Query 008476
Match_columns 564
No_of_seqs 439 out of 2850
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 04:28:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008476.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008476hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nva_A CTP synthase; rossman f 100.0 4E-198 1E-202 1592.6 40.7 529 1-548 3-534 (535)
2 1vco_A CTP synthetase; tetrame 100.0 1E-163 4E-168 1341.7 40.3 530 1-550 12-547 (550)
3 1s1m_A CTP synthase; CTP synth 100.0 6E-162 2E-166 1327.0 40.4 526 1-549 3-539 (545)
4 2c5m_A CTP synthase; cytidine 100.0 4E-145 1E-149 1070.6 19.9 272 1-272 23-294 (294)
5 2vo1_A CTP synthase 1; pyrimid 100.0 2E-143 8E-148 1066.5 18.5 273 1-273 23-295 (295)
6 2v4u_A CTP synthase 2; pyrimid 100.0 1.6E-47 5.6E-52 392.4 21.4 266 283-549 11-277 (289)
7 2w7t_A CTP synthetase, putativ 100.0 1.5E-44 5.2E-49 367.5 20.0 246 297-551 8-259 (273)
8 1a9x_B Carbamoyl phosphate syn 100.0 1.9E-41 6.4E-46 358.8 14.1 292 180-549 53-376 (379)
9 3fij_A LIN1909 protein; 11172J 100.0 4.9E-28 1.7E-32 243.2 18.7 212 297-552 4-246 (254)
10 2a9v_A GMP synthase; structura 99.9 3.3E-25 1.1E-29 216.9 17.9 189 296-549 12-202 (212)
11 1qdl_B Protein (anthranilate s 99.9 1.3E-24 4.5E-29 209.5 18.6 181 300-544 4-193 (195)
12 1wl8_A GMP synthase [glutamine 99.9 2.5E-24 8.4E-29 206.1 16.2 184 299-548 2-188 (189)
13 4gud_A Imidazole glycerol phos 99.9 4.5E-25 1.5E-29 214.3 10.8 199 299-549 4-207 (211)
14 2vpi_A GMP synthase; guanine m 99.9 1.4E-24 4.7E-29 213.7 11.9 186 298-547 25-211 (218)
15 1l9x_A Gamma-glutamyl hydrolas 99.9 2E-24 7E-29 223.6 13.7 205 297-550 30-280 (315)
16 2ywj_A Glutamine amidotransfer 99.9 1.3E-23 4.4E-28 200.4 11.9 183 298-548 1-185 (186)
17 3r75_A Anthranilate/para-amino 99.9 4.7E-23 1.6E-27 231.5 14.7 182 297-550 446-637 (645)
18 1i1q_B Anthranilate synthase c 99.9 5.6E-22 1.9E-26 190.5 19.1 188 298-548 1-191 (192)
19 3uow_A GMP synthetase; structu 99.9 1.5E-22 5.1E-27 224.3 16.8 206 298-546 8-229 (556)
20 1o1y_A Conserved hypothetical 99.9 4.7E-22 1.6E-26 198.1 17.5 188 291-547 6-201 (239)
21 3tqi_A GMP synthase [glutamine 99.9 8.7E-23 3E-27 225.0 12.7 187 298-546 11-204 (527)
22 3d54_D Phosphoribosylformylgly 99.9 5.8E-22 2E-26 192.0 16.8 187 298-547 3-212 (213)
23 1gpw_B Amidotransferase HISH; 99.9 2.1E-22 7.2E-27 194.3 9.6 185 298-549 1-200 (201)
24 1gpm_A GMP synthetase, XMP ami 99.9 2.4E-22 8.4E-27 221.3 11.2 187 298-546 8-201 (525)
25 2ywb_A GMP synthase [glutamine 99.9 3.8E-22 1.3E-26 218.7 10.6 181 300-547 2-185 (503)
26 3l7n_A Putative uncharacterize 99.8 4.2E-20 1.4E-24 183.3 18.4 183 298-548 1-196 (236)
27 2ywd_A Glutamine amidotransfer 99.8 9.8E-21 3.4E-25 180.6 13.0 181 298-547 3-190 (191)
28 3m3p_A Glutamine amido transfe 99.8 2.4E-20 8.3E-25 187.3 16.4 173 298-530 4-181 (250)
29 1q7r_A Predicted amidotransfer 99.8 4.5E-21 1.6E-25 188.1 9.9 186 296-549 22-212 (219)
30 2nv0_A Glutamine amidotransfer 99.8 2.3E-20 7.9E-25 179.3 11.0 186 298-551 2-192 (196)
31 1ka9_H Imidazole glycerol phos 99.8 1.9E-20 6.5E-25 180.8 10.0 184 298-546 3-200 (200)
32 2vxo_A GMP synthase [glutamine 99.8 2E-20 6.9E-25 211.8 11.2 179 298-543 30-211 (697)
33 2iss_D Glutamine amidotransfer 99.8 3.8E-20 1.3E-24 180.0 9.1 186 294-546 17-207 (208)
34 2abw_A PDX2 protein, glutamina 99.7 3.6E-18 1.2E-22 167.9 11.2 197 297-549 3-216 (227)
35 1jvn_A Glutamine, bifunctional 99.7 2.2E-17 7.5E-22 183.0 5.3 197 298-546 5-215 (555)
36 2vdj_A Homoserine O-succinyltr 99.5 2.7E-13 9.3E-18 139.4 16.8 197 296-531 34-241 (301)
37 2h2w_A Homoserine O-succinyltr 99.5 3.6E-13 1.2E-17 139.0 16.2 197 296-531 46-252 (312)
38 3ugj_A Phosphoribosylformylgly 99.1 7E-10 2.4E-14 132.6 13.7 195 296-532 1046-1275(1303)
39 3l4e_A Uncharacterized peptida 98.5 1.4E-07 4.9E-12 91.7 5.8 92 297-405 27-127 (206)
40 1fy2_A Aspartyl dipeptidase; s 98.4 1.1E-07 3.7E-12 93.8 3.9 88 297-405 31-127 (229)
41 1oi4_A Hypothetical protein YH 97.8 5.9E-05 2E-09 71.8 8.6 103 296-407 22-134 (193)
42 3l18_A Intracellular protease 97.4 0.00037 1.3E-08 64.3 8.6 100 297-406 2-110 (168)
43 3qxc_A Dethiobiotin synthetase 96.8 0.0035 1.2E-07 62.2 9.3 170 1-218 21-198 (242)
44 2rk3_A Protein DJ-1; parkinson 96.7 0.0028 9.6E-08 60.0 7.4 99 298-406 4-114 (197)
45 2vrn_A Protease I, DR1199; cys 96.7 0.004 1.4E-07 58.4 8.4 100 297-406 9-123 (190)
46 4dzz_A Plasmid partitioning pr 96.7 0.0046 1.6E-07 57.7 8.5 97 1-165 1-97 (206)
47 4e08_A DJ-1 beta; flavodoxin-l 96.5 0.0053 1.8E-07 57.8 8.0 99 298-406 6-115 (190)
48 2ab0_A YAJL; DJ-1/THIJ superfa 96.4 0.0041 1.4E-07 59.5 6.2 99 298-405 3-114 (205)
49 3of5_A Dethiobiotin synthetase 96.4 0.0071 2.4E-07 59.1 7.9 167 1-217 4-177 (228)
50 4hcj_A THIJ/PFPI domain protei 96.3 0.003 1E-07 59.6 4.7 46 361-406 68-116 (177)
51 3er6_A Putative transcriptiona 96.2 0.0086 2.9E-07 57.6 7.6 106 296-407 7-124 (209)
52 2fex_A Conserved hypothetical 96.2 0.0093 3.2E-07 56.0 7.2 45 362-406 63-109 (188)
53 3efe_A THIJ/PFPI family protei 96.0 0.018 6.3E-07 55.3 8.8 46 361-406 73-120 (212)
54 3gra_A Transcriptional regulat 95.8 0.032 1.1E-06 53.3 9.2 48 360-407 69-117 (202)
55 3fgn_A Dethiobiotin synthetase 95.7 0.02 6.8E-07 57.0 7.7 167 1-218 26-195 (251)
56 3uk7_A Class I glutamine amido 95.7 0.019 6.3E-07 60.3 7.8 46 361-406 281-329 (396)
57 3ej6_A Catalase-3; heme, hydro 95.6 0.037 1.3E-06 62.4 10.0 96 297-405 537-644 (688)
58 3l3b_A ES1 family protein; ssg 95.5 0.0094 3.2E-07 59.1 4.3 47 361-407 106-167 (242)
59 1hyq_A MIND, cell division inh 95.4 0.086 2.9E-06 51.2 11.1 41 1-42 2-42 (263)
60 3cne_A Putative protease I; st 95.4 0.011 3.9E-07 54.6 4.2 46 361-406 65-119 (175)
61 1xjc_A MOBB protein homolog; s 95.3 0.019 6.5E-07 53.9 5.5 44 1-46 4-48 (169)
62 3uk7_A Class I glutamine amido 95.2 0.037 1.3E-06 58.1 8.2 47 361-407 88-137 (396)
63 3ttv_A Catalase HPII; heme ori 95.2 0.02 6.9E-07 64.9 6.4 100 297-405 600-706 (753)
64 3ot1_A 4-methyl-5(B-hydroxyeth 95.2 0.021 7.2E-07 54.7 5.7 98 298-405 10-119 (208)
65 3mgk_A Intracellular protease/ 95.1 0.012 4.1E-07 56.7 3.7 100 297-406 4-112 (211)
66 2ph1_A Nucleotide-binding prot 95.1 0.15 5E-06 50.0 11.5 42 1-43 18-59 (262)
67 3f5d_A Protein YDEA; unknow pr 95.0 0.03 1E-06 53.8 6.3 46 361-406 62-108 (206)
68 1vhq_A Enhancing lycopene bios 95.0 0.0099 3.4E-07 58.0 2.8 47 361-407 89-149 (232)
69 3fse_A Two-domain protein cont 95.0 0.046 1.6E-06 57.4 8.0 102 297-406 10-120 (365)
70 2xxa_A Signal recognition part 94.8 0.23 7.9E-06 53.1 12.9 40 2-43 101-141 (433)
71 3en0_A Cyanophycinase; serine 94.8 0.039 1.3E-06 56.2 6.6 108 282-405 43-159 (291)
72 2xj4_A MIPZ; replication, cell 94.7 0.2 6.8E-06 49.8 11.4 40 2-42 5-44 (286)
73 2g0t_A Conserved hypothetical 94.6 0.025 8.6E-07 59.1 4.6 41 1-42 169-209 (350)
74 1u9c_A APC35852; structural ge 94.4 0.023 8E-07 54.6 3.7 45 361-405 88-136 (224)
75 3dm5_A SRP54, signal recogniti 94.3 0.35 1.2E-05 52.0 12.8 40 2-43 101-140 (443)
76 3ea0_A ATPase, para family; al 94.1 0.094 3.2E-06 50.1 7.4 41 1-42 4-45 (245)
77 3kl4_A SRP54, signal recogniti 93.9 0.61 2.1E-05 49.9 13.7 39 2-42 98-136 (433)
78 3noq_A THIJ/PFPI family protei 93.9 0.042 1.4E-06 53.7 4.3 101 298-406 6-112 (231)
79 3kjh_A CO dehydrogenase/acetyl 93.8 0.16 5.6E-06 48.2 8.3 39 1-42 1-39 (254)
80 1rw7_A YDR533CP; alpha-beta sa 93.5 0.025 8.5E-07 55.5 2.0 45 361-405 97-145 (243)
81 3n7t_A Macrophage binding prot 93.4 0.033 1.1E-06 55.3 2.7 45 361-405 104-152 (247)
82 2iuf_A Catalase; oxidoreductas 93.3 0.11 3.9E-06 58.5 7.1 96 297-405 529-646 (688)
83 3kkl_A Probable chaperone prot 93.2 0.036 1.2E-06 54.8 2.6 45 361-405 97-145 (244)
84 1sy7_A Catalase 1; heme oxidat 92.4 0.22 7.6E-06 56.6 7.9 102 298-409 535-646 (715)
85 3end_A Light-independent proto 92.2 0.19 6.7E-06 50.1 6.4 43 1-45 41-83 (307)
86 4gdh_A DJ-1, uncharacterized p 92.1 0.16 5.5E-06 48.0 5.4 102 298-404 5-120 (194)
87 1n57_A Chaperone HSP31, protei 92.1 0.052 1.8E-06 55.0 2.1 46 360-405 143-192 (291)
88 3ewn_A THIJ/PFPI family protei 91.5 0.092 3.2E-06 52.1 3.1 102 297-406 23-132 (253)
89 2ffh_A Protein (FFH); SRP54, s 91.1 1.8 6E-05 46.2 12.8 40 2-43 99-138 (425)
90 3fkq_A NTRC-like two-domain pr 90.5 1.7 5.9E-05 44.9 11.8 44 1-45 143-186 (373)
91 3q9l_A Septum site-determining 90.4 0.35 1.2E-05 46.4 6.0 40 1-41 2-41 (260)
92 1g3q_A MIND ATPase, cell divis 90.2 0.38 1.3E-05 45.6 6.0 41 1-42 2-42 (237)
93 1ihu_A Arsenical pump-driving 89.8 0.26 8.9E-06 54.3 5.0 42 3-45 328-369 (589)
94 1np6_A Molybdopterin-guanine d 89.3 0.46 1.6E-05 44.3 5.6 44 1-46 6-50 (174)
95 3k9g_A PF-32 protein; ssgcid, 88.3 0.54 1.8E-05 45.7 5.6 42 1-44 27-68 (267)
96 3fwy_A Light-independent proto 87.5 0.75 2.6E-05 46.9 6.3 44 1-46 48-91 (314)
97 2afh_E Nitrogenase iron protei 86.7 0.82 2.8E-05 45.1 5.9 42 1-44 2-43 (289)
98 1cp2_A CP2, nitrogenase iron p 86.5 0.81 2.8E-05 44.3 5.7 42 1-44 1-42 (269)
99 3zq6_A Putative arsenical pump 86.0 0.6 2.1E-05 47.4 4.7 41 1-42 13-53 (324)
100 1wcv_1 SOJ, segregation protei 84.6 0.9 3.1E-05 44.1 5.0 43 1-44 6-48 (257)
101 1z0s_A Probable inorganic poly 84.2 0.63 2.1E-05 47.0 3.7 72 297-400 29-100 (278)
102 1byi_A Dethiobiotin synthase; 84.0 1.2 4.1E-05 41.8 5.4 40 1-43 1-40 (224)
103 3ug7_A Arsenical pump-driving 83.2 1.1 3.9E-05 46.0 5.2 41 1-42 25-65 (349)
104 3bhn_A THIJ/PFPI domain protei 82.4 0.31 1.1E-05 47.8 0.6 101 297-406 20-127 (236)
105 3pg5_A Uncharacterized protein 82.4 1.3 4.3E-05 45.8 5.2 45 1-46 1-45 (361)
106 1nks_A Adenylate kinase; therm 81.5 1.1 3.7E-05 40.6 3.9 36 1-38 1-36 (194)
107 1ls1_A Signal recognition part 81.0 9.6 0.00033 38.1 11.1 40 2-43 99-138 (295)
108 2oze_A ORF delta'; para, walke 79.4 1.7 5.8E-05 42.8 4.8 42 3-44 36-78 (298)
109 3iqw_A Tail-anchored protein t 78.5 1.9 6.6E-05 44.2 5.0 40 2-43 17-56 (334)
110 3cio_A ETK, tyrosine-protein k 78.3 2.2 7.6E-05 42.8 5.3 41 1-42 104-144 (299)
111 3io3_A DEHA2D07832P; chaperone 78.2 2 6.8E-05 44.4 5.0 40 1-42 18-59 (348)
112 2obn_A Hypothetical protein; s 77.6 19 0.00066 37.2 12.3 150 1-220 152-310 (349)
113 2woo_A ATPase GET3; tail-ancho 77.5 1.8 6.3E-05 44.0 4.5 41 2-43 19-59 (329)
114 1ihu_A Arsenical pump-driving 77.5 2.2 7.5E-05 46.8 5.4 39 2-42 9-47 (589)
115 3bfv_A CAPA1, CAPB2, membrane 77.4 2.8 9.6E-05 41.4 5.7 41 1-42 82-122 (271)
116 2woj_A ATPase GET3; tail-ancho 77.2 1.6 5.4E-05 45.1 3.9 42 2-44 18-61 (354)
117 4b4o_A Epimerase family protei 76.7 2.4 8.2E-05 41.5 5.0 34 1-41 1-34 (298)
118 3pfn_A NAD kinase; structural 76.6 2.3 8E-05 44.4 5.0 95 298-401 39-142 (365)
119 3cwq_A Para family chromosome 75.6 2.8 9.5E-05 39.5 4.9 40 2-43 1-40 (209)
120 2z0h_A DTMP kinase, thymidylat 74.3 3.7 0.00013 37.3 5.2 33 2-36 1-33 (197)
121 3guy_A Short-chain dehydrogena 72.4 1.9 6.4E-05 40.8 2.8 34 1-40 1-34 (230)
122 1gtv_A TMK, thymidylate kinase 71.0 1.7 5.9E-05 40.2 2.1 36 2-39 1-36 (214)
123 2f1r_A Molybdopterin-guanine d 70.1 3.2 0.00011 38.4 3.7 40 1-42 2-41 (171)
124 1zu4_A FTSY; GTPase, signal re 69.4 6.1 0.00021 40.2 6.0 39 2-42 106-144 (320)
125 2v3c_C SRP54, signal recogniti 68.3 2.8 9.6E-05 44.6 3.4 40 2-43 100-139 (432)
126 3la6_A Tyrosine-protein kinase 67.6 5.4 0.00018 39.8 5.1 40 2-42 93-132 (286)
127 1u0t_A Inorganic polyphosphate 67.5 5 0.00017 40.5 4.9 94 298-400 5-108 (307)
128 1fjh_A 3alpha-hydroxysteroid d 65.2 4.5 0.00016 38.5 3.9 34 1-40 1-34 (257)
129 1vma_A Cell division protein F 65.2 8.2 0.00028 39.0 5.9 40 2-43 105-144 (306)
130 2pbr_A DTMP kinase, thymidylat 64.4 6 0.00021 35.6 4.4 33 2-36 1-33 (195)
131 2oyn_A Hypothetical protein MJ 64.3 2.5 8.5E-05 38.6 1.7 31 2-32 5-39 (146)
132 1zmt_A Haloalcohol dehalogenas 64.3 4.7 0.00016 38.8 3.8 31 1-37 1-31 (254)
133 1eiw_A Hypothetical protein MT 64.2 4.7 0.00016 35.0 3.3 39 359-397 35-73 (111)
134 2px0_A Flagellar biosynthesis 63.2 7.2 0.00024 39.1 5.0 39 2-42 106-145 (296)
135 3gbv_A Putative LACI-family tr 62.8 29 0.001 33.0 9.3 90 296-397 7-100 (304)
136 3ez2_A Plasmid partition prote 60.5 10 0.00036 39.1 5.9 43 1-44 108-156 (398)
137 1j8m_F SRP54, signal recogniti 59.6 11 0.00036 38.0 5.5 40 2-43 99-138 (297)
138 3ksm_A ABC-type sugar transpor 59.1 24 0.00083 33.1 7.8 33 361-397 57-90 (276)
139 1rz3_A Hypothetical protein rb 58.4 12 0.00041 34.6 5.3 40 2-43 23-62 (201)
140 1p3d_A UDP-N-acetylmuramate--a 58.2 11 0.00037 40.2 5.6 57 2-64 119-175 (475)
141 4fyk_A Deoxyribonucleoside 5'- 58.2 22 0.00076 32.5 6.9 94 298-399 3-102 (152)
142 2an1_A Putative kinase; struct 57.7 7.8 0.00027 38.4 4.1 89 298-400 6-96 (292)
143 3p32_A Probable GTPase RV1496/ 57.5 33 0.0011 34.8 9.0 41 2-44 80-120 (355)
144 1nn5_A Similar to deoxythymidy 57.5 11 0.00037 34.6 4.8 34 2-37 10-43 (215)
145 2j37_W Signal recognition part 56.3 13 0.00046 40.3 6.0 40 2-43 102-141 (504)
146 3l49_A ABC sugar (ribose) tran 56.2 50 0.0017 31.3 9.6 33 361-397 60-92 (291)
147 3ez9_A Para; DNA binding, wing 56.2 9 0.00031 39.7 4.5 45 1-46 111-161 (403)
148 3a4m_A L-seryl-tRNA(SEC) kinas 55.9 10 0.00035 36.8 4.5 39 1-41 4-42 (260)
149 2f00_A UDP-N-acetylmuramate--L 55.7 12 0.00042 39.9 5.6 57 2-64 120-176 (491)
