e-21 Score=175.05 Aligned_cols=142 Identities=23% Similarity=0.319 Sum_probs=123.6
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHH-----HHHHhhCCCCCHH-----HHHHHHHhcCCCCCCccchhhhHHHH
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELK-----AGLRRYGSTLKDT-----EIRDLMDAADVDNSGTIDYGEFIAAT 467 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~-----~~l~~~~~~~~~~-----~~~~~~~~~D~~~~g~I~~~eF~~~~ 467 (564)
.++++++.+++++|..+|.|++|.|+.+||. .+++.++..++.. ++..+|..+|.+++|.|+|+||+..+
T Consensus 9 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~ 88 (191)
T 1uhk_A 9 FDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGW 88 (191)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHH
Confidence 4578889999999999999999999999999 7888888888777 68999999999999999999999887
Q ss_pred hhhchhh-------HHHHH----HHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHH
Q 008475 468 VHLNKLE-------REEHL----VAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFV 534 (564)
Q Consensus 468 ~~~~~~~-------~~~~l----~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~ 534 (564)
....... ..+.+ ..+|+.+|.|++|.|+.+||+.++..+| +++++++.+|..+|.|+||.|+|+||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~ 168 (191)
T 1uhk_A 89 KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMT 168 (191)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHH
T ss_pred HHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 6542211 11223 3899999999999999999999998877 789999999999999999999999999
Q ss_pred HHHHc
Q 008475 535 AMMQK 539 (564)
Q Consensus 535 ~~~~~ 539 (564)
.++..
T Consensus 169 ~~~~~ 173 (191)
T 1uhk_A 169 RQHLG 173 (191)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98853
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.7e-21 Score=177.33 Aligned_cols=144 Identities=19% Similarity=0.290 Sum_probs=122.9
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCC--CCCHHHHHHHH-------HhcCCCCCCccchhhhHHHH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGS--TLKDTEIRDLM-------DAADVDNSGTIDYGEFIAAT 467 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~--~~~~~~~~~~~-------~~~D~~~~g~I~~~eF~~~~ 467 (564)
..++++++.+++++|..+|.|++|.|+.+||..++..++. .++..++..++ ..+|.+++|.|+|+||+.++
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~ 107 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEAN 107 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHH
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 5678888999999999999999999999999999999887 89999999999 99999999999999999887
Q ss_pred h---------hhch-hh-HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHH
Q 008475 468 V---------HLNK-LE-REEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAM 536 (564)
Q Consensus 468 ~---------~~~~-~~-~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~ 536 (564)
. .+.. .. ..+.+..+|+.+|.|++|.|+.+||+.++..+|+++++++.+|..+|.|+||.|+|+||+.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~I~~~EF~~~ 187 (208)
T 2hpk_A 108 RVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELVHL 187 (208)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHHHHHHHCTTCCSSBCHHHHHHH
T ss_pred HHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 5 2221 12 23347899999999999999999999999999999999999999999999999999999998
Q ss_pred HHcC
Q 008475 537 MQKG 540 (564)
Q Consensus 537 ~~~~ 540 (564)
+...
T Consensus 188 ~~~~ 191 (208)
T 2hpk_A 188 FRKF 191 (208)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8654
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-20 Score=163.49 Aligned_cols=131 Identities=29% Similarity=0.527 Sum_probs=121.4
Q ss_pred HhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh--chhhHHHHHHHHHH
Q 008475 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL--NKLEREEHLVAAFQ 484 (564)
Q Consensus 407 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~--~~~~~~~~l~~~F~ 484 (564)
++++|..+|.|++|.|+.+||..+++.++..++..++..+|.. +++|.|+|+||+..+... ........+..+|+
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~ 83 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFR 83 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHH
Confidence 8999999999999999999999999999999999999999988 789999999999988765 34456778999999
Q ss_pred HhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 485 YFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 485 ~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+|.|++|.|+.+||+.++..+| +++++++.+|..+|.|+||.|+|+||+.++...
T Consensus 84 ~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 141 (145)
T 2bl0_B 84 ALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVTG 141 (145)
T ss_dssp HHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHHS
T ss_pred HhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHhc
Confidence 99999999999999999999988 899999999999999999999999999998764
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.83 E-value=5.9e-20 Score=163.51 Aligned_cols=140 Identities=20% Similarity=0.423 Sum_probs=124.9
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh-chhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL-NKLE 474 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-~~~~ 474 (564)
...++++++..++.+|..+|.|++|.|+.+||..+++.+|..++..++..++. +++|.|+|+||+.++... ....
T Consensus 9 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~ 84 (156)
T 1wdc_B 9 LTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTD 84 (156)
T ss_dssp ---CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCC
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCC
Confidence 45678899999999999999999999999999999999999999999999886 468999999999887643 3334
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
....+..+|+.+|.|++|.|+.+||+.++..+| +++++++.+|..+|.| ||.|+|+||+.++...
T Consensus 85 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 85 SEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcC
Confidence 567799999999999999999999999999887 8999999999999999 9999999999999765
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-20 Score=168.59 Aligned_cols=138 Identities=22% Similarity=0.298 Sum_probs=123.1
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhC----CCCCHHH-H--------HHHHHhcCCCCCCccchhhhHHH
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG----STLKDTE-I--------RDLMDAADVDNSGTIDYGEFIAA 466 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~----~~~~~~~-~--------~~~~~~~D~~~~g~I~~~eF~~~ 466 (564)
+++++.+++++|..+|.|++|.|+.+||..++..++ ..++..+ + +.+|..+| ++|.|+|+||+..
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~ 78 (174)
T 1q80_A 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINS 78 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHH
Confidence 357788999999999999999999999999999888 8888877 6 46888898 8999999999998
Q ss_pred Hhhhch-----hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 467 TVHLNK-----LEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 467 ~~~~~~-----~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
+..... ......+..+|+.+|.|++|.|+.+||+.++..+|+++++++.+|..+|.|+||.|+|+||+.++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 156 (174)
T 1q80_A 79 MKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCceEeHHHHHHHHHH
Confidence 766543 2345778999999999999999999999999998999999999999999999999999999998853
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.3e-20 Score=172.81 Aligned_cols=139 Identities=24% Similarity=0.372 Sum_probs=125.7
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc------
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN------ 471 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~------ 471 (564)
.++++++.+++++|..+|.|++|.|+.+||..+ ..++..+. +..+|..+|.+++|.|+|+||+.++....
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~ 97 (202)
T 2bec_A 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDED 97 (202)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhc
Confidence 678899999999999999999999999999999 77776655 89999999999999999999999887654
Q ss_pred -----------hhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC-C--CCHHHHHHHHHH----hCCCCCcceeHHHH
Q 008475 472 -----------KLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH-N--MTDVLLEDIIRE----VDQDNDGRIDYGEF 533 (564)
Q Consensus 472 -----------~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~-~--~~~~~~~~~~~~----~d~d~dg~I~~~eF 533 (564)
.......+..+|+.+|.|++|.|+.+||+.++..+ | +++++++.++.. +|.|+||.|+|+||
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF 177 (202)
T 2bec_A 98 TETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEF 177 (202)
T ss_dssp HC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHH
T ss_pred ccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHH
Confidence 23456789999999999999999999999999988 7 889999998888 99999999999999
Q ss_pred HHHHHcC
Q 008475 534 VAMMQKG 540 (564)
Q Consensus 534 ~~~~~~~ 540 (564)
+.++...
T Consensus 178 ~~~~~~~ 184 (202)
T 2bec_A 178 TKSLEKM 184 (202)
T ss_dssp HHTTTTS
T ss_pred HHHHHHh
Confidence 9988754
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.6e-21 Score=179.72 Aligned_cols=146 Identities=23% Similarity=0.315 Sum_probs=126.5
Q ss_pred hhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHH-HHHhhCCCCCHHHHHHHHHhc---------CCCCCCccchhhhH
Q 008475 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKA-GLRRYGSTLKDTEIRDLMDAA---------DVDNSGTIDYGEFI 464 (564)
Q Consensus 395 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l~~~~~~~~~~~~~~~~~~~---------D~~~~g~I~~~eF~ 464 (564)
+...++++++..++++|..+|.|++|.|+.+||.. +++.++..++..++..++..+ |.+++|.|+|+||+
T Consensus 41 l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~ 120 (226)
T 2lvv_A 41 IPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFL 120 (226)
T ss_dssp SCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHH
T ss_pred hchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHH
Confidence 45578999999999999999999999999999998 556678777766666666666 99999999999999
Q ss_pred HHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 465 AATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 465 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.++...........+..+|+.+|.|++|+|+.+||+.++..+ |++..++.++|..+|.|+||.|+|+||+.+|...
T Consensus 121 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 199 (226)
T 2lvv_A 121 EFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFSCWAVTK 199 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 875544444556789999999999999999999999999876 7776779999999999999999999999999754
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-20 Score=172.43 Aligned_cols=156 Identities=26% Similarity=0.418 Sum_probs=126.8
Q ss_pred hhhHHHHHhHhhhhhcccCC-CCCCCCHHHHHHHHHhhCCCC-CHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhH
Q 008475 398 SLSEEEIAGLKEMFKAMDTD-NSGAITFDELKAGLRRYGSTL-KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d-~~G~I~~~el~~~l~~~~~~~-~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~ 475 (564)
.++.++ ++++|..+|.+ ++|.|+.+||..++..++... ....+..+|..+|.+++|.|+|+||..++........
T Consensus 21 ~~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 97 (193)
T 1bjf_A 21 DFTEHE---IQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 97 (193)
T ss_dssp SCCHHH---HHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred CCCHHH---HHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCH
Confidence 455555 45677788888 899999999999999887644 4677899999999999999999999998876655566
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhC----C----CC------HHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEH----N----MT------DVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~----~~------~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
...+..+|+.+|.|++|.|+.+||..++..+ | ++ .+.+..+|..+|.|+||.|+++||+.++...
T Consensus 98 ~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~- 176 (193)
T 1bjf_A 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSD- 176 (193)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHC-
T ss_pred HHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcC-
Confidence 7889999999999999999999999998752 3 33 3458999999999999999999999999643
Q ss_pred CCCChHHHHHHHhHHccCCCCC
Q 008475 542 VGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 542 ~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+.++| .+|+||||.
T Consensus 177 -----~~~~~~~-~~D~~~dG~ 192 (193)
T 1bjf_A 177 -----PSIVRLL-QCDPSSAGQ 192 (193)
T ss_dssp -----THHHHTT-CC-------
T ss_pred -----HHHHHHh-ccCCCCCCC
Confidence 6788999 999999995
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-20 Score=171.12 Aligned_cols=142 Identities=15% Similarity=0.322 Sum_probs=126.9
Q ss_pred hhHHHHHhHhhhhhcc-cCCCCCCCCHHHHHHHHHhhC----CCCCHHHHHHH-----------HHhcCCCCCCccchhh
Q 008475 399 LSEEEIAGLKEMFKAM-DTDNSGAITFDELKAGLRRYG----STLKDTEIRDL-----------MDAADVDNSGTIDYGE 462 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~~----~~~~~~~~~~~-----------~~~~D~~~~g~I~~~e 462 (564)
+++++.++++++|..+ |.|++|.|+.+||..++..++ ..++..++..+ |..+|.+++|.|+++|
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~E 81 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence 5678889999999999 999999999999999999887 78888888755 9999999999999999
Q ss_pred hHHHHhhhchh---------hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHH
Q 008475 463 FIAATVHLNKL---------EREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEF 533 (564)
Q Consensus 463 F~~~~~~~~~~---------~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF 533 (564)
|+.++...... .....+..+|+.+|.|++|.|+.+||..++..+|++++++..+|..+|.|+||.|+|+||
T Consensus 82 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~ef 161 (185)
T 2sas_A 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRY 161 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHHH
T ss_pred HHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHhcCCCCCcCcHHHH
Confidence 99887654221 245778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcC
Q 008475 534 VAMMQKG 540 (564)
Q Consensus 534 ~~~~~~~ 540 (564)
+.++...
T Consensus 162 ~~~~~~~ 168 (185)
T 2sas_A 162 KELYYRL 168 (185)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988653
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.6e-20 Score=162.78 Aligned_cols=137 Identities=32% Similarity=0.556 Sum_probs=121.4
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch-hhHHHH
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK-LEREEH 478 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~-~~~~~~ 478 (564)
+++++.+++++|..+|.|++|.|+.+|| ..+..++..+ ++..+|..+|.+++|.|+|+||+..+..... ......
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 76 (155)
T 3ll8_B 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQK 76 (155)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHH
T ss_pred CHHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHH
Confidence 3578889999999999999999999999 6677776554 6889999999999999999999998876533 255678
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHHh-CC--CCHHHHHHHHHH----hCCCCCcceeHHHHHHHHHcC
Q 008475 479 LVAAFQYFDKDGSGYITVDELQQACAE-HN--MTDVLLEDIIRE----VDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 479 l~~~F~~~D~d~dG~I~~~e~~~~l~~-~~--~~~~~~~~~~~~----~d~d~dg~I~~~eF~~~~~~~ 540 (564)
+..+|+.+|.|++|.|+.+||+.++.. .| ++++++.+++.. +|.|+||.|+|+||+.++...
T Consensus 77 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 145 (155)
T 3ll8_B 77 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 145 (155)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 999999999999999999999999987 45 889999998888 999999999999999999876
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=166.35 Aligned_cols=154 Identities=20% Similarity=0.331 Sum_probs=132.4
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCC-CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST-LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~ 475 (564)
..++.+++..+.+.|..+ |++|.|+.+||..++..++.. .+..++..+|..+|.+++|.|+|+||+.++........
T Consensus 13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 90 (183)
T 1s6c_A 13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 90 (183)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCH
Confidence 467888877777777664 789999999999999998865 78999999999999999999999999998876665566
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhC----C------CC----HHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEH----N------MT----DVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~------~~----~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
.+.+..+|+.+|.|++|.|+.+||..++..+ | ++ .+++.++|..+|.|+||.|+|+||+.++...
T Consensus 91 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~- 169 (183)
T 1s6c_A 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQED- 169 (183)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSC-
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcC-
Confidence 7889999999999999999999999999765 5 33 3889999999999999999999999998654
Q ss_pred CCCChHHHHHHHhHHcc
Q 008475 542 VGLGRRTMRNSLNMSMR 558 (564)
Q Consensus 542 ~~~~~~~~~~~f~~~D~ 558 (564)
..+.+.|+.+|.
T Consensus 170 -----~~~~~~l~~~d~ 181 (183)
T 1s6c_A 170 -----DNIMRSLQLFQN 181 (183)
T ss_dssp -----CHHHHHHHHHHH
T ss_pred -----hHHHHHHHHhhc
Confidence 567888888774
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.82 E-value=6.7e-21 Score=186.06 Aligned_cols=166 Identities=19% Similarity=0.382 Sum_probs=137.8
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHH----hhCC--CCCHHHHHH----HHHhcCCCCCCccchhhhHHHH
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLR----RYGS--TLKDTEIRD----LMDAADVDNSGTIDYGEFIAAT 467 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~----~~~~--~~~~~~~~~----~~~~~D~~~~g~I~~~eF~~~~ 467 (564)
.++..+..+++++|..+|.|++|.|+.+||..+++ .+|. .++..++.. +|..+|.+++|.|+|+||+..+
T Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~ 83 (272)
T 2be4_A 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI 83 (272)
T ss_dssp CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 45566677899999999999999999999999999 8898 889888876 4578899999999999999884
Q ss_pred h-----------hhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC----C--CCHHHHH----HHHHHhCCCCCc
Q 008475 468 V-----------HLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH----N--MTDVLLE----DIIREVDQDNDG 526 (564)
Q Consensus 468 ~-----------~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~--~~~~~~~----~~~~~~d~d~dg 526 (564)
. ..........+..+|+.+|.|++|.|+.+||..++..+ | ++++++. .+|..+|.|+||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg 163 (272)
T 2be4_A 84 LPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDG 163 (272)
T ss_dssp SCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSS
T ss_pred hhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCC
Confidence 2 22223445778999999999999999999999999865 4 6777765 499999999999
Q ss_pred ceeHHHHHHHHHcCC------------CCCChHHHHHHHhHHccCCCCC
Q 008475 527 RIDYGEFVAMMQKGN------------VGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 527 ~I~~~eF~~~~~~~~------------~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.|+|+||+.++.... .....+.+..+|+.+|.||+|+
T Consensus 164 ~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~ 212 (272)
T 2be4_A 164 RLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGA 212 (272)
T ss_dssp EEEHHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCSE
T ss_pred cCcHHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhCCCCCCe
Confidence 999999999875421 1123467899999999999995
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=170.43 Aligned_cols=154 Identities=23% Similarity=0.347 Sum_probs=135.0
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhh-CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY-GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~ 475 (564)
..++.++++.+++.|.. .+++|.|+.+||..++..+ +.......++.+|..+|.+++|.|+|+||+.++........
T Consensus 59 ~~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~ 136 (229)
T 3dd4_A 59 SKFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTV 136 (229)
T ss_dssp HHHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCCh
Confidence 36788899999999977 5788999999999999985 45566777899999999999999999999998877666666
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhC------------C--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEH------------N--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~------------~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
.+.++.+|+.+|.|++|.|+.+||..++..+ + +++++++.+|..+|.|+||.|+|+||++++.+.
T Consensus 137 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~- 215 (229)
T 3dd4_A 137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKD- 215 (229)
T ss_dssp HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTC-
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhC-
Confidence 7889999999999999999999999999764 2 566889999999999999999999999999865
Q ss_pred CCCChHHHHHHHhHHcc
Q 008475 542 VGLGRRTMRNSLNMSMR 558 (564)
Q Consensus 542 ~~~~~~~~~~~f~~~D~ 558 (564)
..+.++|+.||.
T Consensus 216 -----~~~~~~~~~~D~ 227 (229)
T 3dd4_A 216 -----ENIMRSMQLFEN 227 (229)
T ss_dssp -----HHHHHHHHHHTT
T ss_pred -----HHHHHHHHhccc
Confidence 788999999985
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=163.05 Aligned_cols=138 Identities=22% Similarity=0.333 Sum_probs=119.6
Q ss_pred HHHhHhhhhhcccCCCCCCCCHHHHHHHH----HhhCCCCCHHHHHHH-----------HHhcCCCCCCccchhhhHHHH
Q 008475 403 EIAGLKEMFKAMDTDNSGAITFDELKAGL----RRYGSTLKDTEIRDL-----------MDAADVDNSGTIDYGEFIAAT 467 (564)
Q Consensus 403 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l----~~~~~~~~~~~~~~~-----------~~~~D~~~~g~I~~~eF~~~~ 467 (564)
++++++++|..+|.|++|.|+.+||..++ +.++..++..++..+ |..+|.+++|.|+|+||+.++
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 35678999999999999999999999975 456888887777644 799999999999999999876
Q ss_pred hhhchhh-------HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 468 VHLNKLE-------REEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 468 ~~~~~~~-------~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
....... ....+..+|+.+|.|++|.|+.+||..++..+|++++++..+|..+|.|+||.|+|+||+.++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 6543221 134588999999999999999999999999999999999999999999999999999999988653
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.2e-20 Score=171.26 Aligned_cols=140 Identities=20% Similarity=0.393 Sum_probs=127.5
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh-chhhH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL-NKLER 475 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-~~~~~ 475 (564)
..++++++..++++|..+|.|++|.|+.+||..+|+.+|..++..++..++..+ +|.|+|+||+.++... .....
T Consensus 49 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~ 124 (196)
T 3dtp_E 49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDE 124 (196)
T ss_dssp CSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCC
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCc
Confidence 457888899999999999999999999999999999999999999999999887 7999999999988653 33345
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
...+..+|+.+|.|++|+|+.+||+.+| .+| ++++++..+|..+|.|+||.|+|+||+.+|...+
T Consensus 125 ~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~ 191 (196)
T 3dtp_E 125 EDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKGA 191 (196)
T ss_dssp HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcCC
Confidence 6778999999999999999999999999 988 8999999999999999999999999999997653
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=198.79 Aligned_cols=152 Identities=21% Similarity=0.316 Sum_probs=141.0
Q ss_pred hhhHHH-HHhHhhhhhcccCCCCCCCCHHHHHHHHHhh--------CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 398 SLSEEE-IAGLKEMFKAMDTDNSGAITFDELKAGLRRY--------GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 398 ~~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~--------~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
.+++++ ...++++|+.+| |++|.|+.+||..++..+ +..++..+++.+|..+|.+++|.|+|+||..++.
T Consensus 524 ~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~ 602 (714)
T 3bow_A 524 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 602 (714)
T ss_dssp CCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 367777 889999999999 999999999999999987 7789999999999999999999999999999886
Q ss_pred hhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCCh
Q 008475 469 HLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGR 546 (564)
Q Consensus 469 ~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~ 546 (564)
.. ..++.+|+.+|.|++|.|+.+||+.++..+| +++++++.+|..+| |+||.|+|+||+.++...
T Consensus 603 ~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~------ 669 (714)
T 3bow_A 603 KI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------ 669 (714)
T ss_dssp HH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHH------
T ss_pred HH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------
Confidence 43 5688999999999999999999999999988 89999999999999 999999999999999765
Q ss_pred HHHHHHHhHHccCCCCC
Q 008475 547 RTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 547 ~~~~~~f~~~D~~~~g~ 563 (564)
+.+.++|+.+|+|++|+
T Consensus 670 ~~l~~~F~~~D~d~dG~ 686 (714)
T 3bow_A 670 EILFKIFKQLDPENTGT 686 (714)
T ss_dssp HHHHHHHSSSCSSCCSE
T ss_pred HHHHHHHHHhCCCCCCc
Confidence 68999999999999994
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.7e-20 Score=172.63 Aligned_cols=146 Identities=21% Similarity=0.350 Sum_probs=124.5
Q ss_pred hhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHh-hCCCCCHHHHHHHHHhc---------CCCCCCccchhhhH
Q 008475 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR-YGSTLKDTEIRDLMDAA---------DVDNSGTIDYGEFI 464 (564)
Q Consensus 395 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~~~~~~~~~~~~~~~~~---------D~~~~g~I~~~eF~ 464 (564)
+...++++++..++++|..+|.|++|.|+.+||..++.. ++..++..++..++..+ |.+++|.|+|+||+
T Consensus 38 ~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~ 117 (219)
T 3cs1_A 38 IPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFL 117 (219)
T ss_dssp SCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHH
T ss_pred hcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHH
Confidence 345788999999999999999999999999999999987 78777666665544422 34889999999999
Q ss_pred HHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 465 AATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 465 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
..+...........+..+|+.+|.|++|+|+.+||+.++..+| +++++++.+|..+|.|+||.|+|+||+.++...
T Consensus 118 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 196 (219)
T 3cs1_A 118 EFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASAV 196 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred HHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 8865554445567899999999999999999999999998764 788889999999999999999999999999754
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=168.54 Aligned_cols=147 Identities=24% Similarity=0.358 Sum_probs=128.0
Q ss_pred HHHHhHhhhhhcccCC-CCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHH
Q 008475 402 EEIAGLKEMFKAMDTD-NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 480 (564)
Q Consensus 402 ~~~~~l~~~F~~~D~d-~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~ 480 (564)
-....++++|..+|.+ ++|.|+.+||..++..++.......++.+|..+|.+++|.|+|+||..++.........+.+.
T Consensus 19 ~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~ 98 (204)
T 1jba_A 19 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK 98 (204)
T ss_dssp HHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHH
Confidence 3445678899999999 899999999999999999888899999999999999999999999999887665555667899
Q ss_pred HHHHHhCCCCCCceeHHHHHHHHHhC----C---------------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 481 AAFQYFDKDGSGYITVDELQQACAEH----N---------------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 481 ~~F~~~D~d~dG~I~~~e~~~~l~~~----~---------------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
.+|+.+|.|++|.|+.+||..++..+ | .+++++..+|..+|.|+||.|+|+||+.++...
T Consensus 99 ~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~- 177 (204)
T 1jba_A 99 WTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRD- 177 (204)
T ss_dssp HHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTT-
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHcC-
Confidence 99999999999999999999998765 2 456789999999999999999999999999743
Q ss_pred CCCChHHHHHHHh
Q 008475 542 VGLGRRTMRNSLN 554 (564)
Q Consensus 542 ~~~~~~~~~~~f~ 554 (564)
..+.++|.
T Consensus 178 -----~~~~~~~~ 185 (204)
T 1jba_A 178 -----KWVMKMLQ 185 (204)
T ss_dssp -----TTHHHHHH
T ss_pred -----hHHHHHHH
Confidence 44555555
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.2e-19 Score=164.30 Aligned_cols=147 Identities=23% Similarity=0.370 Sum_probs=128.6
Q ss_pred hHhhhhhcccCC-CCCCCCHHHHHHHHHhhCCC-CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHH
Q 008475 406 GLKEMFKAMDTD-NSGAITFDELKAGLRRYGST-LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAF 483 (564)
Q Consensus 406 ~l~~~F~~~D~d-~~G~I~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F 483 (564)
.+.++|..+|.+ ++|.|+.+||..++..++.. ....++..+|..+|.+++|.|+++||..++.........+.+..+|
T Consensus 26 el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f 105 (190)
T 2l2e_A 26 ELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAF 105 (190)
T ss_dssp HHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 366778889999 89999999999999988643 5677899999999999999999999999887766556678899999
Q ss_pred HHhCCCCCCceeHHHHHHHHHhC--------------CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHH
Q 008475 484 QYFDKDGSGYITVDELQQACAEH--------------NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTM 549 (564)
Q Consensus 484 ~~~D~d~dG~I~~~e~~~~l~~~--------------~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~ 549 (564)
+.+|.|++|.|+.+||..++... ..+++++.++|..+|.|+||.|+|+||+.++... ..+
T Consensus 106 ~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~------~~~ 179 (190)
T 2l2e_A 106 QLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRD------PTI 179 (190)
T ss_dssp HHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTC------THH
T ss_pred hHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC------cHH
Confidence 99999999999999999998762 2578899999999999999999999999999865 567
Q ss_pred HHHHhHHcc
Q 008475 550 RNSLNMSMR 558 (564)
Q Consensus 550 ~~~f~~~D~ 558 (564)
.+.|..+|.
T Consensus 180 ~~~l~~~d~ 188 (190)
T 2l2e_A 180 VSALSLYDG 188 (190)
T ss_dssp HHHHHTTCS
T ss_pred HHHHHHHhc
Confidence 788888875
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=181.95 Aligned_cols=141 Identities=40% Similarity=0.705 Sum_probs=128.2
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhhHH
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLERE 476 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~~~ 476 (564)
.++++++..++++|+.+|.|++|.|+.+||..++..++..++..+++.+|..+|.+++|.|+|+||+.++.... .....
T Consensus 305 ~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~ 384 (450)
T 3sg6_A 305 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE 384 (450)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchh
Confidence 56778888999999999999999999999999999999999999999999999999999999999999886543 23346
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
+.+..+|+.+|.|++|.|+.+||+.+|..+| +++++++.+|..+|.|+||.|+|+||+.+|.
T Consensus 385 e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 385 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred hHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 7789999999999999999999999999877 8999999999999999999999999999885
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=158.70 Aligned_cols=131 Identities=25% Similarity=0.431 Sum_probs=117.8
Q ss_pred HHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh---hHHHHHH
Q 008475 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL---EREEHLV 480 (564)
Q Consensus 404 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~---~~~~~l~ 480 (564)
+.+++++|..+|.|++|.|+.+||..+++.++..++..++..++. +++|.|+|+||+..+...... .....+.
T Consensus 4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 79 (140)
T 1ggw_A 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFV 79 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHH
Confidence 456899999999999999999999999999999999999998887 889999999999988665322 2347789
Q ss_pred HHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 481 AAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 481 ~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
.+|+.+|.|++|.|+.+||+.++..+| +++++++.+|..+|. +||.|+|+||+.++.+
T Consensus 80 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 80 KGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 999999999999999999999998876 899999999999999 9999999999998864
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-19 Score=154.80 Aligned_cols=129 Identities=22% Similarity=0.422 Sum_probs=115.4
Q ss_pred HhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHh---hhchhhHHHHHHHHH
Q 008475 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV---HLNKLEREEHLVAAF 483 (564)
Q Consensus 407 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~---~~~~~~~~~~l~~~F 483 (564)
++++|..+|.+++|.|+.+||..++..++..++..++..+|..+|.+++|.|+++||..++. ..........+..+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999998874 222223445589999
Q ss_pred HHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 484 QYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 484 ~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
+.+|.|++|.|+.+||..++..+|... +.++|..+|.|+||.|+|+||++++
T Consensus 82 ~~~D~d~~G~i~~~e~~~~l~~~~~~~--~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 82 KLMDVDGDGKLTKEEVTSFFKKHGIEK--VAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTTTCHH--HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHCCCCCCccCHHHHHHHHHHhCHHH--HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 999999999999999999998877433 8999999999999999999999876
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.6e-19 Score=166.59 Aligned_cols=141 Identities=24% Similarity=0.413 Sum_probs=122.7
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh---
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL--- 473 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~--- 473 (564)
..++++++.+++++|..+|.|++|.|+.+||..++ .++..+.. +.+|..+|.+++|.|+|+||+..+......
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~ 96 (208)
T 2ct9_A 21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDN 96 (208)
T ss_dssp HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccch
Confidence 46888999999999999999999999999999975 66666654 567889999999999999999988754321
Q ss_pred -------------hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC-C--CCHHHHHHH----HHHhCCCCCcceeHHHH
Q 008475 474 -------------EREEHLVAAFQYFDKDGSGYITVDELQQACAEH-N--MTDVLLEDI----IREVDQDNDGRIDYGEF 533 (564)
Q Consensus 474 -------------~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~-~--~~~~~~~~~----~~~~d~d~dg~I~~~eF 533 (564)
...+.++.+|+.+|.|++|+|+.+||+.++..+ | +++++++.+ |..+|.|+||.|+|+||
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF 176 (208)
T 2ct9_A 97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176 (208)
T ss_dssp ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHH
T ss_pred hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 156789999999999999999999999999875 6 788888887 99999999999999999
Q ss_pred HHHHHcCC
Q 008475 534 VAMMQKGN 541 (564)
Q Consensus 534 ~~~~~~~~ 541 (564)
+.++...+
T Consensus 177 ~~~~~~~~ 184 (208)
T 2ct9_A 177 VKVLEKVD 184 (208)
T ss_dssp HHTTTTSC
T ss_pred HHHHhccC
Confidence 99987663
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=164.03 Aligned_cols=153 Identities=20% Similarity=0.328 Sum_probs=131.3
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCC-CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHH
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST-LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~ 476 (564)
.++.++++.+.+.|... +++|.|+.+||..++..++.. .+..++..+|..+|.+++|.|+|+||+.++.........
T Consensus 47 ~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~ 124 (224)
T 1s1e_A 47 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH 124 (224)
T ss_dssp SCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHH
T ss_pred CCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHH
Confidence 57778877777666654 589999999999999988754 789999999999999999999999999988776655667
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhC----C------CC----HHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEH----N------MT----DVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV 542 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~------~~----~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~ 542 (564)
+.+..+|+.+|.|++|.|+.+||..++..+ | ++ .+++.++|..+|.|+||.|+|+||+.++...
T Consensus 125 ~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~-- 202 (224)
T 1s1e_A 125 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED-- 202 (224)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTC--
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC--
Confidence 889999999999999999999999999764 4 22 4789999999999999999999999999765
Q ss_pred CCChHHHHHHHhHHcc
Q 008475 543 GLGRRTMRNSLNMSMR 558 (564)
Q Consensus 543 ~~~~~~~~~~f~~~D~ 558 (564)
..+.+.|..++.
T Consensus 203 ----~~l~~~l~~~~~ 214 (224)
T 1s1e_A 203 ----DNIMRSLQLFQN 214 (224)
T ss_dssp ----HHHHHHHHHHHH
T ss_pred ----HHHHHHhcCCCC
Confidence 567788877654
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=99.78 E-value=7.8e-19 Score=154.32 Aligned_cols=133 Identities=17% Similarity=0.314 Sum_probs=120.4
Q ss_pred hHHHHHhHhhhhhcccCCC-CCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh-chhhHHH
Q 008475 400 SEEEIAGLKEMFKAMDTDN-SGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL-NKLEREE 477 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~-~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-~~~~~~~ 477 (564)
..+++..++++|..+|.|+ +|.|+.+||..+++.+|..++..++..++..+|.+ |+|+||+..+... .......
T Consensus 9 ~~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~ 84 (146)
T 2qac_A 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVE 84 (146)
T ss_dssp HHHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHH
T ss_pred HHHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHH
Confidence 4456778999999999999 99999999999999999999999999999999877 9999999987643 3334567
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 478 HLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 478 ~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
.+..+|+.+|.|++|.|+.+||+.++..+| +++++++.+|..+ |+||.|+|+||+.+|.
T Consensus 85 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 85 ELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp HHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 799999999999999999999999999887 8999999999999 9999999999999874
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.2e-19 Score=164.82 Aligned_cols=155 Identities=19% Similarity=0.309 Sum_probs=130.7
Q ss_pred hhHHHHHhHhhhhhcccCC-CCCCCCHHHHHHHHHhhCCC-CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHH
Q 008475 399 LSEEEIAGLKEMFKAMDTD-NSGAITFDELKAGLRRYGST-LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d-~~G~I~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~ 476 (564)
++.++ +..+|..+|.+ ++|.|+.+||..++..++.. ....++..+|..+|.+++|.|+++||+.++.........
T Consensus 30 ~~~~~---i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~ 106 (207)
T 2d8n_A 30 FSEEE---LCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTN 106 (207)
T ss_dssp CCHHH---HHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSS
T ss_pred CCHHH---HHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHH
Confidence 45444 56677777878 79999999999999998764 778899999999999999999999999988766544556
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhC----C------CC------HHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEH----N------MT------DVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~------~~------~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
+.+..+|+.+|.|++|.|+.+||..++..+ | ++ ++++..+|..+|.|+||.|+|+||+.++...
T Consensus 107 ~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 186 (207)
T 2d8n_A 107 QKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLAN 186 (207)
T ss_dssp TTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhC
Confidence 678899999999999999999999999764 4 33 4679999999999999999999999999865
Q ss_pred CCCCChHHHHHHHhHHccCCCC
Q 008475 541 NVGLGRRTMRNSLNMSMRDAPG 562 (564)
Q Consensus 541 ~~~~~~~~~~~~f~~~D~~~~g 562 (564)
..+.++|..+|..-.+
T Consensus 187 ------~~~~~~~~~~~~~~~~ 202 (207)
T 2d8n_A 187 ------KEILRLIQFEPQKVKE 202 (207)
T ss_dssp ------HHHHHHHSCCCSSCCC
T ss_pred ------hHHHHHHhhhhHHHHH
Confidence 5678888888765544
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-18 Score=162.91 Aligned_cols=144 Identities=24% Similarity=0.440 Sum_probs=123.0
Q ss_pred hhhhHHHHHhHhhhhhcccCC--CCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hh
Q 008475 397 ESLSEEEIAGLKEMFKAMDTD--NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KL 473 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~ 473 (564)
..++.+++.+++++|..+|.| ++|.|+.+||..++.. ........+..+|..+|.+++|.|+|+||+.++.... ..
T Consensus 40 ~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~ 118 (226)
T 2zfd_A 40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNA 118 (226)
T ss_dssp SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTS
T ss_pred CCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCC
Confidence 368899999999999999999 9999999999999986 3333445677899999999999999999999887654 33
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHH----hCC--CCHHHHHH----HHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACA----EHN--MTDVLLED----IIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~----~~~--~~~~~~~~----~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
...+.+..+|+.+|.|++|.|+.+||..++. ..| ++++++++ +|..+|.|+||.|+|+||+.++...+
T Consensus 119 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~ 196 (226)
T 2zfd_A 119 PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHP 196 (226)
T ss_dssp CHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSG
T ss_pred CHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCh
Confidence 4577899999999999999999999999985 344 77777655 45699999999999999999998764
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=159.70 Aligned_cols=151 Identities=21% Similarity=0.338 Sum_probs=126.6
Q ss_pred hhhHHHHHhHhhhhhcccCC-CCCCCCHHHHHHHHHhh-CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhH
Q 008475 398 SLSEEEIAGLKEMFKAMDTD-NSGAITFDELKAGLRRY-GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d-~~G~I~~~el~~~l~~~-~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~ 475 (564)
.++.++ +.++|+.+|.+ ++|.|+.+||..++..+ +.......+..+|..+|.+++|.|+++||..++........
T Consensus 21 ~~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1g8i_A 21 YFTEKE---VQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTL 97 (190)
T ss_dssp SSCHHH---HHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCH
T ss_pred CCCHHH---HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCH
Confidence 455554 55666677777 89999999999999987 33456788999999999999999999999998876655566
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhC----C----------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEH----N----------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~----------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
.+.+..+|+.+|.|++|.|+.+||..++..+ | .+++++.++|..+|.|+||.|+++||+.++...
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~- 176 (190)
T 1g8i_A 98 DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD- 176 (190)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHC-
T ss_pred HHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhC-
Confidence 7889999999999999999999999998762 2 567889999999999999999999999999765
Q ss_pred CCCChHHHHHHHhHHc
Q 008475 542 VGLGRRTMRNSLNMSM 557 (564)
Q Consensus 542 ~~~~~~~~~~~f~~~D 557 (564)
..+.+.|..+|
T Consensus 177 -----~~~~~~~~~~~ 187 (190)
T 1g8i_A 177 -----PSIVQALSLYD 187 (190)
T ss_dssp -----HHHHHHHCCBT
T ss_pred -----hHHHHHHhhhc
Confidence 45667777665
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-18 Score=159.68 Aligned_cols=144 Identities=25% Similarity=0.476 Sum_probs=122.7
Q ss_pred hhhhHHHHHhHhhhhhcccCC--CCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch-h
Q 008475 397 ESLSEEEIAGLKEMFKAMDTD--NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK-L 473 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~-~ 473 (564)
..++++++..++++|..+|.| ++|.|+.+||..++.. ........+..+|..+|.+++|.|+|+||+..+..... .
T Consensus 29 ~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~ 107 (207)
T 2ehb_A 29 TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSA 107 (207)
T ss_dssp SSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTS
T ss_pred CCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCC
Confidence 368899999999999999999 9999999999999986 33334456788999999999999999999998876543 3
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHH----hCC--CCHHHHHH----HHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACA----EHN--MTDVLLED----IIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~----~~~--~~~~~~~~----~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
...+.+..+|+.+|.|++|.|+.+||..++. ..| ++++++++ +|..+|.|+||.|+|+||+.++...+
T Consensus 108 ~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 185 (207)
T 2ehb_A 108 PVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNP 185 (207)
T ss_dssp CHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCG
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCh
Confidence 4567899999999999999999999999985 334 77777654 55699999999999999999998753
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-18 Score=160.80 Aligned_cols=135 Identities=24% Similarity=0.368 Sum_probs=118.5
Q ss_pred HhHhhhhhcccCC-CCCCCCHHHHHHHHHhhCCCCCH-HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHH
Q 008475 405 AGLKEMFKAMDTD-NSGAITFDELKAGLRRYGSTLKD-TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAA 482 (564)
Q Consensus 405 ~~l~~~F~~~D~d-~~G~I~~~el~~~l~~~~~~~~~-~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~ 482 (564)
..++++|+.+|.+ ++|.|+.+||..+++.++..+.. ..+..+|..+|.+++|.|+|+||+.++..+........+..+
T Consensus 14 ~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~ 93 (198)
T 2r2i_A 14 TECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWY 93 (198)
T ss_dssp SCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHH
Confidence 3467888899988 89999999999999988876654 459999999999999999999999988776655667889999
Q ss_pred HHHhCCCCCCceeHHHHHHHHHhCC--------CCH-HHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 483 FQYFDKDGSGYITVDELQQACAEHN--------MTD-VLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 483 F~~~D~d~dG~I~~~e~~~~l~~~~--------~~~-~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
|+.+|.|++|.|+.+||..++..++ ++. +.+..+|..+|.|+||.|+|+||+.++..
T Consensus 94 F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 159 (198)
T 2r2i_A 94 FKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159 (198)
T ss_dssp HHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred HHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 9999999999999999999998753 344 45899999999999999999999999864
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.7e-18 Score=157.06 Aligned_cols=152 Identities=24% Similarity=0.355 Sum_probs=127.1
Q ss_pred hhhHHHHHhHhhhhhcccCC-CCCCCCHHHHHHHHHhhCC-CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhH
Q 008475 398 SLSEEEIAGLKEMFKAMDTD-NSGAITFDELKAGLRRYGS-TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d-~~G~I~~~el~~~l~~~~~-~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~ 475 (564)
.++.+++.. +|+.+|.+ ++|.|+.+||..++..++. ......+..+|..+|.+++|.|+++||..++........
T Consensus 21 ~~~~~~i~~---~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1fpw_A 21 YFDRREIQQ---WHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL 97 (190)
T ss_dssp CSTHHHHHH---HHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS
T ss_pred CCCHHHHHH---HHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCc
Confidence 466666554 45555555 8999999999999998753 345677999999999999999999999998876655555
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHh----CC----------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAE----HN----------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~----~~----------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
.+.+..+|+.+|.|++|.|+.+||..++.. .| .+++++..+|..+|.|+||.|+++||+.++...
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~- 176 (190)
T 1fpw_A 98 EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVD- 176 (190)
T ss_dssp THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSS-
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC-
Confidence 678899999999999999999999999976 23 557889999999999999999999999999865
Q ss_pred CCCChHHHHHHHhHHcc
Q 008475 542 VGLGRRTMRNSLNMSMR 558 (564)
Q Consensus 542 ~~~~~~~~~~~f~~~D~ 558 (564)
..+.+.|..+|.
T Consensus 177 -----~~~~~~~~~~d~ 188 (190)
T 1fpw_A 177 -----PSIIGALNLYDG 188 (190)
T ss_dssp -----TTHHHHHHHHHC
T ss_pred -----hHHHHHHhhccc
Confidence 467788888874
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.4e-19 Score=165.84 Aligned_cols=135 Identities=26% Similarity=0.413 Sum_probs=115.6
Q ss_pred hHhhhhhcccCC-CCCCCCHHHHHHHHHhhCCCCC-HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHH
Q 008475 406 GLKEMFKAMDTD-NSGAITFDELKAGLRRYGSTLK-DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAF 483 (564)
Q Consensus 406 ~l~~~F~~~D~d-~~G~I~~~el~~~l~~~~~~~~-~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F 483 (564)
.+.++|+.+|.+ ++|.|+.+||..++..++..+. ..+++.+|..+|.+++|.|+|+||+.++..+......+.+..+|
T Consensus 20 ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F 99 (211)
T 2ggz_A 20 ETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYF 99 (211)
T ss_dssp ----CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHH
Confidence 467889999988 8999999999999998887654 45589999999999999999999999887665556678899999
Q ss_pred HHhCCCCCCceeHHHHHHHHHhCC-------CCH-HHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 484 QYFDKDGSGYITVDELQQACAEHN-------MTD-VLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 484 ~~~D~d~dG~I~~~e~~~~l~~~~-------~~~-~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
+.+|.|++|.|+.+||..++..++ ++. +.+..+|..+|.|+||.|+|+||+.++...
T Consensus 100 ~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 164 (211)
T 2ggz_A 100 KLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKD 164 (211)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTT
T ss_pred HHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhC
Confidence 999999999999999999998653 344 458999999999999999999999999854
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4e-19 Score=163.01 Aligned_cols=143 Identities=13% Similarity=0.207 Sum_probs=122.5
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhh------CCCCCHHHHHHH---------HHhcCCCCCCccch
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY------GSTLKDTEIRDL---------MDAADVDNSGTIDY 460 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~------~~~~~~~~~~~~---------~~~~D~~~~g~I~~ 460 (564)
...++++++.+++++|..+|.|++|.|+.+||..+++.+ |..++..++..+ |..+|.+++|.|+|
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~ 84 (186)
T 2hps_A 5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVN 84 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHH
T ss_pred cccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccH
Confidence 456788999999999999999999999999999999876 777788888887 69999999999999
Q ss_pred hhhHHHHhhhch-hhHHHHHHHHH--HHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHH
Q 008475 461 GEFIAATVHLNK-LEREEHLVAAF--QYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVA 535 (564)
Q Consensus 461 ~eF~~~~~~~~~-~~~~~~l~~~F--~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~ 535 (564)
+| .++..... ......+..+| +.+|.|++|.|+.+||+.++..+| ++++++..+|..+|.|+||.|+|+||+.
T Consensus 85 ~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~ 162 (186)
T 2hps_A 85 AT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLV 162 (186)
T ss_dssp HH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred HH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHH
Confidence 99 44433322 22334455666 788999999999999999999887 8999999999999999999999999999
Q ss_pred HHHcC
Q 008475 536 MMQKG 540 (564)
Q Consensus 536 ~~~~~ 540 (564)
++...
T Consensus 163 ~~~~~ 167 (186)
T 2hps_A 163 TVNDF 167 (186)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-18 Score=156.19 Aligned_cols=143 Identities=17% Similarity=0.263 Sum_probs=119.6
Q ss_pred HHhhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcC---CCCCCccchhhhHHHHhh
Q 008475 393 RVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAAD---VDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 393 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D---~~~~g~I~~~eF~~~~~~ 469 (564)
..+....+.+++.++++.|..+| ++|.|+.+||..++ |..++...+..+|..+| .+++|.|+|+||..++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~ 90 (179)
T 3a8r_A 16 QFVTAKVGNDGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQ 90 (179)
T ss_dssp HHHHHHHCCCCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHH
T ss_pred HHHHhccchhhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHH
Confidence 33444434456778999999999 89999999999964 77778888899999887 467889999999988776
Q ss_pred hchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHH-hCC---C------CHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 470 LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACA-EHN---M------TDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 470 ~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~-~~~---~------~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
+........++.+|+.||.|++|+|+.+||+.++. .+| + ++++++++|..+|.|+||.|+|+||+.++..
T Consensus 91 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 170 (179)
T 3a8r_A 91 LTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ 170 (179)
T ss_dssp HHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred HcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 55445677899999999999999999999999998 665 3 6778999999999999999999999999875
Q ss_pred C
Q 008475 540 G 540 (564)
Q Consensus 540 ~ 540 (564)
.
T Consensus 171 ~ 171 (179)
T 3a8r_A 171 S 171 (179)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.8e-18 Score=156.13 Aligned_cols=140 Identities=17% Similarity=0.298 Sum_probs=121.3
Q ss_pred hhhhHHHHHhHhhhhhcccC-----CC-C--CCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCc-cchhhhHHHH
Q 008475 397 ESLSEEEIAGLKEMFKAMDT-----DN-S--GAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGT-IDYGEFIAAT 467 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~-----d~-~--G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~-I~~~eF~~~~ 467 (564)
..++++++..++++|..+|. |+ + |.|+.+||.. +..++..+... .+|..+|.+++|. |+|+||+.++
T Consensus 12 ~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~ 87 (183)
T 1dgu_A 12 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLL 87 (183)
T ss_dssp CSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHHH
Confidence 36788999999999999999 68 8 9999999999 98888887754 5778889999999 9999999988
Q ss_pred hhhchh-hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC-------CCHHHHHH----HHHHhCCCCCcceeHHHHHH
Q 008475 468 VHLNKL-EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN-------MTDVLLED----IIREVDQDNDGRIDYGEFVA 535 (564)
Q Consensus 468 ~~~~~~-~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~-------~~~~~~~~----~~~~~d~d~dg~I~~~eF~~ 535 (564)
...... .....+..+|+.+|.|++|.|+.+||+.++..++ ++++++.. +|..+|.|+||.|+|+||+.
T Consensus 88 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~ 167 (183)
T 1dgu_A 88 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 167 (183)
T ss_dssp HHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 765433 3456899999999999999999999999998753 45677765 99999999999999999999
Q ss_pred HHHcC
Q 008475 536 MMQKG 540 (564)
Q Consensus 536 ~~~~~ 540 (564)
++...
T Consensus 168 ~~~~~ 172 (183)
T 1dgu_A 168 VISRS 172 (183)
T ss_dssp HHCSS
T ss_pred HHHhC
Confidence 98754
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-18 Score=163.33 Aligned_cols=153 Identities=23% Similarity=0.321 Sum_probs=130.5
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhC-CCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHH
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~-~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~ 476 (564)
.++.+++..+.+.|.. .+++|.|+.+||..++..++ ......++..+|..+|.+++|.|+|+||..++..+......
T Consensus 87 ~~s~~ei~~l~~~fd~--~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~ 164 (256)
T 2jul_A 87 KFTKKELQSLYRGFKN--ECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVH 164 (256)
T ss_dssp TSCHHHHHHHHHHHHH--HCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHH
T ss_pred CCCHHHHHHHHHHHHh--hCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChH
Confidence 5777777777666653 24899999999999999886 56778899999999999999999999999988776555667
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhC----C----------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEH----N----------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV 542 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~----------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~ 542 (564)
+.+..+|+.+|.|++|.|+.+||..++..+ | ..+++++.+|..+|.|+||.|+|+||+.++...
T Consensus 165 ~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~-- 242 (256)
T 2jul_A 165 EKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKD-- 242 (256)
T ss_dssp HHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHC--
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhC--
Confidence 889999999999999999999999998764 3 267889999999999999999999999999864
Q ss_pred CCChHHHHHHHhHHcc
Q 008475 543 GLGRRTMRNSLNMSMR 558 (564)
Q Consensus 543 ~~~~~~~~~~f~~~D~ 558 (564)
..+.+.|..||.
T Consensus 243 ----~~l~~~l~~~d~ 254 (256)
T 2jul_A 243 ----ENIMNSMQLFEN 254 (256)
T ss_dssp ----SSHHHHHHHHHH
T ss_pred ----HHHHHHHHhhcc
Confidence 456777777763
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.5e-18 Score=161.49 Aligned_cols=140 Identities=17% Similarity=0.299 Sum_probs=121.1
Q ss_pred hhhhHHHHHhHhhhhhcccC-----CC-C--CCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCc-cchhhhHHHH
Q 008475 397 ESLSEEEIAGLKEMFKAMDT-----DN-S--GAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGT-IDYGEFIAAT 467 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~-----d~-~--G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~-I~~~eF~~~~ 467 (564)
..|+.++++.+.++|..+|. |+ + |.|+.+||.. +..++.++.. +.+|..+|.+++|. |+|+||+.++
T Consensus 43 t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~---~~lf~~~D~d~dG~~I~f~EF~~~~ 118 (214)
T 2l4h_A 43 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFK---ERICRVFSTSPAKDSLSFEDFLDLL 118 (214)
T ss_dssp CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTH---HHHHHHHCCSSSCCSEEHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHH---HHHHHHhCcCCCCCEecHHHHHHHH
Confidence 47899999999999999998 66 6 9999999999 8888887764 46788899999999 9999999988
Q ss_pred hhhchh-hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC-------CCCHHHHHH----HHHHhCCCCCcceeHHHHHH
Q 008475 468 VHLNKL-EREEHLVAAFQYFDKDGSGYITVDELQQACAEH-------NMTDVLLED----IIREVDQDNDGRIDYGEFVA 535 (564)
Q Consensus 468 ~~~~~~-~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~-------~~~~~~~~~----~~~~~d~d~dg~I~~~eF~~ 535 (564)
...... ..++.++.+|+.||.|++|+|+.+||+.++..+ .++++++++ +|..+|.|+||.|+|+||+.
T Consensus 119 ~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~ 198 (214)
T 2l4h_A 119 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 198 (214)
T ss_dssp HHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence 765433 346789999999999999999999999999764 366666664 99999999999999999999
Q ss_pred HHHcC
Q 008475 536 MMQKG 540 (564)
Q Consensus 536 ~~~~~ 540 (564)
++...
T Consensus 199 ~~~~~ 203 (214)
T 2l4h_A 199 VISRS 203 (214)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99765
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=156.35 Aligned_cols=149 Identities=17% Similarity=0.153 Sum_probs=129.9
Q ss_pred cccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC-CCCccchhhhHHHHhhhchh-hHHHHHHHHHHHhCCCC
Q 008475 413 AMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD-NSGTIDYGEFIAATVHLNKL-EREEHLVAAFQYFDKDG 490 (564)
Q Consensus 413 ~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~~~-~~~~~l~~~F~~~D~d~ 490 (564)
.++.+++|.|+.+|+..+++.++ ++..++..+|..+|.+ ++|.|+++||..++..+... .....+..+|+.+|.|+
T Consensus 7 ~mg~~~~g~l~~~el~~~~~~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~ 84 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQLNTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNL 84 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTC
T ss_pred hhccccCCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCC
Confidence 47899999999999999999877 5899999999999998 79999999999988765432 45677899999999999
Q ss_pred CCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC----C----CCCC------hHHHHHHHh
Q 008475 491 SGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG----N----VGLG------RRTMRNSLN 554 (564)
Q Consensus 491 dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~----~----~~~~------~~~~~~~f~ 554 (564)
+|.|+.+||..++..++ .+.+++..+|..+|.|++|.|+++||..++... + ..++ .+.+..+|+
T Consensus 85 ~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~ 164 (207)
T 2d8n_A 85 DGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWK 164 (207)
T ss_dssp CSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHH
T ss_pred CCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHH
Confidence 99999999999998765 677889999999999999999999999998864 3 3333 366899999
Q ss_pred HHccCCCCC
Q 008475 555 MSMRDAPGS 563 (564)
Q Consensus 555 ~~D~~~~g~ 563 (564)
.+|.|+||+
T Consensus 165 ~~D~d~dG~ 173 (207)
T 2d8n_A 165 YFGKNDDDK 173 (207)
T ss_dssp HTTCCTTCC
T ss_pred HcCCCCCCc
Confidence 999999995
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.73 E-value=7.2e-18 Score=169.73 Aligned_cols=142 Identities=18% Similarity=0.224 Sum_probs=101.3
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC--------------CH-Hh----HHHHHHHHHHHHhhcCCC
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI--------------SR-ED----VEDVRREIQIMHHLAGHK 160 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~--------------~~-~~----~~~~~~E~~~l~~l~~h~ 160 (564)
.|.++..||+|+||.||+|.+ .+|+.||||+++..... .. .. .-...+|...|.++. +.
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~-~~ 173 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY-EE 173 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred EEEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH-hc
Confidence 389999999999999999997 46999999987532110 00 00 112346788888885 44
Q ss_pred Cc--cEEEEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCC
Q 008475 161 NI--VTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDD 238 (564)
Q Consensus 161 ni--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~ 238 (564)
++ ...++. .. .+|||||++|++|..+. ....+..++.||+.+|.+||++|||||||||.|||+..+++
T Consensus 174 gv~vp~p~~~--~~--~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 174 GFPVPEPIAQ--SR--HTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp TCSCCCEEEE--ET--TEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEEC
T ss_pred CCCCCeeeec--cC--ceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCC
Confidence 43 233332 22 37999999998886532 22345678899999999999999999999999999954321
Q ss_pred C-------CcEEEeeCCCcccc
Q 008475 239 D-------FSLKAIDFGLSVFF 253 (564)
Q Consensus 239 ~-------~~~kl~DfG~~~~~ 253 (564)
. ..+.|+||+-+...
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 0 13899999987653
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-17 Score=189.46 Aligned_cols=151 Identities=23% Similarity=0.326 Sum_probs=124.8
Q ss_pred hhHHH-HHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCC--------CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 399 LSEEE-IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGS--------TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 399 ~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~--------~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
+++++ .++++++|..+| +++|.|+.+||..+|..++. .++..+++.+|..+|.+++|.|+|+||+.++..
T Consensus 527 l~~~e~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~ 605 (900)
T 1qxp_A 527 LSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNR 605 (900)
T ss_dssp --------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 44444 778999999999 99999999999999998764 789999999999999999999999999998765
Q ss_pred hchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChH
Q 008475 470 LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRR 547 (564)
Q Consensus 470 ~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~ 547 (564)
. ..+..+|+.+|.|++|.|+.+||+.++..+| +++++++.++..+| |+||.|+|+||+.++... +
T Consensus 606 ~------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~------~ 672 (900)
T 1qxp_A 606 I------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------E 672 (900)
T ss_dssp H------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH------H
T ss_pred H------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------H
Confidence 3 5688999999999999999999999999988 89999999999999 999999999999999765 7
Q ss_pred HHHHHHhHHccCCCCC
Q 008475 548 TMRNSLNMSMRDAPGS 563 (564)
Q Consensus 548 ~~~~~f~~~D~~~~g~ 563 (564)
.+.++|+.+|.+++|+
T Consensus 673 ~l~~~F~~~D~d~~G~ 688 (900)
T 1qxp_A 673 ILFKIFKQLDPENTGT 688 (900)
T ss_dssp HHHHHHHHSCSSCCSC
T ss_pred HHHHHHHhhCCCCCce
Confidence 7899999999999995
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-17 Score=165.31 Aligned_cols=131 Identities=24% Similarity=0.401 Sum_probs=119.9
Q ss_pred HHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHH-HHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHH
Q 008475 402 EEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 480 (564)
Q Consensus 402 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~-~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~ 480 (564)
.....+..+|..+|.|++|+|+.+||..++ ++..++..++.. +|..+|.+++|.|+|+||+.++.... .+.
T Consensus 185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~ 256 (323)
T 1ij5_A 185 NDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLR 256 (323)
T ss_dssp HHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHH
T ss_pred hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHH
Confidence 455678999999999999999999999999 788888999999 99999999999999999998876543 688
Q ss_pred HHHHHhCCCCCCceeHHHHHHHH-HhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 481 AAFQYFDKDGSGYITVDELQQAC-AEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 481 ~~F~~~D~d~dG~I~~~e~~~~l-~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+|+.+|.|++|.|+.+||..++ ..+| ++++++..+|..+|.|+||.|+|+||+.++...
T Consensus 257 ~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~~ 319 (323)
T 1ij5_A 257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLM 319 (323)
T ss_dssp HHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence 99999999999999999999999 8888 788899999999999999999999999988643
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.71 E-value=3.5e-17 Score=159.54 Aligned_cols=137 Identities=18% Similarity=0.344 Sum_probs=118.2
Q ss_pred HHhHhhhhhcccCCCCCCCCHHHHHHHHHhh----CCCCCHHHHHH----HHHhcCCCCCCccchhhhHHHHhh------
Q 008475 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRY----GSTLKDTEIRD----LMDAADVDNSGTIDYGEFIAATVH------ 469 (564)
Q Consensus 404 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~----~~~~~~~~~~~----~~~~~D~~~~g~I~~~eF~~~~~~------ 469 (564)
...++.+|..+|.|++|.|+.+||..++..+ +..++..++.. +|..+|.+++|.|+|+||...+..
T Consensus 103 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~ 182 (272)
T 2be4_A 103 SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLL 182 (272)
T ss_dssp HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSST
T ss_pred HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHh
Confidence 3458899999999999999999999999987 88888887754 999999999999999999887643
Q ss_pred ------hchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC------CCCHHHHHH----HHHHhCCCCCcceeHHHH
Q 008475 470 ------LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH------NMTDVLLED----IIREVDQDNDGRIDYGEF 533 (564)
Q Consensus 470 ------~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~------~~~~~~~~~----~~~~~d~d~dg~I~~~eF 533 (564)
.........+..+|+.+|.|++|.|+.+||+.++..+ .+++++++. +|..+|.|+||.|+|+||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF 262 (272)
T 2be4_A 183 QFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSEL 262 (272)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHH
T ss_pred hhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 1222446778999999999999999999999999764 378888877 999999999999999999
Q ss_pred HHHHHcC
Q 008475 534 VAMMQKG 540 (564)
Q Consensus 534 ~~~~~~~ 540 (564)
+.++...
T Consensus 263 ~~~~~~~ 269 (272)
T 2be4_A 263 ALCLGLK 269 (272)
T ss_dssp HHHTTCC
T ss_pred HHHHccC
Confidence 9988654
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.6e-16 Score=143.70 Aligned_cols=145 Identities=20% Similarity=0.265 Sum_probs=125.9
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC-CCCccchhhhHHHHhhhch-hhHHHHHHHHHHHhCCCCCCce
Q 008475 417 DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD-NSGTIDYGEFIAATVHLNK-LEREEHLVAAFQYFDKDGSGYI 494 (564)
Q Consensus 417 d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~~-~~~~~~l~~~F~~~D~d~dG~I 494 (564)
+.+|.|+.+++..+.+.++ ++..+++.+|..+|.+ ++|.|+++||..++..+.. ......+..+|+.+|.|++|.|
T Consensus 3 ~~~~~l~~~el~~~~~~~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 80 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRSTR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYI 80 (190)
T ss_dssp CSSCCSCHHHHHHHHHHHC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCE
T ss_pred cccccCCHHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeE
Confidence 4678999999999998865 4788999999999999 8999999999998876532 2456678899999999999999
Q ss_pred eHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC------------CCCCChHHHHHHHhHHccCC
Q 008475 495 TVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG------------NVGLGRRTMRNSLNMSMRDA 560 (564)
Q Consensus 495 ~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~------------~~~~~~~~~~~~f~~~D~~~ 560 (564)
+.+||..++...+ .+.+++..+|..+|.|++|.|+++||..++... ....+.+.+.++|+.+|.|+
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~ 160 (190)
T 2l2e_A 81 DFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNK 160 (190)
T ss_dssp EHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCS
T ss_pred eHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCC
Confidence 9999999998765 678899999999999999999999999988762 22356788999999999999
Q ss_pred CCC
Q 008475 561 PGS 563 (564)
Q Consensus 561 ~g~ 563 (564)
||+
T Consensus 161 dG~ 163 (190)
T 2l2e_A 161 DGQ 163 (190)
T ss_dssp SCC
T ss_pred CCc
Confidence 995
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.4e-16 Score=151.72 Aligned_cols=159 Identities=20% Similarity=0.211 Sum_probs=131.7
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhh---------CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh----c
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRY---------GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL----N 471 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~---------~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~----~ 471 (564)
..+..+|..+|.+++|.|+.+||..++... .......++..+|..+|.+++|.|+.+||..++..+ .
T Consensus 58 ~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g 137 (263)
T 2f33_A 58 PEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKAN 137 (263)
T ss_dssp HHHHHHHHHHTTGGGCCBCHHHHHHHTTSCTTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHhhhhhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcC
Confidence 456788899999999999999999987543 345568889999999999999999999999887654 2
Q ss_pred hhhHHHHH----HHHHHHhCCCCCCceeHHHHHHHHHh----------CCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 472 KLEREEHL----VAAFQYFDKDGSGYITVDELQQACAE----------HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 472 ~~~~~~~l----~~~F~~~D~d~dG~I~~~e~~~~l~~----------~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
.......+ ..+|+.+|.+++|.|+.+||..++.. .....+.+..+|..+|.|++|.|+.+||..++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l 217 (263)
T 2f33_A 138 KTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALL 217 (263)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHH
Confidence 22223333 44999999999999999999988743 23567889999999999999999999999999
Q ss_pred HcCCC----CCChHHHHHHHhH-HccCCCCC
Q 008475 538 QKGNV----GLGRRTMRNSLNM-SMRDAPGS 563 (564)
Q Consensus 538 ~~~~~----~~~~~~~~~~f~~-~D~~~~g~ 563 (564)
...+. .++.+++..+++. +|.|+||.
T Consensus 218 ~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~ 248 (263)
T 2f33_A 218 KDLCEKNKQELDINNISTYKKNIMALSDGGK 248 (263)
T ss_dssp HHHHHHCTTTCCTTTHHHHHHHHHTTSBTTE
T ss_pred HHHHHhcCCCCCHHHHHHHHHHhhccCCCCe
Confidence 87655 6788888899987 79999994
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.64 E-value=8.6e-16 Score=141.13 Aligned_cols=145 Identities=17% Similarity=0.248 Sum_probs=122.5
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC-CCCccchhhhHHHHhhhch-hhHHHHHHHHHHHhCCCCCCce
Q 008475 417 DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD-NSGTIDYGEFIAATVHLNK-LEREEHLVAAFQYFDKDGSGYI 494 (564)
Q Consensus 417 d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~~-~~~~~~l~~~F~~~D~d~dG~I 494 (564)
++.+.|+.+++..+.+.. .++.+++..+|..+|.+ ++|.|+++||..++..+.. ......+..+|+.+|.|++|.|
T Consensus 3 ~~~~~l~~~~l~~l~~~~--~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 80 (190)
T 1fpw_A 3 AKTSKLSKDDLTCLKQST--YFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFI 80 (190)
T ss_dssp CCSCCSTTHHHHHHTTTC--CSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEE
T ss_pred cccCCCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcE
Confidence 456789999999887653 56899999999999987 8999999999998876532 1234568899999999999999
Q ss_pred eHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC----C--------CCCChHHHHHHHhHHccCC
Q 008475 495 TVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG----N--------VGLGRRTMRNSLNMSMRDA 560 (564)
Q Consensus 495 ~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~----~--------~~~~~~~~~~~f~~~D~~~ 560 (564)
+.+||..++...+ .+.+++..+|..+|.|++|.|+++||..++... + ...+.+.+.++|+.+|.|+
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~ 160 (190)
T 1fpw_A 81 HFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNE 160 (190)
T ss_dssp CHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTC
T ss_pred eHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCC
Confidence 9999999998765 678899999999999999999999999998762 2 1245678999999999999
Q ss_pred CCC
Q 008475 561 PGS 563 (564)
Q Consensus 561 ~g~ 563 (564)
||+
T Consensus 161 dG~ 163 (190)
T 1fpw_A 161 DGY 163 (190)
T ss_dssp SSE
T ss_pred CCc
Confidence 994
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.61 E-value=2.7e-15 Score=136.99 Aligned_cols=140 Identities=14% Similarity=0.126 Sum_probs=113.7
Q ss_pred CCHHHHHHHHHhhCCCCCHHHHHHHHHhcCC-CCCCccchhhhHHHHhhhchh-hHHHHHHHHHHHhCCCCCCceeHHHH
Q 008475 422 ITFDELKAGLRRYGSTLKDTEIRDLMDAADV-DNSGTIDYGEFIAATVHLNKL-EREEHLVAAFQYFDKDGSGYITVDEL 499 (564)
Q Consensus 422 I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~-~~~g~I~~~eF~~~~~~~~~~-~~~~~l~~~F~~~D~d~dG~I~~~e~ 499 (564)
++.+|+..+.+..+ ++..++..++..+|. +++|.|+++||..++..+... .....+..+|+.+|.|++|.|+.+||
T Consensus 1 l~~~el~~l~~~~~--~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef 78 (183)
T 1s6c_A 1 HRPEGLEQLEAQTN--FTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF 78 (183)
T ss_dssp -----CHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred CChHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHH
Confidence 35667777777554 478899999999988 899999999999988766543 45778899999999999999999999
Q ss_pred HHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC----CCC----C----ChHHHHHHHhHHccCCCCC
Q 008475 500 QQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG----NVG----L----GRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 500 ~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~----~~~----~----~~~~~~~~f~~~D~~~~g~ 563 (564)
..++...+ ...+++..+|..+|.|++|.|+++||..++... +.. + ..+.+.++|+.+|.||||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~ 156 (183)
T 1s6c_A 79 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 156 (183)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCc
Confidence 99987653 667889999999999999999999999998764 221 2 3478999999999999994
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.61 E-value=3.4e-15 Score=130.54 Aligned_cols=123 Identities=22% Similarity=0.349 Sum_probs=109.1
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~ 517 (564)
.+++.+|..+|.+++|.|+.+||..++..+........+..+|+.+|.+++|.|+++||..++...- -+.+++..+|
T Consensus 6 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 85 (143)
T 2obh_A 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAF 85 (143)
T ss_dssp HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHH
Confidence 5678899999999999999999999887776656677889999999999999999999998875421 1346788999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++...+..++.+++.++|+.+|.||||.
T Consensus 86 ~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~ 131 (143)
T 2obh_A 86 KLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGE 131 (143)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSS
T ss_pred HHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999888889999999999999999995
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.61 E-value=3.5e-15 Score=136.99 Aligned_cols=144 Identities=19% Similarity=0.234 Sum_probs=120.9
Q ss_pred CCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC-CCCccchhhhHHHHhhhch-hhHHHHHHHHHHHhCCCCCCcee
Q 008475 418 NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD-NSGTIDYGEFIAATVHLNK-LEREEHLVAAFQYFDKDGSGYIT 495 (564)
Q Consensus 418 ~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~~-~~~~~~l~~~F~~~D~d~dG~I~ 495 (564)
..+.++.+++..+.... .++..+++.+|..+|.+ ++|.|+++||..++..+.. ......+..+|+.+|.|++|.|+
T Consensus 4 ~~~~l~~~~l~~l~~~~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~ 81 (190)
T 1g8i_A 4 SNSKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIE 81 (190)
T ss_dssp CCCSCCHHHHHHHHHTS--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEE
T ss_pred ccccCCHHHHHHHHHcc--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEe
Confidence 45578889988888754 45789999999999988 8999999999998776521 23345689999999999999999
Q ss_pred HHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC------------CCCCChHHHHHHHhHHccCCC
Q 008475 496 VDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG------------NVGLGRRTMRNSLNMSMRDAP 561 (564)
Q Consensus 496 ~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~------------~~~~~~~~~~~~f~~~D~~~~ 561 (564)
.+||..++...+ .+.+++..+|..+|.|++|.|+++||..++... +...+.+.+.++|+.+|.|+|
T Consensus 82 ~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~d 161 (190)
T 1g8i_A 82 FSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNAD 161 (190)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCS
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCC
Confidence 999999987654 567889999999999999999999999998762 223566789999999999999
Q ss_pred CC
Q 008475 562 GS 563 (564)
Q Consensus 562 g~ 563 (564)
|+
T Consensus 162 G~ 163 (190)
T 1g8i_A 162 GK 163 (190)
T ss_dssp SE
T ss_pred Cc
Confidence 94
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-15 Score=125.94 Aligned_cols=101 Identities=21% Similarity=0.397 Sum_probs=90.9
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---C--C
Q 008475 434 YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---N--M 508 (564)
Q Consensus 434 ~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~--~ 508 (564)
++..+++.+++.+|..+| ++|.|+|+||+.++.. .....+.+..+|+.+|.|++|.|+.+||+.++..+ | +
T Consensus 3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~ 78 (109)
T 3fs7_A 3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVL 78 (109)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCC
T ss_pred ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccC
Confidence 567789999999999998 7999999999998764 23456779999999999999999999999999887 5 7
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 509 TDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 509 ~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
++++++.+|..+|.|+||.|+|+||+.++.
T Consensus 79 ~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 79 TSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 899999999999999999999999999874
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.61 E-value=3.5e-15 Score=123.85 Aligned_cols=102 Identities=25% Similarity=0.437 Sum_probs=91.3
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---C--
Q 008475 433 RYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---N-- 507 (564)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~-- 507 (564)
.+|.+++..+++.++..+| ++|.|+|+||+.++... ......++.+|+.+|.|++|.|+.+||+.++..+ |
T Consensus 2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 77 (109)
T 1bu3_A 2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARA 77 (109)
T ss_dssp CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCC
T ss_pred cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCC
Confidence 4688899999999999998 88999999999877432 2346779999999999999999999999999877 5
Q ss_pred CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 508 MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 508 ~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
+++++++.+|..+|.|+||.|+|+||+.++.
T Consensus 78 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 78 LTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 8899999999999999999999999999874
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.61 E-value=9.8e-16 Score=173.75 Aligned_cols=146 Identities=18% Similarity=0.303 Sum_probs=117.5
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHH
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQ 484 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~ 484 (564)
..++.+|+.+|.|++|.|+.+||..++..++..++..+++.++..+| +++|.|+|+||+..+... ..+..+|+
T Consensus 607 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~------~~l~~~F~ 679 (900)
T 1qxp_A 607 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------EILFKIFK 679 (900)
T ss_dssp HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------HHHHHHHH
Confidence 67899999999999999999999999999999999999999999999 999999999998876532 23344455
Q ss_pred HhCCCCC----------------------------------------------------------CceeHHHHHHHHHhC
Q 008475 485 YFDKDGS----------------------------------------------------------GYITVDELQQACAEH 506 (564)
Q Consensus 485 ~~D~d~d----------------------------------------------------------G~I~~~e~~~~l~~~ 506 (564)
.+|.+++ |.|+.+||++++...
T Consensus 680 ~~D~d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~G~Is~~El~~~L~~~ 759 (900)
T 1qxp_A 680 QLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATELMNILNKV 759 (900)
T ss_dssp HSCSSCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTCSSCBCHHHHTTTSCC-
T ss_pred hhCCCCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHh
Confidence 5555554 555778887777553
Q ss_pred ----------CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 507 ----------NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 507 ----------~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+++.++++.+++.+|.|+||.|+|+||+.++... ..+..+|+.+|.|++|+
T Consensus 760 ~~~~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~~------~~l~~~F~~~D~d~dG~ 820 (900)
T 1qxp_A 760 VTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQGIYKRFETDRSGT 820 (900)
T ss_dssp ---CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHHH------HHHSSCC----CCSCC-
T ss_pred cccccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHHH------HHHHHHHHHhCCCCCCc
Confidence 3567899999999999999999999999998754 46788899999999995
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=99.60 E-value=5.6e-16 Score=166.63 Aligned_cols=132 Identities=14% Similarity=0.221 Sum_probs=65.0
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHH
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQ 484 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~ 484 (564)
..++++|+.+|.|++|.|+.+||..+++.++..++.++++.+|..+|.+++|.|+|+||+.++..+.. .+.+..+|+
T Consensus 11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~---~~el~~aF~ 87 (624)
T 1djx_A 11 HWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ---RAEIDRAFE 87 (624)
T ss_dssp ---------------------------------------------------------CTTHHHHHHTC---CHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---HHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999988865432 356899999
Q ss_pred HhCCCCCCceeHHHHHHHHHhC-C---CCHHHHHHHHHHhCCC----CCcceeHHHHHHHHHcC
Q 008475 485 YFDKDGSGYITVDELQQACAEH-N---MTDVLLEDIIREVDQD----NDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 485 ~~D~d~dG~I~~~e~~~~l~~~-~---~~~~~~~~~~~~~d~d----~dg~I~~~eF~~~~~~~ 540 (564)
.||.+ +|+|+.+||+++|... | +++++++++++++|.| ++|.|+|+||+.+|...
T Consensus 88 ~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~ 150 (624)
T 1djx_A 88 EAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA 150 (624)
T ss_dssp HHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHST
T ss_pred HhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCc
Confidence 99985 9999999999999864 3 7899999999999998 79999999999999864
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.60 E-value=4.1e-15 Score=123.43 Aligned_cols=102 Identities=26% Similarity=0.430 Sum_probs=90.7
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---C--C
Q 008475 434 YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---N--M 508 (564)
Q Consensus 434 ~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~--~ 508 (564)
++..++.++++.++..+|. +|.|+|+||+.++... ....+.+..+|+.+|.|++|.|+.+||+.++..+ | +
T Consensus 2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~ 77 (109)
T 5pal_A 2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77 (109)
T ss_dssp GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhhc--cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCC
Confidence 4567889999999999987 8999999999987542 3456779999999999999999999999999876 5 7
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 509 TDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 509 ~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
++++++.+|..+|.|+||.|+|+||+.++.+
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 78 NDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 8999999999999999999999999998864
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.60 E-value=3.2e-15 Score=123.84 Aligned_cols=101 Identities=28% Similarity=0.435 Sum_probs=90.4
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---C--
Q 008475 433 RYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---N-- 507 (564)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~-- 507 (564)
.+|. ++..+++.+|..+| ++|.|+|+||+.++... ......++.+|+.+|.|++|.|+.+||..++..+ |
T Consensus 2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 2pvb_A 2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARA 76 (108)
T ss_dssp CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCC
T ss_pred CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCC
Confidence 4677 89999999999998 78999999999887432 3346779999999999999999999999999887 5
Q ss_pred CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 508 MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 508 ~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
+++++++.+|..+|.|+||.|+|+||+.++.
T Consensus 77 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 77 LTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 8899999999999999999999999999875
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.3e-15 Score=141.19 Aligned_cols=144 Identities=13% Similarity=0.116 Sum_probs=116.5
Q ss_pred CCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC-CCCccchhhhHHHHhhhchh-hHHHHHHHHHHHhCCCCCCcee
Q 008475 418 NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD-NSGTIDYGEFIAATVHLNKL-EREEHLVAAFQYFDKDGSGYIT 495 (564)
Q Consensus 418 ~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~~~-~~~~~l~~~F~~~D~d~dG~I~ 495 (564)
..+.++.+++..+.+..+ ++..+++.+|..+|.+ ++|.|+++||..++..+... .....+..+|+.+|.|++|.|+
T Consensus 30 ~~~~l~~~~l~~l~~~~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~ 107 (224)
T 1s1e_A 30 TMVCHRPEGLEQLEAQTN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVK 107 (224)
T ss_dssp --------CHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBC
T ss_pred CccCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEe
Confidence 357889999999888765 6899999999999884 99999999999988766443 4567788999999999999999
Q ss_pred HHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC----CC--------CCChHHHHHHHhHHccCCC
Q 008475 496 VDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG----NV--------GLGRRTMRNSLNMSMRDAP 561 (564)
Q Consensus 496 ~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~----~~--------~~~~~~~~~~f~~~D~~~~ 561 (564)
.+||..++...+ ...+++..+|..+|.|++|.|+++||..++... +. ....+.+.++|+.+|.|+|
T Consensus 108 ~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~d 187 (224)
T 1s1e_A 108 FEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD 187 (224)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCS
T ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCC
Confidence 999999987653 667889999999999999999999999998764 22 1234789999999999999
Q ss_pred CC
Q 008475 562 GS 563 (564)
Q Consensus 562 g~ 563 (564)
|+
T Consensus 188 G~ 189 (224)
T 1s1e_A 188 GI 189 (224)
T ss_dssp SC
T ss_pred Cc
Confidence 95
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.60 E-value=6.5e-15 Score=129.56 Aligned_cols=123 Identities=18% Similarity=0.209 Sum_probs=111.2
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~ 517 (564)
++++.+|..+|.+++|.|+++||..++..+........+..+|..+|.+++|.|+..||..++... ....+++..+|
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF 89 (148)
T 2lmt_A 10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAF 89 (148)
T ss_dssp HHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHH
Confidence 456789999999999999999999888777666677888999999999999999999999887653 25678899999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++...+..++...+.++|+.+|.||||.