150 3l77_A Short-chain alcohol deh 55.3 7.9 0.00027 36.4 3.6 33 1-39 2-34 (235)
151 4edh_A DTMP kinase, thymidylat 54.7 14 0.00049 35.0 5.3 35 2-38 7-41 (213)
152 3h2s_A Putative NADH-flavin re 54.2 12 0.00042 34.4 4.6 34 1-41 1-34 (224)
153 3igf_A ALL4481 protein; two-do 53.7 11 0.00038 39.3 4.6 39 1-42 2-40 (374)
154 4e4y_A Short chain dehydrogena 53.4 7 0.00024 37.2 2.9 35 1-40 4-38 (244)
155 3l6e_A Oxidoreductase, short-c 53.4 8.7 0.0003 36.5 3.5 33 1-39 3-35 (235)
156 2ph3_A 3-oxoacyl-[acyl carrier 53.3 7.4 0.00025 36.5 3.0 31 1-37 1-31 (245)
157 3ew7_A LMO0794 protein; Q8Y8U8 53.2 15 0.0005 33.6 5.0 34 1-41 1-34 (221)
158 3kts_A Glycerol uptake operon 53.1 14 0.00048 35.1 4.8 78 112-216 11-88 (192)
159 2i2c_A Probable inorganic poly 52.7 7.9 0.00027 38.3 3.2 35 362-401 35-71 (272)
160 3uce_A Dehydrogenase; rossmann 52.6 7.1 0.00024 36.6 2.7 33 2-40 7-39 (223)
161 3llv_A Exopolyphosphatase-rela 52.4 10 0.00034 32.7 3.5 33 2-41 7-39 (141)
162 1zmo_A Halohydrin dehalogenase 52.3 10 0.00034 36.1 3.8 31 1-37 1-31 (244)
163 1kht_A Adenylate kinase; phosp 52.0 13 0.00045 33.2 4.4 34 2-37 4-37 (192)
164 3g1w_A Sugar ABC transporter; 51.8 46 0.0016 31.9 8.6 33 361-397 60-92 (305)
165 2x5o_A UDP-N-acetylmuramoylala 51.6 17 0.00059 38.2 5.8 55 2-70 105-164 (439)
166 1t0b_A THUA-like protein; treh 50.8 48 0.0016 32.4 8.5 88 297-400 7-106 (252)
167 1w78_A FOLC bifunctional prote 50.6 16 0.00053 38.2 5.2 32 2-37 50-81 (422)
168 2jah_A Clavulanic acid dehydro 50.2 10 0.00034 36.2 3.4 32 2-39 8-39 (247)
169 3orf_A Dihydropteridine reduct 50.1 12 0.0004 35.9 3.9 34 2-41 23-56 (251)
170 2wwf_A Thymidilate kinase, put 49.7 17 0.00059 33.2 4.8 34 2-37 11-44 (212)
171 3l6u_A ABC-type sugar transpor 49.6 50 0.0017 31.3 8.4 33 361-397 63-95 (293)
172 3ged_A Short-chain dehydrogena 49.3 10 0.00036 37.1 3.4 33 2-40 3-35 (247)
173 2yvu_A Probable adenylyl-sulfa 49.2 16 0.00056 32.9 4.5 39 2-42 14-52 (186)
174 3rht_A (gatase1)-like protein; 49.2 54 0.0018 32.3 8.6 81 298-397 5-85 (259)
175 3gv0_A Transcriptional regulat 49.2 44 0.0015 31.9 8.0 86 296-397 7-95 (288)
176 1jbw_A Folylpolyglutamate synt 49.1 15 0.00052 38.4 4.9 32 2-37 40-71 (428)
177 3rot_A ABC sugar transporter, 48.9 48 0.0016 31.8 8.2 33 361-397 60-92 (297)
178 3jy6_A Transcriptional regulat 48.9 72 0.0025 30.0 9.4 85 295-398 5-92 (276)
179 3e03_A Short chain dehydrogena 48.7 12 0.0004 36.4 3.7 31 2-38 7-37 (274)
180 3i1j_A Oxidoreductase, short c 48.5 10 0.00036 35.7 3.2 32 2-39 15-46 (247)
181 3h7a_A Short chain dehydrogena 47.6 13 0.00043 35.8 3.7 32 2-39 8-39 (252)
182 3ff4_A Uncharacterized protein 47.5 17 0.00059 31.7 4.2 37 362-404 82-118 (122)
183 3o26_A Salutaridine reductase; 47.5 11 0.00037 36.6 3.2 32 2-39 13-44 (311)
184 3vtz_A Glucose 1-dehydrogenase 47.0 12 0.00042 36.3 3.5 33 2-40 15-47 (269)
185 3nrs_A Dihydrofolate:folylpoly 46.9 15 0.00052 38.7 4.5 31 2-36 53-83 (437)
186 3zv4_A CIS-2,3-dihydrobiphenyl 46.9 12 0.0004 36.6 3.4 30 2-37 6-35 (281)
187 3t4x_A Oxidoreductase, short c 46.7 11 0.00038 36.4 3.1 32 2-39 11-42 (267)
188 1j6u_A UDP-N-acetylmuramate-al 46.6 24 0.00083 37.5 6.0 38 2-44 115-152 (469)
189 3lf2_A Short chain oxidoreduct 46.6 12 0.00042 36.1 3.4 32 2-39 9-40 (265)
190 3asu_A Short-chain dehydrogena 46.5 15 0.00051 35.2 4.0 31 2-38 1-31 (248)
191 2gk3_A Putative cytoplasmic pr 46.5 11 0.00039 36.8 3.2 67 313-397 42-124 (256)
192 4b79_A PA4098, probable short- 46.3 14 0.00047 36.2 3.7 33 2-40 12-44 (242)
193 3p19_A BFPVVD8, putative blue 46.2 12 0.0004 36.4 3.3 31 2-38 17-47 (266)
194 3rwb_A TPLDH, pyridoxal 4-dehy 46.2 11 0.00039 35.9 3.1 30 2-37 7-36 (247)
195 3tpc_A Short chain alcohol deh 45.9 14 0.00048 35.3 3.7 32 2-39 8-39 (257)
196 3gvc_A Oxidoreductase, probabl 45.9 14 0.00047 36.2 3.7 31 2-38 30-60 (277)
197 3kb2_A SPBC2 prophage-derived 45.9 15 0.0005 32.2 3.6 25 1-27 1-25 (173)
198 2ekp_A 2-deoxy-D-gluconate 3-d 45.7 14 0.00049 34.8 3.7 33 2-40 3-35 (239)
199 4imr_A 3-oxoacyl-(acyl-carrier 45.6 13 0.00044 36.3 3.4 30 2-37 34-63 (275)
200 3d02_A Putative LACI-type tran 45.6 88 0.003 29.7 9.5 34 361-398 60-93 (303)
201 3cs3_A Sugar-binding transcrip 45.6 52 0.0018 31.1 7.8 30 362-397 57-86 (277)
202 3nyw_A Putative oxidoreductase 45.5 11 0.00038 36.1 2.9 32 2-39 8-39 (250)
203 3m9w_A D-xylose-binding peripl 45.4 45 0.0015 32.2 7.4 33 361-397 57-89 (313)
204 1o5z_A Folylpolyglutamate synt 45.2 18 0.00062 38.1 4.8 32 2-37 53-84 (442)
205 2dtx_A Glucose 1-dehydrogenase 45.2 15 0.0005 35.6 3.7 34 2-41 9-42 (264)
206 2d1y_A Hypothetical protein TT 45.1 15 0.0005 35.2 3.7 33 2-40 7-39 (256)
207 2hq1_A Glucose/ribitol dehydro 45.1 13 0.00043 35.0 3.2 30 2-37 6-35 (247)
208 2pjk_A 178AA long hypothetical 45.0 27 0.00092 32.4 5.4 47 111-166 59-106 (178)
209 3pxx_A Carveol dehydrogenase; 44.9 13 0.00045 35.9 3.3 33 2-40 11-43 (287)
210 4e5v_A Putative THUA-like prot 44.9 51 0.0017 32.8 7.7 89 296-401 3-96 (281)
211 4hf7_A Putative acylhydrolase; 44.8 28 0.00094 32.0 5.5 61 118-186 63-130 (209)
212 4dmm_A 3-oxoacyl-[acyl-carrier 44.7 12 0.00041 36.3 3.1 30 2-37 29-58 (269)
213 3lyl_A 3-oxoacyl-(acyl-carrier 44.7 13 0.00045 35.1 3.2 31 2-38 6-36 (247)
214 2fwm_X 2,3-dihydro-2,3-dihydro 44.6 15 0.00052 35.0 3.7 33 2-40 8-40 (250)
215 3ezl_A Acetoacetyl-COA reducta 44.4 13 0.00044 35.4 3.1 29 2-36 14-42 (256)
216 3uug_A Multiple sugar-binding 44.2 77 0.0026 30.6 8.9 33 361-397 58-90 (330)
217 1vl8_A Gluconate 5-dehydrogena 44.1 14 0.00048 35.8 3.4 32 2-39 22-53 (267)
218 2rgy_A Transcriptional regulat 44.0 82 0.0028 30.0 9.0 32 361-398 66-97 (290)
219 1ooe_A Dihydropteridine reduct 43.6 17 0.00056 34.2 3.8 34 2-41 4-37 (236)
220 4eso_A Putative oxidoreductase 43.6 14 0.00049 35.4 3.4 32 2-39 9-40 (255)
221 2x7x_A Sensor protein; transfe 43.5 1.3E+02 0.0045 29.1 10.6 85 296-397 5-93 (325)
222 3bbl_A Regulatory protein of L 43.5 66 0.0023 30.6 8.2 32 361-398 63-94 (287)
223 3tfo_A Putative 3-oxoacyl-(acy 43.4 14 0.00047 36.0 3.2 33 2-40 5-37 (264)
224 2dkn_A 3-alpha-hydroxysteroid 43.3 23 0.00079 33.0 4.7 34 1-40 1-34 (255)
225 2ew8_A (S)-1-phenylethanol deh 43.3 16 0.00056 34.7 3.7 32 2-39 8-39 (249)
226 8abp_A L-arabinose-binding pro 43.2 87 0.003 29.8 9.0 84 297-397 2-88 (306)
227 3ai3_A NADPH-sorbose reductase 43.2 15 0.00051 35.2 3.4 31 2-38 8-38 (263)
228 3tb6_A Arabinose metabolism tr 43.2 89 0.003 29.4 9.0 37 361-398 70-106 (298)
229 4a0g_A Adenosylmethionine-8-am 43.2 19 0.00065 41.4 4.8 36 2-38 35-75 (831)
230 3k4h_A Putative transcriptiona 43.2 72 0.0024 30.2 8.4 31 361-397 68-98 (292)
231 3oid_A Enoyl-[acyl-carrier-pro 43.1 14 0.00048 35.6 3.2 29 2-36 5-33 (258)
232 2cfc_A 2-(R)-hydroxypropyl-COM 42.9 16 0.00054 34.4 3.5 31 2-38 3-33 (250)
233 3a28_C L-2.3-butanediol dehydr 42.9 14 0.00048 35.3 3.2 31 2-38 3-33 (258)
234 3op4_A 3-oxoacyl-[acyl-carrier 42.9 14 0.00049 35.2 3.2 31 2-38 10-40 (248)
235 2uvd_A 3-oxoacyl-(acyl-carrier 42.8 14 0.00047 35.1 3.1 30 2-37 5-34 (246)
236 3rkr_A Short chain oxidoreduct 42.8 14 0.00049 35.4 3.2 31 2-38 30-60 (262)
237 3tl3_A Short-chain type dehydr 42.7 13 0.00044 35.5 2.9 30 2-37 10-39 (257)
238 4iiu_A 3-oxoacyl-[acyl-carrier 42.6 14 0.00047 35.6 3.1 29 2-36 27-55 (267)
239 3tsc_A Putative oxidoreductase 42.6 15 0.00051 35.6 3.4 32 2-39 12-43 (277)
240 3ioy_A Short-chain dehydrogena 42.6 18 0.0006 36.2 4.0 32 2-39 9-40 (319)
241 3m1a_A Putative dehydrogenase; 42.5 16 0.00054 35.3 3.5 31 2-38 6-36 (281)
242 1g5t_A COB(I)alamin adenosyltr 42.5 14 0.00047 35.2 2.9 29 13-41 36-66 (196)
243 4dry_A 3-oxoacyl-[acyl-carrier 42.5 14 0.00047 36.2 3.1 31 2-38 34-64 (281)
244 1wma_A Carbonyl reductase [NAD 42.4 17 0.00057 34.4 3.6 34 1-40 4-38 (276)
245 4e3z_A Putative oxidoreductase 42.3 14 0.00049 35.6 3.2 29 2-36 27-55 (272)
246 3f1l_A Uncharacterized oxidore 42.3 16 0.00053 35.0 3.4 31 2-38 13-43 (252)
247 3ppi_A 3-hydroxyacyl-COA dehyd 42.2 17 0.00059 35.1 3.7 32 2-39 31-62 (281)
248 2rhc_B Actinorhodin polyketide 42.1 15 0.00053 35.6 3.4 32 2-39 23-54 (277)
249 3qk7_A Transcriptional regulat 42.1 88 0.003 29.9 8.9 31 361-397 64-94 (294)
250 3tzq_B Short-chain type dehydr 42.0 17 0.00059 35.1 3.7 32 2-39 12-43 (271)
251 1mxh_A Pteridine reductase 2; 41.9 14 0.00049 35.5 3.1 30 2-37 12-41 (276)
252 1iy8_A Levodione reductase; ox 41.9 16 0.00054 35.2 3.4 31 2-38 14-44 (267)
253 3dqp_A Oxidoreductase YLBE; al 41.8 23 0.00079 32.6 4.4 34 1-41 1-34 (219)
254 3lv8_A DTMP kinase, thymidylat 41.8 25 0.00087 34.0 4.8 35 2-38 28-63 (236)
255 3s55_A Putative short-chain de 41.7 16 0.00053 35.5 3.3 33 2-40 11-43 (281)
256 3pk0_A Short-chain dehydrogena 41.7 15 0.0005 35.5 3.1 32 2-39 11-42 (262)
257 3bos_A Putative DNA replicatio 41.7 40 0.0014 30.8 6.1 59 3-63 54-112 (242)
258 2nwq_A Probable short-chain de 41.6 20 0.00069 34.9 4.1 33 2-40 22-54 (272)
259 3qiv_A Short-chain dehydrogena 41.5 16 0.00056 34.6 3.4 31 2-38 10-40 (253)
260 4dqx_A Probable oxidoreductase 41.5 16 0.00055 35.7 3.4 31 2-38 28-58 (277)
261 1uuy_A CNX1, molybdopterin bio 41.4 50 0.0017 29.9 6.6 47 111-166 49-96 (167)
262 3uve_A Carveol dehydrogenase ( 41.3 16 0.00055 35.5 3.4 33 2-40 12-44 (286)
263 1e7w_A Pteridine reductase; di 41.2 15 0.00051 36.1 3.1 31 2-38 10-40 (291)
264 3ek2_A Enoyl-(acyl-carrier-pro 41.1 20 0.00067 34.2 3.9 31 2-37 15-46 (271)
265 2wsb_A Galactitol dehydrogenas 41.0 17 0.00057 34.3 3.4 31 2-38 12-42 (254)
266 2ae2_A Protein (tropinone redu 41.0 17 0.00058 34.8 3.4 32 2-39 10-41 (260)
267 1h5q_A NADP-dependent mannitol 41.0 17 0.00058 34.4 3.4 30 2-37 15-44 (265)
268 3sx2_A Putative 3-ketoacyl-(ac 41.0 16 0.00056 35.2 3.4 32 2-39 14-45 (278)
269 3r1i_A Short-chain type dehydr 41.0 18 0.00062 35.2 3.7 30 2-37 33-62 (276)
270 3t7c_A Carveol dehydrogenase; 41.0 16 0.00056 35.9 3.4 34 2-41 29-62 (299)
271 3icc_A Putative 3-oxoacyl-(acy 40.9 15 0.00053 34.6 3.1 30 2-37 8-37 (255)
272 2o23_A HADH2 protein; HSD17B10 40.9 19 0.00064 34.2 3.7 32 2-39 13-44 (265)
273 2p67_A LAO/AO transport system 40.8 1.1E+02 0.0038 30.7 9.7 40 2-43 57-96 (341)
274 3tjr_A Short chain dehydrogena 40.8 16 0.00056 36.0 3.4 30 2-37 32-61 (301)
275 3rd5_A Mypaa.01249.C; ssgcid, 40.7 17 0.00058 35.5 3.4 33 2-40 17-49 (291)
276 3gem_A Short chain dehydrogena 40.6 14 0.00049 35.7 2.8 33 2-40 28-60 (260)
277 3v2g_A 3-oxoacyl-[acyl-carrier 40.6 17 0.00057 35.4 3.3 30 2-37 32-61 (271)
278 1spx_A Short-chain reductase f 40.6 15 0.00053 35.3 3.1 32 2-39 7-38 (278)
279 3un1_A Probable oxidoreductase 40.5 18 0.00062 34.9 3.6 33 2-40 29-61 (260)
280 1edo_A Beta-keto acyl carrier 40.5 16 0.00054 34.2 3.1 29 2-36 2-30 (244)
281 3ftp_A 3-oxoacyl-[acyl-carrier 40.5 16 0.00054 35.6 3.1 30 2-37 29-58 (270)
282 2qq5_A DHRS1, dehydrogenase/re 40.4 16 0.00056 34.9 3.2 31 2-38 6-36 (260)
283 1o5i_A 3-oxoacyl-(acyl carrier 40.3 18 0.0006 34.6 3.4 34 2-41 20-53 (249)
284 3hp4_A GDSL-esterase; psychrot 40.0 41 0.0014 29.6 5.7 74 91-174 21-103 (185)
285 3ak4_A NADH-dependent quinucli 39.8 18 0.00061 34.6 3.4 31 2-38 13-43 (263)
286 1geg_A Acetoin reductase; SDR 39.7 18 0.00061 34.5 3.4 31 2-38 3-33 (256)
287 3ijr_A Oxidoreductase, short c 39.6 20 0.00067 35.2 3.7 32 2-39 48-79 (291)
288 3o38_A Short chain dehydrogena 39.6 22 0.00074 34.0 3.9 33 2-39 23-55 (266)
289 3ksu_A 3-oxoacyl-acyl carrier 39.4 15 0.00052 35.4 2.8 30 2-37 12-41 (262)
290 3afo_A NADH kinase POS5; alpha 39.3 15 0.00051 38.6 2.9 35 361-400 113-148 (388)
291 2q2v_A Beta-D-hydroxybutyrate 39.3 18 0.00062 34.5 3.3 30 2-37 5-34 (255)
292 3v8b_A Putative dehydrogenase, 39.2 18 0.00063 35.3 3.4 31 2-38 29-59 (283)
293 1yde_A Retinal dehydrogenase/r 39.2 18 0.00063 35.0 3.4 32 2-39 10-41 (270)
294 4tmk_A Protein (thymidylate ki 39.1 30 0.001 32.8 4.8 33 2-36 4-37 (213)
295 2z1n_A Dehydrogenase; reductas 39.1 19 0.00064 34.5 3.4 31 2-38 8-38 (260)
296 3uf0_A Short-chain dehydrogena 39.1 18 0.00062 35.2 3.3 30 2-37 32-61 (273)
297 2fep_A Catabolite control prot 39.0 1.3E+02 0.0045 28.5 9.6 32 361-398 71-102 (289)
298 4e6p_A Probable sorbitol dehyd 38.8 19 0.00065 34.5 3.4 31 2-38 9-39 (259)
299 1x1t_A D(-)-3-hydroxybutyrate 38.8 18 0.00062 34.6 3.2 30 2-37 5-34 (260)
300 3sc4_A Short chain dehydrogena 38.8 19 0.00067 35.1 3.5 33 2-40 10-42 (285)
301 4gkb_A 3-oxoacyl-[acyl-carrier 38.7 21 0.00072 35.0 3.7 30 2-37 8-37 (258)
302 2x9g_A PTR1, pteridine reducta 38.7 17 0.00057 35.5 3.0 32 2-39 24-55 (288)
303 3lkv_A Uncharacterized conserv 38.7 60 0.0021 31.8 7.2 66 296-370 7-77 (302)
304 4hp8_A 2-deoxy-D-gluconate 3-d 38.6 19 0.00066 35.3 3.4 30 2-37 10-39 (247)
305 1uls_A Putative 3-oxoacyl-acyl 38.5 19 0.00066 34.1 3.4 32 2-39 6-37 (245)
306 3svt_A Short-chain type dehydr 38.5 19 0.00065 34.9 3.4 33 2-40 12-44 (281)
307 4fn4_A Short chain dehydrogena 38.4 19 0.00065 35.3 3.4 32 2-39 8-39 (254)
308 3sju_A Keto reductase; short-c 38.3 19 0.00067 35.0 3.4 31 2-38 25-55 (279)
309 3edm_A Short chain dehydrogena 38.2 19 0.00066 34.5 3.3 30 2-37 9-38 (259)
310 3v2h_A D-beta-hydroxybutyrate 38.2 19 0.00065 35.1 3.3 30 2-37 26-55 (281)
311 1xu9_A Corticosteroid 11-beta- 38.2 18 0.00063 35.0 3.2 32 2-39 29-60 (286)
312 3is3_A 17BETA-hydroxysteroid d 38.1 18 0.00062 34.9 3.2 29 2-36 19-47 (270)
313 2ptg_A Enoyl-acyl carrier redu 38.0 23 0.0008 35.0 4.0 33 2-39 10-43 (319)
314 3rih_A Short chain dehydrogena 38.0 19 0.00066 35.5 3.4 33 2-40 42-74 (293)
315 4h15_A Short chain alcohol deh 38.0 18 0.00062 35.4 3.1 31 2-38 12-42 (261)
316 1xx6_A Thymidine kinase; NESG, 37.9 32 0.0011 32.1 4.7 33 2-38 9-43 (191)
317 2vos_A Folylpolyglutamate synt 37.9 28 0.00096 37.3 4.9 31 2-36 65-95 (487)
318 3osu_A 3-oxoacyl-[acyl-carrier 37.8 18 0.00063 34.3 3.1 29 2-36 5-33 (246)
319 2plr_A DTMP kinase, probable t 37.6 35 0.0012 30.9 4.9 30 2-34 5-34 (213)
320 4g81_D Putative hexonate dehyd 37.6 15 0.00053 36.0 2.5 30 2-37 10-39 (255)
321 3o74_A Fructose transport syst 37.4 1E+02 0.0036 28.6 8.4 32 361-397 57-88 (272)
322 4fc7_A Peroxisomal 2,4-dienoyl 37.3 19 0.00065 34.9 3.2 30 2-37 28-57 (277)
323 1yo6_A Putative carbonyl reduc 37.3 21 0.00071 33.2 3.3 33 2-40 4-38 (250)
324 1gz6_A Estradiol 17 beta-dehyd 37.1 17 0.00059 36.4 2.9 30 2-37 10-39 (319)
325 3pzy_A MOG; ssgcid, seattle st 37.1 32 0.0011 31.4 4.4 45 111-166 46-91 (164)
326 1yb1_A 17-beta-hydroxysteroid 37.1 21 0.00071 34.5 3.4 32 2-39 32-63 (272)
327 2zat_A Dehydrogenase/reductase 37.0 20 0.00068 34.2 3.2 31 2-38 15-45 (260)
328 3uxy_A Short-chain dehydrogena 36.9 18 0.00062 35.0 2.9 30 2-37 29-58 (266)
329 2r8r_A Sensor protein; KDPD, P 36.9 28 0.00095 33.9 4.2 32 11-42 14-45 (228)
330 3kjx_A Transcriptional regulat 36.8 1.5E+02 0.005 29.0 9.8 84 296-397 67-153 (344)
331 3ko8_A NAD-dependent epimerase 36.8 33 0.0011 33.2 4.8 30 4-39 3-32 (312)
332 1hdc_A 3-alpha, 20 beta-hydrox 36.7 20 0.0007 34.2 3.2 31 2-38 6-36 (254)
333 2c07_A 3-oxoacyl-(acyl-carrier 36.7 18 0.00061 35.2 2.9 31 2-38 45-75 (285)
334 4f67_A UPF0176 protein LPG2838 36.6 21 0.00072 35.4 3.3 62 2-71 183-247 (265)
335 3ucx_A Short chain dehydrogena 36.6 26 0.00088 33.7 4.0 31 2-38 12-42 (264)
336 3gk3_A Acetoacetyl-COA reducta 36.6 19 0.00066 34.6 3.1 29 2-36 26-54 (269)
337 3dii_A Short-chain dehydrogena 36.5 22 0.00076 33.7 3.5 32 2-39 3-34 (247)
338 2h7i_A Enoyl-[acyl-carrier-pro 36.4 29 0.00099 33.3 4.3 32 2-38 8-40 (269)
339 3qlj_A Short chain dehydrogena 36.2 19 0.00066 35.8 3.1 31 2-38 28-58 (322)
340 1ae1_A Tropinone reductase-I; 36.2 22 0.00076 34.3 3.4 32 2-39 22-53 (273)
341 3dhn_A NAD-dependent epimerase 36.1 36 0.0012 31.3 4.7 35 1-41 4-38 (227)
342 3d8u_A PURR transcriptional re 36.0 84 0.0029 29.4 7.5 31 361-397 58-88 (275)
343 3r3s_A Oxidoreductase; structu 36.0 22 0.00074 35.0 3.4 30 2-37 50-79 (294)
344 2nm0_A Probable 3-oxacyl-(acyl 35.9 26 0.0009 33.6 3.9 33 2-40 22-54 (253)
345 1xhl_A Short-chain dehydrogena 35.8 20 0.0007 35.3 3.1 32 2-39 27-58 (297)
346 4ibo_A Gluconate dehydrogenase 35.8 17 0.00059 35.3 2.6 30 2-37 27-56 (271)
347 1zem_A Xylitol dehydrogenase; 35.7 23 0.00078 34.0 3.4 31 2-38 8-38 (262)
348 3cxt_A Dehydrogenase with diff 35.7 22 0.00076 34.9 3.4 31 2-38 35-65 (291)
349 2o2s_A Enoyl-acyl carrier redu 35.6 26 0.00088 34.7 3.8 33 2-39 10-43 (315)
350 1sby_A Alcohol dehydrogenase; 35.5 25 0.00084 33.3 3.6 31 2-38 6-37 (254)
351 1ja9_A 4HNR, 1,3,6,8-tetrahydr 35.5 21 0.00071 34.0 3.1 30 2-37 22-51 (274)
352 3u5t_A 3-oxoacyl-[acyl-carrier 35.4 20 0.00068 34.8 2.9 29 2-36 28-56 (267)
353 2b4q_A Rhamnolipids biosynthes 35.2 21 0.00073 34.7 3.1 30 2-37 30-59 (276)
354 1gee_A Glucose 1-dehydrogenase 35.1 22 0.00075 33.7 3.1 30 2-37 8-37 (261)
355 3oec_A Carveol dehydrogenase ( 35.0 22 0.00074 35.4 3.2 31 2-38 47-77 (317)
356 3v9p_A DTMP kinase, thymidylat 34.9 31 0.0011 33.2 4.2 35 2-38 26-64 (227)
357 1orr_A CDP-tyvelose-2-epimeras 34.8 31 0.0011 33.8 4.3 31 1-37 1-31 (347)
358 1hxh_A 3BETA/17BETA-hydroxyste 34.7 20 0.00069 34.1 2.8 30 2-37 7-36 (253)
359 1yxm_A Pecra, peroxisomal tran 34.6 24 0.00081 34.4 3.4 31 2-38 19-49 (303)
360 2a4k_A 3-oxoacyl-[acyl carrier 34.5 24 0.00083 34.0 3.4 31 2-38 7-37 (263)
361 1fmc_A 7 alpha-hydroxysteroid 34.5 21 0.00072 33.5 2.9 31 2-38 12-42 (255)
362 3h75_A Periplasmic sugar-bindi 34.5 43 0.0015 33.1 5.3 32 362-398 62-93 (350)
363 3imf_A Short chain dehydrogena 34.5 23 0.00078 33.9 3.2 31 2-38 7-37 (257)
364 3grp_A 3-oxoacyl-(acyl carrier 34.4 23 0.00079 34.3 3.2 31 2-38 28-58 (266)
365 3n74_A 3-ketoacyl-(acyl-carrie 34.3 25 0.00086 33.4 3.4 32 2-39 10-41 (261)
366 2qhx_A Pteridine reductase 1; 34.3 22 0.00074 35.7 3.1 31 2-38 47-77 (328)
367 3u9l_A 3-oxoacyl-[acyl-carrier 34.2 25 0.00086 35.3 3.5 30 2-37 6-35 (324)
368 4egf_A L-xylulose reductase; s 34.2 22 0.00077 34.2 3.1 32 2-39 21-52 (266)
369 1di6_A MOGA, molybdenum cofact 34.2 50 0.0017 31.1 5.4 67 315-393 27-97 (195)
370 3nrc_A Enoyl-[acyl-carrier-pro 34.2 32 0.0011 33.3 4.2 33 2-39 27-60 (280)
371 1g0o_A Trihydroxynaphthalene r 34.2 25 0.00085 34.1 3.4 30 2-37 30-59 (283)
372 2pd4_A Enoyl-[acyl-carrier-pro 34.1 32 0.0011 33.2 4.2 32 2-38 7-39 (275)
373 4fgs_A Probable dehydrogenase 34.0 25 0.00085 34.9 3.4 31 2-38 30-60 (273)
374 1sny_A Sniffer CG10964-PA; alp 33.9 25 0.00086 33.4 3.3 34 1-40 21-57 (267)
375 1xq1_A Putative tropinone redu 33.9 23 0.00079 33.7 3.1 33 2-40 15-47 (266)
376 1e6c_A Shikimate kinase; phosp 33.8 25 0.00085 30.9 3.1 25 1-27 2-26 (173)
377 3ctm_A Carbonyl reductase; alc 33.6 27 0.00094 33.5 3.6 31 2-38 35-65 (279)
378 3brq_A HTH-type transcriptiona 33.5 1.1E+02 0.0037 28.8 7.9 31 361-397 76-107 (296)
379 4da9_A Short-chain dehydrogena 33.4 25 0.00087 34.2 3.3 30 2-37 30-59 (280)
380 2pez_A Bifunctional 3'-phospho 33.3 54 0.0018 29.1 5.3 32 2-35 6-37 (179)
381 3egc_A Putative ribose operon 33.3 65 0.0022 30.6 6.2 31 361-397 63-93 (291)
382 2bgk_A Rhizome secoisolaricire 33.2 26 0.0009 33.4 3.4 31 2-38 17-47 (278)
383 3ld9_A DTMP kinase, thymidylat 33.1 44 0.0015 32.1 4.9 33 2-36 22-55 (223)
384 1e8c_A UDP-N-acetylmuramoylala 33.0 45 0.0015 35.6 5.4 33 2-38 109-141 (498)
385 2c20_A UDP-glucose 4-epimerase 33.0 35 0.0012 33.3 4.3 32 1-38 1-32 (330)
386 3e61_A Putative transcriptiona 32.9 85 0.0029 29.4 7.0 29 361-397 63-92 (277)
387 1uj2_A Uridine-cytidine kinase 32.8 39 0.0013 32.2 4.5 40 2-43 23-67 (252)
388 1xkq_A Short-chain reductase f 32.8 24 0.00084 34.1 3.1 31 2-38 7-37 (280)
389 2fvy_A D-galactose-binding per 32.7 1.9E+02 0.0067 27.2 9.6 34 361-398 58-91 (309)
390 2p91_A Enoyl-[acyl-carrier-pro 32.7 35 0.0012 33.0 4.2 32 2-38 22-54 (285)
391 1vjn_A Zn-dependent hydrolase 32.7 44 0.0015 31.6 4.8 71 139-219 138-208 (220)
392 2p5y_A UDP-glucose 4-epimerase 32.2 38 0.0013 32.8 4.4 30 1-37 1-30 (311)
393 1qsg_A Enoyl-[acyl-carrier-pro 32.2 37 0.0013 32.4 4.3 32 2-38 10-42 (265)
394 2fn9_A Ribose ABC transporter, 32.1 2.1E+02 0.0071 26.8 9.7 33 361-397 57-89 (290)
395 1jlj_A Gephyrin; globular alph 32.1 62 0.0021 30.2 5.7 66 89-166 34-103 (189)
396 3pgx_A Carveol dehydrogenase; 32.1 28 0.00097 33.6 3.4 32 2-39 16-47 (280)
397 3tox_A Short chain dehydrogena 32.1 23 0.00078 34.7 2.7 31 2-38 9-39 (280)
398 3kke_A LACI family transcripti 31.9 1.4E+02 0.0047 28.6 8.4 31 361-397 70-100 (303)
399 3qvo_A NMRA family protein; st 31.9 40 0.0014 31.5 4.4 35 1-41 23-58 (236)
400 3huu_A Transcription regulator 31.7 92 0.0032 29.8 7.1 31 361-397 82-112 (305)
401 1oaa_A Sepiapterin reductase; 31.6 29 0.00098 33.0 3.3 31 2-38 7-40 (259)
402 3clk_A Transcription regulator 31.6 89 0.003 29.6 6.9 32 361-398 64-95 (290)
403 1d7o_A Enoyl-[acyl-carrier pro 31.5 36 0.0012 33.2 4.1 35 2-41 9-44 (297)
404 2v54_A DTMP kinase, thymidylat 31.5 27 0.00092 31.6 3.0 31 2-36 5-35 (204)
405 3rft_A Uronate dehydrogenase; 30.9 28 0.00095 33.4 3.1 35 1-41 3-37 (267)
406 1jtv_A 17 beta-hydroxysteroid 30.9 25 0.00086 35.2 2.9 30 2-37 3-32 (327)
407 2h3h_A Sugar ABC transporter, 30.9 1.2E+02 0.0043 29.0 7.9 34 361-398 56-89 (313)
408 2wyu_A Enoyl-[acyl carrier pro 30.8 37 0.0012 32.4 4.0 31 2-37 9-40 (261)
409 4eaq_A DTMP kinase, thymidylat 30.8 38 0.0013 32.2 4.1 31 2-35 27-57 (229)
410 3kvo_A Hydroxysteroid dehydrog 30.5 30 0.001 35.1 3.5 32 2-39 46-77 (346)
411 1odf_A YGR205W, hypothetical 3 30.4 39 0.0013 33.6 4.1 41 2-44 32-75 (290)
412 1uf9_A TT1252 protein; P-loop, 30.2 39 0.0013 30.4 3.8 25 2-32 9-33 (203)
413 3oig_A Enoyl-[acyl-carrier-pro 30.1 39 0.0013 32.1 4.0 31 2-37 8-39 (266)
414 4eyg_A Twin-arginine transloca 30.1 2.4E+02 0.0083 27.3 10.1 92 295-399 4-104 (368)
415 1m7g_A Adenylylsulfate kinase; 30.0 39 0.0013 31.2 3.9 37 2-40 26-63 (211)
416 2a6a_A Hypothetical protein TM 29.9 48 0.0016 31.8 4.5 45 360-405 64-110 (218)
417 2gk4_A Conserved hypothetical 29.6 35 0.0012 33.3 3.5 39 2-40 4-52 (232)
418 4ag6_A VIRB4 ATPase, type IV s 29.5 53 0.0018 33.5 5.1 35 3-41 37-71 (392)
419 1a7j_A Phosphoribulokinase; tr 29.5 33 0.0011 34.0 3.5 41 2-44 6-46 (290)
420 3hcw_A Maltose operon transcri 29.5 1.2E+02 0.0039 29.0 7.4 31 361-397 67-97 (295)
421 2rh8_A Anthocyanidin reductase 29.4 51 0.0018 32.2 4.9 34 2-41 10-43 (338)
422 2r47_A Uncharacterized protein 29.3 12 0.0004 34.5 0.1 104 280-399 15-125 (157)
423 3o1i_D Periplasmic protein TOR 29.2 1.3E+02 0.0044 28.5 7.6 87 296-397 4-93 (304)
424 1jx6_A LUXP protein; protein-l 29.1 2E+02 0.0068 27.9 9.2 32 361-397 103-134 (342)
425 3d7l_A LIN1944 protein; APC893 29.1 53 0.0018 29.6 4.6 33 1-41 4-36 (202)
426 3r6d_A NAD-dependent epimerase 29.0 50 0.0017 30.2 4.5 34 1-40 5-39 (221)
427 3h5o_A Transcriptional regulat 29.0 1.6E+02 0.0056 28.6 8.5 31 361-397 117-147 (339)
428 2iks_A DNA-binding transcripti 28.8 1.4E+02 0.0049 28.2 7.9 32 361-397 75-106 (293)
429 2c29_D Dihydroflavonol 4-reduc 28.5 48 0.0016 32.5 4.4 34 2-41 6-39 (337)
430 2o20_A Catabolite control prot 28.5 1.9E+02 0.0066 28.0 9.0 31 361-397 118-148 (332)
431 3e48_A Putative nucleoside-dip 28.4 48 0.0016 31.7 4.3 34 1-41 1-35 (289)
432 2rjo_A Twin-arginine transloca 28.3 1.6E+02 0.0055 28.5 8.3 33 361-397 60-94 (332)
433 3gdg_A Probable NADP-dependent 28.3 37 0.0013 32.3 3.5 31 2-37 21-52 (267)
434 2vk2_A YTFQ, ABC transporter p 28.0 1.8E+02 0.0061 27.7 8.5 33 361-397 57-89 (306)
435 2grj_A Dephospho-COA kinase; T 27.9 43 0.0015 31.1 3.8 27 2-34 13-40 (192)
436 2wtz_A UDP-N-acetylmuramoyl-L- 27.9 57 0.002 35.2 5.3 32 2-37 147-178 (535)
437 3brs_A Periplasmic binding pro 27.8 94 0.0032 29.2 6.3 33 361-397 64-96 (289)
438 1y63_A LMAJ004144AAA protein; 27.7 37 0.0013 30.6 3.2 22 2-25 11-32 (184)
439 2pk3_A GDP-6-deoxy-D-LYXO-4-he 27.6 56 0.0019 31.6 4.7 35 1-41 12-46 (321)
440 1vi6_A 30S ribosomal protein S 27.5 2.8E+02 0.0094 26.5 9.4 78 297-398 68-145 (208)
441 2lpm_A Two-component response 27.5 1.3E+02 0.0045 25.8 6.6 71 296-395 7-83 (123)
442 2hsg_A Glucose-resistance amyl 27.4 1.2E+02 0.0039 29.6 7.0 31 361-397 115-145 (332)
443 3e3m_A Transcriptional regulat 27.4 1.8E+02 0.006 28.6 8.5 31 361-397 125-155 (355)
444 3i4f_A 3-oxoacyl-[acyl-carrier 27.2 50 0.0017 31.2 4.2 31 1-37 7-37 (264)
445 1yrb_A ATP(GTP)binding protein 27.2 75 0.0026 29.8 5.5 38 4-44 17-54 (262)
446 3pzy_A MOG; ssgcid, seattle st 27.1 32 0.0011 31.4 2.7 65 315-393 31-97 (164)
447 3c3k_A Alanine racemase; struc 27.0 1.5E+02 0.0053 27.9 7.7 31 361-398 63-93 (285)
448 2khz_A C-MYC-responsive protei 26.3 1.5E+02 0.0052 26.8 7.1 96 296-399 10-111 (165)
449 2ioy_A Periplasmic sugar-bindi 26.3 2.8E+02 0.0097 25.9 9.5 33 361-397 56-88 (283)
450 3r7f_A Aspartate carbamoyltran 26.1 3.2E+02 0.011 27.5 10.1 159 158-370 53-211 (304)
451 1u7z_A Coenzyme A biosynthesis 26.1 39 0.0013 32.7 3.2 32 2-38 9-55 (226)
452 3grk_A Enoyl-(acyl-carrier-pro 26.0 50 0.0017 32.3 4.1 31 2-37 32-63 (293)
453 3da7_A Barnase circular permut 26.0 50 0.0017 28.6 3.4 36 54-100 26-61 (111)
454 3kkj_A Amine oxidase, flavin-c 25.9 36 0.0012 30.3 2.7 28 15-42 9-36 (336)
455 2bd0_A Sepiapterin reductase; 25.8 41 0.0014 31.3 3.3 25 2-32 3-27 (244)
456 2qt1_A Nicotinamide riboside k 25.7 39 0.0013 30.8 3.0 37 2-44 22-58 (207)
457 2if2_A Dephospho-COA kinase; a 25.6 42 0.0014 30.5 3.2 23 1-25 1-23 (204)
458 1udb_A Epimerase, UDP-galactos 25.4 62 0.0021 31.6 4.6 28 4-37 3-30 (338)
459 4fs3_A Enoyl-[acyl-carrier-pro 25.3 59 0.002 31.1 4.4 31 2-37 7-38 (256)
460 4amg_A Snogd; transferase, pol 25.3 46 0.0016 33.2 3.7 37 1-40 23-59 (400)
461 3lkv_A Uncharacterized conserv 25.0 1.4E+02 0.0046 29.2 7.0 37 359-398 190-227 (302)
462 3sc6_A DTDP-4-dehydrorhamnose 25.0 35 0.0012 32.6 2.7 33 1-39 4-37 (287)
463 4id9_A Short-chain dehydrogena 25.0 55 0.0019 32.2 4.1 34 2-41 20-53 (347)
464 3awd_A GOX2181, putative polyo 24.8 63 0.0022 30.3 4.4 30 2-37 14-43 (260)
465 3u3x_A Oxidoreductase; structu 24.7 67 0.0023 32.5 4.8 66 297-371 26-97 (361)
466 3ic5_A Putative saccharopine d 24.3 80 0.0027 25.4 4.4 33 2-41 6-39 (118)
467 2f6r_A COA synthase, bifunctio 24.2 48 0.0016 32.5 3.5 34 1-42 75-108 (281)
468 3rfq_A Pterin-4-alpha-carbinol 24.0 1.3E+02 0.0043 28.1 6.2 65 296-374 29-101 (185)
469 3g85_A Transcriptional regulat 24.0 1.6E+02 0.0056 27.5 7.3 31 361-397 67-97 (289)
470 1rrv_A Glycosyltransferase GTF 24.0 67 0.0023 32.6 4.7 38 1-41 1-38 (416)