T Consensus 90 ~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~ 135 (148)
T 2lmt_A 90 KIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGM 135 (148)
T ss_dssp HHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSS
T ss_pred HHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCe
Confidence 9999999999999999999999988999999999999999999995
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.59 E-value=3.6e-15 Score=123.78 Aligned_cols=102 Identities=22% Similarity=0.358 Sum_probs=90.0
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---C--C
Q 008475 434 YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---N--M 508 (564)
Q Consensus 434 ~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~--~ 508 (564)
+|..++..+++.++..+| ++|.|+|+||+..+... ......++.+|+.+|.|++|.|+.+||+.++..+ | +
T Consensus 2 lg~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (109)
T 1rwy_A 2 MTDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL 77 (109)
T ss_dssp HHHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred CCCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCC
Confidence 455678899999999998 88999999999887432 3456788999999999999999999999999876 4 8
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 509 TDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 509 ~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
++++++.+|..+|.|+||.|+|+||+.++..
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 78 SAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 8999999999999999999999999998864
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.59 E-value=9.6e-15 Score=134.43 Aligned_cols=145 Identities=17% Similarity=0.227 Sum_probs=119.3
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC-CCCccchhhhHHHHhhhchh-hHHHHHHHHHHHhCCCCCCce
Q 008475 417 DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD-NSGTIDYGEFIAATVHLNKL-EREEHLVAAFQYFDKDGSGYI 494 (564)
Q Consensus 417 d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~~~-~~~~~l~~~F~~~D~d~dG~I 494 (564)
+..+.++..++..+... ..++..++..+|..+|.+ ++|.|+++||..++..+... .....+..+|+.+|.|++|.|
T Consensus 3 ~~~s~l~~~~l~~l~~~--~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i 80 (193)
T 1bjf_A 3 KQNSKLRPEVMQDLLES--TDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTI 80 (193)
T ss_dssp --CCCCCHHHHHHHHHH--SSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEE
T ss_pred cccccCCHHHHHHHHHH--cCCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcC
Confidence 35668999999987665 356889999999999988 89999999999988765432 235668899999999999999
Q ss_pred eHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC----C--CCCC------hHHHHHHHhHHccCC
Q 008475 495 TVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG----N--VGLG------RRTMRNSLNMSMRDA 560 (564)
Q Consensus 495 ~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~----~--~~~~------~~~~~~~f~~~D~~~ 560 (564)
+.+||..++...+ .+.+++..+|..+|.|++|.|+++||..++... + ..++ ...+.++|+.+|.|+
T Consensus 81 ~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~ 160 (193)
T 1bjf_A 81 DFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNR 160 (193)
T ss_dssp EHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTC
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCC
Confidence 9999999997764 567889999999999999999999999998752 2 1232 345899999999999
Q ss_pred CCC
Q 008475 561 PGS 563 (564)
Q Consensus 561 ~g~ 563 (564)
||+
T Consensus 161 dG~ 163 (193)
T 1bjf_A 161 DGK 163 (193)
T ss_dssp SSE
T ss_pred CCe
Confidence 994
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.7e-14 Score=124.35 Aligned_cols=122 Identities=15% Similarity=0.221 Sum_probs=109.7
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~ 517 (564)
.++..+|..+|.+++|.|+++||..++..+........+..+|+.+|.+++|.|+.+||..++... ....+.+..+|
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 85 (142)
T 2bl0_C 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAF 85 (142)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 457889999999999999999999988766655667788999999999999999999999998752 25678899999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++...+..++.+.+..+|+.+| |+||.
T Consensus 86 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~ 130 (142)
T 2bl0_C 86 RTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQ 130 (142)
T ss_dssp HHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSE
T ss_pred HHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCc
Confidence 9999999999999999999999888889999999999999 99994
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.7e-15 Score=123.88 Aligned_cols=103 Identities=25% Similarity=0.436 Sum_probs=91.2
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---C--
Q 008475 433 RYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---N-- 507 (564)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~-- 507 (564)
.+|..++..+++.++..+| ++|.|+|+||+.++.. .......++.+|+.+|.|++|.|+.+||+.++..+ |
T Consensus 2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 77 (110)
T 1pva_A 2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRD 77 (110)
T ss_dssp CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCC
T ss_pred cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCC
Confidence 4667788999999999998 8899999999988742 22346778999999999999999999999999887 5
Q ss_pred CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 508 MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 508 ~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
+++++++.+|..+|.|+||.|+|+||+.++.+
T Consensus 78 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 78 LTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 78999999999999999999999999998863
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.57 E-value=6.6e-15 Score=121.96 Aligned_cols=101 Identities=22% Similarity=0.389 Sum_probs=89.5
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---C--C
Q 008475 434 YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---N--M 508 (564)
Q Consensus 434 ~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~--~ 508 (564)
++..+++++++.+|..+| ++|.|+|+||+.++... ......++.+|+.+|.|++|.|+.+||+.++..+ | +
T Consensus 2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 1rro_A 2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhcC--cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCC
Confidence 466788999999999998 88999999999887422 2346778999999999999999999999999887 4 7
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 509 TDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 509 ~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
++++++.+|..+|.|+||.|+|+||+.++.
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 78 TESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 899999999999999999999999999874
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.57 E-value=2e-14 Score=131.98 Aligned_cols=129 Identities=19% Similarity=0.319 Sum_probs=111.5
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh-----------chhhHHHHHHHHHHHhCCCCCCceeHHHHHH
Q 008475 433 RYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL-----------NKLEREEHLVAAFQYFDKDGSGYITVDELQQ 501 (564)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-----------~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~ 501 (564)
.+.......++..+|..+|.+++|.|+++||..++..+ ........+..+|+.+|.|++|.|+.+||..
T Consensus 32 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~ 111 (191)
T 3khe_A 32 KLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVT 111 (191)
T ss_dssp HSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence 33344456778999999999999999999999887765 4445677899999999999999999999999
Q ss_pred HHHhC--CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 502 ACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 502 ~l~~~--~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
++... ....+.+..+|..+|.|++|.|+++||..++. +..++.+.+..+|+.+|.|+||.
T Consensus 112 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~dg~ 173 (191)
T 3khe_A 112 VCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGE 173 (191)
T ss_dssp HHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCSSS
T ss_pred HHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCCCC
Confidence 88543 26778899999999999999999999999998 66778999999999999999995
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.2e-14 Score=132.00 Aligned_cols=123 Identities=20% Similarity=0.314 Sum_probs=109.0
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQY 485 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~ 485 (564)
.+..+|..+|.|++|.|+.+||..++... ..+..+|..+|.+++|.|+.+||..++..+........+..+|+.
T Consensus 64 ~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~ 137 (191)
T 1y1x_A 64 TTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK 137 (191)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 45667889999999999999999998753 678999999999999999999999988776555567788999999
Q ss_pred hCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcc--eeHHHHHHHHH
Q 008475 486 FDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGR--IDYGEFVAMMQ 538 (564)
Q Consensus 486 ~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~--I~~~eF~~~~~ 538 (564)
+|.|++|.|+.+||..++.. ...+.++|..+|.|++|. |+++||+.++.
T Consensus 138 ~D~d~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~ 188 (191)
T 1y1x_A 138 FDRQRRGSLGFDDYVELSIF----VCRVRNVFAFYDRERTGQVTFTFDTFIGGSV 188 (191)
T ss_dssp HCTTCSSSBCHHHHHHHHHH----HHHHHHHHHHHCTTCCSEEEEEHHHHHHHHH
T ss_pred hCCCCCCeEeHHHHHHHHHH----HHHHHHHHHHhCcCCCceEEeeHHHHHHHHH
Confidence 99999999999999999864 477889999999999999 78999998875
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-14 Score=127.19 Aligned_cols=123 Identities=22% Similarity=0.267 Sum_probs=108.2
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~ 517 (564)
.++..+|..+|.+++|.|+++||..++..+........+..+|+.+|.|++|.|+.+||..++... ....+++..+|
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 89 (148)
T 1exr_A 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAF 89 (148)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHH
Confidence 346789999999999999999999988776655667778999999999999999999999887542 13456788899
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++...+..++.+.+.++|+.+|.|+||+
T Consensus 90 ~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~ 135 (148)
T 1exr_A 90 KVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 135 (148)
T ss_dssp HHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSS
T ss_pred HHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999888889999999999999999995
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=4.1e-15 Score=168.58 Aligned_cols=139 Identities=22% Similarity=0.407 Sum_probs=124.2
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLE 474 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~ 474 (564)
...++++++..++.+|..+|.|++|.|+.+||..++..+|..++..++..+|..+|.|++|.|+|+||+.++.... ...
T Consensus 716 ~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~ 795 (863)
T 1sjj_A 716 AKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTD 795 (863)
T ss_dssp CCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCS
T ss_pred ccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence 4467788899999999999999999999999999999999999999999999999999999999999998876543 223
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCC-----CCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQD-----NDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d-----~dg~I~~~eF~~~~~~~ 540 (564)
..+.+..+|+.+ .|++|+|+.+||+.++ ++++++.+|..+|.+ +||.|+|+||+.+|...
T Consensus 796 ~~~~l~~aF~~~-~d~~G~Is~~El~~~l-----~~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~~ 860 (863)
T 1sjj_A 796 TADQVMASFKIL-AGDKNYITVDELRREL-----PPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGE 860 (863)
T ss_dssp SSHHHHHHHHGG-GTSSSEEEHHHHHHHS-----CHHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSCC
T ss_pred CHHHHHHHHHHH-hCCCCcCcHHHHHHHC-----CHHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhcC
Confidence 456789999999 8999999999999998 488999999999976 79999999999998654
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-14 Score=129.83 Aligned_cols=123 Identities=25% Similarity=0.319 Sum_probs=109.4
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~ 517 (564)
.++..+|..+|.+++|.|+.+||..++..+........+..+|..+|.|++|.|+.+||..++.... ...+.+..+|
T Consensus 28 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 107 (169)
T 3qrx_A 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAF 107 (169)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHH
Confidence 4567899999999999999999999887776656678899999999999999999999999886431 2356788899
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.|+||.
T Consensus 108 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~ 153 (169)
T 3qrx_A 108 RLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNE 153 (169)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSC
T ss_pred HHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999988899999999999999999995
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.55 E-value=8.4e-15 Score=125.84 Aligned_cols=117 Identities=21% Similarity=0.348 Sum_probs=102.0
Q ss_pred HHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHH---hCC--CCHHHHHHHH
Q 008475 443 IRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACA---EHN--MTDVLLEDII 517 (564)
Q Consensus 443 ~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~---~~~--~~~~~~~~~~ 517 (564)
++.+|..+|.+++|.|+++||..++..+........+..+|+.+|.+++|.|+.+||..++. ..+ .+..++..+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 57899999999999999999999887776666778899999999999999999999999985 222 3566799999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+++||..++...+... +.++|+.+|.|+||+
T Consensus 82 ~~~D~d~~G~i~~~e~~~~l~~~~~~~----~~~~~~~~D~~~dg~ 123 (134)
T 1jfj_A 82 KLMDVDGDGKLTKEEVTSFFKKHGIEK----VAEQVMKADANGDGY 123 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTTTCHH----HHHHHHHHHCSSSSE
T ss_pred HHHCCCCCCccCHHHHHHHHHHhCHHH----HHHHHHHhCCCCCCc
Confidence 999999999999999999998663322 899999999999994
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.9e-14 Score=134.14 Aligned_cols=147 Identities=16% Similarity=0.184 Sum_probs=108.0
Q ss_pred CCCCCCCCHHHHHHHHHhhCCCCC-HHHHHHHHHhcCCC--CCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCC
Q 008475 416 TDNSGAITFDELKAGLRRYGSTLK-DTEIRDLMDAADVD--NSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSG 492 (564)
Q Consensus 416 ~d~~G~I~~~el~~~l~~~~~~~~-~~~~~~~~~~~D~~--~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG 492 (564)
+|+.|.|+.+|+..+....+.... ..++..+|..+|.+ ++|.|+++||..++.. ........+..+|+.+|.|++|
T Consensus 11 ~~~~g~l~~~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g 89 (207)
T 2ehb_A 11 KNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNG 89 (207)
T ss_dssp ----------CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSS
T ss_pred hccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCC
Confidence 478899999999998876543221 23356788899999 9999999999987754 2222234567899999999999
Q ss_pred ceeHHHHHHHHHhCC---CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH----cCCCCCChHHH----HHHHhHHccCCC
Q 008475 493 YITVDELQQACAEHN---MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ----KGNVGLGRRTM----RNSLNMSMRDAP 561 (564)
Q Consensus 493 ~I~~~e~~~~l~~~~---~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~----~~~~~~~~~~~----~~~f~~~D~~~~ 561 (564)
.|+.+||..++...+ ...+.+..+|..+|.|++|.|+++||..++. ..+..++.+.+ ..+|+.+|.|+|
T Consensus 90 ~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~d 169 (207)
T 2ehb_A 90 VIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKND 169 (207)
T ss_dssp EECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCS
T ss_pred eEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCC
Confidence 999999999998764 3467799999999999999999999999885 33555665544 567889999999
Q ss_pred CC
Q 008475 562 GS 563 (564)
Q Consensus 562 g~ 563 (564)
|+
T Consensus 170 G~ 171 (207)
T 2ehb_A 170 GK 171 (207)
T ss_dssp SE
T ss_pred Cc
Confidence 94
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.55 E-value=3.1e-14 Score=128.53 Aligned_cols=123 Identities=27% Similarity=0.463 Sum_probs=107.6
Q ss_pred HhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHh
Q 008475 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYF 486 (564)
Q Consensus 407 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~ 486 (564)
+..+|..+|.|++|.|+.+||..++... ..+..+|..+|.+++|.|+.+||..++..+........+..+|+.+
T Consensus 46 ~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~ 119 (172)
T 2znd_A 46 VRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 119 (172)
T ss_dssp HHHHHHHHCSSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 4567788999999999999999988753 6789999999999999999999999887665445677789999999
Q ss_pred CCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCccee--HHHHHHHHHc
Q 008475 487 DKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRID--YGEFVAMMQK 539 (564)
Q Consensus 487 D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~--~~eF~~~~~~ 539 (564)
|.|++|.|+.+||..++.. .+.+..+|..+|.|+||.|+ ++||+.++..
T Consensus 120 d~~~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~ 170 (172)
T 2znd_A 120 DRQGRGQIAFDDFIQGCIV----LQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 170 (172)
T ss_dssp CTTCSSSEEHHHHHHHHHH----HHHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred CCCCCCcCcHHHHHHHHHH----HHHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence 9999999999999999864 37889999999999999995 8999988764
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-14 Score=130.68 Aligned_cols=122 Identities=13% Similarity=0.137 Sum_probs=100.7
Q ss_pred HHHHHHHHHhc-CCCCCCccchhhhHHHHhhhc----hhhHHHHHH-----------HHHHHhCCCCCCceeHHHHHHHH
Q 008475 440 DTEIRDLMDAA-DVDNSGTIDYGEFIAATVHLN----KLEREEHLV-----------AAFQYFDKDGSGYITVDELQQAC 503 (564)
Q Consensus 440 ~~~~~~~~~~~-D~~~~g~I~~~eF~~~~~~~~----~~~~~~~l~-----------~~F~~~D~d~dG~I~~~e~~~~l 503 (564)
..+++.+|..+ |.+++|.|+++||..++..+. .......+. .+|+.+|.|++|.|+.+||..++
T Consensus 7 ~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 86 (185)
T 2sas_A 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW 86 (185)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHH
Confidence 34578899999 999999999999988776554 222233333 45999999999999999999988
Q ss_pred HhCC-----------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 504 AEHN-----------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 504 ~~~~-----------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.... .....+..+|..+|.|+||.|+++||..++...+ ++.+.+.++|+.+|.|+||+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g--~~~~~~~~~~~~~D~d~dG~ 155 (185)
T 2sas_A 87 EKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVT 155 (185)
T ss_dssp HHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCSSHHHHHHHHHTTTTSC
T ss_pred HHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC--CCHHHHHHHHHHhcCCCCCc
Confidence 6531 2347789999999999999999999999997664 67888999999999999995
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.1e-14 Score=124.52 Aligned_cols=122 Identities=20% Similarity=0.260 Sum_probs=108.2
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~ 517 (564)
..+..+|..+|.+++|.|+.+||..++..+........+..+|+.+|.+++|.|+.+||..++.... ...+.+..+|
T Consensus 11 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F 90 (147)
T 4ds7_A 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAF 90 (147)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHH
Confidence 4467789999999999999999999887766566777899999999999999999999999886431 3457789999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++...+..++.+.+..+|+.+| |+||+
T Consensus 91 ~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~ 135 (147)
T 4ds7_A 91 KVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGE 135 (147)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSS
T ss_pred HHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCc
Confidence 9999999999999999999999888889999999999999 99995
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.54 E-value=9.2e-15 Score=126.39 Aligned_cols=98 Identities=17% Similarity=0.284 Sum_probs=67.4
Q ss_pred HHHHHHhcCCCCCCccchhhhHHHHhh-hchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHHH
Q 008475 443 IRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDIIR 518 (564)
Q Consensus 443 ~~~~~~~~D~~~~g~I~~~eF~~~~~~-~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~~ 518 (564)
.+.+|..+|.+++|.|+|+||+.++.. .........++.+|+.+|+|++|+|+.+||+.++..+| +++++++.+|.
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~ 84 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR 84 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 467999999999999999999988764 33444567899999999999999999999999998876 68999999999
Q ss_pred HhCCCCCcceeHHHHHHHHHcC
Q 008475 519 EVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 519 ~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+|.|+||.|+|+||+.++.+.
T Consensus 85 ~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 85 EGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHCSSCSSSBCHHHHHHHHHHH
T ss_pred HhCCCCCCCCcHHHHHHHHHHh
Confidence 9999999999999999999865
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.8e-14 Score=128.04 Aligned_cols=121 Identities=12% Similarity=0.201 Sum_probs=105.0
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh----chhhHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL----NKLEREEHLVA 481 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~----~~~~~~~~l~~ 481 (564)
.+..+|..+|.|++|.|+.+||..++... .+++.+|..+| |++|.|+.+||..++..+ ......+.+..
T Consensus 47 ~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~ 119 (174)
T 2i7a_A 47 ECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHL 119 (174)
T ss_dssp HHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHH
Confidence 45678889999999999999999988764 67899999999 999999999999988776 44456778899
Q ss_pred HHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCc-ceeHHHHHHHHH
Q 008475 482 AFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDG-RIDYGEFVAMMQ 538 (564)
Q Consensus 482 ~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg-~I~~~eF~~~~~ 538 (564)
+++.+| |++|.|+.+||..++.. .+.+.++|+.+|.|++| .++++||+.++.
T Consensus 120 l~~~~d-d~dG~I~~~EF~~~~~~----~~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~ 172 (174)
T 2i7a_A 120 VTLRYS-DSVGRVSFPSLVCFLMR----LEAMAKTFRNLSKDGKGLYLTEMEWMSLVM 172 (174)
T ss_dssp HHHHHS-CTTSEECHHHHHHHHHH----HHHHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred HHHHHc-CCCCeEcHHHHHHHHHH----HHHHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence 999999 99999999999999864 36788999999999999 449999998753
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.2e-14 Score=141.87 Aligned_cols=122 Identities=22% Similarity=0.271 Sum_probs=108.9
Q ss_pred HHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHHH
Q 008475 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDIIR 518 (564)
Q Consensus 442 ~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~~ 518 (564)
+++++|..+|.|++|.|+.+||..++..+........+..+|+.+|.|++|.|+++||..++...- -.++++.++|+
T Consensus 303 ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk 382 (440)
T 3u0k_A 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFR 382 (440)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHH
Confidence 367899999999999999999999888776666778899999999999999999999998886531 34577899999
Q ss_pred HhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 519 EVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 519 ~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+|.|++|.|+.+||.+++...+..++++++.++|+.+|.|+||.
T Consensus 383 ~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGk 427 (440)
T 3u0k_A 383 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 427 (440)
T ss_dssp HHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSS
T ss_pred HHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 999999999999999999999888899999999999999999995
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.54 E-value=3.1e-14 Score=132.41 Aligned_cols=127 Identities=17% Similarity=0.158 Sum_probs=109.7
Q ss_pred CCCHHHHHHHHHhcCCC-CCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHH
Q 008475 437 TLKDTEIRDLMDAADVD-NSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLL 513 (564)
Q Consensus 437 ~~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~ 513 (564)
.++.++++.+|..+|.+ ++|.|+++||..++..+........+..+|+.+|.|++|.|+.+||..++...+ .+.+++
T Consensus 18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~ 97 (204)
T 1jba_A 18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL 97 (204)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence 34578899999999999 899999999999887765555677889999999999999999999999997754 677889
Q ss_pred HHHHHHhCCCCCcceeHHHHHHHHHcC----C------------CC-CChHHHHHHHhHHccCCCCC
Q 008475 514 EDIIREVDQDNDGRIDYGEFVAMMQKG----N------------VG-LGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 514 ~~~~~~~d~d~dg~I~~~eF~~~~~~~----~------------~~-~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|..+|.|++|.|+++||..++... + .. ...+.+..+|+.+|.|+||+
T Consensus 98 ~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~ 164 (204)
T 1jba_A 98 KWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQ 164 (204)
T ss_dssp HHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSC
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCe
Confidence 999999999999999999999988764 1 11 34577999999999999995
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.2e-14 Score=129.21 Aligned_cols=124 Identities=22% Similarity=0.265 Sum_probs=107.9
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDI 516 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~ 516 (564)
..++..+|..+|.+++|.|+++||..++..+........+..+|+.+|.|++|.|+.+||..++.... ...+.+..+
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~ 89 (179)
T 2f2o_A 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREA 89 (179)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHH
Confidence 45578899999999999999999999887766556677889999999999999999999998886431 245678999
Q ss_pred HHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 517 IREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 517 ~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
|..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.|+||.
T Consensus 90 F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~ 136 (179)
T 2f2o_A 90 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136 (179)
T ss_dssp HHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSS
T ss_pred HHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCc
Confidence 99999999999999999999999888889999999999999999995
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.8e-14 Score=125.81 Aligned_cols=123 Identities=15% Similarity=0.188 Sum_probs=108.8
Q ss_pred HHHHHHHHhcC-CCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC-------CCHHH
Q 008475 441 TEIRDLMDAAD-VDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN-------MTDVL 512 (564)
Q Consensus 441 ~~~~~~~~~~D-~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~-------~~~~~ 512 (564)
.++..+|..+| .+++|.|+.+||..++..+........+..+|+.+|.+++|.|+.+||..++.... .....
T Consensus 13 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 92 (158)
T 2jnf_A 13 KLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQE 92 (158)
T ss_dssp HHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSST
T ss_pred HHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHH
Confidence 34678999999 99999999999999887766556677889999999999999999999999986532 34567
Q ss_pred HHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 513 LEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 513 ~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+..+|..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.|+||.
T Consensus 93 ~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~ 143 (158)
T 2jnf_A 93 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGT 143 (158)
T ss_dssp HHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSE
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCc
Confidence 899999999999999999999999998888889999999999999999994
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.54 E-value=2.7e-14 Score=127.13 Aligned_cols=123 Identities=22% Similarity=0.314 Sum_probs=106.8
Q ss_pred HHHHHHHHhcCCCC-CCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC------CCCHHHH
Q 008475 441 TEIRDLMDAADVDN-SGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH------NMTDVLL 513 (564)
Q Consensus 441 ~~~~~~~~~~D~~~-~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~------~~~~~~~ 513 (564)
.++..+|..+|.++ +|.|+.+||..++..+........+..+|+.+|.|++|.|+.+||..++... ......+
T Consensus 18 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 97 (161)
T 1dtl_A 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEEL 97 (161)
T ss_dssp HHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHH
T ss_pred HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHH
Confidence 34678999999999 9999999999988776655567788999999999999999999999988653 2346778
Q ss_pred HHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 514 EDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 514 ~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.|+||.
T Consensus 98 ~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~ 147 (161)
T 1dtl_A 98 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 147 (161)
T ss_dssp HHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSE
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999988877789999999999999999994
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.53 E-value=4.5e-14 Score=125.66 Aligned_cols=123 Identities=18% Similarity=0.251 Sum_probs=109.6
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~ 517 (564)
.++..+|..+|.+++|.|+++||..++..+........+..+|+.+|.+++|.|+.+||..++... ....+.+..+|
T Consensus 23 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 102 (161)
T 3fwb_A 23 QEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAF 102 (161)
T ss_dssp HHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 346789999999999999999999988776655667789999999999999999999999988642 23467899999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.|+||.
T Consensus 103 ~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~ 148 (161)
T 3fwb_A 103 QLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGE 148 (161)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSS
T ss_pred HHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999988889999999999999999995
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.53 E-value=4.4e-14 Score=125.82 Aligned_cols=123 Identities=23% Similarity=0.317 Sum_probs=108.5
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC------CCHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN------MTDVLLE 514 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~------~~~~~~~ 514 (564)
.++..+|..+|.+++|.|+++||..++..+........+..+|+.+|.+++|.|+.+||..++.... .....+.
T Consensus 20 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~ 99 (162)
T 1top_A 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELA 99 (162)
T ss_dssp HHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHH
Confidence 4567899999999999999999999887665555677889999999999999999999998886431 1456788
Q ss_pred HHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 515 DIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 515 ~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+|..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.|+||.
T Consensus 100 ~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~ 148 (162)
T 1top_A 100 NCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGR 148 (162)
T ss_dssp HHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSS
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999999888889999999999999999995
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.53 E-value=4.1e-15 Score=131.09 Aligned_cols=111 Identities=20% Similarity=0.256 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHH
Q 008475 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLED 515 (564)
Q Consensus 438 ~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~ 515 (564)
++..+++.++..+|.+++ |.+|..+ ......++.+|+.+|.|++|.|+.+||+.++..+| ++++++++
T Consensus 21 ~~~~~~~~i~~~~d~~~~----~~~~~~l------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~ 90 (150)
T 2jjz_A 21 RQERRLAEINREFLCDQK----YSDEENL------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKK 90 (150)
T ss_dssp HHHHHHHHHHHHHHTCGG----GSSCTTH------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHH
T ss_pred CcHHHHHHHHHHhccCCC----chhhHhH------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHH
Confidence 457788999999987764 4444332 24466789999999999999999999999999887 78999999
Q ss_pred HHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 516 IIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 516 ~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+|..+|.|++|.|+|+||+.++... ...+.++|+.||.||+|+
T Consensus 91 l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~~aF~~~D~d~~G~ 133 (150)
T 2jjz_A 91 MISEVTGGVSDTISYRDFVNMMLGK-----RSAVLKLVMMFEGKANES 133 (150)
T ss_dssp HHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHHHHHHC--------
T ss_pred HHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999865 456899999999999997
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.5e-14 Score=130.44 Aligned_cols=122 Identities=15% Similarity=0.191 Sum_probs=100.5
Q ss_pred HHHHHHHHHhc-CCCCCCccchhhhHHHHhhh----chhhHHHHHHHHH-----------HHhCCCCCCceeHHHHHHHH
Q 008475 440 DTEIRDLMDAA-DVDNSGTIDYGEFIAATVHL----NKLEREEHLVAAF-----------QYFDKDGSGYITVDELQQAC 503 (564)
Q Consensus 440 ~~~~~~~~~~~-D~~~~g~I~~~eF~~~~~~~----~~~~~~~~l~~~F-----------~~~D~d~dG~I~~~e~~~~l 503 (564)
..+++.+|..+ |.|++|.|+++||..++..+ ........+..+| +.+|.|++|.|+.+||..++
T Consensus 11 ~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 90 (191)
T 2ccm_A 11 RNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMW 90 (191)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHH
Confidence 34578899999 99999999999998887655 2222333444444 99999999999999999887
Q ss_pred HhCC-----------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 504 AEHN-----------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 504 ~~~~-----------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.... .....+..+|..+|.|+||.|+++||..++...+ ++.+.+..+|+.+|.|+||+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~~~~~~~~~~~~~D~d~dG~ 159 (191)
T 2ccm_A 91 AECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFDTLSDGGKTM 159 (191)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--CCHHHHHHHHHHHTTTTTSC
T ss_pred HHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCC
Confidence 6531 1246788999999999999999999999998774 78899999999999999995
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.9e-14 Score=129.23 Aligned_cols=122 Identities=20% Similarity=0.256 Sum_probs=110.0
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~ 517 (564)
++++.+|..+|.+++|.|+++||..++..+.....+..+..++..+|.+++|.|+..||..++.... -+.+++..+|
T Consensus 11 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF 90 (176)
T 2lhi_A 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAF 90 (176)
T ss_dssp GHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHH
Confidence 4578899999999999999999999888777777788899999999999999999999998886543 2356789999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++...+..++.+++.++|+++| ||||.
T Consensus 91 ~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~ 135 (176)
T 2lhi_A 91 KVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGE 135 (176)
T ss_dssp HHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSC
T ss_pred HHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCe
Confidence 9999999999999999999999988999999999999999 99995
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.53 E-value=5.4e-14 Score=127.14 Aligned_cols=122 Identities=15% Similarity=0.246 Sum_probs=100.3
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHH----HhhhchhhHHHH-----------HHHHHHHhCCCCCCceeHHHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAA----TVHLNKLEREEH-----------LVAAFQYFDKDGSGYITVDELQQACA 504 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~----~~~~~~~~~~~~-----------l~~~F~~~D~d~dG~I~~~e~~~~l~ 504 (564)
..+++.+|..+|.+++|.|+++||..+ +..+........ +..+|+.+|.|++|.|+.+||..++.
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~ 85 (176)
T 1nya_A 6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTE 85 (176)
T ss_dssp HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 345788999999999999999999884 333332222222 33889999999999999999999987
Q ss_pred hCC--CC--------HHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 505 EHN--MT--------DVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 505 ~~~--~~--------~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
... .. ...+..+|..+|.|++|.|+++||..++...+ ++.+.+..+|+.+|.|+||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~~~~~~~~~~D~d~dg~ 152 (176)
T 1nya_A 86 NLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGE 152 (176)
T ss_dssp HHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSE
T ss_pred HHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCC
Confidence 642 33 25688999999999999999999999998875 88899999999999999994
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.52 E-value=3e-14 Score=131.81 Aligned_cols=124 Identities=20% Similarity=0.180 Sum_probs=105.0
Q ss_pred HHHHHHHHHhcCCC-CCCccchhhhHHHHhhhchhhH-HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHH
Q 008475 440 DTEIRDLMDAADVD-NSGTIDYGEFIAATVHLNKLER-EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLED 515 (564)
Q Consensus 440 ~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~~~~~-~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~ 515 (564)
..+++.+|..+|.+ ++|.|+++||..++..+..... ...+..+|+.+|.|++|.|+.+||..++..++ .+.+++..
T Consensus 13 ~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~ 92 (198)
T 2r2i_A 13 ATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRW 92 (198)
T ss_dssp TSCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHH
Confidence 34578899999987 8999999999998876554333 45689999999999999999999999998764 56788999
Q ss_pred HHHHhCCCCCcceeHHHHHHHHHcCC------CCCCh-HHHHHHHhHHccCCCCC
Q 008475 516 IIREVDQDNDGRIDYGEFVAMMQKGN------VGLGR-RTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 516 ~~~~~d~d~dg~I~~~eF~~~~~~~~------~~~~~-~~~~~~f~~~D~~~~g~ 563 (564)
+|..+|.|++|.|+++||..++.... ...+. +.+..+|+.+|.|+||+
T Consensus 93 ~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~ 147 (198)
T 2r2i_A 93 YFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGE 147 (198)
T ss_dssp HHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSE
T ss_pred HHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999998764 34444 45899999999999994
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.6e-14 Score=125.34 Aligned_cols=121 Identities=12% Similarity=0.125 Sum_probs=105.9
Q ss_pred HHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHh-CCCCCCceeHHHHHHHHHhC--------CCCHHHH
Q 008475 443 IRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYF-DKDGSGYITVDELQQACAEH--------NMTDVLL 513 (564)
Q Consensus 443 ~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~-D~d~dG~I~~~e~~~~l~~~--------~~~~~~~ 513 (564)
++.+|..+|.+++|.|+++||..++..+........+..+|+.+ |.+++|.|+.+||..++... ....+.+
T Consensus 6 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~ 85 (148)
T 1m45_A 6 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDF 85 (148)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHH
Confidence 46789999999999999999999887776556677899999999 99999999999999988655 2456789
Q ss_pred HHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 514 EDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 514 ~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|..+|.|++|.|+.+||..++...+..++.+++..+|+.+|.|+||.
T Consensus 86 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~ 135 (148)
T 1m45_A 86 VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGE 135 (148)
T ss_dssp HHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSE
T ss_pred HHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCe
Confidence 99999999999999999999999999888889999999999999999994
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.3e-14 Score=138.33 Aligned_cols=142 Identities=16% Similarity=0.155 Sum_probs=116.3
Q ss_pred CCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC-CCCccchhhhHHHHhhhc-hhhHHHHHHHHHHHhCCCCCCceeHH
Q 008475 420 GAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD-NSGTIDYGEFIAATVHLN-KLEREEHLVAAFQYFDKDGSGYITVD 497 (564)
Q Consensus 420 G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~-~~~~~~~l~~~F~~~D~d~dG~I~~~ 497 (564)
+.++.+++..+.... .++.+++..+|..+|.+ ++|.|+++||..++..+. .......+..+|+.+|.|++|.|+.+
T Consensus 72 ~~l~~e~l~~l~~~~--~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~ 149 (256)
T 2jul_A 72 VRHQPEGLDQLQAQT--KFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFE 149 (256)
T ss_dssp ----CTHHHHHHHHT--TSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSH
T ss_pred ccCCHHHHHHHHHHh--CCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHH
Confidence 457777888777654 36888999999999865 899999999999887653 23456678899999999999999999
Q ss_pred HHHHHHHhC--CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC----C--------CCCChHHHHHHHhHHccCCCCC
Q 008475 498 ELQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG----N--------VGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 498 e~~~~l~~~--~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~----~--------~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
||..++..+ +...+++..+|..+|.|++|.|+++||..++... + .....+.+.++|+.+|.|+||+
T Consensus 150 Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~ 229 (256)
T 2jul_A 150 DFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGV 229 (256)
T ss_dssp HHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCS
T ss_pred HHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCc
Confidence 999998765 4678889999999999999999999999998764 2 2235678999999999999995
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.51 E-value=3.1e-14 Score=145.68 Aligned_cols=152 Identities=22% Similarity=0.252 Sum_probs=125.1
Q ss_pred hcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCC
Q 008475 412 KAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGS 491 (564)
Q Consensus 412 ~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~d 491 (564)
+.+|.+.+|.|...++.............++++.+|..+|.+++|.|+.+||..++..+......+.+..+|+.+|.|++
T Consensus 283 k~iD~de~g~i~~~e~~~~~~~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~Dgd 362 (450)
T 3sg6_A 283 KGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 362 (450)
T ss_dssp EEESCCTTSTTTTTCBCCC---CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSS
T ss_pred ccCCccccccchhhhhhhhhcccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCC
Confidence 45788899988877764322111111123567889999999999999999999988776665667889999999999999
Q ss_pred CceeHHHHHHHHHhCC---CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 492 GYITVDELQQACAEHN---MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 492 G~I~~~e~~~~l~~~~---~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
|.|+++||..++.... ...+.+..+|..+|.|++|.|+.+||..++...+..++.+.+..+|..+|.|+||.
T Consensus 363 G~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~ 437 (450)
T 3sg6_A 363 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 437 (450)
T ss_dssp SSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSS
T ss_pred CcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 9999999999987542 45678999999999999999999999999999888899999999999999999995
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.50 E-value=9.7e-14 Score=127.64 Aligned_cols=123 Identities=19% Similarity=0.254 Sum_probs=104.4
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC-CCCHHHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH-NMTDVLLEDIIR 518 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~-~~~~~~~~~~~~ 518 (564)
..++..+|..+|.+++|.|+.+||..++..+..... ..+..+|+.+|.|++|.|+.+||..++... ....+.+..+|.
T Consensus 51 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~F~ 129 (191)
T 3k21_A 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFR 129 (191)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHHHH
Confidence 445788999999999999999999998876654434 678899999999999999999999988443 367889999999
Q ss_pred HhCCCCCcceeHHHHHHHHHcC--CCCCCh---HHHHHHHhHHccCCCCC
Q 008475 519 EVDQDNDGRIDYGEFVAMMQKG--NVGLGR---RTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 519 ~~d~d~dg~I~~~eF~~~~~~~--~~~~~~---~~~~~~f~~~D~~~~g~ 563 (564)
.+|.|++|.|+.+||..++... +..++. +.+.++|+.+|.|+||+
T Consensus 130 ~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~ 179 (191)
T 3k21_A 130 VFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGK 179 (191)
T ss_dssp HHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSS
T ss_pred HhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCe
Confidence 9999999999999999999874 334444 46889999999999995
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.50 E-value=6.3e-14 Score=123.41 Aligned_cols=122 Identities=20% Similarity=0.277 Sum_probs=107.8
Q ss_pred HHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC--CC-----CHHHHH
Q 008475 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NM-----TDVLLE 514 (564)
Q Consensus 442 ~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~--~~-----~~~~~~ 514 (564)
.+..+|..+|.+++|.|+++||..++..+........+..+|+.+|.+++|.|+.+||..++... .. ..+.+.
T Consensus 12 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
T 3ox6_A 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELR 91 (153)
T ss_dssp HHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHH
Confidence 46778999999999999999999988776655667788999999999999999999999988643 11 357789
Q ss_pred HHHHHhCCCCCcceeHHHHHHHHHc-CCCCCChHHHHHHHhHHccCCCCC
Q 008475 515 DIIREVDQDNDGRIDYGEFVAMMQK-GNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 515 ~~~~~~d~d~dg~I~~~eF~~~~~~-~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+|..+|.|++|.|+.+||..++.. .+..++.+.+..+|+.+|.|+||+
T Consensus 92 ~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~ 141 (153)
T 3ox6_A 92 DAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGR 141 (153)
T ss_dssp HHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSS
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCe
Confidence 9999999999999999999999998 778889999999999999999995
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.3e-14 Score=132.57 Aligned_cols=124 Identities=19% Similarity=0.258 Sum_probs=97.0
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC--CCCHHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLLEDII 517 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~--~~~~~~~~~~~ 517 (564)
...+..+|..+|.+++|.|+++||..++..+........+..+|+.+|.|++|.|+.+||..++... ...++.+..+|
T Consensus 56 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F 135 (197)
T 3pm8_A 56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPF 135 (197)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 3446789999999999999999999988776555567788999999999999999999998876432 25678899999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcC--CCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKG--NVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~--~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++... +..++.+.+..+|+.+|.|+||.
T Consensus 136 ~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~ 183 (197)
T 3pm8_A 136 KFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGE 183 (197)
T ss_dssp HHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSS
T ss_pred HHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999999877 55567888999999999999995
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.50 E-value=5e-14 Score=130.75 Aligned_cols=141 Identities=17% Similarity=0.138 Sum_probs=109.9
Q ss_pred CCCCCHHHHHHHHHhhCCCCC-HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHH
Q 008475 419 SGAITFDELKAGLRRYGSTLK-DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVD 497 (564)
Q Consensus 419 ~G~I~~~el~~~l~~~~~~~~-~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~ 497 (564)
++.++.+++..+.+....... ..++..+|..+|.+++|.|+++||..+ ..+..... +..+|+.+|.|++|.|+.+
T Consensus 6 s~~l~~~~~~~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~ 81 (202)
T 2bec_A 6 SHAAVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFP 81 (202)
T ss_dssp -----CCSTTTHHHHHCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHH
T ss_pred cCCcCHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHH
Confidence 334667777777765543221 334677899999999999999999887 33332222 7889999999999999999
Q ss_pred HHHHHHHhCC-------------------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC-CCCCChHHHHHHHhH--
Q 008475 498 ELQQACAEHN-------------------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG-NVGLGRRTMRNSLNM-- 555 (564)
Q Consensus 498 e~~~~l~~~~-------------------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~-~~~~~~~~~~~~f~~-- 555 (564)
||..++.... ...+.+..+|..+|.|++|.|+.+||..++... +..++.+++..+|+.
T Consensus 82 EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~ 161 (202)
T 2bec_A 82 GFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTV 161 (202)
T ss_dssp HHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 9999986542 235678999999999999999999999999988 777888888888887
Q ss_pred --HccCCCCC
Q 008475 556 --SMRDAPGS 563 (564)
Q Consensus 556 --~D~~~~g~ 563 (564)
+|.|+||.
T Consensus 162 ~~~D~d~dG~ 171 (202)
T 2bec_A 162 QEADEDGDGA 171 (202)
T ss_dssp HHHCSSCSSS
T ss_pred HHcCCCCCCc
Confidence 99999995
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-13 Score=126.37 Aligned_cols=123 Identities=15% Similarity=0.194 Sum_probs=101.5
Q ss_pred HHHHHHHHhcCCCCCCccchhhhH-----HHHhhhchhhHHH-----HHHHHHHHhCCCCCCceeHHHHHHHHHhCC---
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFI-----AATVHLNKLEREE-----HLVAAFQYFDKDGSGYITVDELQQACAEHN--- 507 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~-----~~~~~~~~~~~~~-----~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--- 507 (564)
.+++.+|..+|.+++|.|+++||. .++..+....... .+..+|+.+|.|++|.|+.+||..++....
T Consensus 16 ~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~ 95 (191)
T 1uhk_A 16 GRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDE 95 (191)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcch
Confidence 457789999999999999999998 5555444333333 688999999999999999999998875431
Q ss_pred ------CCHHHHH----HHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 508 ------MTDVLLE----DIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 508 ------~~~~~~~----~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
...+.+. .+|..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.|+||.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~ 161 (191)
T 1uhk_A 96 LEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQ 161 (191)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 1112233 8999999999999999999999998887788999999999999999995
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=3.6e-14 Score=132.75 Aligned_cols=127 Identities=17% Similarity=0.175 Sum_probs=100.7
Q ss_pred CCCHHHHHHHHHhcCCC-CCCccchhhhHHHHhhhchhh-HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHH
Q 008475 437 TLKDTEIRDLMDAADVD-NSGTIDYGEFIAATVHLNKLE-REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVL 512 (564)
Q Consensus 437 ~~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~~~~-~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~ 512 (564)
.++.++++.+|..+|.+ ++|.|+.+||..++..+.... ....+..+|+.+|.|++|.|+.+||..++..++ ...++
T Consensus 15 ~ls~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~ 94 (211)
T 2ggz_A 15 AVPTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQK 94 (211)
T ss_dssp ---------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHH
Confidence 45677889999999988 899999999998876554433 345689999999999999999999999997654 56788
Q ss_pred HHHHHHHhCCCCCcceeHHHHHHHHHcCC-----CCCCh-HHHHHHHhHHccCCCCC
Q 008475 513 LEDIIREVDQDNDGRIDYGEFVAMMQKGN-----VGLGR-RTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 513 ~~~~~~~~d~d~dg~I~~~eF~~~~~~~~-----~~~~~-~~~~~~f~~~D~~~~g~ 563 (564)
+..+|..+|.|++|.|+++||..++.... ..... +.+..+|+.+|.|+||+
T Consensus 95 l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~ 151 (211)
T 2ggz_A 95 LKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGE 151 (211)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSS
T ss_pred HHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999998764 34444 55899999999999995
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.49 E-value=2e-13 Score=119.14 Aligned_cols=123 Identities=15% Similarity=0.177 Sum_probs=107.3
Q ss_pred CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC--C--CCHHHH
Q 008475 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--N--MTDVLL 513 (564)
Q Consensus 438 ~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~--~--~~~~~~ 513 (564)
++.++++.+|..+|.+++|.|+.+||..++..+........+..+|.. +++|.|+.+||..++... . .....+
T Consensus 2 ls~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l 78 (145)
T 2bl0_B 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEM 78 (145)
T ss_dssp CCHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHH
T ss_pred CCHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHH
Confidence 355668999999999999999999999888766555566777888887 899999999999998654 1 346789
Q ss_pred HHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 514 EDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 514 ~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.|+||.
T Consensus 79 ~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~ 128 (145)
T 2bl0_B 79 LDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGA 128 (145)
T ss_dssp HHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSE
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCc
Confidence 99999999999999999999999999888889999999999999999994
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-13 Score=122.46 Aligned_cols=122 Identities=16% Similarity=0.195 Sum_probs=108.5
Q ss_pred HHHHHHHHhcCC--CCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC----CCCHHHHH
Q 008475 441 TEIRDLMDAADV--DNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH----NMTDVLLE 514 (564)
Q Consensus 441 ~~~~~~~~~~D~--~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~~~~~~~~ 514 (564)
.++..+|..+|. +++|.|+++||..++..+........+..+ +.+|.+++|.|+.+||..++... ......+.
T Consensus 9 ~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~ 87 (156)
T 1wdc_C 9 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYM 87 (156)
T ss_dssp HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHH
T ss_pred HHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHH
Confidence 346789999999 999999999999988776655566778888 99999999999999999998764 45678899
Q ss_pred HHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhH--HccCCCCC
Q 008475 515 DIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNM--SMRDAPGS 563 (564)
Q Consensus 515 ~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~--~D~~~~g~ 563 (564)
.+|..+|.|++|.|+.+||..++...+..++.+.+..+|+. +|.|++|.
T Consensus 88 ~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~ 138 (156)
T 1wdc_C 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGN 138 (156)
T ss_dssp HHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSE
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCc
Confidence 99999999999999999999999998888899999999999 99999994
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=5e-14 Score=130.83 Aligned_cols=123 Identities=15% Similarity=0.262 Sum_probs=104.4
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIR 518 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~ 518 (564)
.++..+|..+|.+++|.|+++||..++..+........+..+|+.+|.|++|.|+.+||..++.... ...+.+..+|.
T Consensus 37 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 116 (204)
T 3e3r_A 37 QGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFA 116 (204)
T ss_dssp ---CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHH
Confidence 4577899999999999999999999888776666678899999999999999999999999886543 34567899999
Q ss_pred HhCCCCCcceeHHHHHHHHHcC-------CCCCChHHHHHHHhHHcc-CCCCC
Q 008475 519 EVDQDNDGRIDYGEFVAMMQKG-------NVGLGRRTMRNSLNMSMR-DAPGS 563 (564)
Q Consensus 519 ~~d~d~dg~I~~~eF~~~~~~~-------~~~~~~~~~~~~f~~~D~-~~~g~ 563 (564)
.+|.|++|.|+++||..++... +...+.+.+..+|+.+|. |+||+
T Consensus 117 ~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~ 169 (204)
T 3e3r_A 117 KLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQ 169 (204)
T ss_dssp HHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSC
T ss_pred HhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCc
Confidence 9999999999999999999743 344556789999999998 99995
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.48 E-value=6.8e-14 Score=128.32 Aligned_cols=121 Identities=22% Similarity=0.261 Sum_probs=105.8
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIR 518 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~ 518 (564)
.++..+|..+|.+++|.|+++||..++..+........+..+|+.+|.|++|.|+.+||..++..+. ...+.+..+|.
T Consensus 10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~ 89 (188)
T 1s6i_A 10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFS 89 (188)
T ss_dssp CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 4578899999999999999999999887766555667889999999999999999999999886553 23467899999
Q ss_pred HhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 519 EVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 519 ~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+|.|++|.|+.+||..++...+ ++.+.+.++|+.+|.|+||.
T Consensus 90 ~~D~d~dG~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~ 132 (188)
T 1s6i_A 90 YFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQ 132 (188)
T ss_dssp HTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHCSSSSSE
T ss_pred HHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCc
Confidence 99999999999999999998654 67788999999999999994
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-13 Score=129.60 Aligned_cols=116 Identities=16% Similarity=0.145 Sum_probs=103.5
Q ss_pred HHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCC
Q 008475 443 IRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQ 522 (564)
Q Consensus 443 ~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~ 522 (564)
+..+|..+|.+++|.|+.+||..++..+........+..+|+.+|.|++|.|+.+||..++... ..+..+|..+|.
T Consensus 53 l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~----~~l~~~F~~~D~ 128 (220)
T 3sjs_A 53 IYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM----ELAYNLFVMNAR 128 (220)
T ss_dssp HHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH----HHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH----HHHHHHHHHHCC
Confidence 4678999999999999999999887766655667789999999999999999999999998653 778999999999
Q ss_pred CCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 523 DNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 523 d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
|++|.|+.+||..++...+..++.+++..+|+.+| ||||.
T Consensus 129 d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~ 168 (220)
T 3sjs_A 129 ARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAF 168 (220)
T ss_dssp SSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCS
T ss_pred CCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCc
Confidence 99999999999999999888889999999999999 99995
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.8e-13 Score=124.53 Aligned_cols=118 Identities=18% Similarity=0.281 Sum_probs=100.9
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC-CCHHHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN-MTDVLLEDIIR 518 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~-~~~~~~~~~~~ 518 (564)
..++..+|..+|.+++|.|+++||..++..+... ...+..+|+.+|.|++|.|+.+||..++.... ..++.+..+|.
T Consensus 38 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~ 115 (180)
T 3mse_B 38 IKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFN 115 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHH
Confidence 3567889999999999999999999988765432 46788999999999999999999999886543 45578999999
Q ss_pred HhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCC
Q 008475 519 EVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAP 561 (564)
Q Consensus 519 ~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~ 561 (564)
.+|.|++|.|+.+||..++. +..++.+++.++|+.+|.|+|
T Consensus 116 ~~D~d~~G~I~~~El~~~l~--~~~~~~~~~~~~~~~~d~~~d 156 (180)
T 3mse_B 116 KIDKDEDGYISKSDIVSLVH--DKVLDNNDIDNFFLSVHSIKK 156 (180)
T ss_dssp HHCTTCSSCBCHHHHHHHTT--TSSCCHHHHHHHHHHHHTC--
T ss_pred HHCCCCCCCCCHHHHHHHHc--CCCCCHHHHHHHHHHhhhccC
Confidence 99999999999999999998 457789999999999999988
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.48 E-value=3.5e-13 Score=118.02 Aligned_cols=121 Identities=11% Similarity=0.100 Sum_probs=107.4
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHh---CCCCCCceeHHHHHHHHHhC-----CCCHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYF---DKDGSGYITVDELQQACAEH-----NMTDVL 512 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~---D~d~dG~I~~~e~~~~l~~~-----~~~~~~ 512 (564)
.++..+|..+|.+++|.|+++||..++..+........+..+|+.+ |.++ |.|+.+||..++... ......
T Consensus 8 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~ 86 (149)
T 2mys_C 8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFED 86 (149)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHH
Confidence 4577899999999999999999998887766556677888999999 9999 999999999998764 135678
Q ss_pred HHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 513 LEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 513 ~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+..+|..+|.|++|.|+.+||..++...+..++.+++..+|+. |.|+||.
T Consensus 87 ~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~ 136 (149)
T 2mys_C 87 FVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGC 136 (149)
T ss_pred HHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCc
Confidence 8999999999999999999999999988888899999999999 9999995
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-13 Score=125.88 Aligned_cols=123 Identities=15% Similarity=0.236 Sum_probs=96.0
Q ss_pred HHHHHHHHhcCCCCCCccchhhhH-----HHHhhhchhhHHH-----HHHHHHHHhCCCCCCceeHHHHHHHHHhCC---
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFI-----AATVHLNKLEREE-----HLVAAFQYFDKDGSGYITVDELQQACAEHN--- 507 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~-----~~~~~~~~~~~~~-----~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--- 507 (564)
.++..+|..+|.+++|.|+++||. .++..+....... .+..+|+.+|.|++|.|+.+||..++....
T Consensus 20 ~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~ 99 (195)
T 1qv0_A 20 KRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSE 99 (195)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhh
Confidence 346789999999999999999998 3444333322332 588899999999999999999998875431
Q ss_pred ------CCHHHHH----HHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 508 ------MTDVLLE----DIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 508 ------~~~~~~~----~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
-..+.+. .+|..+|.|++|.|+.+||..++...+..++.+.+.++|+.+|.|+||+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~ 165 (195)
T 1qv0_A 100 LKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGD 165 (195)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSC
T ss_pred hhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 1112233 8999999999999999999999998888888999999999999999995
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-13 Score=122.20 Aligned_cols=122 Identities=19% Similarity=0.234 Sum_probs=98.9
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhh----hchhhHH-----------HHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVH----LNKLERE-----------EHLVAAFQYFDKDGSGYITVDELQQACA 504 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~----~~~~~~~-----------~~l~~~F~~~D~d~dG~I~~~e~~~~l~ 504 (564)
..+++.+|..+|.+++|.|+++||..++.. +...... ..+..+|+.+|.|++|.|+.+||..++.
T Consensus 3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~ 82 (166)
T 3akb_A 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAV 82 (166)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHH
T ss_pred HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 457889999999999999999999886532 1211111 1223679999999999999999998876
Q ss_pred hCC-CC--------HHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 505 EHN-MT--------DVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 505 ~~~-~~--------~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
... -. ...+..+|..+|.|++|.|+++||..++...+ ++.+.+..+|+.+|.|+||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~~~~~~D~d~dg~ 148 (166)
T 3akb_A 83 KRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGK 148 (166)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSB
T ss_pred HHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCc
Confidence 542 11 23488899999999999999999999998875 88899999999999999995
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.46 E-value=2.9e-13 Score=122.23 Aligned_cols=120 Identities=21% Similarity=0.294 Sum_probs=102.7
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQY 485 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~ 485 (564)
.+..+|..+|.|++|.|+.+||..++... ..+..+|..+|.+++|.|+.+||..++..+........+..+|+.
T Consensus 48 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 121 (173)
T 1alv_A 48 TCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRR 121 (173)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCccCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 45677888999999999999999988753 678999999999999999999999888766555566788899999
Q ss_pred hCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 486 FDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 486 ~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
+| |++|.|+.+||..++.. .+.+.++|..+|.|++|.|+.+ |.+++
T Consensus 122 ~d-d~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~~G~i~~~-~~~~l 167 (173)
T 1alv_A 122 YS-DEGGNMDFDNFISCLVR----LDAMFRAFKSLDKDGTGQIQVN-IQEWL 167 (173)
T ss_dssp HT-CSSSCBCHHHHHHHHHH----HHHHHHHHHHHSSSCCSEEEEE-HHHHH
T ss_pred hc-CCCCcCcHHHHHHHHHH----HHHHHHHHHHhCCCCCCeecHh-HHHHH
Confidence 99 99999999999999864 4778999999999999999865 55444
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A | Back alignment and structure |
|---|
Probab=99.45 E-value=4.5e-15 Score=122.98 Aligned_cols=101 Identities=23% Similarity=0.355 Sum_probs=88.6
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---C--C
Q 008475 434 YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---N--M 508 (564)
Q Consensus 434 ~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~--~ 508 (564)
++..++..+++.+|..+| ++|.|+|+||+.++... ......++.+|+.+|.|++|.|+.+||+.++..+ | +
T Consensus 2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVL 77 (108)
T ss_dssp TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT--TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCC
T ss_pred ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC--cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCC
Confidence 567788999999999998 88999999999887422 2334568899999999999999999999999876 4 7
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 509 TDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 509 ~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
++++++.+|..+|.|+||.|+|+||+.++.
T Consensus 78 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 78 TASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp CTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 889999999999999999999999999875
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.45 E-value=7.2e-14 Score=122.98 Aligned_cols=122 Identities=13% Similarity=0.128 Sum_probs=105.6
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCC--CCCceeHHHHHHHHHhCC-----CCHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKD--GSGYITVDELQQACAEHN-----MTDVLL 513 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d--~dG~I~~~e~~~~l~~~~-----~~~~~~ 513 (564)
.++..+|..+|.+++|.|+++||..++..+........+..+|..+|.+ ++|.|+.+||..++.... -..+.+
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l 89 (151)
T 1w7j_B 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDY 89 (151)
T ss_dssp -CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHH
Confidence 3478899999999999999999998887766556677899999999999 999999999999987643 124567
Q ss_pred HHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 514 EDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 514 ~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|..+|.|++|.|+.+||..++...+..++.+++..+|+.+| |+||.
T Consensus 90 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~ 138 (151)
T 1w7j_B 90 LEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGC 138 (151)
T ss_dssp HHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSE
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCe
Confidence 88999999999999999999999999888889999999999999 99994
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2.4e-13 Score=128.82 Aligned_cols=140 Identities=14% Similarity=0.150 Sum_probs=110.6
Q ss_pred CCHHHHHHHHHhhCCCCCHHHHHHHHHhc-CCCCCCccchhhhHHHHhhh-chhhHHHHHHHHHHHhCCCCCCceeHHHH
Q 008475 422 ITFDELKAGLRRYGSTLKDTEIRDLMDAA-DVDNSGTIDYGEFIAATVHL-NKLEREEHLVAAFQYFDKDGSGYITVDEL 499 (564)
Q Consensus 422 I~~~el~~~l~~~~~~~~~~~~~~~~~~~-D~~~~g~I~~~eF~~~~~~~-~~~~~~~~l~~~F~~~D~d~dG~I~~~e~ 499 (564)
++.+++..+.+.. .++..+++.++..+ +.+++|.|+++||..++..+ ........+..+|+.+|.|++|.|+.+||
T Consensus 47 ~~~~~l~~l~~~~--~~s~~ei~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef 124 (229)
T 3dd4_A 47 HRPEALELLEAQS--KFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDF 124 (229)
T ss_dssp THHHHHHHHHHHH--HHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHH
T ss_pred CCHHHHHHHHHhc--CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHH
Confidence 3355555554432 34567777777777 57889999999999887663 23345667889999999999999999999
Q ss_pred HHHHHhC--CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC------------CCCCChHHHHHHHhHHccCCCCC
Q 008475 500 QQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG------------NVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 500 ~~~l~~~--~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~------------~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..++... +..++.+..+|..+|.|+||.|+++||..++... +...+.+.+.++|+.+|.|+||+
T Consensus 125 ~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~ 202 (229)
T 3dd4_A 125 IKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGV 202 (229)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSB
T ss_pred HHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCc
Confidence 9998764 3567889999999999999999999999998864 34456788999999999999995
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.8e-13 Score=119.63 Aligned_cols=119 Identities=22% Similarity=0.365 Sum_probs=100.4
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~ 517 (564)
.++..+|..+|.+++|.|+.+|| ..+...... ..+..+|+.+|.+++|.|+.+||..++.... ...+.+..+|
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~---~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F 81 (155)
T 3ll8_B 6 KRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQN---PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAF 81 (155)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTC---TTHHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCCeEcHHHH-HHhhccccc---hHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHH
Confidence 45788999999999999999999 433333222 2577899999999999999999999997653 4567899999
Q ss_pred HHhCCCCCcceeHHHHHHHHHc-CCCCCChHHHHHHHhH----HccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQK-GNVGLGRRTMRNSLNM----SMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~-~~~~~~~~~~~~~f~~----~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++.. .+..++...+..+|+. +|.|+||.
T Consensus 82 ~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~ 132 (155)
T 3ll8_B 82 RIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGR 132 (155)
T ss_dssp HHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSS
T ss_pred HHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999988 5777888888888877 99999995
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.7e-13 Score=126.44 Aligned_cols=121 Identities=16% Similarity=0.204 Sum_probs=102.1
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhch--hhHHHHHHHHH-------HHhCCCCCCceeHHHHHHHHH-------
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNK--LEREEHLVAAF-------QYFDKDGSGYITVDELQQACA------- 504 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~--~~~~~~l~~~F-------~~~D~d~dG~I~~~e~~~~l~------- 504 (564)
.++..+|..+|.+++|.|+++||..++..+.. ......+..+| +.+|.|++|.|+.+||..++.
T Consensus 36 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~~~~~ 115 (208)
T 2hpk_A 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAER 115 (208)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhhhh
Confidence 45788999999999999999999988776554 34455666777 999999999999999999875
Q ss_pred --hCC---CCHHH-HHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 505 --EHN---MTDVL-LEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 505 --~~~---~~~~~-~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+. -..++ +..+|..+|.|++|.|+.+||..++...+ ++.+.+..+|+.+|.|+||.
T Consensus 116 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~ 178 (208)
T 2hpk_A 116 ERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGK 178 (208)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--SCTTHHHHHHHHHCTTCCSS
T ss_pred hhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCc
Confidence 322 12333 78899999999999999999999998776 88889999999999999995
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-13 Score=123.54 Aligned_cols=120 Identities=22% Similarity=0.278 Sum_probs=98.5
Q ss_pred HHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHH
Q 008475 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIRE 519 (564)
Q Consensus 442 ~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~ 519 (564)
.+..+|..+|.+++|.|+++||..++..+........+..+|+.+|.+++|.|+.+||..++.... ...+.+..+|..
T Consensus 28 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~ 107 (166)
T 2aao_A 28 GLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTY 107 (166)
T ss_dssp HHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHH
Confidence 467799999999999999999999887765555667789999999999999999999999886542 345778999999
Q ss_pred hCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 520 VDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 520 ~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+|.|++|.|+.+||..++... +++.+.+.++|+.+|.|+||+
T Consensus 108 ~D~d~~G~i~~~e~~~~l~~~--~~~~~~~~~~~~~~d~~~dg~ 149 (166)
T 2aao_A 108 FDKDGSGYITPDELQQACEEF--GVEDVRIEELMRDVDQDNDGR 149 (166)
T ss_dssp HCTTCSSSBCHHHHHHHTCC----------CCHHHHHCTTCSSS
T ss_pred hCCCCCCcCcHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCCCc
Confidence 999999999999999999865 466788999999999999995
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.1e-13 Score=143.73 Aligned_cols=122 Identities=20% Similarity=0.343 Sum_probs=106.6
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhch--------hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC--CCC
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK--------LEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMT 509 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~--------~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~--~~~ 509 (564)
..+++.+|..+|.|+||.|+++||..++..+.. ......+..+|+.+|.|+||.|+.+||..++... ..+
T Consensus 354 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~ 433 (504)
T 3q5i_A 354 RKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFS 433 (504)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTC
T ss_pred HHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccC
Confidence 456788999999999999999999887765532 3456789999999999999999999999988543 257
Q ss_pred HHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 510 DVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 510 ~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
++++..+|..+|.|+||.|+.+||..++.. .+++.+++.++|+.+|.||||.
T Consensus 434 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~ 485 (504)
T 3q5i_A 434 EERLRRAFNLFDTDKSGKITKEELANLFGL--TSISEKTWNDVLGEADQNKDNM 485 (504)
T ss_dssp HHHHHHHHHHHCTTCCSEECHHHHHHHTTC--SCCCHHHHHHHHHTTCSSCSSS
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHhh--CCCCHHHHHHHHHHhCCCCCCc
Confidence 889999999999999999999999999875 4678899999999999999995
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.43 E-value=8.5e-13 Score=123.05 Aligned_cols=139 Identities=15% Similarity=0.180 Sum_probs=109.9
Q ss_pred CCCHHHHHHHHHhhCCCCC-HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHH
Q 008475 421 AITFDELKAGLRRYGSTLK-DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDEL 499 (564)
Q Consensus 421 ~I~~~el~~~l~~~~~~~~-~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~ 499 (564)
.++.+++..+.+..+.... ..++..+|..+|.+++|.|+++||..+. .+..... ...+|+.+|.+++|.|+.+||
T Consensus 8 ~l~~~~~~~l~~~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~---~~~l~~~~d~~~~g~i~~~EF 83 (208)
T 2ct9_A 8 LLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPL---GDRIINAFFSEGEDQVNFRGF 83 (208)
T ss_dssp CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTT---HHHHHHTTSCTTCSCEEHHHH
T ss_pred CCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCc---HHHHHHHHcCCCCCcCcHHHH
Confidence 3778888887776543221 3346778999999999999999998753 2222222 246789999999999999999
Q ss_pred HHHHHhCC-C-----------------CHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC-CCCCChHHHHHH----HhHH
Q 008475 500 QQACAEHN-M-----------------TDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG-NVGLGRRTMRNS----LNMS 556 (564)
Q Consensus 500 ~~~l~~~~-~-----------------~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~-~~~~~~~~~~~~----f~~~ 556 (564)
..++.... . ..+.+..+|..+|.|++|.|+.+||..++... +..++.+++.++ |+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~ 163 (208)
T 2ct9_A 84 MRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEA 163 (208)
T ss_dssp HHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHh
Confidence 99987642 1 45678899999999999999999999999875 777888888777 9999
Q ss_pred ccCCCCC
Q 008475 557 MRDAPGS 563 (564)
Q Consensus 557 D~~~~g~ 563 (564)
|.|+||.
T Consensus 164 D~d~dG~ 170 (208)
T 2ct9_A 164 DQDGDSA 170 (208)
T ss_dssp CSSSSSS
T ss_pred CCCCCCc
Confidence 9999995
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.43 E-value=6e-13 Score=125.84 Aligned_cols=141 Identities=15% Similarity=0.179 Sum_probs=105.6
Q ss_pred CCHHHHHHHHHhhCCCC-CHHHHHHHHHhcCCC--CCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHH
Q 008475 422 ITFDELKAGLRRYGSTL-KDTEIRDLMDAADVD--NSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDE 498 (564)
Q Consensus 422 I~~~el~~~l~~~~~~~-~~~~~~~~~~~~D~~--~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e 498 (564)
++.+++..+....+... .-.++..+|..+|.+ ++|.|+++||..++.. ........+..+|+.+|.|++|.|+.+|
T Consensus 28 l~~~~~~~l~~~~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~E 106 (226)
T 2zfd_A 28 GGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEE 106 (226)
T ss_dssp ----CTHHHHHHSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHH
T ss_pred CCHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHH
Confidence 44466666665443221 123356788899999 9999999999988754 2122234567799999999999999999
Q ss_pred HHHHHHhCC---CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH----cCCCCCChHHH----HHHHhHHccCCCCC
Q 008475 499 LQQACAEHN---MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ----KGNVGLGRRTM----RNSLNMSMRDAPGS 563 (564)
Q Consensus 499 ~~~~l~~~~---~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~----~~~~~~~~~~~----~~~f~~~D~~~~g~ 563 (564)
|..++...+ ...+.+..+|..+|.|++|.|+++||..++. ..+..++.+.+ ..+|+.+|.|+||+
T Consensus 107 f~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~ 182 (226)
T 2zfd_A 107 FARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGK 182 (226)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSE
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCc
Confidence 999998764 3467799999999999999999999999985 44556665554 56778999999994
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=3.6e-13 Score=142.86 Aligned_cols=122 Identities=22% Similarity=0.346 Sum_probs=105.8
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhch--------hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CC
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK--------LEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MT 509 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~--------~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~ 509 (564)
..+++.+|..+|.|+||.|+++||..++..+.. ......+..+|+.+|.|++|.|+.+||..++...+ .+
T Consensus 345 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~ 424 (494)
T 3lij_A 345 TKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS 424 (494)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTC
T ss_pred HHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhcccc
Confidence 456888999999999999999999887765532 34567899999999999999999999999875432 67
Q ss_pred HHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 510 DVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 510 ~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+++..+|..+|.|+||.|+++||..++.. ..++.+++.++|+.+|.||||.
T Consensus 425 ~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~ 476 (494)
T 3lij_A 425 KDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMISGIDSNNDGD 476 (494)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCCHHHHHHHHTTCSSSSSS
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhCCCCCCc
Confidence 889999999999999999999999999875 5678899999999999999995
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-12 Score=117.81 Aligned_cols=120 Identities=24% Similarity=0.352 Sum_probs=102.7
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQY 485 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~ 485 (564)
.+..+|..+|.|++|.|+.+||..++... ..+..+|..+|.+++|.|+.+||..++..+........+..+|+.
T Consensus 43 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 116 (167)
T 1gjy_A 43 TCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKR 116 (167)
T ss_dssp HHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 45678889999999999999999988763 678999999999999999999999988766555566778889998
Q ss_pred hCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeH--HHHHHHH
Q 008475 486 FDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDY--GEFVAMM 537 (564)
Q Consensus 486 ~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~--~eF~~~~ 537 (564)
+ |++|.|+.+||..++.. ...+.++|..+|.|++|.|+. .+|+.+.
T Consensus 117 ~--d~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~~G~i~~~~~~~l~~~ 164 (167)
T 1gjy_A 117 Y--STSGKITFDDYIACCVK----LRALTDSFRRRDSAQQGMVNFSYDDFIQCV 164 (167)
T ss_dssp T--CBTTBEEHHHHHHHHHH----HHHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred h--CcCCcCcHHHHHHHHHH----HHHHHHHHHHhCCCCCeeEEeeHHHHHHHH
Confidence 8 89999999999999864 377889999999999999986 5665544
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.41 E-value=9.9e-13 Score=117.64 Aligned_cols=119 Identities=19% Similarity=0.318 Sum_probs=101.5
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQY 485 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~ 485 (564)
.+..+|..+|.|++|.|+.+||..++... ..+..+|..+|.+++|.|+.+||..++..+........+..+|+.
T Consensus 41 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 114 (165)
T 1k94_A 41 TCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114 (165)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 45778888999999999999999988763 678999999999999999999999988766554566778888988
Q ss_pred hCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 486 FDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 486 ~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
+ |++|.|+.+||..++... +.+.++|..+|.|++|.|+.+ |.+++
T Consensus 115 ~--d~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~i~~~-~~~~l 159 (165)
T 1k94_A 115 Y--SKNGRIFFDDYVACCVKL----RALTDFFRKRDHLQQGSANFI-YDDFL 159 (165)
T ss_dssp H--CBTTBCBHHHHHHHHHHH----HHHHHHHHTTCTTCCSEEEEE-HHHHH
T ss_pred h--CCCCeEcHHHHHHHHHHH----HHHHHHHHHhCCCCCCeEeee-HHHHH
Confidence 8 899999999999998643 788899999999999999765 55544
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=8.3e-13 Score=139.79 Aligned_cols=122 Identities=21% Similarity=0.353 Sum_probs=103.0
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhh----chh-------hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC-
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHL----NKL-------EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN- 507 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~----~~~-------~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~- 507 (564)
.++++.+|..+|.|+||.|+++||...+... ... .....+..+|+.+|.|++|.|+.+||..++....
T Consensus 334 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~ 413 (484)
T 3nyv_A 334 TKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKT 413 (484)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccc
Confidence 3467889999999999999999996554332 111 2267789999999999999999999999886543
Q ss_pred -CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 508 -MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 508 -~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+++++..+|..+|.|+||.|+.+||..++.. ..++.+++.++|+.+|.|+||.
T Consensus 414 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~ 468 (484)
T 3nyv_A 414 LLSRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGE 468 (484)
T ss_dssp HHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHHHHHHCTTCCSE
T ss_pred cCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhcCCCCCc
Confidence 45678999999999999999999999999986 5678899999999999999994
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.7e-12 Score=125.60 Aligned_cols=140 Identities=19% Similarity=0.143 Sum_probs=111.7
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++...+|.|+.+.||++.. .+..+++|+....... ....+.+|+.+++.|..+..++++++++...+..|+||
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred cceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 488888899999999999973 3679999998643211 12357899999999976788999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------------
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS----------------------------------------- 218 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~----------------------------------------- 218 (564)
|+++|.+|.+.+ .+......++.++..+|..||+
T Consensus 90 e~i~G~~l~~~~-----~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
T 3tm0_A 90 SEADGVLCSEEY-----EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF 164 (263)
T ss_dssp ECCSSEEHHHHC-----CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSS
T ss_pred EecCCeehhhcc-----CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccC
Confidence 999999987652 1223345788999999999998
Q ss_pred ------------------CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 219 ------------------LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 219 ------------------~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
..++|+|++|.|||+ +++..+.|+||+.+..
T Consensus 165 ~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~---~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFV---KDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEE---ETTEEEEECCCTTCEE
T ss_pred CCHHHHHHHHHhcCCCCCceEECCCCCcCcEEE---ECCcEEEEEEchhccc
Confidence 448999999999999 4445567999998754
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.40 E-value=5.7e-13 Score=115.96 Aligned_cols=119 Identities=13% Similarity=0.194 Sum_probs=102.9
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~ 517 (564)
.++..+|..+|.+++|.|+.+||..++..+........+..+|.. ++|.|+.+||..++... ....+.+..+|
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 82 (143)
T 3j04_B 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPEDVIRNAF 82 (143)
T ss_dssp HHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 456789999999999999999999988776655555556555554 89999999999998754 24678899999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++...+..++.+++..+|+.+|.|+||.
T Consensus 83 ~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~ 128 (143)
T 3j04_B 83 ACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGN 128 (143)
T ss_dssp TTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSC
T ss_pred HHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCc
Confidence 9999999999999999999999988889999999999999999995
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.40 E-value=1e-12 Score=116.83 Aligned_cols=121 Identities=15% Similarity=0.180 Sum_probs=103.4
Q ss_pred HHHHHHHhcCC--CCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC-----CCCHHHHH
Q 008475 442 EIRDLMDAADV--DNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH-----NMTDVLLE 514 (564)
Q Consensus 442 ~~~~~~~~~D~--~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~-----~~~~~~~~ 514 (564)
+++..|..+|. +++|.|+..||..++..++...++..+..++. .|.+++|.|+++||..++... ....+++.
T Consensus 10 elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~ 88 (159)
T 3i5g_C 10 EVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFM 88 (159)
T ss_dssp HHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHH
T ss_pred HHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccccchHHHHH
Confidence 45778999985 89999999999998877766666666766544 477899999999999988643 24678899
Q ss_pred HHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHcc--CCCCC
Q 008475 515 DIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMR--DAPGS 563 (564)
Q Consensus 515 ~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~--~~~g~ 563 (564)
++|..+|.|++|.|+.+||.+++...+..++.+++.++++.+|. ||||.
T Consensus 89 ~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~ 139 (159)
T 3i5g_C 89 EAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGN 139 (159)
T ss_dssp HHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCC
T ss_pred HHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCe
Confidence 99999999999999999999999999999999999999999995 88884
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=99.39 E-value=2.4e-12 Score=115.13 Aligned_cols=119 Identities=16% Similarity=0.246 Sum_probs=103.4
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhch-hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC--C-CCHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNK-LEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--N-MTDVLLEDI 516 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~-~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~--~-~~~~~~~~~ 516 (564)
.++..+|..+|.+++|.|+.+||..++..+.. ......+..+|... +|.|+.+||..++... + ...+.+..+
T Consensus 25 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~~~~~l~~~ 100 (166)
T 2mys_B 25 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIMGA 100 (166)
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCCcHHHHHHH
Confidence 44678999999999999999999998877665 55666777777754 7999999999988653 1 466889999
Q ss_pred HHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 517 IREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 517 ~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
|..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.|+||.
T Consensus 101 F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~ 147 (166)
T 2mys_B 101 FKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGN 147 (166)
T ss_pred HHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCe
Confidence 99999999999999999999998888889999999999999999995
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-12 Score=119.96 Aligned_cols=120 Identities=23% Similarity=0.347 Sum_probs=103.0
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQY 485 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~ 485 (564)
.+..+|..+|.|++|.|+.+||..++... ..+..+|..+|.+++|.|+.+||..++..+........+..+|+.
T Consensus 74 ~~~~l~~~~D~d~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~ 147 (198)
T 1juo_A 74 TCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR 147 (198)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 45778888999999999999999988763 678999999999999999999999888766554566778899998
Q ss_pred hCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeH--HHHHHHH
Q 008475 486 FDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDY--GEFVAMM 537 (564)
Q Consensus 486 ~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~--~eF~~~~ 537 (564)
+ |++|.|+.+||..++.. ...+.++|+.+|.|++|.|+. ++|+.++
T Consensus 148 ~--d~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~~G~is~~~~~~l~~~ 195 (198)
T 1juo_A 148 Y--STNGKITFDDYIACCVK----LRALTDSFRRRDTAQQGVVNFPYDDFIQCV 195 (198)
T ss_dssp T--CSSSSEEHHHHHHHHHH----HHHHHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred h--CCCCeEcHHHHHHHHHH----HHHHHHHHHHhCCCCCCeEeecHHHHHHHH
Confidence 8 89999999999999864 367889999999999999987 6776654
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=99.39 E-value=2.2e-13 Score=149.96 Aligned_cols=130 Identities=11% Similarity=0.175 Sum_probs=99.1
Q ss_pred HHHhHhhhhh--cccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCC-------CCCCccchhhhHHHHhhhchh
Q 008475 403 EIAGLKEMFK--AMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADV-------DNSGTIDYGEFIAATVHLNKL 473 (564)
Q Consensus 403 ~~~~l~~~F~--~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~-------~~~g~I~~~eF~~~~~~~~~~ 473 (564)
....++++|. .+|.|++|.|+..||..+|+. .+.+++.+++.+|. +++|.|+|+||+.++..+..
T Consensus 144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~~- 217 (799)
T 2zkm_X 144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP- 217 (799)
T ss_dssp HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC-
T ss_pred HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHccC-
Confidence 3456888999 799999999999999999875 37889999999985 78899999999998866532
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC-C-----------CCHHHHHHHHHHhCCC----CCcceeHHHHHHHH
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEH-N-----------MTDVLLEDIIREVDQD----NDGRIDYGEFVAMM 537 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~-~-----------~~~~~~~~~~~~~d~d----~dg~I~~~eF~~~~ 537 (564)
.+.++.+|+.||.+++|+|+.+||+++|... | +++++++++++++|.| +||.|+|+||+.+|
T Consensus 218 --r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L 295 (799)
T 2zkm_X 218 --RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFL 295 (799)
T ss_dssp --CHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHH
T ss_pred --HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcc
Confidence 3568999999999999999999999999876 3 4678899999999998 89999999999999
Q ss_pred HcC
Q 008475 538 QKG 540 (564)
Q Consensus 538 ~~~ 540 (564)
...
T Consensus 296 ~S~ 298 (799)
T 2zkm_X 296 CGP 298 (799)
T ss_dssp HST
T ss_pred cCc
Confidence 864
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.38 E-value=2.7e-13 Score=118.26 Aligned_cols=93 Identities=26% Similarity=0.354 Sum_probs=50.3
Q ss_pred HHHHhcCCCCCCccchhhhHHHHhhhch-----hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC----------CCC
Q 008475 445 DLMDAADVDNSGTIDYGEFIAATVHLNK-----LEREEHLVAAFQYFDKDGSGYITVDELQQACAEH----------NMT 509 (564)
Q Consensus 445 ~~~~~~D~~~~g~I~~~eF~~~~~~~~~-----~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----------~~~ 509 (564)
.+|..+|.|++|.|+++||+..+..... ....+.+..+|+.+|.|++|+|+.+||..++..+ .++
T Consensus 31 ~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s 110 (143)
T 3a4u_B 31 SQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 110 (143)
T ss_dssp --------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CC
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCC
Confidence 3556666666666666666555433211 1234667888999999999999999999988665 267
Q ss_pred HHHHHHHH----HHhCCCCCcceeHHHHHHHH
Q 008475 510 DVLLEDII----REVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 510 ~~~~~~~~----~~~d~d~dg~I~~~eF~~~~ 537 (564)
++++.+++ ..+|.|+||.|+|+||+.+|
T Consensus 111 ~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 111 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred HHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 77775544 99999999999999999765
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
Probab=99.38 E-value=5.1e-13 Score=121.96 Aligned_cols=122 Identities=16% Similarity=0.172 Sum_probs=97.8
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhh------chhhHHHHHHHH---------HHHhCCCCCCceeHHHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHL------NKLEREEHLVAA---------FQYFDKDGSGYITVDELQQACA 504 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~------~~~~~~~~l~~~---------F~~~D~d~dG~I~~~e~~~~l~ 504 (564)
..+++.+|..+|.+++|.|+++||..++..+ ........+..+ |+.+|.|++|.|+.+| .++.