471 3e70_C DPA, signal recognition 24.0 1E+02 0.0035 31.2 6.0 39 2-42 130-168 (328)
472 1tjy_A Sugar transport protein 24.0 2.2E+02 0.0076 27.4 8.4 33 361-397 59-91 (316)
473 3k9c_A Transcriptional regulat 23.9 88 0.003 29.8 5.3 30 361-397 65-94 (289)
474 3dbi_A Sugar-binding transcrip 23.8 2.9E+02 0.0099 26.7 9.3 32 361-397 118-149 (338)
475 3e9n_A Putative short-chain de 23.8 37 0.0013 31.9 2.5 30 2-38 6-35 (245)
476 3m2p_A UDP-N-acetylglucosamine 23.5 69 0.0024 31.0 4.5 33 2-40 3-35 (311)
477 1dbq_A Purine repressor; trans 23.5 2.4E+02 0.0083 26.3 8.4 31 361-397 62-93 (289)
478 3f9i_A 3-oxoacyl-[acyl-carrier 23.4 64 0.0022 30.2 4.1 31 2-38 15-45 (249)
479 2q1w_A Putative nucleotide sug 23.4 78 0.0027 31.1 4.9 34 1-40 21-54 (333)
480 4hv4_A UDP-N-acetylmuramate--L 23.4 73 0.0025 34.0 5.0 57 2-64 123-179 (494)
481 3d3q_A TRNA delta(2)-isopenten 23.4 97 0.0033 31.8 5.7 44 2-52 8-54 (340)
482 3d3w_A L-xylulose reductase; u 23.4 71 0.0024 29.6 4.4 32 2-39 8-39 (244)
483 2ehd_A Oxidoreductase, oxidore 23.3 68 0.0023 29.6 4.2 32 2-39 6-37 (234)
484 1t2a_A GDP-mannose 4,6 dehydra 23.3 77 0.0026 31.6 4.9 33 2-40 25-57 (375)
485 1uz5_A MOEA protein, 402AA lon 23.2 77 0.0026 33.2 5.0 45 111-166 226-271 (402)
486 3eag_A UDP-N-acetylmuramate:L- 23.1 1.2E+02 0.0039 30.4 6.2 59 2-64 109-174 (326)
487 1ek6_A UDP-galactose 4-epimera 22.9 66 0.0023 31.5 4.2 30 2-37 3-32 (348)
488 2p4h_X Vestitone reductase; NA 22.9 71 0.0024 30.8 4.4 31 2-38 2-32 (322)
489 3oml_A GH14720P, peroxisomal m 22.7 39 0.0013 37.2 2.8 31 2-38 20-50 (613)
490 3bil_A Probable LACI-family tr 22.7 1.3E+02 0.0045 29.6 6.5 31 361-397 121-151 (348)
491 3rfq_A Pterin-4-alpha-carbinol 22.7 85 0.0029 29.3 4.7 62 89-166 49-114 (185)
492 4h08_A Putative hydrolase; GDS 22.6 75 0.0026 28.5 4.3 47 137-186 72-123 (200)
493 1uay_A Type II 3-hydroxyacyl-C 22.5 77 0.0026 29.2 4.4 34 2-41 3-36 (242)
494 3trf_A Shikimate kinase, SK; a 22.5 63 0.0021 28.7 3.7 24 2-27 6-29 (185)
495 1n7h_A GDP-D-mannose-4,6-dehyd 22.4 80 0.0027 31.5 4.8 33 2-40 29-61 (381)
496 2vfb_A Arylamine N-acetyltrans 22.3 97 0.0033 30.7 5.3 53 22-74 76-133 (280)
497 1kew_A RMLB;, DTDP-D-glucose 4 22.2 76 0.0026 31.2 4.6 33 1-40 1-34 (361)
498 1sb8_A WBPP; epimerase, 4-epim 22.2 82 0.0028 31.0 4.8 33 1-39 27-59 (352)
499 1xg5_A ARPG836; short chain de 22.2 75 0.0026 30.4 4.4 32 2-39 33-64 (279)
500 2ydy_A Methionine adenosyltran 22.2 72 0.0025 30.8 4.3 32 2-39 3-34 (315)
No 1
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=3.6e-198 Score=1592.58 Aligned_cols=529 Identities=48% Similarity=0.842 Sum_probs=509.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~ 80 (564)
||||||||||+|||||||+|||||+|||+|||+||+||||||||||||||||||||||||||||+||||||||||||||+
T Consensus 3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpylnvd~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 82 (535)
T 3nva_A 3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMDV 82 (535)
T ss_dssp CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSSSSSTTCCHHHHCCCEECTTCCEECTHHHHHHHHHCC
T ss_pred ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 008476 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (564)
Q Consensus 81 ~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdies~pf~ 160 (564)
+|||+||+||||||++||+|||||||||||||||||||||||+||+++|+ ..+|||||||||||||||||+|||
T Consensus 83 ~l~~~~n~ttg~iy~~vi~ker~g~ylg~tvqviphit~eik~~i~~~~~------~~~~dv~i~eiggtvgdies~pf~ 156 (535)
T 3nva_A 83 NMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKDMIRYASK------INNAEITLVEIGGTVGDIESLPFL 156 (535)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHH------HHTCSEEEEEECSCTTSGGGHHHH
T ss_pred CcccccCcchhHHHHHHHHHHhcCCcCCCeeEECCCchHHHHHHHHHhhc------cCCCCEEEEEeCCccchhcccHHH
Confidence 99999999999999999999999999999999999999999999999995 468999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEeeCCCCCcchhccccccCCCCCCC
Q 008476 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (564)
Q Consensus 161 ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~~~~l~~~~r~kisl~~~v~~~~ 240 (564)
|||||||+++|++|+|||||||||||+++||+||||||||||+|||+|||||+|||||++++++++|+||||||||++++
T Consensus 157 ea~rq~~~~~g~~n~~~ih~tlvp~~~~~ge~ktkptqhsv~~Lrs~GIqPdilvcRs~~~l~~~~r~KiaLfc~V~~~~ 236 (535)
T 3nva_A 157 EAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDH 236 (535)
T ss_dssp HHHHHHHHHHCTTTEEEEEEEECCBCTTTSSBCCHHHHHHHHHHHHHTCCCSEEEEEESSCCCHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCchHHHHHHHHhCCCCCCEEEEecCCCCCHHHHHhhhhhcCCChhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcccccHHHHHhhhHHHHHHHcCCCCCCCccchHHHHHHHhhhc--CCCCceEEEEEeccCCCcchHHHHHH
Q 008476 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICD--GLHEPVRIAMVGKYTGLSDAYLSILK 318 (564)
Q Consensus 241 Vi~~~dvdtiy~vp~~L~~qG~~~~i~~~l~l~~~~~~~~~~~w~~~~~~~~--~~~~~~~IavVGkY~~~~Day~SIi~ 318 (564)
||+++|+||||++|++||+||+++.++++|+|+ .+.+++++|++++++++ ++.++++||+||||+++.|||.|+.+
T Consensus 237 VI~i~DvdtiY~vpl~L~~qGl~~~~~~~l~l~--~~~~~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~DaY~Sv~e 314 (535)
T 3nva_A 237 IVSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKE 314 (535)
T ss_dssp EEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSGGGGHHHHH
T ss_pred eEecCCCChHHHhHHHHHHCCcHHHHHHHcCCC--CCCCCHHHHHHHHHHhhccCCCCeeEEEEEecCcCCchhHHHHHH
Confidence 999999999999999999999999999999997 46779999999999998 88889999999999999999999999
Q ss_pred HHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 319 ALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 319 aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
||+|+|.++.++|++.|++++++++++. ++|+.|+++|||++|||||+++.++++.++++|+++++|+||||
T Consensus 315 AL~hag~~~~~~V~I~wIds~~l~~~~~--------~~~~~L~~~DgIIlpGG~G~~~~~g~i~~ir~a~~~~~PiLGIC 386 (535)
T 3nva_A 315 AIYHASAYIGVRPKLIWIESTDLESDTK--------NLNEILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPFLGIC 386 (535)
T ss_dssp HHHHHHHHTTCEEEEEEEEGGGGCCSSS--------CCTTTTTSCSEEEECCCCSSTTHHHHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHcCCCeEEEEecchhcccccc--------chhhhccCCCEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEC
Confidence 9999999999999999999998875432 13467899999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCc-ccccCCceeecceeeEeecCCchhhhccCCceeEeeee
Q 008476 399 LGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERH 477 (564)
Q Consensus 399 LGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~-~~~~GgtmrlG~~~v~l~~~~s~~~~iyg~~~~I~erh 477 (564)
+|||+|++++|++++|++||+|+||++++++|+|.+|+++. ..++|+|||+|+|+|.+.++ |+++++|+ +..+.+||
T Consensus 387 lG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~g-S~L~~iyG-~~~I~erH 464 (535)
T 3nva_A 387 FGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEG-TIAYQLYG-KKVVYERH 464 (535)
T ss_dssp HHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEECTT-SHHHHHHT-SSEEEEEE
T ss_pred cchhHHHHHhhccccCccCCcccccCCCCCCCeeecchhcccccccCCccccCceEEEEcCC-CcHHHHhC-CCeeeecc
Confidence 99999999999999999999999999999999999999864 58899999999999999998 89999996 66789999
Q ss_pred ceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhc
Q 008476 478 RHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYF 548 (564)
Q Consensus 478 ~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~~p~pLF~~Fv~aa~~ 548 (564)
||||+||+.+.+.+++.|++++|+++|| ++|++|+++||||+|||||||+.++|.+++|||++|++||.+
T Consensus 465 rHryeVNs~h~q~l~~~GL~vsA~s~DG-~IEAIE~~~~pf~vGVQfHPE~~~~p~~~~~LF~~Fv~Aa~~ 534 (535)
T 3nva_A 465 RHRYEVNPKYVDILEDAGLVVSGISENG-LVEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAVAS 534 (535)
T ss_dssp EECCEECHHHHHHHHHTTCEEEEECTTC-CEEEEECTTSSCEEEESSCGGGGCCSSSCCHHHHHHHHHHTC
T ss_pred cccceechHHHhhcccCCeEEEEEeCCC-CEEEEEeCCCCcEEEEEeCCEecCCCCChhHHHHHHHHHHHh
Confidence 9999999999999988999999999999 599999999999999999999999999999999999999864
No 2
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=100.00 E-value=1.2e-163 Score=1341.74 Aligned_cols=530 Identities=50% Similarity=0.853 Sum_probs=496.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~ 80 (564)
||||||||||+||+||||++||||+||++|||+|+++|+|||||||||||||+||||||||+||+|+||||||||||+++
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~g~~~~~~~~ 91 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVTADGAETDLDIGHYERFLDM 91 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECSSCSSGGGSCSSTTSCCEECTTCCEECTHHHHHHHHHTS
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccccccCccccCcccCCceEECCCCceehhhhccHHhcCCc
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 008476 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (564)
Q Consensus 81 ~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdies~pf~ 160 (564)
.|+++||+||||||++||+|||+|||+|+|||||||||||||+||+++++ +.++||||||+||||||||||||+
T Consensus 92 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~------~~~~d~~i~e~~gt~~di~~~~~~ 165 (550)
T 1vco_A 92 DLSRGNNLTTGQVYLSVIQKERRGEYLSQTVQVIPHITDEIKERIRKVAE------EQKAEIVVVEVGGTVGDIESLPFL 165 (550)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCTTTHHHHHHHHHHHHHHH------HTTCSEEEEEECSCTTSSTTHHHH
T ss_pred ccCCCCCeeccEEchhhhhhhcccccccCceEEhhHHHHHHHHHHHHHhc------ccCCCEEEEECCCChhHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999985 457999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEeeCCCCCcchhccccccCCCCCCC
Q 008476 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (564)
Q Consensus 161 ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~~~~l~~~~r~kisl~~~v~~~~ 240 (564)
||+||||+++|++|+|||||||||||+++||+||||||||||+|||.|||||++|||++++++++||+|+||||||++++
T Consensus 166 ~~~rq~~~~~~~~~~~~~h~~~~p~~~~~~e~ktkptq~sv~~lrs~gi~pd~lvvR~~~~~~~~~r~k~sL~~~v~~~~ 245 (550)
T 1vco_A 166 EAIRQFRFDEGEGNTLYLHLTLVPYLETSEEFKTKPTQHSVATLRGVGIQPDILVLRSARPVPEEVRRKVALFTNVRPGH 245 (550)
T ss_dssp HHHHTHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHHTTCCCSEEEEEESSCCCHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHhHhhCcCCEEEEEEeCeecccCCCCcCCCCcchhHHHHhcCCCccCEEEEeCCCCCCcchhcccchhcCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcccccHHHHHhhhHHHHHHHcCCCCCCCccchHHHHHHHhhhcCCCCceEEEEEeccCCCcchHHHHHHHH
Q 008476 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 320 (564)
Q Consensus 241 Vi~~~dvdtiy~vp~~L~~qG~~~~i~~~l~l~~~~~~~~~~~w~~~~~~~~~~~~~~~IavVGkY~~~~Day~SIi~aL 320 (564)
||++.|+||||+||++||+||++++++++++++ ...+++..|.+++.+++++..+++|+++|||..+.|+|.|+.++|
T Consensus 246 Vi~~~dvdt~y~lp~~lr~~G~~~~v~~~~~l~--~~~~~l~~w~~~~~~~~~~~~~v~I~ivgkyv~l~D~y~Sv~~aL 323 (550)
T 1vco_A 246 VFSSPTVEHLYEVPLLLEEQGLGRAVERALGLE--AVIPNLSFWQEAVRVLKHPERTVKIAIAGKYVKMPDAYLSLLEAL 323 (550)
T ss_dssp EEEEECCSCTTHHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHSCSEEEEEEEEESCC---CTTHHHHHHH
T ss_pred eeecCCCChHHHHHHHHHHcCChhhhHhhCCCC--chhHHHHHhHHHHHhhcCCCCceEEcccCCeEEEEecHHHHHHHH
Confidence 999999999999999999999999999999987 356788999999999999888899999999999999999999999
Q ss_pred HHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 008476 321 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (564)
Q Consensus 321 ~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGICLG 400 (564)
.|++.+..+++.+.|++++++++++ +++.+.++||||||||||+++.++++.++++|+++++|+||||||
T Consensus 324 ~~~g~~~g~~v~I~~~d~~~~~~~~----------~~~~L~~~DGIILpGGfGd~~~~g~i~~ir~a~e~~iPiLGICLG 393 (550)
T 1vco_A 324 RHAGIKNRARVEVKWVDAESLEAAD----------LEEAFRDVSGILVPGGFGVRGIEGKVRAAQYARERKIPYLGICLG 393 (550)
T ss_dssp HHHHHHTTEEEEEEEEEGGGC--CC----------HHHHTTTCSCEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHHHHHcCCeEEEEEeCccccccch----------HHHHHhcCCEEEECCCCCCcchhhhHHHHHHHHHCCCcEEEECcC
Confidence 9999988889999999987664321 345688999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccCCcccccCCCCCCCeeeecCCC-cccccCCceeecceeeEeecCCchhhhccCCceeEeeeece
Q 008476 401 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEG-SKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRH 479 (564)
Q Consensus 401 mQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~-~~~~~GgtmrlG~~~v~l~~~~s~~~~iyg~~~~I~erh~H 479 (564)
||+|++++|++++++++++++||++.+.+|++..|+++ ..+|+|++||+|.++|.+.++ +++..+|+ +..+.++|+|
T Consensus 394 mQlL~~a~Gg~v~~l~~~~s~E~~~~~~hpvi~~~~~q~~i~~~ggtmrlG~~~v~i~~~-s~l~~iy~-~~~v~e~h~H 471 (550)
T 1vco_A 394 LQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIKPG-TLLHRLYG-KEEVLERHRH 471 (550)
T ss_dssp HHHHHHHHHHHTSCCTTCEETTTCTTCSCEEEEESCGGGCC---CCCCEEEEEEEEECTT-SHHHHHHC-CSEEEEEEEE
T ss_pred HHHHHHHhCcccccCCccccccccCCCCCCeEEeccccccccccCCcccccceEEEEccC-chhhHhcC-Cceeeeeccc
Confidence 99999999999999999999999998999999999863 578999999999999999886 89999996 5677799999
Q ss_pred eeeeChhhhhhhccCCeEEEEEeCCC-----CeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhccC
Q 008476 480 RYEVNPDMIARLENAGLSFTGKDETS-----QRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYFVC 550 (564)
Q Consensus 480 rYeVn~~~v~~l~~~gl~~~a~s~dg-----~~vE~ie~~~~pffiGvQFHPE~ss~p~~p~pLF~~Fv~aa~~~~ 550 (564)
+|+||+.+.+.++..++.++|+++|| ..+|++|+++||||+|||||||++++|.++++||++|+++|.++.
T Consensus 472 ~Y~Vns~~~~~l~~~gl~v~a~s~dG~g~~~~~VeaIe~~~~p~fvGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~~ 547 (550)
T 1vco_A 472 RYEVNPLYVDGLERAGLVVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFVEAALAYQ 547 (550)
T ss_dssp SEEECHHHHHHHHHHTEEEEEECCCBTTBSTTCEEEEEETTSSSEEEESSCGGGGCBTTBCCHHHHHHHHHHHHHT
T ss_pred eEEEchHHhhccccCCeEEEEEeCCCCccCCCcEEEEEeCCCCEEEEEEeCCccCCCCCChHHHHHHHHHHHHhhc
Confidence 99999999888755799999999984 479999999999999999999999999989999999999998764
No 3
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=100.00 E-value=6e-162 Score=1327.02 Aligned_cols=526 Identities=49% Similarity=0.829 Sum_probs=493.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~ 80 (564)
||||||||||+||+|||+++||||+||++|||+|+++|+|||||||||||||+||||||||+||+|+||||||||||+|+
T Consensus 3 ~~~i~v~gg~~s~~gk~~~~~~l~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~~~~~~~~~~ 82 (545)
T 1s1m_A 3 TNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRT 82 (545)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECCSCSCGGGSCTTTSCCCEECTTSCEECTHHHHHHHHCSS
T ss_pred ceEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeeeeccccccCCCCccCcccCCCeEECCCCCeehhhhccceeeece
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 008476 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (564)
Q Consensus 81 ~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdies~pf~ 160 (564)
.|+++||+||||||++||+|||+|+|+|+|||++||||||||+||+++++ ++||||||+||||||||||||+
T Consensus 83 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~--------~~d~~i~e~~gt~~di~~~~~~ 154 (545)
T 1s1m_A 83 KMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGE--------GHDVVLVEIGGTVGDIESLPFL 154 (545)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHT--------TCSEEEEEECSCTTSSTTHHHH
T ss_pred eecCCCCeeccEEeeehhhhccccccccCceeehhHHHHHHHHHHHHHhc--------cCCEEEEECCCChhhhhChHHH
Confidence 99999999999999999999999999999999999999999999999983 7899999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEeeCCCCCcchhccccccCCCCCCC
Q 008476 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (564)
Q Consensus 161 ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~~~~l~~~~r~kisl~~~v~~~~ 240 (564)
||+||||+++|++|+|||||||||||+++||+|||||||||++|||.|||||+||||++++++++||+|+||||||++++
T Consensus 155 ~~~~q~~~~~~~~~~~~~h~~~~p~~~~~ge~ktkptq~sv~~l~s~gi~pd~lv~R~~~~~~~~~r~kisL~~~v~~~~ 234 (545)
T 1s1m_A 155 EAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKA 234 (545)
T ss_dssp HHHHHHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHTTTCCCSEEEEEESSCCCHHHHHHHHHTTCCCSSC
T ss_pred HHHHHHhHhhCcCcEEEEEEeCcccccCCCCcCCCCCcCCHHHHhCCCCccCEEEEeCCCCCCchhhccCChhhCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcccccHHHHHhhhHHHHHHHcCCCCCCCccchHHHHHHHhhhcCCCCceEEEEEeccCCCcchHHHHHHHH
Q 008476 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 320 (564)
Q Consensus 241 Vi~~~dvdtiy~vp~~L~~qG~~~~i~~~l~l~~~~~~~~~~~w~~~~~~~~~~~~~~~IavVGkY~~~~Day~SIi~aL 320 (564)
||++.|+||||+||++||+||++++++++++++ ...+++.+|.+++++++++...++||++|||..+.|+|.|+.++|
T Consensus 235 Vi~~~dvdt~y~lp~~lr~~G~~~~ii~~~~l~--~~~~~l~~w~~lv~~v~~~~~~v~i~~vGkyv~l~D~y~Si~~aL 312 (545)
T 1s1m_A 235 VISLKDVDSIYKIPGLLKSQGLDDYICKRFSLN--CPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEAL 312 (545)
T ss_dssp EEEEECCSCGGGHHHHHHHTTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHCCSEEEEEEEEESSCSSGGGGHHHHHHH
T ss_pred ceecCCCChHHHHHHHHHHcCChhhhhhhCCCC--chhHHHHHHHHHHHhccCCCCeEEeCCcCCeEEEEEHHHHHHHHH
Confidence 999999999999999999999999999999986 356688999999999999988999999999999999999999999
Q ss_pred HHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 008476 321 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (564)
Q Consensus 321 ~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGICLG 400 (564)
+++|+++.++|.+.|+++++++++ +++.+.++||||||||||++..++++.++++++++++|+||||||
T Consensus 313 ~~~G~~~~~~V~i~~~d~e~i~~~-----------~~~~l~~~DGIilsGGpg~~~~~g~~~~i~~a~~~~~PiLGIClG 381 (545)
T 1s1m_A 313 KHGGLKNRVSVNIKLIDSQDVETR-----------GVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLG 381 (545)
T ss_dssp HHHHHHHTEEEEEEEEEHHHHHHH-----------CTTTTTTCSEEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHhCcccCCeEEEccCCHHHhhhh-----------hhhhhhcCCEEEECCCCCCccchhhHHHHHHHHHCCCcEEEECCh
Confidence 999999888889999987655311 123478899999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccCCcccccCCCCCCCeeeec----------CCC-cccccCCceeecceeeEeecCCchhhhccCC
Q 008476 401 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFM----------PEG-SKTHMGGTMRLGSRRTYFQIKDCKSAKLYGN 469 (564)
Q Consensus 401 mQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m----------~e~-~~~~~GgtmrlG~~~v~l~~~~s~~~~iyg~ 469 (564)
||+|++++|+++++|++++|+||++.+.+|++.+| +++ ...++|++||+|.++|.+.++ +++..+|+
T Consensus 382 ~Qll~va~Gg~v~~l~~a~s~E~~~~~~hpvi~l~~~w~~~~g~~~~q~~~~~~ggtmrlG~~~v~l~~~-s~l~~iyg- 459 (545)
T 1s1m_A 382 MQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDD-SLVRQLYN- 459 (545)
T ss_dssp HHHHHHHHHHHHHCCTTCEETTTCSSCSCEEEECTTTCCCTTSCCC----------CCEEEEEEEEECTT-CHHHHHTT-
T ss_pred HHHHHHHhCCceecCCCCcccccCCCCCCceEEeecccccccccccccccccccCccccccceeeEeccC-CHHHHhcC-
Confidence 99999999999999999999999999999999988 442 356789999999999999887 89999996
Q ss_pred ceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhcc
Q 008476 470 RTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYFV 549 (564)
Q Consensus 470 ~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~~p~pLF~~Fv~aa~~~ 549 (564)
+..+.++|+|+|+||+.+.+.+++.|++++|+++||.++|++|++++|||+|||||||+.++|.++++||++|+++|.++
T Consensus 460 ~~~v~e~h~Hry~VNs~~~~~l~~~gl~v~a~s~dg~~VEaie~~~~p~flGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~ 539 (545)
T 1s1m_A 460 APTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEF 539 (545)
T ss_dssp SSEEEEEEEECCEECHHHHHHHHHTTCEEEEECSSSCCEEEEECTTSSSEEEESSCGGGTCCTTTCCHHHHHHHHHHHHH
T ss_pred CceEEEecCcceEEChHHhhhcccCCeEEEEECCCCCceEEEEeCCCCEEEEEeCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 56778999999999999998887789999999999977999999999999999999999999999999999999999764
No 4
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=100.00 E-value=3.8e-145 Score=1070.63 Aligned_cols=272 Identities=67% Similarity=1.118 Sum_probs=229.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~ 80 (564)
||||||||||+|||||||+|||||+|||+|||+||+||||||||||||||||||||||||||||+||||||||||||||+
T Consensus 23 mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (294)
T 2c5m_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (294)
T ss_dssp CEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCCCCC---------------------------------
T ss_pred eEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 008476 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (564)
Q Consensus 81 ~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdies~pf~ 160 (564)
+|||+||+||||||++||+|||||||||||||||||||||||+||+++|++|||+++.+|||||||||||||||||+||+
T Consensus 103 ~lt~~nNiTtGkIY~~VI~KERrGdYLGkTVQVIPHiTdeIk~~I~~~a~~pvd~~~~~~Dv~IiEiGGTVGDIES~PFl 182 (294)
T 2c5m_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (294)
T ss_dssp --CCTTEEEHHHHHHHHHHHHHTSCSCSSCCCTTTHHHHHHHHHHHHHTTCC------CCSEEEEEECSCTTCSTTHHHH
T ss_pred CCcccccccHHHHHHHHHHHHhcCCcCCceeEEcCCchHHHHHHHHHHhcCCccccCCCCCEEEEEeCCcchhhcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEeeCCCCCcchhccccccCCCCCCC
Q 008476 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (564)
Q Consensus 161 ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~~~~l~~~~r~kisl~~~v~~~~ 240 (564)
||+||||+++|++|+||||||||||++++||+||||||||||+|||+|||||+|+|||+.+++++.|+|||+||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlVP~i~~~gE~KTKPTQhSVk~Lr~~Gi~PDiivcRse~~l~~~~k~KIalfc~V~~~~ 262 (294)
T 2c5m_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (294)
T ss_dssp HHHHTTTTTSCTTTEEEEEEEECCCCTTTCSCCCHHHHHHHHHHHHTTCCCSEEEEECSSCCCTTHHHHHHHTTTCCCSC
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCCcHHHHHHHHHcCCCCCEEEEecCCCCCHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcccccHHHHHhhhHHHHHHHcCC
Q 008476 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNL 272 (564)
Q Consensus 241 Vi~~~dvdtiy~vp~~L~~qG~~~~i~~~l~l 272 (564)
||+++|++|+|+||++|++||+++.++++|+|
T Consensus 263 Vi~~~D~~~IY~VPl~l~~qgl~~~i~~~L~l 294 (294)
T 2c5m_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDL 294 (294)
T ss_dssp CEECCCCSCGGGHHHHHHTTTHHHHHHHHTTC
T ss_pred EEecCCcchHHHhhHHHHHCChHHHHHHHhCc
Confidence 99999999999999999999999999999976
No 5
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=100.00 E-value=2.3e-143 Score=1066.53 Aligned_cols=273 Identities=66% Similarity=1.114 Sum_probs=231.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~ 80 (564)
||||||||||+|||||||+|||||+|||+|||+|+++|||||||||||||||||||||||||||+||||||||||||||+
T Consensus 23 ~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (295)
T 2vo1_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (295)
T ss_dssp CEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCCC----------------------------------
T ss_pred ceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceecCCCCCChhhhceEEeecccccccccccchHhhccC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 008476 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (564)
Q Consensus 81 ~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdies~pf~ 160 (564)
+|+++||+||||||++||+|||||||||||||||||||||||+||+++|.+|+|+++.+|||||||||||||||||+|||
T Consensus 103 ~l~~~~niTtGkiY~~Vi~kERrGdYLG~TVQvIPHiTdeIk~~I~~~a~~~~~~~~~~~Dv~IvEiGGTVGDIEs~PFl 182 (295)
T 2vo1_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (295)
T ss_dssp -----CEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHSCCSSSCCCCSEEEEEECSCTTCGGGHHHH
T ss_pred CcCccccccHHHHHHHHHHHHHcCCCCCCeEEecCChhhHHHHHHHHhhcccccccCCCCCEEEEEcCceeccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEeeCCCCCcchhccccccCCCCCCC
Q 008476 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (564)
Q Consensus 161 ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~~~~l~~~~r~kisl~~~v~~~~ 240 (564)
||+||||+++|++|+||||||||||++++||+||||||||||+|||+|||||+|||||+.+++++.|+||||||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlvP~l~~~gE~KTKPTQhSVkeLr~~GIqPDiivcRse~pl~~~~k~KIAlFCnV~~~~ 262 (295)
T 2vo1_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (295)
T ss_dssp HHHHHHHHHSCGGGEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHhhcccceeEEEeeccccccccccccccchHhHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcccccHHHHHhhhHHHHHHHcCCC
Q 008476 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQ 273 (564)
Q Consensus 241 Vi~~~dvdtiy~vp~~L~~qG~~~~i~~~l~l~ 273 (564)
||+++|++|||+||+.|++||+++.++++|+|+
T Consensus 263 VI~~~Dv~sIYeVPl~L~~qgl~~~i~~~L~LP 295 (295)
T 2vo1_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDLP 295 (295)
T ss_dssp EEEECCCSSGGGHHHHHHHTTHHHHHHHHHTCC
T ss_pred EEEcCCcCcHHHHHHHHHHCCchHHHHHHcCCC
Confidence 999999999999999999999999999999985
No 6
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=100.00 E-value=1.6e-47 Score=392.42 Aligned_cols=266 Identities=52% Similarity=0.852 Sum_probs=223.8
Q ss_pred HHHHHHhhhcCCCCceEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccC
Q 008476 283 EWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKG 362 (564)
Q Consensus 283 ~w~~~~~~~~~~~~~~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~ 362 (564)
-|+.+++++.++..+++|||+|||...+++|.|+.++|+++|+++..+|.+.|+++++++......+++.|+++|+.+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~Iavv~d~~~~~~s~~si~~~L~~~G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (289)
T 2v4u_A 11 VDLGTENLYFQSMKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCK 90 (289)
T ss_dssp ------------CEEEEEEEEESCSSCCGGGHHHHHHHHHHHHHTTEEEEEEEEEGGGGSHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCcCCceEEEEEecCcCCCccHHHHHHHHHHhhhhhCCceEEEEechhhcccccccCChhhhhhHHHHHhh
Confidence 59999999999888899999999977888999999999999999888889999998776432222345667778888899
Q ss_pred CCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccc
Q 008476 363 ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH 442 (564)
Q Consensus 363 ~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~ 442 (564)
+||||||||||++...+.+.++++++++++|+||||+|||+|+.++|+++.+++++++.|+++++++|++.+|+++....
T Consensus 91 ~dgiil~GG~~~~~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h~~~~ 170 (289)
T 2v4u_A 91 ADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPGN 170 (289)
T ss_dssp CSEEEECSCCSSTTHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEECCBCCTTC
T ss_pred CCEEEecCCCCchhHHHHHHHHHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceecchhhcccc
Confidence 99999999999988889999999999999999999999999999999999999999999998888899999998755455
Q ss_pred cCCceeecceeeEee-cCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEE
Q 008476 443 MGGTMRLGSRRTYFQ-IKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIG 521 (564)
Q Consensus 443 ~GgtmrlG~~~v~l~-~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiG 521 (564)
+|++|++|++++.+. ++ +.+.++++....+.++|+|+|+||++++..+...|++++|+++||.++|++|++++||++|
T Consensus 171 ~~~~~~~g~~~v~~~~~~-s~l~~~~~~~~~v~~~H~H~y~vn~~~v~~l~~~g~~v~A~s~dg~~ieaie~~~~p~~lG 249 (289)
T 2v4u_A 171 LGGTMRLGIRRTVFKTEN-SILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPYFVG 249 (289)
T ss_dssp SSCBCEEEEEEEEESCSC-CHHHHHTTSCSEEEEEEEECEEECGGGSGGGTTSSEEEEEEETTSCSEEEEEESSSSCEEE
T ss_pred cCCccccceEEEEEecCC-CHHHHhcCCCceEEEecccccccCHHHHHhcccCCeEEEEEcCCCCeEEEEEcCCCCeEEE
Confidence 788999999999986 55 7888888643578899999999999999888448999999998885599999999999999
Q ss_pred EcccCCCcCCCCCchHHHHHHHHHHhcc
Q 008476 522 VQFHPEYKSRPGKPSPLFLGNISHLYFV 549 (564)
Q Consensus 522 vQFHPE~ss~p~~p~pLF~~Fv~aa~~~ 549 (564)
||||||+.++|.++++||++|+++|.++
T Consensus 250 vQfHPE~~~~~~~~~~lf~~Fv~~~~~~ 277 (289)
T 2v4u_A 250 VQFHPEFSSRPMKPSPPYLGLLLAATGN 277 (289)
T ss_dssp ESSBGGGGCBTTBCCHHHHHHHHHHHTC
T ss_pred EECCCCCCCCCCchHHHHHHHHHHHHhh
Confidence 9999999999888899999999998764
No 7
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=1.5e-44 Score=367.54 Aligned_cols=246 Identities=42% Similarity=0.701 Sum_probs=210.2
Q ss_pred ceEEEEEecc-CCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCC
Q 008476 297 PVRIAMVGKY-TGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (564)
Q Consensus 297 ~~~IavVGkY-~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r 375 (564)
+++|||+||| ..+.|+|.|+.++|+++|.+..+++.+.|+++++++..+ . .++++.+.++||||||||||++
T Consensus 8 ~~~Iaivg~y~~~~~dny~S~~~aL~~~g~~~~~~v~v~~~~~~~~~~~~----~---~~~~~~~~~~dgiil~GG~~~~ 80 (273)
T 2w7t_A 8 TVRIAFVGKYLQDAGDTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPN----A---DEARKALLGCDGIFVPGGFGNR 80 (273)
T ss_dssp CEEEEEEECCHHHHTTTTHHHHHHHHHHHHHHTCCEEEEEEEGGGGSSTT----T---HHHHHHHHTCSEEEECCCCTTT
T ss_pred CCEEEEEeCCCcCCchHHHHHHHHHHHHHHhcCCceEEeccChhhccccc----c---hhHHHHHhhCCEEEecCCCCCc
Confidence 3899999999 578899999999999999998888999999987664311 0 0122457899999999999998
Q ss_pred chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecceeeE
Q 008476 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (564)
Q Consensus 376 ~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~v~ 455 (564)
..++.+.++++++++++|+||||+|||+|+.++|+++.++++++|+|+++++++|++..|+ .....++++|++|++++.
T Consensus 81 ~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~v~ 159 (273)
T 2w7t_A 81 GVDGKCAAAQVARMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRIMD-CDRNKMGANMHLGACDVY 159 (273)
T ss_dssp THHHHHHHHHHHHHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEECCG-GGBCSSCBCCEEEEEEEE
T ss_pred CchhHHHHHHHHHHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceeecc-ccccccCCcccccceEEE
Confidence 8889999999999999999999999999999999999999999999998887788877663 333444567889999998
Q ss_pred eec-CCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCC----CCeEEEEEeCCCCcEEEEcccCCCcC
Q 008476 456 FQI-KDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET----SQRMEIVELPNHPYFIGVQFHPEYKS 530 (564)
Q Consensus 456 l~~-~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~d----g~~vE~ie~~~~pffiGvQFHPE~ss 530 (564)
+.. + +.+.++|+....++++|+|+|+|++++++.+++.++.++|+++| +..+|++|++++||++|||||||+++
T Consensus 160 ~~~~~-s~l~~~~~~~~~v~~~H~Hsy~v~~~~v~~l~~~g~~v~A~s~d~~~~g~~ieaie~~~~p~~~GvQfHPE~~~ 238 (273)
T 2w7t_A 160 IVEKS-SIMAKIYSKSNIVVERHRHRYEVNTAYFEDLRKAGLCISAVTDPTFSSRCRVEAVENPSLRFFLAVQFHPEFIS 238 (273)
T ss_dssp ECCTT-SHHHHHTTTCSEEEEEEEECCEECGGGHHHHHHTTCEEEEESCTTCCTTCCEEEEECTTSSSEEEESSCGGGSC
T ss_pred EecCC-cHHHHHhCCCceEEeecccccccCHHHHHhhccCCcEEEEEcCCcCCCCCeEEEEEcCCCCeEEEEeCCCCcCC
Confidence 863 5 67788886566788999999999999888775678999999988 54699999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHhccCC
Q 008476 531 RPGKPSPLFLGNISHLYFVCV 551 (564)
Q Consensus 531 ~p~~p~pLF~~Fv~aa~~~~~ 551 (564)
++.++++||++|+++|.++..
T Consensus 239 ~~~~~~~l~~~Fv~~~~~~~~ 259 (273)
T 2w7t_A 239 TPMDPAPTYLSFMAAAAKKDY 259 (273)
T ss_dssp BTTBCCHHHHHHHHHHHTCCC
T ss_pred CCCchHHHHHHHHHHHHHHHH
Confidence 998789999999999987643
No 8
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=100.00 E-value=1.9e-41 Score=358.76 Aligned_cols=292 Identities=21% Similarity=0.278 Sum_probs=219.6
Q ss_pred eeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEeeCCCCCcchhccccccCCCCCCCeeeeCCCCCcccccHHHHH
Q 008476 180 VSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRD 259 (564)
Q Consensus 180 ~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~~~~l~~~~r~kisl~~~v~~~~Vi~~~dvdtiy~vp~~L~~ 259 (564)
+---|.|+..|=-+ .+.||.+|++.++|||+.++.++|||++.||..|+++++|++|.++||| +|+++||+
T Consensus 53 ~~t~P~iGn~Gv~~--------~d~es~~~~~~g~vv~~~~~~~s~~~~~~~l~~~l~~~~i~gi~giDTR-~lt~~iR~ 123 (379)
T 1a9x_B 53 TLTYPHIGNVGTND--------ADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTR-KLTRLLRE 123 (379)
T ss_dssp EECSSBCCTTCCCG--------GGCSSSSCCBSEEECSBCCSCCCCTTCCSCHHHHHHHTTCEEEESSCHH-HHHHHHHH
T ss_pred EEcCCCccEEccCc--------hhhccccceEEEEEEccCCCCCCcccccCCHHHHHHHCCCccccCCCHH-HHHHHHHh
Confidence 33356676555422 4689999999999999999999999999999999999999999999999 99999999
Q ss_pred hhhHHHHHHHc-CCCCCCCccchHHHH-----HHHhhhcC-------CCC----------------ceEEEEEeccCCCc
Q 008476 260 QKAHEAIFKVL-NLQGTTKEPLLKEWT-----SRAEICDG-------LHE----------------PVRIAMVGKYTGLS 310 (564)
Q Consensus 260 qG~~~~i~~~l-~l~~~~~~~~~~~w~-----~~~~~~~~-------~~~----------------~~~IavVGkY~~~~ 310 (564)
+|.|++++..- ..+.......+..|. +++..++. +.. ..+|+++ ||+
T Consensus 124 ~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~vi-D~G--- 199 (379)
T 1a9x_B 124 KGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAY-DFG--- 199 (379)
T ss_dssp HCCEEEEEEESSSCCHHHHHHHHHHCCCSTTCBCHHHHSCSSCEEECCCCCBTTTBSCCCCCGGGCCEEEEEE-ESS---
T ss_pred cCCeeEEEecCCCCCHHHHHHHHHhCCCccccCccceeCCCCCEEeCCCCcccccccccccccccCCCEEEEE-ECC---
Confidence 99999877542 111000011222332 34444442 111 3689999 787
Q ss_pred chHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHh-ccCCCEEEeCCCCCCCch-hHHHHHHHHHH
Q 008476 311 DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL-LKGADGILVPGGFGNRGV-QGKILAAKYAR 388 (564)
Q Consensus 311 Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~-L~~~DGIllpGGfG~r~~-eg~i~~ir~a~ 388 (564)
...|++++|+.+|+.+.+ ++.+. . +.+. ..++||||||||||++.. ...+++++++.