T Consensus 13 ~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E--~~~~ 90 (186)
T 2hps_A 13 LRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT--DSLL 90 (186)
T ss_dssp HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH--HHHH
T ss_pred HHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH--HHHH
Confidence 3457889999999999999999999887654 333445556555 7999999999999999 5665
Q ss_pred hCCCCHH---HHHHHH--HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 505 EHNMTDV---LLEDII--REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 505 ~~~~~~~---~~~~~~--~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
....... ++...| ..+|.|++|.|+++||..++...+..++.+.+.++|+.+|.|+||+
T Consensus 91 ~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~ 154 (186)
T 2hps_A 91 KMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQ 154 (186)
T ss_dssp HCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSE
T ss_pred HhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCc
Confidence 5543222 333333 6679999999999999999998877789999999999999999994
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.2e-12 Score=113.59 Aligned_cols=118 Identities=13% Similarity=0.070 Sum_probs=101.9
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--C---CHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--M---TDVLLED 515 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~---~~~~~~~ 515 (564)
.+++.+|..+|.+++|.|+++||..++..+........+..+|. +++|.|+.+||..++.... . ....+..
T Consensus 5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~ 80 (140)
T 1ggw_A 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHHH
Confidence 45788999999999999999999998876655555666666666 8999999999999986643 1 2478999
Q ss_pred HHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 516 IIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 516 ~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+|..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|. +||.
T Consensus 81 ~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~ 127 (140)
T 1ggw_A 81 GFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGM 127 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCC
T ss_pred HHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCc
Confidence 9999999999999999999999988888899999999999999 9995
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.9e-12 Score=116.69 Aligned_cols=119 Identities=17% Similarity=0.209 Sum_probs=98.7
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhc----hhhHHHH-H--------HHHHHHhCCCCCCceeHHHHHHHHHhCC
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLN----KLEREEH-L--------VAAFQYFDKDGSGYITVDELQQACAEHN 507 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~----~~~~~~~-l--------~~~F~~~D~d~dG~I~~~e~~~~l~~~~ 507 (564)
.+++.+|..+|.+++|.|+.+||..++..+. ....... + ..+|+.+| ++|.|+.+||..++....
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~~ 83 (174)
T 1q80_A 6 QKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEMV 83 (174)
T ss_dssp HHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHHc
Confidence 4578899999999999999999998876554 2222222 3 46788888 999999999999886542
Q ss_pred C-------CHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 508 M-------TDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 508 ~-------~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
. ....+..+|..+|.|++|.|+.+||..++... +++.+.+..+|+.+|.|+||.
T Consensus 84 ~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~--g~~~~~~~~~~~~~D~d~dg~ 144 (174)
T 1q80_A 84 KNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML--GLDKTMAPASFDAIDTNNDGL 144 (174)
T ss_dssp TSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH--TCCGGGHHHHHHHHCTTCSSS
T ss_pred CcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCCce
Confidence 1 23678999999999999999999999999877 478889999999999999995
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=4.5e-13 Score=141.87 Aligned_cols=124 Identities=16% Similarity=0.347 Sum_probs=88.8
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhch--------------hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK--------------LEREEHLVAAFQYFDKDGSGYITVDELQQACAE 505 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~--------------~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~ 505 (564)
..+++.+|..+|.|+||.|+++||...+..... ......+..+|+.+|.|+||.|+.+||..++..
T Consensus 330 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~ 409 (486)
T 3mwu_A 330 TKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAID 409 (486)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSC
T ss_pred HHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHh
Confidence 466888999999999999999999765543211 122677899999999999999999999988754
Q ss_pred C--CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 506 H--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 506 ~--~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
. ....+.+..+|..+|.|+||.|+.+||..++...+..++.+++.++|+.+|.|+||.
T Consensus 410 ~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~ 469 (486)
T 3mwu_A 410 RTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGE 469 (486)
T ss_dssp TTTTCCHHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSS
T ss_pred hhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCc
Confidence 3 367889999999999999999999999999998887788899999999999999995
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.35 E-value=5.2e-12 Score=111.70 Aligned_cols=118 Identities=12% Similarity=0.273 Sum_probs=101.9
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~ 517 (564)
.++..+|..+|.+++|.|+++||..++..+........+..+|+ +++|.|+.+||..++... ....+.+..+|
T Consensus 18 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 93 (156)
T 1wdc_B 18 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAF 93 (156)
T ss_dssp HHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 44678999999999999999999998877655555666666664 588999999999998653 25678899999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.| ||.
T Consensus 94 ~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~ 138 (156)
T 1wdc_B 94 AMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGK 138 (156)
T ss_dssp HTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTE
T ss_pred HHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCE
Confidence 999999999999999999999988888999999999999999 984
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.6e-14 Score=132.85 Aligned_cols=123 Identities=17% Similarity=0.144 Sum_probs=95.6
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhh-hchhhH----HHHHHHHHHHh-----CCCCCCceeHHHHHHHHHhCC--C
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLER----EEHLVAAFQYF-----DKDGSGYITVDELQQACAEHN--M 508 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~-~~~~~~----~~~l~~~F~~~-----D~d~dG~I~~~e~~~~l~~~~--~ 508 (564)
.++..+|..+|.+++|.|+++||..++.. +..... ...+..+|..+ |.|++|.|+++||..++.... .
T Consensus 48 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~~~~~~~~ 127 (219)
T 3cs1_A 48 QRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIY 127 (219)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHHHHhccc
Confidence 44678999999999999999999887654 332222 22333344332 348999999999998864332 2
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC-CCChHHHHHHHhHHccCCCCC
Q 008475 509 TDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV-GLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 509 ~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~-~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+.+..+|..+|.|++|.|+.+||..++...+. .++.+++..+|+.+|.|+||+
T Consensus 128 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~ 183 (219)
T 3cs1_A 128 DFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGS 183 (219)
T ss_dssp HHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSE
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCc
Confidence 4567899999999999999999999999987765 677788999999999999994
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-12 Score=113.43 Aligned_cols=85 Identities=22% Similarity=0.364 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHH
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRN 551 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~ 551 (564)
.....++.+|+.+|.|++|.|+.+||+.++..+| ++++++.++|..+|.|++|.|+|+||+.++... .+.+.+
T Consensus 45 ~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~~ 119 (147)
T 1wy9_A 45 SKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAILR 119 (147)
T ss_dssp HHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGGG
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHHH
Confidence 3456689999999999999999999999999887 789999999999999999999999999999654 567899
Q ss_pred HHhHHccCCCCC
Q 008475 552 SLNMSMRDAPGS 563 (564)
Q Consensus 552 ~f~~~D~~~~g~ 563 (564)
+|+.||.+|+|+
T Consensus 120 aF~~~D~d~~g~ 131 (147)
T 1wy9_A 120 MILMYEEKNKEH 131 (147)
T ss_dssp GGGGCCCC----
T ss_pred HHHHHccCCCCC
Confidence 999999999996
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.34 E-value=3.1e-13 Score=127.77 Aligned_cols=124 Identities=16% Similarity=0.172 Sum_probs=94.9
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhh-hchhhH----HHHHHHHHHHh-----CCCCCCceeHHHHHHHHHhCC--
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLER----EEHLVAAFQYF-----DKDGSGYITVDELQQACAEHN-- 507 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~-~~~~~~----~~~l~~~F~~~-----D~d~dG~I~~~e~~~~l~~~~-- 507 (564)
..++..+|..+|.+++|.|+++||...+.. +..... ...+..+|..+ |.|++|.|+++||..++....
T Consensus 50 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~ 129 (226)
T 2lvv_A 50 KSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYI 129 (226)
T ss_dssp HHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHhc
Confidence 345678999999999999999999984433 222222 34455556665 999999999999998643221
Q ss_pred CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC-CCChHHHHHHHhHHccCCCCC
Q 008475 508 MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV-GLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 508 ~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~-~~~~~~~~~~f~~~D~~~~g~ 563 (564)
...+.+..+|..+|.|++|.|+.+||..++..... +.+.+++..+|+.+|.|+||+
T Consensus 130 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~ 186 (226)
T 2lvv_A 130 YDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGV 186 (226)
T ss_dssp HHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSC
T ss_pred cCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCc
Confidence 23467899999999999999999999999986521 344456899999999999995
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=99.33 E-value=4.1e-12 Score=117.22 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=105.1
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDI 516 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~ 516 (564)
..++..+|..+|.+++|.|+.+||..++..+........+..+|..+ +|.|+++||..++... ....+.+..+
T Consensus 56 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~~ 131 (196)
T 3dtp_E 56 VQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIVNA 131 (196)
T ss_dssp HHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 45678899999999999999999999888776556677787888776 8999999999999753 2567889999
Q ss_pred HHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 517 IREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 517 ~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
|..+|.|++|.|+.+||..++ ..+..++.+.+..+|+.+|.|+||.
T Consensus 132 F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~ 177 (196)
T 3dtp_E 132 FNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGL 177 (196)
T ss_dssp HHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEE
T ss_pred HHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCE
Confidence 999999999999999999999 8888899999999999999999994
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=9e-13 Score=109.91 Aligned_cols=85 Identities=20% Similarity=0.431 Sum_probs=69.0
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHh-----CC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC------
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAE-----HN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV------ 542 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~-----~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~------ 542 (564)
.+.+..+|..||.| +|+|+.+||+.+|+. ++ .++++++++|+.+|.|+||.|+|+||+.+|..+..
T Consensus 14 ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~~he~f 92 (121)
T 4drw_A 14 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACNDYF 92 (121)
T ss_dssp HHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHHHHH
Confidence 46788999999988 899999999999975 34 68899999999999999999999999999876421
Q ss_pred -------C---CChHHHHHHHhHHccCCC
Q 008475 543 -------G---LGRRTMRNSLNMSMRDAP 561 (564)
Q Consensus 543 -------~---~~~~~~~~~f~~~D~~~~ 561 (564)
+ ..+..+.++|+++|.|||
T Consensus 93 ~~~~k~~~~~~~~d~~~~e~~~~~d~~gd 121 (121)
T 4drw_A 93 VVHMKQENLYFQGDSTVHEILSKLSLEGD 121 (121)
T ss_dssp TTSCC---------CCHHHHHHHCCC---
T ss_pred HHHHHHhccCCCCchHHHHHHHHhcccCC
Confidence 1 135669999999999997
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.5e-12 Score=105.63 Aligned_cols=71 Identities=28% Similarity=0.577 Sum_probs=67.3
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 467 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~ 467 (564)
..++++++..++++|+.+|.|++|+|+.+||+.+++.+|..++..+++.+|..+|.|++|.|+|+||+.++
T Consensus 28 ~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 28 VDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp CCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 35788889999999999999999999999999999999999999999999999999999999999999865
|
| >1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-11 Score=116.05 Aligned_cols=137 Identities=13% Similarity=0.158 Sum_probs=106.8
Q ss_pred HHHHHhHhhhhhcccCC-CCCCCCHHHHHHHHHhhCC--------CCC-----HHHHHHHHHhcCCCCCCccchhhhHHH
Q 008475 401 EEEIAGLKEMFKAMDTD-NSGAITFDELKAGLRRYGS--------TLK-----DTEIRDLMDAADVDNSGTIDYGEFIAA 466 (564)
Q Consensus 401 ~~~~~~l~~~F~~~D~d-~~G~I~~~el~~~l~~~~~--------~~~-----~~~~~~~~~~~D~~~~g~I~~~eF~~~ 466 (564)
.-++..+.++|+....+ ++..++..++..+|..+-. ... +.-+..+|..+|.+++|.|+|.||+.+
T Consensus 78 lv~l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~a 157 (261)
T 1eg3_A 78 LLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTG 157 (261)
T ss_dssp GCCHHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHH
T ss_pred eeeHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHH
Confidence 33455566677665433 5567899998877654311 112 222456999999999999999999999
Q ss_pred HhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHh-------CC--------CCHHHHHHHHHHhCCCCCcceeHH
Q 008475 467 TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE-------HN--------MTDVLLEDIIREVDQDNDGRIDYG 531 (564)
Q Consensus 467 ~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~-------~~--------~~~~~~~~~~~~~d~d~dg~I~~~ 531 (564)
++-+.....+++++.+|+.|| |++|+|+.+|+..+++. +| -.++.++.+|+.+| +||.|+.+
T Consensus 158 Ls~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~ 234 (261)
T 1eg3_A 158 IISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAA 234 (261)
T ss_dssp HHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHH
T ss_pred HHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHH
Confidence 988888888999999999999 99999999999998854 22 23667899999996 78999999
Q ss_pred HHHHHHHcC
Q 008475 532 EFVAMMQKG 540 (564)
Q Consensus 532 eF~~~~~~~ 540 (564)
||++.+..-
T Consensus 235 EFl~~~~~d 243 (261)
T 1eg3_A 235 LFLDWMRLE 243 (261)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhC
Confidence 999988754
|
| >2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-13 Score=115.58 Aligned_cols=103 Identities=21% Similarity=0.278 Sum_probs=55.7
Q ss_pred HHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHH-----HHhhhc-hhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 008475 431 LRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIA-----ATVHLN-KLEREEHLVAAFQYFDKDGSGYITVDELQQACA 504 (564)
Q Consensus 431 l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~-----~~~~~~-~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~ 504 (564)
++.+|.+++..++..++..+ +|.|+|+||+. ++.... .......++.+|+.+| |+|+.+||+.+++
T Consensus 2 lr~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~ 73 (123)
T 2kld_A 2 STAIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLK 73 (123)
T ss_dssp -----------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTT
T ss_pred hhhcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHH
Confidence 56788899999999998876 78999999998 554322 2233456788999998 9999999999999
Q ss_pred hCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 505 EHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 505 ~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
.+|.+++++++++..+|.|+||.|+|+||+.++....
T Consensus 74 ~lG~t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 74 GKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLE 110 (123)
T ss_dssp TCCSSHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred HhCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 9998999999999999999999999999999887653
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.27 E-value=1.2e-11 Score=109.08 Aligned_cols=117 Identities=15% Similarity=0.229 Sum_probs=99.9
Q ss_pred HHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHHH
Q 008475 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDIIR 518 (564)
Q Consensus 442 ~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~~ 518 (564)
+++..|..+|.+++|.|+.+||..++..+........+..++ .+++|.|+..+|..++...- -+++++.++|.
T Consensus 17 elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~----~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~aF~ 92 (153)
T 3i5g_B 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML----KECPGQLNFTAFLTLFGEKVSGTDPEDALRNAFS 92 (153)
T ss_dssp HHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHH----HTSSSCCCSHHHHHTTTTTTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHH----HhccCCccHHHHHHHHHhhhcccccHHHHHHHHh
Confidence 467789999999999999999999888777666666555544 36778999999988875432 35788999999
Q ss_pred HhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 519 EVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 519 ~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+|.|++|.|+.+|+..++...+..++.+++.++|+.+|.+ ||.
T Consensus 93 ~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~ 136 (153)
T 3i5g_B 93 MFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQ 136 (153)
T ss_dssp TTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTE
T ss_pred ccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCE
Confidence 99999999999999999999999999999999999999988 883
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.3e-12 Score=105.25 Aligned_cols=70 Identities=16% Similarity=0.316 Sum_probs=63.1
Q ss_pred HHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHh-----hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc
Q 008475 401 EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR-----YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN 471 (564)
Q Consensus 401 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~ 471 (564)
++.++.|..+|+.+|.| +|+|+.+||+.+++. ++...+..+++.+++.+|.|+||.|+|+||+.++..+.
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~ 85 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT 85 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 45578899999999998 899999999999976 78888999999999999999999999999999886543
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.27 E-value=5.1e-12 Score=110.67 Aligned_cols=89 Identities=15% Similarity=0.313 Sum_probs=77.3
Q ss_pred HHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHH
Q 008475 401 EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 480 (564)
Q Consensus 401 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~ 480 (564)
.+++..++.+|..+|.|++|.|+.+||..++..+|..++..++..+|..+|.+++|.|+|+||+.++... ...+.
T Consensus 44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~ 118 (147)
T 1wy9_A 44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAIL 118 (147)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGG
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence 5788899999999999999999999999999999999999999999999999999999999999988643 33477
Q ss_pred HHHHHhCCCCCCce
Q 008475 481 AAFQYFDKDGSGYI 494 (564)
Q Consensus 481 ~~F~~~D~d~dG~I 494 (564)
.+|+.+|.+++|..
T Consensus 119 ~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 119 RMILMYEEKNKEHK 132 (147)
T ss_dssp GGGGGCCCC-----
T ss_pred HHHHHHccCCCCCC
Confidence 89999999999984
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=4.6e-12 Score=102.69 Aligned_cols=64 Identities=39% Similarity=0.688 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
....++++|+.+|+|++|+|+.+||+.+|+.+| +++++++++|..+|.|+||.|+|+||+++|.
T Consensus 34 ~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 34 ELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp GHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 356689999999999999999999999999887 7899999999999999999999999999874
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.26 E-value=6.9e-12 Score=117.37 Aligned_cols=137 Identities=15% Similarity=0.129 Sum_probs=99.6
Q ss_pred CCCHHHHHHHHHhhCCCCCHHHHHH---HHHhcCC-----CC-C--CccchhhhHHHHhhhchhhHHHHHHHHHHHhCCC
Q 008475 421 AITFDELKAGLRRYGSTLKDTEIRD---LMDAADV-----DN-S--GTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKD 489 (564)
Q Consensus 421 ~I~~~el~~~l~~~~~~~~~~~~~~---~~~~~D~-----~~-~--g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d 489 (564)
.++.+++..+... ..++..+++. .|..+|. ++ + |.|+.+||.. +..+..... ...+|+.+|.|
T Consensus 30 ~l~~e~l~~l~~~--t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~---~~~lf~~~D~d 103 (214)
T 2l4h_A 30 RLSKELLAEYQDL--TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPF---KERICRVFSTS 103 (214)
T ss_dssp -CCHHHHHHHHSC--CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTT---HHHHHHHHCCS
T ss_pred CCCHHHHHHHHHh--CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChH---HHHHHHHhCcC
Confidence 3555555543332 2344555544 4556666 45 5 9999999987 433332222 34679999999
Q ss_pred CCCc-eeHHHHHHHHHhCC---CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC-----CCChHHHH----HHHhHH
Q 008475 490 GSGY-ITVDELQQACAEHN---MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV-----GLGRRTMR----NSLNMS 556 (564)
Q Consensus 490 ~dG~-I~~~e~~~~l~~~~---~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~-----~~~~~~~~----~~f~~~ 556 (564)
++|. |+++||..++.... ..++.+..+|..+|.|++|.|+.+||..++...+. .++.+++. ++|+.+
T Consensus 104 ~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~ 183 (214)
T 2l4h_A 104 PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEES 183 (214)
T ss_dssp SSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHH
T ss_pred CCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHh
Confidence 9999 99999999987653 23568999999999999999999999999887643 45656655 499999
Q ss_pred ccCCCCC
Q 008475 557 MRDAPGS 563 (564)
Q Consensus 557 D~~~~g~ 563 (564)
|.|+||.
T Consensus 184 D~d~dG~ 190 (214)
T 2l4h_A 184 DIDRDGT 190 (214)
T ss_dssp CCSCCSS
T ss_pred CCCCCCc
Confidence 9999995
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.9e-11 Score=106.64 Aligned_cols=116 Identities=9% Similarity=0.067 Sum_probs=102.6
Q ss_pred HHHHHHHhcCCCC-CCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHH
Q 008475 442 EIRDLMDAADVDN-SGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDII 517 (564)
Q Consensus 442 ~~~~~~~~~D~~~-~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~ 517 (564)
+++.+|..+|.++ +|.|+.+||..++..+........+..+|+.+|.+ |+.+||..++... ....+.+..+|
T Consensus 15 ~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l~~~F 90 (146)
T 2qac_A 15 DESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEELIKMF 90 (146)
T ss_dssp CHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHHHHHH
T ss_pred HHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHHHHHH
Confidence 4688999999999 99999999999887766556677889999999877 9999999998753 24678899999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.|++|.|+.+||..++...+..++.+++..+|+.+ |+||+
T Consensus 91 ~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~ 134 (146)
T 2qac_A 91 AHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDN 134 (146)
T ss_dssp HTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSE
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCc
Confidence 999999999999999999999988888999999999999 88884
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.5e-11 Score=109.07 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=103.5
Q ss_pred CHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhC---CCCCCceeHHHH
Q 008475 423 TFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFD---KDGSGYITVDEL 499 (564)
Q Consensus 423 ~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D---~d~dG~I~~~e~ 499 (564)
+.+++..+...... ....+++..|..+| ++|.|+.+||...+ .. ......+..+|..+| .+++|.|+.+||
T Consensus 11 ~~~~l~~~~~~~~~-~~~~~~~~~F~~~D--~dG~I~~~el~~~l-g~--~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef 84 (179)
T 3a8r_A 11 ALKGLQFVTAKVGN-DGWAAVEKRFNQLQ--VDGVLLRSRFGKCI-GM--DGSDEFAVQMFDSLARKRGIVKQVLTKDEL 84 (179)
T ss_dssp HHHHHHHHHHHHCC-CCHHHHHHHHHHHC--BTTBEEGGGHHHHH-TC--CSCHHHHHHHHHHHHHHHTCCSSEECHHHH
T ss_pred hHHHHHHHHhccch-hhHHHHHHHHhccC--CCCCCcHHHHHHHH-CC--CCcHHHHHHHHHHHHHhccCCCCCcCHHHH
Confidence 44566655544432 45678888999999 79999999998854 22 223445666777666 578899999999
Q ss_pred HHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH-cCCCC-C------ChHHHHHHHhHHccCCCCC
Q 008475 500 QQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ-KGNVG-L------GRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 500 ~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~-~~~~~-~------~~~~~~~~f~~~D~~~~g~ 563 (564)
..++..+. -..+++..+|..+|.|+||.|+.+||..++. ..+.. . +.+.+.++|+.+|.||||+
T Consensus 85 ~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~ 158 (179)
T 3a8r_A 85 KDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGY 158 (179)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCc
Confidence 98876542 3467799999999999999999999999997 55444 3 6678999999999999994
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.23 E-value=1.9e-11 Score=117.88 Aligned_cols=134 Identities=15% Similarity=0.147 Sum_probs=98.7
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCC-ccEEEEEEecCCeEEEEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN-IVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n-iv~~~~~~~~~~~~~lv~ 179 (564)
|.+..+.+.|..+.||++. ..+|..+++|+.... ....+..|+.+++.+..+.- +++++++....+..++||
T Consensus 22 ~~~~~~~~gg~~~~v~~~~-~~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 22 YDWAQQTIGCSDAAVFRLS-AQGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp CEEEECSCTTSSCEEEEEE-CTTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred CceEecccCCCCceEEEEe-cCCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 4454444567779999996 356778999987543 12357789999999985522 667999888888899999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---------------------------------------
Q 008475 180 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG--------------------------------------- 220 (564)
Q Consensus 180 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--------------------------------------- 220 (564)
||++|.+|. . .... ...++.+++.+|..||+..
T Consensus 95 e~i~G~~l~--~---~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 95 GEVPGQDLL--S---SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp ECCSSEETT--T---SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred EecCCcccC--c---CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 999998884 1 1122 2356677777777777653
Q ss_pred -------------------CEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 221 -------------------VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 221 -------------------iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
++|+|++|.|||+ +++..+.|+|||.+..
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~---~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMV---ENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEE---ETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEE---ECCcEEEEEcchhccc
Confidence 9999999999999 4445567999998764
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.8e-12 Score=101.36 Aligned_cols=83 Identities=34% Similarity=0.526 Sum_probs=68.3
Q ss_pred CCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeH
Q 008475 453 DNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDY 530 (564)
Q Consensus 453 ~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~ 530 (564)
|++|.|+|+|+.. ...+.. .....++.+|+.+|.+++|.|+.+||+.+++.+| ++++++..+|..+|.|++|.|+|
T Consensus 1 ~~~G~i~~~e~~~-~~~l~~-~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~ 78 (87)
T 1s6j_A 1 HSSGHIDDDDKHM-AERLSE-EEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78 (87)
T ss_dssp CCSSSSSSHHHHS-SSSSCS-SSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECH
T ss_pred CCCCccCccHHHH-HHHCCH-HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcH
Confidence 5789999999422 112221 2234578999999999999999999999999987 78999999999999999999999
Q ss_pred HHHHHHH
Q 008475 531 GEFVAMM 537 (564)
Q Consensus 531 ~eF~~~~ 537 (564)
+||+.++
T Consensus 79 ~eF~~~~ 85 (87)
T 1s6j_A 79 GEFIAAT 85 (87)
T ss_dssp HHHTTCC
T ss_pred HHHHHHH
Confidence 9998754
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.23 E-value=9.5e-12 Score=109.39 Aligned_cols=90 Identities=19% Similarity=0.351 Sum_probs=72.9
Q ss_pred HHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHH
Q 008475 401 EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLV 480 (564)
Q Consensus 401 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~ 480 (564)
.++...++.+|..+|.|++|+|+.+||..++..++..++..+++.+|..+|.+++|.|+|+||+.++... ...+.
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~ 120 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVL 120 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHH
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence 4667889999999999999999999999999999999999999999999999999999999999988654 33478
Q ss_pred HHHHHhCCCCCCcee
Q 008475 481 AAFQYFDKDGSGYIT 495 (564)
Q Consensus 481 ~~F~~~D~d~dG~I~ 495 (564)
.+|+.+|.+++|.-.
T Consensus 121 ~aF~~~D~d~~G~~~ 135 (150)
T 2jjz_A 121 KLVMMFEGKANESSP 135 (150)
T ss_dssp HHHHC----------
T ss_pred HHHHHHcCCCCCCCC
Confidence 999999999999843
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2e-11 Score=111.10 Aligned_cols=117 Identities=13% Similarity=0.146 Sum_probs=94.3
Q ss_pred HHHHHHhcCC-----CC-C--CccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCc-eeHHHHHHHHHhCC---CCH
Q 008475 443 IRDLMDAADV-----DN-S--GTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGY-ITVDELQQACAEHN---MTD 510 (564)
Q Consensus 443 ~~~~~~~~D~-----~~-~--g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~-I~~~e~~~~l~~~~---~~~ 510 (564)
+..+|..+|. ++ + |.|+.+||.. +..+...... ..+|+.+|.+++|. |+.+||..++.... ...
T Consensus 22 l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~---~~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~ 97 (183)
T 1dgu_A 22 AHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFK---ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPD 97 (183)
T ss_dssp HHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTH---HHHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHH
T ss_pred HHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHH---HHHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHH
Confidence 4668888898 67 8 9999999988 5544433332 36788899999999 99999999987543 235
Q ss_pred HHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC-----CCChHHHHH----HHhHHccCCCCC
Q 008475 511 VLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV-----GLGRRTMRN----SLNMSMRDAPGS 563 (564)
Q Consensus 511 ~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~-----~~~~~~~~~----~f~~~D~~~~g~ 563 (564)
+.+..+|..+|.|++|.|+.+||..++...+. .++.+++.. +|+.+|.|+||.
T Consensus 98 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~ 159 (183)
T 1dgu_A 98 IKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 159 (183)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSE
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCe
Confidence 68999999999999999999999999987654 455566664 999999999994
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.20 E-value=2.4e-11 Score=133.59 Aligned_cols=124 Identities=20% Similarity=0.203 Sum_probs=108.6
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQY 485 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~ 485 (564)
.+..+|..+|.|++|.|+.+||..++..+ .++..+|..+|.|++|.|+.+||..++..+......+.+..+|+.
T Consensus 576 ~~~~l~~~~D~d~~G~I~f~EF~~l~~~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~ 649 (714)
T 3bow_A 576 TCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVAR 649 (714)
T ss_dssp HHHHHHHHHCCSSCSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 35678888999999999999999999865 779999999999999999999999988776555567789999999
Q ss_pred hCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 486 FDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 486 ~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
+| |+||.|+.+||..++.. .+.+.++|..+|.|++|.|+++|+..++..+
T Consensus 650 ~D-d~dG~Isf~EF~~~l~~----~~~l~~~F~~~D~d~dG~Is~~el~~l~~~~ 699 (714)
T 3bow_A 650 FA-DDELIIDFDNFVRCLVR----LEILFKIFKQLDPENTGTIQLDLISWLSFSV 699 (714)
T ss_dssp HS-CTTCEECHHHHHHHHHH----HHHHHHHHSSSCSSCCSEEEEEHHHHHHHHH
T ss_pred hC-CCCCeEcHHHHHHHHHH----HHHHHHHHHHhCCCCCCcEEHHHHHHHHHHH
Confidence 99 99999999999999863 4688899999999999999999887665543
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.19 E-value=2.3e-11 Score=95.76 Aligned_cols=75 Identities=29% Similarity=0.489 Sum_probs=66.9
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN 471 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~ 471 (564)
...+++++..+++.+|+.+|.|++|+|+.+||..++..++ .++..++..+|..+|.+++|.|+|+||+.++....
T Consensus 2 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 76 (86)
T 2opo_A 2 AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR 76 (86)
T ss_dssp ----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT
T ss_pred CccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCc
Confidence 3567888999999999999999999999999999999999 99999999999999999999999999998876543
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=5.5e-11 Score=130.82 Aligned_cols=128 Identities=9% Similarity=0.198 Sum_probs=111.6
Q ss_pred HhHhhhhhc--ccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC-------CCCccchhhhHHHHhhhchhhH
Q 008475 405 AGLKEMFKA--MDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD-------NSGTIDYGEFIAATVHLNKLER 475 (564)
Q Consensus 405 ~~l~~~F~~--~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~-------~~g~I~~~eF~~~~~~~~~~~~ 475 (564)
..++++|.. +|.|++|.|+..|+..+++. ...++..+|+.+|.+ ++|.|+|+||...+..+..
T Consensus 150 ~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~--- 221 (885)
T 3ohm_B 150 TFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL--- 221 (885)
T ss_dssp HHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC---
T ss_pred HHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC---
Confidence 467788887 89999999999999998875 367889999999987 7889999999998876543
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC------------CCHHHHHHHHHHhCCC----CCcceeHHHHHHHHHc
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN------------MTDVLLEDIIREVDQD----NDGRIDYGEFVAMMQK 539 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~------------~~~~~~~~~~~~~d~d----~dg~I~~~eF~~~~~~ 539 (564)
...++.+|+.||.+++|.|+.+||+++|...+ ++.+++.++|+.++.+ ++|.|++++|..+|..
T Consensus 222 R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S 301 (885)
T 3ohm_B 222 RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGG 301 (885)
T ss_dssp CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence 34689999999999999999999999998753 4678999999999998 7899999999999986
Q ss_pred C
Q 008475 540 G 540 (564)
Q Consensus 540 ~ 540 (564)
.
T Consensus 302 ~ 302 (885)
T 3ohm_B 302 E 302 (885)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.17 E-value=6.3e-11 Score=94.54 Aligned_cols=86 Identities=28% Similarity=0.496 Sum_probs=73.3
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh---hH
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL---ER 475 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~---~~ 475 (564)
.++++...++.+|+.+|.+++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+.++...... ..
T Consensus 3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~ 82 (92)
T 2kn2_A 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNG 82 (92)
T ss_dssp CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHH
T ss_pred CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCch
Confidence 345677789999999999999999999999999999999999999999999999999999999999887654332 23
Q ss_pred HHHHHHHHH
Q 008475 476 EEHLVAAFQ 484 (564)
Q Consensus 476 ~~~l~~~F~ 484 (564)
.+.++.+|+
T Consensus 83 ~~~l~~aF~ 91 (92)
T 2kn2_A 83 WSRLRRKFS 91 (92)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 455666664
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.16 E-value=6.7e-11 Score=97.70 Aligned_cols=95 Identities=18% Similarity=0.261 Sum_probs=80.8
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh---chhhHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL---NKLEREEHLVAA 482 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~---~~~~~~~~l~~~ 482 (564)
.+.++|+.+| ++|.|+.+||..++.. ......++..+|..+|.+++|.|+.+||..++..+ ........+..+
T Consensus 11 ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~ 86 (109)
T 3fs7_A 11 DIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAF 86 (109)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHH
T ss_pred HHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHH
Confidence 3566677777 8999999999998864 34568889999999999999999999999887766 444567789999
Q ss_pred HHHhCCCCCCceeHHHHHHHHH
Q 008475 483 FQYFDKDGSGYITVDELQQACA 504 (564)
Q Consensus 483 F~~~D~d~dG~I~~~e~~~~l~ 504 (564)
|+.+|.|++|.|+.+||..+++
T Consensus 87 ~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 87 LAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHT
T ss_pred HHHhCCCCCCcCcHHHHHHHHh
Confidence 9999999999999999998874
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.16 E-value=9.1e-11 Score=116.05 Aligned_cols=185 Identities=16% Similarity=0.199 Sum_probs=126.4
Q ss_pred cccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCC--ccEEEEEEecCC---eEEEE
Q 008475 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKN--IVTIKGAYEDSL---CVHIV 178 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n--iv~~~~~~~~~~---~~~lv 178 (564)
.+.++.|....||++. ..+++|+... ......+.+|..+|+.+..+.. +++++....... ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~-----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKH-----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESS-----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCC-----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 3458999999999864 4688997642 2445678999999999854433 445655543333 35889
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS---------------------------------------- 218 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~---------------------------------------- 218 (564)
|++++|.+|..... ..++..+...++.+++..|..||+
T Consensus 95 m~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp EECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred EcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 99999988875433 347788888889999998888886
Q ss_pred ------------------CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCceecccCCCcccchhhhh---hc
Q 008475 219 ------------------LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL---KH 277 (564)
Q Consensus 219 ------------------~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~ 277 (564)
..++|+|++|.||++... ....+.|+||+.+....+............-.+|+... ..
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~-~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE-KNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT-TTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC-CCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 136999999999999421 14568899999987654322111111100003344332 22
Q ss_pred CCC------------cchHHHHHHHHHHHHhCCCCC
Q 008475 278 YGP------------EADVWTAGVILYILLSGVPPF 301 (564)
Q Consensus 278 ~~~------------~~DvwSlG~il~elltg~~pf 301 (564)
|.. ..+.|++|.++|.+.+|..+|
T Consensus 252 Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 322 258999999999999998876
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.7e-10 Score=92.07 Aligned_cols=81 Identities=40% Similarity=0.660 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCC---ChHH
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGL---GRRT 548 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~---~~~~ 548 (564)
.....+..+|+.+|.|++|.|+.+||..++..+| ++++++.++|..+|.|++|.|+|+||+.++....... ..+.
T Consensus 6 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~ 85 (92)
T 2kn2_A 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGWSR 85 (92)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHHHHH
T ss_pred cHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCchHHH
Confidence 3456789999999999999999999999999987 7899999999999999999999999999887663332 2366
Q ss_pred HHHHHh
Q 008475 549 MRNSLN 554 (564)
Q Consensus 549 ~~~~f~ 554 (564)
++.+|+
T Consensus 86 l~~aF~ 91 (92)
T 2kn2_A 86 LRRKFS 91 (92)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 777774
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.6e-10 Score=95.44 Aligned_cols=101 Identities=18% Similarity=0.281 Sum_probs=83.8
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh---chhh
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL---NKLE 474 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~---~~~~ 474 (564)
.++.++ +.++|+.+|. +|.|+.+||..++.. ......++..+|..+|.+++|.|+.+||..++..+ ....
T Consensus 5 ~~s~~e---i~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~ 77 (109)
T 5pal_A 5 VLKADD---INKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77 (109)
T ss_dssp TSCHHH---HHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred cCCHHH---HHHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCC
Confidence 345444 5666777776 899999999998864 34468889999999999999999999999888766 4445
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAE 505 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~ 505 (564)
....+..+|+.+|.|++|.|+.+||..++..
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 78 NDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 6778999999999999999999999998864
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=6.2e-11 Score=98.52 Aligned_cols=83 Identities=16% Similarity=0.409 Sum_probs=61.7
Q ss_pred HHHHHHHHHHhCC-CCCC-ceeHHHHHHHHH-hCC-------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCC
Q 008475 476 EEHLVAAFQYFDK-DGSG-YITVDELQQACA-EHN-------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLG 545 (564)
Q Consensus 476 ~~~l~~~F~~~D~-d~dG-~I~~~e~~~~l~-~~~-------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~ 545 (564)
...++.+|+.||. |++| .|+.+||+.+++ .+| +++.+++++|..+|.|+||.|+|+||+.++....
T Consensus 11 ~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~---- 86 (113)
T 1xk4_C 11 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT---- 86 (113)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH----
Confidence 4568899999994 9999 999999999998 665 4688999999999999999999999999997652
Q ss_pred hHHHHHHHhHHccCCCCCC
Q 008475 546 RRTMRNSLNMSMRDAPGSQ 564 (564)
Q Consensus 546 ~~~~~~~f~~~D~~~~g~~ 564 (564)
....+.|...| +++|.+
T Consensus 87 -~~~~~~f~~~~-~~~g~~ 103 (113)
T 1xk4_C 87 -WASHEKMHEGD-EGPGHH 103 (113)
T ss_dssp -HHHHC-------------
T ss_pred -HHHHHHHhhCC-CCCccc
Confidence 44567888889 999853
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.15 E-value=7.5e-11 Score=95.20 Aligned_cols=66 Identities=17% Similarity=0.273 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhC-CCCC-CceeHHHHHHHHHh-C----C--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFD-KDGS-GYITVDELQQACAE-H----N--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D-~d~d-G~I~~~e~~~~l~~-~----~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
....+..+|+.|| +||+ |+|+.+||+.+++. + | +++++++++|+.+|.|+||.|+|+||+.++...
T Consensus 8 ~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 8 AVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3467889999997 8987 99999999999985 3 4 679999999999999999999999999998754
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-10 Score=92.98 Aligned_cols=65 Identities=22% Similarity=0.327 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
....++++|+.+|+|++|+|+.+|++.+++..|++++++.+++..+|.|+||.|+|+||+.+|..
T Consensus 7 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 71 (92)
T 1fi6_A 7 QRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp HHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 35668899999999999999999999999999999999999999999999999999999998753
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-10 Score=93.62 Aligned_cols=64 Identities=19% Similarity=0.318 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
....++++|+.+|+|++|+|+.+|++.+++.+|++++++.+++..+|.|+||.|+|+||+.+|.
T Consensus 8 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 4567889999999999999999999999999999999999999999999999999999999875
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.12 E-value=2.6e-10 Score=89.68 Aligned_cols=77 Identities=23% Similarity=0.358 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC-CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHH
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN-MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSL 553 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~-~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f 553 (564)
....++.+|+.+|.|++|.|+.+||..+++.+| +++++++.+|..+|.|+||.|+|+||+.++...... .+.+.++|
T Consensus 9 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~--~~~~~~aF 86 (86)
T 2opo_A 9 DIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRGL--VKDVSKIF 86 (86)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTTT--HHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCccH--HHHHHHhC
Confidence 456789999999999999999999999999887 889999999999999999999999999999876322 24455443
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.12 E-value=3e-11 Score=104.14 Aligned_cols=100 Identities=11% Similarity=0.024 Sum_probs=64.6
Q ss_pred HhhhhhcccCCCCCCCCHHHHHHHHHhh-CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhhHHHHHHHHHH
Q 008475 407 LKEMFKAMDTDNSGAITFDELKAGLRRY-GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLEREEHLVAAFQ 484 (564)
Q Consensus 407 l~~~F~~~D~d~~G~I~~~el~~~l~~~-~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~~~~~l~~~F~ 484 (564)
.+++|..+|.|++|.|+.+||..++... .......++..+|..+|.+++|.|+.+||..++..+. .......+..+|+
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~ 84 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR 84 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 4678999999999999999999888642 2222356789999999999999999999999887776 3556778999999
Q ss_pred HhCCCCCCceeHHHHHHHHHhC
Q 008475 485 YFDKDGSGYITVDELQQACAEH 506 (564)
Q Consensus 485 ~~D~d~dG~I~~~e~~~~l~~~ 506 (564)
.+|.|++|.|+.+||..++...
T Consensus 85 ~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 85 EGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHCSSCSSSBCHHHHHHHHHHH
T ss_pred HhCCCCCCCCcHHHHHHHHHHh
Confidence 9999999999999999998654
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-10 Score=92.60 Aligned_cols=74 Identities=36% Similarity=0.563 Sum_probs=69.2
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
...++++++..++.+|..+|.|++|.|+.+||..+++.+|..++..++..+|..+|.+++|.|+|+||+.++..
T Consensus 11 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 44678889999999999999999999999999999999999999999999999999999999999999987754
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.7e-10 Score=115.48 Aligned_cols=142 Identities=22% Similarity=0.345 Sum_probs=104.0
Q ss_pred cccccccCCeEEEEEEEccCCcEEEEEEec--cccCCCHHhHHHHHHHHHHHHhhcC-CCCccEEEEEEecC---CeEEE
Q 008475 104 GRKLGQGQFGTTYLCTEIATGIEFACKSIS--KRKLISREDVEDVRREIQIMHHLAG-HKNIVTIKGAYEDS---LCVHI 177 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~E~~~l~~l~~-h~niv~~~~~~~~~---~~~~l 177 (564)
.+.|+.|.++.||++.. .+..+++|+.. .... ......+.+|..+++.|.. +..+++++.++.+. +..|+
T Consensus 43 ~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEEC--SSCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred EEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 56789999999999884 34678898765 3221 1123467889999999974 34588999988776 45899
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 008475 178 VMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS--------------------------------------- 218 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~--------------------------------------- 218 (564)
||||++|..+.+.. ...++......++.+++.+|..||+
T Consensus 119 vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99999988774321 2347788889999999999999997
Q ss_pred -------------------CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 219 -------------------LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 219 -------------------~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
..++|+|++|.|||+..+ ....+.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~-~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPT-EPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSS-SSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCC-CCcEEEEECcccccc
Confidence 358999999999999421 113468999998865
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.11 E-value=3.2e-10 Score=93.50 Aligned_cols=95 Identities=19% Similarity=0.228 Sum_probs=80.3
Q ss_pred HhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh---chhhHHHHHHHHH
Q 008475 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL---NKLEREEHLVAAF 483 (564)
Q Consensus 407 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~---~~~~~~~~l~~~F 483 (564)
+..+|..+| ++|.|+.+||..++... .....++..+|..+|.+++|.|+.+||..++..+ ........+..+|
T Consensus 11 ~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~ 86 (109)
T 1rwy_A 11 IKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLM 86 (109)
T ss_dssp HHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHH
T ss_pred HHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHH
Confidence 566677777 89999999999988532 3457889999999999999999999999888766 3345567799999
Q ss_pred HHhCCCCCCceeHHHHHHHHHh
Q 008475 484 QYFDKDGSGYITVDELQQACAE 505 (564)
Q Consensus 484 ~~~D~d~dG~I~~~e~~~~l~~ 505 (564)
+.+|.|++|.|+.+||..++..
T Consensus 87 ~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 87 AAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHCCCCCCcCCHHHHHHHHHc
Confidence 9999999999999999988753
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.10 E-value=1e-10 Score=94.55 Aligned_cols=64 Identities=14% Similarity=0.245 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
.+.++.+|+.+|+|++|+|+.+|++.+++..|++++++.++++.+|.|+||.|+|+||+.+|..
T Consensus 10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 3467899999999999999999999999999999999999999999999999999999998864
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.10 E-value=2.6e-10 Score=93.89 Aligned_cols=95 Identities=20% Similarity=0.217 Sum_probs=79.6
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh---chhhHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL---NKLEREEHLVAA 482 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~---~~~~~~~~l~~~ 482 (564)
.+..+|..+| ++|.|+.+||..++... .....++..+|..+|.+++|.|+.+||..++..+ ........+..+
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (108)
T 2pvb_A 10 DVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAF 85 (108)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 3566677777 89999999999988542 3457889999999999999999999999888766 334567778999
Q ss_pred HHHhCCCCCCceeHHHHHHHHH
Q 008475 483 FQYFDKDGSGYITVDELQQACA 504 (564)
Q Consensus 483 F~~~D~d~dG~I~~~e~~~~l~ 504 (564)
|+.+|.|++|.|+.+||..++.
T Consensus 86 ~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 86 LADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHhCCCCCCcEeHHHHHHHHh
Confidence 9999999999999999998875
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.10 E-value=2.6e-10 Score=94.05 Aligned_cols=94 Identities=20% Similarity=0.226 Sum_probs=79.4
Q ss_pred HhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh---chhhHHHHHHHHH
Q 008475 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL---NKLEREEHLVAAF 483 (564)
Q Consensus 407 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~---~~~~~~~~l~~~F 483 (564)
+..+|..+| ++|.|+.+||..++... .....++..+|..+|.+++|.|+.+||..++..+ ........+..+|
T Consensus 12 ~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~ 87 (109)
T 1bu3_A 12 VAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFL 87 (109)
T ss_dssp HHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHH
T ss_pred HHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHH
Confidence 556677777 89999999999988542 3357889999999999999999999999888776 3445677889999
Q ss_pred HHhCCCCCCceeHHHHHHHHH
Q 008475 484 QYFDKDGSGYITVDELQQACA 504 (564)
Q Consensus 484 ~~~D~d~dG~I~~~e~~~~l~ 504 (564)
+.+|.|++|.|+.+||..++.
T Consensus 88 ~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 88 KAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHHCTTCSSEECHHHHHHHHT
T ss_pred HHhCCCCCCcEeHHHHHHHHh
Confidence 999999999999999998874
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.10 E-value=3.2e-10 Score=84.27 Aligned_cols=62 Identities=24% Similarity=0.495 Sum_probs=57.7
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 478 HLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 478 ~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
.++.+|+.+|.|++|.|+.+||..++..+| ++++++..+|..+|.|++|.|+|+||+.++.+
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 367899999999999999999999999887 78999999999999999999999999998864
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.1e-10 Score=90.36 Aligned_cols=66 Identities=26% Similarity=0.430 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
.....++.+|+.+|.|++|.|+.+||..+++.+|++.++++.+|..+|.|+||.|+|+||+.++..
T Consensus 24 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 24 EELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 345678899999999999999999999999999999999999999999999999999999998864
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.9e-10 Score=91.14 Aligned_cols=68 Identities=41% Similarity=0.724 Sum_probs=62.0
Q ss_pred hhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 472 KLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 472 ~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
.....+.++.+|+.+|.|++|.|+.+||+.+++.+| +++++++++|..+|.|+||.|+|+||+.++..
T Consensus 24 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 24 DTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp CCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 345577899999999999999999999999999877 78999999999999999999999999998863
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.09 E-value=9.3e-11 Score=90.04 Aligned_cols=71 Identities=35% Similarity=0.628 Sum_probs=66.2
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
+++++...++.+|..+|.+++|.|+.+||..+++.++..++..++..+|..+|.+++|.|+|+||+.++..
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999999999999999987754
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.08 E-value=6.8e-11 Score=102.89 Aligned_cols=97 Identities=16% Similarity=0.125 Sum_probs=49.9
Q ss_pred HhhhhhcccCCCCCCCCHHHHHHHHHhhCC-----CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc----------
Q 008475 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGS-----TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN---------- 471 (564)
Q Consensus 407 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-----~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~---------- 471 (564)
-...|..+|.|++|.|+.+||..++..+.. ....+++..+|..+|.|++|.|+++||..++..+.
T Consensus 29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~ 108 (143)
T 3a4u_B 29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108 (143)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence 446899999999999999999998876422 13356788999999999999999999998765442
Q ss_pred --hhhHHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 008475 472 --KLEREEHLVAAFQYFDKDGSGYITVDELQQAC 503 (564)
Q Consensus 472 --~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l 503 (564)
.......+..+|+.+|.|+||.|+.+||..++
T Consensus 109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 11223344677899999999999999998765
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-10 Score=93.87 Aligned_cols=68 Identities=15% Similarity=0.301 Sum_probs=60.7
Q ss_pred HHHHhHhhhhhccc-CCCC-CCCCHHHHHHHHHh-h----CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 402 EEIAGLKEMFKAMD-TDNS-GAITFDELKAGLRR-Y----GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 402 ~~~~~l~~~F~~~D-~d~~-G~I~~~el~~~l~~-~----~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
..+..|.++|+.|| .|++ |+|+.+||+.+++. + +..++..+++.++..+|.|+||.|+|+||+.++..
T Consensus 7 ~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 7 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 45678999999997 8887 99999999999986 4 57788999999999999999999999999987754
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.9e-10 Score=90.41 Aligned_cols=73 Identities=18% Similarity=0.212 Sum_probs=67.7
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHH---HHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE---IRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~---~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
...++++++..++.+|..+|.+++|.|+..||..+++.+|..++..+ +..+|..+|.+++|.|+| ||+.++..
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 5 ARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp CCCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 34578888999999999999999999999999999999999999999 999999999999999999 99987754
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=99.06 E-value=7e-11 Score=127.07 Aligned_cols=121 Identities=12% Similarity=0.121 Sum_probs=53.9
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIRE 519 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~ 519 (564)
+.+++.+|..+|.|++|.|+++||..++..+......+.++.+|+.+|.|++|.|+++||..++..+. ..+++.++|..
T Consensus 10 e~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~-~~~el~~aF~~ 88 (624)
T 1djx_A 10 QHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLT-QRAEIDRAFEE 88 (624)
T ss_dssp ----------------------------------------------------------CTTHHHHHHT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhc-cHHHHHHHHHH
Confidence 44678899999999999999999999887776556677899999999999999999999999987654 45789999999
Q ss_pred hCCCCCcceeHHHHHHHHHcC-CCC-CChHHHHHHHhHHccC----CCC
Q 008475 520 VDQDNDGRIDYGEFVAMMQKG-NVG-LGRRTMRNSLNMSMRD----APG 562 (564)
Q Consensus 520 ~d~d~dg~I~~~eF~~~~~~~-~~~-~~~~~~~~~f~~~D~~----~~g 562 (564)
+|.+ +|.|+++||.+++... ++. ++.+++.++|+.+|.| ++|
T Consensus 89 fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG 136 (624)
T 1djx_A 89 AAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQR 136 (624)
T ss_dssp HHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTT
T ss_pred hcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCC
Confidence 9986 8999999999999864 555 7889999999999998 566
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.06 E-value=3.3e-10 Score=93.30 Aligned_cols=100 Identities=19% Similarity=0.258 Sum_probs=81.1
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh---chhh
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL---NKLE 474 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~---~~~~ 474 (564)
.++.++ +.++|..+| ++|.|+.+||..++... .....++..+|..+|.+++|.|+.+||..++..+ ....
T Consensus 5 ~~t~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 1rro_A 5 ILSAED---IAAALQECQ--DPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp TSCHHH---HHHHHHHTC--STTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred cCCHHH---HHHHHHHcc--CCCCcCHHHHHHHHhcC--cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCC
Confidence 344444 455666777 89999999999987532 3457889999999999999999999999887766 2334
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACA 504 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~ 504 (564)
....+..+|+.+|.|++|.|+.+||..++.
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 78 TESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 567789999999999999999999998874
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.05 E-value=2.2e-10 Score=91.34 Aligned_cols=69 Identities=23% Similarity=0.297 Sum_probs=63.1
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
+++++..+++++|+.+|.|++|+|+.+|+..+++.++ ++..++..+|..+|.+++|.|+|+||+.++..
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 71 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 4677888999999999999999999999999999886 57889999999999999999999999988753
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.05 E-value=5.3e-10 Score=92.36 Aligned_cols=96 Identities=22% Similarity=0.335 Sum_probs=79.9
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh---chhhHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL---NKLEREEHLVAA 482 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~---~~~~~~~~l~~~ 482 (564)
.+..+|..+| ++|.|+.+||..++.. ......++..+|..+|.+++|.|+.+||..++..+ ........+..+
T Consensus 11 e~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 86 (110)
T 1pva_A 11 DIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAF 86 (110)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHH
T ss_pred HHHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHH
Confidence 3556666777 8999999999998842 23467889999999999999999999999888766 333456779999
Q ss_pred HHHhCCCCCCceeHHHHHHHHHh
Q 008475 483 FQYFDKDGSGYITVDELQQACAE 505 (564)
Q Consensus 483 F~~~D~d~dG~I~~~e~~~~l~~ 505 (564)
|+.+|.|++|.|+.+||..++..
T Consensus 87 ~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 87 LKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHhCCCCCCeEcHHHHHHHHHh
Confidence 99999999999999999988753
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.3e-10 Score=86.24 Aligned_cols=65 Identities=23% Similarity=0.507 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
....++.+|+.+|.+++|.|+.+||..+++.+| ++++++..+|..+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 5 QKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 456788999999999999999999999999877 67889999999999999999999999998864
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.1e-10 Score=91.48 Aligned_cols=66 Identities=15% Similarity=0.394 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHhC-CCCC-CceeHHHHHHHHHh-CC------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFD-KDGS-GYITVDELQQACAE-HN------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D-~d~d-G~I~~~e~~~~l~~-~~------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
....+..+|+.|| .|++ |+|+.+||+.+++. +| +++++++++|+.+|.|+||.|+|+||+.+|...
T Consensus 11 ~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 11 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 3567889999997 6785 89999999999985 43 579999999999999999999999999998765
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=6.2e-10 Score=91.99 Aligned_cols=65 Identities=23% Similarity=0.292 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
..+.++.+|+.+|+|++|+|+.+||+.+++..+++++++.++|..+|.|+||.|+|+||+.++..
T Consensus 12 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~ 76 (111)
T 2kgr_A 12 SRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHL 76 (111)
T ss_dssp HHHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 45678899999999999999999999999977799999999999999999999999999998753
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.5e-10 Score=93.18 Aligned_cols=66 Identities=15% Similarity=0.407 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhC-CCCCC-ceeHHHHHHHHHh-----CC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFD-KDGSG-YITVDELQQACAE-----HN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D-~d~dG-~I~~~e~~~~l~~-----~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
..+.++.+|+.|| +|++| +|+.+||+.+++. +| ++++++++++..+|.|+||.|+|+||+.+|...
T Consensus 20 ~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 20 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 4567899999999 89997 9999999999975 44 678899999999999999999999999988754
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.05 E-value=4.5e-10 Score=89.14 Aligned_cols=66 Identities=39% Similarity=0.575 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
....+..+|+.+|.|++|.|+.+||..+++.+| ++++++..+|..+|.|++|.|+|+||+.++...
T Consensus 18 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~ 85 (90)
T 1avs_A 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (90)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 456788999999999999999999999999887 789999999999999999999999999988643
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.05 E-value=1.4e-10 Score=95.57 Aligned_cols=65 Identities=23% Similarity=0.286 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
....++++|+.+|+|++|+|+.+|++.+++.+|++++++.+++..+|.|+||.|+|+||+.+|..
T Consensus 20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~ 84 (110)
T 1iq3_A 20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHL 84 (110)
T ss_dssp SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 35668899999999999999999999999989999999999999999999999999999998863
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.3e-10 Score=86.20 Aligned_cols=65 Identities=46% Similarity=0.736 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
..+.++.+|+.+|.|++|.|+.+||..++..+| ++++++..+|..+|.|++|.|+|+||+.++.+
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 356688999999999999999999999999887 78999999999999999999999999998853
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=3.2e-10 Score=94.17 Aligned_cols=88 Identities=18% Similarity=0.253 Sum_probs=64.0
Q ss_pred HHHHHhHhhhhhcccC-CCCC-CCCHHHHHHHHH-hhCCC-----CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch
Q 008475 401 EEEIAGLKEMFKAMDT-DNSG-AITFDELKAGLR-RYGST-----LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK 472 (564)
Q Consensus 401 ~~~~~~l~~~F~~~D~-d~~G-~I~~~el~~~l~-~~~~~-----~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~ 472 (564)
++++..++++|+.+|. |++| +|+.+||..+++ .++.. ++..+++.+|..+|.+++|.|+|+||+.++....
T Consensus 8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~- 86 (113)
T 1xk4_C 8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT- 86 (113)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH-
Confidence 3456789999999995 9999 999999999999 67742 5789999999999999999999999998876432
Q ss_pred hhHHHHHHHHHHHhCCCCCCce
Q 008475 473 LEREEHLVAAFQYFDKDGSGYI 494 (564)
Q Consensus 473 ~~~~~~l~~~F~~~D~d~dG~I 494 (564)
......|...| +++|.-
T Consensus 87 ----~~~~~~f~~~~-~~~g~~ 103 (113)
T 1xk4_C 87 ----WASHEKMHEGD-EGPGHH 103 (113)
T ss_dssp ----HHHHC-------------
T ss_pred ----HHHHHHHhhCC-CCCccc
Confidence 34556788888 888753
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=99.04 E-value=4.9e-10 Score=91.43 Aligned_cols=64 Identities=20% Similarity=0.318 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
....++.+|+.+|+ +||+|+.+|++.+++..|++++++.+++..+|.|+||.|+|+||+.+|..
T Consensus 13 e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~ 76 (106)
T 1eh2_A 13 DKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 76 (106)
T ss_dssp HHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 35668899999999 99999999999999999999999999999999999999999999998763
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=5.8e-10 Score=88.85 Aligned_cols=66 Identities=15% Similarity=0.380 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHhC-CCCC-CceeHHHHHHHHHh-CC------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFD-KDGS-GYITVDELQQACAE-HN------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D-~d~d-G~I~~~e~~~~l~~-~~------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
....+..+|+.|| .||+ |+|+.+||+.+++. +| +++++++++++++|.|+||.|+|+||+.++...
T Consensus 8 ~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 8 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 3567889999998 6885 89999999999985 54 478999999999999999999999999998754
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=99.03 E-value=2.4e-10 Score=88.71 Aligned_cols=68 Identities=35% Similarity=0.619 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV 542 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~ 542 (564)
.....+. +|+.+|.|++|.|+.+||..++..+| ++++++..+|..+|.|++|.|+|+||+.++.....
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 76 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSKN 76 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC--
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhh
Confidence 3456788 99999999999999999999998877 78999999999999999999999999999987643
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.03 E-value=2.5e-10 Score=91.58 Aligned_cols=68 Identities=24% Similarity=0.312 Sum_probs=62.6
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
+++++..+++++|+.+|.|++|+|+.+|+..+++.++ ++..+++.+|..+|.+++|.|+|+||+.++.
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 4677888999999999999999999999999999876 5789999999999999999999999988764
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.03 E-value=4.6e-10 Score=92.49 Aligned_cols=71 Identities=18% Similarity=0.309 Sum_probs=63.2
Q ss_pred hhHHHHHhHhhhhhccc-CCCCC-CCCHHHHHHHHHh-----hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 399 LSEEEIAGLKEMFKAMD-TDNSG-AITFDELKAGLRR-----YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D-~d~~G-~I~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
...+++..++++|+.|| .|++| +|+.+||+.+++. ++..+++++++.++..+|.|+||.|+|+||+.++..
T Consensus 16 ~~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 16 PLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 34566788999999999 89997 9999999999986 667788999999999999999999999999988754
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.7e-10 Score=89.86 Aligned_cols=72 Identities=24% Similarity=0.413 Sum_probs=65.3
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
...+++++...++.+|+.+|.|++|.|+.+||..+++.++ ++..+++.+|..+|.+++|.|+|+||+.++..
T Consensus 18 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 18 GADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 4467888899999999999999999999999999999988 68899999999999999999999999887653
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A | Back alignment and structure |
|---|
Probab=99.02 E-value=8.8e-10 Score=93.90 Aligned_cols=64 Identities=20% Similarity=0.265 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
....++.+|+.+| |++|+|+.+|++.+|+..+++++++.+++..+|.|+||.|+|+||+.+|..
T Consensus 49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~l 112 (139)
T 2jq6_A 49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHL 112 (139)
T ss_dssp THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3567899999999 999999999999999999999999999999999999999999999998853
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=99.01 E-value=8.3e-10 Score=90.39 Aligned_cols=83 Identities=17% Similarity=0.348 Sum_probs=70.0
Q ss_pred ccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHH
Q 008475 457 TIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFV 534 (564)
Q Consensus 457 ~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~ 534 (564)
.++++++...+..... .....+..+|+.+|.|++|.|+.+||+.++..+| +++++++++|..+|.|++|.|+|+||+
T Consensus 5 ~~~~~~~~~~l~~~~~-~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~ 83 (105)
T 1wlz_A 5 ATADRDILARLHKAVT-SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 83 (105)
T ss_dssp TTCCHHHHHHHHHHHH-HTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHH
T ss_pred chhHHHHHHHHHHHHH-chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 4677788776654332 3456789999999999999999999999998877 789999999999999999999999999
Q ss_pred HHHHcC
Q 008475 535 AMMQKG 540 (564)
Q Consensus 535 ~~~~~~ 540 (564)
.++...
T Consensus 84 ~~~~~~ 89 (105)
T 1wlz_A 84 SRFSSE 89 (105)
T ss_dssp HHHC--
T ss_pred HHHhcc
Confidence 998754
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.01 E-value=1e-09 Score=88.62 Aligned_cols=66 Identities=21% Similarity=0.473 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhC-CCCCC-ceeHHHHHHHHHh-----CC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFD-KDGSG-YITVDELQQACAE-----HN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D-~d~dG-~I~~~e~~~~l~~-----~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
....++.+|+.|| .|++| +|+.+||+.+++. +| ++++++++++..+|.|+||.|+|+||+.++...