T Consensus 200 -~k~ni~r~L~~~G~~v~v------vp~~~-~-------------~e~i~~~~~DGliLsGGPgdp~~~~~~~~~Ir~~~ 258 (379)
T 1a9x_B 200 -AKRNILRMLVDRGCRLTI------VPAQT-S-------------AEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFL 258 (379)
T ss_dssp -CCHHHHHHHHHTTEEEEE------EETTC-C-------------HHHHHTTCCSEEEECCCSBCSTTCHHHHHHHHHHT
T ss_pred -ChHHHHHHHHHCCCEEEE------EeccC-C-------------HHHHhhcCCCEEEEeCCCCChHHHHHHHHHHHHHH
Confidence 457899999999988754 22211 0 0011 237999999999999863 67889999999
Q ss_pred HcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecceeeEeecCCchhhhccC
Q 008476 389 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYG 468 (564)
Q Consensus 389 e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~v~l~~~~s~~~~iyg 468 (564)
++++|+||||||||+|+.++|+++.+++ .+|+|+ ++++...+.
T Consensus 259 ~~~~PILGIClG~QLLa~A~GG~v~k~~-----------------------~gh~g~-----n~pv~~~~~--------- 301 (379)
T 1a9x_B 259 ETDIPVFGICLGHQLLALASGAKTVKMK-----------------------FGHHGG-----NHPVKDVEK--------- 301 (379)
T ss_dssp TSCCCEEEETHHHHHHHHHTTCCEEEEE-----------------------EEEEEE-----EEEEEETTT---------
T ss_pred HcCCCEEEECchHHHHHHHhCcEEEecc-----------------------cccccC-----ceeeEecCC---------
Confidence 9899999999999999999999986542 356665 566542221
Q ss_pred CceeEeeeeceeeeeChhhhhhhccCCeEEEEEe-CCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHh
Q 008476 469 NRTFIDERHRHRYEVNPDMIARLENAGLSFTGKD-ETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLY 547 (564)
Q Consensus 469 ~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s-~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~~p~pLF~~Fv~aa~ 547 (564)
++..+ ..++|+|+|+++.+ +.++.+++.+ +|+. +|+++++++| ++|||||||++++|.+..+||++|++++.
T Consensus 302 g~v~i-ts~~H~~aV~~~~L----p~~~~v~a~s~~Dg~-ieai~~~~~p-i~gVQFHPE~~~~p~d~~~Lf~~Fl~~~~ 374 (379)
T 1a9x_B 302 NVVMI-TAQNHGFAVDEATL----PANLRVTHKSLFDGT-LQGIHRTDKP-AFSFQGNPEASPGPHDAAPLFDHFIELIE 374 (379)
T ss_dssp TEEEE-EEEEEEEEECSTTC----CTTEEEEEEETTTCC-EEEEEESSSS-EEEESSCTTCSSSCSTTTHHHHHHHHHHH
T ss_pred CcEEE-EecCccceEecccC----CCCeEEEEEeCCCCc-EEEEEECCCC-EEEEEeCCcCCCCcccHHHHHHHHHHHHH
Confidence 12223 57889999986533 4679999998 4665 9999999998 56999999999999888999999999986
Q ss_pred cc
Q 008476 548 FV 549 (564)
Q Consensus 548 ~~ 549 (564)
++
T Consensus 375 ~~ 376 (379)
T 1a9x_B 375 QY 376 (379)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 9
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.95 E-value=4.9e-28 Score=243.23 Aligned_cols=212 Identities=20% Similarity=0.277 Sum_probs=146.6
Q ss_pred ceEEEEEeccCC----------CcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEE
Q 008476 297 PVRIAMVGKYTG----------LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGI 366 (564)
Q Consensus 297 ~~~IavVGkY~~----------~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGI 366 (564)
++.|||..++.. ..-.+.+++++|+.+|+.+.+ ++..+-. ++.+.++++|||
T Consensus 4 ~p~IGi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~pv~------lp~~~~~------------~~~~~l~~~DGl 65 (254)
T 3fij_A 4 KPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIA------LPIDDPS------------TAVQAISLVDGL 65 (254)
T ss_dssp CCEEEEEC------------------CHHHHHHHHHHTCEEEE------ECCCCGG------------GHHHHHHTCSEE
T ss_pred CCEEEEeCCcccccccccCCcchhhhhHHHHHHHHHCCCEEEE------EeCCCch------------HHHHHHhhCCEE
Confidence 467999866321 111245899999999998744 2221110 022457899999
Q ss_pred EeCCCCC-------CCch-----------hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCC
Q 008476 367 LVPGGFG-------NRGV-----------QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTK 428 (564)
Q Consensus 367 llpGGfG-------~r~~-----------eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~ 428 (564)
|||||++ .... ...+.++++++++++|+||||+|||+|+.++|+++.. ++.+.. .
T Consensus 66 il~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~~--~~~~~~-~---- 138 (254)
T 3fij_A 66 LLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGTLYQ--DISQVE-T---- 138 (254)
T ss_dssp EECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHTTCCEES--SGGGSS-S----
T ss_pred EECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCceec--cccccc-C----
Confidence 9999965 2111 2378999999999999999999999999999999843 222110 0
Q ss_pred CCeeeecCCCcccccC-CceeecceeeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCe
Q 008476 429 NPCVIFMPEGSKTHMG-GTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQR 507 (564)
Q Consensus 429 ~~vi~~m~e~~~~~~G-gtmrlG~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~ 507 (564)
+ ...|+. ...++|.+++.+.++ +.+.+.++....++ ..|++.|. .+ +.++.++|.++||.
T Consensus 139 -~--------~~~h~~~~~~~~g~~~v~~~~~-s~l~~~~~~~~~v~--~~H~~~v~-----~l-~~g~~v~a~s~dg~- 199 (254)
T 3fij_A 139 -K--------ALQHLQRVDEQLGSHTIDIEPT-SELAKHHPNKKLVN--SLHHQFIK-----KL-APSFKVTARTADGM- 199 (254)
T ss_dssp -C--------CCCCBCCSCTTSCCEEEEECTT-SSGGGTCCTTEEEC--CBCSCEES-----SC-CSSEEEEEEETTCC-
T ss_pred -c--------cccccCCCCCccceEEEEeCCC-ChHHHhcCCcEEEE--Eeccchhh-----cc-CCCcEEEEEeCCCc-
Confidence 0 012222 234577889988877 66777775433343 34556654 23 67899999999885
Q ss_pred EEEEEeC-CCCcEEEEcccCCCcCCCCCc-hHHHHHHHHHHhccCCc
Q 008476 508 MEIVELP-NHPYFIGVQFHPEYKSRPGKP-SPLFLGNISHLYFVCVC 552 (564)
Q Consensus 508 vE~ie~~-~~pffiGvQFHPE~ss~p~~p-~pLF~~Fv~aa~~~~~~ 552 (564)
+|+++++ ++||++|||||||++++|... .+||++|+++|.++..+
T Consensus 200 ieai~~~~~~~~~~gvQfHPE~~~~~~~~~~~lf~~Fv~~~~~~~~~ 246 (254)
T 3fij_A 200 IEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTMVK 246 (254)
T ss_dssp EEEEEESSCSSCEEEESSCGGGTGGGCHHHHHHHHHHHHHHHSCC--
T ss_pred EEEEEecCCCCeEEEEEcCCccCCCCCchHHHHHHHHHHHHHHHHhh
Confidence 9999999 999899999999999987544 79999999999887643
No 10
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.93 E-value=3.3e-25 Score=216.91 Aligned_cols=189 Identities=21% Similarity=0.267 Sum_probs=134.9
Q ss_pred CceEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCC-CCC
Q 008476 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGG-FGN 374 (564)
Q Consensus 296 ~~~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGG-fG~ 374 (564)
.-+||.+++.|.... .++.++|+.+|+.+.+ ++.++ . .+.+.++|||||||| +++
T Consensus 12 ~~~~i~~id~~~~~~---~~~~~~l~~~G~~~~v------v~~~~-~--------------~~~l~~~DglIl~GG~p~~ 67 (212)
T 2a9v_A 12 HMLKIYVVDNGGQWT---HREWRVLRELGVDTKI------VPNDI-D--------------SSELDGLDGLVLSGGAPNI 67 (212)
T ss_dssp CCCBEEEEEESCCTT---CHHHHHHHHTTCBCCE------EETTS-C--------------GGGGTTCSEEEEEEECSCG
T ss_pred ccceEEEEeCCCccH---HHHHHHHHHCCCEEEE------EeCCC-C--------------HHHHhCCCEEEECCCCCCC
Confidence 457999996555332 3789999999988754 22221 0 034566999999999 787
Q ss_pred Cchh-HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeeccee
Q 008476 375 RGVQ-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 453 (564)
Q Consensus 375 r~~e-g~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~ 453 (564)
...+ ......+.++++++|+||||+|||+|+.++|+++...+ .+++ |.++
T Consensus 68 ~~~~~~~~~l~~~~~~~~~PiLGIC~G~Qll~~~lGg~v~~~~-----------------------~~~~------G~~~ 118 (212)
T 2a9v_A 68 DEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAK-----------------------HPEF------GKTK 118 (212)
T ss_dssp GGTGGGHHHHHHHHHHCCSCEEEETHHHHHHHHHTTCEEEEEE-----------------------EEEE------EEEE
T ss_pred CcccccchhHHHHHHhCCCCEEEEChHHHHHHHHhCCEEEcCC-----------------------Cccc------Ccee
Confidence 6432 23334566778899999999999999999999885421 1223 3456
Q ss_pred eEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCC
Q 008476 454 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPG 533 (564)
Q Consensus 454 v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~ 533 (564)
+.+.++ +.+.+.+++ .+..+|.|+|.+. .+ +.+++++|.++++. +++++++++| ++|+|||||++.++.
T Consensus 119 v~~~~~-~~l~~~~~~--~~~v~~~H~~~v~-----~l-~~~~~vlA~s~d~~-i~ai~~~~~~-i~gvQfHPE~~~~~~ 187 (212)
T 2a9v_A 119 VSVMHS-ENIFGGLPS--EITVWENHNDEII-----NL-PDDFTLAASSATCQ-VQGFYHKTRP-IYATQFHPEVEHTQY 187 (212)
T ss_dssp EEESCC-CGGGTTCCS--EEEEEEEEEEEEE-----SC-CTTEEEEEECSSCS-CSEEEESSSS-EEEESSCTTSTTSTT
T ss_pred eEECCC-ChhHhcCCC--ceEEEeEhhhhHh-----hC-CCCcEEEEEeCCCC-EEEEEECCCC-EEEEEeCCCCCCCcc
Confidence 666555 333333322 3456888999874 22 56899999998875 9999999877 679999999998654
Q ss_pred CchHHHHHHHHHHhcc
Q 008476 534 KPSPLFLGNISHLYFV 549 (564)
Q Consensus 534 ~p~pLF~~Fv~aa~~~ 549 (564)
...+|++|+++|.++
T Consensus 188 -g~~l~~~F~~~~~~~ 202 (212)
T 2a9v_A 188 -GRDIFRNFIGICASY 202 (212)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHh
Confidence 579999999988654
No 11
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.92 E-value=1.3e-24 Score=209.49 Aligned_cols=181 Identities=18% Similarity=0.250 Sum_probs=126.6
Q ss_pred EEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhcc--CCCEEEeCCCCCCCch
Q 008476 300 IAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRGV 377 (564)
Q Consensus 300 IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~--~~DGIllpGGfG~r~~ 377 (564)
|+|++.+.+. . .++.++|+.+|+++.+ ++.++.. ++.++ ++||||+|||+|.+..
T Consensus 4 i~iid~~~s~--~-~~~~~~l~~~G~~~~v------~~~~~~~--------------~~~~~~~~~dglil~gG~~~~~~ 60 (195)
T 1qdl_B 4 TLIIDNYDSF--V-YNIAQIVGELGSYPIV------IRNDEIS--------------IKGIERIDPDRLIISPGPGTPEK 60 (195)
T ss_dssp EEEEECSCSS--H-HHHHHHHHHTTCEEEE------EETTTSC--------------HHHHHHHCCSEEEECCCSSCTTS
T ss_pred EEEEECCCch--H-HHHHHHHHhCCCEEEE------EeCCCCC--------------HHHHhhCCCCEEEECCCCCChhh
Confidence 9999655533 2 3788999999987644 2222110 01222 6999999999988754
Q ss_pred ---h-HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeeccee
Q 008476 378 ---Q-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 453 (564)
Q Consensus 378 ---e-g~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~ 453 (564)
. ...++++++ +.++|+||||+|||+|+.++|+++...+. ..| |+ .++
T Consensus 61 ~~~~~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~~gg~v~~~~~----------------------~~~-g~-----~~~ 111 (195)
T 1qdl_B 61 REDIGVSLDVIKYL-GKRTPILGVCLGHQAIGYAFGAKIRRARK----------------------VFH-GK-----ISN 111 (195)
T ss_dssp HHHHTTHHHHHHHH-TTTSCEEEETHHHHHHHHHTTCEEEEEEE----------------------EEE-EE-----EEE
T ss_pred hhhhhHHHHHHHHh-cCCCcEEEEehHHHHHHHHhCCEEeccCC----------------------CcC-CC-----ceE
Confidence 2 234777775 77999999999999999999998854220 112 22 234
Q ss_pred eEeecCC--chhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEe-CCCCeEEEEEeCCCCcEEEEcccCCCcC
Q 008476 454 TYFQIKD--CKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKD-ETSQRMEIVELPNHPYFIGVQFHPEYKS 530 (564)
Q Consensus 454 v~l~~~~--s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s-~dg~~vE~ie~~~~pffiGvQFHPE~ss 530 (564)
+.+.+++ .++. .++ ..+..++.|+|.|. .+ +.+++++|.+ ++|. +++++++++| ++|+|||||++.
T Consensus 112 v~~~~~~~~~l~~-~~~--~~~~v~~~H~~~v~-----~l-~~~~~vla~s~~~g~-i~a~~~~~~~-~~gvQfHPE~~~ 180 (195)
T 1qdl_B 112 IILVNNSPLSLYY-GIA--KEFKATRYHSLVVD-----EV-HRPLIVDAISAEDNE-IMAIHHEEYP-IYGVQFHPESVG 180 (195)
T ss_dssp EEECCSSCCSTTT-TCC--SEEEEEEEEEEEEE-----CC-CTTEEEEEEESSSCC-EEEEEESSSS-EEEESSBTTSTT
T ss_pred EEECCCCHhHHHh-cCC--CceEEeccccchhh-----hC-CCCcEEEEEECCCCc-EEEEEeCCCC-EEEEecCCCCCC
Confidence 4443442 2333 332 23557888999885 22 5789999999 7875 9999999988 679999999998
Q ss_pred CCCCchHHHHHHHH
Q 008476 531 RPGKPSPLFLGNIS 544 (564)
Q Consensus 531 ~p~~p~pLF~~Fv~ 544 (564)
++. ...+|++|++
T Consensus 181 ~~~-g~~l~~~f~~ 193 (195)
T 1qdl_B 181 TSL-GYKILYNFLN 193 (195)
T ss_dssp CTT-HHHHHHHHHH
T ss_pred Ccc-HHHHHHHHHh
Confidence 663 6899999997
No 12
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.92 E-value=2.5e-24 Score=206.08 Aligned_cols=184 Identities=21% Similarity=0.214 Sum_probs=127.4
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEeCCCCCCCc
Q 008476 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNRG 376 (564)
Q Consensus 299 ~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIllpGGfG~r~ 376 (564)
.|+|+ ||+.. ...++.++|+.+|+.+.+ ++..+. . +.+ .++||||+|||+ ++.
T Consensus 2 mi~ii-d~~~~--~~~~~~~~l~~~G~~~~~------~~~~~~--------------~-~~~~~~~~dglil~Gg~-~~~ 56 (189)
T 1wl8_A 2 MIVIM-DNGGQ--YVHRIWRTLRYLGVETKI------IPNTTP--------------L-EEIKAMNPKGIIFSGGP-SLE 56 (189)
T ss_dssp EEEEE-ECSCT--THHHHHHHHHHTTCEEEE------EETTCC--------------H-HHHHHTCCSEEEECCCS-CTT
T ss_pred eEEEE-ECCCc--hHHHHHHHHHHCCCeEEE------EECCCC--------------h-HHhcccCCCEEEECCCC-Chh
Confidence 48999 55532 345899999999987654 222210 0 122 469999999998 554
Q ss_pred hh-HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecceeeE
Q 008476 377 VQ-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (564)
Q Consensus 377 ~e-g~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~v~ 455 (564)
.. ...+.++.+.+.++|+||||+|||+|+.++|+++..+. .+++|+ ..+.
T Consensus 57 ~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~~-----------------------~~~~G~------~~~~ 107 (189)
T 1wl8_A 57 NTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRGE-----------------------KAEYSL------VEIE 107 (189)
T ss_dssp CCTTHHHHHHTGGGTCSCEEEETHHHHHHHHHHTCEEEECS-----------------------CCSCEE------EEEE
T ss_pred hhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHHhCCceecCC-----------------------CcccCc------eeEE
Confidence 32 24677777668899999999999999999999885432 123344 2233
Q ss_pred eecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCc
Q 008476 456 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKP 535 (564)
Q Consensus 456 l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~~p 535 (564)
+...++++.. ++ ..+..+|.|...+. .+ +.+++++|.++++. +++++++++| ++|+|||||++..+ ..
T Consensus 108 ~~~~~~l~~~-~~--~~~~~~~~h~~~v~-----~l-~~~~~vla~s~~g~-i~a~~~~~~~-~~gvQfHPE~~~~~-~g 175 (189)
T 1wl8_A 108 IIDEXEIFKG-LP--KRLKVWESHMDEVK-----EL-PPKFKILARSETCP-IEAMKHEELP-IYGVQFHPEVAHTE-KG 175 (189)
T ss_dssp ESCC--CCTT-SC--SEEEEEECCSEEEE-----EC-CTTEEEEEEESSCS-CSEEEESSSC-EEEESSCTTSTTST-TH
T ss_pred EecCchHHhC-CC--CceEEEEEeeeehh-----hC-CCCcEEEEEcCCCC-EEEEEeCCce-EEEEecCCCcCCCc-ch
Confidence 3333233332 22 23445788877653 23 56899999999885 9999999988 67999999998766 35
Q ss_pred hHHHHHHHHHHhc
Q 008476 536 SPLFLGNISHLYF 548 (564)
Q Consensus 536 ~pLF~~Fv~aa~~ 548 (564)
..+|++|+++|++
T Consensus 176 ~~l~~~f~~~~~~ 188 (189)
T 1wl8_A 176 EEILRNFAKLCGE 188 (189)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhh
Confidence 7999999998753
No 13
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.91 E-value=4.5e-25 Score=214.33 Aligned_cols=199 Identities=17% Similarity=0.134 Sum_probs=120.4
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCchh
Q 008476 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (564)
Q Consensus 299 ~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~~e 378 (564)
||+|| ||+.. +..||.+||+++|+++.+ +.. | +.++++||||+||| |++...
T Consensus 4 ~I~ii-D~g~~--n~~si~~al~~~G~~~~v------~~~-----------~-------~~l~~~D~lilPG~-g~~~~~ 55 (211)
T 4gud_A 4 NVVII-DTGCA--NISSVKFAIERLGYAVTI------SRD-----------P-------QVVLAADKLFLPGV-GTASEA 55 (211)
T ss_dssp CEEEE-CCCCT--THHHHHHHHHHTTCCEEE------ECC-----------H-------HHHHHCSEEEECCC-SCHHHH
T ss_pred EEEEE-ECCCC--hHHHHHHHHHHCCCEEEE------ECC-----------H-------HHHhCCCEEEECCC-CCHHHH
Confidence 69999 89854 678999999999998754 211 1 45678899999964 554321
Q ss_pred ----HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCC-CcccccCCceeeccee
Q 008476 379 ----GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-GSKTHMGGTMRLGSRR 453 (564)
Q Consensus 379 ----g~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e-~~~~~~GgtmrlG~~~ 453 (564)
....+++.+++.++|+||||+|||+|+.++|+++...... .+.-...+.+|..+... ....+.++ ..
T Consensus 56 ~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~~~~--~~gl~~~~~~v~~~~~~~~~~~~~~~------~~ 127 (211)
T 4gud_A 56 MKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKGQKADEI--VQCLGLVDGEVRLLQTGDLPLPHMGW------NT 127 (211)
T ss_dssp HHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSEECCC----CCC--EECCCSSSCEEEECCCTTSCSSEEEE------EC
T ss_pred HHHHHhcChHHHHHHcCCCEEEEchhHhHHHHHhCCcccccCCc--cccceeccceEEEcccCCcceeeccc------ee
Confidence 1223467788899999999999999999988876543211 11000112222222111 12233333 23
Q ss_pred eEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCC
Q 008476 454 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPG 533 (564)
Q Consensus 454 v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~ 533 (564)
+.....++++..+.. .. ..++.|+|.+.+ +..++|.+++|. ..++.+.+.| ++|||||||+++.