T Consensus 8 ~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 8 AMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 3567889999997 89998 9999999999975 44 689999999999999999999999999998754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 564 | ||||
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 9e-94 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-85 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-85 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-84 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 7e-84 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 3e-82 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 5e-82 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 6e-81 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 9e-80 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 7e-79 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-78 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 7e-77 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 9e-77 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 8e-73 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 4e-71 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-70 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 8e-69 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-68 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 6e-68 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 6e-68 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 7e-68 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-65 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 7e-65 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 1e-63 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 5e-62 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-61 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 5e-61 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-60 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-60 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-59 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-58 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 5e-58 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-57 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-57 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 4e-57 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 5e-57 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-56 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-56 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 6e-56 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 6e-56 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 8e-56 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-54 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-54 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-54 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 7e-54 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 8e-54 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 9e-54 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-53 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-53 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-53 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-52 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-50 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-50 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 3e-50 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 4e-50 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-49 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-46 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-46 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-44 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-44 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 5e-44 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-41 | |
| d1s6ia_ | 182 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 7e-35 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 2e-32 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 6e-32 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 9e-32 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 2e-07 | |
| d1dtla_ | 156 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 8e-30 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 1e-29 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 4e-09 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 1e-05 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 2e-29 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 7e-28 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 7e-09 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 2e-26 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 7e-07 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 0.004 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 5e-25 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 7e-12 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 0.002 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 0.003 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 6e-25 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 4e-12 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 4e-24 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 3e-11 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 6e-24 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 1e-11 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 9e-24 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 2e-15 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 4e-11 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 3e-23 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 5e-16 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 4e-23 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 6e-23 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 8e-10 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 2e-04 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 0.002 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 1e-22 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 1e-04 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 6e-04 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 2e-22 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 3e-22 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 5e-08 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 5e-22 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 2e-04 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 7e-22 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 9e-22 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 3e-13 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 5e-21 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 2e-11 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 6e-21 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 9e-09 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 0.001 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 7e-21 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 5e-08 | |
| d1wdcb_ | 142 | a.39.1.5 (B:) Myosin Essential Chain {Bay scallop | 3e-20 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 4e-20 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 4e-20 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 2e-13 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 2e-06 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 7e-20 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 8e-15 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 9e-20 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 1e-14 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 0.001 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 1e-19 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 3e-06 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 7e-19 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 8e-14 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 0.002 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 1e-18 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 1e-11 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 3e-18 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 2e-09 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 7e-18 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 3e-13 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 1e-17 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 2e-17 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 4e-17 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 3e-13 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 5e-06 | |
| d1auib_ | 165 | a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch | 4e-17 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 6e-17 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 9e-15 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 8e-17 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 9e-17 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 2e-13 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 2e-16 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 4e-16 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 9e-13 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 1e-04 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 5e-16 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 8e-16 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 8e-16 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 3e-13 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 7e-07 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 2e-15 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 3e-14 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 3e-15 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 4e-14 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 3e-15 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 7e-07 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 4e-15 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 6e-14 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 1e-08 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 4e-15 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 5e-15 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 0.004 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 9e-15 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 6e-10 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 2e-14 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 3e-12 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 3e-14 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 1e-10 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 7e-14 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-07 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 1e-13 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 1e-08 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-13 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 4e-05 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-13 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 5e-09 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 2e-12 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 9e-04 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 3e-12 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 2e-10 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 3e-12 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 1e-06 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 4e-12 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 1e-08 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 6e-12 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 2e-11 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 1e-04 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 6e-12 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 2e-10 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 4e-11 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 1e-09 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 5e-11 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-05 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 1e-10 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 5e-09 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 2e-10 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 3e-10 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 2e-10 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 1e-06 | |
| d1iq3a_ | 110 | a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9 | 4e-09 | |
| d1iq3a_ | 110 | a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9 | 9e-08 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 9e-09 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-07 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 1e-06 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 1e-04 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 5e-05 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 0.003 | |
| d1qlsa_ | 95 | a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), | 6e-05 | |
| d1j55a_ | 94 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-04 | |
| d2pula1 | 392 | d.144.1.6 (A:5-396) Methylthioribose kinase MtnK { | 6e-04 | |
| d1xk4c1 | 83 | a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sa | 0.001 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 287 bits (735), Expect = 9e-94
Identities = 118/298 (39%), Positives = 173/298 (58%), Gaps = 5/298 (1%)
Query: 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI 152
+ ++IRD+Y LG G F L + T A K I+K+ L +E + EI +
Sbjct: 3 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENEIAV 60
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGV 212
+H + H NIV + YE ++++M+L +GGELFDRI+++G Y+ER A+ L ++
Sbjct: 61 LHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 119
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPE 272
V+ H LG++HRDLKPEN L + D+D + DFGLS PG + + G+P YVAPE
Sbjct: 120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 179
Query: 273 VLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331
VL K Y D W+ GVI YILL G PPF+ E +F+ +LK +F+S W ISDS
Sbjct: 180 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 239
Query: 332 AKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKK 389
AKD IR ++ P +R T + L HPWI A D+++ +V ++K+ A +K K+
Sbjct: 240 AKDFIRHLMEKDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNFAKSKWKQ 296
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 267 bits (684), Expect = 2e-85
Identities = 94/334 (28%), Positives = 153/334 (45%), Gaps = 28/334 (8%)
Query: 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI 152
K ++ D Y + +LG G FG + C E ATG F K I+ + + V + EI I
Sbjct: 23 KQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV---KNEISI 79
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVG 211
M+ L H ++ + A+ED + +++E +GGELFDRI + SE + R
Sbjct: 80 MNQLH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACE 138
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAP 271
++ H ++H D+KPEN + S+K IDFGL+ P +I + + AP
Sbjct: 139 GLKHMHEHSIVHLDIKPENIMC-ETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAP 197
Query: 272 EVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330
E++ + G D+W GV+ Y+LLSG+ PF E V + +F+ D + +S
Sbjct: 198 EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP 257
Query: 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICEN---------------------GVAPDRS 369
AKD I+ +L +P +RLT H+ L HPW+ + D
Sbjct: 258 EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWP 317
Query: 370 LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEE 403
+ R+ FS++ K + ++ +E
Sbjct: 318 APQPAIGRIANFSSLRKHRPQEYQIYDSYFDRKE 351
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 266 bits (680), Expect = 2e-85
Identities = 81/304 (26%), Positives = 148/304 (48%), Gaps = 12/304 (3%)
Query: 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL 156
+ + Y + LG+G+FG + C E ++ + K + + D V++EI I++
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA 58
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEA 215
H+NI+ + ++E + ++ E +G ++F+RI +ER+ + ++
Sbjct: 59 -RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL 275
HS + H D++PEN + ++K I+FG + KPG F + +P Y APEV
Sbjct: 118 LHSHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 276 -KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334
D+W+ G ++Y+LLSG+ PF AET Q I + ++ F+ + + IS A D
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 335 LIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRV 394
+ ++L + R+TA E L HPW+ + + V+ LK + L K L +
Sbjct: 237 FVDRLLVKERKSRMTASEALQHPWLKQKI----ERVSTKVIRTLKHRRYYHTLIKKDLNM 292
Query: 395 IAES 398
+ +
Sbjct: 293 VVSA 296
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 264 bits (675), Expect = 3e-84
Identities = 104/303 (34%), Positives = 147/303 (48%), Gaps = 9/303 (2%)
Query: 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI 152
K D++ D Y + +LG G FG + TE ATG FA K + D E VR+EIQ
Sbjct: 20 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQT 76
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRII-QRGHYSERKAAELTRIIVG 211
M L H +V + A+ED + ++ E +GGELF+++ + SE +A E R +
Sbjct: 77 MSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK 135
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAP 271
+ H +H DLKPEN + K + LK IDFGL+ P Q G+ + AP
Sbjct: 136 GLCHMHENNYVHLDLKPENIMFTTKRSN-ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 194
Query: 272 EVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330
EV K G D+W+ GV+ YILLSG+ PF E V + + + IS+
Sbjct: 195 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 254
Query: 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKM 390
KD IRK+L + P+ R+T H+ L HPW+ S P+ SR + K K
Sbjct: 255 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPS--SRYTKIRDSIKTKYD 312
Query: 391 ALR 393
A
Sbjct: 313 AWP 315
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 260 bits (666), Expect = 7e-84
Identities = 99/272 (36%), Positives = 145/272 (53%), Gaps = 16/272 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS------REDVEDVRREIQIMH 154
Y LG+G C T E+A K I S +E E +E+ I+
Sbjct: 5 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
++GH NI+ +K YE + +V +L GELFD + ++ SE++ ++ R ++ V+
Sbjct: 65 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 124
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL 274
A H L ++HRDLKPEN LL DDD ++K DFG S PG+ +V G+P Y+APE++
Sbjct: 125 ALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 181
Query: 275 L-------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327
YG E D+W+ GVI+Y LL+G PPFW Q + ++ G+ F S W
Sbjct: 182 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 241
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
SD+ KDL+ + L QP +R TA E L HP+
Sbjct: 242 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 273
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 255 bits (653), Expect = 3e-82
Identities = 85/263 (32%), Positives = 136/263 (51%), Gaps = 10/263 (3%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ +GR LG+G+FG YL E + A K + K +L +RRE++I HL H
Sbjct: 8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHP 66
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NI+ + G + D+ V++++E G ++ + + + E++ A + + CHS
Sbjct: 67 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 126
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYG 279
V+HRD+KPEN LL LK DFG SV + T + G+ Y+ PE++ + +
Sbjct: 127 VIHRDIKPENLLL---GSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGRMHD 182
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339
+ D+W+ GV+ Y L G PPF A T Q + + + F +++ A+DLI ++
Sbjct: 183 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF----PDFVTEGARDLISRL 238
Query: 340 LCSQPSERLTAHEVLCHPWICEN 362
L PS+R EVL HPWI N
Sbjct: 239 LKHNPSQRPMLREVLEHPWITAN 261
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 256 bits (656), Expect = 5e-82
Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 22/314 (7%)
Query: 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
D+ L++ R++G G FG Y ++ A K +S S E +D+ +E++ +
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
L H N + +G Y +VME C G + + E + A +T + +
Sbjct: 71 KLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL 274
HS ++HRD+K N LL + +K DFG + P VG+PY++APEV+
Sbjct: 130 YLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPA---NSFVGTPYWMAPEVI 183
Query: 275 L----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330
L Y + DVW+ G+ L PP + + + + + S+
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGHWSE 241
Query: 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQ--FSAMNKLK 388
++ + L P +R T+ +L H ++ R P V+ L Q A+ +L
Sbjct: 242 YFRNFVDSCLQKIPQDRPTSEVLLKHRFV-------LRERPPTVIMDLIQRTKDAVRELD 294
Query: 389 KMALRVIAESLSEE 402
+ R + + L +E
Sbjct: 295 NLQYRKMKKILFQE 308
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 253 bits (647), Expect = 6e-81
Identities = 105/272 (38%), Positives = 160/272 (58%), Gaps = 6/272 (2%)
Query: 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED---VEDVRRE 149
+ +N+ D Y G +LG GQF C E +TG+++A K I KR+ S ED+ RE
Sbjct: 4 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 63
Query: 150 IQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII 209
+ I+ + H N++T+ YE+ V +++EL AGGELFD + ++ +E +A E + I
Sbjct: 64 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 210 VGVVEACHSLGVMHRDLKPENFLLVNKDD-DFSLKAIDFGLSVFFKPGQIFTDVVGSPYY 268
+ V HSL + H DLKPEN +L++++ +K IDFGL+ G F ++ G+P +
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182
Query: 269 VAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327
VAPE++ + G EAD+W+ GVI YILLSG PF +T+Q V + +FE + +
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
S AKD IR++L P +R+T + L HPWI
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 250 bits (639), Expect = 9e-80
Identities = 77/287 (26%), Positives = 128/287 (44%), Gaps = 16/287 (5%)
Query: 92 HKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQ 151
+ N D + + +LG G FG Y T + A K I + S E++ED EI
Sbjct: 5 TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEID 61
Query: 152 IMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIV 210
I+ H NIV + A+ + I++E CAGG + +++ +E + + + +
Sbjct: 62 ILASCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 120
Query: 211 GVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDVVGSPYYV 269
+ H ++HRDLK N L D +K DFG+S + Q +G+PY++
Sbjct: 121 DALNYLHDNKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWM 177
Query: 270 APEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD 323
APEV++ + Y +ADVW+ G+ L + PP + + K +
Sbjct: 178 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 237
Query: 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSL 370
P S + KD ++K L R T ++L HP++ + P R L
Sbjct: 238 P-SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 283
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 249 bits (637), Expect = 7e-79
Identities = 102/324 (31%), Positives = 159/324 (49%), Gaps = 20/324 (6%)
Query: 93 KTDNIRDLYT-LGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQ 151
K + I D Y + LG G G T +FA K + RRE++
Sbjct: 5 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--------KARREVE 56
Query: 152 IMHHLAGHKNIVTIKGAYEDSL----CVHIVMELCAGGELFDRIIQRGH--YSERKAAEL 205
+ + +IV I YE+ C+ IVME GGELF RI RG ++ER+A+E+
Sbjct: 57 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 116
Query: 206 TRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGS 265
+ I ++ HS+ + HRD+KPEN L +K + LK DFG + T +
Sbjct: 117 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 176
Query: 266 PYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWA----ETQQGIFDAVLKGHIDF 320
PYYVAPEVL + Y D+W+ GVI+YILL G PPF++ G+ + G +F
Sbjct: 177 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 236
Query: 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQ 380
+ W +S+ K LIR +L ++P++R+T E + HPWI ++ P L + + + +
Sbjct: 237 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDK 296
Query: 381 FSAMNKLKKMALRVIAESLSEEEI 404
+ ++M + + E+I
Sbjct: 297 ERWEDVKEEMTSALATMRVDYEQI 320
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 247 bits (631), Expect = 2e-78
Identities = 84/265 (31%), Positives = 128/265 (48%), Gaps = 12/265 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ G+ LG+G F T L E+AT E+A K + KR +I V V RE +M L H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 68
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
V + ++D ++ + GEL I + G + E T IV +E H G
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLL-K 276
++HRDLKPEN LL ++D ++ DFG + P VG+ YV+PE+L K
Sbjct: 129 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 185
Query: 277 HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336
+D+W G I+Y L++G+PPF A + IF ++K DF A+DL+
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 241
Query: 337 RKMLCSQPSERLTAHEVLCHPWICE 361
K+L ++RL E+ + +
Sbjct: 242 EKLLVLDATKRLGCEEMEGYGPLKA 266
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 242 bits (620), Expect = 7e-77
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 14/288 (4%)
Query: 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
+ + YT K+GQG GT Y ++ATG E A + ++ ++ + E + EI +M
Sbjct: 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMR 72
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
+ NIV +Y + +VME AGG L D ++ E + A + R + +E
Sbjct: 73 EN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALE 130
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEV 273
HS V+HRD+K +N LL D S+K DFG + +VG+PY++APEV
Sbjct: 131 FLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 274 LL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332
+ K YGP+ D+W+ G++ ++ G PP+ E + E +S
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIF 246
Query: 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQ 380
+D + + L +R +A E+L H ++ P SL P +++ K+
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQHQFL--KIAKPLSSLTP-LIAAAKE 291
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 241 bits (617), Expect = 9e-77
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 12/267 (4%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ L + LG+G +G L T A K + ++ + + E++++EI I L H+
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKML-NHE 63
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
N+V G + ++ +E C+GGELFDRI E A ++ V H +G
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG---QIFTDVVGSPYYVAPEVLL-- 275
+ HRD+KPEN LL D+ +LK DFGL+ F+ ++ + G+ YVAPE+L
Sbjct: 124 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 276 KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335
+ + DVW+ G++L +L+G P+ + + K + +PW I + L
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 239
Query: 336 IRKMLCSQPSERLTAHEVLCHPWICEN 362
+ K+L PS R+T ++ W +
Sbjct: 240 LHKILVENPSARITIPDIKKDRWYNKP 266
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 231 bits (590), Expect = 8e-73
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 14/266 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
++G+G F T Y + T +E A + RKL ++ + + + E +++ L H
Sbjct: 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HP 68
Query: 161 NIVTIKGAYEDSL----CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
NIV ++E ++ C+ +V EL G L + + + R I+ ++
Sbjct: 69 NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFL 128
Query: 217 HSLG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL 274
H+ ++HRDLK +N + S+K D GL+ K V+G+P ++APE+
Sbjct: 129 HTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATL-KRASFAKAVIGTPEFMAPEMY 185
Query: 275 LKHYGPEADVWTAGVILYILLSGVPPFW-AETQQGIFDAVLKGHIDFESDPWPLISDSAK 333
+ Y DV+ G+ + + + P+ + I+ V G D K
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKV--AIPEVK 243
Query: 334 DLIRKMLCSQPSERLTAHEVLCHPWI 359
++I + ER + ++L H +
Sbjct: 244 EIIEGCIRQNKDERYSIKDLLNHAFF 269
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 228 bits (583), Expect = 4e-71
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 10/262 (3%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ L + LG+G FG +L T FA K++ K ++ +DVE E +++ H
Sbjct: 4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
+ + ++ + VME GG+L I + +A I+ ++ HS G
Sbjct: 64 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 123
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-QIFTDVVGSPYYVAPEVLL-KHY 278
+++RDLK +N L D D +K DFG+ G G+P Y+APE+LL + Y
Sbjct: 124 IVYRDLKLDNIL---LDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKY 180
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338
D W+ GV+LY +L G PF + ++ +F ++ + + + AKDL+ K
Sbjct: 181 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW----LEKEAKDLLVK 236
Query: 339 MLCSQPSERLTAH-EVLCHPWI 359
+ +P +RL ++ HP
Sbjct: 237 LFVREPEKRLGVRGDIRQHPLF 258
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 224 bits (573), Expect = 3e-70
Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 21/272 (7%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y + +G G +G + G K + ++ + + + E+ ++ L H
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELK-HP 63
Query: 161 NIVTIKGAYEDSL--CVHIVMELCAGGELFDRII----QRGHYSERKAAELTRIIVGVVE 214
NIV D ++IVME C GG+L I +R + E + + ++
Sbjct: 64 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123
Query: 215 ACHSLG-----VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF-TDVVGSPYY 268
CH V+HRDLKP N L D ++K DFGL+ F VG+PYY
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 180
Query: 269 VAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327
++PE + Y ++D+W+ G +LY L + +PPF A +Q+ + + +G
Sbjct: 181 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYR 237
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
SD ++I +ML + R + E+L +P I
Sbjct: 238 YSDELNEIITRMLNLKDYHRPSVEEILENPLI 269
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 223 bits (568), Expect = 8e-69
Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 16/265 (6%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + R LG G FG +L G +A K + K ++ + VE E ++ + H
Sbjct: 6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THP 64
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
I+ + G ++D+ + ++M+ GGELF + + + A + +E HS
Sbjct: 65 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 124
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYG 279
+++RDLKPEN LL D + +K DFG + + + + G+P Y+APEV+ K Y
Sbjct: 125 IIYRDLKPENILL---DKNGHIKITDFGFAKYVP--DVTYTLCGTPDYIAPEVVSTKPYN 179
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKM 339
D W+ G+++Y +L+G PF+ ++ +L + F P ++ KDL+ ++
Sbjct: 180 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF----PPFFNEDVKDLLSRL 235
Query: 340 LCSQPSERL-----TAHEVLCHPWI 359
+ S+RL +V HPW
Sbjct: 236 ITRDLSQRLGNLQNGTEDVKNHPWF 260
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 221 bits (564), Expect = 3e-68
Identities = 66/309 (21%), Positives = 115/309 (37%), Gaps = 53/309 (17%)
Query: 93 KTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQI 152
K D+ + +LG G G + + +G+ A K I I + RE+Q+
Sbjct: 4 KDDD----FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQV 57
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGV 212
+H IV GA+ + I ME GG L + + G E+ +++ ++
Sbjct: 58 LHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 213 VEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAP 271
+ +MHRD+KP N L+ + +K DFG+S VG+ Y++P
Sbjct: 117 LTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSP 172
Query: 272 EVLL-KHYGPEADVWTAGVILYILLSGVPPFWAET---QQGIFDAVLKGHIDFESD---- 323
E L HY ++D+W+ G+ L + G P + +F ++G
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT 232
Query: 324 ---------------------------------PWPLISDSAKDLIRKMLCSQPSERLTA 350
P + S +D + K L P+ER
Sbjct: 233 PGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL 292
Query: 351 HEVLCHPWI 359
+++ H +I
Sbjct: 293 KQLMVHAFI 301
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 222 bits (566), Expect = 6e-68
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 14/268 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA--G 158
+++ R +G+G FG Y C + TG +A K + K+++ ++ E ++ ++
Sbjct: 6 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 65
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
IV + A+ + +++L GG+L + Q G +SE I+ +E H+
Sbjct: 66 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 125
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL--K 276
V++RDLKP N LL D+ ++ D GL+ F + VG+ Y+APEVL
Sbjct: 126 RFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKP-HASVGTHGYMAPEVLQKGV 181
Query: 277 HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336
Y AD ++ G +L+ LL G PF + + + + + S + L+
Sbjct: 182 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPELRSLL 240
Query: 337 RKMLCSQPSERLT-----AHEVLCHPWI 359
+L + RL A EV P+
Sbjct: 241 EGLLQRDVNRRLGCLGRGAQEVKESPFF 268
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 219 bits (558), Expect = 6e-68
Identities = 58/270 (21%), Positives = 102/270 (37%), Gaps = 7/270 (2%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
++ D Y LG LG G +L ++ + A K + RRE Q
Sbjct: 4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 63
Query: 156 LAGHKNIVTIKGAYED----SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
L H IV + E +IVME G L D + G + ++A E+
Sbjct: 64 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 122
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG-LSVFFKPGQIFTDVVGSPYYVA 270
+ H G++HRD+KP N ++ + + ++ V+G+ Y++
Sbjct: 123 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 182
Query: 271 PEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329
PE +DV++ G +LY +L+G PPF ++ + ++ S +S
Sbjct: 183 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 242
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
++ K L P R + +
Sbjct: 243 ADLDAVVLKALAKNPENRYQTAAEMRADLV 272
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 218 bits (557), Expect = 7e-68
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 20/270 (7%)
Query: 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED---VRREIQIM 153
+ Y +G LG G FG+ Y ++ + A K + K ++ ++ + V E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 154 HHL-AGHKNIVTIKGAYEDSLCVHIVMELCAGG-ELFDRIIQRGHYSERKAAELTRIIVG 211
+ +G ++ + +E +++E +LFD I +RG E A ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAP 271
V CH+ GV+HRD+K EN L+ + LK IDFG K ++TD G+ Y P
Sbjct: 122 AVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPP 178
Query: 272 EVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329
E + +++G A VW+ G++LY ++ G PF + + +++G + F +S
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR----VS 228
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ LIR L +PS+R T E+ HPW+
Sbjct: 229 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 214 bits (546), Expect = 2e-65
Identities = 83/266 (31%), Positives = 131/266 (49%), Gaps = 15/266 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ + LG+G FG L E ATG +A K + K +I++++V E +++ + H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHP 65
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
+ +K A++ + VME GGELF + + ++E +A IV +E HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDVVGSPYYVAPEVLL-KHY 278
V++RD+K EN +L D D +K DFGL G G+P Y+APEVL Y
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 279 GPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRK 338
G D W GV++Y ++ G PF+ + + +F+ +L I F +S AK L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF----PRTLSPEAKSLLAG 238
Query: 339 MLCSQPSERL-----TAHEVLCHPWI 359
+L P +RL A EV+ H +
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 210 bits (537), Expect = 7e-65
Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 19/269 (7%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
T+G+++G G FGT Y + A K ++ + + ++ + E+ ++
Sbjct: 7 DGQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTR 62
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRI-IQRGHYSERKAAELTRIIVGVVEAC 216
H NI+ G Y + + IV + C G L+ + I + K ++ R ++
Sbjct: 63 -HVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG---QIFTDVVGSPYYVAPEV 273
H+ ++HRDLK N L +D ++K DFGL+ F + GS ++APEV
Sbjct: 121 HAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 274 LL----KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE--SDPWPL 327
+ Y ++DV+ G++LY L++G P+ + ++ S
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCH 356
+ K L+ + L + ER ++L
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 210 bits (535), Expect = 1e-63
Identities = 79/357 (22%), Positives = 134/357 (37%), Gaps = 55/357 (15%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
++ YT +G+G +G + + A K IS + + + REI+I+
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 62
Query: 156 LAGHKNIVTIKGAYEDSLCVH----IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
H+NI+ I ++ G +L+ +++ H S I+
Sbjct: 63 FR-HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYK-LLKTQHLSNDHICYFLYQILR 120
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ----IFTDVVGSPY 267
++ HS V+HRDLKP N LL + LK DFGL+ P T+ V + +
Sbjct: 121 GLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 177
Query: 268 YVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW 325
Y APE++L Y D+W+ G IL +LS P F + + +L +
Sbjct: 178 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 237
Query: 326 ---------------------------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPW 358
P A DL+ KML P +R+ + L HP+
Sbjct: 238 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 297
Query: 359 ICENGVAPDRSLDPAVLSRLKQFSAMNK--LKKMALRVIAESLSEEEIAGLKEMFKA 413
+ + D + A + + K LK++ EE A + +++
Sbjct: 298 LEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIF---------EETARFQPGYRS 345
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 204 bits (520), Expect = 5e-62
Identities = 70/284 (24%), Positives = 108/284 (38%), Gaps = 33/284 (11%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED--VEDVRREIQIMHHLAGHKNI 162
LG+GQF T Y + T A K I +D REI+++ L H NI
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNI 62
Query: 163 VTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVM 222
+ + A+ + +V + + + + +E H ++
Sbjct: 63 IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 122
Query: 223 HRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDVVGSPYYVAPEVLL--KHYG 279
HRDLKP N LL D++ LK DFGL+ F P + +T V + +Y APE+L + YG
Sbjct: 123 HRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYG 179
Query: 280 PEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP------------- 326
D+W G IL LL VP ++ + + + WP
Sbjct: 180 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239
Query: 327 -----------LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
D DLI+ + P R+TA + L +
Sbjct: 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 283
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 202 bits (515), Expect = 4e-61
Identities = 74/301 (24%), Positives = 131/301 (43%), Gaps = 49/301 (16%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
+D Y L RKLG+G++ + I + K + + ++REI+I+ +
Sbjct: 32 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP------VKKKKIKREIKILEN 85
Query: 156 LAGHKNIVTIKGAYED--SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVV 213
L G NI+T+ +D S +V E + ++ I+ +
Sbjct: 86 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKAL 142
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEV 273
+ CHS+G+MHRD+KP N ++ + + L+ ID+GL+ F+ PGQ + V S Y+ PE+
Sbjct: 143 DYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 200
Query: 274 LL--KHYGPEADVWTAGVILYILLSGVPPFWAET--------------QQGIFDAVLKGH 317
L+ + Y D+W+ G +L ++ PF+ + ++D + K +
Sbjct: 201 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 260
Query: 318 ID--------------------FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHP 357
I+ S+ L+S A D + K+L RLTA E + HP
Sbjct: 261 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 320
Query: 358 W 358
+
Sbjct: 321 Y 321
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 203 bits (517), Expect = 5e-61
Identities = 83/310 (26%), Positives = 153/310 (49%), Gaps = 24/310 (7%)
Query: 56 SKENPKKDNSAPRISPSKKDNIMRRGIDNQTYYVLGHKTDNIRDLYTLGRKLGQGQFGTT 115
+K+ ++++ ++ +K+D + + +Q L D + + LG G FG
Sbjct: 6 AKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQL--------DQFDRIKTLGTGSFGRV 57
Query: 116 YLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175
L +G +A K + K+K++ + +E E +I+ + +V ++ +++D+ +
Sbjct: 58 MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNL 116
Query: 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVN 235
++VME AGGE+F + + G +SE A IV E HSL +++RDLKPEN L+
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 236 KDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYIL 294
D ++ DFG + K + G+P +APE++L K Y D W GV++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK--GRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 295 LSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERL-----T 349
+G PPF+A+ I++ ++ G + F S KDL+R +L ++R
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRF----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 350 AHEVLCHPWI 359
+++ H W
Sbjct: 288 VNDIKNHKWF 297
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 201 bits (512), Expect = 1e-60
Identities = 78/273 (28%), Positives = 136/273 (49%), Gaps = 17/273 (6%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIA---TGIEFACKSISKRKLISRED-VEDVRREIQIMHHL 156
+ L + LG G +G +L +I+ TG +A K + K ++ + E R E Q++ H+
Sbjct: 26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 85
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
+VT+ A++ +H++++ GGELF + QR ++E + IV +E
Sbjct: 86 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHL 145
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP--GQIFTDVVGSPYYVAPEVL 274
H LG+++RD+K EN LL D + + DFGLS F + D G+ Y+AP+++
Sbjct: 146 HKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 202
Query: 275 L---KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331
+ D W+ GV++Y LL+G PF + ++ + + + E +S
Sbjct: 203 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL 262
Query: 332 AKDLIRKMLCSQPSERL-----TAHEVLCHPWI 359
AKDLI+++L P +RL A E+ H +
Sbjct: 263 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 200 bits (508), Expect = 4e-60
Identities = 67/310 (21%), Positives = 119/310 (38%), Gaps = 48/310 (15%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y K+GQG FG + TG + A K + REI+I+ L H+
Sbjct: 12 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK-HE 69
Query: 161 NIVTIKGAYEDSL--------CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGV 212
N+V + +++V + C ++ + + ++++
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-----IFTDVVGSPY 267
+ H ++HRD+K N L+ D LK DFGL+ F + +T+ V + +
Sbjct: 130 LYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLW 186
Query: 268 YVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW 325
Y PE+LL + YGP D+W AG I+ + + P T+Q + + + W
Sbjct: 187 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 246
Query: 326 PLI----------------------------SDSAKDLIRKMLCSQPSERLTAHEVLCHP 357
P + A DLI K+L P++R+ + + L H
Sbjct: 247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 306
Query: 358 WICENGVAPD 367
+ + + D
Sbjct: 307 FFWSDPMPSD 316
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 199 bits (507), Expect = 1e-59
Identities = 67/309 (21%), Positives = 125/309 (40%), Gaps = 44/309 (14%)
Query: 86 TYYVLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVED 145
+ +R +Y + +G G +G + TG + A K + R S +
Sbjct: 5 YRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQSELFAKR 63
Query: 146 VRREIQIMHHLAGHKNIVTIKGAY------EDSLCVHIVMELCAGGELFDRIIQRGHYSE 199
RE++++ H+ H+N++ + + +D ++VM G ++++ E
Sbjct: 64 AYRELRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGE 120
Query: 200 RKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF 259
+ L ++ + H+ G++HRDLKP N + ++D LK +DFGL+
Sbjct: 121 DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQ--ADSEM 175
Query: 260 TDVVGSPYYVAPEVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH 317
T V + +Y APEV+L Y D+W+ G I+ +++G F ++K
Sbjct: 176 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT 235
Query: 318 IDFESDPWPLI---------------------------SDSAKDLIRKMLCSQPSERLTA 350
++ + S A +L+ KML +R+TA
Sbjct: 236 GTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTA 295
Query: 351 HEVLCHPWI 359
E L HP+
Sbjct: 296 GEALAHPYF 304
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 194 bits (494), Expect = 3e-58
Identities = 64/293 (21%), Positives = 111/293 (37%), Gaps = 35/293 (11%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAG-- 158
Y ++G+G +G + ++ G F + + RE+ ++ HL
Sbjct: 9 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 68
Query: 159 HKNIVTIKGAYEDS-----LCVHIVMELCAGGEL-FDRIIQRGHYSERKAAELTRIIVGV 212
H N+V + S + +V E + + ++ ++
Sbjct: 69 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 128
Query: 213 VEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPE 272
++ HS V+HRDLKP+N L+ +K DFGL+ + T VV + +Y APE
Sbjct: 129 LDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 185
Query: 273 VLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL---- 327
VLL Y D+W+ G I + P F + +L + WP
Sbjct: 186 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 245
Query: 328 -------------------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361
I + KDL+ K L P++R++A+ L HP+ +
Sbjct: 246 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 193 bits (491), Expect = 5e-58
Identities = 68/290 (23%), Positives = 112/290 (38%), Gaps = 34/290 (11%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y K+G+G +GT + T A K + REI ++ L HK
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELK-HK 61
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV + + +V E C G ++ + CHS
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDVVGSPYYVAPEVLL--KH 277
V+HRDLKP+N L+ + + LK +FGL+ F P + ++ V + +Y P+VL K
Sbjct: 122 VLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 278 YGPEADVWTAGVILYILLSG-VPPFWAETQQGIFDAVLKGHIDFESDPW----------- 325
Y D+W+AG I L + P F + + + W
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 326 --------------PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361
P ++ + +DL++ +L P +R++A E L HP+ +
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 192 bits (487), Expect = 2e-57
Identities = 74/287 (25%), Positives = 115/287 (40%), Gaps = 34/287 (11%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y K+G+G +G Y G FA K I K REI I+ L H
Sbjct: 4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HS 60
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
NIV + + +V E + G A ++ + CH
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 221 VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDVVGSPYYVAPEVLL--KH 277
V+HRDLKP+N L+ + + LK DFGL+ F P + +T + + +Y AP+VL+ K
Sbjct: 121 VLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 278 YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI--------- 328
Y D+W+ G I +++G P F ++ + + S WP +
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 329 ----------------SDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+S DL+ KML P++R+TA + L H +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 193 bits (491), Expect = 3e-57
Identities = 72/306 (23%), Positives = 113/306 (36%), Gaps = 47/306 (15%)
Query: 91 GHKTDNIRDL-YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRRE 149
G D +++ YT + +G G FG Y +G A K + + D RE
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRE 63
Query: 150 IQIMHHLAGHKNIVTIKGAY------EDSLCVHIVMELCAGG---ELFDRIIQRGHYSER 200
+QIM L H NIV ++ + +D + +++V++ +
Sbjct: 64 LQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 201 KAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFT 260
+ + HS G+ HRD+KP+N LL D LK DFG + G+
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 261 DVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKG-- 316
+ S YY APE++ Y DVW+AG +L LL G P F ++ ++K
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 317 -----------------------HIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEV 353
+ P A L ++L P+ RLT E
Sbjct: 241 TPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
Query: 354 LCHPWI 359
H +
Sbjct: 301 CAHSFF 306
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (483), Expect = 4e-57
Identities = 59/267 (22%), Positives = 95/267 (35%), Gaps = 17/267 (6%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIAT---GIEFACKSISKRKLISREDVEDVRREIQIMH 154
L KLG G FG A + A K + L E ++D RE+ MH
Sbjct: 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVV 213
L H+N++ + G + +V EL G L DR+ + GH+ + + +
Sbjct: 67 SL-DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 124
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ----IFTDVVGSPYYV 269
S +HRDL N LL +K DFGL + +
Sbjct: 125 GYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 270 APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327
APE L + + +D W GV L+ + + G P+ I + K
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED-- 239
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEVL 354
+++ + +P +R T +
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTFVALR 266
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 191 bits (485), Expect = 5e-57
Identities = 59/291 (20%), Positives = 102/291 (35%), Gaps = 22/291 (7%)
Query: 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHL 156
+ + Y LGRK+G G FG YL T+IA G E A K + + E +I +
Sbjct: 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMM 59
Query: 157 AGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEAC 216
G I TI+ + +VMEL +S + L ++ +E
Sbjct: 60 QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 119
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF--------TDVVGSPYY 268
HS +HRD+KP+NFL+ + IDFGL+ ++ + ++ G+ Y
Sbjct: 120 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 179
Query: 269 VAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP--- 324
+ L D+ + G +L G P+ + S P
Sbjct: 180 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 239
Query: 325 -WPLISDSAKDLIRKMLCSQPSERLTA---HEVLCHPWICENGVAPDRSLD 371
+ + ++ ++ + + G + D D
Sbjct: 240 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH-RQGFSYDYVFD 289
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (481), Expect = 3e-56
Identities = 57/274 (20%), Positives = 109/274 (39%), Gaps = 24/274 (8%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+G+G FG G+ ++ S++D D E++++ L H
Sbjct: 12 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR----------------GHYSERKAAE 204
NI+ + GA E +++ +E G L D + + S ++
Sbjct: 72 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131
Query: 205 LTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVG 264
+ ++ +HRDL N L+ +++ K DFGLS + T
Sbjct: 132 FAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVKKTMGRL 188
Query: 265 SPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFES 322
++A E L Y +DVW+ GV+L+ ++S G P+ T +++ + +G +
Sbjct: 189 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRL 245
Query: 323 DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356
+ D DL+R+ +P ER + ++L
Sbjct: 246 EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (481), Expect = 4e-56
Identities = 54/292 (18%), Positives = 108/292 (36%), Gaps = 40/292 (13%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT-----EIATGIEFACKSISKRKLISREDVEDVRREIQI 152
R+ G+ LG G FG T + I+ A K + ++ + E + E+++
Sbjct: 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKM 93
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH---------------- 196
M L H+NIV + GA S ++++ E C G+L + + +
Sbjct: 94 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 153
Query: 197 -------YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249
+ + +E +HRDL N L+ +K DFGL
Sbjct: 154 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV---THGKVVKICDFGL 210
Query: 250 SVFFKPGQ---IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAE 304
+ + + ++APE L Y ++DVW+ G++L+ + S GV P+
Sbjct: 211 ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 270
Query: 305 TQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356
F +++ + + ++ +++ +R + +
Sbjct: 271 PVDANFYKLIQNGFKMDQPFY--ATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (475), Expect = 6e-56
Identities = 59/264 (22%), Positives = 103/264 (39%), Gaps = 21/264 (7%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
L + +G+G+FG L G + A K I + E +M L
Sbjct: 6 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLR 58
Query: 158 GHKNIVTIKGA-YEDSLCVHIVMELCAGGELFDRIIQRGH--YSERKAAELTRIIVGVVE 214
H N+V + G E+ ++IV E A G L D + RG + + + +E
Sbjct: 59 -HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 117
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL 274
+HRDL N L+ +D K DFGL+ Q + APE L
Sbjct: 118 YLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEAL 172
Query: 275 L-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332
K + ++DVW+ G++L+ + S G P+ + + V KG ++ D +
Sbjct: 173 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG---YKMDAPDGCPPAV 229
Query: 333 KDLIRKMLCSQPSERLTAHEVLCH 356
++++ + R + ++
Sbjct: 230 YEVMKNCWHLDAAMRPSFLQLREQ 253
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (481), Expect = 6e-56
Identities = 69/336 (20%), Positives = 134/336 (39%), Gaps = 41/336 (12%)
Query: 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHH 155
+ + Y +G G +G+ + TG+ A K +S+ S + RE++++ H
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 73
Query: 156 LAGHKNIVTIKGAYEDSLCV----HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVG 211
+ H+N++ + + + + + + G + I++ ++ L I+
Sbjct: 74 MK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 212 VVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAP 271
++ HS ++HRDLKP N ++D LK +DFGL+ T V + +Y AP
Sbjct: 133 GLKYIHSADIIHRDLKPSNLA---VNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 187
Query: 272 EVLL--KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE-------- 321
E++L HY D+W+ G I+ LL+G F +L+
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 322 -------------------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362
++ + + A DL+ KML +R+TA + L H + +
Sbjct: 248 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 363 GVAPDRSL-DPAVLSRLKQFSAMNKLKKMALRVIAE 397
D + DP S + +++ K + +
Sbjct: 308 HDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVIS 343
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (476), Expect = 8e-56
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 34/288 (11%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
+ K+G+G +G Y TG A K I + REI ++ L H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL-NHP 61
Query: 161 NIVTIKGAYEDSLCVHIVMELCA-GGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSL 219
NIV + +++V E + F ++ + CHS
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF-KPGQIFTDVVGSPYYVAPEVLL--K 276
V+HRDLKP+N L+ + + ++K DFGL+ F P + +T V + +Y APE+LL K
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 277 HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPL--------- 327
+Y D+W+ G I +++ F +++ + + + WP
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 328 ----------------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359
+ + + L+ +ML P++R++A L HP+
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 184 bits (467), Expect = 1e-54
Identities = 61/273 (22%), Positives = 98/273 (35%), Gaps = 21/273 (7%)
Query: 98 RDLYTLG-RKLGQGQFGTTYLCT--EIATGIEFACKSISKRKLISREDVEDVRREIQIMH 154
R L TL ++LG G FGT A K + K + +++ E +M
Sbjct: 5 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQ 63
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVE 214
L + IV + G E +VME+ G L + Q H ++ EL + ++
Sbjct: 64 QL-DNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 121
Query: 215 ACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF----TDVVGSPYYVA 270
+HRDL N LL K DFGLS + + + T + A
Sbjct: 122 YLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 178
Query: 271 PEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328
PE + + ++DVW+ GV+++ S G P+ + + KG
Sbjct: 179 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGC 235
Query: 329 SDSAKDLIRKMLCSQPSERLTAHEV---LCHPW 358
DL+ R V L + +
Sbjct: 236 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (463), Expect = 3e-54
Identities = 58/261 (22%), Positives = 107/261 (40%), Gaps = 17/261 (6%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
T ++LG GQFG + A K I + + E E ++M +L+ H+
Sbjct: 6 LTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLS-HE 59
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRI-IQRGHYSERKAAELTRIIVGVVEACHSL 219
+V + G + I+ E A G L + + R + ++ E+ + + +E S
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 220 GVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI--FTDVVGSPYYVAPEVLL-K 276
+HRDL N L+ +D +K DFGLS + + + PEVL+
Sbjct: 120 QFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 277 HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDL 335
+ ++D+W GV+++ + S G P+ T + + +G L S+ +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG---LRLYRPHLASEKVYTI 233
Query: 336 IRKMLCSQPSERLTAHEVLCH 356
+ + ER T +L +
Sbjct: 234 MYSCWHEKADERPTFKILLSN 254
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (464), Expect = 5e-54
Identities = 61/270 (22%), Positives = 109/270 (40%), Gaps = 21/270 (7%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L KLGQG FG ++ T T A K++ E +E Q+M L
Sbjct: 16 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKP----GTMSPEAFLQEAQVMKKL- 69
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEA 215
H+ +V + + ++IV E + G L D + + + ++ I +
Sbjct: 70 RHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 128
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ--IFTDVVGSPYYVAPEV 273
+ +HRDL+ N L+ ++ K DFGL+ + + + APE
Sbjct: 129 VERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 185
Query: 274 LL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331
L + ++DVW+ G++L L + G P+ + + D V +G + P +S
Sbjct: 186 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 242
Query: 332 AKDLIRKMLCSQPSERLTAHEVL--CHPWI 359
DL+ + +P ER T + +
Sbjct: 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYF 272
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 181 bits (461), Expect = 7e-54
Identities = 63/267 (23%), Positives = 104/267 (38%), Gaps = 18/267 (6%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIAT---GIEFACKSISKRKLISREDVEDVRREIQIMH 154
R+ LGR +G+GQFG + ++ + A K+ + S E +E M
Sbjct: 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--KNCTSDSVREKFLQEALTMR 63
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVV 213
H +IV + G ++ V I+MELC GEL + R + +
Sbjct: 64 QF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 121
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF--TDVVGSPYYVAP 271
S +HRD+ N L+ + +K DFGLS + + + + ++AP
Sbjct: 122 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 178
Query: 272 EVLL-KHYGPEADVWTAGVILY-ILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329
E + + + +DVW GV ++ IL+ GV PF + + G P
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCP 235
Query: 330 DSAKDLIRKMLCSQPSERLTAHEVLCH 356
+ L+ K PS R E+
Sbjct: 236 PTLYSLMTKCWAYDPSRRPRFTELKAQ 262
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 184 bits (467), Expect = 8e-54
Identities = 75/335 (22%), Positives = 133/335 (39%), Gaps = 54/335 (16%)
Query: 84 NQTYYV-LGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRED 142
NQ Y V +G T + Y + +G G G + A K +S+ ++
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTH 59
Query: 143 VEDVRREIQIMHHLAGHKNIVTIKGAY------EDSLCVHIVMELCAGGELFDRIIQRGH 196
+ RE+ +M + HKNI+++ + E+ V++VMEL +
Sbjct: 60 AKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QME 115
Query: 197 YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256
+ + L ++ ++ HS G++HRDLKP N ++ D +LK +DFGL+
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTS 172
Query: 257 QIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLK 315
+ T V + YY APEV+L Y D+W+ G I+ ++ F ++ V++
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232
Query: 316 G--------------------------------------HIDFESDPWPLISDSAKDLIR 337
+S+ L + A+DL+
Sbjct: 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 292
Query: 338 KMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDP 372
KML P++R++ + L HP+I + P
Sbjct: 293 KMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 327
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 182 bits (463), Expect = 9e-54
Identities = 57/288 (19%), Positives = 108/288 (37%), Gaps = 22/288 (7%)
Query: 82 IDNQTYYVLGHKTDNI-----RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISK-R 135
ID T+ + + +G G+FG G +I +
Sbjct: 4 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK 63
Query: 136 KLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR- 194
+ + D E IM H N++ ++G S V I+ E G L + Q
Sbjct: 64 SGYTEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND 122
Query: 195 GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254
G ++ + + R I ++ + +HRDL N L+ + + K DFGLS F +
Sbjct: 123 GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLE 179
Query: 255 PGQIFTDV------VGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQ 306
+ APE + + + +DVW+ G++++ ++S G P+W T
Sbjct: 180 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 239
Query: 307 QGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL 354
Q + +A+ + D+ P + L+ + R +++
Sbjct: 240 QDVINAIEQ---DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV 284
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 181 bits (459), Expect = 1e-53
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 18/272 (6%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
T +++G GQFG +L + + A K+I + ED E ++M L
Sbjct: 4 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIRE----GAMSEEDFIEEAEVMMKL- 57
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEAC 216
H +V + G + + +V E G L D + + ++ + + +
Sbjct: 58 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 117
Query: 217 HSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ--IFTDVVGSPYYVAPEVL 274
V+HRDL N L+ ++ +K DFG++ F Q T + +PEV
Sbjct: 118 EEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 174
Query: 275 L-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332
Y ++DVW+ GV+++ + S G P+ + + + + G F L S
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHV 231
Query: 333 KDLIRKMLCSQPSERLTAHEVLCH-PWICENG 363
++ +P +R +L I E+G
Sbjct: 232 YQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 263
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 181 bits (461), Expect = 1e-53
Identities = 62/275 (22%), Positives = 105/275 (38%), Gaps = 23/275 (8%)
Query: 98 RDLYTLG-RKLGQGQFGTTYLCTEIAT--GIEFACKSISKRKLISREDVEDVRREIQIMH 154
RD + +LG G FG+ I+ A K + + + D E++ RE QIMH
Sbjct: 7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMH 64
Query: 155 HLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRII-QRGHYSERKAAELTRIIVGVV 213
L + IV + G + + +VME+ GG L ++ +R AEL + +
Sbjct: 65 QL-DNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 122
Query: 214 EACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF----TDVVGSPYYV 269
+ +HRDL N LL + K DFGLS + + +
Sbjct: 123 KYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 179
Query: 270 APEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPL 327
APE + + + +DVW+ GV ++ LS G P+ + + +G + P
Sbjct: 180 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK---RMECPPE 236
Query: 328 ISDSAKDLIRKMLCSQPSERLTAHEV---LCHPWI 359
L+ + +R V + +
Sbjct: 237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 181 bits (459), Expect = 2e-53
Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 17/263 (6%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R T+ KLG GQ+G Y + A K++ + +VE+ +E +M +
Sbjct: 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIK 71
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHY--SERKAAELTRIIVGVVEA 215
H N+V + G +I+ E G L D + + S + I +E
Sbjct: 72 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 130
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI--FTDVVGSPYYVAPEV 273
+HRDL N L+ ++ +K DFGLS + APE
Sbjct: 131 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 187
Query: 274 LL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331
L + ++DVW GV+L+ + + G+ P+ +++ + K D+ + +
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEK 244
Query: 332 AKDLIRKMLCSQPSERLTAHEVL 354
+L+R PS+R + E+
Sbjct: 245 VYELMRACWQWNPSDRPSFAEIH 267
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 177 bits (450), Expect = 3e-52
Identities = 53/263 (20%), Positives = 100/263 (38%), Gaps = 19/263 (7%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA 157
R+ L +LG GQFG ++ + A KS+ + + E +M L
Sbjct: 12 RETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQ----GSMSPDAFLAEANLMKQLQ 66
Query: 158 GHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEA 215
H+ +V + ++I+ E G L D + + K ++ I +
Sbjct: 67 -HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 216 CHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF--TDVVGSPYYVAPEV 273
+HRDL+ N L+ D S K DFGL+ + + + APE
Sbjct: 125 IEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181
Query: 274 LL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331
+ + ++DVW+ G++L +++ G P+ T + + +G + +
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPEE 238
Query: 332 AKDLIRKMLCSQPSERLTAHEVL 354
L+R +P +R T +
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLR 261
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 173 bits (439), Expect = 2e-50
Identities = 46/262 (17%), Positives = 97/262 (37%), Gaps = 20/262 (7%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
Y +GR++G+G FG + T + + A K +R D +R E + LAG
Sbjct: 7 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCT 61
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
I + ++ L +V++L + +S + A + ++ V++ H
Sbjct: 62 GIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS 121
Query: 221 VMHRDLKPENFLLVNKDDDFS--LKAIDFGLSVFFKPG--------QIFTDVVGSPYYVA 270
+++RD+KP+NFL+ + + + +DFG+ F++ + ++ G+ Y++
Sbjct: 122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS 181
Query: 271 PEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDP----W 325
L + D+ G + L G P+ + +S P
Sbjct: 182 INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELC 241
Query: 326 PLISDSAKDLIRKMLCSQPSER 347
+ +
Sbjct: 242 AGFPEEFYKYMHYARNLAFDAT 263
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (440), Expect = 2e-50
Identities = 58/285 (20%), Positives = 104/285 (36%), Gaps = 35/285 (12%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT-----EIATGIEFACKSISKRKLISREDVEDVRREIQI 152
R+ + G+ LG G FG T + + A K + + E + E+++
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKV 79
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH---------------- 196
+ +L H NIV + GA ++ E C G+L + + ++
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 197 --YSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254
+ + + S +HRDL N LL K DFGL+ K
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIK 196
Query: 255 PGQ---IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGI 309
+ + ++APE + Y E+DVW+ G+ L+ L S G P+
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256
Query: 310 FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL 354
F ++K S D+++ + P +R T +++
Sbjct: 257 FYKMIKEGFRMLSPEH--APAEMYDIMKTCWDADPLKRPTFKQIV 299
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (438), Expect = 3e-50
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 36/285 (12%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCTEIAT-------GIEFACKSISKRKLISREDVEDVRREI 150
RD LG+ LG+G FG L I + A K + + +D+ D+ E+
Sbjct: 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEM 69
Query: 151 QIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRG--------------- 195
++M + HKNI+ + GA +++++E + G L + + R
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 129
Query: 196 -HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254
S + + +E S +HRDL N L+ +D +K DFGL+
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 186
Query: 255 PGQIFT---DVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGI 309
+ + ++APE L + Y ++DVW+ GV+L+ + + G P+ + +
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246
Query: 310 FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL 354
F + +GH D ++ ++R + PS+R T +++
Sbjct: 247 FKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 288
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (439), Expect = 4e-50
Identities = 50/263 (19%), Positives = 94/263 (35%), Gaps = 14/263 (5%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISK--RKLISREDVEDVRREIQIMHHLAG 158
+ + LG G FGT Y I G + K R+ S + +++ E +M +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-D 69
Query: 159 HKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS 218
+ ++ + G S I + G L + + + I +
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLL 275
++HRDL N L+ +K DFGL+ + ++A E +L
Sbjct: 130 RRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 276 -KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333
+ Y ++DVW+ GV ++ L++ G P+ I + KG P+ +
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE---RLPQPPICTIDVY 243
Query: 334 DLIRKMLCSQPSERLTAHEVLCH 356
++ K R E++
Sbjct: 244 MIMVKCWMIDADSRPKFRELIIE 266
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 170 bits (431), Expect = 3e-49
Identities = 55/291 (18%), Positives = 104/291 (35%), Gaps = 43/291 (14%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT-----EIATGIEFACKSISKRKLISREDVEDVRREIQI 152
R+ R +G+G FG + A K + + S + D +RE +
Sbjct: 12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAAL 69
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHY--------------- 197
M + NIV + G + ++ E A G+L + + +
Sbjct: 70 MAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 128
Query: 198 ---------SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248
S + + R + + +HRDL N L+ ++ +K DFG
Sbjct: 129 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFG 185
Query: 249 LSVFFKPGQIF---TDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLS-GVPPFWA 303
LS + + ++ PE + + Y E+DVW GV+L+ + S G+ P++
Sbjct: 186 LSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 245
Query: 304 ETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL 354
+ + V G+I +L+R P++R + +
Sbjct: 246 MAHEEVIYYVRDGNI---LACPENCPLELYNLMRLCWSKLPADRPSFCSIH 293
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (412), Expect = 1e-46
Identities = 53/273 (19%), Positives = 108/273 (39%), Gaps = 21/273 (7%)
Query: 94 TDNI-RDLYTLGRKLGQGQFGTTYLCTEIATG----IEFACKSISKRKLISREDVEDVRR 148
T I T + +G G+FG Y + + A K++ + + D
Sbjct: 1 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLG 58
Query: 149 EIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQR-GHYSERKAAELTR 207
E IM H NI+ ++G + I+ E G L + ++ G +S + + R
Sbjct: 59 EAGIMGQF-SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR 117
Query: 208 IIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ----IFTDVV 263
I ++ ++ +HRDL N L+ + + K DFGLS + +
Sbjct: 118 GIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 174
Query: 264 GSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFE 321
+ APE + + + +DVW+ G++++ +++ G P+W + + A+ G F
Sbjct: 175 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---FR 231
Query: 322 SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL 354
+ L+ + + + R +++
Sbjct: 232 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIV 264
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (412), Expect = 2e-46
Identities = 57/290 (19%), Positives = 111/290 (38%), Gaps = 35/290 (12%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT-----EIATGIEFACKSISKRKLISREDVEDVRREIQI 152
R+ T+ R+LGQG FG Y + A K++++ S + + E +
Sbjct: 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASV 76
Query: 153 MHHLAGHKNIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGH----------YSERKA 202
M ++V + G ++MEL G+L + S K
Sbjct: 77 MKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 135
Query: 203 AELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---IF 259
++ I + ++ +HRDL N ++ +DF++K DFG++
Sbjct: 136 IQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKG 192
Query: 260 TDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGV-PPFWAETQQGIFDAVLKGH 317
+ +++PE L + +DVW+ GV+L+ + + P+ + + + V++G
Sbjct: 193 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 252
Query: 318 IDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVL------CHPWICE 361
+ D D +L+R P R + E++ P E
Sbjct: 253 LL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (399), Expect = 1e-44
Identities = 61/286 (21%), Positives = 111/286 (38%), Gaps = 34/286 (11%)
Query: 98 RDLYTLGRKLGQGQFGTTYLCT-----EIATGIEFACKSISKRKLISREDVEDVRREIQI 152
RD LG+ LG+G FG + AT A K + + + + + E++I
Sbjct: 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKI 69
Query: 153 MHHLAGHKNIVTIKGA-YEDSLCVHIVMELCAGGELFDRIIQRGHY-------------- 197
+ H+ H N+V + GA + + +++E C G L + + +
Sbjct: 70 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 129
Query: 198 --SERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255
+ + + +E S +HRDL N LL + +K DFGL+
Sbjct: 130 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYK 186
Query: 256 GQIF---TDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGV-PPFWAETQQGIF 310
+ D ++APE + + Y ++DVW+ GV+L+ + S P+ F
Sbjct: 187 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 246
Query: 311 DAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356
LK + + + + +PS+R T E++ H
Sbjct: 247 CRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 290
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (398), Expect = 2e-44
Identities = 57/266 (21%), Positives = 106/266 (39%), Gaps = 21/266 (7%)
Query: 103 LGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGH 159
+G+G FG Y T + I A KS+++ +V E IM + H
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFS-H 87
Query: 160 KNIVTIKGA-YEDSLCVHIVMELCAGGELFDRIIQRGH-YSERKAAELTRIIVGVVEACH 217
N++++ G +V+ G+L + I H + + + ++
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 147
Query: 218 SLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI-----FTDVVGSPYYVAPE 272
S +HRDL N +L D+ F++K DFGL+ + T ++A E
Sbjct: 148 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 204
Query: 273 VLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330
L + + ++DVW+ GV+L+ L++ G PP+ I +L+G D
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR---RLLQPEYCPD 261
Query: 331 SAKDLIRKMLCSQPSERLTAHEVLCH 356
+++ K + R + E++
Sbjct: 262 PLYEVMLKCWHPKAEMRPSFSELVSR 287
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (395), Expect = 5e-44
Identities = 57/295 (19%), Positives = 98/295 (33%), Gaps = 51/295 (17%)
Query: 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK 160
L +G+G+FG + G E A K S R+ E EI L H+
Sbjct: 5 IVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVML-RHE 57
Query: 161 NIVTIKGAYEDS----LCVHIVMELCAGGELFDRIIQRGHYSERK-------AAELTRII 209
NI+ A + +V + G LFD + + E A+ L +
Sbjct: 58 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 117
Query: 210 VGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTD-----VVG 264
+ +V + HRDLK +N L+ + + D GL+V D VG
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 265 SPYYVAPEVLL-------KHYGPEADVWTAGVILYILLSGVPPFWAE------------- 304
+ Y+APEVL AD++ G++ + +
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234
Query: 305 --TQQGIFDAVLKGHIDFESDPWPL---ISDSAKDLIRKMLCSQPSERLTAHEVL 354
+ + + V + + ++R+ + + RLTA +
Sbjct: 235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 150 bits (380), Expect = 3e-41
Identities = 72/357 (20%), Positives = 128/357 (35%), Gaps = 79/357 (22%)
Query: 87 YY--VLGHKTDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVE 144
Y+ G + R Y L RKLG G F T +L ++ A K + K+ + E
Sbjct: 1 YHPAFKGEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----E 54
Query: 145 DVRREIQIMHHL----------AGHKNIVTIKGAYED--SLCVHIVMELCAGGELFDRII 192
EI+++ + G +I+ + + VH+VM GE +I
Sbjct: 55 AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI 114
Query: 193 QRGHYSERKAAELTRIIVGVVEACHSL----GVMHRDLKPENFLLVNKD---DDFSLKAI 245
++ + + +I ++ + G++H D+KPEN L+ D + +K
Sbjct: 115 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIA 174
Query: 246 DFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAE 304
D G + ++ + + Y +PEVLL +G AD+W+ +++ L++G F +
Sbjct: 175 DLGNACWYDEHYTNSI--QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 232
Query: 305 TQQG-------------------------------IFDAVLKGHIDFESDPWPL------ 327
F++ + WPL
Sbjct: 233 EGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE 292
Query: 328 -------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI-----CENGVAPDRSLDP 372
+ D + ML P +R A ++ HPW+ E PDR L
Sbjct: 293 KYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYG 349
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 127 bits (319), Expect = 7e-35
Identities = 118/163 (72%), Positives = 142/163 (87%), Gaps = 2/163 (1%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNS 455
AE LSEEEI GLKE+FK +DTDNSG ITFDELK GL+R GS L ++EI+DLMDAAD+D S
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 456 GTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLED 515
GTIDYGEFIAATVHLNKLEREE+LV+AF YFDKDGSGYIT+DE+QQAC + + D+ ++D
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD 120
Query: 516 IIREVDQDNDGRIDYGEFVAMMQK--GNVGLGRRTMRNSLNMS 556
+I+E+DQDNDG+IDYGEF AMM+K GN G+GRRTMR +LN+
Sbjct: 121 MIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLR 163
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 119 bits (298), Expect = 2e-32
Identities = 53/147 (36%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNS 455
+ +L+EE+IA KE F D DN+G+I+ EL +R G + + E+ DLM+ DVD +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 456 GTIDYGEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVL 512
I++ EF+A + L + E+ L+ AF+ FDK+G G I+ EL+ +TD
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 513 LEDIIREVDQDNDGRIDYGEFVAMMQK 539
++D++REV D G I+ +F A++ K
Sbjct: 121 VDDMLREVS-DGSGEINIQQFAALLSK 146
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 118 bits (297), Expect = 6e-32
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 382 SAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT 441
++M + A LSEE IA K F D D G I+ EL +R G
Sbjct: 1 ASMTDQQAEARAF----LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE 56
Query: 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLN----KLEREEHLVAAFQYFDKDGSGYITVD 497
E+ +++ D D SGTID+ EF+ V K + EE L F+ FDK+ G+I ++
Sbjct: 57 ELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIE 116
Query: 498 ELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
EL + ++T+ +ED++++ D++NDGRID+ EF+ MM+
Sbjct: 117 ELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 117 bits (294), Expect = 9e-32
Identities = 57/144 (39%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
Query: 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSG 456
E L+EE+IA KE F D D G IT EL +R G + E++D+++ D D +G
Sbjct: 1 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 457 TIDYGEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQ--ACAEHNMTDVLL 513
TID+ EF++ + + + EE L+ AF+ FD+DG+G I+ EL+ +TD +
Sbjct: 61 TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEV 120
Query: 514 EDIIREVDQDNDGRIDYGEFVAMM 537
+++IRE D D DG I+Y EFV MM
Sbjct: 121 DEMIREADIDGDGHINYEEFVRMM 144
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 48.4 bits (114), Expect = 2e-07
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 469 HLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLLEDIIREVDQDNDG 526
L + + E AF FDKDG G IT EL N T+ L+D+I EVD D +G
Sbjct: 2 QLTEEQIAE-FKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 527 RIDYGEFVAMMQ 538
ID+ EF+++M
Sbjct: 61 TIDFPEFLSLMA 72
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 112 bits (281), Expect = 8e-30
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 393 RVIAESLSEEEIAGLKEMFKAMDTD-NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAAD 451
+ E L+EE+ K F G+I+ EL +R G E+++++D D
Sbjct: 2 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 61
Query: 452 VDNSGTIDYGEFIAATVHLNK----LEREEHLVAAFQYFDKDGSGYITVDELQQACAEH- 506
D SGT+D+ EF+ V K + EE L F+ FDK+ GYI ++EL+
Sbjct: 62 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 121
Query: 507 -NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
+T+ +E+++++ D++NDGRIDY EF+ M+
Sbjct: 122 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 112 bits (282), Expect = 1e-29
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 386 KLKKMALRVIAES--LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEI 443
KL+ ++ + ES +E EI + F SG ++ +E K + ++
Sbjct: 3 KLRPEVMQDLLESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASKF 60
Query: 444 RD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQA 502
+ + D + GTID+ EFI A ++ + E+ L AF +D DG+GYI+ E+ +
Sbjct: 61 AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEI 120
Query: 503 C--------------AEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ + + E I R++D + DG++ EF+ +
Sbjct: 121 VQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 171
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 54.1 bits (129), Expect = 4e-09
Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 14/130 (10%)
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD 448
K + A + +F+ D + G I F E L + +++
Sbjct: 45 KKIYGNFFPYGDASKFA--EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFS 102
Query: 449 AADVDNSGTIDYGEFIAA------------TVHLNKLEREEHLVAAFQYFDKDGSGYITV 496
D+D +G I E + + ++ E+ F+ D + G +++
Sbjct: 103 MYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSL 162
Query: 497 DELQQACAEH 506
+E +
Sbjct: 163 EEFIRGAKSD 172
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.7 bits (102), Expect = 1e-05
Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 462 EFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMT---DVLLEDIIR 518
E + + E + SG+++++E ++ E + R
Sbjct: 7 EVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFR 66
Query: 519 EVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPG 562
D + DG ID+ EF+ + + G + ++ + +M D G
Sbjct: 67 TFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNG 110
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 2e-29
Identities = 44/140 (31%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Query: 401 EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDY 460
EE+ ++E F D D +G I ELK +R G K EI+ ++ D + +G +++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 461 GEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDII 517
G+F+ T +++ + +E ++ AF+ FD D +G I+ L++ E N+TD L+++I
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMI 121
Query: 518 REVDQDNDGRIDYGEFVAMM 537
E D+D DG + EF+ +M
Sbjct: 122 DEADRDGDGEVSEQEFLRIM 141
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (269), Expect = 7e-28
Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 19/171 (11%)
Query: 386 KLKKMALRVIAES--LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEI 443
KLK + + +E+E+ + F SG + + +++ T+
Sbjct: 4 KLKPEVVEELTRKTYFTEKEVQQWYKGFI--KDCPSGQLDAAGFQKIYKQFFPFGDPTKF 61
Query: 444 RD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQA 502
+ + D + G I++ EFI A ++ +E L AF+ +D D GYIT +E+
Sbjct: 62 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDI 121
Query: 503 C--------------AEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
E N + ++ I +D++ DG++ EF +
Sbjct: 122 VDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 172
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (127), Expect = 7e-09
Identities = 24/130 (18%), Positives = 41/130 (31%), Gaps = 14/130 (10%)
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD 448
+ + + A +F D + G I F E L D ++R
Sbjct: 46 QKIYKQFFPFGDPTKFA--TFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFK 103
Query: 449 AADVDNSGTIDYGEFIAA------------TVHLNKLEREEHLVAAFQYFDKDGSGYITV 496
D+DN G I E + + + E+ + F DK+ G +T+
Sbjct: 104 LYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTL 163
Query: 497 DELQQACAEH 506
E Q+
Sbjct: 164 QEFQEGSKAD 173
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 104 bits (259), Expect = 2e-26
Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 20/163 (12%)
Query: 397 ESLSEEEIAGLKEMFKAMDTD-NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNS 455
++ + A L+E +K + SG + E K + + + + A D +
Sbjct: 13 GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGD 72
Query: 456 GTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNM------- 508
TID+ E++AA + + E L F+ +DKD +G I EL
Sbjct: 73 NTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSV 132
Query: 509 ------------TDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ +++ I VD++ DG++ EFV ++
Sbjct: 133 EVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 175
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.5 bits (112), Expect = 7e-07
Identities = 17/97 (17%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 470 LNKLEREEHLVAAFQYFDKDG-SGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDG 526
+ + + L ++ F ++ SG + + E ++ + +E + R D + D
Sbjct: 15 VGAADAAQ-LQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDN 73
Query: 527 RIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563
ID+ E+VA + G ++ + + +D G
Sbjct: 74 TIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGC 110
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 36.4 bits (83), Expect = 0.004
Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 355 CHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAM 414
+ + DR ++ + + ++ A + EE + +F +
Sbjct: 100 FKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVV---DRIFLLV 156
Query: 415 DTDNSGAITFDELKAGLRRYGSTLK 439
D + G ++ +E G RR +K
Sbjct: 157 DENGDGQLSLNEFVEGARRDKWVMK 181
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 100 bits (249), Expect = 5e-25
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 386 KLKKMALRVIAES--LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEI 443
KL K L + +S EI + F + SG + ++ +++ +
Sbjct: 7 KLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPEDF 64
Query: 444 RD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQA 502
+ L D DN+G I + EFI ++ EE L AF+ +D + GYIT DE+
Sbjct: 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124
Query: 503 CA--------------EHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
A + ++ ++ I + +D++ DG I EF +
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 62.1 bits (150), Expect = 7e-12
Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 14/127 (11%)
Query: 392 LRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAAD 451
+ S E+ A +F D DN+G I F+E L + ++ + D
Sbjct: 52 YKQFFPFGSPEDFA--NHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYD 109
Query: 452 VDNSGTIDYGEFIAATVHLNKL------------EREEHLVAAFQYFDKDGSGYITVDEL 499
+++ G I + E + + K+ E + F+ DK+ GYIT+DE
Sbjct: 110 LNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
Query: 500 QQACAEH 506
++
Sbjct: 170 REGSKVD 176
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.5 bits (86), Expect = 0.002
Identities = 14/105 (13%), Positives = 40/105 (38%), Gaps = 8/105 (7%)
Query: 462 EFIAATVHLNKLEREEHLVAAFQYFDKDG-SGYITVDELQQACAE---HNMTDVLLEDII 517
+ + + ++ E + + F +D SG + ++ + + + +
Sbjct: 14 TCLKQSTYFDRRE----IQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLF 69
Query: 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPG 562
D+DN+G I + EF+ ++ + G + + + + G
Sbjct: 70 TVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDG 114
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 36.7 bits (84), Expect = 0.003
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 384 MNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEI 443
+ M E+ E + K++FK MD + G IT DE + G + S + +
Sbjct: 129 YKMMGSMVTLNEDEATPEMRV---KKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNL 185
Query: 444 RD 445
D
Sbjct: 186 YD 187
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 97.3 bits (242), Expect = 6e-25
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVD 497
LK +I+ +DA V G+ ++ +F A K + F+ D D SG+I +
Sbjct: 6 LKADDIKKALDA--VKAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEE 61
Query: 498 ELQQACAE-----HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
EL+ ++TD + ++ D+D DG+I EF ++ +
Sbjct: 62 ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 108
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 60.7 bits (147), Expect = 4e-12
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 379 KQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR---YG 435
K+F A+ LK M S + +K++FKA+D D SG I +ELK L+ G
Sbjct: 27 KKFFALVGLKAM---------SAND---VKKVFKAIDADASGFIEEEELKFVLKSFAADG 74
Query: 436 STLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
L D E + + AAD D G I EF
Sbjct: 75 RDLTDAETKAFLKAADKDGDGKIGIDEFET 104
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 94.6 bits (235), Expect = 4e-24
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 436 STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYIT 495
+ LKD ++ + A + + EF A +K + + AF D+D SG+I
Sbjct: 3 AGLKDADVAAALAACSAA--DSFKHKEFFAKVGLASK--SLDDVKKAFYVIDQDKSGFIE 58
Query: 496 VDELQQACAE-----HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
DEL+ +TD + + + D+D DG I EF AM++
Sbjct: 59 EDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 58.0 bits (140), Expect = 3e-11
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 394 VIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR---YGSTLKDTEIRDLMDAA 450
L+ + + +K+ F +D D SG I DELK L+ L D E + +
Sbjct: 29 FAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADG 88
Query: 451 DVDNSGTIDYGEFIA 465
D D G I EF A
Sbjct: 89 DKDGDGMIGVDEFAA 103
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 94.3 bits (234), Expect = 6e-24
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVD 497
LK +I + A + GT DY F K + + + F+ DKD SG+I +
Sbjct: 6 LKADDINKAISA--FKDPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEE 61
Query: 498 ELQQACAE-----HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
EL+ ++ D + ++ D D+DG+I EF M+ +
Sbjct: 62 ELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 59.6 bits (144), Expect = 1e-11
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 379 KQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY---G 435
K+F + LK ++ + +KE+F+ +D D SG I +ELK L+ + G
Sbjct: 27 KRFFHLVGLKGK---------TDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHG 74
Query: 436 STLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
L DTE + L+ A D D+ G I EF
Sbjct: 75 RDLNDTETKALLAAGDSDHDGKIGADEFAK 104
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 96.7 bits (240), Expect = 9e-24
Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)
Query: 397 ESLSEEEIA-GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT--------EIRDLM 447
+ LSEEEI K +F + D+ I+ EL+ L R S KD R ++
Sbjct: 11 KVLSEEEIDDNFKTLFSKLAGDD-MEISVKELQTILNRIISKHKDLRTNGFSLESCRSMV 69
Query: 448 DAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE-H 506
+ D D +G + EF + F+ FD D SG ++ E++ A
Sbjct: 70 NLMDRDGNGKLGLVEFNILWNRIRNYLTI------FRKFDLDKSGSMSAYEMRMAIEAAG 123
Query: 507 NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
L +I D++ ID+ FV + +
Sbjct: 124 FKLPCQLHQVIVARFADDELIIDFDNFVRCLVR 156
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 72.4 bits (177), Expect = 2e-15
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 408 KEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 467
+F+ D D SG+++ E++ + G L ++ ++ A D+ ID+ F+
Sbjct: 96 LTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCL 154
Query: 468 VHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
V L E L F+ D + +G I +D +
Sbjct: 155 VRL------EILFKIFKQLDPENTGTIQLDLIS 181
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 59.7 bits (144), Expect = 4e-11
Identities = 27/157 (17%), Positives = 48/157 (30%), Gaps = 16/157 (10%)
Query: 383 AMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE 442
+N++ + S E + M MD D +G + E R
Sbjct: 44 ILNRIISKHKDLRTNGFSLESC---RSMVNLMDRDGNGKLGLVEFNILWNRI------RN 94
Query: 443 IRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQA 502
+ D+D SG++ E A + L D I D +
Sbjct: 95 YLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQ-LHQVIVARFADDELIIDFDNFVRC 153
Query: 503 CAEHNMTDVLLEDIIREVDQDNDGRI--DYGEFVAMM 537
+ L I +++D +N G I D +++
Sbjct: 154 LVRLEI----LFKIFKQLDPENTGTIQLDLISWLSFS 186
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 91.6 bits (227), Expect = 3e-23
Identities = 58/77 (75%), Positives = 67/77 (87%)
Query: 393 RVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADV 452
+ +AE LSEEEI GLKE+FK +DTDNSG ITFDELK GL+R GS L ++EI+DLMDAAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 453 DNSGTIDYGEFIAATVH 469
D SGTIDYGEFIAATVH
Sbjct: 71 DKSGTIDYGEFIAATVH 87
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 71.1 bits (174), Expect = 5e-16
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 454 NSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDV 511
+SG ID + A L++ E L F+ D D SG IT DEL+ + +
Sbjct: 2 SSGHIDDDDKHMAE-RLSEEEIGG-LKELFKMIDTDNSGTITFDELKDGLKRVGSELMES 59
Query: 512 LLEDIIREVDQDNDGRIDYGEFVAMM 537
++D++ D D G IDYGEF+A
Sbjct: 60 EIKDLMDAADIDKSGTIDYGEFIAAT 85
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 94.4 bits (233), Expect = 4e-23
Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 16/155 (10%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIR-----------DLMD 448
S+ + +K F +D D GAIT + ++ R+ +
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 449 AADVDNSGTIDYGEFIAATVHLNKLEREEH-----LVAAFQYFDKDGSGYITVDELQQAC 503
V ID FI + + K + L F+ D + I+ DE
Sbjct: 61 LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 504 AEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
+ + +D +NDG + EFV
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 94.1 bits (233), Expect = 6e-23
Identities = 28/156 (17%), Positives = 60/156 (38%), Gaps = 17/156 (10%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRD-LMDAADVDNSGT 457
++ E+ L FK + SG + + K ++ + L +A D +G+
Sbjct: 10 FTKRELQVLYRGFK--NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 67
Query: 458 IDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH----------- 506
+ + +F+ A L + E L F +D + GYI +E+
Sbjct: 68 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV 127
Query: 507 ---NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ ++ +++D++ DG + EF+ Q+
Sbjct: 128 LKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 163
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.0 bits (134), Expect = 8e-10
Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 14/129 (10%)
Query: 390 MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA 449
A +F A DT +G++ F++ L ++R +
Sbjct: 38 QIYAQFFPHGDASTYA--HYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNL 95
Query: 450 ADVDNSGTIDYGEFIAATVHLNKLER------------EEHLVAAFQYFDKDGSGYITVD 497
D++ G I+ E + + + +H+ FQ DK+ G +T+D
Sbjct: 96 YDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 155
Query: 498 ELQQACAEH 506
E ++C E
Sbjct: 156 EFLESCQED 164
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.6 bits (94), Expect = 2e-04
Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Query: 476 EEHLVAAFQYFDK-DGSGYITVDELQQACAEHNMT---DVLLEDIIREVDQDNDGRIDYG 531
+ L ++ F SG + + +Q A+ + D G + +
Sbjct: 12 KRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFE 71
Query: 532 EFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563
+FV + G +R + N+ + G
Sbjct: 72 DFVTALSILLRGTVHEKLRWTFNLYDINKDGY 103
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 37.1 bits (85), Expect = 0.002
Identities = 10/73 (13%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 374 VLSRLKQFSAMNKLKKMALRVIAESLSEEEIAG-LKEMFKAMDTDNSGAITFDELKAGLR 432
+++ + + + M + L E+ + F+ MD + G +T DE +
Sbjct: 103 YINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ 162
Query: 433 RYGSTLKDTEIRD 445
+ ++ ++
Sbjct: 163 EDDNIMRSLQLFQ 175
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 93.2 bits (230), Expect = 1e-22
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 26/165 (15%)
Query: 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLK---------------DTE 442
+++ + LK+ F D D +GA+ + + +
Sbjct: 3 AIASDR---LKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGL 59
Query: 443 IRDLMDAADVDNSGTIDYGEFIAATVHLN--------KLEREEHLVAAFQYFDKDGSGYI 494
L A V + G++ +FI T +L + DK+ G I
Sbjct: 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQI 119
Query: 495 TVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
DE M+ + +VD + +G + E + ++
Sbjct: 120 NADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 40.4 bits (93), Expect = 1e-04
Identities = 14/104 (13%), Positives = 34/104 (32%), Gaps = 19/104 (18%)
Query: 436 STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYIT 495
+ + ++ D D D +G ++ +F Q+ +
Sbjct: 2 TAIASDRLKKRFDRWDFDGNGALERADF----------------EKEAQHIAEAFGKDAG 45
Query: 496 VDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
E+Q N L + + +E +DG + +F+ + +
Sbjct: 46 AAEVQTL---KNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTEN 86
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 38.9 bits (89), Expect = 6e-04
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEI 443
E F +DT+ +G ++ DEL +R + D E+
Sbjct: 138 AAEAFNQVDTNGNGELSLDELLTAVRDFHFGRLDVEL 174
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 92.8 bits (229), Expect = 2e-22
Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 25/166 (15%)
Query: 399 LSEEEIAGLKEMFKAM-DTDNSGAITFDELKAGLRRYGSTLK---------------DTE 442
L++ + +K F D ++ G+I ++ + + RY K + E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 443 IRDLMDAADVDNSGTIDYGEFIAATVHL---------NKLEREEHLVAAFQYFDKDGSGY 493
RDL AD++ + + E++A + + F+ D G G
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 494 ITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ ++E Q C + + + + D + + +
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYYR 167
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 92.0 bits (227), Expect = 3e-22
Identities = 35/164 (21%), Positives = 57/164 (34%), Gaps = 23/164 (14%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGL-----RRYGSTLKDTEIRDLMDAADVD 453
+ I K MF +D +++G I+ DE+ G+T + + A
Sbjct: 6 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 65
Query: 454 NSGT-----IDYGEFIAATVHLNKLEREEH-----------LVAAFQYFDKDGSGYITVD 497
+G D+ +I L E E++ A F DKD +G IT+D
Sbjct: 66 GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 125
Query: 498 ELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
E + + E+ R D D G++D E
Sbjct: 126 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 169
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 50.7 bits (120), Expect = 5e-08
Identities = 31/157 (19%), Positives = 47/157 (29%), Gaps = 11/157 (7%)
Query: 310 FDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRS 369
D G I + + A D++ L + P + H E
Sbjct: 21 LDVNHNGKISLDE-----MVYKASDIVINNLGATPEQ------AKRHKDAVEAFFGGAGM 69
Query: 370 LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKA 429
KL L A++ +F +D D +GAIT DE KA
Sbjct: 70 KYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKA 129
Query: 430 GLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 466
+ G + + D+D SG +D E
Sbjct: 130 YTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ 166
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 91.2 bits (225), Expect = 5e-22
Identities = 32/154 (20%), Positives = 65/154 (42%), Gaps = 14/154 (9%)
Query: 399 LSEEEIAGLKEMFKAMDTD--NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSG 456
S EI L E+FK + + + G I +E + L + + + D D ++G
Sbjct: 11 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNG 69
Query: 457 TIDYGEFIAAT-VHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE---------- 505
+ + EF A V ++ + +FQ +D G+I E++Q
Sbjct: 70 ILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLK 129
Query: 506 HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ + +++ E D +DG+ID E+ +++ +
Sbjct: 130 DTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR 163
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 39.9 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 408 KEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD 448
+ F+ DT + G I +E ++ + R+ S LK+ ++ L D
Sbjct: 138 DKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYLKD 178
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.6 bits (221), Expect = 7e-22
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 8/138 (5%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAA--DVDNSGTIDYGEFI 464
KE F+ D G I + + +R G + E+ ++ D S +D+ F+
Sbjct: 2 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFL 61
Query: 465 A---ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLLEDIIRE 519
A E + F+ FDK+G+G + EL+ MT+ +E ++
Sbjct: 62 PMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVL-A 120
Query: 520 VDQDNDGRIDYGEFVAMM 537
+D++G I+Y F+ +
Sbjct: 121 GHEDSNGCINYEAFLKHI 138
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 88.1 bits (218), Expect = 9e-22
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 9/109 (8%)
Query: 435 GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYI 494
L +I + T + +F L+K + F++ D D SGY+
Sbjct: 3 TDILSAEDIAAALQECQDP--DTFEPQKFFQT-SGLSK-MSASQVKDIFRFIDNDQSGYL 58
Query: 495 TVDELQQACAE-----HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538
DEL+ + +T+ + ++ D D DG+I EF M+
Sbjct: 59 DGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 63.8 bits (155), Expect = 3e-13
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY---GSTLKDTEIRDLMDAADVDN 454
LS+ + +K++F+ +D D SG + DELK L+++ L ++E + LMDAAD D
Sbjct: 34 GLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDG 93
Query: 455 SGTIDYGEFIA 465
G I EF
Sbjct: 94 DGKIGADEFQE 104
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 86.2 bits (213), Expect = 5e-21
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVD 497
L +I+ + A + + D+ +F V L K + + + F DKD SG+I D
Sbjct: 6 LSAEDIKKAIGA--FTAADSFDHKKFFQM-VGLKK-KSADDVKKVFHILDKDKSGFIEED 61
Query: 498 ELQQACAE-----HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
EL +++ + ++ D+D DG+I EF ++ +
Sbjct: 62 ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 58.8 bits (142), Expect = 2e-11
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR---YGSTLKDTEIRDLMDAADVDN 454
L ++ +K++F +D D SG I DEL + L+ L E + LM A D D
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDG 93
Query: 455 SGTIDYGEFIA 465
G I EF
Sbjct: 94 DGKIGVEEFST 104
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 88.7 bits (219), Expect = 6e-21
Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 382 SAMNKLKKMALRVIAES--LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLK 439
S L K L + + +EEE++ + F SG IT E + ++
Sbjct: 3 SKSGALSKEILEELQLNTKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEAD 60
Query: 440 DTEIRD-LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDE 498
+ + D ++ GT+D+ E++ A + + + L AF +D DG+G I+ +E
Sbjct: 61 PKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
Query: 499 LQQAC----------------AEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ + + N + E I + +D ++ EF+
Sbjct: 121 VLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLA 177
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 53.3 bits (127), Expect = 9e-09
Identities = 22/145 (15%), Positives = 49/145 (33%), Gaps = 16/145 (11%)
Query: 392 LRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAAD 451
+ A + +F++ D ++ G + F E L + + ++ D
Sbjct: 52 YSKFFPEADPKAYA--QHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYD 109
Query: 452 VDNSGTIDYGEFIAATVHLNKL--------------EREEHLVAAFQYFDKDGSGYITVD 497
VD +GTI E + + K+ E+ + +F K +T
Sbjct: 110 VDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEK 169
Query: 498 ELQQACAEHNMTDVLLEDIIREVDQ 522
E + + L++ ++V +
Sbjct: 170 EFIEGTLANKEILRLIQFEPQKVKE 194
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 37.9 bits (87), Expect = 0.001
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 476 EEHLVAAFQYFDKD-GSGYITVDELQQACAE---HNMTDVLLEDIIREVDQDNDGRIDYG 531
EE L + +Q F K+ SG IT E Q ++ + + R D ++DG +D+
Sbjct: 24 EEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFK 83
Query: 532 EFVAMMQKGNVGLGRRTMRNSLNMSMRDAPG 562
E+V + + G + + + ++ D G
Sbjct: 84 EYVIALHMTSAGKTNQKLEWAFSLYDVDGNG 114
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 88.5 bits (218), Expect = 7e-21
Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 23/171 (13%)
Query: 392 LRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAG-----LRRYGSTLKDTEIRDL 446
+++ + + I K MF +D + +G IT DE+ + + +T + T+ +
Sbjct: 1 VKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQV 60
Query: 447 MDAAD-----VDNSGTIDYGEFIAATVHL-----------NKLEREEHLVAAFQYFDKDG 490
A ++ I + +F+ L E A F FDKDG
Sbjct: 61 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDG 120
Query: 491 SGYITVDELQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
SG IT+DE + + + E R D DN G +D E
Sbjct: 121 SGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG 171
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 51.2 bits (121), Expect = 5e-08
Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 11/158 (6%)
Query: 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDR 368
D G I + ++S ++ D+ K+ T + H E
Sbjct: 22 FLDINGNGKITLDE----IVSKASDDICAKL-------EATPEQTKRHQVCVEAFFRGCG 70
Query: 369 SLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELK 428
++ + +L L+ A + +F D D SG IT DE K
Sbjct: 71 MEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 130
Query: 429 AGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 466
A + G + + D+DN+G +D E
Sbjct: 131 AYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ 168
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 85.1 bits (209), Expect = 3e-20
Identities = 30/146 (20%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
L +++I +KE F +D D G ++ +++KA + G D E+ ++ + G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPL 56
Query: 459 DYGEFIA-ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLLED 515
++ F++ + L+ + EE + AF FD+ + + ++ ++ N +
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 516 IIREVDQDNDGRIDYGEFVAMMQKGN 541
+E + G+ DY +F AM++
Sbjct: 117 TFKEAPVE-GGKFDYVKFTAMIKGSG 141
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 86.4 bits (213), Expect = 4e-20
Identities = 37/211 (17%), Positives = 70/211 (33%), Gaps = 37/211 (17%)
Query: 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACK-----SISKRKLISREDVEDVR-REIQIM 153
+ +G+ +G+G+ + C E K S +K+ + D D+ + I
Sbjct: 1 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIR 59
Query: 154 HHLAGHKNIVTIKGAYE----DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRII 209
+ + ++G ++MEL + E+ +I
Sbjct: 60 SARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAK-------ELYRVRVENPDEVLDMI 112
Query: 210 VGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYV 269
+ V + G++H DL N L+ + + IDF SV G +
Sbjct: 113 LEEVAKFYHRGIVHGDLSQYNVLV----SEEGIWIIDFPQSV-------EVGEEGWREIL 161
Query: 270 APEV------LLKHYGPEADVWTAGVILYIL 294
+V + Y E D+ + I IL
Sbjct: 162 ERDVRNIITYFSRTYRTEKDINS--AIDRIL 190
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 86.0 bits (212), Expect = 4e-20
Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 17/161 (10%)
Query: 389 KMALRVIAESLSEEEIA-GLKEMFKAMDTDNSGAITFDELKAGLRRYGST--------LK 439
++ + +EE+I G + +F + I+ EL+ LRR +
Sbjct: 1 EIEANIEEIEANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFS 59
Query: 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDEL 499
+ ++D D D SG + EF + ++ D D SG + E+
Sbjct: 60 IETCKIMVDMLDEDGSGKLGLKEFYILWTK------IQKYQKIYREIDVDRSGTMNSYEM 113
Query: 500 QQACAE-HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
++A E L +I D++ ID+ FV + +
Sbjct: 114 RKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR 154
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 67.1 bits (163), Expect = 2e-13
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 408 KEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 467
+++++ +D D SG + E++ L G L + ++ A D+ ID+ F+
Sbjct: 94 QKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQ-LHQVIVARFADDELIIDFDNFVRCL 152
Query: 468 VHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
V L E L F+ D + +G I +D +
Sbjct: 153 VRL------EILFKIFKQLDPENTGTIQLDLIS 179
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 45.9 bits (108), Expect = 2e-06
Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 11/85 (12%)
Query: 467 TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQAC----------AEHNMTDVLLEDI 516
+ N+ + + F I+ ELQ + + +
Sbjct: 8 EIEANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIM 66
Query: 517 IREVDQDNDGRIDYGEFVAMMQKGN 541
+ +D+D G++ EF + K
Sbjct: 67 VDMLDEDGSGKLGLKEFYILWTKIQ 91
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.7 bits (209), Expect = 7e-20
Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 16/140 (11%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYG-----STLKDTEIRDLMDAADVDNSGTIDYG 461
+ F A+ G + +EL+ L + G S R ++ D D++G + +
Sbjct: 2 VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 462 EFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIRE 519
F F D+DGSG + EL+QA + ++ L I++
Sbjct: 61 AFKELWAA------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114
Query: 520 VDQDNDGRIDYGEFVAMMQK 539
+ +GRI + ++VA K
Sbjct: 115 YSK--NGRIFFDDYVACCVK 132
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.0 bits (171), Expect = 8e-15
Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 8/91 (8%)
Query: 410 MFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469
F +D D SG + EL+ + G L + ++ + G I + +++A V
Sbjct: 75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKN--GRIFFDDYVACCVK 132
Query: 470 LNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
L L F+ D G
Sbjct: 133 L------RALTDFFRKRDHLQQGSANFIYDD 157
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 81.0 bits (200), Expect = 9e-20
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 476 EEHLVAAFQYFDKDGSGYITVDELQ---QACAEHNMTDVLLEDIIREVDQDNDGRIDYGE 532
EE ++ AF+ FD +G G I DE + Q E +TD +E+ ++E D+D +G ID E
Sbjct: 1 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 60
Query: 533 FVAMMQK 539
F+ +++K
Sbjct: 61 FMDLIKK 67
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 66.4 bits (162), Expect = 1e-14
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 401 EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTEIRDLMDAADVDNSGTID 459
EEE + FK D + G I FDE K +++ G L D E+ + M AD D +G ID
Sbjct: 1 EEE---ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 57
Query: 460 YGEFIA 465
EF+
Sbjct: 58 IPEFMD 63
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 35.6 bits (82), Expect = 0.001
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 387 LKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR 433
K + +V E L++ E+ +E K D D +G I E +++
Sbjct: 24 FKFIMQKVGEEPLTDAEV---EEAMKEADEDGNGVIDIPEFMDLIKK 67
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.4 bits (208), Expect = 1e-19
Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 17/158 (10%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST---LKDTEIRD-LMDAADVD- 453
L+++EI F + ++ + LK ++ +
Sbjct: 11 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSP 70
Query: 454 NSGTIDYGEFIAA-TVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE------- 505
++ + +F+ +V + + AF+ FD D G + ++L +
Sbjct: 71 AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGED 130
Query: 506 ----HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ L+++I+ E D D DG I+ EF ++ +
Sbjct: 131 TRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 168
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.5 bits (107), Expect = 3e-06
Identities = 16/110 (14%), Positives = 38/110 (34%), Gaps = 11/110 (10%)
Query: 408 KEMFKAMDTD-NSGAITFDELKAGLRRY-GSTLKDTEIRDLMDAADVDNSGTIDYGEF-- 463
+ + + T +++F++ L + + D + D D+ GT++ +
Sbjct: 60 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSR 119
Query: 464 -------IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH 506
L+ E ++ + + D D G I + E Q +
Sbjct: 120 LVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 169
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 78.8 bits (194), Expect = 7e-19
Identities = 25/71 (35%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYG 531
+ E ++ AF+ FD D SG IT+ +L++ E N+T+ L+++I E D+++D ID
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Query: 532 EFVAMMQKGNV 542
EF+ +M+K ++
Sbjct: 66 EFIRIMKKTSL 76
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 64.5 bits (157), Expect = 8e-14
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTID 459
S EE + + F+ D DNSG IT +L+ + G L + E+++++ AD ++ ID
Sbjct: 7 SREE---ILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 460 YGEFIA 465
EFI
Sbjct: 64 EDEFIR 69
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 35.2 bits (81), Expect = 0.002
Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 389 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR 433
+ + + E+L+EEE+ +EM D ++ I DE +++
Sbjct: 32 RRVAKELGENLTEEEL---QEMIAEADRNDDNEIDEDEFIRIMKK 73
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.3 bits (200), Expect = 1e-18
Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 16/148 (10%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG-----STLKDTEIRDLMDAADVD 453
+ L F A+ G I DEL+ L + G R ++ D D
Sbjct: 1 FPGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 59
Query: 454 NSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDV 511
SGT+ + EF LN + FD D SG + ELQ+A ++
Sbjct: 60 MSGTMGFNEFKELWAVLNGWRQHFIS------FDTDRSGTVDPQELQKALTTMGFRLSPQ 113
Query: 512 LLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ I + +G+I + +++A K
Sbjct: 114 AVNSIAKRY--STNGKITFDDYIACCVK 139
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.3 bits (148), Expect = 1e-11
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 409 EMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468
+ F + DTD SG + EL+ L G L + + +G I + ++IA V
Sbjct: 81 QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK--RYSTNGKITFDDYIACCV 138
Query: 469 HLNKLEREEHLVAAFQYFDKDGSGYITVD 497
L L +F+ D G +
Sbjct: 139 KL------RALTDSFRRRDTAQQGVVNFP 161
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 78.0 bits (192), Expect = 3e-18
Identities = 14/81 (17%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 466 ATVHLNKLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQAC----AEHNMTDVLLEDIIR 518
A L +LE E +V F + ++G ++V+E ++ L++ ++
Sbjct: 2 AAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMK 61
Query: 519 EVDQDNDGRIDYGEFVAMMQK 539
+D + D + + E+ ++ +
Sbjct: 62 SLDVNQDSELKFNEYWRLIGE 82
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 53.0 bits (127), Expect = 2e-09
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 6/95 (6%)
Query: 396 AESLS--EEEIAGLKEMF-KAMDTD-NSGAITFDELKAGLRRYGSTLKDT--EIRDLMDA 449
AE L+ EE I + F + +++ +E K + + L + + M +
Sbjct: 3 AEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKS 62
Query: 450 ADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQ 484
DV+ + + E+ L K R++ + +
Sbjct: 63 LDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRK 97
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 76.1 bits (187), Expect = 7e-18
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 472 KLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLLEDIIREVDQDNDGRID 529
K + EE L F+ FDK+ G+I ++EL + ++ + +ED++++ D++NDGRID
Sbjct: 4 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRID 63
Query: 530 YGEFVAMMQ 538
+ EF+ MM+
Sbjct: 64 FDEFLKMME 72
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 63.0 bits (153), Expect = 3e-13
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNS 455
A+ SEEE L F+ D + G I +EL LR G + + +I DLM +D +N
Sbjct: 3 AKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNND 59
Query: 456 GTIDYGEFIA 465
G ID+ EF+
Sbjct: 60 GRIDFDEFLK 69
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 77.8 bits (190), Expect = 1e-17
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 466
K++F D GAI D L LR G + ++D+++A + + I
Sbjct: 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITG 63
Query: 467 TVHLN-------KLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDII 517
+ +N + E V AFQ FDK+ +G ++V +L+ +TD +++++
Sbjct: 64 LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 123
Query: 518 REVDQDNDGRIDYGEFVAMMQK 539
+ V+ D++G IDY +F+ + +
Sbjct: 124 KGVEVDSNGEIDYKKFIEDVLR 145
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 77.4 bits (189), Expect = 2e-17
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 399 LSEEEIAGLKEMFKAMDT--DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA-ADVDNS 455
LS++EI LK++F+ D GA+ +L R G ++ ++ + + S
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60
Query: 456 GTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQA--CAEHNMTDVLL 513
+ + + + AF+ FD++G G+I+ EL+ ++D +
Sbjct: 61 LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 120
Query: 514 EDIIREVD--QDNDGRIDYGEFVAMMQKGNV 542
++II+ D +D +G + Y +FV + G
Sbjct: 121 DEIIKLTDLQEDLEGNVKYEDFVKKVMAGPY 151
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 74.2 bits (182), Expect = 4e-17
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 472 KLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLLEDIIREVDQDNDGRID 529
K + EE L F+ FDK+ GYI ++EL+ +T+ +E+++++ D++NDGRID
Sbjct: 10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 69
Query: 530 YGEFVAMMQK 539
Y EF+ M+
Sbjct: 70 YDEFLEFMKG 79
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 63.1 bits (153), Expect = 3e-13
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNS 455
++ +EEE L ++F+ D + G I +ELK L+ G T+ + +I +LM D +N
Sbjct: 9 SKGKTEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND 65
Query: 456 GTIDYGEFIA 465
G IDY EF+
Sbjct: 66 GRIDYDEFLE 75
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 42.6 bits (100), Expect = 5e-06
Identities = 15/57 (26%), Positives = 22/57 (38%)
Query: 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDE 498
E+ DL D + G ID E + E+ + + DK+ G I DE
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.0 bits (188), Expect = 4e-17
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDN 454
+ +EI L + FK +D DNSG+++ +E + ++ ++ ++D D D
Sbjct: 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDG 61
Query: 455 SGTIDYGEFIAATVHLNK-LEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN------ 507
+G +D+ EFI + ++E+ L AF+ +D D GYI+ EL Q
Sbjct: 62 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 121
Query: 508 -MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV 542
+++ I D+D DGRI + EF A++ ++
Sbjct: 122 TQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDI 157
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 73.5 bits (180), Expect = 6e-17
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNS 455
+ +L+EE+IA KE F D DN+G+I+ EL +R G + + E+ DLM+ DVD +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 456 GTIDYGEFIA 465
I++ EF+A
Sbjct: 61 HQIEFSEFLA 70
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 67.3 bits (164), Expect = 9e-15
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYG 531
E+ AF FDKD +G I+ EL + ++ + D++ E+D D + +I++
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 532 EFVAMMQK 539
EF+A+M +
Sbjct: 67 EFLALMSR 74
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 75.2 bits (183), Expect = 8e-17
Identities = 28/132 (21%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 409 EMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIA--- 465
+FK +D + GA++++E+KA + + + + ++ + + D D +G ID EF
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 466 ATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDND 525
+ + + + L ++ D DG G +T +E+ + + + + D + D
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFF--KKHGIEKVAEQVMKADANGD 121
Query: 526 GRIDYGEFVAMM 537
G I EF+
Sbjct: 122 GYITLEEFLEFS 133
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 76.1 bits (186), Expect = 9e-17
Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 16/147 (10%)
Query: 402 EEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT--------EIRDLMDAADVD 453
EE+ + +F + D+ ++ EL L + + D R ++ D D
Sbjct: 1 EEVRQFRRLFAQLAGDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 454 NSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQA-CAEHNMTDVL 512
+G + + + A ++ FD D SG I EL A A +
Sbjct: 60 TTGKLGF------EEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH 113
Query: 513 LEDIIREVDQDNDGRIDYGEFVAMMQK 539
L +I D G +D+ F++ + +
Sbjct: 114 LYSMIIRRYSDEGGNMDFDNFISCLVR 140
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 66.1 bits (160), Expect = 2e-13
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 408 KEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 467
+ ++K D D SG I EL G L + ++ D G +D+ FI+
Sbjct: 80 QAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCL 138
Query: 468 VHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
V L + + AF+ DKDG+G I V+ +
Sbjct: 139 VRL------DAMFRAFKSLDKDGTGQIQVNIQE 165
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 74.3 bits (181), Expect = 2e-16
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Query: 402 EEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYG 461
+ + K+ F D +G I + LR G EI + +++ +
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITE-IESTLPAEVDMEQFL 60
Query: 462 EFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLLEDIIRE 519
+ + + E V FQ FDKD +G I V EL+ +++ ++++++
Sbjct: 61 QVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKG 120
Query: 520 VDQDNDGRIDYGEFVAMM 537
V DG ++Y +FV M+
Sbjct: 121 VP-VKDGMVNYHDFVQMI 137
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 70.8 bits (173), Expect = 4e-16
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 476 EEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEF 533
EE + AF+ FDKDG+GYI+ EL+ +TD ++++IRE D D DG+++Y EF
Sbjct: 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 61
Query: 534 VAMM 537
V MM
Sbjct: 62 VQMM 65
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.2 bits (148), Expect = 9e-13
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTID 459
SEEEI +E F+ D D +G I+ EL+ + G L D E+ +++ AD+D G ++
Sbjct: 1 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 57
Query: 460 YGEFIA 465
Y EF+
Sbjct: 58 YEEFVQ 63
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 38.1 bits (88), Expect = 1e-04
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDE 498
EIR+ D D +G I E +L + +E + + D DG G + +E
Sbjct: 4 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 60
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 70.8 bits (173), Expect = 5e-16
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
LSEE IA K F D D G I+ EL +R G E+ +++ D D SGTI
Sbjct: 8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 67
Query: 459 DYGEFIA 465
D+ EF+
Sbjct: 68 DFEEFLV 74
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 70.4 bits (172), Expect = 8e-16
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYG 531
E AAF FD DG G I+ EL N T L+ II EVD+D G ID+
Sbjct: 11 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 70
Query: 532 EFVAMMQK 539
EF+ MM +
Sbjct: 71 EFLVMMVR 78
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 70.0 bits (171), Expect = 8e-16
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 482 AFQYFDKDGSGYITVDELQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
F+ FDK+ G +++DE ++ T + E+D D +G ++ EF + ++K
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 62.7 bits (152), Expect = 3e-13
Identities = 13/60 (21%), Positives = 26/60 (43%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 466
K +F+ D + G ++ DE + + +I + DVD +G ++ EF +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 44.5 bits (105), Expect = 7e-07
Identities = 13/62 (20%), Positives = 26/62 (41%)
Query: 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
+ + + + D + G + EF + + +E +V F+ D DG+G + DE
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60
Query: 501 QA 502
Sbjct: 61 SC 62
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 69.6 bits (170), Expect = 2e-15
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 393 RVIAESLSEEEIAGLKEMFKAMDTDNS-GAITFDELKAGLRRYGSTLKDTEIRDLMDAAD 451
+ E L+EE+ K F G+I+ EL +R G E+++++D D
Sbjct: 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 62
Query: 452 VDNSGTIDYGEFIA 465
D SGT+D+ EF+
Sbjct: 63 EDGSGTVDFDEFLV 76
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 66.2 bits (161), Expect = 3e-14
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 465 AATVHLNKLEREEHLVAAFQYFDKDGS-GYITVDELQQACAEH--NMTDVLLEDIIREVD 521
AA L + ++ E AAF F G I+ EL + N T L+++I EVD
Sbjct: 4 AAVEQLTEEQKNE-FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 62
Query: 522 QDNDGRIDYGEFVAMMQK 539
+D G +D+ EF+ MM +
Sbjct: 63 EDGSGTVDFDEFLVMMVR 80
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 68.5 bits (167), Expect = 3e-15
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
L+EE+IA KE F D D G IT EL +R G + E++D+++ D D +GTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 459 DYGEFIA 465
D+ EF+
Sbjct: 62 DFPEFLT 68
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 65.0 bits (158), Expect = 4e-14
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYG 531
E+ AF FDKDG G IT EL N T+ L+D+I EVD D +G ID+
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 532 EFVAMMQK 539
EF+ MM +
Sbjct: 65 EFLTMMAR 72
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 68.7 bits (168), Expect = 3e-15
Identities = 14/76 (18%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 470 LNKLERE-EHLVAAFQ-YFDKDGSGYI-TVDELQQACAE---HNMTDVLLEDIIREVDQD 523
L +LE+ ++ + Y G+ + D+L++ + + +E+D +
Sbjct: 2 LTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDIN 61
Query: 524 NDGRIDYGEFVAMMQK 539
DG +++ EF+ ++ K
Sbjct: 62 TDGAVNFQEFLILVIK 77
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 45.2 bits (107), Expect = 7e-07
Identities = 10/68 (14%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 401 EEEIAGLKEMF-KAMDTDNSGAI-TFDELKAGLRR-YGSTLKDTEIRDLMDAADVDNSGT 457
E+ + + +++ K + D+LK L ++ D++ G
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGA 65
Query: 458 IDYGEFIA 465
+++ EF+
Sbjct: 66 VNFQEFLI 73
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 74.3 bits (181), Expect = 4e-15
Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 25/180 (13%)
Query: 385 NKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIR 444
+ LR LSEE+ L+++F + SG +F +LK L +Y T+ + ++
Sbjct: 102 DASGYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLK 161
Query: 445 DLMDAADVDNSGTIDYGEFIAATVHLN--------KLEREEHLVAAFQYFDKDGSGYITV 496
L + D G + Y +A L ++ ++ +
Sbjct: 162 KLFVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDK 221
Query: 497 DELQQACAEHNMTDVLLEDIIREV-----------------DQDNDGRIDYGEFVAMMQK 539
+Q A + D + E D D G++ E +++
Sbjct: 222 KSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLED 281
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 70.8 bits (172), Expect = 6e-14
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 482 AFQYFDKDGSGYITVDELQQACAE---HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537
+ + D D SG ++ +E+Q+ + E VD D+ + Y EFV ++
Sbjct: 258 LYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLV 316
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 54.6 bits (130), Expect = 1e-08
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 409 EMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTEIRDLMDAADVDNSGTIDYGEFIA 465
++ D D SG ++ +E++ L + DVD+S ++ Y EF+
Sbjct: 257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 68.4 bits (167), Expect = 4e-15
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE-HNMTDVLLEDIIREVDQDNDGRIDYGE 532
+ F+ FD +G G I+ EL A ++T + ++ E+D D DG I + E
Sbjct: 3 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDE 62
Query: 533 FVAMMQK 539
F +
Sbjct: 63 FTDFARA 69
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 68.0 bits (166), Expect = 5e-15
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTID 459
+ ++IA + +FK DT+ G I+ EL L+ GS + E+R +M D D G I
Sbjct: 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFIS 59
Query: 460 YGEFIAATVHLNKLERE 476
+ EF L ++
Sbjct: 60 FDEFTDFARANRGLVKD 76
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 34.5 bits (79), Expect = 0.004
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 393 RVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE 442
++L ++ M +DTD G I+FDE R +KD
Sbjct: 29 GDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRGLVKDVS 78
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 67.6 bits (165), Expect = 9e-15
Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 473 LERE-EHLVAAFQ-YFDKDGSGY-ITVDELQQACAE-------HNMTDVLLEDIIREVDQ 522
LE+ + +V+ F Y K+G + + EL++ + + ++ +D
Sbjct: 4 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS 63
Query: 523 DNDGRIDYGEFVAMMQK 539
+ D +D+ E+ +
Sbjct: 64 NRDNEVDFQEYCVFLSC 80
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 54.1 bits (130), Expect = 6e-10
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 7/72 (9%)
Query: 401 EEEIAGLKEMFKAMDT--DNSGAITFDELKAGLRRYGSTLK-----DTEIRDLMDAADVD 453
E+ + + F + + ELK L R + + + LM D +
Sbjct: 5 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 64
Query: 454 NSGTIDYGEFIA 465
+D+ E+
Sbjct: 65 RDNEVDFQEYCV 76
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 66.4 bits (162), Expect = 2e-14
Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 474 EREEHLVAAFQYFD--KDGSGYITVDELQQA----CAEHNMTDVLLEDIIREVDQDNDGR 527
+ L + F+ + + ++ +EL+Q L+D+ +E+D++ DG
Sbjct: 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGE 63
Query: 528 IDYGEFVAMMQK 539
+ + EF +++K
Sbjct: 64 VSFEEFQVLVKK 75
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 60.2 bits (146), Expect = 3e-12
Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 400 SEEEIAGLKEMFKAMDT--DNSGAITFDELKAGLRRYGSTLKDT--EIRDLMDAADVDNS 455
+++ A LK +F+ + ++ +ELK ++ +L + DL D +
Sbjct: 2 AQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGD 61
Query: 456 GTIDYGEFIAATVHLNK 472
G + + EF +++
Sbjct: 62 GEVSFEEFQVLVKKISQ 78
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 65.7 bits (160), Expect = 3e-14
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 473 LEREEHLVAAFQYFDKD--GSGYITVDELQQACAE----HNMTDVLLEDIIREVDQDNDG 526
++ E + AF+ F I+ +EL+ L+++I EVD++ DG
Sbjct: 1 MKSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDG 60
Query: 527 RIDYGEFVAMMQK 539
+ + EF+ MM+K
Sbjct: 61 EVSFEEFLVMMKK 73
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 55.7 bits (134), Expect = 1e-10
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG--STLKDTEIRDLMDAADVDNSGT 457
S EEI G E+F A + I+ +ELK ++ G + + ++++ D + G
Sbjct: 3 SPEEIKGAFEVF-AAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 458 IDYGEFIA 465
+ + EF+
Sbjct: 62 VSFEEFLV 69
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 65.2 bits (159), Expect = 7e-14
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDGSGY-ITVDELQQA-------CAEHNMTDVLLEDIIREVD 521
LE+ +V FQ Y + G Y + EL++ + + +D
Sbjct: 3 PLEQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLD 62
Query: 522 QDNDGRIDYGEFVAMMQK 539
+ D +D+ E+V +
Sbjct: 63 TNKDCEVDFVEYVRSLAC 80
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 47.1 bits (112), Expect = 2e-07
Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 7/72 (9%)
Query: 401 EEEIAGLKEMF-KAMDTDNSG-AITFDELKAGLRRYGST-----LKDTEIRDLMDAADVD 453
E+ +A + F + + ELK L++ +T ++ + M D +
Sbjct: 5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTN 64
Query: 454 NSGTIDYGEFIA 465
+D+ E++
Sbjct: 65 KDCEVDFVEYVR 76
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 64.6 bits (157), Expect = 1e-13
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQACAE-------HNMTDVLLEDIIREVD 521
+LE E L+ F + K+G ++ EL+ ++ I++E+D
Sbjct: 3 ELETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELD 62
Query: 522 QDNDGRIDYGEFVAMMQK 539
++ DG +D+ EFV ++
Sbjct: 63 ENGDGEVDFQEFVVLVAA 80
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 50.7 bits (121), Expect = 1e-08
Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 15/99 (15%)
Query: 398 SLSEEEIAGLKEMF-KAMDTD-NSGAITFDELKAGLRRYGST-----LKDTEIRDLMDAA 450
S E + L +F + + ++ ELK L+ S+ + +M
Sbjct: 2 SELETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKEL 61
Query: 451 DVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKD 489
D + G +D+ EF+ L VA +F ++
Sbjct: 62 DENGDGEVDFQEFVVLVAAL--------TVACNNFFWEN 92
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 64.1 bits (156), Expect = 1e-13
Identities = 14/75 (18%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 473 LERE-EHLVAAFQ-YFDKDGSGY-ITVDELQQA-----CAEHNMTDVLLEDIIREVDQDN 524
L++ LVA F Y ++G + ++ EL++ + D + ++ ++D++
Sbjct: 4 LDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNK 63
Query: 525 DGRIDYGEFVAMMQK 539
D +++ E+V +
Sbjct: 64 DQEVNFQEYVTFLGA 78
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 40.2 bits (94), Expect = 4e-05
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 401 EEEIAGLKEMF-KAMDTDNSG-AITFDELKAGLRRYGST---LKDTEIRDLMDAADVDNS 455
++ I L +F K + ++ ELK +++ + L+D EI LM+ D +
Sbjct: 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 64
Query: 456 GTIDYGEFIA 465
+++ E++
Sbjct: 65 QEVNFQEYVT 74
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 63.8 bits (155), Expect = 2e-13
Identities = 15/76 (19%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 472 KLERE-EHLVAAFQYFDKDGSGYITVDELQQACAE-------HNMTDVLLEDIIREVDQD 523
++E E ++ F F D GY+T ++L+ + + + ++ I++++DQ
Sbjct: 3 QMEHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQC 61
Query: 524 NDGRIDYGEFVAMMQK 539
DG++ + F +++
Sbjct: 62 RDGKVGFQSFFSLIAG 77
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 51.5 bits (123), Expect = 5e-09
Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 6/78 (7%)
Query: 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST-----LKDTEIRDLMDAADV 452
S E + + F D G +T ++L+ + + + +M D
Sbjct: 2 SQMEHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQ 60
Query: 453 DNSGTIDYGEFIAATVHL 470
G + + F + L
Sbjct: 61 CRDGKVGFQSFFSLIAGL 78
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.5 bits (154), Expect = 2e-12
Identities = 15/143 (10%), Positives = 35/143 (24%), Gaps = 21/143 (14%)
Query: 414 MDTDNSGAITFDELKAGLRRYGSTLKDT--EIRDLMDAADVDNSGTIDYGEFIAATVHLN 471
M ++ G I ++ D N + + ++
Sbjct: 16 MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSF--LMS 73
Query: 472 KLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLE------------DIIRE 519
R E + F + Y+T + L + + L +I +
Sbjct: 74 LCPRPE-IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDK 132
Query: 520 VDQD----NDGRIDYGEFVAMMQ 538
+ G++ V +
Sbjct: 133 YEPSGINAQRGQLSPEGMVWFLC 155
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.1 bits (88), Expect = 9e-04
Identities = 6/59 (10%), Positives = 11/59 (18%), Gaps = 4/59 (6%)
Query: 485 YFDKDGSGYITVDELQQACAEHNM----TDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539
+ G I V Q + D N + + +
Sbjct: 15 KMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMS 73
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.8 bits (147), Expect = 3e-12
Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 470 LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRID 529
++ E+ + F DKD G+++ E+++ + + LL I D + G++
Sbjct: 4 VSPAEKAK-YDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLS 62
Query: 530 YGEFVAMM 537
+F
Sbjct: 63 KDQFALAF 70
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (133), Expect = 2e-10
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
+S E A E+F D D G ++ E++ + + L T + + D + G +
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK--TGLPSTLLAHIWSLCDTKDCGKL 61
Query: 459 DYGEFIAATVHL 470
+F A HL
Sbjct: 62 SKDQFALA-FHL 72
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 60.5 bits (146), Expect = 3e-12
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 468 VHLNKLEREEHLV-AAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDG 526
+ L +L + ++ + +G + + + + D++L I D D G
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKG 60
Query: 527 RIDYGEFVAMMQ 538
+ EF ++
Sbjct: 61 VLSKQEFFVALR 72
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.0 bits (106), Expect = 1e-06
Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDN 454
++ + ++ ++ ++ N+G + + A L++ G D + + D AD D
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGL--PDLILGKIWDLADTDG 58
Query: 455 SGTIDYGEFIAA 466
G + EF A
Sbjct: 59 KGVLSKQEFFVA 70
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 62.8 bits (151), Expect = 4e-12
Identities = 25/145 (17%), Positives = 58/145 (40%), Gaps = 5/145 (3%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTEIRDLMDAADVDN 454
A + + + L +F+ +D D SG I+ +EL+ L + +R ++ D +N
Sbjct: 10 AAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDREN 69
Query: 455 SGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLE 514
+++ EF ++ + D G + + + ++D +
Sbjct: 70 KAGVNFSEFTGVWKYITDWQNVFR----TYDRDNSGMIDKNELKQALSGFGYRLSDQFHD 125
Query: 515 DIIREVDQDNDGRIDYGEFVAMMQK 539
+IR+ D+ G+I + +F+
Sbjct: 126 ILIRKFDRQGRGQIAFDDFIQGCIV 150
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.8 bits (125), Expect = 1e-08
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 410 MFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469
+F+ D DNSG I +ELK L +G L D L+ D G I + +FI +
Sbjct: 91 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 150
Query: 470 LNKLEREEHLVAAFQYFDKDGSGYITVDELQ 500
L +L F+ +D D G+I V Q
Sbjct: 151 LQRLTD------IFRRYDTDQDGWIQVSYEQ 175
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 58.9 bits (142), Expect = 6e-12
Identities = 20/60 (33%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 477 EHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFV 534
E V AFQ FDK+ +G ++V +L+ +TD ++++++ V+ D++G IDY +F+
Sbjct: 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.3 bits (138), Expect = 2e-11
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFI 464
+ F+ D +++G ++ +L+ L G L D E+ +L+ +VD++G IDY +FI
Sbjct: 3 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 38.5 bits (89), Expect = 1e-04
Identities = 7/57 (12%), Positives = 20/57 (35%)
Query: 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDE 498
+ D +++G + G+ L + + + + + D +G I +
Sbjct: 2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKK 58
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.1 bits (145), Expect = 6e-12
Identities = 13/84 (15%), Positives = 26/84 (30%), Gaps = 18/84 (21%)
Query: 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAE------------------HNMTDVLLED 515
+ F D + G + EL+ + + E
Sbjct: 13 PNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREH 72
Query: 516 IIREVDQDNDGRIDYGEFVAMMQK 539
+++ VD + D + EF+A Q+
Sbjct: 73 VMKNVDTNQDRLVTLEEFLASTQR 96
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (133), Expect = 2e-10
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 17/87 (19%)
Query: 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTE-------------- 442
+ L K F D ++ G + EL+A + + D +
Sbjct: 9 DGLDPNRFN-PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERL 67
Query: 443 --IRDLMDAADVDNSGTIDYGEFIAAT 467
+M D + + EF+A+T
Sbjct: 68 RMREHVMKNVDTNQDRLVTLEEFLAST 94
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (137), Expect = 4e-11
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 464 IAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVD 521
I A +H + F+ FD + I+ +E + C +TD + + E+
Sbjct: 7 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 66
Query: 522 QDNDGRIDYGEFVAMM 537
+ GR+ Y +F++
Sbjct: 67 VNAKGRLKYPDFLSRF 82
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.5 bits (125), Expect = 1e-09
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 392 LRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAAD 451
L + ++++ A + + F+ DT + I+ +E +A R L D + L +
Sbjct: 8 LARLHKAVTSHYHA-ITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 66
Query: 452 VDNSGTIDYGEFIAA 466
V+ G + Y +F++
Sbjct: 67 VNAKGRLKYPDFLSR 81
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 56.7 bits (137), Expect = 5e-11
Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 472 KLERE-EHLVAAFQ-YFDKDGSGY-ITVDELQQ-------ACAEHNMTDVLLEDIIREVD 521
KLE E +V F Y + G ++ EL+Q ++ ++++I + +D
Sbjct: 2 KLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLD 61
Query: 522 QDNDGRIDYGEFVAMMQK 539
+ D ++D+ EF++++
Sbjct: 62 ANQDEQVDFQEFISLVAI 79
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 41.3 bits (97), Expect = 1e-05
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 401 EEEIAGLKEMFK--AMDTDNSGAITFDELKAGLRR-----YGSTLKDTEIRDLMDAADVD 453
EE + G+ +F ++ + ++ ELK L + + I ++ D +
Sbjct: 4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN 63
Query: 454 NSGTIDYGEFI 464
+D+ EFI
Sbjct: 64 QDEQVDFQEFI 74
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (135), Expect = 1e-10
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
+ E+ A +F ++ +G ++ D++K L L + + + +D+D+ G +
Sbjct: 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGML 60
Query: 459 DYGEFIAATVHLNKLEREEH 478
D EF A + L E+
Sbjct: 61 DRDEFAVA-MFLVYCALEKE 79
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.5 bits (123), Expect = 5e-09
Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 470 LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRID 529
+ ++ ++ A F +G+++ D+++ + +L + D D+DG +D
Sbjct: 4 VKPEDKAKYD-AIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLD 61
Query: 530 YGEFVAMM 537
EF M
Sbjct: 62 RDEFAVAM 69
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.4 bits (133), Expect = 2e-10
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGT 457
+++E+ FK + D +G I K + S L E+ + + +D D G
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--SKLPILELSHIWELSDFDKDGA 59
Query: 458 IDYGEFIAATVHLNKLEREEH 478
+ EF AA HL + +
Sbjct: 60 LTLDEFCAA-FHLVVARKNGY 79
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.0 bits (132), Expect = 3e-10
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 470 LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRID 529
+ +R+ V F+ D +G+I ++ + + + L I D D DG +
Sbjct: 3 ITDEQRQY-YVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALT 61
Query: 530 YGEFVAMM 537
EF A
Sbjct: 62 LDEFCAAF 69
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 58.1 bits (139), Expect = 2e-10
Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 6/142 (4%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNS 455
A +++ + L E F+A+DTD SGAI+ EL A L G L+ D ++S
Sbjct: 11 ARHMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHS 68
Query: 456 GTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLED 515
G I + EF + + + DG + + +++ +
Sbjct: 69 GEITFDEFKDLHHFILSMREGFR----KRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQA 124
Query: 516 IIREVDQDNDGRIDYGEFVAMM 537
++R+ D+ G + + ++V +
Sbjct: 125 LMRKFDRQRRGSLGFDDYVELS 146
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 46.6 bits (109), Expect = 1e-06
Identities = 9/66 (13%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 432 RRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGS 491
G + + + LM D G++ + +++ ++ + ++ F ++D++ +
Sbjct: 111 LSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRN------VFAFYDRERT 164
Query: 492 GYITVD 497
G +T
Sbjct: 165 GQVTFT 170
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.4 bits (125), Expect = 4e-09
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 470 LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRID 529
+ + +RE V F+ D S +I+ + + ++ L I D D DG +
Sbjct: 16 ITEEQREY-YVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALT 74
Query: 530 YGEFVAMM 537
EF A
Sbjct: 75 LPEFCAAF 82
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.5 bits (115), Expect = 9e-08
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTI 458
++EE+ F+++ D S I+ K + S L E+ + + +D D G +
Sbjct: 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGAL 73
Query: 459 DYGEFIAATVHLNKLERE 476
EF AA HL +
Sbjct: 74 TLPEFCAA-FHLIVARKN 90
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 50.7 bits (121), Expect = 9e-09
Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 11/77 (14%)
Query: 474 EREEHLVAAFQYFDK--DGSGYITVDELQQA---------CAEHNMTDVLLEDIIREVDQ 522
+ E ++ F K I L A L D+ + D+
Sbjct: 4 QAERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDK 63
Query: 523 DNDGRIDYGEFVAMMQK 539
+ D +ID+ EF++++
Sbjct: 64 NEDKKIDFSEFLSLLGD 80
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 47.3 bits (112), Expect = 2e-07
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 8/76 (10%)
Query: 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDT-------EIRDLMD 448
+ + +E I G+ +MF I L ++ + D+ +
Sbjct: 1 SNTQAERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFE 59
Query: 449 AADVDNSGTIDYGEFI 464
D + ID+ EF+
Sbjct: 60 KKDKNEDKKIDFSEFL 75
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 43.0 bits (102), Expect = 1e-06
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 476 EEHLVAAFQYFDKDGSGYITVDELQQA 502
EE + AF+ FDKDG+GYI+ EL+
Sbjct: 2 EEEIREAFRVFDKDGNGYISAAELRHV 28
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 37.2 bits (87), Expect = 1e-04
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG 435
SEEEI +E F+ D D +G I+ EL+ + G
Sbjct: 1 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLG 33
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 39.7 bits (93), Expect = 5e-05
Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQACAEHNMTDVL--------LEDIIREV 520
+LE+ L+ F Y ++G + EL++ + ++ L ++ ++ +
Sbjct: 3 ELEKAVVALIDVFHQYSGREGDKHKLKKSELKEL-INNELSHFLEEIKEQEVVDKVMETL 61
Query: 521 DQDNDGRIDYGEFVAMMQK 539
D D DG D+ EF+A +
Sbjct: 62 DSDGDGECDFQEFMAFVAM 80
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 34.7 bits (80), Expect = 0.003
Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 401 EEEIAGLKEMFK--AMDTDNSGAITFDELKAGLRR-YGSTLKDTE----IRDLMDAADVD 453
E+ + L ++F + + + ELK + L++ + + +M+ D D
Sbjct: 5 EKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD 64
Query: 454 NSGTIDYGEFI 464
G D+ EF+
Sbjct: 65 GDGECDFQEFM 75
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Score = 39.7 bits (93), Expect = 6e-05
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 472 KLERE-EHLVAAFQ-YFDKDGSGY-ITVDELQQACAEHNMTDVL--------LEDIIREV 520
+ ER E L+A FQ + +DG+ I+ E + L+ +++++
Sbjct: 3 ETERCIESLIAIFQKHAGRDGNNTKISKTEFLIF-MNTELAAFTQNQKDPGVLDRMMKKL 61
Query: 521 DQDNDGRIDYGEFVAMMQK 539
D D+DG++D+ EF+ ++
Sbjct: 62 DLDSDGQLDFQEFLNLIGG 80
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Score = 38.6 bits (90), Expect = 2e-04
Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 472 KLERE-EHLVAAFQ-YFDKDG-SGYITVDELQQACAEHNMTDVL--------LEDIIREV 520
+LE ++ F Y +G + +T EL+ E + L ++ +++++
Sbjct: 3 ELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVL-MEKELPGFLQSGKDKDAVDKLLKDL 61
Query: 521 DQDNDGRIDYGEFVAMMQK 539
D + D ++D+ EF+ +
Sbjct: 62 DANGDAQVDFSEFIVFVAA 80
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Length = 392 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Score = 40.2 bits (93), Expect = 6e-04
Identities = 15/139 (10%), Positives = 39/139 (28%), Gaps = 4/139 (2%)
Query: 105 RKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE----DVEDVRREIQIMHHLAGHK 160
+++G G + + K + E ++ R E + H
Sbjct: 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV 91
Query: 161 NIVTIKGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG 220
+ + Y D+ VME + ++ + + G + + + +
Sbjct: 92 PHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYA 151
Query: 221 VMHRDLKPENFLLVNKDDD 239
+ + K N +
Sbjct: 152 LEPKVKKQLVKQFTNPELC 170
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Score = 36.2 bits (84), Expect = 0.001
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
Query: 472 KLERE-EHLVAAF-QYFDKDG-SGYITVDELQQACAEHNMTDVL---------LEDIIRE 519
+LER E ++ F QY K G + E ++ ++ + L +E I+ +
Sbjct: 4 QLERNIETIINTFHQYSVKLGHPDTLNQGEFKEL-VRKDLQNFLKKENKNEKVIEHIMED 62
Query: 520 VDQDNDGRIDYGEFVAMMQK 539
+D + D ++ + EF+ +M +
Sbjct: 63 LDTNADKQLSFEEFIMLMAR 82
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 564 | |||
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.93 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.88 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.88 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.87 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.86 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.86 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.85 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.85 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.85 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.85 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.84 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.84 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.84 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.84 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.84 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.83 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.83 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.83 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.82 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.81 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.81 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.79 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.79 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.77 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.77 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.77 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.76 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.75 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.74 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.74 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 99.72 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 99.72 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 99.71 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.69 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 99.69 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 99.66 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 99.66 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.66 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.64 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.55 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.55 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.52 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.5 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.5 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.49 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.45 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.44 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.43 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.43 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.41 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.41 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.41 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.4 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.4 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.4 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.39 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.37 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.37 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.37 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.37 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.36 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.36 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.36 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.36 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.35 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.35 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.34 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.34 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.33 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.33 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 99.33 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.32 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.32 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.32 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.32 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.31 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.3 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.3 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.3 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.3 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.3 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.29 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.29 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.29 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.28 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.27 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.26 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.25 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.25 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.25 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.24 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.23 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 99.22 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.21 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 99.21 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.21 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.19 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.19 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.19 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 99.17 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.17 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.15 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 99.15 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.08 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.08 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.08 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 99.04 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.04 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.04 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.03 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.0 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 98.98 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 98.98 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 98.97 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 98.97 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 98.96 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 98.96 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 98.94 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.93 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.89 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.88 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.87 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.86 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.86 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.86 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.86 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.85 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.85 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.84 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.84 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.82 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.81 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.8 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.78 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.77 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.77 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.75 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.71 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.68 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.66 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.65 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.64 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.62 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.62 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.59 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.57 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.55 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.5 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.4 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.31 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.18 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.15 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.1 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.08 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.06 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.05 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.01 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.91 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 97.89 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.88 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 97.88 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 97.81 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 97.65 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.16 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.16 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.96 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 96.84 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 95.89 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 95.1 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 94.01 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 93.4 | |
| d1h8ba_ | 73 | alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | 93.34 | |
| d1wlma1 | 138 | Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090 | 88.91 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 88.59 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 85.39 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 85.21 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 84.25 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 81.83 | |
| d1pula1 | 103 | Hypothetical protein c32e8.3 {Caenorhabditis elega | 81.42 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.2e-63 Score=489.55 Aligned_cols=286 Identities=40% Similarity=0.725 Sum_probs=234.8
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL 173 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 173 (564)
.+.+.+.|++.+.||+|+||+||+|+++.+++.||||++.+.... .....+.+|+.+|++++ |||||++++++.++.
T Consensus 4 ~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~ 80 (307)
T d1a06a_ 4 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE--GKEGSMENEIAVLHKIK-HPNIVALDDIYESGG 80 (307)
T ss_dssp CSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCC-CTTBCCEEEEEECSS
T ss_pred CCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh--hHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECC
Confidence 456788899999999999999999999999999999999765432 23456789999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 174 CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.+|||||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...++++.+||+|||+|+..
T Consensus 81 ~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~ 160 (307)
T d1a06a_ 81 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160 (307)
T ss_dssp EEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred EEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence 99999999999999999998889999999999999999999999999999999999999976667789999999999987
Q ss_pred CCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
.........+||+.|+|||++.+ .|+.++|||||||++|+|++|++||.+....++...+.++...++.+.++.+|+++
T Consensus 161 ~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 240 (307)
T d1a06a_ 161 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 240 (307)
T ss_dssp ------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHH
T ss_pred cCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHH
Confidence 76666677899999999999985 59999999999999999999999999999999999999998888877778899999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCCCCCHHHHHHHHhhhh
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSA 383 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~~~~~~~~~~~k~~~~ 383 (564)
++||.+||.+||++|||++|+|+||||++... ....+...+..++++..+
T Consensus 241 ~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~-~~~~~~~~~~~~~~~~~~ 290 (307)
T d1a06a_ 241 KDFIRHLMEKDPEKRFTCEQALQHPWIAGDTA-LDKNIHQSVSEQIKKNFA 290 (307)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHHSTTTTSSCC-CCCCCHHHHHHHHHHHSC
T ss_pred HHHHHHHccCCHhHCcCHHHHhcCHhhCCCCc-cccccchhHHHHHHHHHH
Confidence 99999999999999999999999999986432 233444555555554433
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-62 Score=470.24 Aligned_cols=254 Identities=33% Similarity=0.592 Sum_probs=231.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.++++++ |||||++++++.++..+|||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcC-CCCCCeEEEEEEECCEEEEE
Confidence 45999999999999999999999999999999997654333344667889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|...... .
T Consensus 85 mEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~~kl~DFG~a~~~~~~-~ 160 (263)
T d2j4za1 85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSS-R 160 (263)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCSCSCCCCC-C
T ss_pred EeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee---cCCCCEeecccceeeecCCC-c
Confidence 9999999999999988899999999999999999999999999999999999999 77789999999999876543 3
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
....+||+.|+|||++.+ .|+.++|||||||++|+|++|+.||.+.+..+++..+.++...++ ..+|+++++||.
T Consensus 161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 236 (263)
T d2j4za1 161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 236 (263)
T ss_dssp CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHHH
T ss_pred ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHHH
Confidence 456789999999999986 489999999999999999999999999999999999988776554 358999999999
Q ss_pred HhcccCCCCCCCHHHHhcCCCcCC
Q 008475 338 KMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 338 ~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
+||+.||++|||++|+|+||||..
T Consensus 237 ~~L~~dp~~R~t~~eil~hp~~~~ 260 (263)
T d2j4za1 237 RLLKHNPSQRPMLREVLEHPWITA 260 (263)
T ss_dssp HHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred HHccCCHhHCcCHHHHHcCcCcCC
Confidence 999999999999999999999975
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-61 Score=467.01 Aligned_cols=258 Identities=29% Similarity=0.534 Sum_probs=219.7
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.++|++.+.||+|+||+||+|+++.+|+.||||++..... ....+.+.+|+.+|++++ |||||++++++.++..+|
T Consensus 3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l~-HpnIv~~~~~~~~~~~~~ 79 (271)
T d1nvra_ 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQY 79 (271)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCC-CTTBCCEEEEEEETTEEE
T ss_pred CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHhCC-CCCEeeEeeeeccCceeE
Confidence 34679999999999999999999999999999999976542 334467889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.....
T Consensus 80 ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl---~~~~~~KL~DFG~a~~~~~~ 156 (271)
T d1nvra_ 80 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYN 156 (271)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECEET
T ss_pred EEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEE---CCCCCEEEccchhheeeccC
Confidence 999999999999999888889999999999999999999999999999999999999 77789999999999876433
Q ss_pred ---CceecccCCCcccchhhhhh-cC-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCccCCCCCCCCCCH
Q 008475 257 ---QIFTDVVGSPYYVAPEVLLK-HY-GPEADVWTAGVILYILLSGVPPFWAETQQGI-FDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 257 ---~~~~~~~gt~~y~aPE~~~~-~~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~ 330 (564)
......+||+.|+|||++.+ .+ +.++|||||||++|||++|++||........ +..+..... ...++..+|+
T Consensus 157 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~s~ 234 (271)
T d1nvra_ 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNPWKKIDS 234 (271)
T ss_dssp TEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT--TSTTGGGSCH
T ss_pred CccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC--CCCccccCCH
Confidence 23456789999999999985 34 6789999999999999999999977654332 333333222 2233467899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
++.+||.+||+.||++|||++|+|+||||++.
T Consensus 235 ~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 235 APLALLHKILVENPSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence 99999999999999999999999999999863
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-60 Score=469.26 Aligned_cols=268 Identities=39% Similarity=0.689 Sum_probs=241.5
Q ss_pred ccccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC---HHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 94 TDNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS---REDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 94 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
.+++.++|++++.||+|+||+||+|+++.+|+.||||++.+..... ....+.+.+|+.+|++++ |||||+++++|.
T Consensus 5 ~~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~ 83 (293)
T d1jksa_ 5 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYE 83 (293)
T ss_dssp CSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEE
T ss_pred CCCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCC-CCCCCcEEEEEE
Confidence 3457788999999999999999999999999999999997654322 224678899999999997 999999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC-CCCcEEEeeCCC
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD-DDFSLKAIDFGL 249 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~-~~~~~kl~DfG~ 249 (564)
+...+|||||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+...+ ....+||+|||+
T Consensus 84 ~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~ 163 (293)
T d1jksa_ 84 NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163 (293)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred ECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhh
Confidence 9999999999999999999999888999999999999999999999999999999999999994322 223699999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
|.............||+.|+|||++.+ .|+.++||||+||++|||++|+.||.+.+..+.+..+.++...++...++.+
T Consensus 164 a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (293)
T d1jksa_ 164 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243 (293)
T ss_dssp CEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTS
T ss_pred hhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCC
Confidence 998877666777889999999999985 5999999999999999999999999999999999999998877766556678
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
|+++++||.+||..||++|||++|+|+||||+..
T Consensus 244 s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 277 (293)
T d1jksa_ 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277 (293)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 9999999999999999999999999999999864
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=8e-60 Score=475.50 Aligned_cols=264 Identities=33% Similarity=0.592 Sum_probs=240.9
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
.+.+.|++++.||+|+||.||+|++..+|+.||||++.+. .....+.+.+|+.+|++|+ |||||+++++|.++..+
T Consensus 26 ~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~ 101 (352)
T d1koba_ 26 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP---YPLDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEM 101 (352)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSEE
T ss_pred CcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCc---chhHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEE
Confidence 3456799999999999999999999999999999999754 2344567889999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|||||||+||+|.+.+...+ ++++..++.|+.||+.||.|||++||+||||||+|||+.. ...+.+||+|||+|....
T Consensus 102 ~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~-~~~~~vkL~DFGla~~~~ 180 (352)
T d1koba_ 102 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLN 180 (352)
T ss_dssp EEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEECC
T ss_pred EEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc-cCCCeEEEeecccceecC
Confidence 99999999999998876544 6999999999999999999999999999999999999942 256789999999999988
Q ss_pred CCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.........||+.|+|||++.+ .|+.++|||||||++|+|+||++||.+.+..+++..+.++...++...+..+|++++
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 260 (352)
T d1koba_ 181 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 260 (352)
T ss_dssp TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHH
T ss_pred CCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 7777778899999999999985 499999999999999999999999999999999999999988888877888999999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
+||.+||++||.+|||++|+|+||||+....
T Consensus 261 ~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~ 291 (352)
T d1koba_ 261 DFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 291 (352)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence 9999999999999999999999999987543
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-60 Score=468.85 Aligned_cols=257 Identities=33% Similarity=0.563 Sum_probs=230.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|++++++++ ||||+++++++.++..+|||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-STTBCCEEEEEECSSEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcC-CCCeeEEEEEEEECCEEEEE
Confidence 56999999999999999999999999999999997654333445678999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC--
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-- 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-- 256 (564)
||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ ++++.+||+|||+|+.....
T Consensus 87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll---~~~~~vkl~DFG~a~~~~~~~~ 163 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK 163 (288)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECC----
T ss_pred EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc---CCCceEEecccccceecccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 77889999999999876532
Q ss_pred -CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 -QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
......+||+.|+|||++.+ .|+.++|||||||++|+|++|+.||.+.+..+++..+.++.+.++ ..+|+++++
T Consensus 164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 239 (288)
T d1uu3a_ 164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 239 (288)
T ss_dssp ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC----TTCCHHHHH
T ss_pred ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCC----ccCCHHHHH
Confidence 23456789999999999985 599999999999999999999999999999999999998876654 358999999
Q ss_pred HHHHhcccCCCCCCCHHH------HhcCCCcCCCC
Q 008475 335 LIRKMLCSQPSERLTAHE------VLCHPWICENG 363 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~------vl~hp~~~~~~ 363 (564)
||.+||+.||++|||++| +++||||++..
T Consensus 240 li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~ 274 (288)
T d1uu3a_ 240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 274 (288)
T ss_dssp HHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred HHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCC
Confidence 999999999999999987 68899998754
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1e-59 Score=459.42 Aligned_cols=263 Identities=38% Similarity=0.682 Sum_probs=241.1
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC------HHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS------REDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
|.++|++.+.||+|+||+||+|++..+|+.||||++.+..... ....+.+.+|+.+++++..||||+++++++.
T Consensus 1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 80 (277)
T d1phka_ 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 80 (277)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence 4578999999999999999999999999999999997654322 2234568899999999987999999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
+++.+|||||||+||+|.+++..++++++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 81 ~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a 157 (277)
T d1phka_ 81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFS 157 (277)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTC
T ss_pred cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE---cCCCCeEEccchhe
Confidence 999999999999999999999999999999999999999999999999999999999999999 78889999999999
Q ss_pred cccCCCCceecccCCCcccchhhhhh-------cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLLK-------HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD 323 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 323 (564)
............+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+..+...++.+
T Consensus 158 ~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~ 237 (277)
T d1phka_ 158 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP 237 (277)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred eEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCc
Confidence 98877666677899999999999863 36889999999999999999999999999999999999998887777
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 324 PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 324 ~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
.+..+|+++++||.+||+.||++|||++|||+||||++.
T Consensus 238 ~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~ 276 (277)
T d1phka_ 238 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 276 (277)
T ss_dssp TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred ccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence 777899999999999999999999999999999999864
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=6.7e-60 Score=475.71 Aligned_cols=265 Identities=35% Similarity=0.596 Sum_probs=240.9
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+.+-++|++++.||+|+||.||+|+++.+|+.||||++.+. .....+.+.+|+.+|++++ |||||++++++.+++.
T Consensus 22 ~~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~---~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~ 97 (350)
T d1koaa2 22 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNE 97 (350)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCC---SHHHHHHHHHHHHHHHHTC-CTTBCCEEEEEEETTE
T ss_pred CCCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEccc---chhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCE
Confidence 34556799999999999999999999999999999999654 3455678899999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
+|||||||+||+|.+++.. .+++++..++.|+.||+.||.|||++|||||||||+|||+.. +.++.+||+|||+|+..
T Consensus 98 ~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~-~~~~~vkL~DFG~a~~~ 176 (350)
T d1koaa2 98 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTAHL 176 (350)
T ss_dssp EEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTSCCEEECCCTTCEEC
T ss_pred EEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc-CCCCeEEEeecchheec
Confidence 9999999999999999854 467999999999999999999999999999999999999953 23578999999999988
Q ss_pred CCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 254 KPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 254 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
..........||+.|+|||++.+ .|+.++|||||||++|+|++|+.||.+.+..+++..+..+...++...++.+|+++
T Consensus 177 ~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 256 (350)
T d1koaa2 177 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG 256 (350)
T ss_dssp CTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHH
T ss_pred ccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence 77777778899999999999985 58999999999999999999999999999999999999988877776667899999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
++||.+||+.||++|||++|+|+||||+....
T Consensus 257 ~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~ 288 (350)
T d1koaa2 257 KDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 288 (350)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTC
T ss_pred HHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence 99999999999999999999999999987643
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-60 Score=462.84 Aligned_cols=256 Identities=30% Similarity=0.465 Sum_probs=225.7
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.++|++.+.||+|+||+||+|++..+|+.||||++...... ..+.+.+|+.++++++ |||||+++++|.+...+|
T Consensus 18 p~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~ 93 (293)
T d1yhwa1 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENK-NPNIVNYLDSYLVGDELW 93 (293)
T ss_dssp TTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred cccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh---HHHHHHHHHHHHHhCC-CCCEeeEeEEEEECCEEE
Confidence 456799999999999999999999999999999999765432 3467889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||||+||+|.+++.+ +.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.....
T Consensus 94 ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~vkl~DFG~a~~~~~~ 169 (293)
T d1yhwa1 94 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPE 169 (293)
T ss_dssp EEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCST
T ss_pred EEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEE---CCCCcEeeccchhheeeccc
Confidence 99999999999987654 579999999999999999999999999999999999999 67789999999999876543
Q ss_pred -CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 257 -QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 257 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
......+||+.|+|||++.+ .|+.++|||||||++|+|++|+.||.+.+..+.+..+...... ....+..+|+++++
T Consensus 170 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~ 248 (293)
T d1yhwa1 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFRD 248 (293)
T ss_dssp TCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-CCSSGGGSCHHHHH
T ss_pred cccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC-CCCCcccCCHHHHH
Confidence 34556789999999999985 5999999999999999999999999998887777666554322 12233568999999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
||.+||++||++|||++|+|+||||+.
T Consensus 249 li~~~L~~dP~~R~s~~eil~Hp~~~~ 275 (293)
T d1yhwa1 249 FLNRCLDMDVEKRGSAKELLQHQFLKI 275 (293)
T ss_dssp HHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred HHHHHccCChhHCcCHHHHhcCHhhCC
Confidence 999999999999999999999999975
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-59 Score=469.51 Aligned_cols=256 Identities=32% Similarity=0.534 Sum_probs=234.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+++. ||||++++++|++...+|+|
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCC-CCCEEEEEeeeccccccccc
Confidence 45999999999999999999999999999999998654433445678899999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC-CC
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP-GQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~-~~ 257 (564)
||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+.... ..
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl---~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe---cCCCCEEEeecccccccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 7889999999999987543 34
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
.....+||+.|+|||++.+ .|+.++|||||||++|||++|++||.+.+..+++..+..+.+.++ ..+|+++++||
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli 236 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLL 236 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHHH
Confidence 5567899999999999985 599999999999999999999999999999999999998876654 45899999999
Q ss_pred HHhcccCCCCCCC-----HHHHhcCCCcCCC
Q 008475 337 RKMLCSQPSERLT-----AHEVLCHPWICEN 362 (564)
Q Consensus 337 ~~~l~~dp~~R~s-----~~~vl~hp~~~~~ 362 (564)
.+||++||.+||+ ++++++||||++.
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i 267 (337)
T d1o6la_ 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HhhccCCchhhcccccccHHHHHcCcccccC
Confidence 9999999999994 8999999999864
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-59 Score=465.40 Aligned_cols=257 Identities=25% Similarity=0.420 Sum_probs=231.0
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.+.|++.+.||+|+||+||+|++..+|+.||||++...........+.+.+|+.+|++++ |||||++++++.++..+|
T Consensus 13 p~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~ 91 (309)
T d1u5ra_ 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAW 91 (309)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEE
T ss_pred cHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEECCEEE
Confidence 4456999999999999999999999999999999998766655666788999999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||||.+|+|..++...+++++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|.....
T Consensus 92 iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~~Kl~DFG~a~~~~~- 167 (309)
T d1u5ra_ 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP- 167 (309)
T ss_dssp EEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSSSS-
T ss_pred EEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE---CCCCCEEEeecccccccCC-
Confidence 999999999998777778889999999999999999999999999999999999999 6778999999999987543
Q ss_pred CceecccCCCcccchhhhhh----cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHH
Q 008475 257 QIFTDVVGSPYYVAPEVLLK----HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSA 332 (564)
Q Consensus 257 ~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 332 (564)
....+||+.|+|||++.+ .|+.++|||||||++|||++|..||.+.+..+.+..+..+..... ....+|+++
T Consensus 168 --~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~s~~~ 243 (309)
T d1u5ra_ 168 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGHWSEYF 243 (309)
T ss_dssp --BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--SCTTSCHHH
T ss_pred --CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC--CCCCCCHHH
Confidence 345789999999999863 489999999999999999999999999988888888777654433 234689999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 333 KDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 333 ~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
++||.+||+.||.+|||++|+|+||||...
T Consensus 244 ~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~ 273 (309)
T d1u5ra_ 244 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (309)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred HHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence 999999999999999999999999999763
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-59 Score=452.74 Aligned_cols=253 Identities=23% Similarity=0.381 Sum_probs=221.5
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec----CCeEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----SLCVH 176 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----~~~~~ 176 (564)
|++.++||+|+||+||+|.+..+++.||+|++..... .....+.+.+|+++|++++ |||||+++++|.+ ...+|
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~~~ 88 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIV 88 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEeeccccCCEEE
Confidence 4677889999999999999999999999999976544 4556778999999999997 9999999999875 45689
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLG--VMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
||||||++|+|.+++.+.+.+++..++.++.||+.||+|||+++ |+||||||+|||+. ++++.+||+|||+|+...
T Consensus 89 ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~--~~~~~~Kl~DFGla~~~~ 166 (270)
T d1t4ha_ 89 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKR 166 (270)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGGGCC
T ss_pred EEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee--CCCCCEEEeecCcceecc
Confidence 99999999999999998889999999999999999999999999 99999999999993 246789999999998654
Q ss_pred CCCceecccCCCcccchhhhhhcCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 255 PGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 255 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
. ......+||+.|+|||++.+.|+.++|||||||++|||++|+.||.+.. ...+...+..+..... ....++++++
T Consensus 167 ~-~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~ 243 (270)
T d1t4ha_ 167 A-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS--FDKVAIPEVK 243 (270)
T ss_dssp T-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGG--GGGCCCHHHH
T ss_pred C-CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcc--cCccCCHHHH
Confidence 3 3445688999999999999889999999999999999999999997654 5556666665543222 2245789999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCCCcC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCHPWIC 360 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~hp~~~ 360 (564)
+||.+||.+||++|||++|+|+||||+
T Consensus 244 ~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 244 EIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 999999999999999999999999995
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-59 Score=460.60 Aligned_cols=257 Identities=28% Similarity=0.441 Sum_probs=227.2
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|++.+.||+|+||+||+|++..+++.||||++.+. .....+.+.+|+++|++++ |||||++++++.+.+.+|
T Consensus 10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~---~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~ 85 (288)
T d2jfla1 10 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLW 85 (288)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---SSGGGGGTHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred cccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCeEE
Confidence 446799999999999999999999999999999999754 2344567889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||||+||+|.+++.+ .+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|.....
T Consensus 86 lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll---~~~~~~Kl~DFG~a~~~~~ 162 (288)
T d2jfla1 86 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTR 162 (288)
T ss_dssp EEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECHH
T ss_pred EEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeE---CCCCCEEEEechhhhccCC
Confidence 99999999999998765 4569999999999999999999999999999999999999 7788999999999976532
Q ss_pred C-CceecccCCCcccchhhhh------hcCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 256 G-QIFTDVVGSPYYVAPEVLL------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 256 ~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
. ......+||+.|+|||++. +.|+.++|||||||++|||++|++||.+.+..+++..+.++..... .....+
T Consensus 163 ~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~ 241 (288)
T d2jfla1 163 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL-AQPSRW 241 (288)
T ss_dssp HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC-SSGGGS
T ss_pred CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CccccC
Confidence 2 2334578999999999984 2488999999999999999999999999999888888887754332 223468
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
|+++++||.+||+.||++|||++|+|+||||+.
T Consensus 242 s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~ 274 (288)
T d2jfla1 242 SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 274 (288)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 999999999999999999999999999999975
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-59 Score=453.21 Aligned_cols=253 Identities=28% Similarity=0.483 Sum_probs=214.9
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CCeEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SLCVH 176 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~~ 176 (564)
+.|++.+.||+|+||+||+|+++.+|+.||+|++..... .....+.+.+|++++++++ |||||++++++.+ +..+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~ 81 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLY 81 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS-CHHHHHHHHHHHHHTTSCC-CTTBCCEEEEEEC----CEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC-CHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEeCCCCEEE
Confidence 569999999999999999999999999999999976654 4566778999999999997 9999999999864 56789
Q ss_pred EEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-----CEeecCCCCcEEeecCCCCCcEEEeeC
Q 008475 177 IVMELCAGGELFDRIIQ----RGHYSERKAAELTRIIVGVVEACHSLG-----VMHRDLKPENFLLVNKDDDFSLKAIDF 247 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-----iiH~Dlkp~NIll~~~~~~~~~kl~Df 247 (564)
||||||+||+|.+++.+ .+.+++..++.++.||+.||.|||++| |+||||||+|||+ +.++.+||+||
T Consensus 82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll---~~~~~vkl~DF 158 (269)
T d2java1 82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDF 158 (269)
T ss_dssp EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE---CTTSCEEECCH
T ss_pred EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc---CCCCcEEEeec
Confidence 99999999999998864 457999999999999999999999976 9999999999999 77889999999
Q ss_pred CCccccCCCC-ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCC
Q 008475 248 GLSVFFKPGQ-IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPW 325 (564)
Q Consensus 248 G~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 325 (564)
|+|+...... .....+||+.|+|||++.+ .|+.++|||||||++|||+||+.||.+.+..++...+..+.... ..
T Consensus 159 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~---~~ 235 (269)
T d2java1 159 GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IP 235 (269)
T ss_dssp HHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---CC
T ss_pred cceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC---CC
Confidence 9998765433 3456789999999999975 59999999999999999999999999999999999988876542 22
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 326 PLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 326 ~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
..+|+++.+||.+||+.||.+|||++|+|+|||+
T Consensus 236 ~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 236 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred cccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 4689999999999999999999999999999996
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-59 Score=463.94 Aligned_cols=261 Identities=29% Similarity=0.558 Sum_probs=238.1
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.++|++.+.||+|+||+||+|.++.+++.||||++.... .....+.+|+++|+.++ |||||+++++|+++..+|
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~ 77 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIAR-HRNILHLHESFESMEELV 77 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEEE
T ss_pred CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----ccHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEE
Confidence 5678999999999999999999999999999999997542 23456889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||||+||+|.+++...+ ++++.+++.|+.||+.||.|||++||+||||||+|||+.. ++...+||+|||++.....
T Consensus 78 lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~-~~~~~ikl~DFG~~~~~~~ 156 (321)
T d1tkia_ 78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp EEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCTTCEECCT
T ss_pred EEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC-CCceEEEEcccchhhcccc
Confidence 9999999999999997665 7999999999999999999999999999999999999943 2456899999999998877
Q ss_pred CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKD 334 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 334 (564)
........+|+.|+|||.+.+ .|+.++||||+||++|+|++|..||.+.+..+++..|.++...++...++.+|+++++
T Consensus 157 ~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T d1tkia_ 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred CCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHH
Confidence 776777889999999999885 5999999999999999999999999999999999999998888777666789999999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 335 LIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 335 li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
||.+||.+||++|||++|+|+||||++..
T Consensus 237 li~~~L~~dp~~R~s~~eil~hp~~~~~~ 265 (321)
T d1tkia_ 237 FVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHHccCChhHCcCHHHHhcCHhhccCc
Confidence 99999999999999999999999998653
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.8e-58 Score=459.29 Aligned_cols=255 Identities=28% Similarity=0.547 Sum_probs=232.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.++++++ |||||++++++.+...+|+|
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhcc-CcChhheeeeEeeCCeeeeE
Confidence 34999999999999999999999999999999997654333345678899999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
||||+||+|..++.....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.....
T Consensus 83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl---~~~g~vkL~DFG~a~~~~~~-- 157 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDV-- 157 (316)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSC--
T ss_pred eeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE---cCCCCEEEecCccceEeccc--
Confidence 9999999999999999999999999999999999999999999999999999999 77889999999999876533
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
....+||+.|+|||++.+ .|+.++|||||||++|+|++|+.||.+.+..+++..+.++...++ +.+|++++++|.
T Consensus 158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 233 (316)
T d1fota_ 158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLS 233 (316)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHH
T ss_pred cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence 356789999999999986 499999999999999999999999999999999999988876554 458999999999
Q ss_pred HhcccCCCCCC-----CHHHHhcCCCcCCCC
Q 008475 338 KMLCSQPSERL-----TAHEVLCHPWICENG 363 (564)
Q Consensus 338 ~~l~~dp~~R~-----s~~~vl~hp~~~~~~ 363 (564)
+||.+||.+|+ |++++|+||||++..
T Consensus 234 ~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~ 264 (316)
T d1fota_ 234 RLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 264 (316)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred HHhhhCHHhccccchhhHHHHHcCcccccCC
Confidence 99999999996 999999999998743
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-58 Score=463.12 Aligned_cols=256 Identities=24% Similarity=0.364 Sum_probs=217.6
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..++|++.+.||+|+||+||+|++..+|+.||+|++.... .....+.+.+|+.+|++++ |||||+++++|.+...+|
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 80 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEIS 80 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGCC-CTTBCCEEEEEECSSEEE
T ss_pred CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 3567999999999999999999999999999999997543 3444578899999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||||+||+|.+++.+.+.+++..++.++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||+|.....
T Consensus 81 iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~ 157 (322)
T d1s9ja_ 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID 157 (322)
T ss_dssp EEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHHHH
T ss_pred EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE---CCCCCEEEeeCCCccccCC
Confidence 999999999999999988899999999999999999999997 599999999999999 7788999999999987543
Q ss_pred CCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----------------------
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFD----------------------- 311 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~----------------------- 311 (564)
. ...+.+||+.|+|||++.+ .|+.++||||+||++|||++|+.||.+.+......
T Consensus 158 ~-~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (322)
T d1s9ja_ 158 S-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236 (322)
T ss_dssp H-TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------
T ss_pred C-ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccc
Confidence 2 2356799999999999985 69999999999999999999999997755322110
Q ss_pred -------------------HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 312 -------------------AVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 312 -------------------~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
.+.... .+..+...+|.++++||.+||+.||.+|||++|+|+||||++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~ 303 (322)
T d1s9ja_ 237 LSSYGMDSRPPMAIFELLDYIVNEP--PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303 (322)
T ss_dssp ---------CCCCHHHHHHHHHTSC--CCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred ccccccccccchhHHHHHhhhhccC--CccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence 000000 011111246899999999999999999999999999999975
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.6e-58 Score=461.97 Aligned_cols=254 Identities=30% Similarity=0.565 Sum_probs=231.7
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++++.||+|+||.||+|+++.+|+.||||++.+.........+.+.+|+.+|+.+. |||||++++++.+...+++|
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcC-CCcEeecccccccccccccc
Confidence 56999999999999999999999999999999997654333345677899999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI 258 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~ 258 (564)
|||+.||+|..++...+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 120 ~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl---~~~g~ikL~DFG~a~~~~~~-- 194 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC--
T ss_pred cccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc---CCCCCEEeeeceeeeecccc--
Confidence 9999999999999998999999999999999999999999999999999999999 77889999999999886543
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIR 337 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 337 (564)
....+||+.|+|||++.+ .|+.++|||||||++|+|+||+.||.+.+...++..+..+...++ ..+|+++.+||.
T Consensus 195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 270 (350)
T d1rdqe_ 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLR 270 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHHHH
T ss_pred cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHHHH
Confidence 345789999999999986 499999999999999999999999999999999999988876544 458999999999
Q ss_pred HhcccCCCCCC-----CHHHHhcCCCcCCC
Q 008475 338 KMLCSQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 338 ~~l~~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
+||.+||.+|+ |++++++||||+..
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHhhhCHHhccccccccHHHHHcCccccCC
Confidence 99999999995 99999999999864
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-58 Score=456.92 Aligned_cols=257 Identities=29% Similarity=0.467 Sum_probs=229.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+..|+.++.+..+|||||++++++.++..+|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 46999999999999999999999999999999997644323344566778888776433499999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-C
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-Q 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~ 257 (564)
||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++..... .
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~---~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee---cCCCceeccccchhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999 78889999999999865433 3
Q ss_pred ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 258 IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
.....+||+.|+|||++.+ .|+.++|||||||++|+|++|+.||.+.+..+++..+..+.+.++ ..+|+++++||
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli 234 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLL 234 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHH
Confidence 4455789999999999985 599999999999999999999999999999999999988766544 45899999999
Q ss_pred HHhcccCCCCCCCHH-HHhcCCCcCCC
Q 008475 337 RKMLCSQPSERLTAH-EVLCHPWICEN 362 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~-~vl~hp~~~~~ 362 (564)
.+||.+||.+|||+. ++++||||++.
T Consensus 235 ~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 235 VKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp HHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHhcccCCCCCcCHHHHHHhCchhccC
Confidence 999999999999995 89999999874
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-58 Score=461.22 Aligned_cols=267 Identities=36% Similarity=0.619 Sum_probs=226.0
Q ss_pred ccccccceeecc-cccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-
Q 008475 94 TDNIRDLYTLGR-KLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED- 171 (564)
Q Consensus 94 ~~~~~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~- 171 (564)
.+.+-+.|.+.. .||+|+||+||+|++..+++.||||++.+. ..+.+|+.++.++.+|||||+++++|++
T Consensus 6 ~~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~ 77 (335)
T d2ozaa1 6 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENL 77 (335)
T ss_dssp CSCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred CCCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeec
Confidence 344556798865 699999999999999999999999999642 3567899998777669999999999975
Q ss_pred ---CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEee
Q 008475 172 ---SLCVHIVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAID 246 (564)
Q Consensus 172 ---~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~D 246 (564)
+..+|||||||+||+|.+++... .++++.+++.|+.||+.||.|||++||+||||||+|||+...+..+.+||+|
T Consensus 78 ~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~D 157 (335)
T d2ozaa1 78 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD 157 (335)
T ss_dssp ETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECC
T ss_pred ccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccc
Confidence 56799999999999999999764 3699999999999999999999999999999999999997655678899999
Q ss_pred CCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHcCCccCC
Q 008475 247 FGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDA----VLKGHIDFE 321 (564)
Q Consensus 247 fG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~----i~~~~~~~~ 321 (564)
||+|+...........+||+.|+|||++.+ .|+.++|||||||++|+|+||++||.+.+....... +..+...++
T Consensus 158 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~ 237 (335)
T d2ozaa1 158 FGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP 237 (335)
T ss_dssp CTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCC
T ss_pred cceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 999998777666777899999999999985 599999999999999999999999987665444333 334444555
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCCCCC
Q 008475 322 SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDR 368 (564)
Q Consensus 322 ~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~~~~ 368 (564)
.+.+..+|+++++||.+||++||++|||+.|+|+||||.+....+..
T Consensus 238 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~~ 284 (335)
T d2ozaa1 238 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 284 (335)
T ss_dssp TTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSCCC
T ss_pred CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCCCC
Confidence 44455689999999999999999999999999999999876554443
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=6.2e-57 Score=456.77 Aligned_cols=258 Identities=26% Similarity=0.393 Sum_probs=218.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHH---HHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR---EIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~---E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+.|++.+.||+|+||.||+|++..+|+.||||++.+...........+.+ |+.+++.+. |||||+++++|.+...+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~-hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCC-CCcEEEEEEEEEECCEE
Confidence 45999999999999999999999999999999997544322222233344 466666665 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|||||||+||+|.+++...+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+....
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl---~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE---cCCCcEEEeeeceeeecCC
Confidence 9999999999999999999999999999999999999999999999999999999999 7888999999999987654
Q ss_pred CCceecccCCCcccchhhhh-h-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLL-K-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
.. ....+||+.|+|||++. + .|+.++|||||||++|||+||+.||.+......... .+.........+..+|++++
T Consensus 160 ~~-~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~ 237 (364)
T d1omwa3 160 KK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTLTMAVELPDSFSPELR 237 (364)
T ss_dssp SC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHH-HHHSSSCCCCCCSSSCHHHH
T ss_pred Cc-ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcccCCCCCCCCCCHHHH
Confidence 43 45578999999999996 3 489999999999999999999999987654433322 22222233334456899999
Q ss_pred HHHHHhcccCCCCCCC-----HHHHhcCCCcCCC
Q 008475 334 DLIRKMLCSQPSERLT-----AHEVLCHPWICEN 362 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s-----~~~vl~hp~~~~~ 362 (564)
+||.+||++||.+||| ++++++||||++.
T Consensus 238 ~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i 271 (364)
T d1omwa3 238 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271 (364)
T ss_dssp HHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred HHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence 9999999999999999 7999999999874
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-56 Score=443.49 Aligned_cols=258 Identities=26% Similarity=0.344 Sum_probs=216.3
Q ss_pred ecccccccCCeEEEEEEEccCCcEEEEEEeccccCCC--HHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEe
Q 008475 103 LGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLIS--REDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVME 180 (564)
Q Consensus 103 ~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 180 (564)
.+++||+|+||+||+|+++.+|+.||||++....... ....+.+.+|+.++++++ |||||++++++.++..+|||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~~~~~~~~~ivmE 80 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSNISLVFD 80 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTCCEEEEE
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCC-CCCEeEEEeeeccCCceeehhh
Confidence 3578999999999999999999999999997543321 122356889999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC-Cce
Q 008475 181 LCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG-QIF 259 (564)
Q Consensus 181 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~-~~~ 259 (564)
||.++++..+......+++..++.+++||+.||+|||++||+||||||+|||+ +.++.+||+|||+|...... ...
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli---~~~~~~KL~DFG~a~~~~~~~~~~ 157 (299)
T d1ua2a_ 81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAY 157 (299)
T ss_dssp CCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCCCC
T ss_pred hhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe---cCCCccccccCccccccCCCcccc
Confidence 99888777666667789999999999999999999999999999999999999 78889999999999876443 344
Q ss_pred ecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC--------------
Q 008475 260 TDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD-------------- 323 (564)
Q Consensus 260 ~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~-------------- 323 (564)
...+||+.|+|||++.+ .|+.++|||||||++|||++|.+||.+.+..+.+..|.+........
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T d1ua2a_ 158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 237 (299)
T ss_dssp CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhh
Confidence 56789999999999873 48999999999999999999999999999888887776421111100
Q ss_pred ----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 324 ----------PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 324 ----------~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
..+.+++++++||.+||+.||++|||++|+|+||||++...
T Consensus 238 ~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~ 288 (299)
T d1ua2a_ 238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG 288 (299)
T ss_dssp CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred ccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCC
Confidence 01346899999999999999999999999999999987653
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-56 Score=432.38 Aligned_cols=253 Identities=30% Similarity=0.551 Sum_probs=217.1
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHH---hHHHHHHHHHHHHhhc-CCCCccEEEEEEecC
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISRE---DVEDVRREIQIMHHLA-GHKNIVTIKGAYEDS 172 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~E~~~l~~l~-~h~niv~~~~~~~~~ 172 (564)
+.++|++.+.||+|+||+||+|++..+|+.||||++.+....... ...++.+|+.+++++. +|||||++++++.+.
T Consensus 2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~ 81 (273)
T d1xwsa_ 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 81 (273)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence 456799999999999999999999999999999999765443221 1234668999999986 489999999999999
Q ss_pred CeEEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 173 LCVHIVMELCAG-GELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 173 ~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
+.+|+||||+.+ +++.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+. .+.+.+||+|||+|.
T Consensus 82 ~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~--~~~~~vkl~DFG~a~ 159 (273)
T d1xwsa_ 82 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSGA 159 (273)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTCE
T ss_pred CeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEe--cCCCeEEECccccce
Confidence 999999999976 57888888888999999999999999999999999999999999999994 244789999999998
Q ss_pred ccCCCCceecccCCCcccchhhhhhc--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 252 FFKPGQIFTDVVGSPYYVAPEVLLKH--YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 252 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
.... ...+..+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.. .+.++...++ ..+|
T Consensus 160 ~~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~~~~~~----~~~s 228 (273)
T d1xwsa_ 160 LLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR----QRVS 228 (273)
T ss_dssp ECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCCS----SCCC
T ss_pred eccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------HHhhcccCCC----CCCC
Confidence 7543 345668899999999999853 4678999999999999999999997532 3455554443 4589
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
+++++||.+||..||++|||++|+|+||||++.
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 261 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 999999999999999999999999999999764
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-55 Score=433.04 Aligned_cols=259 Identities=24% Similarity=0.385 Sum_probs=216.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
|.|+++++||+|+||+||+|++..+|+.||||++..... .....+.+.+|+++|+++. |||||+++++|.++..+|+|
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~-Hp~Iv~~~~~~~~~~~~~iv 79 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLV 79 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCC-CCcEEEeccccccccceeEE
Confidence 469999999999999999999999999999999965432 3344578889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 179 MELCAGGELFDRIIQ--RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
||||.+ .+...+.. .+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 80 ~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~---~~~~~~kl~DFG~a~~~~~~ 155 (298)
T d1gz8a_ 80 FEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVP 155 (298)
T ss_dssp EECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTHHHHHCCC
T ss_pred EeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee---cccCcceeccCCcceeccCC
Confidence 999965 44454433 4569999999999999999999999999999999999999 77889999999999876543
Q ss_pred -CceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCC----------
Q 008475 257 -QIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESD---------- 323 (564)
Q Consensus 257 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~---------- 323 (564)
.......||+.|+|||++.. .++.++||||+||++|+|++|+.||.+.+..+.+..+.+........
T Consensus 156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (298)
T d1gz8a_ 156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235 (298)
T ss_dssp SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccc
Confidence 34455689999999998874 36889999999999999999999999988877766654321111110
Q ss_pred ---------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 324 ---------------PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 324 ---------------~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
..+.+|+++++||.+||++||++|||++|+|+||||++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~ 290 (298)
T d1gz8a_ 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290 (298)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred cccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCC
Confidence 0134688999999999999999999999999999998754
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.4e-55 Score=430.14 Aligned_cols=260 Identities=24% Similarity=0.350 Sum_probs=222.3
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC--
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-- 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-- 173 (564)
.+.++|++.+.||+|+||+||+|++..+|+.||||++.+.........+.+.+|+++++.++ ||||+++++++....
T Consensus 4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~-hpniv~~~~~~~~~~~~ 82 (277)
T d1o6ya_ 4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETPA 82 (277)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEECSS
T ss_pred CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcC-CCCCCcccceeeeccCC
Confidence 35678999999999999999999999999999999998776666777788999999999997 999999999997643
Q ss_pred --eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcc
Q 008475 174 --CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSV 251 (564)
Q Consensus 174 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~ 251 (564)
.+|||||||+|++|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+ +.++.++|+|||.+.
T Consensus 83 ~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll---~~~~~~~l~d~~~~~ 159 (277)
T d1o6ya_ 83 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIAR 159 (277)
T ss_dssp SEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---ETTSCEEECCCTTCE
T ss_pred CceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCccccc---Cccccceeehhhhhh
Confidence 489999999999999999999999999999999999999999999999999999999999 677889999999987
Q ss_pred ccCCC----CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 252 FFKPG----QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 252 ~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
..... ......+||+.|+|||++.+ .|+.++|||||||++|+|+||++||.+.+..+....+.+.....+...++
T Consensus 160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
T d1o6ya_ 160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 239 (277)
T ss_dssp ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSS
T ss_pred hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhcc
Confidence 65332 23455789999999999985 59999999999999999999999999999988888888777666666667
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCc
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 359 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~ 359 (564)
.+|+++.+||.+||.+||.+||+..+.|.|+|.
T Consensus 240 ~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~ 272 (277)
T d1o6ya_ 240 GLSADLDAVVLKALAKNPENRYQTAAEMRADLV 272 (277)
T ss_dssp SCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence 899999999999999999999944444445554
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-54 Score=429.88 Aligned_cols=262 Identities=24% Similarity=0.348 Sum_probs=217.4
Q ss_pred ccceeecccccccCCeEEEEEEEccC-CcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc--CCCCccEEEEEEec---
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIAT-GIEFACKSISKRKLISREDVEDVRREIQIMHHLA--GHKNIVTIKGAYED--- 171 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~--- 171 (564)
.++|+++++||+|+||+||+|++..+ ++.||||++..... .......+.+|+.+|+.|. +||||++++++|..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBC-TTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhc-cchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 46799999999999999999999765 66799999975433 2222334667888887774 49999999999853
Q ss_pred --CCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 172 --SLCVHIVMELCAGGELFDRII-QRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 172 --~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
...++++||||.++.+..... ....+++..++.++.||+.||+|||++||+||||||+|||+ +..+.+||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi---~~~~~~kl~dfg 161 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFG 161 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECSCC
T ss_pred ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE---cCCCCeeecchh
Confidence 357899999998877654433 34569999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc-----C--
Q 008475 249 LSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID-----F-- 320 (564)
Q Consensus 249 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-----~-- 320 (564)
++............+||+.|+|||++.+ .|+.++||||+||++|||++|++||.+.+..+.+..+.+.... +
T Consensus 162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 241 (305)
T d1blxa_ 162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 241 (305)
T ss_dssp SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred hhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccc
Confidence 9987766666677899999999999975 5999999999999999999999999999988877776542110 0
Q ss_pred ----------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 321 ----------------ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 321 ----------------~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.......+++.+++||.+||++||++|||++|+|+||||++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~ 300 (305)
T d1blxa_ 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 300 (305)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence 0112345789999999999999999999999999999998743
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.4e-54 Score=425.26 Aligned_cols=257 Identities=27% Similarity=0.400 Sum_probs=216.4
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|++.++||+|+||+||+|+++ +|+.||||++..... .....+.+.+|+.+|++++ ||||+++++++.+....+++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~i~ 78 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLV 78 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCC-CCcEEeeeeecccCCceeEE
Confidence 57999999999999999999985 789999999976542 3344578899999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
||++.++.+..+....+.+++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||.+.......
T Consensus 79 ~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll---~~~~~~kl~DfG~a~~~~~~~~ 155 (286)
T d1ob3a_ 79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVR 155 (286)
T ss_dssp EECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC---
T ss_pred EEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE---cCCCCEEecccccceecccCcc
Confidence 9999877776666667889999999999999999999999999999999999999 778899999999998765432
Q ss_pred ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCC--------------
Q 008475 258 IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFE-------------- 321 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~-------------- 321 (564)
......+++.|+|||.+.+ .++.++|||||||++|||++|+.||.+.+..+.+..+.+......
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T d1ob3a_ 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (286)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcc
Confidence 3345678999999999974 479999999999999999999999999888777766643211110
Q ss_pred -----------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCC
Q 008475 322 -----------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICE 361 (564)
Q Consensus 322 -----------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~ 361 (564)
....+.+++++++||++||++||++|||++|+|+||||++
T Consensus 236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred cccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence 0112457899999999999999999999999999999974
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-54 Score=430.26 Aligned_cols=253 Identities=21% Similarity=0.328 Sum_probs=213.2
Q ss_pred cccceeecccccccCCeEEEEEEEccCCc-----EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGI-----EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
-.++|++++.||+|+||+||+|++..+++ .||+|.+.... .......+.+|+.+++++.+|||||++++++.+
T Consensus 35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~ 112 (325)
T d1rjba_ 35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTL 112 (325)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc--CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEee
Confidence 34679999999999999999999876543 69999986543 334456788999999999669999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRG-----------------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKP 228 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~-----------------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp 228 (564)
...+|||||||++|+|.++|.... .+++..++.|+.||+.||.|||++|||||||||
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp 192 (325)
T d1rjba_ 113 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 192 (325)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSG
T ss_pred CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCch
Confidence 999999999999999999997542 488999999999999999999999999999999
Q ss_pred CcEEeecCCCCCcEEEeeCCCccccCCCCc---eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCC
Q 008475 229 ENFLLVNKDDDFSLKAIDFGLSVFFKPGQI---FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWA 303 (564)
Q Consensus 229 ~NIll~~~~~~~~~kl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~ 303 (564)
+|||+ +.++.+||+|||+|+....... .....||+.|+|||++. +.|+.++|||||||++|||+| |.+||.+
T Consensus 193 ~Nill---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~ 269 (325)
T d1rjba_ 193 RNVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 269 (325)
T ss_dssp GGEEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred hcccc---ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCC
Confidence 99999 6788999999999987654332 23466899999999987 469999999999999999998 8999988
Q ss_pred CCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 304 ETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 304 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+....+..+.+....++ .+..+|+++.+||.+||+.||++|||++||++|
T Consensus 270 ~~~~~~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 270 IPVDANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp CCCSHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCC--CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 776665655555544433 235689999999999999999999999999976
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.2e-53 Score=421.59 Aligned_cols=249 Identities=22% Similarity=0.355 Sum_probs=206.2
Q ss_pred cceeecccccccCCeEEEEEEEccCCc---EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGI---EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+.|++.++||+|+||+||+|.++.+++ .||||.+.... .....+.+.+|+++|++++ |||||++++++.++..+
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~ 102 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPV 102 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSSC
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeCCEE
Confidence 569999999999999999999887664 58889876433 4566778999999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+||||||++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 103 ~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~~ 179 (299)
T d1jpaa_ 103 MIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLE 179 (299)
T ss_dssp EEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC-------
T ss_pred EEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE---CCCCcEEECCcccceEcc
Confidence 9999999999999988764 569999999999999999999999999999999999999 788899999999998765
Q ss_pred CCCc------eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCC
Q 008475 255 PGQI------FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWP 326 (564)
Q Consensus 255 ~~~~------~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 326 (564)
.... .....||+.|+|||++. +.|+.++|||||||++|||+| |+.||.+.+..++...+.++... +...