T Consensus 128 ~~~~~~~~l~~~l~~-~~--~~~~~H~~~v~~---------~~~~~a~~~~g~-~~~~~v~~~~-v~GvQFHPE~s~~-- 191 (211)
T 4gud_A 128 VQVKEGHPLFNGIEP-DA--YFYFVHSFAMPV---------GDYTIAQCEYGQ-PFSAAIQAGN-YYGVQFHPERSSK-- 191 (211)
T ss_dssp CEECTTCGGGTTCCT-TC--CEEEEESEECCC---------CTTEEEEEESSS-EEEEEEEETT-EEEESSCGGGSHH--
T ss_pred eeeeccChhhcCCCC-Cc--EEEEEeeEEeCC---------CCeEEEEecCCC-eEEEEEeCCC-EEEEEccCEecCc--
Confidence 333344345555542 33 345678887753 234567777776 5566666677 5699999998632
Q ss_pred CchHHHHHHHHHHhcc
Q 008476 534 KPSPLFLGNISHLYFV 549 (564)
Q Consensus 534 ~p~pLF~~Fv~aa~~~ 549 (564)
....||++|++.|.++
T Consensus 192 ~G~~ll~nFl~~~ge~ 207 (211)
T 4gud_A 192 AGARLIQNFLELRGEN 207 (211)
T ss_dssp HHHHHHHHHHHC----
T ss_pred cHHHHHHHHHHHhccc
Confidence 2468999999876543
No 14
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.91 E-value=1.4e-24 Score=213.74 Aligned_cols=186 Identities=16% Similarity=0.109 Sum_probs=122.6
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCch
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~~ 377 (564)
.+|+|+ ||+.. .-.++.++|+.+|+.+.+ .+.+.+ .+ ++ + ..++||||||||++++..
T Consensus 25 ~~I~ii-D~g~~--~~~~i~~~l~~~G~~~~v----v~~~~~-~~------------~l-~-~~~~dglil~Gg~~~~~~ 82 (218)
T 2vpi_A 25 GAVVIL-DAGAQ--YGKVIDRRVRELFVQSEI----FPLETP-AF------------AI-K-EQGFRAIIISGGPNSVYA 82 (218)
T ss_dssp TCEEEE-ECSTT--TTHHHHHHHHHTTCCEEE----ECTTCC-HH------------HH-H-HHTCSEEEEEC-------
T ss_pred CeEEEE-ECCCc--hHHHHHHHHHHCCCEEEE----EECCCC-hH------------HH-h-hcCCCEEEECCCCccccc
Confidence 579999 67633 124899999999987644 222221 10 01 1 257999999999876532
Q ss_pred hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecceeeEee
Q 008476 378 QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQ 457 (564)
Q Consensus 378 eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~v~l~ 457 (564)
+......+.+++.++|+||||+|||+|+.++|+++...+ ..++| .+++.+.
T Consensus 83 ~~~~~~~~~~~~~~~PilGIC~G~Qll~~~~GG~v~~~~-----------------------~~~~G------~~~v~~~ 133 (218)
T 2vpi_A 83 EDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKS-----------------------VREDG------VFNISVD 133 (218)
T ss_dssp --CCCCCGGGGTSSCCEEEETHHHHHHHHHTTCCEEEEE-----------------------ECSCE------EEEEEEC
T ss_pred ccchhHHHHHHHcCCCEEEEcHHHHHHHHHhCCceEeCC-----------------------CCccc------EEEEEEc
Confidence 111112334567899999999999999999999885422 12233 4566666
Q ss_pred cCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchH
Q 008476 458 IKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSP 537 (564)
Q Consensus 458 ~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~~p~p 537 (564)
++ +.+.+.++.. ...++.|+|.|. .+ +.+++++|.+ ++ .+++++++++| ++|+|||||++.++. ..+
T Consensus 134 ~~-~~l~~~l~~~--~~v~~~H~~~v~-----~l-~~~~~vlA~s-~~-~i~ai~~~~~~-i~gvQfHPE~~~~~~-g~~ 200 (218)
T 2vpi_A 134 NT-CSLFRGLQKE--EVVLLTHGDSVD-----KV-ADGFKVVARS-GN-IVAGIANESKK-LYGAQFHPEVGLTEN-GKV 200 (218)
T ss_dssp TT-SGGGTTCCSE--EEEEECSEEEES-----SC-CTTCEEEEEE-TT-EEEEEEETTTT-EEEESSCTTSTTSTT-HHH
T ss_pred cC-ChhHhcCCCC--cEEeehhhhHhh-----hc-CCCCEEEEEc-CC-eEEEEEECCCC-EEEEEcCCCCCCChh-HHH
Confidence 55 3344444322 345678999885 23 5689999998 55 69999999888 669999999998765 589
Q ss_pred HHHHHH-HHHh
Q 008476 538 LFLGNI-SHLY 547 (564)
Q Consensus 538 LF~~Fv-~aa~ 547 (564)
||++|+ ++|.
T Consensus 201 l~~~F~~~~~~ 211 (218)
T 2vpi_A 201 ILKNFLYDIAG 211 (218)
T ss_dssp HHHHHHTTTTC
T ss_pred HHHHHHHHHhC
Confidence 999999 6653
No 15
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.91 E-value=2e-24 Score=223.65 Aligned_cols=205 Identities=16% Similarity=0.131 Sum_probs=128.3
Q ss_pred ceEEEEEeccCCCc--------chHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEe
Q 008476 297 PVRIAMVGKYTGLS--------DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILV 368 (564)
Q Consensus 297 ~~~IavVGkY~~~~--------Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIll 368 (564)
++.|||........ -...|++++|+.+|+.+.+ .+.+. +. +.+.+.++++|||||
T Consensus 30 ~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~v----v~~~~-~~------------~~i~~~l~~~dglil 92 (315)
T 1l9x_A 30 KPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVP----VRLDL-TE------------KDYEILFKSINGILF 92 (315)
T ss_dssp CCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEE----ECSSC-CH------------HHHHHHHHHSSEEEE
T ss_pred CCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEE----EecCC-CH------------HHHHHHHhcCCEEEE
Confidence 57899997543211 1223789999999988654 22221 11 112244678999999
Q ss_pred CCCCCCCc---h-hHHHHHHHHHHHc-----CCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCc
Q 008476 369 PGGFGNRG---V-QGKILAAKYAREH-----RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS 439 (564)
Q Consensus 369 pGGfG~r~---~-eg~i~~ir~a~e~-----~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~ 439 (564)
|||+++.. . +....+++.+++. ++|+||||+|||+|+.++|+++.... +
T Consensus 93 ~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~~~~------~---------------- 150 (315)
T 1l9x_A 93 PGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTA------T---------------- 150 (315)
T ss_dssp CCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCCCEE------E----------------
T ss_pred eCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCcccccc------c----------------
Confidence 99998742 1 1122345555554 69999999999999999999853211 0
Q ss_pred ccccCCceeecceeeEee---cCCchhhhccCC-------ceeEeeeeceeeeeChhhhhh--hccCCeEEEEEeCCCCe
Q 008476 440 KTHMGGTMRLGSRRTYFQ---IKDCKSAKLYGN-------RTFIDERHRHRYEVNPDMIAR--LENAGLSFTGKDETSQR 507 (564)
Q Consensus 440 ~~~~GgtmrlG~~~v~l~---~~~s~~~~iyg~-------~~~I~erh~HrYeVn~~~v~~--l~~~gl~~~a~s~dg~~ 507 (564)
+..|. ..++... ++ +.+.+.++. +..+.. ++|+|+|++++++. ..+.+++++|+++||.
T Consensus 151 -~~~g~-----~~p~~~~~~~~~-s~L~~~~~~~~~~~l~~~~~~~-~~H~~~V~~~~~~~~~~l~~g~~v~A~s~dg~- 221 (315)
T 1l9x_A 151 -DTVDV-----AMPLNFTGGQLH-SRMFQNFPTELLLSLAVEPLTA-NFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGK- 221 (315)
T ss_dssp -EEEEE-----EECCEECSTTTT-CSTTTTSCHHHHHHHHHSCCEE-EEEEEECBHHHHHTCHHHHHHEEEEEEEESSS-
T ss_pred -cccCC-----CCCeeeccCCCC-ChHHHhcChhhhhhccccceEE-EhhhhhcCccccccccccCCCCEEEEEcCCCC-
Confidence 01111 1222222 22 333333321 112323 48999999877654 2256899999999875
Q ss_pred EEEE---EeCCCCcEEEEcccCCCcC---C-----CC------CchHHHHHHHHHHhccC
Q 008476 508 MEIV---ELPNHPYFIGVQFHPEYKS---R-----PG------KPSPLFLGNISHLYFVC 550 (564)
Q Consensus 508 vE~i---e~~~~pffiGvQFHPE~ss---~-----p~------~p~pLF~~Fv~aa~~~~ 550 (564)
+|++ ++++.| ++|||||||++. + |+ +..+||++|+++|+++.
T Consensus 222 ve~i~~i~~~~~~-i~GVQfHPE~~~~e~~~~~~~p~s~~a~~~~~~lf~~Fv~~a~~~~ 280 (315)
T 1l9x_A 222 IEFISTMEGYKYP-VYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNN 280 (315)
T ss_dssp CEEEEEEEESSSC-EEEESSCTTHHHHCCSSCTTCCCCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred EEEEEEeccCCCC-EEEEEeCCCCCcccccccccCCccHHHHHHHHHHHHHHHHHHHhcc
Confidence 6666 566666 679999999975 2 32 22499999999997654
No 16
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.90 E-value=1.3e-23 Score=200.42 Aligned_cols=183 Identities=15% Similarity=0.189 Sum_probs=115.0
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCch
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~~ 377 (564)
+||+|++ + .++|.+++++|+++|+.+.+ ++.. +.+.++||||+|||++++..
T Consensus 1 m~i~vl~-~---~g~~~~~~~~l~~~G~~~~~------~~~~------------------~~~~~~dglil~GG~~~~~~ 52 (186)
T 2ywj_A 1 MIIGVLA-I---QGDVEEHEEAIKKAGYEAKK------VKRV------------------EDLEGIDALIIPGGESTAIG 52 (186)
T ss_dssp CEEEEEC-S---SSCCHHHHHHHHHTTSEEEE------ECSG------------------GGGTTCSEEEECCSCHHHHH
T ss_pred CEEEEEe-c---CcchHHHHHHHHHCCCEEEE------ECCh------------------HHhccCCEEEECCCCchhhh
Confidence 4799994 2 35889999999999986543 3321 24678899999999875421
Q ss_pred h--HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecceeeE
Q 008476 378 Q--GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (564)
Q Consensus 378 e--g~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~v~ 455 (564)
+ .....++.++++++|+||||+|||+|+.++|+++-++.- + +..+.. . . .|.. ...+...
T Consensus 53 ~~~~~~~~~~~i~~~~~PilGIC~G~Qll~~~~gg~~~~lg~-----~----~~~~~~-~-----~-~~~~--~~~~~~~ 114 (186)
T 2ywj_A 53 KLMKKYGLLEKIKNSNLPILGTCAGMVLLSKGTGINQILLEL-----M----DITVKR-N-----A-YGRQ--VDSFEKE 114 (186)
T ss_dssp HHHHHTTHHHHHHTCCCCEEEETHHHHHHSSCCSSCCCCCCC-----S----SEEEET-T-----T-TCSS--SCCEEEE
T ss_pred hhhhccCHHHHHHhcCCcEEEECHHHHHHHHHhCCCcCccCC-----C----ceeEEe-c-----c-CCCc--ccceecc
Confidence 1 011133334478999999999999999999877421110 0 000000 0 0 0110 1111111
Q ss_pred eecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCc
Q 008476 456 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKP 535 (564)
Q Consensus 456 l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~~p 535 (564)
.++..+ ..+..++.|+|.|+ .+++.+++++|.+ |+ .+|+++++ +++|+|||||+++. .
T Consensus 115 -----~~~~~~----~~~~~~~~H~~~v~-----~l~~~~~~v~a~s-d~-~~~a~~~~---~~~gvQfHPE~~~~---g 172 (186)
T 2ywj_A 115 -----IEFKDL----GKVYGVFIRAPVVD-----KILSDDVEVIARD-GD-KIVGVKQG---KYMALSFHPELSED---G 172 (186)
T ss_dssp -----EEETTT----EEEEEEESSCCEEE-----EECCTTCEEEEEE-TT-EEEEEEET---TEEEESSCGGGSTT---H
T ss_pred -----cccccC----CcEEEEEEecceee-----ecCCCCeEEEEEE-CC-EEEEEeeC---CEEEEECCCCcCCc---h
Confidence 112222 22334566887764 2224689999998 65 49999863 57899999998763 5
Q ss_pred hHHHHHHHHHHhc
Q 008476 536 SPLFLGNISHLYF 548 (564)
Q Consensus 536 ~pLF~~Fv~aa~~ 548 (564)
.++|++|+++|.+
T Consensus 173 ~~l~~~F~~~~~~ 185 (186)
T 2ywj_A 173 YKVYKYFVENCVK 185 (186)
T ss_dssp HHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHhh
Confidence 7999999998864
No 17
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.89 E-value=4.7e-23 Score=231.54 Aligned_cols=182 Identities=14% Similarity=0.137 Sum_probs=127.9
Q ss_pred ceEEEEEeccCCCcchH-HHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCC
Q 008476 297 PVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (564)
Q Consensus 297 ~~~IavVGkY~~~~Day-~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r 375 (564)
..+|+|++.|. +| .++.++|+..|+.+.+ .+.+.. ..+.++|||||+||||++
T Consensus 446 Gk~IlviD~gd----sf~~~l~~~l~~~G~~v~V----v~~d~~------------------~~~~~~DgIIlsGGPg~p 499 (645)
T 3r75_A 446 GCRALIVDAED----HFTAMIAQQLSSLGLATEV----CGVHDA------------------VDLARYDVVVMGPGPGDP 499 (645)
T ss_dssp TCEEEEEESSC----THHHHHHHHHHHTTCEEEE----EETTCC------------------CCGGGCSEEEECCCSSCT
T ss_pred CCEEEEEECCc----cHHHHHHHHHHHCCCEEEE----EECCCc------------------ccccCCCEEEECCCCCCh
Confidence 46899995433 44 4899999999987654 233321 124578999999999997
Q ss_pred chh------HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceee
Q 008476 376 GVQ------GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRL 449 (564)
Q Consensus 376 ~~e------g~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~Ggtmrl 449 (564)
... .+..+++++++.++|+||||+|||+|+.++|+++.+.+ .+++|+
T Consensus 500 ~d~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~alGG~V~~~~-----------------------~~~~G~---- 552 (645)
T 3r75_A 500 SDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRRE-----------------------VPNQGI---- 552 (645)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEE-----------------------EEEEEE----
T ss_pred hhhhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHhCCEEEcCC-----------------------Cccccc----
Confidence 543 36778899999999999999999999999999985432 134454
Q ss_pred cceeeEeecCCchhhhccCCceeEeeeeceeeeeCh--hhhh-hhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccC
Q 008476 450 GSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNP--DMIA-RLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHP 526 (564)
Q Consensus 450 G~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~--~~v~-~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHP 526 (564)
++++.+... +++..+| |+|.++. +.+. .+ +.+++++|.++++. ++++++++ ++||||||
T Consensus 553 -~~~i~~~~~-~l~~~~~-----------~~~~v~~~h~~~~~~l-p~g~~v~A~s~dg~-i~Ai~~~~---~~GVQFHP 614 (645)
T 3r75_A 553 -QVEIDLFGQ-RERVGFY-----------NTYVAQTVRDEMDVDG-VGTVAISRDPRTGE-VHALRGPT---FSSMQFHA 614 (645)
T ss_dssp -EEEEEETTE-EEEEEEE-----------EEEEEBCSCSEEEETT-TEEEEEEECTTTCB-EEEEEETT---EEEESSBT
T ss_pred -ceEEeeecC-cceecCC-----------CcEEEEEehhhccccC-CCCeEEEEEcCCCc-EEEEEcCC---EEEEEeCC
Confidence 233333221 2222233 3343321 1111 22 57899999998875 99999775 57999999
Q ss_pred CCcCCCCCchHHHHHHHHHHhccC
Q 008476 527 EYKSRPGKPSPLFLGNISHLYFVC 550 (564)
Q Consensus 527 E~ss~p~~p~pLF~~Fv~aa~~~~ 550 (564)
|+...+. +++||++|++.+....
T Consensus 615 E~~~t~~-G~~Ll~nFl~~~~~~~ 637 (645)
T 3r75_A 615 ESVLTVD-GPRILGEAITHAIRRE 637 (645)
T ss_dssp TSTTCTT-HHHHHHHHHHHHTTTT
T ss_pred eecCCcc-hHHHHHHHHHHHHhcc
Confidence 9998775 7899999999997654
No 18
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.88 E-value=5.6e-22 Score=190.50 Aligned_cols=188 Identities=16% Similarity=0.163 Sum_probs=118.0
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCC-CcccccccCCchhhhHHHHhcc--CCCEEEeCCCCCC
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPAC-DLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGN 374 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~-~le~~~~~~~p~~y~~~~~~L~--~~DGIllpGGfG~ 374 (564)
++|+||+.|++. -.++.++|+.+|+++.+ ++.. +.+ ++.+.+. +.|++|++||+|+
T Consensus 1 ~~i~iiDn~~s~---~~~i~~~l~~~G~~~~v------~~~~~~~~------------~i~~~l~~~~~~~iil~gGpg~ 59 (192)
T 1i1q_B 1 ADILLLDNIDSF---TWNLADQLRTNGHNVVI------YRNHIPAQ------------TLIDRLATMKNPVLMLSPGPGV 59 (192)
T ss_dssp CEEEEEECSCSS---HHHHHHHHHHTTCEEEE------EETTSCSH------------HHHHHHTTCSSEEEEECCCSSC
T ss_pred CcEEEEECCccH---HHHHHHHHHHCCCeEEE------EECCCCHH------------HHHHHhhhccCCeEEECCCCcC
Confidence 479999655532 24889999999987654 2221 111 1112222 3457999999999
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecceee
Q 008476 375 RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRT 454 (564)
Q Consensus 375 r~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~v 454 (564)
+...+....+..+.+.++|+||||+|||+|+.++|+++..... ...|.. ..
T Consensus 60 ~~~~~~~~~l~~~~~~~~PilGIC~G~Qll~~~~Gg~v~~~~~-----------------------~~~g~~------~~ 110 (192)
T 1i1q_B 60 PSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGE-----------------------ILHGKA------TS 110 (192)
T ss_dssp GGGSTTHHHHHHHHBTTBCEEEETHHHHHHHHHTSCCCCC--------------------------CCSSEE------EE
T ss_pred chhCchHHHHHHHHhcCCCEEEECcChHHHHHHhCCEEEeCCC-----------------------cEecce------eE
Confidence 7644433333334567899999999999999999987733210 011211 11
Q ss_pred EeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCC
Q 008476 455 YFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGK 534 (564)
Q Consensus 455 ~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~~ 534 (564)
....++.++..+- . ....++.|+|.+. .+ +.++.++|. .++ .++++++++.| ++|+|||||++..+.