T Consensus 180 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~---~~~~ 256 (299)
T d1jpaa_ 180 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL---PPPM 256 (299)
T ss_dssp ----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC---CCCT
T ss_pred CCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCc
Confidence 4322 12245789999999997 469999999999999999998 89999999999998888776432 2335
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 327 LISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 327 ~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+++++.+||.+||+.||++|||+.||+++
T Consensus 257 ~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 257 DCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp TCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred cchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 689999999999999999999999998764
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-54 Score=419.74 Aligned_cols=250 Identities=24% Similarity=0.406 Sum_probs=206.6
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||+||+|+.. ..||||++..... .....+.+.+|+.+|++++ |||||++++++. ...++|
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l~-HpnIv~~~~~~~-~~~~~l 80 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-APQLAI 80 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSC-CTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CCCEeeeeEEEe-ccEEEE
Confidence 456999999999999999999843 3699999975543 4556788999999999997 999999999865 456899
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCC
Q 008475 178 VMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPG 256 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~ 256 (564)
|||||++|+|.+++... .++++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 81 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl---~~~~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 81 VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRW 157 (276)
T ss_dssp EEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTSSEEECCCCCSCC----
T ss_pred EEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEE---cCCCCEEEccccceeecccc
Confidence 99999999999999754 569999999999999999999999999999999999999 67889999999999876432
Q ss_pred ---CceecccCCCcccchhhhhh----cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCccCC-CCCCCC
Q 008475 257 ---QIFTDVVGSPYYVAPEVLLK----HYGPEADVWTAGVILYILLSGVPPFWAETQQGI-FDAVLKGHIDFE-SDPWPL 327 (564)
Q Consensus 257 ---~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~~-~~~~~~ 327 (564)
.......||+.|+|||++.+ .|+.++|||||||++|||+||+.||.+.+.... ...+.++..... ......
T Consensus 158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 237 (276)
T d1uwha_ 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237 (276)
T ss_dssp --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTT
T ss_pred CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhcccc
Confidence 23456789999999999963 378899999999999999999999988765544 444444433221 223456
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+|+++.+||.+||..||++|||+++|++|
T Consensus 238 ~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 238 CPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 89999999999999999999999999876
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.8e-54 Score=420.00 Aligned_cols=247 Identities=23% Similarity=0.307 Sum_probs=212.8
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||+||+|.+..+++.||||++.... ...+.+.+|+.+|++++ |||||++++++.++..++|
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~i 90 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYI 90 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEE
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc----chHHHHHHHHHHHHhCC-CCCEecCCccEeeCCeeEE
Confidence 356999999999999999999999999999999987543 23567899999999997 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+....
T Consensus 91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFG~a~~~~~ 167 (287)
T d1opja_ 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTG 167 (287)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCCTTTCCS
T ss_pred EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEE---CCCCcEEEccccceeecCC
Confidence 99999999999998764 568999999999999999999999999999999999999 7788999999999987654
Q ss_pred CCc--eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQI--FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPF-WAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
... .....|++.|+|||++. +.|+.++|||||||++|||++|..|| .+.+...+.+.+..+. . .+....+|++
T Consensus 168 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~-~--~~~~~~~~~~ 244 (287)
T d1opja_ 168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-R--MERPEGCPEK 244 (287)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-C--CCCCTTCCHH
T ss_pred CCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCC-C--CCCCccchHH
Confidence 432 23345789999999987 46999999999999999999966654 5556666666665543 2 2233568999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhc
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+.+||.+||+.||++|||+++|++
T Consensus 245 l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 245 VYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHH
Confidence 999999999999999999999976
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-54 Score=418.24 Aligned_cols=246 Identities=23% Similarity=0.264 Sum_probs=208.9
Q ss_pred ccccccCCeEEEEEEEc--cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEEecc
Q 008475 105 RKLGQGQFGTTYLCTEI--ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVMELC 182 (564)
Q Consensus 105 ~~lG~G~fg~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 182 (564)
++||+|+||+||+|.+. .+++.||||++..... +....+.+.+|+.+|++++ |||||++++++.++ ..+||||||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~g~~~~~-~~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLD-NPYIVRMIGICEAE-SWMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCC-CTTBCCEEEEEESS-SEEEEEECC
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC-CHHHHHHHHHHHHHHHhCC-CCCCceEEEEeccC-CEEEEEEcC
Confidence 57999999999999864 3557899999965432 4445678999999999997 99999999998754 578999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCCc----
Q 008475 183 AGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQI---- 258 (564)
Q Consensus 183 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~~---- 258 (564)
++|+|.+++....++++..+..|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 90 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill---~~~~~~kl~DFGla~~~~~~~~~~~~ 166 (277)
T d1xbba_ 90 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKA 166 (277)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCEECCTTCSEEEC
T ss_pred CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcc---cccCcccccchhhhhhcccccccccc
Confidence 999999999998899999999999999999999999999999999999999 6778999999999987654332
Q ss_pred eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 008475 259 FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLI 336 (564)
Q Consensus 259 ~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 336 (564)
.....||+.|+|||++.+ .|+.++|||||||++|||+| |+.||.+.+..++...+.++.... ....+|+++.+||
T Consensus 167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~~~~li 243 (277)
T d1xbba_ 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG---CPAGCPREMYDLM 243 (277)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTCCHHHHHHH
T ss_pred ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCC---CCcccCHHHHHHH
Confidence 223578999999999974 59999999999999999998 899999999888888888765322 2346899999999
Q ss_pred HHhcccCCCCCCCHHHH---hcCCCc
Q 008475 337 RKMLCSQPSERLTAHEV---LCHPWI 359 (564)
Q Consensus 337 ~~~l~~dp~~R~s~~~v---l~hp~~ 359 (564)
.+||+.||++|||+.+| |+|+|+
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~~~~ 269 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRNYYY 269 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence 99999999999999998 456664
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-53 Score=431.00 Aligned_cols=260 Identities=26% Similarity=0.421 Sum_probs=215.9
Q ss_pred cccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC-
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL- 173 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 173 (564)
..+.++|+++++||+|+||+||+|.+..+|+.||||++.+.. ......+.+.+|+++|++++ |||||+++++|....
T Consensus 14 ~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~-hpniv~l~~~~~~~~~ 91 (346)
T d1cm8a_ 14 WEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDET 91 (346)
T ss_dssp ECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSCSS
T ss_pred eecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhh-cChHHHHHHHHHHHHHHhcC-CCCeeEEEEEeccCcc
Confidence 347789999999999999999999999999999999997543 35666788999999999997 999999999997654
Q ss_pred -----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCC
Q 008475 174 -----CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFG 248 (564)
Q Consensus 174 -----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG 248 (564)
.+||||||| +.+|...+ +.+++++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 92 ~~~~~~~~lv~e~~-~~~l~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~---~~~~~~kl~Dfg 166 (346)
T d1cm8a_ 92 LDDFTDFYLVMPFM-GTDLGKLM-KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFG 166 (346)
T ss_dssp TTTCCCCEEEEECC-SEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCT
T ss_pred ccccceEEEEEecc-cccHHHHH-HhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc---cccccccccccc
Confidence 579999999 66776654 55689999999999999999999999999999999999999 788899999999
Q ss_pred CccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc-------
Q 008475 249 LSVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID------- 319 (564)
Q Consensus 249 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~------- 319 (564)
+|..... ..+..+||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+....+..+......
T Consensus 167 ~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (346)
T d1cm8a_ 167 LARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 244 (346)
T ss_dssp TCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ceeccCC--ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHh
Confidence 9987543 3456789999999999874 4789999999999999999999999988876665544331111
Q ss_pred ----------------CC----CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 320 ----------------FE----SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 320 ----------------~~----~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.. ......+++++++||.+||..||.+|||++|+|+||||+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 245 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 11 112245789999999999999999999999999999998643
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-53 Score=424.92 Aligned_cols=263 Identities=25% Similarity=0.389 Sum_probs=216.9
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec------
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED------ 171 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~------ 171 (564)
.++|+++++||+|+||+||+|++..+|+.||||++..... ......++.+|+.+|++++ ||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-h~nii~~~~~~~~~~~~~~ 86 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYN 86 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----C-TTSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEC------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHHhc-CCCccceEeeeeccccccc
Confidence 3679999999999999999999999999999999876543 3344567889999999997 9999999999855
Q ss_pred --CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCC
Q 008475 172 --SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGL 249 (564)
Q Consensus 172 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~ 249 (564)
...+|+|||||.++.+.........+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 87 ~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl---~~~~~~kl~dfg~ 163 (318)
T d3blha1 87 RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGL 163 (318)
T ss_dssp ----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTT
T ss_pred ccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee---cCCCcEEeeecce
Confidence 45689999999877666555556789999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCC-----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC
Q 008475 250 SVFFKPGQ-----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES 322 (564)
Q Consensus 250 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 322 (564)
+....... .....+||+.|+|||++.+ .|+.++||||+||++|||++|+.||.+.+.......+.+....+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 97654322 2334679999999999874 5899999999999999999999999998888777776553333222
Q ss_pred CCCCC----------------------------CCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCCC
Q 008475 323 DPWPL----------------------------ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA 365 (564)
Q Consensus 323 ~~~~~----------------------------~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~~ 365 (564)
..+.. .++++++||.+||++||++|||++|+|+||||+....+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p~p 314 (318)
T d3blha1 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMP 314 (318)
T ss_dssp TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSSCC
T ss_pred hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccCCCC
Confidence 21111 36788999999999999999999999999999875443
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-53 Score=416.06 Aligned_cols=252 Identities=24% Similarity=0.322 Sum_probs=215.8
Q ss_pred cceeeccc-ccccCCeEEEEEEEcc--CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRK-LGQGQFGTTYLCTEIA--TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~-lG~G~fg~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+.|.+.+. ||+|+||+||+|.++. ++..||||++.... .....+.+.+|+++|++++ |||||++++++.++ .+
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~~-~~ 83 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLD-NPYIVRLIGVCQAE-AL 83 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-SE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhCC-CCCEeeEeeeeccC-eE
Confidence 45777774 9999999999998754 44579999996543 5666788999999999997 99999999998754 58
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
|||||||++|+|.+++.. +..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 84 ~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~ 160 (285)
T d1u59a_ 84 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALG 160 (285)
T ss_dssp EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---EETTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheee---ccCCceeeccchhhhccc
Confidence 999999999999998765 4579999999999999999999999999999999999999 667899999999998765
Q ss_pred CCCc----eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 255 PGQI----FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 255 ~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
.... .....||+.|+|||++. +.++.++|||||||++|||+| |+.||.+.+..++...+.++.... .++.+
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~ 237 (285)
T d1u59a_ 161 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME---CPPEC 237 (285)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCC---CCTTC
T ss_pred ccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCcC
Confidence 4332 22456889999999998 469999999999999999998 999999988888888888775432 23568
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHH---hcCCCcC
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEV---LCHPWIC 360 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~v---l~hp~~~ 360 (564)
|+++.+||.+||..||++|||+.+| |+|+|+.
T Consensus 238 ~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~ 272 (285)
T d1u59a_ 238 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272 (285)
T ss_dssp CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999887 5677764
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-53 Score=411.84 Aligned_cols=246 Identities=23% Similarity=0.364 Sum_probs=204.9
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||+||+|.+. ++..||||++..... ..+.+.+|++++++++ |||||++++++.+...++||
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~----~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~lv 78 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLV 78 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcC----cHHHHHHHHHHHHhcC-CCCcccccceeccCCceEEE
Confidence 35899999999999999999975 567899999975432 2356889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||||++|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+++......
T Consensus 79 ~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~~~~ 155 (263)
T d1sm2a_ 79 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ 155 (263)
T ss_dssp EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE---CGGGCEEECSCC---------
T ss_pred EEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee---cCCCCeEecccchheeccCCC
Confidence 9999999999988654 568999999999999999999999999999999999999 778899999999998765433
Q ss_pred --ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 258 --IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 258 --~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
......||+.|+|||++.+ .|+.++|||||||++|||+| |.+||...+..+++..+..+..... ...+++++.
T Consensus 156 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~---p~~~~~~l~ 232 (263)
T d1sm2a_ 156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHVY 232 (263)
T ss_dssp ---------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC---CTTSCHHHH
T ss_pred ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC---ccccCHHHH
Confidence 2234678999999999984 69999999999999999999 5777777888888888877644322 246789999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+||.+||+.||++|||+++|++|
T Consensus 233 ~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 233 QIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHH
Confidence 99999999999999999999876
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-53 Score=414.06 Aligned_cols=251 Identities=21% Similarity=0.299 Sum_probs=214.8
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
..+.|++.+.||+|+||.||+|.+. ++..||||++.... ...+.+.+|+.++++++ |||||++++++.+ +.++
T Consensus 11 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~-~~~~ 83 (272)
T d1qpca_ 11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIY 83 (272)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCE
T ss_pred CHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc----CCHHHHHHHHHHHHhCC-CCCEeEEEeeecc-CCeE
Confidence 4567999999999999999999975 67789999997543 23457899999999997 9999999998765 5678
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 177 IVMELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
||||||++|+|.+++... .++++..+..|+.||+.||.|||+++|+||||||+|||+ ++++.+||+|||+|+...
T Consensus 84 iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll---~~~~~~Kl~DFGla~~~~ 160 (272)
T d1qpca_ 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIE 160 (272)
T ss_dssp EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECS
T ss_pred EEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee---ecccceeeccccceEEcc
Confidence 999999999999877543 369999999999999999999999999999999999999 788999999999998875
Q ss_pred CCCc--eecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 255 PGQI--FTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSG-VPPFWAETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 255 ~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
.... .....||+.|+|||++. +.|+.++|||||||++|||+|| .+||...+..+++..+..+..... ...+++
T Consensus 161 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~---p~~~~~ 237 (272)
T d1qpca_ 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCPE 237 (272)
T ss_dssp SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC---CTTCCH
T ss_pred CCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC---cccChH
Confidence 5432 23467899999999998 4699999999999999999995 566777778888888877643322 246899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhc--CCCcC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLC--HPWIC 360 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~--hp~~~ 360 (564)
++.+||.+||+.||++|||+++|++ |+||.
T Consensus 238 ~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 9999999999999999999999998 78875
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-53 Score=426.37 Aligned_cols=252 Identities=29% Similarity=0.401 Sum_probs=211.5
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec------CC
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED------SL 173 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~------~~ 173 (564)
.|+..++||+|+||+||+|++..+|+.||||++.+... ...+|+.+|++++ ||||++++++|.. ..
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~-h~niv~~~~~~~~~~~~~~~~ 92 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEV 92 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------SCCHHHHHHHHCC-CTTBCCEEEEEEEC--CCSCC
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-------HHHHHHHHHHhcC-CCCCCcEEEEEEecCccCCce
Confidence 49999999999999999999999999999999976432 1237999999997 9999999999853 34
Q ss_pred eEEEEEeccCCCchHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCC-CcEEEeeCCC
Q 008475 174 CVHIVMELCAGGELFDR---IIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD-FSLKAIDFGL 249 (564)
Q Consensus 174 ~~~lv~e~~~~~~L~~~---l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~-~~~kl~DfG~ 249 (564)
++|||||||+++.+... ......+++..++.++.||+.||+|||++||+||||||+|||+ +.+ ..+||+|||+
T Consensus 93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl---~~~~~~~kl~DFG~ 169 (350)
T d1q5ka_ 93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGS 169 (350)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTTCCEEECCCTT
T ss_pred EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEE---ecCCCceeEecccc
Confidence 68999999976533322 2345679999999999999999999999999999999999999 544 4899999999
Q ss_pred ccccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC----------
Q 008475 250 SVFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH---------- 317 (564)
Q Consensus 250 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~---------- 317 (564)
+............+||+.|+|||++.+ .|+.++||||+||++|||++|++||...+..+.+..+.+..
T Consensus 170 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 249 (350)
T d1q5ka_ 170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249 (350)
T ss_dssp CEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred hhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhh
Confidence 998877777777899999999998874 58999999999999999999999999988877766654310
Q ss_pred -------ccCC--------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 318 -------IDFE--------SDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 318 -------~~~~--------~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
..++ ....+.+++++.+||.+||.+||++|||+.|+|+||||++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 0000 11124578999999999999999999999999999999864
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.2e-53 Score=406.65 Aligned_cols=246 Identities=23% Similarity=0.360 Sum_probs=217.1
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
+.|++.+.||+|+||+||+|+++ ++..||||++++... ..+.+.+|+.++++++ ||||+++++++.++..+++|
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~----~~~~~~~Ev~~~~~l~-HpnIv~~~g~~~~~~~~~iv 77 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFII 77 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS----CHHHHHHHHHHHHTCC-CTTBCCEEEEECCSSSEEEE
T ss_pred HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC----CHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEE
Confidence 35889999999999999999974 778999999976543 2357889999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 78 ~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~~~ 154 (258)
T d1k2pa_ 78 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE 154 (258)
T ss_dssp EECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE---CTTCCEEECCCSSCCBCSSSS
T ss_pred EEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE---cCCCcEEECcchhheeccCCC
Confidence 999999999988654 4679999999999999999999999999999999999999 778899999999998765433
Q ss_pred c--eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 258 I--FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 258 ~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
. .....||+.|+|||++.+ .|+.++|||||||++|||+| |+.||.+.+..++...+.++.... .+..+++++.
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~ 231 (258)
T d1k2pa_ 155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLASEKVY 231 (258)
T ss_dssp CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC---CCTTCCHHHH
T ss_pred ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCC---CcccccHHHH
Confidence 2 234678999999999984 69999999999999999998 899999999999999888765432 2356889999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+||.+||+.||++|||++++++|
T Consensus 232 ~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 232 TIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHH
Confidence 99999999999999999999987
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-53 Score=423.83 Aligned_cols=261 Identities=30% Similarity=0.497 Sum_probs=222.7
Q ss_pred cceeecccccccCCeEEEEEEEc---cCCcEEEEEEeccccCC-CHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEI---ATGIEFACKSISKRKLI-SREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
++|++++.||+|+||+||+|++. .+|+.||||++.+.... .....+.+.+|++++++++.||||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 56999999999999999999974 47899999999754321 222345678999999999855899999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 175 VHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
+++||||+.+|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~vkL~DFG~a~~~~ 180 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFV 180 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEECC
T ss_pred eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceee---cCCCCEEEeeccchhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999 778899999999998654
Q ss_pred CC--CceecccCCCcccchhhhhh---cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 255 PG--QIFTDVVGSPYYVAPEVLLK---HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 255 ~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
.. .......|++.|+|||.+.+ .++.++|||||||+||+|++|..||.+....+....+.++...........+|
T Consensus 181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s 260 (322)
T d1vzoa_ 181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS 260 (322)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSC
T ss_pred ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCC
Confidence 32 23455789999999999974 47889999999999999999999998876655555555544444444445689
Q ss_pred HHHHHHHHHhcccCCCCCC-----CHHHHhcCCCcCCC
Q 008475 330 DSAKDLIRKMLCSQPSERL-----TAHEVLCHPWICEN 362 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~-----s~~~vl~hp~~~~~ 362 (564)
+++.+||.+||.+||.+|| |++|+|+||||++.
T Consensus 261 ~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i 298 (322)
T d1vzoa_ 261 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298 (322)
T ss_dssp HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence 9999999999999999999 58999999999864
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2e-52 Score=419.82 Aligned_cols=254 Identities=29% Similarity=0.511 Sum_probs=212.9
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec--CCeE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED--SLCV 175 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~ 175 (564)
.++|+++++||+|+||+||+|++..+|+.||||++.+. ..+++.+|+.+|+.+.+||||++++++|.. ...+
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~ 107 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 107 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence 36799999999999999999999999999999999643 245788999999999779999999999974 4679
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 176 HIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
++|||||.+++|.... +.+++..++.++.||+.||.|||++||+||||||+|||+.. ++..+||+|||+|.....
T Consensus 108 ~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~--~~~~vkl~DFG~a~~~~~ 182 (328)
T d3bqca1 108 ALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHP 182 (328)
T ss_dssp EEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCGGGCEECCT
T ss_pred eEEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC--CCCeeeecccccceeccC
Confidence 9999999999997653 56999999999999999999999999999999999999942 345699999999998877
Q ss_pred CCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHc-------------CCcc
Q 008475 256 GQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQ-QGIFDAVLK-------------GHID 319 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~-------------~~~~ 319 (564)
.......++|+.|+|||.+.+ .|+.++||||+||++|+|++|..||..... .+....+.+ ....
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 262 (328)
T d3bqca1 183 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 262 (328)
T ss_dssp TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred CCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccc
Confidence 777778899999999999874 489999999999999999999999976542 222222111 0000
Q ss_pred --------------------CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 320 --------------------FESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 320 --------------------~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
........+++++++||.+||++||.+|||++|+|+||||+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v 325 (328)
T d3bqca1 263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325 (328)
T ss_dssp CCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred cCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 0111223478999999999999999999999999999999864
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-52 Score=410.32 Aligned_cols=260 Identities=25% Similarity=0.394 Sum_probs=221.6
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIV 178 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv 178 (564)
++|+++++||+|+||+||+|++..+++.||||+++.... ......++.+|+.+|+.++ ||||+++++++.+....++|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~iv 79 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC-ChHHHHHHHHHHHHHHhcC-cCCEEeeccccccccceeEE
Confidence 479999999999999999999999999999999975543 4456788999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC-
Q 008475 179 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ- 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~- 257 (564)
+|++.+++|..++...+.+++..++.++.|++.||+|||++||+||||||+|||+ +.++.+||+|||.+.......
T Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli---~~~~~~kl~DFG~a~~~~~~~~ 156 (292)
T d1unla_ 80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSCCS
T ss_pred eeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccc---ccCCceeeeecchhhcccCCCc
Confidence 9999999998888888899999999999999999999999999999999999999 677889999999998765433
Q ss_pred ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHcCCccC--------------
Q 008475 258 IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFW-AETQQGIFDAVLKGHIDF-------------- 320 (564)
Q Consensus 258 ~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~-~~~~~~~~~~i~~~~~~~-------------- 320 (564)
......+++.|+|||++.+ .++.++||||+||++|||++|+.||. +.+..+.+..+.......
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (292)
T d1unla_ 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccc
Confidence 3344567889999999874 37899999999999999999999864 555555555543211110
Q ss_pred -----------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCC
Q 008475 321 -----------ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENG 363 (564)
Q Consensus 321 -----------~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~ 363 (564)
.......+++.+.+||.+||++||.+|||++|||+||||++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~ 290 (292)
T d1unla_ 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred cccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence 0112235688999999999999999999999999999998643
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-52 Score=422.47 Aligned_cols=261 Identities=28% Similarity=0.441 Sum_probs=213.8
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCC--
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSL-- 173 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-- 173 (564)
++.++|+++++||+|+||+||+|.+..+|+.||||++.+.. .....+.+.+|+.+|++|+ ||||+++++++....
T Consensus 5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~-hp~iv~~~~~~~~~~~~ 81 (345)
T d1pmea_ 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIE 81 (345)
T ss_dssp CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTT
T ss_pred CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHcC-CCCCCcEEEEEeecccc
Confidence 34567999999999999999999999999999999997543 4566778899999999997 999999999997543
Q ss_pred ---eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 174 ---CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 174 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
.+|+++ ++.+|+|.+++.. +++++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||++
T Consensus 82 ~~~~~~l~~-~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl---~~~~~~kl~DfG~a 156 (345)
T d1pmea_ 82 QMKDVYLVT-HLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA 156 (345)
T ss_dssp TCCCEEEEE-ECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred ccceEEEEE-eecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE---CCCCCEEEcccCce
Confidence 355555 5559999998865 479999999999999999999999999999999999999 77889999999999
Q ss_pred cccCCCC----ceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCcc-----
Q 008475 251 VFFKPGQ----IFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHID----- 319 (564)
Q Consensus 251 ~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~----- 319 (564)
....... .....+||+.|+|||++.. .++.++||||+||++|+|++|+.||.+.+..+...........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (345)
T d1pmea_ 157 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 236 (345)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred eeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhh
Confidence 8654322 2345779999999999863 4789999999999999999999999888766555444221000
Q ss_pred ---------------CCC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 320 ---------------FES-------DPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 320 ---------------~~~-------~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
.+. ..++.+++++++||.+||+.||.+|||++|+|+||||+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~ 303 (345)
T d1pmea_ 237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 303 (345)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred hhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence 000 113457889999999999999999999999999999996544
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-52 Score=404.47 Aligned_cols=249 Identities=24% Similarity=0.325 Sum_probs=205.1
Q ss_pred ccceeecccccccCCeEEEEEEEccCC---cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATG---IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+++|++++.||+|+||+||+|++..++ ..||||.+.... .....+.+.+|+.++++++ |||||++++++. ++.
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~-~~~ 81 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFD-HPHIVKLIGVIT-ENP 81 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEC-SSS
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEe-cCe
Confidence 467999999999999999999986543 468899885432 5566778999999999997 999999999986 467
Q ss_pred EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
+|+|||||++|+|.+++.. ...+++..++.++.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+|+..
T Consensus 82 ~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll---~~~~~~Kl~DfG~a~~~ 158 (273)
T d1mp8a_ 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYM 158 (273)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECC-------
T ss_pred EEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheee---cCCCcEEEccchhheec
Confidence 8999999999999988765 4569999999999999999999999999999999999999 66779999999999876
Q ss_pred CCCC--ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 254 KPGQ--IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 254 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
.... ......||+.|+|||++.+ .|+.++|||||||++|||+| |.+||.+.+..+++..+..+... +.++.+|
T Consensus 159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~~ 235 (273)
T d1mp8a_ 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNCP 235 (273)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTTCC
T ss_pred cCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCC
Confidence 5332 3345678999999999984 69999999999999999998 89999999999999988877543 2345789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+++.+||.+||..||++|||+.||++|
T Consensus 236 ~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 236 PTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999999999999999765
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-51 Score=402.22 Aligned_cols=248 Identities=20% Similarity=0.335 Sum_probs=205.2
Q ss_pred cceeecccccccCCeEEEEEEEccCC----cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCe
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATG----IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLC 174 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 174 (564)
+.|++.++||+|+||.||+|.+..++ ..||||++.... .......+.+|+.++++++ |||||++++++.+...
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~-H~nIv~~~g~~~~~~~ 83 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFS-HHNIIRLEGVISKYKP 83 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhcC-CCCEeeeeEEEecCCc
Confidence 45899999999999999999987654 469999986433 4555667899999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCcccc
Q 008475 175 VHIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 253 (564)
Q Consensus 175 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~ 253 (564)
.++|||||.++++.+.+... +.+++..+..++.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~ 160 (283)
T d1mqba_ 84 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVL 160 (283)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC----
T ss_pred eEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE---CCCCeEEEcccchhhcc
Confidence 99999999999999877654 579999999999999999999999999999999999999 78889999999999876
Q ss_pred CCCC----ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCccCCCCCCCC
Q 008475 254 KPGQ----IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSG-VPPFWAETQQGIFDAVLKGHIDFESDPWPL 327 (564)
Q Consensus 254 ~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (564)
.... ......||+.|+|||++.+ .++.++|||||||++|||++| .+||...+..+++..+..+... +....
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~ 237 (283)
T d1mqba_ 161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL---PTPMD 237 (283)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC---CCCTT
T ss_pred cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCC---CCchh
Confidence 4432 2233568999999999974 699999999999999999995 5556667777888887776432 22346
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 328 ISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 328 ~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+++++.+||.+||..||++|||+.+|++
T Consensus 238 ~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 238 CPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp CBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 8999999999999999999999999876
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-52 Score=419.24 Aligned_cols=261 Identities=25% Similarity=0.412 Sum_probs=216.9
Q ss_pred ccccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecC---
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDS--- 172 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--- 172 (564)
++.++|+++++||+|+||+||+|++..+|+.||||++.+.. .+....+++.+|+++|++++ |||||++++++...
T Consensus 15 ~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~-h~~iv~~~~~~~~~~~~ 92 (348)
T d2gfsa1 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 92 (348)
T ss_dssp EEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSST
T ss_pred cCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchh-cChHHHHHHHHHHHHHHhcC-CCCeeeEEEEEeecccc
Confidence 45678999999999999999999999999999999997543 35566678899999999997 99999999999642
Q ss_pred --CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 173 --LCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 173 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
...+++|+++.||+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||+ +.++.+|++|||++
T Consensus 93 ~~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi---~~~~~~kl~dfg~a 168 (348)
T d2gfsa1 93 EEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA 168 (348)
T ss_dssp TTCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCC---
T ss_pred ccCceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc---cccccccccccchh
Confidence 334556677779999987754 579999999999999999999999999999999999999 77889999999999
Q ss_pred cccCCCCceecccCCCcccchhhhhh--cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCccCCC------
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFES------ 322 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~------ 322 (564)
.... .......||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+.......+.+.......
T Consensus 169 ~~~~--~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (348)
T d2gfsa1 169 RHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246 (348)
T ss_dssp -CCT--GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTC
T ss_pred cccC--cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhc
Confidence 7643 33456788999999998875 3789999999999999999999999998887777666543221110
Q ss_pred -----------------C----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCCCC
Q 008475 323 -----------------D----PWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGV 364 (564)
Q Consensus 323 -----------------~----~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~~~ 364 (564)
. .+..+++++++||.+||+.||.+|||++|+|+||||++...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~ 309 (348)
T d2gfsa1 247 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309 (348)
T ss_dssp CCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred cchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCC
Confidence 0 12357899999999999999999999999999999997543
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-52 Score=419.06 Aligned_cols=258 Identities=26% Similarity=0.414 Sum_probs=205.0
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-----
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED----- 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----- 171 (564)
+.++|+++++||+|+||+||+|.+..+|+.||||++.+... +.....++.+|+.++++++ ||||++++++|..
T Consensus 15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~f~~~~~~~ 92 (355)
T d2b1pa1 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTLE 92 (355)
T ss_dssp EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCSTT
T ss_pred ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc-CHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEecccccc
Confidence 44779999999999999999999999999999999976543 5666778999999999997 9999999999963
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCc
Q 008475 172 -SLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLS 250 (564)
Q Consensus 172 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~ 250 (564)
...+|+|||||.+ ++.+.+ ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+|++|||++
T Consensus 93 ~~~~~~iv~Ey~~~-~l~~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~---~~~~~~kl~df~~~ 166 (355)
T d2b1pa1 93 EFQDVYLVMELMDA-NLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 166 (355)
T ss_dssp TCCEEEEEEECCSE-EHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC-
T ss_pred cCceeEEEEeccch-HHHHhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc---ccccceeeechhhh
Confidence 4789999999965 455555 3569999999999999999999999999999999999999 77788999999999
Q ss_pred cccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCc-----------
Q 008475 251 VFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHI----------- 318 (564)
Q Consensus 251 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~----------- 318 (564)
............++|+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+.......+.....
T Consensus 167 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 246 (355)
T d2b1pa1 167 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246 (355)
T ss_dssp --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSC
T ss_pred hccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhh
Confidence 88776666777889999999999985 599999999999999999999999998887666555432111
Q ss_pred -----------cCCCCC----------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCCCcCCC
Q 008475 319 -----------DFESDP----------------WPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 362 (564)
Q Consensus 319 -----------~~~~~~----------------~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~hp~~~~~ 362 (564)
...... ....++++++||++||..||++|||++|||+||||+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~ 317 (355)
T d2b1pa1 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 317 (355)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred hhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 000000 01135788999999999999999999999999999863
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-51 Score=400.52 Aligned_cols=253 Identities=24% Similarity=0.346 Sum_probs=210.1
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEE
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~l 177 (564)
.++|++.+.||+|+||+||+|++..+ ..||||++..... ..+.+.+|+.++++++ |||||++++++.+ +.+++
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~----~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~-~~~~l 88 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYI 88 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEE
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccC----CHHHHHHHHHHHHhcc-cCCEeEEEEEEec-CCeEE
Confidence 35699999999999999999998654 5799999975432 2467899999999997 9999999999865 45789
Q ss_pred EEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQ--RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
|||||++|+|..++.. .+.+++.++..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 89 v~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll---~~~~~~kl~DfGla~~~~~ 165 (285)
T d1fmka3 89 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIED 165 (285)
T ss_dssp EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCTTC----
T ss_pred EEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEE---CCCCcEEEcccchhhhccC
Confidence 9999999999988854 3579999999999999999999999999999999999999 7778999999999987654
Q ss_pred CC--ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHH
Q 008475 256 GQ--IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSG-VPPFWAETQQGIFDAVLKGHIDFESDPWPLISDS 331 (564)
Q Consensus 256 ~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 331 (564)
.. ......||+.|+|||++. +.++.++|||||||++|||++| .+|+.+....+++..+.++... +..+.++++
T Consensus 166 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~ 242 (285)
T d1fmka3 166 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---PCPPECPES 242 (285)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTSCHH
T ss_pred CCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC---CCCcccCHH
Confidence 33 233467899999999998 4699999999999999999995 5556667777788888776432 233568999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhc--CCCcCCCC
Q 008475 332 AKDLIRKMLCSQPSERLTAHEVLC--HPWICENG 363 (564)
Q Consensus 332 ~~~li~~~l~~dp~~R~s~~~vl~--hp~~~~~~ 363 (564)
+.+||.+||+.||++|||+++|++ |+||....
T Consensus 243 l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~ 276 (285)
T d1fmka3 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 276 (285)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred HHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence 999999999999999999999998 89997643
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-51 Score=409.04 Aligned_cols=250 Identities=23% Similarity=0.330 Sum_probs=212.5
Q ss_pred cceeecccccccCCeEEEEEEEccCCcE--EEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIE--FACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~--vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
++|++.+.||+|+||+||+|+++.+|.. ||||.+.... .....+.+.+|+++|+++.+|||||++++++.+.+.++
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc--ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 4589999999999999999999888874 6777765332 34456679999999999955999999999999999999
Q ss_pred EEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCC
Q 008475 177 IVMELCAGGELFDRIIQR----------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 240 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~ 240 (564)
||||||++|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||+ +.++
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~---~~~~ 164 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENY 164 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGG
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE---cCCC
Confidence 999999999999998754 568999999999999999999999999999999999999 7778
Q ss_pred cEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHcCCc
Q 008475 241 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGV-PPFWAETQQGIFDAVLKGHI 318 (564)
Q Consensus 241 ~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~-~pf~~~~~~~~~~~i~~~~~ 318 (564)
.+||+|||+++............||..|+|||.+.+ .|+.++|||||||++|||++|. +||.+.+..+++..+.++..
T Consensus 165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~ 244 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 244 (309)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCC
Confidence 999999999987654444455678999999999974 6999999999999999999965 67888888888888877642
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 319 DFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 319 ~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
.+.+..+++++++||.+||+.||++|||+.+|++|
T Consensus 245 ---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 245 ---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp ---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ---CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 22335689999999999999999999999999986
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-51 Score=407.07 Aligned_cols=247 Identities=21% Similarity=0.283 Sum_probs=207.1
Q ss_pred ceeecccccccCCeEEEEEEEccCCc----EEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGI----EFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
+|+++++||+|+||+||+|.+..+|+ +||+|.+.... .....+.+.+|+.++++++ |||||++++++.++ ..
T Consensus 10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~-~~ 85 (317)
T d1xkka_ 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVD-NPHVCRLLGICLTS-TV 85 (317)
T ss_dssp TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-SE
T ss_pred HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC-Ce
Confidence 49999999999999999999988876 57888775432 3445678999999999997 99999999999875 56
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++++|++.+|+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+...
T Consensus 86 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll---~~~~~~kl~DFGla~~~~ 162 (317)
T d1xkka_ 86 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLG 162 (317)
T ss_dssp EEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCCSHHHHTT
T ss_pred eEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhccee---CCCCCeEeeccccceecc
Confidence 7888999999999887664 579999999999999999999999999999999999999 677899999999998765
Q ss_pred CCCc---eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCC
Q 008475 255 PGQI---FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLIS 329 (564)
Q Consensus 255 ~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 329 (564)
.... .....||+.|+|||++.+ .|+.++|||||||++|||+| |.+||.+.+..++...+.++.... ..+.++
T Consensus 163 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~---~p~~~~ 239 (317)
T d1xkka_ 163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---QPPICT 239 (317)
T ss_dssp TTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCC---CCTTBC
T ss_pred cccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---CCcccC
Confidence 4332 234568999999999874 69999999999999999998 899999988888888887765322 224689
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 330 DSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 330 ~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+++.+||.+||..||.+|||+.+|++|
T Consensus 240 ~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 240 IDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 999999999999999999999999987
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-51 Score=399.08 Aligned_cols=250 Identities=24% Similarity=0.319 Sum_probs=203.9
Q ss_pred cceeecccccccCCeEEEEEEEcc-CC--cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIA-TG--IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCV 175 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~-~~--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 175 (564)
++|++.+.||+|+||.||+|+... ++ ..||||++.+.........+.+.+|+.+|++++ ||||+++++++.+ ..+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~~~g~~~~-~~~ 85 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLT-PPM 85 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSC
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEee-cch
Confidence 459999999999999999998643 33 368999997766555666788999999999997 9999999999976 467
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccC
Q 008475 176 HIVMELCAGGELFDRIIQ-RGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 254 (564)
Q Consensus 176 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~ 254 (564)
++|||||++|+|.+.+.. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll---~~~~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALP 162 (273)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCTTCEECC
T ss_pred heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcc---ccccceeeccchhhhhcc
Confidence 899999999999987765 4569999999999999999999999999999999999999 566789999999999865
Q ss_pred CCCc----eecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCC
Q 008475 255 PGQI----FTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLI 328 (564)
Q Consensus 255 ~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 328 (564)
.... .....|+..|+|||++.+ .++.++|||||||++|||+| |..||.+.+..++...+.+....++ ....+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~ 240 (273)
T d1u46a_ 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP--RPEDC 240 (273)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC--CCTTC
T ss_pred cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCC--Ccccc
Confidence 4432 223457889999999985 58999999999999999998 8999999999999998887765443 23568
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 329 SDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 329 s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
|+++.+||.+||..||++|||+.+|++
T Consensus 241 ~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 241 PQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 999999999999999999999999863
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-51 Score=404.70 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=202.1
Q ss_pred cccceeecccccccCCeEEEEEEEcc-----CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIA-----TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
..++|++.+.||+|+||.||+|.+.. +++.||||++.... .....+.+.+|..++.++..|+||+.+++++..
T Consensus 11 ~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~ 88 (299)
T d1ywna1 11 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTK 88 (299)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeecc
Confidence 34679999999999999999999754 34689999986433 455567788899999998779999999998765
Q ss_pred -CCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEee
Q 008475 172 -SLCVHIVMELCAGGELFDRIIQR----------------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV 234 (564)
Q Consensus 172 -~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~ 234 (564)
+..+++|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 89 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl- 167 (299)
T d1ywna1 89 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL- 167 (299)
T ss_dssp TTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE-
T ss_pred CCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE-
Confidence 45689999999999999999753 248899999999999999999999999999999999999
Q ss_pred cCCCCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHH-
Q 008475 235 NKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSG-VPPFWAETQQG- 308 (564)
Q Consensus 235 ~~~~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~- 308 (564)
+.++.+||+|||+|+...... ......||+.|+|||++.+ .++.++|||||||++|||+|| .+||.+....+
T Consensus 168 --~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~ 245 (299)
T d1ywna1 168 --SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 245 (299)
T ss_dssp --CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred --CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHH
Confidence 778899999999998654332 2334679999999999985 599999999999999999996 56787665444
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+...+..+.. + .....+++++.+||.+||+.||++|||++||++|
T Consensus 246 ~~~~~~~~~~-~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 246 FCRRLKEGTR-M--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp HHHHHHHTCC-C--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCC-C--CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 4444444432 2 2234689999999999999999999999999987
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-50 Score=401.50 Aligned_cols=250 Identities=22% Similarity=0.292 Sum_probs=216.4
Q ss_pred cccceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED 171 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 171 (564)
.+++|++.+.||+|+||+||+|+++ .+++.||||++.... .....+.+.+|+.+|++++ ||||+++++++..
T Consensus 11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~ 87 (301)
T d1lufa_ 11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-NPNIVKLLGVCAV 87 (301)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECS
T ss_pred CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhcC-CCCcccceeeecc
Confidence 4567999999999999999999975 356789999986543 4556678999999999997 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCC
Q 008475 172 SLCVHIVMELCAGGELFDRIIQRG------------------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLK 227 (564)
Q Consensus 172 ~~~~~lv~e~~~~~~L~~~l~~~~------------------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlk 227 (564)
....++||||+++|+|.+++.... .+++..+..|+.||+.||+|||+++|||||||
T Consensus 88 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlK 167 (301)
T d1lufa_ 88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA 167 (301)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEc
Confidence 999999999999999999986532 37889999999999999999999999999999
Q ss_pred CCcEEeecCCCCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCC-CCCC
Q 008475 228 PENFLLVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGV-PPFW 302 (564)
Q Consensus 228 p~NIll~~~~~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~-~pf~ 302 (564)
|+|||+ +.++.+||+|||+|+...+.. ......|++.|+|||++.+ .|+.++|||||||++|||++|. +||.
T Consensus 168 p~NILl---d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~ 244 (301)
T d1lufa_ 168 TRNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 244 (301)
T ss_dssp GGGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred ccceEE---CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCC
Confidence 999999 778899999999998654332 2345678899999999985 5999999999999999999985 6899
Q ss_pred CCCHHHHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 303 AETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 303 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+.+..++...+.++.... ....+++++.+||.+||+.||++|||+.||++
T Consensus 245 ~~~~~e~~~~v~~~~~~~---~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 245 GMAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp TSCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 999999999998876432 23468999999999999999999999999864
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-50 Score=398.38 Aligned_cols=251 Identities=25% Similarity=0.406 Sum_probs=213.2
Q ss_pred cccceeecccccccCCeEEEEEEEccCC-------cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATG-------IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
..++|++++.||+|+||.||+|++..++ ..||||++.+.. .......+.+|...+.++.+|||||++++++
T Consensus 11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~ 88 (299)
T d1fgka_ 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 88 (299)
T ss_dssp CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEeccccc
Confidence 4578999999999999999999976544 479999996543 4556678899999999996699999999999
Q ss_pred ecCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEe
Q 008475 170 EDSLCVHIVMELCAGGELFDRIIQRG----------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLL 233 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll 233 (564)
.++..+++|||||++|+|.+++.... .+++..+..++.||+.||+|||+++||||||||+|||+
T Consensus 89 ~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl 168 (299)
T d1fgka_ 89 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 168 (299)
T ss_dssp CSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred ccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee
Confidence 99999999999999999999997543 48999999999999999999999999999999999999
Q ss_pred ecCCCCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 008475 234 VNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQG 308 (564)
Q Consensus 234 ~~~~~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~ 308 (564)
+.++.+||+|||++....... ......+|+.|+|||.+. +.|+.++|||||||++|||++ |.+||.+.+...
T Consensus 169 ---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~ 245 (299)
T d1fgka_ 169 ---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245 (299)
T ss_dssp ---CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred ---cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH
Confidence 778899999999998765432 234467899999999987 569999999999999999998 799999999888
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 309 IFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+...+..+... + ....+++++.+||.+||+.||.+|||+.||++
T Consensus 246 ~~~~i~~~~~~-~--~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 246 LFKLLKEGHRM-D--KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp HHHHHHTTCCC-C--CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHcCCCC-C--CCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 88888776432 2 23468999999999999999999999999976
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-51 Score=392.58 Aligned_cols=242 Identities=24% Similarity=0.313 Sum_probs=202.3
Q ss_pred cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-CCeEEE
Q 008475 99 DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-SLCVHI 177 (564)
Q Consensus 99 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-~~~~~l 177 (564)
++|++++.||+|+||.||+|.+ +|..||||++++.. ..+.+.+|++++++++ ||||+++++++.+ ...+|+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~-----~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~l 78 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYI 78 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CCEE
T ss_pred HHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHH-----HHHHHHHHHHHHHhCC-CCCEeeEEEEEEecCCcEEE
Confidence 4589999999999999999997 47799999996532 3467889999999997 9999999998854 566899
Q ss_pred EEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 178 VMELCAGGELFDRIIQRG--HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 178 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
||||+++|+|.+++...+ .+++..++.|+.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+++....
T Consensus 79 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~s~~~~~ 155 (262)
T d1byga_ 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASS 155 (262)
T ss_dssp EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC------
T ss_pred EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee---cCCCCEeecccccceecCC
Confidence 999999999999996643 48999999999999999999999999999999999999 7888999999999987543
Q ss_pred CCceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCccCCCCCCCCCCHHHH
Q 008475 256 GQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAK 333 (564)
Q Consensus 256 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 333 (564)
. .....+++.|+|||++. +.++.++|||||||++|||+| |++||...+..++...+.++... +....+++++.
T Consensus 156 ~--~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~ 230 (262)
T d1byga_ 156 T--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM---DAPDGCPPAVY 230 (262)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC---CCCTTCCHHHH
T ss_pred C--CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCccCCHHHH
Confidence 3 34457889999999997 469999999999999999998 79999998888888888765432 22346889999
Q ss_pred HHHHHhcccCCCCCCCHHHHhcC
Q 008475 334 DLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 334 ~li~~~l~~dp~~R~s~~~vl~h 356 (564)
+||.+||+.||.+|||+.+++++
T Consensus 231 ~li~~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 231 EVMKNCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcccCHhHCcCHHHHHHH
Confidence 99999999999999999999764
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-49 Score=396.27 Aligned_cols=253 Identities=23% Similarity=0.335 Sum_probs=213.6
Q ss_pred ccccceeecccccccCCeEEEEEEEc-----cCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEe
Q 008475 96 NIRDLYTLGRKLGQGQFGTTYLCTEI-----ATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYE 170 (564)
Q Consensus 96 ~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 170 (564)
...++|+++++||+|+||.||+|++. .+++.||||++.... .......+.+|+.+++++.+|||||++++++.
T Consensus 20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~ 97 (311)
T d1t46a_ 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (311)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe
Confidence 34577999999999999999999863 466789999997543 45566789999999999977999999999999
Q ss_pred cCCeEEEEEeccCCCchHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008475 171 DSLCVHIVMELCAGGELFDRIIQRG------------------HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFL 232 (564)
Q Consensus 171 ~~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIl 232 (564)
+...++||||||++|+|.+++.... .+++..+..++.||+.||.|||+++|+||||||+|||
T Consensus 98 ~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl 177 (311)
T d1t46a_ 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL 177 (311)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccc
Confidence 9999999999999999999987643 5899999999999999999999999999999999999
Q ss_pred eecCCCCCcEEEeeCCCccccCCCC---ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH
Q 008475 233 LVNKDDDFSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLS-GVPPFWAETQQ 307 (564)
Q Consensus 233 l~~~~~~~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~ 307 (564)
+ +..+.+||+|||+++...... ......||+.|+|||++. +.++.++|||||||++|||+| |.+||...+..
T Consensus 178 ~---~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~ 254 (311)
T d1t46a_ 178 L---THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254 (311)
T ss_dssp E---ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred c---cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH
Confidence 9 677899999999998765432 223467899999999998 468999999999999999999 66667666665
Q ss_pred HHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 308 GIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
+.+..+........ ....+|+++.+||.+||+.||++|||+.+|++
T Consensus 255 ~~~~~~i~~~~~~~--~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 255 SKFYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp HHHHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhcCCCCC--CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 55544444333322 22468999999999999999999999999875
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-49 Score=393.71 Aligned_cols=258 Identities=22% Similarity=0.306 Sum_probs=221.8
Q ss_pred cccccceeecccccccCCeEEEEEEEcc-----CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEE
Q 008475 95 DNIRDLYTLGRKLGQGQFGTTYLCTEIA-----TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAY 169 (564)
Q Consensus 95 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 169 (564)
+...++|++.++||+|+||.||+|.+.. ++..||||++.... .......+.+|+.+++++. ||||+++++++
T Consensus 16 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~ 92 (308)
T d1p4oa_ 16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVV 92 (308)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCC-CTTBCCEEEEE
T ss_pred eecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHcC-CCCEeeeeeEE
Confidence 3345789999999999999999998753 45789999996543 5556677899999999997 99999999999
Q ss_pred ecCCeEEEEEeccCCCchHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCC
Q 008475 170 EDSLCVHIVMELCAGGELFDRIIQR----------GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDD 239 (564)
Q Consensus 170 ~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~ 239 (564)
......++|||||++|+|.+++... ..+++..+..++.|++.||.|||+++|+||||||+|||+ +.+
T Consensus 93 ~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl---d~~ 169 (308)
T d1p4oa_ 93 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AED 169 (308)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---CTT
T ss_pred ecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee---cCC
Confidence 9999999999999999999988643 246889999999999999999999999999999999999 788
Q ss_pred CcEEEeeCCCccccCCCC---ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHH
Q 008475 240 FSLKAIDFGLSVFFKPGQ---IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSG-VPPFWAETQQGIFDAVL 314 (564)
Q Consensus 240 ~~~kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~ 314 (564)
+.+||+|||+|+...... ......||+.|+|||.+.+ .++.++|||||||++|||+|| .+||.+.+..+++..+.
T Consensus 170 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~ 249 (308)
T d1p4oa_ 170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 249 (308)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred ceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 899999999998664332 2234568999999999985 588999999999999999998 58899999999999888
Q ss_pred cCCccCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc------CCCcCC
Q 008475 315 KGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC------HPWICE 361 (564)
Q Consensus 315 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~------hp~~~~ 361 (564)
++.... ..+.+++.+.+||.+||+.||++|||+.+|++ +|+|++
T Consensus 250 ~~~~~~---~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~ 299 (308)
T d1p4oa_ 250 EGGLLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299 (308)
T ss_dssp TTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred hCCCCC---CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence 876432 23468999999999999999999999999998 666653
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-48 Score=386.75 Aligned_cols=259 Identities=22% Similarity=0.273 Sum_probs=206.5
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.++|++.+.||+|+||+||+|++..+|+.||||++..... ...+..|+++++.+..|++|+.+..++.+....+
T Consensus 5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ 79 (299)
T d1ckia_ 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79 (299)
T ss_dssp ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEE
T ss_pred ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEE
Confidence 44679999999999999999999999999999999875432 2346789999999985566777778888899999
Q ss_pred EEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCC
Q 008475 177 IVMELCAGGELFDRII-QRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKP 255 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~ 255 (564)
+||||+ +++|...+. ..+.+++..+..++.|++.||+|||++||+||||||+|||+...+.+..+||+|||+|+....
T Consensus 80 ivme~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~ 158 (299)
T d1ckia_ 80 MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158 (299)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred EEEEEc-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence 999999 556666554 456799999999999999999999999999999999999996556677899999999987653
Q ss_pred CC--------ceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---cCCccCC-C
Q 008475 256 GQ--------IFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVL---KGHIDFE-S 322 (564)
Q Consensus 256 ~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~---~~~~~~~-~ 322 (564)
.. .....+||+.|+|||++.+ .++.++|||||||++|||++|..||...........+. ......+ .
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ckia_ 159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 238 (299)
T ss_dssp TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHH
T ss_pred cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChh
Confidence 32 2345689999999999986 49999999999999999999999998765543332221 1111111 1
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHH---HHhcCCCcCC
Q 008475 323 DPWPLISDSAKDLIRKMLCSQPSERLTAH---EVLCHPWICE 361 (564)
Q Consensus 323 ~~~~~~s~~~~~li~~~l~~dp~~R~s~~---~vl~hp~~~~ 361 (564)
...+.+|+++.+||.+||..||++||++. ++|+|+|.+.
T Consensus 239 ~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~ 280 (299)
T d1ckia_ 239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280 (299)
T ss_dssp HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHc
Confidence 12346899999999999999999999987 4577777643
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-48 Score=383.15 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=206.7
Q ss_pred ecccccccCCeEEEEEEEccCC---cEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEec-CCeEEEE
Q 008475 103 LGRKLGQGQFGTTYLCTEIATG---IEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYED-SLCVHIV 178 (564)
Q Consensus 103 ~~~~lG~G~fg~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-~~~~~lv 178 (564)
..++||+|+||+||+|.+..++ ..||||++.+. ......+++.+|+++|++++ ||||+++++++.. +...++|
T Consensus 31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~lv 107 (311)
T d1r0pa_ 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVV 107 (311)
T ss_dssp EEEEEEEETTEEEEEEEECC----CEEEEEEEECCC--CCHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEETTTEEEEE
T ss_pred cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc--cCHHHHHHHHHHHHHHHhCC-CCCEeEEeEEEEecCCceEEE
Confidence 3578999999999999986543 36899998643 35667788999999999997 9999999999764 5689999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEeeCCCccccCCCC
Q 008475 179 MELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ 257 (564)
Q Consensus 179 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~~~~~~ 257 (564)
||||++|+|.+++... ..+++..+..++.|++.||.|||+.+|+||||||+|||+ ++++.+||+|||+++......
T Consensus 108 ~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl---~~~~~~kL~DFG~~~~~~~~~ 184 (311)
T d1r0pa_ 108 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKE 184 (311)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSSGGGCCTTTTT
T ss_pred EEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE---CCCCCEEEecccchhhccccc
Confidence 9999999999988754 357788999999999999999999999999999999999 788899999999998764332
Q ss_pred -----ceecccCCCcccchhhhh-hcCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCccCCCCCCCCCCH
Q 008475 258 -----IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWA-ETQQGIFDAVLKGHIDFESDPWPLISD 330 (564)
Q Consensus 258 -----~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~ 330 (564)
......||+.|+|||.+. +.++.++|||||||++|||+||..||.. .+..++...+..+..... .+.+++
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~---p~~~~~ 261 (311)
T d1r0pa_ 185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PEYCPD 261 (311)
T ss_dssp CCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCC---CTTCCH
T ss_pred cccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC---cccCcH
Confidence 222356899999999987 5699999999999999999997777654 444556667777653322 246889
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcC------CCcCCC
Q 008475 331 SAKDLIRKMLCSQPSERLTAHEVLCH------PWICEN 362 (564)
Q Consensus 331 ~~~~li~~~l~~dp~~R~s~~~vl~h------p~~~~~ 362 (564)
++.+||.+||..||++|||+.||++| +|..++
T Consensus 262 ~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~~ 299 (311)
T d1r0pa_ 262 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 299 (311)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999999999999998 666553
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.3e-47 Score=375.82 Aligned_cols=253 Identities=18% Similarity=0.274 Sum_probs=207.5
Q ss_pred cccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 97 IRDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 97 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
+.++|++++.||+|+||+||+|++..+|+.||||++..... ...+.+|+++++.|..|+||+.+++++..+...+
T Consensus 3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 77 (293)
T d1csna_ 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 77 (293)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccE
Confidence 45679999999999999999999999999999999865432 2346789999999986799999999999999999
Q ss_pred EEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCC--CCCcEEEeeCCCcccc
Q 008475 177 IVMELCAGGELFDRIIQR-GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKD--DDFSLKAIDFGLSVFF 253 (564)
Q Consensus 177 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~--~~~~~kl~DfG~~~~~ 253 (564)
+||||+ +++|.+.+... ..++...+..++.|++.||+|||++||+||||||+|||+.... ..+.+||+|||+|+..
T Consensus 78 ~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~ 156 (293)
T d1csna_ 78 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 156 (293)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred EEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence 999999 78999888765 4699999999999999999999999999999999999995422 3568999999999875
Q ss_pred CCC--------CceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCccC-
Q 008475 254 KPG--------QIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQ---QGIFDAVLKGHIDF- 320 (564)
Q Consensus 254 ~~~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~~~~~- 320 (564)
... ......+||+.|+|||++.+ .++.++|||||||++|||+||..||.+... ......+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (293)
T d1csna_ 157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 236 (293)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCC
Confidence 432 12345689999999999986 499999999999999999999999976443 33333333222111
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008475 321 ESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLC 355 (564)
Q Consensus 321 ~~~~~~~~s~~~~~li~~~l~~dp~~R~s~~~vl~ 355 (564)
.....+.+|+++.+++..|+..+|++||+++.+.+
T Consensus 237 ~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~ 271 (293)
T d1csna_ 237 LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271 (293)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred hHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 11123468899999999999999999999876543
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-47 Score=375.26 Aligned_cols=246 Identities=22% Similarity=0.272 Sum_probs=190.6
Q ss_pred ccceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHH--HHHHHHhhcCCCCccEEEEEEecCC--
Q 008475 98 RDLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRR--EIQIMHHLAGHKNIVTIKGAYEDSL-- 173 (564)
Q Consensus 98 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~--E~~~l~~l~~h~niv~~~~~~~~~~-- 173 (564)
...|.+.+.||+|+||.||+|+. +|+.||||++.... .....+ |+..+.+++ ||||+++++++.+..
T Consensus 2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~------~~~~~~e~ei~~~~~~~-HpnIv~~~~~~~~~~~~ 72 (303)
T d1vjya_ 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLR-HENILGFIAADNKDNGT 72 (303)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSS
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc------hhHHHHHHHHHHHhhCC-CCcCcceEEEEEeCCCc
Confidence 45689999999999999999985 68899999986432 233333 455555676 999999999997643
Q ss_pred --eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH--------CCCEeecCCCCcEEeecCCCCCcEE
Q 008475 174 --CVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHS--------LGVMHRDLKPENFLLVNKDDDFSLK 243 (564)
Q Consensus 174 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~--------~~iiH~Dlkp~NIll~~~~~~~~~k 243 (564)
.+|+|||||++|+|.+++... ++++..+..++.|++.||.|||+ +||+||||||+|||| +.++.+|
T Consensus 73 ~~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl---~~~~~~K 148 (303)
T d1vjya_ 73 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCC 148 (303)
T ss_dssp SEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE---CTTSCEE
T ss_pred ceEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE---cCCCCeE
Confidence 689999999999999999764 69999999999999999999996 599999999999999 7889999
Q ss_pred EeeCCCccccCCCC-----ceecccCCCcccchhhhhhc-------CCCcchHHHHHHHHHHHHhCCCCCCCC-------
Q 008475 244 AIDFGLSVFFKPGQ-----IFTDVVGSPYYVAPEVLLKH-------YGPEADVWTAGVILYILLSGVPPFWAE------- 304 (564)
Q Consensus 244 l~DfG~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-------~~~~~DvwSlG~il~elltg~~pf~~~------- 304 (564)
|+|||++....... ......||+.|+|||++.+. ++.++|||||||++|||+||..||...
T Consensus 149 l~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~ 228 (303)
T d1vjya_ 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp ECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred EEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccch
Confidence 99999998764432 23357899999999998742 577899999999999999998876321
Q ss_pred --------CHHHHHHHHHcCCccCCCCC-C--CCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008475 305 --------TQQGIFDAVLKGHIDFESDP-W--PLISDSAKDLIRKMLCSQPSERLTAHEVLCH 356 (564)
Q Consensus 305 --------~~~~~~~~i~~~~~~~~~~~-~--~~~s~~~~~li~~~l~~dp~~R~s~~~vl~h 356 (564)
........+..+......+. + ...+..+.+|+.+||+.||++|||+.||+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~ 291 (303)
T d1vjya_ 229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred hhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 12233333333332211110 0 1123468899999999999999999999764
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.5e-45 Score=369.85 Aligned_cols=264 Identities=23% Similarity=0.419 Sum_probs=198.5
Q ss_pred ccccc-cceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhc----------CCCCc
Q 008475 94 TDNIR-DLYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLA----------GHKNI 162 (564)
Q Consensus 94 ~~~~~-~~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~----------~h~ni 162 (564)
.+.+. .+|+++++||+|+||+||+|++..+|+.||||++++. ....+.+.+|+.+++.+. +|+||
T Consensus 7 g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~----~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~i 82 (362)
T d1q8ya_ 7 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHI 82 (362)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTB
T ss_pred CCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc----ccchHHHHHHHHHHHHhcchhhhhhhhcCcCce
Confidence 34444 4699999999999999999999999999999999753 334567788999998875 26889
Q ss_pred cEEEEEEec--CCeEEEEEeccCCCchHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEeecC
Q 008475 163 VTIKGAYED--SLCVHIVMELCAGGELFDRI---IQRGHYSERKAAELTRIIVGVVEACHS-LGVMHRDLKPENFLLVNK 236 (564)
Q Consensus 163 v~~~~~~~~--~~~~~lv~e~~~~~~L~~~l---~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~Dlkp~NIll~~~ 236 (564)
+++++++.. ....+++|+++..+...... .....+++..++.++.||+.||.|||+ .||+||||||+|||+...
T Consensus 83 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~ 162 (362)
T d1q8ya_ 83 LKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV 162 (362)
T ss_dssp CCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEE
T ss_pred EEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeecc
Confidence 999998864 45667777776554433222 234578999999999999999999998 899999999999999532
Q ss_pred CCC---CcEEEeeCCCccccCCCCceecccCCCcccchhhhhh-cCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-----
Q 008475 237 DDD---FSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQ----- 307 (564)
Q Consensus 237 ~~~---~~~kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~----- 307 (564)
+.. ..++|+|||.+..... .....+||+.|+|||++.+ .|+.++||||+||++++|++|+.||......
T Consensus 163 ~~~~~~~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~ 240 (362)
T d1q8ya_ 163 DSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 240 (362)
T ss_dssp ETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CcccccceeeEeeccccccccc--ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccch
Confidence 221 2499999999986542 3356789999999998884 5999999999999999999999999654321
Q ss_pred -HHHHHHHc--CCc---------------------cC---------------CCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 008475 308 -GIFDAVLK--GHI---------------------DF---------------ESDPWPLISDSAKDLIRKMLCSQPSERL 348 (564)
Q Consensus 308 -~~~~~i~~--~~~---------------------~~---------------~~~~~~~~s~~~~~li~~~l~~dp~~R~ 348 (564)
..+..... +.. .. ........++++++||.+||.+||.+||
T Consensus 241 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rp 320 (362)
T d1q8ya_ 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 320 (362)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred hHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCc
Confidence 11111100 000 00 0001112457899999999999999999
Q ss_pred CHHHHhcCCCcCCCC
Q 008475 349 TAHEVLCHPWICENG 363 (564)
Q Consensus 349 s~~~vl~hp~~~~~~ 363 (564)
|++|||+||||++..
T Consensus 321 ta~e~L~Hp~f~~~~ 335 (362)
T d1q8ya_ 321 DAGGLVNHPWLKDTL 335 (362)
T ss_dssp CHHHHHTCGGGTTCT
T ss_pred CHHHHhcCcccCCCC
Confidence 999999999999653
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=2.9e-26 Score=209.79 Aligned_cols=166 Identities=19% Similarity=0.218 Sum_probs=124.0
Q ss_pred eeecccccccCCeEEEEEEEccCCcEEEEEEeccccCC-----C----------HHhHHHHHHHHHHHHhhcCCCCccEE
Q 008475 101 YTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI-----S----------REDVEDVRREIQIMHHLAGHKNIVTI 165 (564)
Q Consensus 101 y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~-----~----------~~~~~~~~~E~~~l~~l~~h~niv~~ 165 (564)
+.++++||+|+||+||+|.+. +|+.||||++...... . .........|...+.++. |++++..
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~v~~~ 79 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPKV 79 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCCE
T ss_pred chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc-CCCcceE
Confidence 567899999999999999974 7899999987532110 0 111234567889999997 9999998
Q ss_pred EEEEecCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEeecCCCCCcEEEe
Q 008475 166 KGAYEDSLCVHIVMELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAI 245 (564)
Q Consensus 166 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~Dlkp~NIll~~~~~~~~~kl~ 245 (564)
+++.. .+++|||+++..+.+ ++...+..++.|++.||.|||++||+||||||+|||+. ++ .++|+
T Consensus 80 ~~~~~----~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~---~~-~~~li 144 (191)
T d1zara2 80 YAWEG----NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS---EE-GIWII 144 (191)
T ss_dssp EEEET----TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE---TT-EEEEC
T ss_pred EEecC----CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee---CC-CEEEE
Confidence 87532 279999998766532 55666788999999999999999999999999999994 33 48999
Q ss_pred eCCCccccCCCCceecccCCCcccc------hhhhhhcCCCcchHHHHHHH
Q 008475 246 DFGLSVFFKPGQIFTDVVGSPYYVA------PEVLLKHYGPEADVWTAGVI 290 (564)
Q Consensus 246 DfG~~~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~DvwSlG~i 290 (564)
|||+|.....+.. ..|.. .+.+.+.|+.++|+||+.--
T Consensus 145 DFG~a~~~~~~~~-------~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~ 188 (191)
T d1zara2 145 DFPQSVEVGEEGW-------REILERDVRNIITYFSRTYRTEKDINSAIDR 188 (191)
T ss_dssp CCTTCEETTSTTH-------HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred ECCCcccCCCCCc-------HHHHHHHHHHHHHHHcCCCCCcccHHHHHHH
Confidence 9999976543221 11222 23445679999999998643
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.88 E-value=1.5e-22 Score=176.23 Aligned_cols=141 Identities=40% Similarity=0.698 Sum_probs=130.8
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch-hhHH
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK-LERE 476 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~-~~~~ 476 (564)
+++++++..++++|..+|.+++|.|+.+||..++...+..++...+..++..+|.+++|.|+|+||+..+..... ....
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 81 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 81 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence 578899999999999999999999999999999999999999999999999999999999999999988754433 3456
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
+.++.+|+.+|.|++|.|+.+||+.++..+| +++++++++|+.+|.|+||.|+|+||+++|.
T Consensus 82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~ 145 (146)
T d1exra_ 82 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 145 (146)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence 7899999999999999999999999999887 8999999999999999999999999999885
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.88 E-value=1.2e-22 Score=183.52 Aligned_cols=148 Identities=25% Similarity=0.413 Sum_probs=136.7
Q ss_pred HHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHH
Q 008475 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAF 483 (564)
Q Consensus 404 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F 483 (564)
.++|+++|+.+|.|++|+|+.+||..+|+.++..++..+++.++..+|.+++|.|+|++|...+.. ...+..+|
T Consensus 17 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~------~~~~~~~F 90 (182)
T d1y1xa_ 17 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMREGF 90 (182)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhcccccccccccccccccccccc------ccccccch
Confidence 357999999999999999999999999999999999999999999999999999999999886642 34577889
Q ss_pred HHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCC
Q 008475 484 QYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAP 561 (564)
Q Consensus 484 ~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~ 561 (564)
+.+|.+++|.|+.+||++++..+| +++++++.+|..+|.|+||.|+|+||++++... ..+.++|+.+|.+++
T Consensus 91 ~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~l------~~~~~~F~~~D~~~~ 164 (182)
T d1y1xa_ 91 RKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV------CRVRNVFAFYDRERT 164 (182)
T ss_dssp HHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCC
T ss_pred hccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHHH------HHHHHHHHHhCCCCC
Confidence 999999999999999999999987 789999999999999999999999999998655 678999999999999
Q ss_pred CC
Q 008475 562 GS 563 (564)
Q Consensus 562 g~ 563 (564)
|+
T Consensus 165 G~ 166 (182)
T d1y1xa_ 165 GQ 166 (182)
T ss_dssp SE
T ss_pred Cc
Confidence 96
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.87 E-value=5.3e-22 Score=171.72 Aligned_cols=138 Identities=21% Similarity=0.447 Sum_probs=124.8
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh-hchhhHHH
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREE 477 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~-~~~~~~~~ 477 (564)
+++++++.++++|..+|.+++|.|+..||..+++.+|.+++..++..++. +++|.|+|.+|+.++.. +.....++
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~ 76 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEE 76 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchhh
Confidence 57899999999999999999999999999999999999999999998885 56789999999998764 33445577
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 478 HLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 478 ~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
.+..+|+.+|.+++|+|+.+||+.++..+| ++++++.++|+.+|.| +|+|+|+||+++|...+
T Consensus 77 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~~ 141 (142)
T d1wdcb_ 77 TIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSG 141 (142)
T ss_dssp HHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTSC
T ss_pred hHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhcCC
Confidence 899999999999999999999999999988 8999999999999988 69999999999998653
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.86 E-value=1.2e-21 Score=176.76 Aligned_cols=149 Identities=23% Similarity=0.390 Sum_probs=135.0
Q ss_pred HHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCC-CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHH
Q 008475 403 EIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGS-TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVA 481 (564)
Q Consensus 403 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~ 481 (564)
+..+|..+|+.+|.|++|+|+.+||..+++.++. ..+..+++.++..+|.+++|.|+|+||+.++... ..++.
T Consensus 17 ~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~~ 90 (181)
T d1hqva_ 17 DQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQN 90 (181)
T ss_dssp CHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHHH
T ss_pred cHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc------ccccc
Confidence 4467999999999999999999999999988775 4688999999999999999999999999887543 34678
Q ss_pred HHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccC
Q 008475 482 AFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRD 559 (564)
Q Consensus 482 ~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~ 559 (564)
+|+.+|.+++|.|+.+||+.++...+ ++++++.+++..+|.+++|.|+|+||+.++... +.+.++|+.+|++
T Consensus 91 ~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~l------~~l~~~F~~~D~~ 164 (181)
T d1hqva_ 91 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL------QRLTDIFRRYDTD 164 (181)
T ss_dssp HHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTT
T ss_pred ccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCC
Confidence 99999999999999999999998876 899999999999999999999999999988765 6789999999999
Q ss_pred CCCC
Q 008475 560 APGS 563 (564)
Q Consensus 560 ~~g~ 563 (564)
+||.
T Consensus 165 ~dG~ 168 (181)
T d1hqva_ 165 QDGW 168 (181)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 9994
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=1e-21 Score=170.96 Aligned_cols=142 Identities=37% Similarity=0.645 Sum_probs=130.2
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch-hhH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK-LER 475 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~-~~~ 475 (564)
.+++++++..++++|+.+|.|++|+|+.+||..++...+..++...+..++...+.++.+.++|++|...+..... ...
T Consensus 2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 81 (146)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999987655433 345
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
.+.++.+|+.+|++++|+|+.+||+.++..+| +++++++++|..+| |+||+|+|+||+++|.+
T Consensus 82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~k 146 (146)
T d1lkja_ 82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 146 (146)
T ss_dssp HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHCC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhCC
Confidence 67799999999999999999999999999887 89999999999999 99999999999999853
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=2.5e-21 Score=170.91 Aligned_cols=142 Identities=23% Similarity=0.340 Sum_probs=126.1
Q ss_pred HhhhhhcccCCCCCCCCHHHHHHHHHhhCCCC-----CHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHH
Q 008475 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTL-----KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVA 481 (564)
Q Consensus 407 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~-----~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~ 481 (564)
+..+|+.+ ++.+|.|+.+||..+|+..+.+. +.+.++.++..+|.+++|.|+|+||+.++.. ...++.
T Consensus 2 ~~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~------~~~~~~ 74 (165)
T d1k94a_ 2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA------LNAWKE 74 (165)
T ss_dssp HHHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH------HHHHHH
T ss_pred hHHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhc------cchhHH
Confidence 45677777 68899999999999999887643 5788999999999999999999999987754 345789
Q ss_pred HHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccC
Q 008475 482 AFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRD 559 (564)
Q Consensus 482 ~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~ 559 (564)
+|+.+|+|++|.|+.+||+.++..+| +++++++.++..+|. +|.|+|+||+.++..+ +.+.++|+++|++
T Consensus 75 ~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~l------~~~~~~F~~~D~d 146 (165)
T d1k94a_ 75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVKL------RALTDFFRKRDHL 146 (165)
T ss_dssp HHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHHH------HHHHHHHHTTCTT
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHHH------HHHHHHHHHhCCC
Confidence 99999999999999999999999988 799999999999975 5899999999998766 7789999999999
Q ss_pred CCCC
Q 008475 560 APGS 563 (564)
Q Consensus 560 ~~g~ 563 (564)
++|+
T Consensus 147 ~~G~ 150 (165)
T d1k94a_ 147 QQGS 150 (165)
T ss_dssp CCSE
T ss_pred CCCc
Confidence 9995
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=4.8e-21 Score=165.55 Aligned_cols=138 Identities=30% Similarity=0.609 Sum_probs=127.2
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-hhhHHHH
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-KLEREEH 478 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~~~~~~~ 478 (564)
|+++.+.++++|..+|+|++|.|+..||..+++.++..++...+..++..+|.+++|.|+|.||...+.... .......
T Consensus 1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 80 (141)
T d2obha1 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE 80 (141)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHH
Confidence 467888999999999999999999999999999999999999999999999999999999999998765433 2344677
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 479 LVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 479 l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
+..+|..+|.+++|.|+..+|..++..+| ++++++..+|+.+|.|+||.|+|+||+++|
T Consensus 81 l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m 141 (141)
T d2obha1 81 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred HHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence 89999999999999999999999999887 899999999999999999999999999876
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.85 E-value=5.7e-21 Score=169.26 Aligned_cols=145 Identities=37% Similarity=0.615 Sum_probs=130.6
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc----
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN---- 471 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~---- 471 (564)
...++++++..++++|..+|.+++|+|+.+||..++..++..+....+..++..+|.+++|.|++.||...+....
T Consensus 11 ~~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~ 90 (162)
T d1topa_ 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA 90 (162)
T ss_dssp HHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH
T ss_pred HccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhc
Confidence 3467899999999999999999999999999999999999999999999999999999999999999987654332
Q ss_pred hhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 472 KLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 472 ~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.....+.++.+|+.+|.|++|.|+.+||+.++...+ .++++++.+|+.+|.|+||.|+|+||+++|..+
T Consensus 91 ~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 161 (162)
T d1topa_ 91 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred ccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHcC
Confidence 223456678899999999999999999999999876 789999999999999999999999999998753
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.85 E-value=1.2e-21 Score=176.89 Aligned_cols=152 Identities=24% Similarity=0.331 Sum_probs=116.7
Q ss_pred hhhHHHH-HhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCC--------CCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 398 SLSEEEI-AGLKEMFKAMDTDNSGAITFDELKAGLRRYGST--------LKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 398 ~~~~~~~-~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~--------~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
.++++++ +.++++|+.+| +.+|.|+..||..+|...+.. ++.+.++.++..+|.+++|.|+|+||..++.
T Consensus 12 ~ls~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~ 90 (188)
T d1qxpa2 12 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWN 90 (188)
T ss_dssp ---------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Confidence 4566665 46899999999 458999999999998765433 4567899999999999999999999998875
Q ss_pred hhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCCh
Q 008475 469 HLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGR 546 (564)
Q Consensus 469 ~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~ 546 (564)
.. ..++.+|+.+|+|++|.|+..||+.+|..+| ++++.++.++.. +.|++|.|+|+||+.++..+
T Consensus 91 ~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~-~~~~dg~i~f~eFi~~~~~l------ 157 (188)
T d1qxpa2 91 RI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR-FADDELIIDFDNFVRCLVRL------ 157 (188)
T ss_dssp HH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH-TSCSSSBCCHHHHHHHHHHH------
T ss_pred hh------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH-hcCCCCcCCHHHHHHHHHHH------
Confidence 43 4577899999999999999999999999988 687777777765 66999999999999999765
Q ss_pred HHHHHHHhHHccCCCCC
Q 008475 547 RTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 547 ~~~~~~f~~~D~~~~g~ 563 (564)
+.+.++|+.+|++++|+
T Consensus 158 ~~~~~~F~~~D~~~~G~ 174 (188)
T d1qxpa2 158 EILFKIFKQLDPENTGT 174 (188)
T ss_dssp HHHHHHHHHSCSSCCSC
T ss_pred HHHHHHHHHhCCCCCCe
Confidence 67899999999999996
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.84 E-value=5.9e-21 Score=167.13 Aligned_cols=142 Identities=25% Similarity=0.425 Sum_probs=124.6
Q ss_pred hhHHHHHhHhhhhhcccC--CCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch--hh
Q 008475 399 LSEEEIAGLKEMFKAMDT--DNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK--LE 474 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~--d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~--~~ 474 (564)
+|++++..++++|..+|. +++|.|+..||..+|+.+|.+++..++..+. ..|.+++|.|+|+||+.++..... ..
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~~ 79 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQG 79 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCCC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh-hhhccccccccccccccccccccccchh
Confidence 578899999999999995 8899999999999999999999999998764 457888999999999998765433 23
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCC--CCcceeHHHHHHHHHcCC
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQD--NDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d--~dg~I~~~eF~~~~~~~~ 541 (564)
....+..+|+.+|.+++|+|+.+||+.+|..+| +++++++++++.+|.+ ++|.|+|+||++.|...+
T Consensus 80 ~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~~p 150 (152)
T d1wdcc_ 80 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 150 (152)
T ss_dssp CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCS
T ss_pred HHHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhcCC
Confidence 457789999999999999999999999999987 8999999999999865 568999999999887543
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.84 E-value=3.5e-22 Score=180.48 Aligned_cols=145 Identities=73% Similarity=1.170 Sum_probs=134.7
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~ 476 (564)
..++++++..|+++|+.+|.|++|.|+.+||..++..++..++..+++.+|..+|.+++|.|+|++|+..+.........
T Consensus 2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 81 (182)
T d1s6ia_ 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE 81 (182)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccH
Confidence 46788889999999999999999999999999999999999999999999999999999999999999987665555555
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
+.+..+|+.+|.+++|.|+.++|++++..+|+++++++.+|+.+|.|+||+|+|+||+++|.+..
T Consensus 82 e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~~ 146 (182)
T d1s6ia_ 82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK 146 (182)
T ss_dssp CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred HHHHHHHHHHhhcCCCccchhhhhhhhhhcCccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhCc
Confidence 67889999999999999999999999999999999999999999999999999999999998763
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.84 E-value=6.9e-21 Score=167.57 Aligned_cols=145 Identities=34% Similarity=0.597 Sum_probs=129.3
Q ss_pred hhhhhhHHHHHhHhhhhhcccCCC-CCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh---
Q 008475 395 IAESLSEEEIAGLKEMFKAMDTDN-SGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL--- 470 (564)
Q Consensus 395 ~~~~~~~~~~~~l~~~F~~~D~d~-~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~--- 470 (564)
..+.+++++++.++++|+.+|.++ +|.|+..||..+|+.+|..++..++..++..++.+++|.+++.+|.......
T Consensus 4 ~~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (156)
T d1dtla_ 4 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 83 (156)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhcccc
Confidence 356889999999999999999995 8999999999999999999999999999999999999999999998754322
Q ss_pred -chhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 471 -NKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 471 -~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
.....++.+..+|+.+|.+++|+|+.+||+.++..+| +++++++++|+.+|.|+||.|+|+||+++|..
T Consensus 84 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g 155 (156)
T d1dtla_ 84 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 155 (156)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred cccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence 2224567889999999999999999999999998877 89999999999999999999999999999863
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.84 E-value=5.2e-21 Score=171.36 Aligned_cols=148 Identities=22% Similarity=0.347 Sum_probs=128.4
Q ss_pred HHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCC--------CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh
Q 008475 402 EEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST--------LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL 473 (564)
Q Consensus 402 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~--------~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~ 473 (564)
+++++++++|..+|. .+|.|+..||..+|..++.. .+.+.++.++..+|.+++|.|+|+||+..+..
T Consensus 1 ee~~~~r~~F~~~d~-~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~---- 75 (173)
T d1alva_ 1 EEVRQFRRLFAQLAG-DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN---- 75 (173)
T ss_dssp CHHHHHHHHHHHHHG-GGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH----
T ss_pred ChHHHHHHHHHHHcC-CCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhh----
Confidence 467889999999994 48999999999999887532 56788999999999999999999999887743
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHH
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRN 551 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~ 551 (564)
...+..+|+.+|.+++|.|+..||+.+|+..| ++++.++.++ .+|.|++|.|+|+||++++... +.+.+
T Consensus 76 --~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~-~~d~d~~G~i~~~EF~~~~~~~------~~~~~ 146 (173)
T d1alva_ 76 --IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMII-RRYSDEGGNMDFDNFISCLVRL------DAMFR 146 (173)
T ss_dssp --HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHH-HHHTCSSSCBCHHHHHHHHHHH------HHHHH
T ss_pred --hhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhh-ccccCCCCeEeHHHHHHHHHHH------HHHHH
Confidence 33467899999999999999999999998877 7777776655 5666999999999999999765 78899
Q ss_pred HHhHHccCCCCC
Q 008475 552 SLNMSMRDAPGS 563 (564)
Q Consensus 552 ~f~~~D~~~~g~ 563 (564)
+|+.+|+|++|+
T Consensus 147 ~f~~~D~d~~G~ 158 (173)
T d1alva_ 147 AFKSLDKDGTGQ 158 (173)
T ss_dssp HHHHHSSSCCSE
T ss_pred HHHHhCCCCCCc
Confidence 999999999995
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.84 E-value=3.1e-21 Score=174.93 Aligned_cols=151 Identities=22% Similarity=0.318 Sum_probs=130.4
Q ss_pred hhHHHH-HhHhhhhhcccCCCCCCCCHHHHHHHHHhhCC--------CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 399 LSEEEI-AGLKEMFKAMDTDNSGAITFDELKAGLRRYGS--------TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 399 ~~~~~~-~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~--------~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
++.+++ +.++++|..+| +++|.|+..||..+|..++. ..+...+..++..+|.+++|.|+|+||...+..
T Consensus 11 ~~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~ 89 (186)
T d1df0a1 11 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK 89 (186)
T ss_dssp CCCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Confidence 344444 45889999998 99999999999999987643 356788999999999999999999999988754
Q ss_pred hchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChH
Q 008475 470 LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRR 547 (564)
Q Consensus 470 ~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~ 547 (564)
. ..+..+|+.+|+|++|.|+.+||+.+|+..| ++++. .+++..+|.|++|.|+|+||++++..+ +
T Consensus 90 ~------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~-~~~~~~~d~d~dg~I~f~eFi~~~~~l------~ 156 (186)
T d1df0a1 90 I------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQL-HQVIVARFADDELIIDFDNFVRCLVRL------E 156 (186)
T ss_dssp H------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHHH-HHHHHHHHCCSTTEECHHHHHHHHHHH------H
T ss_pred H------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHHH-HHHHHHHHcCCCCeEeHHHHHHHHHHH------H
Confidence 3 4578999999999999999999999999988 67655 456667899999999999999999766 7
Q ss_pred HHHHHHhHHccCCCCC
Q 008475 548 TMRNSLNMSMRDAPGS 563 (564)
Q Consensus 548 ~~~~~f~~~D~~~~g~ 563 (564)
.+.++|+.+|++|+|+
T Consensus 157 ~~~~~F~~~D~~~~G~ 172 (186)
T d1df0a1 157 ILFKIFKQLDPENTGT 172 (186)
T ss_dssp HHHHHHHHHCTTCCSE
T ss_pred HHHHHHHHhCCCCCCc
Confidence 8999999999999995
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=1.2e-20 Score=168.82 Aligned_cols=149 Identities=25% Similarity=0.358 Sum_probs=131.1
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCC-----CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhh
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGST-----LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLE 474 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-----~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~ 474 (564)
+.++...++..|..++ ++||.|+..||..+|+.++.+ ++.+.++.++..+|.|++|.|+|+||+.++...
T Consensus 2 p~~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~---- 76 (172)
T d1juoa_ 2 PGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL---- 76 (172)
T ss_dssp TTCCCCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH----
T ss_pred CcchHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhh----
Confidence 4455667899999996 889999999999999998755 457889999999999999999999999877532
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHH
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNS 552 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~ 552 (564)
..+..+|+.+|.+++|.|+.+|++.++..+| ++++++..++.++|. +|.|+|+||++++... +.+.++
T Consensus 77 --~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d~--~g~i~~~eF~~~~~~~------~~~~~~ 146 (172)
T d1juoa_ 77 --NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCVKL------RALTDS 146 (172)
T ss_dssp --HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTCS--SSSEEHHHHHHHHHHH------HHHHHH
T ss_pred --hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHh--cCCcCHHHHHHHHHHH------HHHHHH
Confidence 3467889999999999999999999999887 789999999999964 5789999999999876 688999
Q ss_pred HhHHccCCCCC
Q 008475 553 LNMSMRDAPGS 563 (564)
Q Consensus 553 f~~~D~~~~g~ 563 (564)
|+.+|+|++|+
T Consensus 147 f~~~D~d~~G~ 157 (172)
T d1juoa_ 147 FRRRDTAQQGV 157 (172)
T ss_dssp HHHTCTTCCSE
T ss_pred HHHhCCCCCCc
Confidence 99999999995
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.83 E-value=1.8e-20 Score=162.63 Aligned_cols=134 Identities=25% Similarity=0.423 Sum_probs=118.1
Q ss_pred HHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC--CCCccchhhhHHHHhhhch---hhHHHH
Q 008475 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVD--NSGTIDYGEFIAATVHLNK---LEREEH 478 (564)
Q Consensus 404 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~--~~g~I~~~eF~~~~~~~~~---~~~~~~ 478 (564)
.+.++++|+.+|.|++|.|+.+||..+|+.+|.+++..++..++..++.+ ++|.|+|+||...+..... ......
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 82 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFED 82 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHH
Confidence 35688999999999999999999999999999999999999999887654 6889999999987654332 234567
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 479 LVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 479 l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
+..+|+.+|.+++|+|+.+||+.+|..+| +++++++++++ .+.|+||.|+|+||++.|.
T Consensus 83 l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~-~~~d~dG~I~y~eF~~~ll 143 (145)
T d2mysc_ 83 FVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVKHIM 143 (145)
T ss_pred HHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHh-hcCCCCCeEEHHHHHHHHh
Confidence 89999999999999999999999999887 88999999997 4889999999999999875
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.83 E-value=1.8e-20 Score=162.60 Aligned_cols=139 Identities=25% Similarity=0.424 Sum_probs=120.8
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh-hchhhHHH
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREE 477 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~-~~~~~~~~ 477 (564)
|+++++..++++|..+|.+++|.|+.+||..+|+.+|..++..+ ++..++.+++|.|+|++|+..+.. .......+
T Consensus 1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~ 77 (145)
T d2mysb_ 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKGADPED 77 (145)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHH---HHHHHHHhccCceeechhhhhhhhcccccchHH
Confidence 57889999999999999999999999999999999986544332 334445577899999999987654 34445567
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 478 HLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 478 ~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+..+|+.+|.+++|.|+.+||+++|..+| ++++++++++..+|.|++|.|+|.||+++|...
T Consensus 78 ~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~~ 142 (145)
T d2mysb_ 78 VIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 142 (145)
T ss_pred HHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhccC
Confidence 799999999999999999999999999988 899999999999999999999999999999765
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.82 E-value=2.2e-20 Score=159.71 Aligned_cols=128 Identities=23% Similarity=0.413 Sum_probs=115.5
Q ss_pred hhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch---hhHHHHHHHHHH
Q 008475 408 KEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK---LEREEHLVAAFQ 484 (564)
Q Consensus 408 ~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~---~~~~~~l~~~F~ 484 (564)
..+|+.+|.|++|.|+.+||..++..++..++..+++.+|..+|.+++|.|+|+||...+..... ......++.+|+
T Consensus 3 e~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F~ 82 (134)
T d1jfja_ 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYK 82 (134)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence 57899999999999999999999999999999999999999999999999999999998765432 234567889999
Q ss_pred HhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 485 YFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 485 ~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
.+|.+++|.|+.+|+..++...+ .+.+.++|.++|.|+||.|+|+||+++|
T Consensus 83 ~~D~~~~g~i~~~el~~~~~~~~--~~~~~~~~~~~D~d~dG~is~~EF~~~~ 133 (134)
T d1jfja_ 83 LMDVDGDGKLTKEEVTSFFKKHG--IEKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHCCSSSSEEEHHHHHHHHTTTT--CHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred ccccccCCcccHHHHHHHHHhcC--cHHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence 99999999999999999998765 4678889999999999999999999986
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.81 E-value=5e-20 Score=160.03 Aligned_cols=134 Identities=25% Similarity=0.483 Sum_probs=116.6
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHh-cCCCCCCccchhhhHHHHhhhchh------hHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDA-ADVDNSGTIDYGEFIAATVHLNKL------EREEH 478 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~-~D~~~~g~I~~~eF~~~~~~~~~~------~~~~~ 478 (564)
.++++|..+|.+++|.|+.+||..+++.+|..++..++..++.. .+.+.+|.|+|++|...+...... ...+.
T Consensus 3 ~~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~ 82 (146)
T d1m45a_ 3 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTED 82 (146)
T ss_dssp CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHH
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHH
Confidence 47899999999999999999999999999999999999998864 456677899999999886543221 22467
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 479 LVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 479 l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
+..+|+.+|.+++|.|+.+||+.+|..+| ++++++.++|..+|.|+||.|+|+||++.+.+
T Consensus 83 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~ 145 (146)
T d1m45a_ 83 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 145 (146)
T ss_dssp HHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 89999999999999999999999999987 89999999999999999999999999988754
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.81 E-value=2.4e-20 Score=160.65 Aligned_cols=129 Identities=26% Similarity=0.445 Sum_probs=115.0
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch---hhHHHHHHH
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK---LEREEHLVA 481 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~---~~~~~~l~~ 481 (564)
..++++|..+|.+++|.|+.+||..+|+.+|.+++..++..+ +.+++|.|+|+||+.++..... ....+.+..
T Consensus 5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~ 80 (140)
T d1ggwa_ 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence 578999999999999999999999999999999998887755 5678899999999998764332 234567899
Q ss_pred HHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 482 AFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 482 ~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
+|+.+|.+++|+|+.+||+++|..+| +++++++++++.+|.+ ||.|+|+||+++|.
T Consensus 81 aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~ 138 (140)
T d1ggwa_ 81 GFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHH
T ss_pred HHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHh
Confidence 99999999999999999999998876 8999999999999988 99999999999875
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=1.3e-19 Score=160.90 Aligned_cols=142 Identities=29% Similarity=0.509 Sum_probs=121.8
Q ss_pred hhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh-
Q 008475 395 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL- 473 (564)
Q Consensus 395 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~- 473 (564)
|...|+++++.+++++|+.+|+|++|.|+.+||..++.....+ .++.+|..+|.+++|.|+|+||+..+......
T Consensus 6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~~----~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~ 81 (165)
T d1auib_ 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNP----LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG 81 (165)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTCT----THHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTC
T ss_pred HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccCCH----HHHHHHHHHccccchhhhhhhhhhhccccccch
Confidence 4568999999999999999999999999999999877654332 35779999999999999999999988776433
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC-C--CC----HHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEH-N--MT----DVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~-~--~~----~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.....+..+|+.+|.|++|.|+.+|+.++++.. + ++ +..+..+|..+|.|+||.|+++||+++|.+.
T Consensus 82 ~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~~ 155 (165)
T d1auib_ 82 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 155 (165)
T ss_dssp CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred hhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence 456779999999999999999999999998653 2 33 4557889999999999999999999999865
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=8.1e-19 Score=158.99 Aligned_cols=153 Identities=20% Similarity=0.284 Sum_probs=130.1
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCH-HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHH
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKD-TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLERE 476 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~-~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~ 476 (564)
.|+.+++..|.+.|... +++|.++..+|..++..++..... ..++.+|..+|.+++|.|+|+||+..+..+......
T Consensus 18 ~fs~~Ei~~l~~~F~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~ 95 (187)
T d1g8ia_ 18 YFTEKEVQQWYKGFIKD--CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLD 95 (187)
T ss_dssp SSCHHHHHHHHHHHHHH--CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHH
T ss_pred CCCHHHHHHHHHHHHHH--CCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchh
Confidence 57888988888888754 578999999999999988766554 445789999999999999999999998887777778
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhC----C----------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEH----N----------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV 542 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~----------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~ 542 (564)
+.++.+|+.||.|++|.|+.+|+..++... + ..++.++.+|..+|.|+||+|+|+||.+++.+-
T Consensus 96 e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~-- 173 (187)
T d1g8ia_ 96 EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD-- 173 (187)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHC--
T ss_pred hhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHC--
Confidence 889999999999999999999999988642 1 224678999999999999999999999999765
Q ss_pred CCChHHHHHHHhHHcc
Q 008475 543 GLGRRTMRNSLNMSMR 558 (564)
Q Consensus 543 ~~~~~~~~~~f~~~D~ 558 (564)
..+.+.|+.+|.
T Consensus 174 ----p~~~~~l~~~~~ 185 (187)
T d1g8ia_ 174 ----PSIVQALSLYDG 185 (187)
T ss_dssp ----HHHHHHHCCBTT
T ss_pred ----HHHHHHHHHhhc
Confidence 567888877763
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.77 E-value=1.6e-18 Score=156.18 Aligned_cols=142 Identities=25% Similarity=0.389 Sum_probs=123.8
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCC-HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLK-DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~-~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~ 475 (564)
..|+.++++.+.+.|.. .+++|.|+.+||..++..++.... ...++.+|..+|.+++|.|+|+||+..+........
T Consensus 16 t~fs~~ei~~l~~~F~~--~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~ 93 (181)
T d1bjfa_ 16 TDFTEHEIQEWYKGFLR--DCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 93 (181)
T ss_dssp SSCCHHHHHHHHHHHHH--HSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhch
Confidence 36888999989888854 467899999999999998775554 556789999999999999999999999888777777
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhC--------------CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEH--------------NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~--------------~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
++.++.+|+.+|.|++|+|+.+|+..++... .+.++.++.+|..+|.|+||.|||+||.+++.+.
T Consensus 94 ~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~ 172 (181)
T d1bjfa_ 94 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSD 172 (181)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence 8889999999999999999999999998752 1345678999999999999999999999999866
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.77 E-value=1.1e-18 Score=158.56 Aligned_cols=154 Identities=23% Similarity=0.319 Sum_probs=130.7
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCH-HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKD-TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~-~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~ 475 (564)
..|+..+++.+.+.|.. .+++|.|+..||..++..++..... ..++.+|..+|.+++|.|+|.||+..+..+.....
T Consensus 20 t~fs~~Ei~~l~~~F~~--~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~ 97 (190)
T d1fpwa_ 20 TYFDRREIQQWHKGFLR--DCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL 97 (190)
T ss_dssp CCSTHHHHHHHHHHHHH--HCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS
T ss_pred cCCCHHHHHHHHHHHHH--HCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCch
Confidence 36899999999999965 4578999999999999988755444 44688999999999999999999999887777677
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--------------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--------------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--------------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
++.++.+|+.||.|++|.|+.+|+..++.... ..++.++++|..+|.|+||.|+|+||.+++.+-
T Consensus 98 ~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~- 176 (190)
T d1fpwa_ 98 EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVD- 176 (190)
T ss_dssp THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSS-
T ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC-
Confidence 88899999999999999999999999886421 124678999999999999999999999998764
Q ss_pred CCCChHHHHHHHhHHcc
Q 008475 542 VGLGRRTMRNSLNMSMR 558 (564)
Q Consensus 542 ~~~~~~~~~~~f~~~D~ 558 (564)
..+.+.|..+|.
T Consensus 177 -----p~i~~~l~~~d~ 188 (190)
T d1fpwa_ 177 -----PSIIGALNLYDG 188 (190)
T ss_dssp -----TTHHHHHHHHHC
T ss_pred -----HHHHHHhhhhcc
Confidence 456778887763
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=3.4e-19 Score=153.28 Aligned_cols=130 Identities=23% Similarity=0.434 Sum_probs=113.2
Q ss_pred HhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCC--CCCCccchhhhHHHHhhhchh---hHHHHHHH
Q 008475 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADV--DNSGTIDYGEFIAATVHLNKL---EREEHLVA 481 (564)
Q Consensus 407 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~--~~~g~I~~~eF~~~~~~~~~~---~~~~~l~~ 481 (564)
++++|..+|.+++|.|+.+||..+|+.+|..++..++..++..++. +++|.|+|.+|...+...... ...+.+..
T Consensus 2 ~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~~ 81 (139)
T d1w7jb1 2 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLE 81 (139)
T ss_dssp HHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHH
T ss_pred HHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHHH
Confidence 6889999999999999999999999999999999999999988764 578999999998877543222 23456889
Q ss_pred HHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 482 AFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 482 ~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
+|+.+|.+++|+|+.+||++++..+| +++++++.++.. |.|+||.|+|+||++.|
T Consensus 82 aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l 138 (139)
T d1w7jb1 82 GFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKHI 138 (139)
T ss_dssp HHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred hhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence 99999999999999999999999988 899999999865 88999999999999875
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.76 E-value=2e-18 Score=156.64 Aligned_cols=135 Identities=24% Similarity=0.380 Sum_probs=114.6
Q ss_pred hHhhhhhcccCC-CCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTD-NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQ 484 (564)
Q Consensus 406 ~l~~~F~~~D~d-~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~ 484 (564)
.|+++|+.|+.+ ++|+|+.+||..++...+...+...++.+|..+|.+++|.|+|.||+..+..+.....++.++.+|+
T Consensus 22 ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~~~F~ 101 (189)
T d1jbaa_ 22 QLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFK 101 (189)
T ss_dssp HHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHHHHh
Confidence 344444444444 5899999999999998899899999999999999999999999999999887766666788999999
Q ss_pred HhCCCCCCceeHHHHHHHHHhC-----------------C-C-CHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 485 YFDKDGSGYITVDELQQACAEH-----------------N-M-TDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 485 ~~D~d~dG~I~~~e~~~~l~~~-----------------~-~-~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.||.|++|.|+.+|+..++..+ . + .++.++.+|..+|.|+||.|+|+||++++.+-
T Consensus 102 ~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~~ 176 (189)
T d1jbaa_ 102 IYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRD 176 (189)
T ss_dssp HHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTT
T ss_pred hhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence 9999999999999999877532 0 1 24567899999999999999999999999755
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.75 E-value=5.9e-18 Score=152.66 Aligned_cols=146 Identities=22% Similarity=0.403 Sum_probs=123.8
Q ss_pred hhhhhHHHHHhHhhhhhcccCC--CCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc-h
Q 008475 396 AESLSEEEIAGLKEMFKAMDTD--NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN-K 472 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-~ 472 (564)
...|+.+++..|+++|+.+|.+ ++|.|+.+||..++...+.... ..++.+|..+|.+++|.|+|+||+..+..+. .
T Consensus 8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~ 86 (183)
T d2zfda1 8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHPN 86 (183)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT
T ss_pred hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhcc
Confidence 4589999999999999999876 6999999999999987766654 4678999999999999999999998876654 3
Q ss_pred hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHh----CC--CCHHH----HHHHHHHhCCCCCcceeHHHHHHHHHcCCC
Q 008475 473 LEREEHLVAAFQYFDKDGSGYITVDELQQACAE----HN--MTDVL----LEDIIREVDQDNDGRIDYGEFVAMMQKGNV 542 (564)
Q Consensus 473 ~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~----~~--~~~~~----~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~ 542 (564)
...++.++.+|+.+|.|++|.|+.+|++.++.. .+ +++.. ++.+|..+|.|+||.|+|+||.+++...+.
T Consensus 87 ~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~ 166 (183)
T d2zfda1 87 APIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPS 166 (183)
T ss_dssp SCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSGG
T ss_pred CcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHCHH
Confidence 456778999999999999999999999998754 23 45444 566889999999999999999999987543
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.74 E-value=6.4e-18 Score=151.75 Aligned_cols=154 Identities=20% Similarity=0.321 Sum_probs=126.7
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCC-CHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTL-KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLE 474 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~-~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~ 474 (564)
...|+..+++.+++.|.. .+++|.|+.+||..++..++... ....++.+|..+|.+++|.|+|+||+..+..+....
T Consensus 7 ~t~ft~~ei~~l~~~F~~--~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~ 84 (178)
T d1s6ca_ 7 QTNFTKRELQVLYRGFKN--ECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT 84 (178)
T ss_dssp HSSCCHHHHHHHHHHHHH--HCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCC
T ss_pred cCCCCHHHHHHHHHHHHH--HCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccc
Confidence 347889999999888865 45689999999999999887655 445568999999999999999999999887777667
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC----C----------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEH----N----------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~----------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
..+.++.+|+.||.+++|.|+.+|+..++..+ + ..+..++.+|+.+|.|+||.|||+||.+++.+.
T Consensus 85 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~~ 164 (178)
T d1s6ca_ 85 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED 164 (178)
T ss_dssp HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSC
T ss_pred hHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHC
Confidence 78889999999999999999999998876542 1 224557889999999999999999999988754
Q ss_pred CCCCChHHHHHHHhHHc
Q 008475 541 NVGLGRRTMRNSLNMSM 557 (564)
Q Consensus 541 ~~~~~~~~~~~~f~~~D 557 (564)
.++.++++.|+
T Consensus 165 ------~~~~~~l~~~~ 175 (178)
T d1s6ca_ 165 ------DNIMRSLQLFQ 175 (178)
T ss_dssp ------CHHHHHHHHHH
T ss_pred ------HHHHHHhhhhc
Confidence 45566665553
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.74 E-value=3.6e-18 Score=156.59 Aligned_cols=143 Identities=20% Similarity=0.305 Sum_probs=120.9
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCC-CHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhh
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTL-KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLE 474 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~-~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~ 474 (564)
...|+.+++..+.+.|.. .+++|.|+.+||..++..++... ....++.+|..+|.+++|.|+|.||+..+..+....
T Consensus 19 ~t~f~~~ei~~l~~~F~~--~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~ 96 (201)
T d1omra_ 19 NTKFTEEELSSWYQSFLK--ECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK 96 (201)
T ss_dssp GCSSCHHHHHHHHHHHHH--HCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSC
T ss_pred hCCCCHHHHHHHHHHHHH--HCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccc
Confidence 346899999999998854 56789999999999999887644 455668999999999999999999999887776666
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--C--------------CHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--M--------------TDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~--------------~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
.++.++.+|+.||.|++|.|+.+|+..++.... + .+..++.+|..+|.|+||.|+|+||++.+.
T Consensus 97 ~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~ 176 (201)
T d1omra_ 97 TNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTL 176 (201)
T ss_dssp GGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 677899999999999999999999999886531 1 134578899999999999999999999886
Q ss_pred cC
Q 008475 539 KG 540 (564)
Q Consensus 539 ~~ 540 (564)
.-
T Consensus 177 ~~ 178 (201)
T d1omra_ 177 AN 178 (201)
T ss_dssp HC
T ss_pred HC
Confidence 54
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.72 E-value=2.6e-18 Score=155.30 Aligned_cols=142 Identities=18% Similarity=0.351 Sum_probs=117.6
Q ss_pred hhhHHHHHhHhhhhhc-ccCCCCCCCCHHHHHHHHHhhCC----CCCH-----------HHHHHHHHhcCCCCCCccchh
Q 008475 398 SLSEEEIAGLKEMFKA-MDTDNSGAITFDELKAGLRRYGS----TLKD-----------TEIRDLMDAADVDNSGTIDYG 461 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~-~D~d~~G~I~~~el~~~l~~~~~----~~~~-----------~~~~~~~~~~D~~~~g~I~~~ 461 (564)
.+|+.+.++++++|+. +|.|++|.|+.+||..++..++. .... ..+..++...|.+++|.|+++
T Consensus 1 ~lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~ 80 (185)
T d2sasa_ 1 GLNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWE 80 (185)
T ss_dssp CCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHH
T ss_pred CcCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeee
Confidence 3678889999999997 69999999999999999876531 1111 123446677899999999999
Q ss_pred hhHHHHhhhchh---------hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHH
Q 008475 462 EFIAATVHLNKL---------EREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGE 532 (564)
Q Consensus 462 eF~~~~~~~~~~---------~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~e 532 (564)
+|...+...... .....+..+|+.+|.|++|+|+.+||+.++..+|+++++++.+|..+|.|+||.|+|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~~~~~~~~f~~~D~d~dG~i~~~E 160 (185)
T d2sasa_ 81 EYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNR 160 (185)
T ss_dssp HHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHH
T ss_pred HhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCCHHHHHHHHHHcCCCCCCCCcHHH
Confidence 999876543211 23456889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc
Q 008475 533 FVAMMQK 539 (564)
Q Consensus 533 F~~~~~~ 539 (564)
|..++..
T Consensus 161 F~~~~~~ 167 (185)
T d2sasa_ 161 YKELYYR 167 (185)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988754
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=99.72 E-value=2.3e-17 Score=147.46 Aligned_cols=138 Identities=22% Similarity=0.278 Sum_probs=111.7
Q ss_pred HHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhC----CCCC-HHH----HHHHHHh--cCCCCCCccchhhhHHHHhh
Q 008475 401 EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG----STLK-DTE----IRDLMDA--ADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 401 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~----~~~~-~~~----~~~~~~~--~D~~~~g~I~~~eF~~~~~~ 469 (564)
+.+.++++.+|+.+|.|++|.|+.+||..++..++ .... ... ....+.. .+.+++|.|+++||+..+..
T Consensus 2 ~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~ 81 (174)
T d2scpa_ 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE 81 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHh
Confidence 45678899999999999999999999999987653 1222 111 1223332 26778899999999988765
Q ss_pred hchh-----hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 470 LNKL-----EREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 470 ~~~~-----~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
.... .....+..+|+.+|.|++|.|+.+||+.++..++++.+++..+|..+|.|+||.|+++||+.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~ 155 (174)
T d2scpa_ 82 MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155 (174)
T ss_dssp HTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCGGGHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred hhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhhhHHHHHHHhhcCCCCCCcEeHHHHHHHHH
Confidence 4222 23456889999999999999999999999999999999999999999999999999999999875
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=99.71 E-value=5.3e-17 Score=147.15 Aligned_cols=139 Identities=27% Similarity=0.347 Sum_probs=110.2
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHH-----HhhCCCCCHHHHHH-----HHHhcCCCCCCccchhhhHHHHhh
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGL-----RRYGSTLKDTEIRD-----LMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l-----~~~~~~~~~~~~~~-----~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
.++++++++.+|+.+|.|++|.|+.+||..++ +.++..++..+... .+...+....+.|++++|...+..
T Consensus 9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~ 88 (189)
T d1qv0a_ 9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ 88 (189)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHH
Confidence 57888999999999999999999999998755 34566655555433 344556778889999999887654
Q ss_pred hchh-----------hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHH
Q 008475 470 LNKL-----------EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAM 536 (564)
Q Consensus 470 ~~~~-----------~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~ 536 (564)
.... .....+..+|+.+|.|++|+|+.+||+.++..+| +++++++.+|+.+|.|+||.|+|+||+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 168 (189)
T d1qv0a_ 89 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ 168 (189)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 3211 1235677899999999999999999999999876 89999999999999999999999999987
Q ss_pred HH
Q 008475 537 MQ 538 (564)
Q Consensus 537 ~~ 538 (564)
+.
T Consensus 169 ~~ 170 (189)
T d1qv0a_ 169 HL 170 (189)
T ss_dssp HH
T ss_pred HH
Confidence 74
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=4.6e-17 Score=145.87 Aligned_cols=149 Identities=16% Similarity=0.300 Sum_probs=117.1
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCC--------CCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCC-CCCccchhhhHHHH
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGA--------ITFDELKAGLRRYGSTLKDTEIRDLMDAADVD-NSGTIDYGEFIAAT 467 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~--------I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~ 467 (564)
..|+++++..+++.|..++.+++|. ++.++|..+.. +..++ -.+++|..+|.+ ++|.|+|+||+.++
T Consensus 9 T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~~-l~~~~---~~~rif~~fd~~~~~g~I~f~EFv~~l 84 (180)
T d1xo5a_ 9 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPE-LKANP---FKERICRVFSTSPAKDSLSFEDFLDLL 84 (180)
T ss_dssp CCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSHH-HHTCT---THHHHHHHHCCSTTCCEECHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCcc-cccCh---HHHHHHHhccCCCCCCcCcHHHHHHHH
Confidence 4789999999999999998888765 55555554332 22222 247899999987 79999999999988
Q ss_pred hhhc-hhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC-------CCCHH----HHHHHHHHhCCCCCcceeHHHHHH
Q 008475 468 VHLN-KLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH-------NMTDV----LLEDIIREVDQDNDGRIDYGEFVA 535 (564)
Q Consensus 468 ~~~~-~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~-------~~~~~----~~~~~~~~~d~d~dg~I~~~eF~~ 535 (564)
..+. ....++.++.+|+.||.|++|+|+.+|+..++..+ .++++ .++.+|.++|.|+||.|||+||.+
T Consensus 85 ~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~ 164 (180)
T d1xo5a_ 85 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 164 (180)
T ss_dssp HHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred HHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 7764 44667889999999999999999999999998763 14443 366689999999999999999999
Q ss_pred HHHcCCCCCChHHHHHHHhH
Q 008475 536 MMQKGNVGLGRRTMRNSLNM 555 (564)
Q Consensus 536 ~~~~~~~~~~~~~~~~~f~~ 555 (564)
++.+- -++.+.|+.
T Consensus 165 ~~~~~------P~~~~~f~i 178 (180)
T d1xo5a_ 165 VISRS------PDFASSFKI 178 (180)
T ss_dssp HHHHC------HHHHHHHHH
T ss_pred HHHhC------HHHHhhCee
Confidence 99865 256666653
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.69 E-value=1.1e-16 Score=143.05 Aligned_cols=138 Identities=20% Similarity=0.284 Sum_probs=114.1
Q ss_pred HHHhHhhhhhcccCCCCCCCCHHHHHHHHHhh----CCCCCHHH-----------HHHHHHhcCCCCCCccchhhhHHHH
Q 008475 403 EIAGLKEMFKAMDTDNSGAITFDELKAGLRRY----GSTLKDTE-----------IRDLMDAADVDNSGTIDYGEFIAAT 467 (564)
Q Consensus 403 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~----~~~~~~~~-----------~~~~~~~~D~~~~g~I~~~eF~~~~ 467 (564)
..++|+++|+.+|.|++|+|+.+||+.++..+ +..+...+ +..++...|.+++|.|++.++...+
T Consensus 5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (176)
T d1nyaa_ 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 34568999999999999999999999999765 22333222 2445667789999999999998765
Q ss_pred hhhch--------hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 468 VHLNK--------LEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 468 ~~~~~--------~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
..... ......+..+|..+|.|++|.|+.+||++++..+|+++++++.+|+.+|.|+||.|+|+||+.++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 164 (176)
T d1nyaa_ 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164 (176)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 43321 1234567889999999999999999999999999999999999999999999999999999999976
Q ss_pred C
Q 008475 540 G 540 (564)
Q Consensus 540 ~ 540 (564)
.
T Consensus 165 ~ 165 (176)
T d1nyaa_ 165 F 165 (176)
T ss_dssp C
T ss_pred H
Confidence 5
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=99.66 E-value=3.2e-16 Score=141.62 Aligned_cols=139 Identities=24% Similarity=0.287 Sum_probs=110.9
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHh-----hCCCCCHHHHHHH-----HHhcCCCCCCccchhhhHHHHhh
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR-----YGSTLKDTEIRDL-----MDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-----~~~~~~~~~~~~~-----~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
++.++++++++|+.+|.|++|.|+.+||..++.. ++..++..++... +.......++.+++.+|+..+..
T Consensus 7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (187)
T d1uhka1 7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK 86 (187)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence 4777889999999999999999999999876653 4555555443332 23344556678999999877654
Q ss_pred hchhh-----------HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHH
Q 008475 470 LNKLE-----------REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAM 536 (564)
Q Consensus 470 ~~~~~-----------~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~ 536 (564)
..... ....+..+|+.+|.|++|.|+.+||+.++..+| +++++++.+|+.+|.|+||.|+|+||++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 166 (187)
T d1uhka1 87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ 166 (187)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHH
Confidence 32221 234578899999999999999999999998876 78999999999999999999999999987
Q ss_pred HH
Q 008475 537 MQ 538 (564)
Q Consensus 537 ~~ 538 (564)
+.
T Consensus 167 ~~ 168 (187)
T d1uhka1 167 HL 168 (187)
T ss_dssp HH
T ss_pred HH
Confidence 74
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=99.66 E-value=9.2e-17 Score=158.24 Aligned_cols=161 Identities=21% Similarity=0.388 Sum_probs=106.6
Q ss_pred hhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhH
Q 008475 396 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER 475 (564)
Q Consensus 396 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~ 475 (564)
...++.++...++++|..+|.|++|.|+.+||..+|..++..++..++..+|..+|.+++|.|+|.||...+.....
T Consensus 113 ~~~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~--- 189 (321)
T d1ij5a_ 113 KPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAA--- 189 (321)
T ss_dssp CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHT---
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhh---
Confidence 44677888889999999999999999999999999999999999999999999999999999999999765532211
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHH-------------------------------HHHHHHHHhCCCC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDV-------------------------------LLEDIIREVDQDN 524 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~-------------------------------~~~~~~~~~d~d~ 524 (564)
+..+|+.+|.+++|.++..++...+...+.... .+..+|..+|.|+
T Consensus 190 ---~~~~F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~ 266 (321)
T d1ij5a_ 190 ---LVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDK 266 (321)
T ss_dssp ---SCCCHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSS
T ss_pred ---hhHHHHHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCC
Confidence 123344445555555555554444433321100 0122344455555
Q ss_pred CcceeHHHHHHHHHcCCC-CCChHHHHHHHhHHccCCCC
Q 008475 525 DGRIDYGEFVAMMQKGNV-GLGRRTMRNSLNMSMRDAPG 562 (564)
Q Consensus 525 dg~I~~~eF~~~~~~~~~-~~~~~~~~~~f~~~D~~~~g 562 (564)
+|.|+.+||..++...+. .++.+.+..+|+.+|.|+||
T Consensus 267 ~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG 305 (321)
T d1ij5a_ 267 SGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSK 305 (321)
T ss_dssp CSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCS
T ss_pred CCCCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCC
Confidence 555555555555554433 23444555555555555555
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.66 E-value=2.3e-16 Score=127.84 Aligned_cols=99 Identities=28% Similarity=0.465 Sum_probs=85.0
Q ss_pred CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---C--CCHH
Q 008475 437 TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---N--MTDV 511 (564)
Q Consensus 437 ~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~--~~~~ 511 (564)
-++.+++.+++..+|. +|.|+|+||+.++.. ....++.++.+|+.||+|++|+|+.+||+.+|+.+ | ++++
T Consensus 5 ~l~~~di~~~~~~~~~--~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~ 80 (109)
T d5pala_ 5 VLKADDINKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDT 80 (109)
T ss_dssp TSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHH
T ss_pred HccHHHHHHHHHhcCC--CCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHH
Confidence 3567888889988864 578999999987642 23356789999999999999999999999999764 3 7899
Q ss_pred HHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 512 LLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 512 ~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
+++++|+.+|.|+||.|+|+||+++|.+
T Consensus 81 e~~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d5pala_ 81 ETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 9999999999999999999999999874
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.64 E-value=3.3e-16 Score=126.97 Aligned_cols=98 Identities=26% Similarity=0.456 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---C--CCHHH
Q 008475 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---N--MTDVL 512 (564)
Q Consensus 438 ~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~--~~~~~ 512 (564)
++.+++..++..+| ++|.|+|.||+.++... ....+.++.+|+.+|.|++|+|+.+||+.++..+ | +++++
T Consensus 6 l~~eeI~~~~~~~d--~dG~idf~EF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~e 81 (109)
T d1pvaa_ 6 LKADDIKKALDAVK--AEGSFNHKKFFALVGLK--AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAE 81 (109)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT--TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHH
T ss_pred CCHHHHHHHHHhcC--CCCCCcHHHHHHHHHHc--cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHH
Confidence 46788888888775 56789999999877532 2345678899999999999999999999999765 3 78999
Q ss_pred HHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 513 LEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 513 ~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
++++|..+|.|+||.|+|+||+.+|.+
T Consensus 82 v~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 82 TKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence 999999999999999999999999864
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.55 E-value=9.8e-15 Score=117.77 Aligned_cols=98 Identities=29% Similarity=0.429 Sum_probs=85.1
Q ss_pred CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC-----CCHH
Q 008475 437 TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN-----MTDV 511 (564)
Q Consensus 437 ~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~-----~~~~ 511 (564)
.++++++..++..++.+ |.|+|.||+..+.. . ....+.++.+|+.+|.+++|+|+.+||+.++..++ ++++
T Consensus 4 gls~~di~~~~~~~~~~--gsi~~~eF~~~~~l-~-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~ 79 (107)
T d2pvba_ 4 GLKDADVAAALAACSAA--DSFKHKEFFAKVGL-A-SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDA 79 (107)
T ss_dssp TSCHHHHHHHHHHTCST--TCCCHHHHHHHHTG-G-GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHH
T ss_pred CCCHHHHHHHHHhccCC--CCcCHHHHHHHHhc-c-cCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHH
Confidence 56788999999998765 56999999987652 2 23466799999999999999999999999998763 7899
Q ss_pred HHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 512 LLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 512 ~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
+++++|+.+|.|+||.|+|+||+.+|.
T Consensus 80 ~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 80 ETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 999999999999999999999999885
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.55 E-value=1.6e-14 Score=117.13 Aligned_cols=98 Identities=22% Similarity=0.385 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC-----CCHHH
Q 008475 438 LKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN-----MTDVL 512 (564)
Q Consensus 438 ~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~-----~~~~~ 512 (564)
++.+++..++..++. +|.|+|+||+.++... ....+.++.+|+.+|+|++|+|+.+||+.+++.++ +++++
T Consensus 6 ~~~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e 81 (109)
T d1rwya_ 6 LSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKE 81 (109)
T ss_dssp SCHHHHHHHHHTTCS--TTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHH
T ss_pred cCHHHHHHHHHhccc--CCCcCHHHHHHHHccc--cCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHH
Confidence 467888888888754 4789999998877532 23466788999999999999999999999998653 78999
Q ss_pred HHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 513 LEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 513 ~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
++.+|+.+|.|+||+|+|+||+++|.+
T Consensus 82 ~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 82 TKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 999999999999999999999999874
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.52 E-value=3.3e-14 Score=122.56 Aligned_cols=122 Identities=22% Similarity=0.260 Sum_probs=108.1
Q ss_pred HHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHHH
Q 008475 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDIIR 518 (564)
Q Consensus 442 ~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~~ 518 (564)
+++.+|..+|.+++|.|+++||..++...........+..+|+.+|.+++|.|+.+||..++.... -..+.+..+|.
T Consensus 10 ~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~ 89 (146)
T d1exra_ 10 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFK 89 (146)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHHHH
Confidence 467789999999999999999998887666666678889999999999999999999999875432 13567889999
Q ss_pred HhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 519 EVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 519 ~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+|.|++|.|+.+||...+...+..++.+.+.++|+.+|.|+||.
T Consensus 90 ~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~ 134 (146)
T d1exra_ 90 VFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 134 (146)
T ss_dssp HHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSS
T ss_pred HhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCe
Confidence 999999999999999999999988889999999999999999995
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.50 E-value=4.6e-14 Score=119.62 Aligned_cols=117 Identities=21% Similarity=0.365 Sum_probs=101.8
Q ss_pred HHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---C--CHHHHHHHH
Q 008475 443 IRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---M--TDVLLEDII 517 (564)
Q Consensus 443 ~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~--~~~~~~~~~ 517 (564)
++.+|..+|.|++|.|+++||..++..+........+..+|+.+|.+++|.|+.+||..++.... . ....+..+|
T Consensus 2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F 81 (134)
T d1jfja_ 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccc
Confidence 46899999999999999999999888777777788899999999999999999999999886542 1 234578899
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|.+++|.|+.+||..++... ..+.+.++|+++|.||||.
T Consensus 82 ~~~D~~~~g~i~~~el~~~~~~~----~~~~~~~~~~~~D~d~dG~ 123 (134)
T d1jfja_ 82 KLMDVDGDGKLTKEEVTSFFKKH----GIEKVAEQVMKADANGDGY 123 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTT----TCHHHHHHHHHHHCSSSSE
T ss_pred cccccccCCcccHHHHHHHHHhc----CcHHHHHHHHHHCCCCCCC
Confidence 99999999999999999998754 3467889999999999994
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=7.8e-14 Score=119.38 Aligned_cols=124 Identities=22% Similarity=0.348 Sum_probs=110.8
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDI 516 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~ 516 (564)
.++++++|..+|.+++|.|++.||..++...........+...+..+|.+++|.|+.+||..++.... -..+++..+
T Consensus 5 ~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~~ 84 (141)
T d2obha1 5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKA 84 (141)
T ss_dssp HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHHHHHH
Confidence 45789999999999999999999998887776666778888999999999999999999998875432 235668899
Q ss_pred HHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 517 IREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 517 ~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
|..+|.+++|.|+..||..++...+..++...+.++|+.+|.|+||+
T Consensus 85 f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~ 131 (141)
T d2obha1 85 FKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGE 131 (141)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSS
T ss_pred HHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999998999999999999999999995
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.49 E-value=5.1e-14 Score=113.79 Aligned_cols=101 Identities=22% Similarity=0.385 Sum_probs=84.7
Q ss_pred hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC-----C
Q 008475 434 YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN-----M 508 (564)
Q Consensus 434 ~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~-----~ 508 (564)
++..++.+++..++..++. +|.|+|++|...+.. . ....+.++++|+.||+|++|+|+.+||+.++..++ +
T Consensus 2 ~~d~ls~~dI~~~l~~~~~--~~s~~~~~F~~~~~~-~-~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l 77 (108)
T d1rroa_ 2 ITDILSAEDIAAALQECQD--PDTFEPQKFFQTSGL-S-KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHSG-G-GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred hhhhCCHHHHHHHHHhccc--CCCccHHHHHHHHcc-C-cCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCC
Confidence 3456778899999888754 467999999765532 2 23456789999999999999999999999998752 7
Q ss_pred CHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 509 TDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 509 ~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
++++++.+|+.+|.|+||.|+|+||+++|.
T Consensus 78 ~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 78 TESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 899999999999999999999999999885
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=2.4e-13 Score=119.00 Aligned_cols=121 Identities=21% Similarity=0.322 Sum_probs=102.3
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQY 485 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~ 485 (564)
.++.++..+|.|++|.|+.+||..++..+ ..+..+|..+|.+++|+|+.+||..++...+.......+..+++.
T Consensus 41 ~~~~li~~~D~~~~G~i~~~EF~~l~~~~------~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~ 114 (165)
T d1k94a_ 41 TCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114 (165)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHhhcc------chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 35666777899999999999999988764 678899999999999999999999988877665567788899999
Q ss_pred hCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHHHH
Q 008475 486 FDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRI--DYGEFVAMMQ 538 (564)
Q Consensus 486 ~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I--~~~eF~~~~~ 538 (564)
+|. +|.|+.+||..++.. -+.+.+.|+.+|.+++|.| +++||+.++.
T Consensus 115 ~d~--~g~i~~~eFi~~~~~----l~~~~~~F~~~D~d~~G~i~l~~~ef~~~~~ 163 (165)
T d1k94a_ 115 YSK--NGRIFFDDYVACCVK----LRALTDFFRKRDHLQQGSANFIYDDFLQGTM 163 (165)
T ss_dssp HCB--TTBCBHHHHHHHHHH----HHHHHHHHHTTCTTCCSEEEEEHHHHHHHHH
T ss_pred cCC--CCcCcHHHHHHHHHH----HHHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 975 589999999988853 3567889999999999977 7899998764
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.44 E-value=1.4e-13 Score=125.52 Aligned_cols=144 Identities=17% Similarity=0.158 Sum_probs=115.4
Q ss_pred CCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhc-CCCCCCccchhhhHHHHhhhchh-hHHHHHHHHHHHhCCCCCCcee
Q 008475 418 NSGAITFDELKAGLRRYGSTLKDTEIRDLMDAA-DVDNSGTIDYGEFIAATVHLNKL-EREEHLVAAFQYFDKDGSGYIT 495 (564)
Q Consensus 418 ~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~-D~~~~g~I~~~eF~~~~~~~~~~-~~~~~l~~~F~~~D~d~dG~I~ 495 (564)
..|.|+.+++..+... ..++..++..+++.+ +.+++|.|+++||..++..+... .....+..+|..+|.+++|.|+
T Consensus 4 ~~~~l~~e~l~~l~~~--t~f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~ 81 (201)
T d1omra_ 4 KSGALSKEILEELQLN--TKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81 (201)
T ss_dssp SSCTHHHHHHHHHGGG--CSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEE
T ss_pred ccCCCCHHHHHHHHHh--CCCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEe
Confidence 5688999999887764 446899999888886 66789999999999987766443 3345567899999999999999
Q ss_pred HHHHHHHHHhC--CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCC--------------ChHHHHHHHhHHccC
Q 008475 496 VDELQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGL--------------GRRTMRNSLNMSMRD 559 (564)
Q Consensus 496 ~~e~~~~l~~~--~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~--------------~~~~~~~~f~~~D~~ 559 (564)
..||..++..+ +..++.+..+|..+|.|++|.|+++||...+....... ..+....+|+++|.|
T Consensus 82 f~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d 161 (201)
T d1omra_ 82 FKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKK 161 (201)
T ss_dssp HHHHHHHHHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCC
T ss_pred ehhHHHHHHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCC
Confidence 99999887654 35567789999999999999999999998887532111 123457899999999
Q ss_pred CCCC
Q 008475 560 APGS 563 (564)
Q Consensus 560 ~~g~ 563 (564)
|||.
T Consensus 162 ~dG~ 165 (201)
T d1omra_ 162 DDDK 165 (201)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 9995
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.43 E-value=2.9e-13 Score=121.08 Aligned_cols=120 Identities=25% Similarity=0.297 Sum_probs=108.5
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIRE 519 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~ 519 (564)
.++++.+|..+|.+++|.|+.+||..++..+........+..+|+.+|.|++|.|+.++|...+.. ...+.+.|..
T Consensus 17 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~----~~~~~~~F~~ 92 (182)
T d1y1xa_ 17 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF----ILSMREGFRK 92 (182)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhcccccccccccccccccccccc----ccccccchhc
Confidence 456899999999999999999999998877666666788999999999999999999999988753 4677889999
Q ss_pred hCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 520 VDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 520 ~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+|.+++|.|+.+||.+++...+..++.+.+..+|+.+|.|+||.
T Consensus 93 ~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~ 136 (182)
T d1y1xa_ 93 RDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGS 136 (182)
T ss_dssp HCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSS
T ss_pred cccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCC
Confidence 99999999999999999999888889999999999999999995
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.43 E-value=4.6e-13 Score=115.05 Aligned_cols=124 Identities=11% Similarity=0.104 Sum_probs=106.1
Q ss_pred CHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCC--CCCceeHHHHHHHHHhCC-----CCHH
Q 008475 439 KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKD--GSGYITVDELQQACAEHN-----MTDV 511 (564)
Q Consensus 439 ~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d--~dG~I~~~e~~~~l~~~~-----~~~~ 511 (564)
+.++++++|..+|.+++|.|+.+||..++..+....+...+..++..+|.+ ++|.|+.+||..++.... -..+
T Consensus 2 ~~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 81 (145)
T d2mysc_ 2 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFE 81 (145)
T ss_pred CHHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHH
Confidence 457899999999999999999999999887776666677788888877654 689999999999886531 2456
Q ss_pred HHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 512 LLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 512 ~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
++.++|..+|.+++|.|+.+||..++...+..++.+++..+++. |.|+||.
T Consensus 82 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dG~ 132 (145)
T d2mysc_ 82 DFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGC 132 (145)
T ss_pred HHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCCCe
Confidence 78899999999999999999999999999888999999999975 8899984
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.41 E-value=7.7e-13 Score=113.80 Aligned_cols=120 Identities=19% Similarity=0.248 Sum_probs=106.6
Q ss_pred HHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHHHH
Q 008475 443 IRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDIIRE 519 (564)
Q Consensus 443 ~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~~~ 519 (564)
++.+|..+|.+++|.|+++||..++...........+...+..++.++++.++.+++..++.... -+.+.+..+|+.
T Consensus 12 l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aF~~ 91 (146)
T d1lkja_ 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKV 91 (146)
T ss_dssp HHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 56679999999999999999998887766666677888899999999999999999998886533 345678999999
Q ss_pred hCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 520 VDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 520 ~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+|.|++|.|+.+||..++...+..++.+.+.++|+.+| ||||+
T Consensus 92 ~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~ 134 (146)
T d1lkja_ 92 FDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGE 134 (146)
T ss_dssp HCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSE
T ss_pred hCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCe
Confidence 99999999999999999999999999999999999999 99994
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.41 E-value=4.6e-13 Score=120.71 Aligned_cols=143 Identities=16% Similarity=0.258 Sum_probs=113.5
Q ss_pred CCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhc-CCCCCCccchhhhHHHHhhhchh-hHHHHHHHHHHHhCCCCCCceeH
Q 008475 419 SGAITFDELKAGLRRYGSTLKDTEIRDLMDAA-DVDNSGTIDYGEFIAATVHLNKL-EREEHLVAAFQYFDKDGSGYITV 496 (564)
Q Consensus 419 ~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~-D~~~~g~I~~~eF~~~~~~~~~~-~~~~~l~~~F~~~D~d~dG~I~~ 496 (564)
...++.+++..+.+. ..++..+++.+++.+ +.+.+|.|+..||..++..+... .....+..+|+.+|.+++|.|+.
T Consensus 5 ~S~l~~e~l~~l~~~--t~fs~~Ei~~l~~~F~~~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~ 82 (190)
T d1fpwa_ 5 TSKLSKDDLTCLKQS--TYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHF 82 (190)
T ss_dssp SCCSTTHHHHHHTTT--CCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECH
T ss_pred cCCCCHHHHHHHHHH--cCCCHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccH
Confidence 445788887776643 346788999888887 55679999999999887655432 23445678999999999999999
Q ss_pred HHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC--------C----CChHHHHHHHhHHccCCCC
Q 008475 497 DELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV--------G----LGRRTMRNSLNMSMRDAPG 562 (564)
Q Consensus 497 ~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~--------~----~~~~~~~~~f~~~D~~~~g 562 (564)
.||..++..+. ..++.++.+|..+|.|++|.|+++||..++..... . .....+.++|+++|.|+||
T Consensus 83 ~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG 162 (190)
T d1fpwa_ 83 EEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDG 162 (190)
T ss_dssp HHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSS
T ss_pred HHHHHHHHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence 99999987653 67888999999999999999999999998865411 1 1135678999999999999
Q ss_pred C
Q 008475 563 S 563 (564)
Q Consensus 563 ~ 563 (564)
+
T Consensus 163 ~ 163 (190)
T d1fpwa_ 163 Y 163 (190)
T ss_dssp E
T ss_pred c
Confidence 4
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.41 E-value=3.3e-13 Score=102.84 Aligned_cols=77 Identities=30% Similarity=0.518 Sum_probs=71.6
Q ss_pred HHhhhhhhHHHHHhHhhhhhcccCCC-CCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 393 RVIAESLSEEEIAGLKEMFKAMDTDN-SGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 393 ~~~~~~~~~~~~~~l~~~F~~~D~d~-~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
+.....++++++..++++|..+|.++ +|.|+..||..+++.+|.+++..+++.++..+|.+++|.|+|+||+.++..
T Consensus 3 k~~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 34466899999999999999999995 799999999999999999999999999999999999999999999998763
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.40 E-value=7.6e-13 Score=115.97 Aligned_cols=122 Identities=23% Similarity=0.325 Sum_probs=106.7
Q ss_pred HHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC------CCCHHHHHH
Q 008475 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH------NMTDVLLED 515 (564)
Q Consensus 442 ~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~------~~~~~~~~~ 515 (564)
+++.+|..+|.+++|.|+++||..++...........+..+|..+|.+++|.++..|+...+... +...+.+.+
T Consensus 21 el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 100 (162)
T d1topa_ 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAN 100 (162)
T ss_dssp HHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcccCcHHHHHH
Confidence 47789999999999999999998887776666677889999999999999999999987665321 134556788
Q ss_pred HHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 516 IIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 516 ~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+|..+|.|++|.|+.+||..++...+.....+++..+|+.+|.|+||.
T Consensus 101 aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~ 148 (162)
T d1topa_ 101 CFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGR 148 (162)
T ss_dssp HHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSS
T ss_pred HHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 999999999999999999999999888888999999999999999994
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.40 E-value=6.1e-13 Score=119.40 Aligned_cols=121 Identities=21% Similarity=0.232 Sum_probs=102.2
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQY 485 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~ 485 (564)
.+..++..+|.|++|.|+.+||..++..+ ..+..+|..+|.+++|.|+.+|+..++.........+ +..++..
T Consensus 62 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~-~~~~~~~ 134 (186)
T d1df0a1 62 TCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQ-LHQVIVA 134 (186)
T ss_dssp HHHHHHHHHCCSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHH-HHHHHHH
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHhH------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHH-HHHHHHH
Confidence 45777888999999999999999888753 5688999999999999999999999887654443333 4567778
Q ss_pred hCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHHH
Q 008475 486 FDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRI--DYGEFVAMM 537 (564)
Q Consensus 486 ~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I--~~~eF~~~~ 537 (564)
+|.|++|.|+.+||..++. .-+.+..+|..+|.|++|.| +|.||+.+.
T Consensus 135 ~d~d~dg~I~f~eFi~~~~----~l~~~~~~F~~~D~~~~G~i~l~~~ef~~~~ 184 (186)
T d1df0a1 135 RFADDELIIDFDNFVRCLV----RLEILFKIFKQLDPENTGTIQLDLISWLSFS 184 (186)
T ss_dssp HHCCSTTEECHHHHHHHHH----HHHHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred HHcCCCCeEeHHHHHHHHH----HHHHHHHHHHHhCCCCCCcEEecHHHHHHHh
Confidence 8999999999999999884 45788899999999999987 899999864
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.40 E-value=9.8e-13 Score=117.46 Aligned_cols=122 Identities=27% Similarity=0.474 Sum_probs=103.5
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQY 485 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~ 485 (564)
.+..+|..+|.+++|.|+.+||..++... ..+...|..+|.+++|.|+.+||..++.........+.+..+++.
T Consensus 57 ~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~ 130 (181)
T d1hqva_ 57 TVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRK 130 (181)
T ss_dssp HHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHH
T ss_pred HHHHHhhccccccccchhhhHHHhhhhhc------cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHH
Confidence 45667778999999999999999988753 567889999999999999999999888776655567788899999
Q ss_pred hCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHHH
Q 008475 486 FDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRI--DYGEFVAMM 537 (564)
Q Consensus 486 ~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I--~~~eF~~~~ 537 (564)
+|.+++|.|+.+||..++. .-+.+.++|+.+|.++||.| +++||+.++
T Consensus 131 ~d~~~dg~Is~~eF~~~~~----~l~~l~~~F~~~D~~~dG~i~~~~~ef~~~~ 180 (181)
T d1hqva_ 131 FDRQGRGQIAFDDFIQGCI----VLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 180 (181)
T ss_dssp HCSSCSSCBCHHHHHHHHH----HHHHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred hCCCCCCcCcHHHHHHHHH----HHHHHHHHHHHhCCCCCCCEEecHHHHHHHh
Confidence 9999999999999998874 34567889999999999965 799999875
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.39 E-value=4.7e-13 Score=100.25 Aligned_cols=66 Identities=36% Similarity=0.746 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
..++.++.+|+.||++++|+|+.+||+.+|+.+| +++++++++|..+|.|++|+|+|+||+++|..
T Consensus 6 ~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 6 KSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp CCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 3466799999999999999999999999999988 88999999999999999999999999999864
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.37 E-value=2.9e-13 Score=102.26 Aligned_cols=73 Identities=38% Similarity=0.640 Sum_probs=69.4
Q ss_pred hhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 397 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 397 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
.+++++++..++++|..+|.|++|+|+..||..+|+.+|..++..++..++..+|.+++|.|+|+||+.++..
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999999999999988753
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.37 E-value=1.4e-12 Score=117.33 Aligned_cols=126 Identities=18% Similarity=0.177 Sum_probs=101.7
Q ss_pred CCHHHHHHHHHhcCCC-CCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC--CCCHHHHH
Q 008475 438 LKDTEIRDLMDAADVD-NSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLLE 514 (564)
Q Consensus 438 ~~~~~~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~--~~~~~~~~ 514 (564)
....+++.+++.+..+ ++|.|+++||..++...........+..+|+.+|.|++|.|+..||..++... +..++.+.
T Consensus 18 ~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~ 97 (189)
T d1jbaa_ 18 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK 97 (189)
T ss_dssp HHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHH
T ss_pred cCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHH
Confidence 3456788888887654 58999999999887655555567778999999999999999999999998764 36678899
Q ss_pred HHHHHhCCCCCcceeHHHHHHHHHcCC----------------CCCC-hHHHHHHHhHHccCCCCC
Q 008475 515 DIIREVDQDNDGRIDYGEFVAMMQKGN----------------VGLG-RRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 515 ~~~~~~d~d~dg~I~~~eF~~~~~~~~----------------~~~~-~~~~~~~f~~~D~~~~g~ 563 (564)
.+|..+|.|++|.|+++||..++.... .... .+.+.++|+.+|.|+||+
T Consensus 98 ~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~ 163 (189)
T d1jbaa_ 98 WTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQ 163 (189)
T ss_dssp HHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSC
T ss_pred HHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCc
Confidence 999999999999999999988765320 0112 345678999999999995
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=1.6e-12 Score=114.98 Aligned_cols=122 Identities=24% Similarity=0.339 Sum_probs=104.0
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHH
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQ 484 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~ 484 (564)
+.++.++..+|.|++|.|+.+||..++... ..+...|+.+|.+++|.|+.+|+..++..+......+.+..+|+
T Consensus 47 ~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~ 120 (172)
T d1juoa_ 47 ETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK 120 (172)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCceehHHHHHHHHhh------hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 345667888999999999999999988753 55778999999999999999999998877766566778999999
Q ss_pred HhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHHHH
Q 008475 485 YFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRI--DYGEFVAMMQ 538 (564)
Q Consensus 485 ~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I--~~~eF~~~~~ 538 (564)
.+| .+|.|+.++|..++.. -+.+.++|+.+|.|++|.| +|+||+.++.
T Consensus 121 ~~d--~~g~i~~~eF~~~~~~----~~~~~~~f~~~D~d~~G~Itl~~~eFl~~~l 170 (172)
T d1juoa_ 121 RYS--TNGKITFDDYIACCVK----LRALTDSFRRRDTAQQGVVNFPYDDFIQCVM 170 (172)
T ss_dssp HTC--SSSSEEHHHHHHHHHH----HHHHHHHHHHTCTTCCSEEEEEHHHHHHHHT
T ss_pred HHH--hcCCcCHHHHHHHHHH----HHHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 996 4688999999998854 3578889999999999987 8899998764
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.37 E-value=3.1e-13 Score=100.88 Aligned_cols=71 Identities=38% Similarity=0.671 Sum_probs=68.0
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
+++++++..++++|..+|.+++|+|+..||..++..+|..++.+++..++..+|.+++|.|+|+||+.++.
T Consensus 1 qLs~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~ 71 (73)
T d2pq3a1 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71 (73)
T ss_dssp CCCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 36889999999999999999999999999999999999999999999999999999999999999998775
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.36 E-value=2.7e-12 Score=113.64 Aligned_cols=122 Identities=21% Similarity=0.281 Sum_probs=100.2
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQY 485 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~ 485 (564)
.++.++..+|.|++|.|+.+||..++... ..+..+|..+|.+++|.|+..||..++........++.+ .+|..
T Consensus 48 ~~~~l~~~~d~d~~g~i~~~ef~~~~~~~------~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~-~~~~~ 120 (173)
T d1alva_ 48 TCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLY-SMIIR 120 (173)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHH-HHHHH
T ss_pred HHHHHHHHhccCCCCcccchhhhhhhhhh------hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHH-HHhhc
Confidence 45677889999999999999999988753 457889999999999999999999887665544444444 45666
Q ss_pred hCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHHHH
Q 008475 486 FDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRI--DYGEFVAMMQ 538 (564)
Q Consensus 486 ~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I--~~~eF~~~~~ 538 (564)
+|.|++|.|+.+||.+++.. -+.+..+|+.+|.|++|.| +|+||+.+..
T Consensus 121 ~d~d~~G~i~~~EF~~~~~~----~~~~~~~f~~~D~d~~G~it~~~~efl~~~~ 171 (173)
T d1alva_ 121 RYSDEGGNMDFDNFISCLVR----LDAMFRAFKSLDKDGTGQIQVNIQEWLQLTM 171 (173)
T ss_dssp HHTCSSSCBCHHHHHHHHHH----HHHHHHHHHHHSSSCCSEEEEEHHHHHHHHH
T ss_pred cccCCCCeEeHHHHHHHHHH----HHHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 77799999999999998843 4677889999999999988 6899998653
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.36 E-value=1.5e-12 Score=99.10 Aligned_cols=65 Identities=28% Similarity=0.447 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC-CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN-MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~-~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...++++|+.+|.|++|.|+..||+.+++.+| ++++++.++|..+|.|++|.|+|+||+.+|...
T Consensus 5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~ 70 (81)
T d2opoa1 5 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 70 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence 45688999999999999999999999999997 899999999999999999999999999998754
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.36 E-value=4.6e-13 Score=102.01 Aligned_cols=70 Identities=30% Similarity=0.529 Sum_probs=65.2
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
|++++..++++|+.+|.|++|+|+..||..+++.+| .++..++..+|..+|.|++|.|+|+||+.++...
T Consensus 1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~ 70 (81)
T d2opoa1 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 70 (81)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence 578899999999999999999999999999999998 5799999999999999999999999999877543
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.36 E-value=1.5e-12 Score=116.45 Aligned_cols=120 Identities=20% Similarity=0.249 Sum_probs=96.4
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQY 485 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~ 485 (564)
.++.++..+|.|++|.|+.+||..++..+ ..++.+|..+|.|++|.|+..||..++..+......+.+..++..
T Consensus 64 ~~~~li~~~D~d~~G~i~~~EF~~l~~~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~ 137 (188)
T d1qxpa2 64 SCRSMVNLMDRDGNGKLGLVEFNILWNRI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR 137 (188)
T ss_dssp HHHHHHHHHCC--CCCCCSSSHHHHHHHH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHhhh------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 35677888999999999999999988754 568889999999999999999999888766554455556666666
Q ss_pred hCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcce--eHHHHHHH
Q 008475 486 FDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRI--DYGEFVAM 536 (564)
Q Consensus 486 ~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I--~~~eF~~~ 536 (564)
+ .+++|.|+.+||..++.. -..+.++|+.+|.+++|.| +++||+.+
T Consensus 138 ~-~~~dg~i~f~eFi~~~~~----l~~~~~~F~~~D~~~~G~i~l~~~efl~~ 185 (188)
T d1qxpa2 138 F-ADDELIIDFDNFVRCLVR----LEILFKIFKQLDPENTGTIQLDLISWLSF 185 (188)
T ss_dssp T-SCSSSBCCHHHHHHHHHH----HHHHHHHHHHSCSSCCSCEEEEHHHHHHH
T ss_pred h-cCCCCcCCHHHHHHHHHH----HHHHHHHHHHhCCCCCCeEEeeHHHHHHH
Confidence 4 599999999999988753 3556778999999999966 89999865
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.35 E-value=6.6e-13 Score=96.51 Aligned_cols=62 Identities=47% Similarity=0.845 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
++.++.+|+.||+|++|+|+.+||+.+++.+| +++.+++.++..+|.|++|.|+|+||+++|
T Consensus 2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp CHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 35689999999999999999999999999987 889999999999999999999999999864
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.35 E-value=6.5e-13 Score=101.18 Aligned_cols=72 Identities=38% Similarity=0.581 Sum_probs=68.8
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
.++++++..++++|..+|.|++|+|+..||..+++.+|.++++.++..+|..+|.+++|.|+|+||+.++..
T Consensus 7 ~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 7 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999998753
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.34 E-value=1.5e-12 Score=98.27 Aligned_cols=68 Identities=35% Similarity=0.668 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN 541 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~ 541 (564)
.+++.++++|+.+|.|++|+|+.+||+.+|+.+| +++.++.++|..+|.|++|.|+|+||+++|.+..
T Consensus 6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~~ 75 (77)
T d1oqpa_ 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 75 (77)
T ss_dssp SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHccC
Confidence 4567899999999999999999999999999977 7899999999999999999999999999998763
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.34 E-value=1.6e-12 Score=95.15 Aligned_cols=62 Identities=24% Similarity=0.478 Sum_probs=58.7
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 479 LVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 479 l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
++++|+.+|.|++|+|+..||+.+++.+| +++++++++|..+|.|+||.|+|+||+++|.+.
T Consensus 3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~~ 66 (67)
T d1tiza_ 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM 66 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHTC
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence 67899999999999999999999999987 889999999999999999999999999999764
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.33 E-value=5e-13 Score=97.98 Aligned_cols=63 Identities=35% Similarity=0.662 Sum_probs=59.0
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
+.++.+|+.||.+++|+|+.+||+.+++.+| +++++++.+|..+|.|+||.|+|+||+.+|.+
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r 67 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 67 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 4688999999999999999999999999886 68999999999999999999999999999865
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.33 E-value=1.8e-12 Score=98.64 Aligned_cols=65 Identities=38% Similarity=0.738 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
+++.++++|+.||.|++|+|+.+||+.+++.+| +++++++.+|..+|.|+||.|+|+||+++|..
T Consensus 13 ~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79 (81)
T ss_dssp CHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred CHHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 456789999999999999999999999999988 89999999999999999999999999999864
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=99.33 E-value=2.2e-12 Score=126.25 Aligned_cols=128 Identities=24% Similarity=0.399 Sum_probs=110.8
Q ss_pred HHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHH
Q 008475 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAF 483 (564)
Q Consensus 404 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F 483 (564)
...+...|..+|.+++|.++..++...+...+.. .......++..++.+++|.+.+.+|...... ...+..+|
T Consensus 187 ~~~~~~~F~~~d~d~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~------~~~~~~~F 259 (321)
T d1ij5a_ 187 LAALVADFRKIDTNSNGTLSRKEFREHFVRLGFD-KKSVQDALFRYADEDESDDVGFSEYVHLGLC------LLVLRILY 259 (321)
T ss_dssp HHTSCCCHHHHCTTCCSEECHHHHHHHHHHTTCC-CHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH------HHHHHHHH
T ss_pred hhhhhHHHHHHhhcccccchhHHHhhhhhccccc-chHHHHHHHHhhhcccccccccccccchhhh------hhHHHHHH
Confidence 3456778999999999999999999999987765 4566778889999999999999999776532 23456789
Q ss_pred HHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 484 QYFDKDGSGYITVDELQQACAEHN---MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 484 ~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
..+|.|++|+|+.+||+.++...| ++++++..+|..+|.|+||.|+|+||+++|.
T Consensus 260 ~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml 317 (321)
T d1ij5a_ 260 AFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL 317 (321)
T ss_dssp HHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred HHHhcCCCCCCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 999999999999999999999887 4567899999999999999999999999885
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.32 E-value=4.7e-12 Score=108.12 Aligned_cols=117 Identities=12% Similarity=0.276 Sum_probs=101.0
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC-C--CCHHHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH-N--MTDVLLEDII 517 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~-~--~~~~~~~~~~ 517 (564)
++++.+|..+|.+++|.|+++||..++..+........+..++. +++|.|+.++|..++... . -+.+++..+|
T Consensus 7 ~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~aF 82 (142)
T d1wdcb_ 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAF 82 (142)
T ss_dssp HHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchhhhHHHhh
Confidence 34677899999999999999999998877766666666766664 678999999999988642 2 4578899999
Q ss_pred HHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCC
Q 008475 518 REVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPG 562 (564)
Q Consensus 518 ~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g 562 (564)
..+|.|++|.|+.+||..++...+..++.+++.++|+.+|.| +|
T Consensus 83 ~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G 126 (142)
T d1wdcb_ 83 AMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GG 126 (142)
T ss_dssp HTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TT
T ss_pred hhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CC
Confidence 999999999999999999999998889999999999999998 46
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.32 E-value=1.4e-12 Score=116.47 Aligned_cols=120 Identities=23% Similarity=0.284 Sum_probs=105.8
Q ss_pred HHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHH
Q 008475 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIRE 519 (564)
Q Consensus 442 ~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~ 519 (564)
+++++|..+|.+++|.|+++||..++..+........+..+|..+|.+++|.|+.++|..++.... ...+.+..+|..
T Consensus 11 ~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~e~l~~aF~~ 90 (182)
T d1s6ia_ 11 GLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSY 90 (182)
T ss_dssp SHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccHHHHHHHHHH
Confidence 478899999999999999999999888776666678899999999999999999999998775532 445678899999
Q ss_pred hCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 520 VDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 520 ~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+|.+++|.|+.+||.+++... +++.+++..+|+.+|.|+||+
T Consensus 91 ~D~d~~G~i~~~el~~~l~~~--gl~~~ev~~~f~~~D~d~DG~ 132 (182)
T d1s6ia_ 91 FDKDGSGYITLDEIQQACKDF--GLDDIHIDDMIKEIDQDNDGQ 132 (182)
T ss_dssp TTTTCSSEEEHHHHHHTTTTT--TCCTTHHHHHHHHHCSSSSSE
T ss_pred HhhcCCCccchhhhhhhhhhc--CccHHHHHHHHHHhhcCCCCe
Confidence 999999999999999998765 478899999999999999994
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.32 E-value=3e-12 Score=111.34 Aligned_cols=122 Identities=22% Similarity=0.315 Sum_probs=104.8
Q ss_pred HHHHHHHhcCCCC-CCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC------CCCHHHHH
Q 008475 442 EIRDLMDAADVDN-SGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH------NMTDVLLE 514 (564)
Q Consensus 442 ~~~~~~~~~D~~~-~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~------~~~~~~~~ 514 (564)
+++.+|..+|.++ +|.|+..||..++..+........+..++..++.+++|.++.+++....... +.+.+.+.
T Consensus 15 ~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (156)
T d1dtla_ 15 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS 94 (156)
T ss_dssp HHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHH
T ss_pred HHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhcccccccccHHHHHH
Confidence 4566799999995 8999999999888777666677888899999999999999999988765421 24567789
Q ss_pred HHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 515 DIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 515 ~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+|..+|.|++|.|+.+||.+++...+..++.+++..+|+.+|.|+||+
T Consensus 95 ~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~ 143 (156)
T d1dtla_ 95 DLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 143 (156)
T ss_dssp HHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSE
T ss_pred HHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCe
Confidence 9999999999999999999999999999999999999999999999994
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.32 E-value=4.9e-12 Score=112.91 Aligned_cols=141 Identities=16% Similarity=0.178 Sum_probs=111.3
Q ss_pred CCCHHHHHHHHHhhCCCCCHHHHHHHHHhc-CCCCCCccchhhhHHHHhhhchhh-HHHHHHHHHHHhCCCCCCceeHHH
Q 008475 421 AITFDELKAGLRRYGSTLKDTEIRDLMDAA-DVDNSGTIDYGEFIAATVHLNKLE-REEHLVAAFQYFDKDGSGYITVDE 498 (564)
Q Consensus 421 ~I~~~el~~~l~~~~~~~~~~~~~~~~~~~-D~~~~g~I~~~eF~~~~~~~~~~~-~~~~l~~~F~~~D~d~dG~I~~~e 498 (564)
.++.+++..+.+.. ..+..+++.++..+ +.+++|.|+++||...+..+.... ....+..+|..+|.+++|.|+.+|
T Consensus 3 ~l~~~~~~~L~~~t--~fs~~ei~~l~~~F~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~e 80 (181)
T d1bjfa_ 3 KLRPEVMQDLLEST--DFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFRE 80 (181)
T ss_dssp CCCHHHHHHHHHHS--SCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHH
T ss_pred CCCHHHHHHHHHhc--CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHH
Confidence 56677777777653 44688888888875 457899999999999876654333 234567899999999999999999
Q ss_pred HHHHHHhC--CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCC------------CCCChHHHHHHHhHHccCCCCC
Q 008475 499 LQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGN------------VGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 499 ~~~~l~~~--~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~------------~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
|..++... +..++.+..+|..+|.|++|.|+++||..++.... .....+.+.++|+++|.||||+
T Consensus 81 Fl~~~~~~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~ 159 (181)
T d1bjfa_ 81 FIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGK 159 (181)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSE
T ss_pred HHHHHHHHhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCc
Confidence 99988654 34567789999999999999999999999887531 1223456789999999999994
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.31 E-value=4.2e-12 Score=96.56 Aligned_cols=64 Identities=41% Similarity=0.607 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
...++.+|+.+|.|++|.|+.+||+.+|+.+| +++.++.++|..+|.|++|.|+|+||+.+|.+
T Consensus 13 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 13 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 45688999999999999999999999999987 89999999999999999999999999999864
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.30 E-value=3e-12 Score=109.97 Aligned_cols=121 Identities=12% Similarity=0.128 Sum_probs=101.9
Q ss_pred HHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHH-HhCCCCCCceeHHHHHHHHHhC--------CCCHHHH
Q 008475 443 IRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQ-YFDKDGSGYITVDELQQACAEH--------NMTDVLL 513 (564)
Q Consensus 443 ~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~-~~D~d~dG~I~~~e~~~~l~~~--------~~~~~~~ 513 (564)
++.+|..+|.+++|.|+.+||..++..++...+.+.+..++. ..+.+.+|.|+.++|..++... ....+++
T Consensus 4 ~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~l 83 (146)
T d1m45a_ 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDF 83 (146)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHH
T ss_pred HHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHHH
Confidence 357899999999999999999998877765566777778776 4566778999999999987532 2456788
Q ss_pred HHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 514 EDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 514 ~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
..+|..+|.+++|.|+.+||..++...+..++.+++.++|..+|.|+||.
T Consensus 84 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~ 133 (146)
T d1m45a_ 84 VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGE 133 (146)
T ss_dssp HHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSE
T ss_pred HHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999999988899999999999999999994
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=1.2e-13 Score=121.92 Aligned_cols=131 Identities=11% Similarity=0.138 Sum_probs=91.5
Q ss_pred Hhhhhhc--ccCCCCCCCCHHHHHHHHHhhCCCC--CHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHH
Q 008475 407 LKEMFKA--MDTDNSGAITFDELKAGLRRYGSTL--KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAA 482 (564)
Q Consensus 407 l~~~F~~--~D~d~~G~I~~~el~~~l~~~~~~~--~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~ 482 (564)
|+++|.. +|.|++|.|+..||.+++...+... ..+.+..++...|.+++|.|+|+||...+..+.. ...+..+
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~---r~ei~~~ 83 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP---RPEIDEI 83 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC---CHHHHTT
T ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCC---HHHHHHH
Confidence 4445554 7999999999999999987543322 2335566788889999999999999998776543 3457889
Q ss_pred HHHhCCCCCCceeHHHHHHHHHhCC------------CCHHHHHHHHHHhCCCC----CcceeHHHHHHHHHcC
Q 008475 483 FQYFDKDGSGYITVDELQQACAEHN------------MTDVLLEDIIREVDQDN----DGRIDYGEFVAMMQKG 540 (564)
Q Consensus 483 F~~~D~d~dG~I~~~e~~~~l~~~~------------~~~~~~~~~~~~~d~d~----dg~I~~~eF~~~~~~~ 540 (564)
|..||.|++|.||.+||..+|...+ ++.+.+.+++..+..+. +|.|++++|+.+|...
T Consensus 84 F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S~ 157 (170)
T d2zkmx1 84 FTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGP 157 (170)
T ss_dssp CC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHST
T ss_pred HHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcCc
Confidence 9999999999999999999998643 35567889999987764 4889999999988755
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=1.2e-11 Score=110.97 Aligned_cols=142 Identities=18% Similarity=0.228 Sum_probs=108.6
Q ss_pred CCCCHHHHHHHHHhhCCCCCHHHHHHHHHhc-CCCCCCccchhhhHHHHhhhchhh-HHHHHHHHHHHhCCCCCCceeHH
Q 008475 420 GAITFDELKAGLRRYGSTLKDTEIRDLMDAA-DVDNSGTIDYGEFIAATVHLNKLE-REEHLVAAFQYFDKDGSGYITVD 497 (564)
Q Consensus 420 G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~-D~~~~g~I~~~eF~~~~~~~~~~~-~~~~l~~~F~~~D~d~dG~I~~~ 497 (564)
-.++.+++..+.+.. .++..++..++..+ +.+++|.++..+|...+....... .......+|+.+|.+++|.|+..
T Consensus 3 skl~~e~i~~l~~~t--~fs~~Ei~~l~~~F~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~ 80 (187)
T d1g8ia_ 3 SKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFS 80 (187)
T ss_dssp CSCCHHHHHHHHHTS--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHH
T ss_pred ccCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHH
Confidence 356666666665543 35678888888877 456789999999988876554433 23445679999999999999999
Q ss_pred HHHHHHHhC--CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC------------CCCCChHHHHHHHhHHccCCCCC
Q 008475 498 ELQQACAEH--NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG------------NVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 498 e~~~~l~~~--~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~------------~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
||..++... +..++.+..+|..+|.|+||.|+.+|+..++... ......+.+..+|+++|.||||+
T Consensus 81 EF~~~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~ 160 (187)
T d1g8ia_ 81 EFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGK 160 (187)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSE
T ss_pred HHHHHHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCc
Confidence 999888654 3456779999999999999999999999887642 11122456778999999999994
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.30 E-value=5e-12 Score=112.49 Aligned_cols=128 Identities=14% Similarity=0.163 Sum_probs=100.1
Q ss_pred CCCCHHHHHHHHHhc-CCCCCCccchhhhHHHHhhhchh-hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC--CCCHH
Q 008475 436 STLKDTEIRDLMDAA-DVDNSGTIDYGEFIAATVHLNKL-EREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDV 511 (564)
Q Consensus 436 ~~~~~~~~~~~~~~~-D~~~~g~I~~~eF~~~~~~~~~~-~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~--~~~~~ 511 (564)
...+..+++.+++.+ +.+++|.|+++||..++..+... .....+..+|..+|.+++|.|+.+||..++... +..++
T Consensus 8 t~ft~~ei~~l~~~F~~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~ 87 (178)
T d1s6ca_ 8 TNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 87 (178)
T ss_dssp SSCCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccchHH
Confidence 345788888888876 66789999999999887665433 344556789999999999999999998887543 35577
Q ss_pred HHHHHHHHhCCCCCcceeHHHHHHHHHcC------------CCCCChHHHHHHHhHHccCCCCC
Q 008475 512 LLEDIIREVDQDNDGRIDYGEFVAMMQKG------------NVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 512 ~~~~~~~~~d~d~dg~I~~~eF~~~~~~~------------~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+..+|..+|.|++|.|+++|+..++... ........+..+|+.+|.||||+
T Consensus 88 ~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~ 151 (178)
T d1s6ca_ 88 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 151 (178)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSE
T ss_pred HHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCc
Confidence 88999999999999999999998866532 11112344568999999999994
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.30 E-value=2.7e-12 Score=91.79 Aligned_cols=59 Identities=34% Similarity=0.694 Sum_probs=55.7
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHH
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVA 535 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~ 535 (564)
+.++++|+.+|++++|+|+.+||+.+|+.+| +++.++..+|..+|.|++|.|+|+||++
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 3578999999999999999999999999987 8999999999999999999999999984
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.29 E-value=4.2e-13 Score=103.69 Aligned_cols=83 Identities=35% Similarity=0.533 Sum_probs=68.1
Q ss_pred CCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeH
Q 008475 453 DNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDY 530 (564)
Q Consensus 453 ~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~ 530 (564)
+++|+|+..+.... ..+.. .....++.+|..+|+|++|.|+.+||+.+|+.+| +++++++++|..+|.|++|.|+|
T Consensus 1 ~~~g~id~~~~~ma-~~l~~-~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~ 78 (87)
T d1s6ja_ 1 HSSGHIDDDDKHMA-ERLSE-EEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78 (87)
T ss_dssp CCSSSSSSHHHHSS-SSSCS-SSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECH
T ss_pred CCCCccCchHHHHH-hhCCH-HHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeH
Confidence 35788988875321 22222 2233478999999999999999999999999988 88999999999999999999999
Q ss_pred HHHHHHH
Q 008475 531 GEFVAMM 537 (564)
Q Consensus 531 ~eF~~~~ 537 (564)
+||+.+|
T Consensus 79 ~EFl~am 85 (87)
T d1s6ja_ 79 GEFIAAT 85 (87)
T ss_dssp HHHTTCC
T ss_pred HHHHHHH
Confidence 9998754
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.29 E-value=4.8e-12 Score=108.51 Aligned_cols=119 Identities=15% Similarity=0.265 Sum_probs=99.5
Q ss_pred HHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC---CCCHHHHHHHHH
Q 008475 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH---NMTDVLLEDIIR 518 (564)
Q Consensus 442 ~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---~~~~~~~~~~~~ 518 (564)
+++++|..+|.+++|+|+.+||..++..+........ .+..++.+++|.|+.++|..++... ....+++.++|+
T Consensus 8 el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~aF~ 84 (145)
T d2mysb_ 8 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFK 84 (145)
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHH---HHHHHHHhccCceeechhhhhhhhcccccchHHHHHHHHH
Confidence 4667899999999999999999988876653333322 2344556789999999999988553 245677999999
Q ss_pred HhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 519 EVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 519 ~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.+|.+++|.|+.+||.+++...+..++.+++.++|+.+|.|++|.
T Consensus 85 ~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~ 129 (145)
T d2mysb_ 85 VLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGN 129 (145)
T ss_pred hhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCe
Confidence 999999999999999999999999999999999999999999984
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.29 E-value=1.9e-13 Score=105.68 Aligned_cols=75 Identities=75% Similarity=1.116 Sum_probs=70.2
Q ss_pred HHhhhhhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHH
Q 008475 393 RVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 467 (564)
Q Consensus 393 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~ 467 (564)
+.++..++++++..++++|..+|.+++|.|+..||..+++.+|..+++.+++.+|..+|.+++|.|+|+||+.++
T Consensus 11 ~~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am 85 (87)
T d1s6ja_ 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence 445678899999999999999999999999999999999999999999999999999999999999999998654
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.28 E-value=5e-12 Score=107.65 Aligned_cols=118 Identities=13% Similarity=0.087 Sum_probs=101.0
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC-----CCHHHHHH
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN-----MTDVLLED 515 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~-----~~~~~~~~ 515 (564)
.++++.|..+|.+++|.|+++||..++..++...+...+. .++.+++|.|+.++|..++.... -..+++.+
T Consensus 5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~----~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~ 80 (140)
T d1ggwa_ 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEIT----EIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHH----HHHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhh----hhhccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence 4568899999999999999999998887766555555443 45778999999999999986431 35678999
Q ss_pred HHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 516 IIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 516 ~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+|..+|.+++|.|+.+||.+++...+..++.+++.++|+.+|.+ ||.
T Consensus 81 aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~ 127 (140)
T d1ggwa_ 81 GFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGM 127 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCC
T ss_pred HHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCE
Confidence 99999999999999999999999998889999999999999998 884
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.27 E-value=6e-12 Score=93.70 Aligned_cols=64 Identities=42% Similarity=0.671 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
...++.+|+.+|.|++|.|+.+||+.+++.+| ++++++..++..+|.|++|.|+|+||+.+|.+
T Consensus 7 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~ 72 (73)
T d2pq3a1 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72 (73)
T ss_dssp HHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 35688999999999999999999999999987 78999999999999999999999999998864
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.26 E-value=7.2e-12 Score=94.41 Aligned_cols=64 Identities=30% Similarity=0.568 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
...++.+|+.+|.|++|+|+.+||+.+|+.+| ++++++.+++..+|.+++|.|+|+||+.+|.+
T Consensus 9 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp HHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 35688999999999999999999999999887 88999999999999999999999999999864
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.25 E-value=1.3e-11 Score=93.73 Aligned_cols=65 Identities=32% Similarity=0.530 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHhCCCC-CCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 475 REEHLVAAFQYFDKDG-SGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~-dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
....++++|+.||+++ +|.|+..||+.+|+.+| +++.++++++..+|.|++|.|+|+||+.+|.+
T Consensus 13 q~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 13 QKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 3466889999999995 89999999999999988 78999999999999999999999999999875
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=6.6e-12 Score=110.18 Aligned_cols=117 Identities=21% Similarity=0.359 Sum_probs=93.1
Q ss_pred HHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---CCHHHHHHHHHH
Q 008475 443 IRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN---MTDVLLEDIIRE 519 (564)
Q Consensus 443 ~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---~~~~~~~~~~~~ 519 (564)
+.++|..+|.+++|.|+++||..+..... ...+..+|..+|.+++|.|+.+||..++.... .....+..+|..
T Consensus 18 l~~~F~~~D~d~~G~I~~~E~~~~~~~~~----~~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~~~~~~~~~f~~ 93 (165)
T d1auib_ 18 LGKRFKKLDLDNSGSLSVEEFMSLPELQQ----NPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRI 93 (165)
T ss_dssp HHHHHHHHCTTCCSEECHHHHTTSHHHHT----CTTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCcHHHHHHhhhccC----CHHHHHHHHHHccccchhhhhhhhhhhccccccchhhHHHHHHHHHH
Confidence 46678999999999999999976432211 12356789999999999999999999987653 234568999999
Q ss_pred hCCCCCcceeHHHHHHHHHcC-CCCCC----hHHHHHHHhHHccCCCCC
Q 008475 520 VDQDNDGRIDYGEFVAMMQKG-NVGLG----RRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 520 ~d~d~dg~I~~~eF~~~~~~~-~~~~~----~~~~~~~f~~~D~~~~g~ 563 (564)
+|.|++|.|+.+|+.+++... +..+. ...+..+|..+|.|+||+
T Consensus 94 ~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~ 142 (165)
T d1auib_ 94 YDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGR 142 (165)
T ss_dssp HCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSS
T ss_pred hcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCc
Confidence 999999999999999988653 33333 344678999999999995
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.25 E-value=3.6e-12 Score=92.50 Aligned_cols=62 Identities=31% Similarity=0.664 Sum_probs=59.2
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHH
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 466 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~ 466 (564)
+.|+++|+.+|.+++|+|+.+||+.+++.+|.+++..+++.++..+|.+++|.|+|+||+.+
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~ 64 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 64 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999875
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.24 E-value=5e-12 Score=94.54 Aligned_cols=65 Identities=32% Similarity=0.560 Sum_probs=61.7
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
+.++++|+.+|.+++|+|+..||..+|+.+|..++..+++.++..+|.+++|.|+|+||+.++..
T Consensus 9 eel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 9 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp HHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 35889999999999999999999999999999999999999999999999999999999988764
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.23 E-value=2.5e-11 Score=104.78 Aligned_cols=119 Identities=15% Similarity=0.168 Sum_probs=99.9
Q ss_pred HHHHHHHhcCC--CCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC----CCCHHHHHH
Q 008475 442 EIRDLMDAADV--DNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH----NMTDVLLED 515 (564)
Q Consensus 442 ~~~~~~~~~D~--~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~----~~~~~~~~~ 515 (564)
+++.+|..+|. +++|.|+..||..++..++...+...+.. +...|.+++|.|+.+||..++... .-..+++.+
T Consensus 8 ~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~-~~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~~ 86 (152)
T d1wdcc_ 8 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFA-VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYME 86 (152)
T ss_dssp HHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHH-TTCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHH
T ss_pred HHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhh-hhhhhccccccccccccccccccccccchhHHHhhhh
Confidence 45678999984 88999999999998877665555665655 345688899999999999887543 246788999
Q ss_pred HHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCC
Q 008475 516 IIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAP 561 (564)
Q Consensus 516 ~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~ 561 (564)
+|+.+|.+++|.|+.+||..++...+..++.+++.++++.+|.++|
T Consensus 87 aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d 132 (152)
T d1wdcc_ 87 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQED 132 (152)
T ss_dssp HHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCC
T ss_pred hhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCC
Confidence 9999999999999999999999999999999999999999997554
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=99.22 E-value=4.1e-11 Score=105.93 Aligned_cols=122 Identities=18% Similarity=0.234 Sum_probs=94.2
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh---------hHHHHHHHHHHHh--CCCCCCceeHHHHHHHHHhCC-
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL---------EREEHLVAAFQYF--DKDGSGYITVDELQQACAEHN- 507 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~---------~~~~~l~~~F~~~--D~d~dG~I~~~e~~~~l~~~~- 507 (564)
..+++.+|..+|.|++|.|+++||..++..+... .........+..+ |.+++|.|+.+||...+....
T Consensus 5 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~ 84 (174)
T d2scpa_ 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVK 84 (174)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhhhc
Confidence 3567899999999999999999998776543211 1112233344433 678899999999998886532
Q ss_pred ---C---CHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 508 ---M---TDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 508 ---~---~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
. ....+..+|..+|.|+||.|+.+||..++... +++.+++..+|+.+|.|+||+
T Consensus 85 ~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~--~~~~~~~~~~f~~~D~d~dG~ 144 (174)
T d2scpa_ 85 NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML--GLDKTMAPASFDAIDTNNDGL 144 (174)
T ss_dssp CGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHT--TCCGGGHHHHHHHHCTTCSSE
T ss_pred chhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHH--hhhhHHHHHHHhhcCCCCCCc
Confidence 1 13347789999999999999999999998765 567788999999999999994
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.21 E-value=6.2e-12 Score=91.88 Aligned_cols=63 Identities=21% Similarity=0.481 Sum_probs=60.0
Q ss_pred HhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 407 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
++++|+.+|.|++|+|+..||..+++.+|..+++++++.+|..+|.+++|.|+|+||+.++..
T Consensus 3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999999999999988754
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.21 E-value=4.7e-11 Score=106.62 Aligned_cols=122 Identities=14% Similarity=0.168 Sum_probs=97.1
Q ss_pred HHHHHHHHHh-cCCCCCCccchhhhHHHHhhhchh-------h--------HHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 008475 440 DTEIRDLMDA-ADVDNSGTIDYGEFIAATVHLNKL-------E--------REEHLVAAFQYFDKDGSGYITVDELQQAC 503 (564)
Q Consensus 440 ~~~~~~~~~~-~D~~~~g~I~~~eF~~~~~~~~~~-------~--------~~~~l~~~F~~~D~d~dG~I~~~e~~~~l 503 (564)
..+++.+|.. +|.|++|.|+++||..++..+... . ........+...|.+++|.|+.+++...+
T Consensus 7 ~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~ 86 (185)
T d2sasa_ 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW 86 (185)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeHhhHHH
Confidence 4568889987 599999999999998776543211 0 11233456788899999999999999887
Q ss_pred HhC-----------CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 504 AEH-----------NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 504 ~~~-----------~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
... ......+..+|..+|.|++|.|+.+||..++... +++.+++..+|+.+|.|+||.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~--~l~~~~~~~~f~~~D~d~dG~ 155 (185)
T d2sasa_ 87 EKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF--QLQCADVPAVYNVITDGGKVT 155 (185)
T ss_dssp HHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSS--CCCCSSHHHHHHHHHTTTTSC
T ss_pred HHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHc--CCCHHHHHHHHHHcCCCCCCC
Confidence 542 0224458889999999999999999999998754 578889999999999999995
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=8.4e-12 Score=106.13 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=102.1
Q ss_pred HHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCC--CCCCceeHHHHHHHHHhCC-----CCHHHHH
Q 008475 442 EIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDK--DGSGYITVDELQQACAEHN-----MTDVLLE 514 (564)
Q Consensus 442 ~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~--d~dG~I~~~e~~~~l~~~~-----~~~~~~~ 514 (564)
++++.|..+|.+++|.|+.+|+..++..+....+...+..++..++. +++|.|+..+|..++.... ...+++.
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~ 80 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYL 80 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCH
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHH
Confidence 36789999999999999999999988877766777778888887763 6799999999999886532 2234578
Q ss_pred HHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 515 DIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 515 ~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
++|..+|.+++|.|+.+||..++...+..++.+++..++.. |.|+||.
T Consensus 81 ~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dg~ 128 (139)
T d1w7jb1 81 EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGC 128 (139)
T ss_dssp HHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTT-CCCTTSE
T ss_pred HhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCe
Confidence 89999999999999999999999999888999999998875 8899984
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.19 E-value=1e-11 Score=93.52 Aligned_cols=66 Identities=29% Similarity=0.524 Sum_probs=62.3
Q ss_pred HHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 404 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
.+.++++|+.+|.|++|+|+.+||..+++.++.+++..++..+|..+|.+++|.|+|+||+.++.+
T Consensus 8 ~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73 (77)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 456899999999999999999999999999999999999999999999999999999999988754
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.19 E-value=1e-11 Score=88.79 Aligned_cols=60 Identities=30% Similarity=0.659 Sum_probs=57.7
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIA 465 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~ 465 (564)
.++++|+.+|++++|+|+..||+.+++.+|..++..++..+|..+|.+++|.|+|+||+.
T Consensus 2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 578999999999999999999999999999999999999999999999999999999973
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.19 E-value=9e-12 Score=94.70 Aligned_cols=65 Identities=34% Similarity=0.630 Sum_probs=61.5
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhh
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH 469 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~ 469 (564)
+.|+++|..+|.|++|+|+..||..+++.+|.+++..+++.+|..+|.+++|.|+|+||+.++..
T Consensus 15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79 (81)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 46889999999999999999999999999999999999999999999999999999999988753
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.17 E-value=9.6e-11 Score=103.47 Aligned_cols=123 Identities=15% Similarity=0.272 Sum_probs=98.1
Q ss_pred CHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchh-------h--------HHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 008475 439 KDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKL-------E--------REEHLVAAFQYFDKDGSGYITVDELQQAC 503 (564)
Q Consensus 439 ~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~-------~--------~~~~l~~~F~~~D~d~dG~I~~~e~~~~l 503 (564)
+.+.++.+|..+|.|++|.|+++||..++..+... . ........+...|.+++|.|+..++...+
T Consensus 5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (176)
T d1nyaa_ 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 46778999999999999999999998876543211 0 11223456778899999999999998877
Q ss_pred HhCC----------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 504 AEHN----------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 504 ~~~~----------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
.... .....+..+|..+|.|+||.|+.+||..++... +++...+..+|+.+|.|+||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~--~~~~~~~~~~f~~~D~d~dG~ 152 (176)
T d1nyaa_ 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL--GMSKAEAAEAFNQVDTNGNGE 152 (176)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT--TCCHHHHHHHHHHHCTTCSSE
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhc--CCcHHHHHHHHHHHCCCCCCc
Confidence 5421 123457789999999999999999999999865 578899999999999999995
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.17 E-value=6.5e-11 Score=105.59 Aligned_cols=127 Identities=20% Similarity=0.242 Sum_probs=94.5
Q ss_pred CCCCHHHHHH---HHHhcCC--CCCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---
Q 008475 436 STLKDTEIRD---LMDAADV--DNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--- 507 (564)
Q Consensus 436 ~~~~~~~~~~---~~~~~D~--~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--- 507 (564)
..++..+++. .|..+|. .++|.|+++||..++....... ......+|+.+|.+++|.|+..||..++....
T Consensus 9 t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~ 87 (183)
T d2zfda1 9 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE-SLFADRVFDLFDTKHNGILGFEEFARALSVFHPNA 87 (183)
T ss_dssp SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCC-CHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTS
T ss_pred CCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCC-CHHHHHHHHHHccCCCCcCcHHHHHHHHHhhhccC
Confidence 3445555554 4444554 4799999999988775444332 23467899999999999999999998886542
Q ss_pred CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC----CCCCCh----HHHHHHHhHHccCCCCC
Q 008475 508 MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG----NVGLGR----RTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 508 ~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~----~~~~~~----~~~~~~f~~~D~~~~g~ 563 (564)
..++.+..+|..+|.|++|.|+++|+..++... +..... +.+..+|+++|.|+||+
T Consensus 88 ~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~ 151 (183)
T d2zfda1 88 PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGK 151 (183)
T ss_dssp CHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSE
T ss_pred cHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCe
Confidence 345678899999999999999999999977543 223332 33567899999999994
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.15 E-value=7.8e-12 Score=91.42 Aligned_cols=63 Identities=35% Similarity=0.599 Sum_probs=59.2
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCC-CCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGST-LKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
.++++|+.+|.+++|+|+..||..+++.+|.. .+.++++.++..+|.|++|.|+|+||+.++.
T Consensus 3 el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 3 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 57899999999999999999999999999874 7999999999999999999999999998875
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=99.15 E-value=1.3e-10 Score=104.09 Aligned_cols=122 Identities=14% Similarity=0.203 Sum_probs=91.7
Q ss_pred HHHHHHHhcCCCCCCccchhhhHHHHhhh-----chhhH----HHHH-HHHHHHhCCCCCCceeHHHHHHHHHhC-----
Q 008475 442 EIRDLMDAADVDNSGTIDYGEFIAATVHL-----NKLER----EEHL-VAAFQYFDKDGSGYITVDELQQACAEH----- 506 (564)
Q Consensus 442 ~~~~~~~~~D~~~~g~I~~~eF~~~~~~~-----~~~~~----~~~l-~~~F~~~D~d~dG~I~~~e~~~~l~~~----- 506 (564)
.++.+|..+|.+++|.|+++||...+... ..... ...+ ...+...|.+..|.|+.+++...+...
T Consensus 15 r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~~~ 94 (189)
T d1qv0a_ 15 RHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSEL 94 (189)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHHHHHHhh
Confidence 46889999999999999999998754321 11111 1222 234567788899999999998876431
Q ss_pred -----C---CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 507 -----N---MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 507 -----~---~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
. .....+..+|..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.|+||.
T Consensus 95 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~ 159 (189)
T d1qv0a_ 95 KKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGD 159 (189)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSC
T ss_pred hccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCc
Confidence 1 12335677899999999999999999999999988899999999999999999995
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.08 E-value=2e-10 Score=92.20 Aligned_cols=100 Identities=22% Similarity=0.320 Sum_probs=76.6
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc---hhhH
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN---KLER 475 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~---~~~~ 475 (564)
++++++.++. ..+ +.+|.|+..||..++.. ...+..+++.+|..+|.+++|.|+.+|+..++..+. ...+
T Consensus 6 l~~eeI~~~~---~~~--d~dG~idf~EF~~~~~~--~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls 78 (109)
T d1pvaa_ 6 LKADDIKKAL---DAV--KAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT 78 (109)
T ss_dssp SCHHHHHHHH---HHT--CSTTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC
T ss_pred CCHHHHHHHH---Hhc--CCCCCCcHHHHHHHHHH--ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCC
Confidence 4455544433 333 46788999999876642 234678899999999999999999999987776553 2245
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAE 505 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~ 505 (564)
.+.+..+|+.+|.|+||.|+.+||.+++..
T Consensus 79 ~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 79 DAETKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence 677889999999999999999999998853
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.08 E-value=4.5e-11 Score=89.61 Aligned_cols=66 Identities=29% Similarity=0.514 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhCCC--CCCceeHHHHHHHHHhCC--C--CHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFDKD--GSGYITVDELQQACAEHN--M--TDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d--~dG~I~~~e~~~~l~~~~--~--~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
..+.++.+|+.||.+ ++|+|+.+||+.+|+.+| + ++.++.+++..+|.|+||.|+|+||+.+|.+.
T Consensus 3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~ 74 (76)
T d1qx2a_ 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence 356789999999654 479999999999999876 3 34579999999999999999999999998764
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.08 E-value=3.6e-10 Score=90.71 Aligned_cols=99 Identities=19% Similarity=0.294 Sum_probs=75.4
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc---hhhH
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN---KLER 475 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~---~~~~ 475 (564)
++.+++. +++..+| .+|.|+..||..++.. ...+.++++.+|..+|.+++|.|+.+|+..++..+. ....
T Consensus 6 l~~~di~---~~~~~~~--~~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~ 78 (109)
T d5pala_ 6 LKADDIN---KAISAFK--DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN 78 (109)
T ss_dssp SCHHHHH---HHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCC
T ss_pred ccHHHHH---HHHHhcC--CCCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCC
Confidence 4455543 4444443 4688999999876542 234578899999999999999999999987775542 2235
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACA 504 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~ 504 (564)
.+.+..+|+.+|.|+||.|+.+||.+++.
T Consensus 79 ~~e~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (109)
T d5pala_ 79 DTETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 67789999999999999999999998875
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=99.04 E-value=8.4e-10 Score=98.46 Aligned_cols=123 Identities=14% Similarity=0.197 Sum_probs=93.7
Q ss_pred HHHHHHHHhcCCCCCCccchhhhHHHHhhhc-----hhhHH-----HHHHHHHHHhCCCCCCceeHHHHHHHHHhC----
Q 008475 441 TEIRDLMDAADVDNSGTIDYGEFIAATVHLN-----KLERE-----EHLVAAFQYFDKDGSGYITVDELQQACAEH---- 506 (564)
Q Consensus 441 ~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~-----~~~~~-----~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~---- 506 (564)
..++.+|..+|.|++|.|+++||...+.... ..... ......+...+...++.++..++...+...
T Consensus 12 ~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (187)
T d1uhka1 12 GRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDE 91 (187)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHHHHHHH
Confidence 4578899999999999999999987653321 11111 122333445566677889999987665432
Q ss_pred ------C---CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCCCCChHHHHHHHhHHccCCCCC
Q 008475 507 ------N---MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNVGLGRRTMRNSLNMSMRDAPGS 563 (564)
Q Consensus 507 ------~---~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~ 563 (564)
+ .....+..+|..+|.|++|.|+.+||..++...+..++.+.+..+|+.+|.|+||.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~ 157 (187)
T d1uhka1 92 LEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQ 157 (187)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSC
T ss_pred HHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCC
Confidence 1 12244788999999999999999999999999888889999999999999999995
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=1.5e-10 Score=88.42 Aligned_cols=62 Identities=21% Similarity=0.472 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
...+.++|+.+|.+++|.|+.+||+++|..++ ++++++..++..+|.|++|.|+|.||+..+
T Consensus 19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 45688999999999999999999999999877 899999999999999999999999999865
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=1.9e-10 Score=87.86 Aligned_cols=64 Identities=22% Similarity=0.389 Sum_probs=60.7
Q ss_pred HHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHH
Q 008475 404 IAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 467 (564)
Q Consensus 404 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~ 467 (564)
...+.++|+.+|.+++|.|+.+||..+|..++..+++.++..+|..+|.+++|.|+|.||+..+
T Consensus 19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 4568899999999999999999999999999999999999999999999999999999998765
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=2.5e-10 Score=89.40 Aligned_cols=62 Identities=19% Similarity=0.320 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
...++++|+.+|+|++|.|+.+|++.++...|++.++++++++.+|.|+||.|+++||+.+|
T Consensus 9 ~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~am 70 (95)
T d1c07a_ 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAF 70 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999998755
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=1.9e-10 Score=90.10 Aligned_cols=68 Identities=24% Similarity=0.312 Sum_probs=62.4
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
+++++..+++++|+.+|+|++|+|+.+|+..++...+ ++.++++.+|..+|.|++|.|+++||..++.
T Consensus 4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~ 71 (95)
T d1c07a_ 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 5788899999999999999999999999999998765 5789999999999999999999999987663
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.98 E-value=1.7e-10 Score=92.58 Aligned_cols=64 Identities=25% Similarity=0.337 Sum_probs=29.1
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhHHHHhhhch---hhHHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 008475 440 DTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK---LEREEHLVAAFQYFDKDGSGYITVDELQQAC 503 (564)
Q Consensus 440 ~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~---~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l 503 (564)
..+++.+|..+|.|++|+|+++||..++..+.. ....+.+..+|+.+|.|+||.|+.+||..++
T Consensus 40 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m 106 (108)
T d1rroa_ 40 ASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMV 106 (108)
T ss_dssp HHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHH
T ss_pred HHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 344444555555555555555555444433211 1223344444555555555555555554444
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=98.98 E-value=3.3e-10 Score=90.68 Aligned_cols=62 Identities=35% Similarity=0.531 Sum_probs=30.9
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhC---CCCCHHHHHHHHHhcCCCCCCccchhhhHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYG---STLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 467 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~---~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~ 467 (564)
.++.+|+.+|.+++|+|+..||..+++.++ ..++.++++.+|+.+|.|+||.|+|+||+.++
T Consensus 41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m 105 (107)
T d2pvba_ 41 DVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMI 105 (107)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 344555555555555555555555554442 23444555555555555555555555554443
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=98.97 E-value=1.6e-09 Score=87.02 Aligned_cols=101 Identities=21% Similarity=0.213 Sum_probs=75.0
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhch---hh
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNK---LE 474 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~---~~ 474 (564)
-++.+++.++. ..+ +.+|.|+..||..++.... .+..+++.+|..+|.+++|.|+.+||..++..+.. ..
T Consensus 5 ~~~~~~i~~~~---~~~--~~~~~i~f~eF~~~~~~~~--~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~ 77 (109)
T d1rwya_ 5 LLSAEDIKKAI---GAF--TAADSFDHKKFFQMVGLKK--KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL 77 (109)
T ss_dssp HSCHHHHHHHH---HTT--CSTTCCCHHHHHHHHTGGG--SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred hcCHHHHHHHH---Hhc--ccCCCcCHHHHHHHHcccc--CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccC
Confidence 34555554444 343 3357899999987765322 35778889999999999999999999888765532 23
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAE 505 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~ 505 (564)
....+..+|+.+|.|+||.|+.+||.+++..
T Consensus 78 ~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 78 SAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 4667888999999999999999999988753
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.97 E-value=7.9e-10 Score=85.89 Aligned_cols=62 Identities=23% Similarity=0.339 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHH
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 537 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~ 537 (564)
...++++|+.+|+|++|.|+.+|++.++...+++.+++..+++.+|.|+||.|+++||+.++
T Consensus 8 ~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~ 69 (92)
T d1fi6a_ 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAF 69 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHHHHHHhCCCCCCeecHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999998644
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.96 E-value=3.8e-10 Score=87.77 Aligned_cols=68 Identities=24% Similarity=0.311 Sum_probs=62.6
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
+++++..+++++|+.+|.|++|+|+.+|+..++...+ ++..++..+|..+|.|++|.|+|+||..++.
T Consensus 3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~ 70 (92)
T d1fi6a_ 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHcc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence 6788999999999999999999999999999999875 5789999999999999999999999986553
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=1.1e-09 Score=96.91 Aligned_cols=99 Identities=16% Similarity=0.269 Sum_probs=82.0
Q ss_pred HhhhhhcccCC-CCCCCCHHHHHHHHHhhC-CCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc---------hhhH
Q 008475 407 LKEMFKAMDTD-NSGAITFDELKAGLRRYG-STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN---------KLER 475 (564)
Q Consensus 407 l~~~F~~~D~d-~~G~I~~~el~~~l~~~~-~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~---------~~~~ 475 (564)
..++|+.+|.+ ++|.|+.+||..++..+. ....++.++.+|..+|.|++|.|+.+|+..++..+. ....
T Consensus 59 ~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~ 138 (180)
T d1xo5a_ 59 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 138 (180)
T ss_dssp HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTH
T ss_pred HHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHH
Confidence 45688899987 699999999999998765 445577899999999999999999999988765442 1223
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAE 505 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~ 505 (564)
++.+..+|+.+|.|+||.|+.+||.+++..
T Consensus 139 ~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~ 168 (180)
T d1xo5a_ 139 KQLIDNILEESDIDRDGTINLSEFQHVISR 168 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 455778999999999999999999999863
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.94 E-value=2.1e-10 Score=85.82 Aligned_cols=66 Identities=18% Similarity=0.451 Sum_probs=55.8
Q ss_pred HhHhhhhhcccCC--CCCCCCHHHHHHHHHhhCCCCC--HHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 405 AGLKEMFKAMDTD--NSGAITFDELKAGLRRYGSTLK--DTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 405 ~~l~~~F~~~D~d--~~G~I~~~el~~~l~~~~~~~~--~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
+.++.+|+.||.+ ++|+|+.+||+.+++.+|.+++ ..++..++..+|.|++|.|+|+||+.++...
T Consensus 5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~ 74 (76)
T d1qx2a_ 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence 4578888888665 4699999999999999886654 4579999999999999999999999987653
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.93 E-value=8.8e-10 Score=85.78 Aligned_cols=65 Identities=25% Similarity=0.455 Sum_probs=57.1
Q ss_pred HHHHHHHHHHh-CCCCC-CceeHHHHHHHHHhCC-------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYF-DKDGS-GYITVDELQQACAEHN-------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~-D~d~d-G~I~~~e~~~~l~~~~-------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+.+..+|..| |+||+ |.|+.+||+.+|...+ .+++++.++|..+|.|+||.|+|+||+.+|.++
T Consensus 8 i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l 81 (93)
T d1zfsa1 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 45688899988 88875 9999999999997642 578999999999999999999999999999765
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.89 E-value=8.2e-10 Score=87.21 Aligned_cols=62 Identities=21% Similarity=0.302 Sum_probs=50.0
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHHhCC-------C-----------CHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 479 LVAAFQYFDKDGSGYITVDELQQACAEHN-------M-----------TDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 479 l~~~F~~~D~d~dG~I~~~e~~~~l~~~~-------~-----------~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
++.+|+.+|.|+||+|+.+||..+++..+ . ....++.+|..+|.|+||.||++||++.+.+.
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~~ 97 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRK 97 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcC
Confidence 45779999999999999999988886421 0 12357889999999999999999999988653
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.88 E-value=9.2e-10 Score=85.15 Aligned_cols=64 Identities=22% Similarity=0.497 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC-------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN-------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~-------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+.+..+|..||.| +|.|+.+||+.++.... .++..++++|+.+|.|+||+|+|+||+.++.+.
T Consensus 8 ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 78 (92)
T d1a4pa_ 8 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (92)
T ss_dssp HHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence 46788999999977 89999999999997632 467789999999999999999999999999765
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.87 E-value=1.2e-09 Score=85.64 Aligned_cols=65 Identities=17% Similarity=0.385 Sum_probs=55.8
Q ss_pred HHHHHHHHHHh-CCCCC-CceeHHHHHHHHHhCC----CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYF-DKDGS-GYITVDELQQACAEHN----MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~-D~d~d-G~I~~~e~~~~l~~~~----~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+.+..+|..| |.+|+ |.|+..||+.+++..+ .+++.++++|..+|.|+||.|+|+||+.++.++
T Consensus 13 i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l 83 (98)
T d1yuta1 13 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 83 (98)
T ss_dssp HHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 35678889888 77875 9999999999998643 456679999999999999999999999999765
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.86 E-value=3.3e-09 Score=82.09 Aligned_cols=65 Identities=15% Similarity=0.425 Sum_probs=55.9
Q ss_pred HHHHHHHHHHh-CCCCCC-ceeHHHHHHHHHhC-------CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYF-DKDGSG-YITVDELQQACAEH-------NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~-D~d~dG-~I~~~e~~~~l~~~-------~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+.+..+|..| |.||+| .|+.+||+.+|... ..++++++++|+.+|.|+||.|+|+||+.+|.+.
T Consensus 8 i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l 81 (93)
T d3c1va1 8 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 81 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence 45678999998 666655 79999999999763 2688999999999999999999999999999765
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.86 E-value=7.2e-10 Score=85.75 Aligned_cols=70 Identities=16% Similarity=0.303 Sum_probs=59.5
Q ss_pred HHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhh-----CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc
Q 008475 401 EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRY-----GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN 471 (564)
Q Consensus 401 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-----~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~ 471 (564)
++.+..+..+|+.+|.| +|.|+.+||..++... +...+...++.+|+.+|.|+||+|+|+||..++..+.
T Consensus 5 E~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~ 79 (92)
T d1a4pa_ 5 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT 79 (92)
T ss_dssp HHHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHH
Confidence 34577899999999987 8999999999999863 3445677899999999999999999999998876543
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.86 E-value=1.7e-09 Score=84.18 Aligned_cols=70 Identities=20% Similarity=0.321 Sum_probs=60.1
Q ss_pred HHHHhHhhhhhcc-cCCCC-CCCCHHHHHHHHHhhC-----CCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc
Q 008475 402 EEIAGLKEMFKAM-DTDNS-GAITFDELKAGLRRYG-----STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN 471 (564)
Q Consensus 402 ~~~~~l~~~F~~~-D~d~~-G~I~~~el~~~l~~~~-----~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~ 471 (564)
..+..+.++|+.+ |.|++ |+|+.+||+.+|...+ .......++.+|..+|.|+||.|+|+||+.++..+.
T Consensus 6 ~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~ 82 (93)
T d1zfsa1 6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (93)
T ss_dssp HHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 4467889999987 88875 9999999999998764 345789999999999999999999999998876544
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.86 E-value=6e-10 Score=83.47 Aligned_cols=66 Identities=21% Similarity=0.450 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhCC-C-CCCceeHHHHHHHHHhC--C--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 475 REEHLVAAFQYFDK-D-GSGYITVDELQQACAEH--N--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 475 ~~~~l~~~F~~~D~-d-~dG~I~~~e~~~~l~~~--~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
..+.++.+|..||. + +.|+|+.+||+.+++.. + .+++++++++..+|.|+||.|+|+||+.+|.++
T Consensus 5 ~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 35678899999974 3 45899999999999875 2 456779999999999999999999999999764
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.85 E-value=4.2e-09 Score=82.05 Aligned_cols=62 Identities=21% Similarity=0.341 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
...++++|+.+| +++|.|+.+|++.++...|++.+++..++..+|.|+||.|+++||+.++.
T Consensus 9 ~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~ 70 (95)
T d2jxca1 9 KAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMF 70 (95)
T ss_dssp HHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCceeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence 456789999999 89999999999999999999999999999999999999999999976443
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.85 E-value=2.6e-09 Score=82.48 Aligned_cols=65 Identities=17% Similarity=0.309 Sum_probs=56.8
Q ss_pred HHHHHHHHHHh-CCCCCC-ceeHHHHHHHHHhC-----C--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYF-DKDGSG-YITVDELQQACAEH-----N--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~-D~d~dG-~I~~~e~~~~l~~~-----~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+.+..+|..| |++|+| .|+.+||+++|+.. + .++..+.++++.+|.|+||.|+|+||+.+|..+
T Consensus 8 i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l 81 (93)
T d1ksoa_ 8 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 81 (93)
T ss_dssp HHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 45677889988 999999 59999999999763 2 468899999999999999999999999999765
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.84 E-value=1.7e-09 Score=84.66 Aligned_cols=70 Identities=14% Similarity=0.246 Sum_probs=59.2
Q ss_pred HHHHhHhhhhhcc-cCCCC-CCCCHHHHHHHHHhhCC--CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc
Q 008475 402 EEIAGLKEMFKAM-DTDNS-GAITFDELKAGLRRYGS--TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN 471 (564)
Q Consensus 402 ~~~~~l~~~F~~~-D~d~~-G~I~~~el~~~l~~~~~--~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~ 471 (564)
+.+..+.++|+.| |.+++ |+|+..||+.+++..+. ..+...++.++..+|.|+||.|+|+||+.++..+.
T Consensus 11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l~ 84 (98)
T d1yuta1 11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELA 84 (98)
T ss_dssp HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 4567899999997 77875 99999999999987643 34566799999999999999999999999887553
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.84 E-value=3.5e-10 Score=84.80 Aligned_cols=69 Identities=19% Similarity=0.338 Sum_probs=57.8
Q ss_pred HHHHhHhhhhhcccC-C-CCCCCCHHHHHHHHHhh--CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 402 EEIAGLKEMFKAMDT-D-NSGAITFDELKAGLRRY--GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 402 ~~~~~l~~~F~~~D~-d-~~G~I~~~el~~~l~~~--~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
+....|+.+|+.||. + +.|+|+.+||+.+++.+ +...+..+++.++..+|.|+||.|+|+||+.++..+
T Consensus 4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 345678999999975 3 45899999999999986 445566779999999999999999999999888654
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.82 E-value=4.2e-09 Score=81.53 Aligned_cols=69 Identities=17% Similarity=0.333 Sum_probs=59.1
Q ss_pred HHHHhHhhhhhcc-cCCCCC-CCCHHHHHHHHHh-----hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 402 EEIAGLKEMFKAM-DTDNSG-AITFDELKAGLRR-----YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 402 ~~~~~l~~~F~~~-D~d~~G-~I~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
+.+..+.++|+.+ |.|++| +|+.+||+.+++. ++....+++++.+|..+|.|+||.|+|+||+.++..+
T Consensus 6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l 81 (93)
T d3c1va1 6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 81 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence 3467899999998 666655 6999999999986 3567789999999999999999999999999887654
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.81 E-value=3e-09 Score=83.57 Aligned_cols=61 Identities=15% Similarity=0.266 Sum_probs=57.3
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 478 HLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 478 ~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
...++|+.+|.+++|+|+.+|++.++...|++++++.++++.+|.|+||.|+++||+.+|.
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~ 72 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALR 72 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence 4568899999999999999999999999999999999999999999999999999987664
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.80 E-value=2.3e-09 Score=83.57 Aligned_cols=67 Identities=22% Similarity=0.353 Sum_probs=60.9
Q ss_pred hhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 399 LSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 399 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
+++++..++.++|..+| +++|+|+.+|+..+|...| ++..+++.+|..+|.+++|.|+++||..++.
T Consensus 4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~ 70 (95)
T d2jxca1 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMF 70 (95)
T ss_dssp SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence 67889999999999999 8999999999999998765 5788999999999999999999999976653
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.78 E-value=2.9e-09 Score=81.20 Aligned_cols=64 Identities=16% Similarity=0.324 Sum_probs=55.5
Q ss_pred HHHHHHHHHh-CCCCCCc-eeHHHHHHHHHh-CC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 477 EHLVAAFQYF-DKDGSGY-ITVDELQQACAE-HN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 477 ~~l~~~F~~~-D~d~dG~-I~~~e~~~~l~~-~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
+.+..+|..| |++|+|. ++.+||+.++.. ++ ++++.+++++.++|.|+||.|+|+||+.++.+.
T Consensus 10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l 78 (87)
T d1xk4a1 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (87)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 5677889888 8999996 589999999975 55 566779999999999999999999999999765
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.77 E-value=5.4e-09 Score=79.88 Aligned_cols=65 Identities=18% Similarity=0.446 Sum_probs=57.0
Q ss_pred HHHHHHHHHHh-CCCCCC-ceeHHHHHHHHHh---CC--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYF-DKDGSG-YITVDELQQACAE---HN--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~-D~d~dG-~I~~~e~~~~l~~---~~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...+..+|..| |++|+| .|+..||+.++.. .+ .+++.++++++.+|.|+||.|+|+||+.++.++
T Consensus 8 i~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l 79 (89)
T d1k8ua_ 8 IGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 79 (89)
T ss_dssp HHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 45677889888 999999 6999999999976 33 678889999999999999999999999999765
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.77 E-value=4.1e-09 Score=81.27 Aligned_cols=69 Identities=16% Similarity=0.305 Sum_probs=59.1
Q ss_pred HHHHhHhhhhhcc-cCCCCC-CCCHHHHHHHHHhhC-----CCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 402 EEIAGLKEMFKAM-DTDNSG-AITFDELKAGLRRYG-----STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 402 ~~~~~l~~~F~~~-D~d~~G-~I~~~el~~~l~~~~-----~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
+.+..+..+|+.+ |.+|+| +|+.+||+.+++... ......+++.+++.+|.|+||.|+|+||+.++..+
T Consensus 6 ~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l 81 (93)
T d1ksoa_ 6 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 81 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 4567788999997 999999 599999999998643 34568899999999999999999999999887654
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=3.4e-09 Score=84.92 Aligned_cols=63 Identities=24% Similarity=0.298 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHH
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~ 538 (564)
...+..+|+.+|+|++|+|+.+|++.+|...|++.+++.++++.+|.|+||.|+++||+.+|.
T Consensus 21 ~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~ 83 (110)
T d1iq3a_ 21 REYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccchhHHHHHHHHHhhccchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence 456789999999999999999999999998899999999999999999999999999986553
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.71 E-value=3.5e-09 Score=80.97 Aligned_cols=69 Identities=25% Similarity=0.435 Sum_probs=59.9
Q ss_pred HHHHhHhhhhhcc-cCCCCC-CCCHHHHHHHHHh---hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 402 EEIAGLKEMFKAM-DTDNSG-AITFDELKAGLRR---YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 402 ~~~~~l~~~F~~~-D~d~~G-~I~~~el~~~l~~---~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
..+..+..+|+.+ |++++| +|+..||+.+++. .+...++.+++.+++.+|.|+||.|+|+||+.++..+
T Consensus 6 ~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l 79 (89)
T d1k8ua_ 6 QAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 79 (89)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 4566788999998 999998 6999999999986 4556678889999999999999999999999887643
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.68 E-value=4e-09 Score=80.36 Aligned_cols=70 Identities=13% Similarity=0.301 Sum_probs=59.8
Q ss_pred HHHHHhHhhhhhcc-cCCCCCC-CCHHHHHHHHHh-hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 401 EEEIAGLKEMFKAM-DTDNSGA-ITFDELKAGLRR-YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 401 ~~~~~~l~~~F~~~-D~d~~G~-I~~~el~~~l~~-~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
+..+..+..+|+.+ |.+|+|. ++.+||+.++.. ++...++.+++.+++.+|.|+||.|+|+||+.++..+
T Consensus 6 E~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l 78 (87)
T d1xk4a1 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (87)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 34567788999998 8899986 599999999975 6766777889999999999999999999999987654
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.66 E-value=5.4e-09 Score=82.26 Aligned_cols=71 Identities=18% Similarity=0.317 Sum_probs=59.1
Q ss_pred hHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCC-------CCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc
Q 008475 400 SEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGS-------TLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN 471 (564)
Q Consensus 400 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-------~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~ 471 (564)
.++.+..+.++|+.+| +++|.|+..||+.+++.... ......++.+|+.+|.|+||.|+|+||+.++..+.
T Consensus 5 ~E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~ 82 (100)
T d1psra_ 5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDIA 82 (100)
T ss_dssp HHHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 4566778999999997 78999999999999987542 23445689999999999999999999999886543
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.65 E-value=2.4e-09 Score=85.85 Aligned_cols=69 Identities=23% Similarity=0.269 Sum_probs=61.7
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
.+++++.+.+.++|..+|+|++|+|+.+|+..+|...+ +...+++.+|..+|.+++|.|+++||..++.
T Consensus 15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~ 83 (110)
T d1iq3a_ 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhc--cchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence 46788899999999999999999999999999997755 5567899999999999999999999987654
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.64 E-value=1.1e-08 Score=80.45 Aligned_cols=64 Identities=19% Similarity=0.326 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC---------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN---------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~---------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...+..+|..|| +++|.|+..||+.+++... .++..|+++|..+|.|+||.|+|+||+.+|.++
T Consensus 9 i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 81 (100)
T d1psra_ 9 IIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 345667788887 7899999999999998753 244568999999999999999999999999765
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.62 E-value=3.8e-08 Score=74.48 Aligned_cols=69 Identities=19% Similarity=0.328 Sum_probs=56.6
Q ss_pred HHHHhHhhhhhcc-cCCCCC-CCCHHHHHHHHHhh-----CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 402 EEIAGLKEMFKAM-DTDNSG-AITFDELKAGLRRY-----GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 402 ~~~~~l~~~F~~~-D~d~~G-~I~~~el~~~l~~~-----~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
..+..+..+|+.+ +.++++ +|+.+||+.+++.. +....+..++.++..+|.|+||.|+|+||+.++..+
T Consensus 5 ~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l 80 (87)
T d1e8aa_ 5 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 80 (87)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 4567789999998 455554 69999999999863 234567889999999999999999999999887654
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.62 E-value=7.6e-08 Score=72.80 Aligned_cols=65 Identities=20% Similarity=0.459 Sum_probs=54.3
Q ss_pred HHHHHHHHHHh-CCCCCC-ceeHHHHHHHHHhC-----C--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYF-DKDGSG-YITVDELQQACAEH-----N--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~-D~d~dG-~I~~~e~~~~l~~~-----~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...+..+|..| +++|++ .|+.+||+.+++.. + .+++.++++|..+|.|+||.|+|+||+.++.+.
T Consensus 7 i~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l 80 (87)
T d1e8aa_ 7 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 80 (87)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 35677889988 556655 69999999999762 1 467899999999999999999999999998754
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.59 E-value=1.1e-07 Score=89.20 Aligned_cols=86 Identities=15% Similarity=0.067 Sum_probs=63.6
Q ss_pred ceeecccccccCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEEEEE
Q 008475 100 LYTLGRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVHIVM 179 (564)
Q Consensus 100 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 179 (564)
.|++.+..+.++.+.||+.. ..+..+++|+....... ....+.+|...++.+..+--+.+++.+...++..++||
T Consensus 15 ~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~---~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~ 89 (263)
T d1j7la_ 15 KYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp TSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred ceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCccc---chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEE
Confidence 46666666556668999876 46667889987644321 22346789999998876666788999888889999999
Q ss_pred eccCCCchHHH
Q 008475 180 ELCAGGELFDR 190 (564)
Q Consensus 180 e~~~~~~L~~~ 190 (564)
++++|.++.+.
T Consensus 90 ~~l~G~~~~~~ 100 (263)
T d1j7la_ 90 SEADGVLCSEE 100 (263)
T ss_dssp ECCSSEEHHHH
T ss_pred Eeccccccccc
Confidence 99998777543
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=1.7e-08 Score=79.42 Aligned_cols=79 Identities=16% Similarity=0.139 Sum_probs=49.4
Q ss_pred HhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhchhhHHHHHHHHHHHh
Q 008475 407 LKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYF 486 (564)
Q Consensus 407 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~ 486 (564)
++.+|..+|.|++|+|+.+||..+++.++. .......+..+.. ......+..+..+|+.+
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~------------~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~~~ 77 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELE------------KVYDPKNEEDDMR--------EMEEERLRMREHVMKNV 77 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHH------------TTSCCSSCSSHHH--------HTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHH------------hcchhhhhhhhhh--------hhHHHHHHHHHHHHHHc
Confidence 577899999999999999999998865321 1111111111000 01112344567778888
Q ss_pred CCCCCCceeHHHHHHHHHh
Q 008475 487 DKDGSGYITVDELQQACAE 505 (564)
Q Consensus 487 D~d~dG~I~~~e~~~~l~~ 505 (564)
|.|+||.|+.+||.++++.
T Consensus 78 D~d~DG~Is~~EF~~~~~~ 96 (99)
T d1snla_ 78 DTNQDRLVTLEEFLASTQR 96 (99)
T ss_dssp CSSCSSEEEHHHHHHHHHC
T ss_pred CCCCCCcCcHHHHHHHHhc
Confidence 8888888888888777653
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.55 E-value=7.6e-09 Score=90.38 Aligned_cols=118 Identities=5% Similarity=-0.017 Sum_probs=80.9
Q ss_pred HHHHHHh--cCCCCCCccchhhhHHHHhhhchh--hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHH
Q 008475 443 IRDLMDA--ADVDNSGTIDYGEFIAATVHLNKL--EREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIR 518 (564)
Q Consensus 443 ~~~~~~~--~D~~~~g~I~~~eF~~~~~~~~~~--~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~ 518 (564)
++++|.. +|.|++|+|+.+|+..++...... .....+..+|...|.+++|.|+++||..+++.+. ...++..+|.
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~-~r~ei~~~F~ 85 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC-PRPEIDEIFT 85 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS-CCHHHHTTCC
T ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC-CHHHHHHHHH
Confidence 4455554 699999999999998877543222 2334566678889999999999999999998764 4567899999
Q ss_pred HhCCCCCcceeHHHHHHHHHcCCC----------CCChHHHHHHHhHHccCCC
Q 008475 519 EVDQDNDGRIDYGEFVAMMQKGNV----------GLGRRTMRNSLNMSMRDAP 561 (564)
Q Consensus 519 ~~d~d~dg~I~~~eF~~~~~~~~~----------~~~~~~~~~~f~~~D~~~~ 561 (564)
.+|.|++|.||.+||...+..--. ..+.+.+..++..++.+.+
T Consensus 86 ~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~ 138 (170)
T d2zkmx1 86 SYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGI 138 (170)
T ss_dssp --------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--
T ss_pred HHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccc
Confidence 999999999999999999975421 2345667888888877765
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.50 E-value=5.8e-08 Score=75.99 Aligned_cols=61 Identities=25% Similarity=0.396 Sum_probs=54.9
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
.+.++|+.+|.+++|+|+.+|+..++...+ ++..++..+|..+|.+++|.|+++||..++.
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~ 72 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALR 72 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence 466899999999999999999999998755 5799999999999999999999999987654
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.40 E-value=9e-08 Score=56.91 Aligned_cols=32 Identities=44% Similarity=0.776 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC
Q 008475 476 EEHLVAAFQYFDKDGSGYITVDELQQACAEHN 507 (564)
Q Consensus 476 ~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~ 507 (564)
++.+++||+.||+|++|+|+.+||+.+|+.+|
T Consensus 2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 46789999999999999999999999998765
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.31 E-value=8.7e-07 Score=67.05 Aligned_cols=69 Identities=19% Similarity=0.373 Sum_probs=55.3
Q ss_pred HHHHhHhhhhhccc-CCCC-CCCCHHHHHHHHHh-h----CCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 402 EEIAGLKEMFKAMD-TDNS-GAITFDELKAGLRR-Y----GSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 402 ~~~~~l~~~F~~~D-~d~~-G~I~~~el~~~l~~-~----~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
..+..+-.+|+.+. .+|+ +++++.||+.+++. + +....+..++.+|+.+|.|+||.|+|+||+.++..+
T Consensus 6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (90)
T d3cr5x1 6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI 81 (90)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 44567888999974 4454 57999999999986 3 334457779999999999999999999998877654
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.18 E-value=3.2e-06 Score=63.82 Aligned_cols=65 Identities=20% Similarity=0.442 Sum_probs=53.4
Q ss_pred HHHHHHHHHHh-CCCCC-CceeHHHHHHHHHh-C----C--CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYF-DKDGS-GYITVDELQQACAE-H----N--MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~-D~d~d-G~I~~~e~~~~l~~-~----~--~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...+..+|..| +++|+ +.++..||+.++.. + + .++..++++|+.+|.|+||.|+|+||+.++.++
T Consensus 8 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (90)
T d3cr5x1 8 VVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI 81 (90)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 34577889988 45555 57999999999975 2 2 356789999999999999999999999998755
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.15 E-value=3.2e-06 Score=83.77 Aligned_cols=82 Identities=12% Similarity=0.105 Sum_probs=52.2
Q ss_pred cccccccCCeEEEEEEEccCCcEEEEEEeccccCC----CHHhHHHHHHHHHHHHhhcCC--CCccEEEEEEecCCeEEE
Q 008475 104 GRKLGQGQFGTTYLCTEIATGIEFACKSISKRKLI----SREDVEDVRREIQIMHHLAGH--KNIVTIKGAYEDSLCVHI 177 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~~l 177 (564)
.+.||.|....||++.+..+++.|++|.-...... ......+...|...|+.+..+ ..+++++.+ +....++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 44689999999999997777888999975421110 112234566788888877644 345666654 3445578
Q ss_pred EEeccCCCch
Q 008475 178 VMELCAGGEL 187 (564)
Q Consensus 178 v~e~~~~~~L 187 (564)
|||++.+..+
T Consensus 109 vmE~L~~~~~ 118 (392)
T d2pula1 109 VMEDLSHLKI 118 (392)
T ss_dssp EECCCTTSEE
T ss_pred EEeccCCccc
Confidence 9999977544
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.10 E-value=1.6e-06 Score=66.15 Aligned_cols=70 Identities=20% Similarity=0.291 Sum_probs=55.8
Q ss_pred HHHHhHhhhhhcccC-CCC-CCCCHHHHHHHHHh-----hCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc
Q 008475 402 EEIAGLKEMFKAMDT-DNS-GAITFDELKAGLRR-----YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN 471 (564)
Q Consensus 402 ~~~~~l~~~F~~~D~-d~~-G~I~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~ 471 (564)
..+..+-.+|+.+.. +|+ ++++..||+.++.. ++.......++.+++.+|.|+||.|+|+||+.++..+.
T Consensus 6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~la 82 (95)
T d1qlsa_ 6 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGLA 82 (95)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 345678889988744 454 68999999999975 34445677899999999999999999999988876543
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.08 E-value=1.7e-06 Score=48.84 Aligned_cols=32 Identities=41% Similarity=0.717 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008475 475 REEHLVAAFQYFDKDGSGYITVDELQQACAEH 506 (564)
Q Consensus 475 ~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~ 506 (564)
.++.+..+|+.+|+|.||+|+.+||..+++..
T Consensus 2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~t 33 (34)
T d1ctda_ 2 SEEELANAFRIFDKNADGYIDIEELGEILRAT 33 (34)
T ss_dssp HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHccCCcccccHHHHHHHHHhc
Confidence 35678888999999999999999998888754
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.06 E-value=9.2e-07 Score=52.44 Aligned_cols=31 Identities=29% Similarity=0.568 Sum_probs=28.0
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhhC
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRYG 435 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~ 435 (564)
+.++++|+.||+|++|+|+..||+.+++.+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 3689999999999999999999999998765
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.05 E-value=2.8e-06 Score=64.71 Aligned_cols=69 Identities=19% Similarity=0.367 Sum_probs=52.0
Q ss_pred HHHHhHhhhhhccc-CCCC-CCCCHHHHHHHHHh-hC----CCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhh
Q 008475 402 EEIAGLKEMFKAMD-TDNS-GAITFDELKAGLRR-YG----STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHL 470 (564)
Q Consensus 402 ~~~~~l~~~F~~~D-~d~~-G~I~~~el~~~l~~-~~----~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~ 470 (564)
..+..+-.+|+.+. .+++ +++++.||+.+++. +. ....+..++.++..+|.|+||.|+|+||+.++..+
T Consensus 6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (94)
T d1j55a_ 6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (94)
T ss_dssp HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 34567888999974 3343 58999999999985 43 23335679999999999999999999999887554
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.01 E-value=4.7e-06 Score=63.44 Aligned_cols=65 Identities=26% Similarity=0.449 Sum_probs=52.8
Q ss_pred HHHHHHHHHHh-CCCCC-CceeHHHHHHHHHh-C------CCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYF-DKDGS-GYITVDELQQACAE-H------NMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~-D~d~d-G~I~~~e~~~~l~~-~------~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...+..+|..| .++|+ +.++..||+.++.. + .-.++.++++|+.+|.|+||.|+|+||+.++..+
T Consensus 8 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l 81 (95)
T d1qlsa_ 8 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 81 (95)
T ss_dssp HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 34567889887 45565 67999999999964 1 1456789999999999999999999999998765
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.91 E-value=2.2e-06 Score=68.86 Aligned_cols=90 Identities=11% Similarity=0.203 Sum_probs=68.8
Q ss_pred CCCHHHHHHHHhhhhhhHHHHHHHHHhhhhhhHHHHHhHhhhhhccc---CCCCCCCCHHHHHHHHHhhCC--CCCHHHH
Q 008475 369 SLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMD---TDNSGAITFDELKAGLRRYGS--TLKDTEI 443 (564)
Q Consensus 369 ~~~~~~~~~~k~~~~~n~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D---~d~~G~I~~~el~~~l~~~~~--~~~~~~~ 443 (564)
.++++-+.++.+.+ +|+..+++.+++.|+... .+.+|.|+.++|+.++..+.. ..++.-+
T Consensus 7 ~l~p~~l~~L~~~T---------------~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~ 71 (118)
T d1tuza_ 7 LISPSDFAQLQKYM---------------EYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLS 71 (118)
T ss_dssp CSCHHHHHHHHHHH---------------HHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHH
T ss_pred CCCHHHHHHHHHHc---------------CCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHH
Confidence 36666666665433 688899999999997653 257899999999999987643 2456778
Q ss_pred HHHHHhcCCCCC--------CccchhhhHHHHhhhchh
Q 008475 444 RDLMDAADVDNS--------GTIDYGEFIAATVHLNKL 473 (564)
Q Consensus 444 ~~~~~~~D~~~~--------g~I~~~eF~~~~~~~~~~ 473 (564)
+.+|..+|.+++ |.|+|.||+..++-+...
T Consensus 72 ~rlF~~FD~~~d~~~~~~~~g~I~f~efv~~LS~l~~G 109 (118)
T d1tuza_ 72 LALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLLEGG 109 (118)
T ss_dssp HHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHHHSC
T ss_pred HHHHHHHccccccccccCCCceeeHHHHHHHHHHHcCC
Confidence 899999998876 889999999887765443
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=97.89 E-value=1.4e-05 Score=59.02 Aligned_cols=67 Identities=18% Similarity=0.335 Sum_probs=52.0
Q ss_pred HHHHhHhhhhhcccC-CC-CCCCCHHHHHHHHHh-hCCCC-----CHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 402 EEIAGLKEMFKAMDT-DN-SGAITFDELKAGLRR-YGSTL-----KDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 402 ~~~~~l~~~F~~~D~-d~-~G~I~~~el~~~l~~-~~~~~-----~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
..+..+-.+|+.+.. +| .++++..||+.+++. ++..+ ....++.+++.+|.|+||.|+|+||+.++.
T Consensus 7 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 7 RNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence 345567889999854 33 358999999999985 44322 345589999999999999999999988764
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.88 E-value=1.7e-05 Score=73.16 Aligned_cols=74 Identities=9% Similarity=0.058 Sum_probs=52.4
Q ss_pred ccccC-CeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCC-CccEEEEEEecCCeEEEEEeccCC
Q 008475 107 LGQGQ-FGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHK-NIVTIKGAYEDSLCVHIVMELCAG 184 (564)
Q Consensus 107 lG~G~-fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~-niv~~~~~~~~~~~~~lv~e~~~~ 184 (564)
+..|. -+.||+... ..+..+++|...... ...+..|...++.|..+. .+++++.+..+.+..++||++++|
T Consensus 18 ~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G 90 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG 90 (255)
T ss_dssp CSCTTSSCEEEEEEC-TTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred cCCcccCCeEEEEEe-CCCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence 34444 468998874 456678889765332 224677888888877432 267788888888899999999988
Q ss_pred Cch
Q 008475 185 GEL 187 (564)
Q Consensus 185 ~~L 187 (564)
.++
T Consensus 91 ~~~ 93 (255)
T d1nd4a_ 91 QDL 93 (255)
T ss_dssp EET
T ss_pred ccc
Confidence 655
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=97.88 E-value=1.7e-05 Score=60.17 Aligned_cols=65 Identities=17% Similarity=0.415 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhC-CCCC-CceeHHHHHHHHHh-CC------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 476 EEHLVAAFQYFD-KDGS-GYITVDELQQACAE-HN------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 476 ~~~l~~~F~~~D-~d~d-G~I~~~e~~~~l~~-~~------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
...+..+|..|. .+|+ +.++..||+.++.. ++ .+++.++++|..+|.|+||.|+|+||+.++..+
T Consensus 8 i~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (94)
T d1j55a_ 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (94)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 345778899984 4444 58999999999975 22 245679999999999999999999999998754
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=97.81 E-value=4.1e-05 Score=56.52 Aligned_cols=64 Identities=19% Similarity=0.491 Sum_probs=50.8
Q ss_pred HHHHHHHHHHhC-CCC-CCceeHHHHHHHHHh-CC-------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHc
Q 008475 476 EEHLVAAFQYFD-KDG-SGYITVDELQQACAE-HN-------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQK 539 (564)
Q Consensus 476 ~~~l~~~F~~~D-~d~-dG~I~~~e~~~~l~~-~~-------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~ 539 (564)
...+..+|..|. ++| .+.++..||+.++.. ++ -.+..++++|...|.|+||.|+|+||+.++.+
T Consensus 9 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 82 (83)
T d1xk4c1 9 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 82 (83)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence 345678899884 343 368999999999975 32 24556899999999999999999999998854
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.65 E-value=2.6e-05 Score=43.95 Aligned_cols=30 Identities=30% Similarity=0.457 Sum_probs=26.4
Q ss_pred HhHhhhhhcccCCCCCCCCHHHHHHHHHhh
Q 008475 405 AGLKEMFKAMDTDNSGAITFDELKAGLRRY 434 (564)
Q Consensus 405 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 434 (564)
+.|.+.|+.||+|.||+|+.+||..+++.-
T Consensus 4 eELae~FRifDkNaDGyiD~eEl~~ilr~t 33 (34)
T d1ctda_ 4 EELANAFRIFDKNADGYIDIEELGEILRAT 33 (34)
T ss_dssp HHHHHHHHTTCCSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCcccccHHHHHHHHHhc
Confidence 457889999999999999999999998764
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.16 E-value=0.00057 Score=67.15 Aligned_cols=75 Identities=12% Similarity=0.101 Sum_probs=52.5
Q ss_pred cccccccCCeEEEEEEEcc-------CCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCccEEEEEEecCCeEE
Q 008475 104 GRKLGQGQFGTTYLCTEIA-------TGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLCVH 176 (564)
Q Consensus 104 ~~~lG~G~fg~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 176 (564)
++.|+.|-.-.+|++.... .+..|.+++..... . .....+|..+++.+..+.-.+++++++.. +
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~--~---~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g 117 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--T---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 117 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc--h---hhHHHHHHHHHHHHHhCCCCCeEEEEcCC----c
Confidence 3568889999999998643 23567777664211 1 22345799999999866656788888754 5
Q ss_pred EEEeccCCCch
Q 008475 177 IVMELCAGGEL 187 (564)
Q Consensus 177 lv~e~~~~~~L 187 (564)
+||||++|..|
T Consensus 118 ~I~efi~g~~l 128 (395)
T d1nw1a_ 118 RLEEYIPSRPL 128 (395)
T ss_dssp EEECCCCEEEC
T ss_pred eEEEEeccccC
Confidence 89999987544
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.16 E-value=0.00024 Score=56.48 Aligned_cols=51 Identities=8% Similarity=0.015 Sum_probs=26.3
Q ss_pred CCCceeHHHHHHHHHhC---C-CCHHHHHHHHHHhCCCCC--------cceeHHHHHHHHHcC
Q 008475 490 GSGYITVDELQQACAEH---N-MTDVLLEDIIREVDQDND--------GRIDYGEFVAMMQKG 540 (564)
Q Consensus 490 ~dG~I~~~e~~~~l~~~---~-~~~~~~~~~~~~~d~d~d--------g~I~~~eF~~~~~~~ 540 (564)
.+|.|+.++|+.++... | .+...++.+|..+|.++| |.|++.||+..+.-+
T Consensus 44 p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv~~LS~l 106 (118)
T d1tuza_ 44 QGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLL 106 (118)
T ss_dssp ETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHHHHHHHHH
Confidence 34555555555554432 2 234445555555555544 666666666655433
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.96 E-value=0.0013 Score=62.68 Aligned_cols=69 Identities=12% Similarity=0.101 Sum_probs=45.4
Q ss_pred cCCeEEEEEEEccCCcEEEEEEeccccCCCHHhHHHHHHHHHHHHhhcCCCCc--cEEE-----EEEecCCeEEEEEecc
Q 008475 110 GQFGTTYLCTEIATGIEFACKSISKRKLISREDVEDVRREIQIMHHLAGHKNI--VTIK-----GAYEDSLCVHIVMELC 182 (564)
Q Consensus 110 G~fg~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni--v~~~-----~~~~~~~~~~lv~e~~ 182 (564)
+.--.||++.. .+|..|++|+..... ...+++..|...+..|..+ .| +..+ ..+......+.+++++
T Consensus 33 s~EN~vy~v~~-~dg~~~VlK~~rp~~----~s~~~i~~E~~~l~~L~~~-gipv~~p~~~~g~~~~~~~~~~~~l~~~~ 106 (325)
T d1zyla1 33 SYENRVYQFQD-EDRRRFVVKFYRPER----WTADQILEEHQFALQLVND-EVPVAAPVAFNGQTLLNHQGFYFAVFPSV 106 (325)
T ss_dssp CSSSEEEEECC-TTCCCEEEEEECTTT----SCHHHHHHHHHHHHHHHHT-TCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred cccceeEEEEc-CCCCEEEEEEeCCCC----CCHHHHHHHHHHHHHHHhc-CCCCCCceecCCCeeeeeeeEEEEEEeec
Confidence 44468999984 678899999875432 1245677899999888732 22 1111 1123466788999999
Q ss_pred CC
Q 008475 183 AG 184 (564)
Q Consensus 183 ~~ 184 (564)
+|
T Consensus 107 ~G 108 (325)
T d1zyla1 107 GG 108 (325)
T ss_dssp CC
T ss_pred CC
Confidence 77
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.84 E-value=0.00022 Score=58.49 Aligned_cols=65 Identities=20% Similarity=0.201 Sum_probs=48.7
Q ss_pred HHHHHHHHhCCC-CCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcCCC
Q 008475 478 HLVAAFQYFDKD-GSGYITVDELQQACAEHNMTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKGNV 542 (564)
Q Consensus 478 ~l~~~F~~~D~d-~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~~~ 542 (564)
.+...|..+|.| .||.|+..|+..+...+-..+.=+..+|...|.|+||.||+.||...+.-...
T Consensus 78 ~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~v~~~ 143 (151)
T d1sraa_ 78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQK 143 (151)
T ss_dssp HHHHHHHHHCCTTCSSEECTTTTGGGGSTTSTTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTCCGG
T ss_pred cceeehhhcCCCCCCCccCHHHHHHHHHhhcCCchHHHHHHHHhcCCCCCcCCHHHHHHHcCCChh
Confidence 455669999998 59999999988765433223333678899999999999999999988864433
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.89 E-value=0.00093 Score=54.61 Aligned_cols=66 Identities=18% Similarity=0.221 Sum_probs=46.7
Q ss_pred HHHHHHhcCCC-CCCccchhhhHHHHhhhchhhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHH
Q 008475 443 IRDLMDAADVD-NSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL 513 (564)
Q Consensus 443 ~~~~~~~~D~~-~~g~I~~~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~ 513 (564)
+.-.|..+|.| .||.++-.|...+...+ ...+..++..|+..|.|+||.|+..||..+| |+.++++
T Consensus 79 v~W~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf---~v~~~~~ 145 (151)
T d1sraa_ 79 VHWQFGQLDQHPIDGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWAGCF---GIKQKDI 145 (151)
T ss_dssp HHHHHHHHCCTTCSSEECTTTTGGGGSTT--STTGGGHHHHHHHHCTTCSSSEEHHHHHHHT---TCCGGGC
T ss_pred ceeehhhcCCCCCCCccCHHHHHHHHHhh--cCCchHHHHHHHHhcCCCCCcCCHHHHHHHc---CCChhhc
Confidence 45578888888 48888888876643222 2345556777888899999999999998777 4555443
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.10 E-value=0.019 Score=53.71 Aligned_cols=31 Identities=32% Similarity=0.373 Sum_probs=25.9
Q ss_pred CCCEeecCCCCcEEeecCCCCCcEEEeeCCCccc
Q 008475 219 LGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF 252 (564)
Q Consensus 219 ~~iiH~Dlkp~NIll~~~~~~~~~kl~DfG~~~~ 252 (564)
.|+||+|+.++||++ +++...-|+||+.+..
T Consensus 183 ~giIHgDl~~dNvl~---~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 183 AGVIHADLFQDNVFF---LGDELSGLIDFYFACN 213 (316)
T ss_dssp EEEECSCCCGGGEEE---ETTEEEEECCCTTCEE
T ss_pred cccccCCcchhhhhc---ccccceeEeccccccc
Confidence 469999999999999 5555668999998764
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.01 E-value=0.067 Score=39.87 Aligned_cols=63 Identities=11% Similarity=0.180 Sum_probs=50.8
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHhC-C---CCHHHHHHHHHHhCCCC----CcceeHHHHHHHHHcC
Q 008475 477 EHLVAAFQYFDKDGSGYITVDELQQACAEH-N---MTDVLLEDIIREVDQDN----DGRIDYGEFVAMMQKG 540 (564)
Q Consensus 477 ~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~-~---~~~~~~~~~~~~~d~d~----dg~I~~~eF~~~~~~~ 540 (564)
..+..+|..|-. +.+.++.++|.++|... + ++.+.+.++|..+..+. .+.++++.|..+|...
T Consensus 8 ~ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~ 78 (94)
T d1qasa1 8 AEIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA 78 (94)
T ss_dssp HHHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSS
T ss_pred HHHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCc
Confidence 457788988853 45689999999999874 2 67888999999997763 3679999999999866
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=93.40 E-value=0.17 Score=33.46 Aligned_cols=73 Identities=18% Similarity=0.261 Sum_probs=60.3
Q ss_pred hhhHHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhc-CCCCCC-ccchhhhHHHHhhh
Q 008475 398 SLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAA-DVDNSG-TIDYGEFIAATVHL 470 (564)
Q Consensus 398 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~-D~~~~g-~I~~~eF~~~~~~~ 470 (564)
.+.+++......+|..||.+....-...+--.+|..+|....+.+.+.+++.. .+.||. .|.-+|++.+++..
T Consensus 7 algpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcskw 81 (86)
T d1j7qa_ 7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKW 81 (86)
T ss_dssp CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHHH
T ss_pred ccCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHHH
Confidence 45677888889999999999998888899999999999999999999888865 344443 58899999887653
|
| >d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: alpha-Actinin species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.34 E-value=0.12 Score=35.73 Aligned_cols=60 Identities=20% Similarity=0.399 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCCCCHHHHHHHHHHhCC-----CCCcceeHHHHHHHHH
Q 008475 473 LEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLLEDIIREVDQ-----DNDGRIDYGEFVAMMQ 538 (564)
Q Consensus 473 ~~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~~~~~~~~~~~~~~d~-----d~dg~I~~~eF~~~~~ 538 (564)
..+.+.+..+|+.+- ++..+||.+||++.| +.++++.++..+-. ...|..+|..|++.+-
T Consensus 4 ~~TaEqv~~aFr~lA-~~KpyVT~~dL~~~L-----~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~ 68 (73)
T d1h8ba_ 4 TDTAEQVIASFRILA-SDKPYILAEELRREL-----PPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 68 (73)
T ss_dssp CSTHHHHHHHHHHHT-TSCSSBCHHHHHHHS-----CHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred cccHHHHHHHHHHHh-CCCCeeCHHHHHhhc-----CHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHh
Confidence 345678899999994 678899999998776 78889999988843 2367899999998764
|
| >d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Protein cgi-38 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.91 E-value=2.5 Score=33.16 Aligned_cols=60 Identities=17% Similarity=0.316 Sum_probs=45.6
Q ss_pred HHHHHhCC-CCCC-ceeHHHHHHHHHhCC------CCHHHHHHHHHHhCCCCCcceeHHHHHHHHHcC
Q 008475 481 AAFQYFDK-DGSG-YITVDELQQACAEHN------MTDVLLEDIIREVDQDNDGRIDYGEFVAMMQKG 540 (564)
Q Consensus 481 ~~F~~~D~-d~dG-~I~~~e~~~~l~~~~------~~~~~~~~~~~~~d~d~dg~I~~~eF~~~~~~~ 540 (564)
.+|..|.. ..+| .|+...|.++|++.+ ++..+++-+|...-.-+...|+|++|+..|...
T Consensus 15 ~~F~~fG~~k~~~~~m~~~~f~K~~kd~~lid~K~~T~t~~diiF~k~k~k~~r~i~f~~F~~aL~~i 82 (138)
T d1wlma1 15 RKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEEL 82 (138)
T ss_dssp HHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHT
T ss_pred HHHHhcCCCCCCcccCCHHHHHHHHHHcCCCcCCccchhhHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 44555542 1233 499999999999854 677889999999876667899999999888765
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=88.59 E-value=1.2 Score=29.26 Aligned_cols=67 Identities=19% Similarity=0.311 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCC--CCHHHHHHHHHHhC-CCCC-cceeHHHHHHHHHcC
Q 008475 474 EREEHLVAAFQYFDKDGSGYITVDELQQACAEHN--MTDVLLEDIIREVD-QDND-GRIDYGEFVAMMQKG 540 (564)
Q Consensus 474 ~~~~~l~~~F~~~D~d~dG~I~~~e~~~~l~~~~--~~~~~~~~~~~~~d-~d~d-g~I~~~eF~~~~~~~ 540 (564)
...+...++|..||++....-...+-.++|..+| .+..+.+.++.+.- ..|| ..|.-+||+.+..++
T Consensus 11 eekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcskw 81 (86)
T d1j7qa_ 11 EEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKW 81 (86)
T ss_dssp THHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHHH
Confidence 3456678899999999999999999999999888 67888888888763 2333 468889999988776
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=85.39 E-value=0.53 Score=34.61 Aligned_cols=61 Identities=8% Similarity=0.135 Sum_probs=38.8
Q ss_pred hHhhhhhcccCCCCCCCCHHHHHHHHHhhC--CCCCHHHHHHHHHhcCCCC----CCccchhhhHHHH
Q 008475 406 GLKEMFKAMDTDNSGAITFDELKAGLRRYG--STLKDTEIRDLMDAADVDN----SGTIDYGEFIAAT 467 (564)
Q Consensus 406 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~--~~~~~~~~~~~~~~~D~~~----~g~I~~~eF~~~~ 467 (564)
.|..+|..+-. +.+.++.++|..+|..-. ...+...+..++..+.++. .|.++++.|...+
T Consensus 9 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL 75 (94)
T d1qasa1 9 EIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYL 75 (94)
T ss_dssp HHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHH
Confidence 45666666633 345788888888887643 2356666777777775542 3557777776654
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=85.21 E-value=0.2 Score=34.83 Aligned_cols=50 Identities=16% Similarity=0.132 Sum_probs=31.6
Q ss_pred cCCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 415 DTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 415 D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
|.|+||.|+..++..+++.+...... .-+...|.++||.|+..++..+..
T Consensus 8 DvN~DG~Vd~~D~~~~~~~i~~~~~~----~~~~~aDvn~DG~Id~~D~~~l~~ 57 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRYVLRSGIS----INTDNADLNEDGRVNSTDLGILKR 57 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHHHHCSCSC----CCGGGTCSSSSSSCSSHHHHHHHH
T ss_pred ccCCCCCCcHHHHHHHHHHHcCCCCc----CCCcceecCCCCCcCHHHHHHHHH
Confidence 77888888888887777764222111 112356777888888777765543
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=84.25 E-value=0.4 Score=31.83 Aligned_cols=20 Identities=20% Similarity=0.152 Sum_probs=9.5
Q ss_pred HHHhCCCCCCceeHHHHHHH
Q 008475 483 FQYFDKDGSGYITVDELQQA 502 (564)
Q Consensus 483 F~~~D~d~dG~I~~~e~~~~ 502 (564)
|...|.|+||.|+..++..+
T Consensus 32 ~~aaDvn~Dg~i~i~D~~~l 51 (59)
T d2cclb1 32 KARADVDKNGSINAADVLLL 51 (59)
T ss_dssp HHHHCTTCSSCCSHHHHHHH
T ss_pred hhccccCCCCCCCHHHHHHH
Confidence 34445555555555444433
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
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class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=81.83 E-value=1.3 Score=29.12 Aligned_cols=50 Identities=30% Similarity=0.431 Sum_probs=38.6
Q ss_pred cCCCCCCCCHHHHHHHHHhh-CC-CCCHHHHHHHHHhcCCCCCCccchhhhHHHHh
Q 008475 415 DTDNSGAITFDELKAGLRRY-GS-TLKDTEIRDLMDAADVDNSGTIDYGEFIAATV 468 (564)
Q Consensus 415 D~d~~G~I~~~el~~~l~~~-~~-~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~ 468 (564)
|.|++|.|+..++..+.+.+ +. .++. .-+...|.++||.|+..+...+..
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~~~----~~~~aaDvn~Dg~i~i~D~~~l~~ 53 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITLTD----DAKARADVDKNGSINAADVLLLSR 53 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCH----HHHHHHCTTCSSCCSHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCCh----hhhhccccCCCCCCCHHHHHHHHH
Confidence 78999999999999988764 32 3343 245678999999999988876554
|
| >d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Hypothetical protein c32e8.3 species: Caenorhabditis elegans [TaxId: 6239]
Probab=81.42 E-value=6.8 Score=28.76 Aligned_cols=70 Identities=9% Similarity=0.104 Sum_probs=52.7
Q ss_pred HHHHHhHhhhhhcccCCCCCCCCHHHHHHHHHhhC----CCCCHHHHHHHHHhcCCCCCCccchhhhHHHHhhhc
Q 008475 401 EEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG----STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLN 471 (564)
Q Consensus 401 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~----~~~~~~~~~~~~~~~D~~~~g~I~~~eF~~~~~~~~ 471 (564)
..+++...+.|..|-.-.+-.++...|..+++..+ ..++..+++.+|..+-..+ ..|+|++|..++..+.
T Consensus 4 ~~~l~~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k~-~ri~f~~F~~aL~~lA 77 (103)
T d1pula1 4 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPK-KKATFDETKKVLAFVA 77 (103)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCSS-SCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCCC-CCcCHHHHHHHHHHHH
Confidence 45677778888888533334699999999998732 4688999999999986544 4699999988776543
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