T Consensus 111 ~~~~~~~l~~~~~-~--~~~v~~~H~~~v~-----~l-p~~~~v~a~-~~~-~~~ai~~~~~~-~~gvQfHPE~~~~~~- 177 (192)
T 1i1q_B 111 IEHDGQAMFAGLA-N--PLPVARYHSLVGS-----NV-PAGLTINAH-FNG-MVMAVRHDADR-VCGFQFHPESILTTQ- 177 (192)
T ss_dssp EEECCCGGGTTSC-S--SEEEEECCC---C-----CC-CTTCEEEEE-ETT-EEEEEEETTTT-EEEESSBTTSTTCTT-
T ss_pred EecCCChHHhcCC-C--CcEEEechhhHhh-----hC-CCccEEEEC-CCC-cEEEEEECCCC-EEEEEccCcccCCcc-
Confidence 1112223444332 2 2346777887764 23 567888884 344 59999999888 669999999997664
Q ss_pred chHHHHHHHHHHhc
Q 008476 535 PSPLFLGNISHLYF 548 (564)
Q Consensus 535 p~pLF~~Fv~aa~~ 548 (564)
...+|++|++.+.+
T Consensus 178 g~~il~nf~~~~~~ 191 (192)
T 1i1q_B 178 GARLLEQTLAWAQQ 191 (192)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHhc
Confidence 57899999987653
No 19
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.88 E-value=1.5e-22 Score=224.32 Aligned_cols=206 Identities=19% Similarity=0.261 Sum_probs=137.4
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEeCCCCCCC
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNR 375 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIllpGGfG~r 375 (564)
.+|+|+ ||+.. .-.+|.++|+.+|+.+.+ .+.+ .++ +.+ .++|||||||||+++
T Consensus 8 ~~Ilil-D~Gs~--~~~~I~r~lre~Gv~~ei----v~~~-~~~----------------~~i~~~~~dgIIlsGGp~s~ 63 (556)
T 3uow_A 8 DKILVL-NFGSQ--YFHLIVKRLNNIKIFSET----KDYG-VEL----------------KDIKDMNIKGVILSGGPYSV 63 (556)
T ss_dssp CEEEEE-ESSCT--THHHHHHHHHHTTCCEEE----EETT-CCG----------------GGTTTSCEEEEEECCCSCCT
T ss_pred CEEEEE-ECCCc--cHHHHHHHHHHCCCeEEE----EECC-CCH----------------HHHhhcCCCEEEECCCCCcc
Confidence 589999 78743 234999999999988754 2222 111 122 378999999999886
Q ss_pred chhH----HHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCC-------CC---CCCeeeecCCCccc
Q 008476 376 GVQG----KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDP-------NT---KNPCVIFMPEGSKT 441 (564)
Q Consensus 376 ~~eg----~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~-------~~---~~~vi~~m~e~~~~ 441 (564)
..++ ...+++.+.++++|+||||+|||+|+.++|+++.... +.|+.. .. .+|++..|++.. +
T Consensus 64 ~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~~---~~E~G~~~l~~~~~~~~~~~p~v~~~~~~~-~ 139 (556)
T 3uow_A 64 TEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSK---TSEYGCTDVNILRNDNINNITYCRNFGDSS-S 139 (556)
T ss_dssp TSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHHTTCEEEEEE---EEEEEEEEEEECCTTGGGGCSGGGGC---C-C
T ss_pred cccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHHhCCcEecCC---CcccCCcceeeccCcccccccceecccccc-c
Confidence 4322 2245666778899999999999999999999885432 233321 11 244555554322 4
Q ss_pred ccCCceeecceeeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEE
Q 008476 442 HMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIG 521 (564)
Q Consensus 442 ~~GgtmrlG~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiG 521 (564)
|+||. ...+.+...++++..++++ ....++.|++.|. .+ +.|+.++|.++++ .+++++++++| ++|
T Consensus 140 ~mg~~----~n~~~~~~~~~Lf~gl~~~--~~~v~~~H~d~V~-----~l-p~g~~vlA~s~~~-~i~ai~~~~~~-i~G 205 (556)
T 3uow_A 140 AMDLY----SNYKLMNETCCLFENIKSD--ITTVWMNHNDEVT-----KI-PENFYLVSSSENC-LICSIYNKEYN-IYG 205 (556)
T ss_dssp HHHHH----TTSCCCC--CGGGTTCCSS--EEEEEEEEEEEEE-----EC-CTTCEEEEEETTE-EEEEEEETTTT-EEE
T ss_pred ccccc----cccccccccchhhcccccC--ceEEEEEccceee-----cc-CCCcEEEEEeCCC-CEEEEEECCCC-EEE
Confidence 55542 1112222222456666432 3456788888773 22 5789999999887 49999999988 569
Q ss_pred EcccCCCcCCCCCchHHHHHHHHHH
Q 008476 522 VQFHPEYKSRPGKPSPLFLGNISHL 546 (564)
Q Consensus 522 vQFHPE~ss~p~~p~pLF~~Fv~aa 546 (564)
+|||||+++.|. ...+|++|+..+
T Consensus 206 vQFHPE~~~~~~-G~~ll~nFl~~i 229 (556)
T 3uow_A 206 VQYHPEVYESLD-GELMFYNFAYNI 229 (556)
T ss_dssp ESSCTTSTTSTT-HHHHHHHHHTTT
T ss_pred EEcCCCCCcccc-chHHHHHHHHHh
Confidence 999999998874 789999999543
No 20
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.88 E-value=4.7e-22 Score=198.05 Aligned_cols=188 Identities=16% Similarity=0.123 Sum_probs=127.5
Q ss_pred hcCCCCceEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecC-CCcccccccCCchhhhHHHHhccCCCEEEeC
Q 008476 291 CDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPA-CDLEDATEKENPDAYKAAWKLLKGADGILVP 369 (564)
Q Consensus 291 ~~~~~~~~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s-~~le~~~~~~~p~~y~~~~~~L~~~DGIllp 369 (564)
+..-.+.++|.++-.+. .. .-.++.++|+..|+++.+ ...+. +++ .+.+.++||||||
T Consensus 6 ~~~~~~~~~~~~i~~~~-~~-~~~~i~~~l~~~G~~v~v----~~~~~~~~~---------------~~~l~~~Dglil~ 64 (239)
T 1o1y_A 6 IHHHHHHVRVLAIRHVE-IE-DLGMMEDIFREKNWSFDY----LDTPKGEKL---------------ERPLEEYSLVVLL 64 (239)
T ss_dssp ----CCCCEEEEECSST-TS-SCTHHHHHHHHTTCEEEE----ECGGGTCCC---------------SSCGGGCSEEEEC
T ss_pred cccccceeEEEEEECCC-CC-CchHHHHHHHhCCCcEEE----eCCcCcccc---------------ccchhcCCEEEEC
Confidence 33334568999995443 22 345888999999987643 11221 111 1346789999999
Q ss_pred CCCCCCc-------hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccc
Q 008476 370 GGFGNRG-------VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH 442 (564)
Q Consensus 370 GGfG~r~-------~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~ 442 (564)
||++++. ......+++++.++++|+||||+|||+|+.++|+++...+. -.+
T Consensus 65 GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~alGG~v~~~~~----------------------g~~ 122 (239)
T 1o1y_A 65 GGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKVLGASVYRGKN----------------------GEE 122 (239)
T ss_dssp CCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEECTT----------------------CCE
T ss_pred CCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHHcCCeEecCCC----------------------CCc
Confidence 9986541 23578889999999999999999999999999998854210 012
Q ss_pred cCCceeecceeeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEE
Q 008476 443 MGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGV 522 (564)
Q Consensus 443 ~GgtmrlG~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGv 522 (564)
.|.+++...++ +.+.+.++ ..+..+|.|+|.+. + +.++.++|.++++. +|++++++ ++|+
T Consensus 123 ------~G~~~v~~~~~-~~l~~~~~--~~~~~~~~H~~~v~------l-p~~~~vlA~s~~~~-iea~~~~~---i~gv 182 (239)
T 1o1y_A 123 ------IGWYFVEKVSD-NKFFREFP--DRLRVFQWHGDTFD------L-PRRATRVFTSEKYE-NQGFVYGK---AVGL 182 (239)
T ss_dssp ------EEEEEEEECCC-CGGGTTSC--SEEEEEEEESEEEC------C-CTTCEEEEECSSCS-CSEEEETT---EEEE
T ss_pred ------cccEEEEECCC-CchHHhCC--CCceeEeecCCccc------c-CCCCEEEEEcCCCC-EEEEEECC---EEEE
Confidence 23455654444 33333332 23457888998872 2 56899999988875 89999985 7799
Q ss_pred cccCCCcCCCCCchHHHHHHHHHHh
Q 008476 523 QFHPEYKSRPGKPSPLFLGNISHLY 547 (564)
Q Consensus 523 QFHPE~ss~p~~p~pLF~~Fv~aa~ 547 (564)
|||||++. .++++|++...
T Consensus 183 QfHPE~~~------~~~~~~~~~~~ 201 (239)
T 1o1y_A 183 QFHIEVGA------RTMKRWIEAYK 201 (239)
T ss_dssp SSBSSCCH------HHHHHHHHHTH
T ss_pred EeCccCCH------HHHHHHHHHhH
Confidence 99999964 47888887543
No 21
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.88 E-value=8.7e-23 Score=224.97 Aligned_cols=187 Identities=20% Similarity=0.290 Sum_probs=126.3
Q ss_pred eEEEEEeccCCCcchH-HHHHHHHHHcCCcceeeeEEEE-ecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCC
Q 008476 298 VRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDW-IPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (564)
Q Consensus 298 ~~IavVGkY~~~~Day-~SIi~aL~~aG~~v~v~v~i~w-i~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r 375 (564)
.+|+|+ ||+. .| .+|.++|+.+|+.+.+. .| .+.+++ . -.++|||||||||++.
T Consensus 11 ~~I~Il-D~g~---~~~~~i~r~lr~~Gv~~~i~---p~~~~~~~i----------------~-~~~~dgIILsGGp~sv 66 (527)
T 3tqi_A 11 HRILIL-DFGS---QYAQLIARRVREIGVYCELM---PCDIDEETI----------------R-DFNPHGIILSGGPETV 66 (527)
T ss_dssp SEEEEE-ECSC---TTHHHHHHHHHHHTCEEEEE---ETTCCSSSS----------------T-TTCCSEEEECCCCC--
T ss_pred CeEEEE-ECCC---ccHHHHHHHHHHCCCeEEEE---ECCCCHHHH----------------H-hcCCCEEEECCcCccc
Confidence 589999 7873 34 48999999999887551 11 111111 0 1267999999999987
Q ss_pred chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecceeeE
Q 008476 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (564)
Q Consensus 376 ~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~v~ 455 (564)
..++...+.+.+.+.++|+||||+|||+|+.++|++|.... ..+ +|.+.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~lGG~V~~~~-----------------------~~e------~G~~~v~ 117 (527)
T 3tqi_A 67 TLSHTLRAPAFIFEIGCPVLGICYGMQTMAYQLGGKVNRTA-----------------------KAE------FGHAQLR 117 (527)
T ss_dssp -------CCCSTTTSSSCEEEETHHHHHHHHHSSSCBC----------------------------C------EEEEEEE
T ss_pred ccCCChhhHHHHHhcCCCEEEEChHHHHHHHHcCCeEEeCC-----------------------Ccc------ccceEEE
Confidence 55555555666778899999999999999999999884311 012 3345555
Q ss_pred eecCCchhhhccCC-----ceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcC
Q 008476 456 FQIKDCKSAKLYGN-----RTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 530 (564)
Q Consensus 456 l~~~~s~~~~iyg~-----~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss 530 (564)
+.+++.++..+... ......++.|+|.|. .+ +.|+.++|.++++ .+++++++++|+ +|+|||||++.
T Consensus 118 ~~~~~~l~~~l~~~~~~~~~~~~~v~~~H~d~v~-----~l-p~g~~v~A~s~~~-~i~ai~~~~~~~-~GvQFHPE~~~ 189 (527)
T 3tqi_A 118 VLNPAFLFDGIEDQVSPQGEPLLDVWMSHGDIVS-----EL-PPGFEATACTDNS-PLAAMADFKRRF-FGLQFHPEVTH 189 (527)
T ss_dssp ESSCTTTTSSCCSBCCTTSCCEEEEEEESSSCBC-----SC-CTTCEEEEEETTE-EEEEEECSSSCE-EEESBCSSSTT
T ss_pred EcCCChhhcCCccccccccccceEEEEEcccchh-----cc-CCCCEEEEEeCCC-cEEEEEcCCCCE-EEEEecccccc
Confidence 55543455555420 113456778888774 23 6789999999765 499999999985 69999999998
Q ss_pred CCCCchHHHHHHHHHH
Q 008476 531 RPGKPSPLFLGNISHL 546 (564)
Q Consensus 531 ~p~~p~pLF~~Fv~aa 546 (564)
+|. ...+|++|+..+
T Consensus 190 t~~-G~~ll~nF~~~i 204 (527)
T 3tqi_A 190 TPQ-GHRILAHFVIHI 204 (527)
T ss_dssp STT-HHHHHHHHHHTT
T ss_pred ccc-cchhhhhhhhhc
Confidence 875 589999999543
No 22
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.88 E-value=5.8e-22 Score=192.04 Aligned_cols=187 Identities=18% Similarity=0.152 Sum_probs=125.1
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCc-
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~- 376 (564)
++|+|+ +|.... ...++.++|+.+|+.+.+ ++.. +.+.++|+||||||++...
T Consensus 3 ~~i~il-~~~~~~-~~~~~~~~l~~~g~~~~~------~~~~------------------~~~~~~d~lil~Gg~~~~~~ 56 (213)
T 3d54_D 3 PRACVV-VYPGSN-CDRDAYHALEINGFEPSY------VGLD------------------DKLDDYELIILPGGFSYGDY 56 (213)
T ss_dssp CEEEEE-CCTTEE-EHHHHHHHHHTTTCEEEE------ECTT------------------CCCSSCSEEEECEECGGGGC
T ss_pred cEEEEE-EcCCCC-ccHHHHHHHHHCCCEEEE------EecC------------------CCcccCCEEEECCCCchhhh
Confidence 589999 676442 235889999999976644 2221 1256789999999965321
Q ss_pred --------hhHHHHHHHHHHHcCCCEEEEehhHHHHHHH--hccccccccCCcccccCCCCCCCeeeecCCCcccccCCc
Q 008476 377 --------VQGKILAAKYAREHRIPYLGICLGMQVAVIE--FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGT 446 (564)
Q Consensus 377 --------~eg~i~~ir~a~e~~iPiLGICLGmQll~ia--~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~Ggt 446 (564)
.....+.++.+.++++|+||||+|||+|+.+ +++++...+ . ...|.|
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~v~~~~--------------------~-~~~~~g-- 113 (213)
T 3d54_D 57 LRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGALLQNS--------------------S-GKFICK-- 113 (213)
T ss_dssp SSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSEEECCS--------------------S-SSCBCC--
T ss_pred hccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCCeecCC--------------------C-CceEee--
Confidence 1346788888888899999999999999988 555542110 0 001333
Q ss_pred eeecceeeEee-cCCchhhhccCCceeEeeeece---eeeeChhhhhhhccCCeEEEEEeCC--C--CeEEEEEeCCCCc
Q 008476 447 MRLGSRRTYFQ-IKDCKSAKLYGNRTFIDERHRH---RYEVNPDMIARLENAGLSFTGKDET--S--QRMEIVELPNHPY 518 (564)
Q Consensus 447 mrlG~~~v~l~-~~~s~~~~iyg~~~~I~erh~H---rYeVn~~~v~~l~~~gl~~~a~s~d--g--~~vE~ie~~~~pf 518 (564)
.+++.+. ++ +.+.+.++....+.....| +|.+.+ .++.++|.+.+ | ..+|++++++.+
T Consensus 114 ----~~~v~~~~~~-~~l~~~~~~~~~~~~~~~H~~~s~~~~~--------~~~~~~a~~~~~ng~~~~i~a~~~~~~~- 179 (213)
T 3d54_D 114 ----WVDLIVENND-TPFTNAFEKGEKIRIPIAHGFGRYVKID--------DVNVVLRYVKDVNGSDERIAGVLNESGN- 179 (213)
T ss_dssp ----EEEEEECCCS-STTSTTSCTTCEEEEECCBSSCEEECSS--------CCEEEEEESSCSSCCGGGEEEEECSSSC-
T ss_pred ----eEEEEeCCCC-CceeeccCCCCEEEEEeecCceEEEecC--------CCcEEEEEcCCCCCCccceeEEEcCCCC-
Confidence 3455554 33 3333333322234443345 888753 46788888765 6 469999997766
Q ss_pred EEEEcccCCCcCCC----CCchHHHHHHHHHHh
Q 008476 519 FIGVQFHPEYKSRP----GKPSPLFLGNISHLY 547 (564)
Q Consensus 519 fiGvQFHPE~ss~p----~~p~pLF~~Fv~aa~ 547 (564)
++|+|||||++... .....||++|++++.
T Consensus 180 ~~gvQfHPE~~~~~~~~~~~g~~l~~~f~~~~~ 212 (213)
T 3d54_D 180 VFGLMPHPERAVEELIGGEDGKKVFQSILNYLK 212 (213)
T ss_dssp EEEECSCSTTTTSTTTTCSTTSHHHHHHHHHCC
T ss_pred EEEEeCCHHHhcCHhhhcCccHHHHHHHHHHhh
Confidence 67999999999842 445799999998864
No 23
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.87 E-value=2.1e-22 Score=194.28 Aligned_cols=185 Identities=21% Similarity=0.213 Sum_probs=117.7
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcC-----CcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCC
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHAS-----VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG-----~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGf 372 (564)
++|+|+ +|+.. ++.|+.++|+.+| +++.+ ++.. +. .++||||||||
T Consensus 1 m~I~ii-d~~~g--~~~s~~~~l~~~G~~~~~~~~~~------~~~~------------------~~-~~~dglilpG~- 51 (201)
T 1gpw_B 1 MRIGII-SVGPG--NIMNLYRGVKRASENFEDVSIEL------VESP------------------RN-DLYDLLFIPGV- 51 (201)
T ss_dssp CEEEEE-CCSSS--CCHHHHHHHHHHSTTBSSCEEEE------ECSC------------------CS-SCCSEEEECCC-
T ss_pred CEEEEE-ecCCc--hHHHHHHHHHHcCCCCCceEEEE------ECCC------------------cc-cCCCEEEECCC-
Confidence 489999 78733 6789999999999 55433 3221 12 57899999884
Q ss_pred CCCchh-------HHHHHHHHHHHcCCCEEEEehhHHHHHHHhc--cccccccCCcccccCCCCCCCeeeecCCCccccc
Q 008476 373 GNRGVQ-------GKILAAKYAREHRIPYLGICLGMQVAVIEFA--RSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHM 443 (564)
Q Consensus 373 G~r~~e-------g~i~~ir~a~e~~iPiLGICLGmQll~ia~g--~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~ 443 (564)
|+++.. +..+.++.+.++++|+||||+|||+|+.+++ ++.-++.- + +..+ ..++....+|+
T Consensus 52 g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~g~~G~~~~l~~-----~----~g~v-~~~~~~~~~~~ 121 (201)
T 1gpw_B 52 GHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSL-----I----EGNV-VKLRSRRLPHM 121 (201)
T ss_dssp SCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEETTEEEEECCCS-----S----SEEE-EECCCSSCSEE
T ss_pred CcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhhccCCCCCCcce-----e----eeEE-EEcCCCCCCcc
Confidence 554321 3567888888899999999999999998886 22111100 0 0011 11110012333
Q ss_pred CCceeecceeeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCC-CCeEEEEEeCCCCcEEEE
Q 008476 444 GGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET-SQRMEIVELPNHPYFIGV 522 (564)
Q Consensus 444 GgtmrlG~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~d-g~~vE~ie~~~~pffiGv 522 (564)
|+ +++..... + .....++.|+|.|.+. ++.++|.+++ |..++++++++ | ++|+
T Consensus 122 g~------~~l~~~~~-~---------~~~~v~~~H~~~v~~~--------~~~vla~s~~~g~~~~a~~~~~-~-i~gv 175 (201)
T 1gpw_B 122 GW------NEVIFKDT-F---------PNGYYYFVHTYRAVCE--------EEHVLGTTEYDGEIFPSAVRKG-R-ILGF 175 (201)
T ss_dssp EE------EEEEESSS-S---------CCEEEEEEESEEEEEC--------GGGEEEEEEETTEEEEEEEEET-T-EEEE
T ss_pred cc------eeeEeccC-C---------CCCeEEEECcceeccC--------CCEEEEEEccCCceEEEEEECC-C-EEEE
Confidence 32 23322211 0 1233566788887532 3567888765 64599999876 5 7799
Q ss_pred cccCCCcCCCCCchHHHHHHHHHHhcc
Q 008476 523 QFHPEYKSRPGKPSPLFLGNISHLYFV 549 (564)
Q Consensus 523 QFHPE~ss~p~~p~pLF~~Fv~aa~~~ 549 (564)
|||||+++ .....+|++|++++..+
T Consensus 176 QfHPE~~~--~~~~~l~~~f~~~~~~~ 200 (201)
T 1gpw_B 176 QFHPEKSS--KIGRKLLEKVIECSLSR 200 (201)
T ss_dssp SSCGGGSH--HHHHHHHHHHHHHSSCC
T ss_pred ECCCcccC--HhHHHHHHHHHHHhhcC
Confidence 99999983 33468999999987654
No 24
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.87 E-value=2.4e-22 Score=221.32 Aligned_cols=187 Identities=17% Similarity=0.262 Sum_probs=126.6
Q ss_pred eEEEEEeccCCCcchH-HHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCc
Q 008476 298 VRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (564)
Q Consensus 298 ~~IavVGkY~~~~Day-~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~ 376 (564)
.+|+|+ ||+.. | .++.++|+.+|+.+.+ .+.+. +.+ ++ +.+ ++|||||||||++..
T Consensus 8 ~~IlIl-D~g~~---~~~~i~r~lr~~G~~~~i----~p~~~-~~~------------~i-~~~-~~dgiILsGGp~s~~ 64 (525)
T 1gpm_A 8 HRILIL-DFGSQ---YTQLVARRVRELGVYCEL----WAWDV-TEA------------QI-RDF-NPSGIILSGGPESTT 64 (525)
T ss_dssp SEEEEE-ECSCT---THHHHHHHHHHTTCEEEE----EESCC-CHH------------HH-HHH-CCSEEEECCCSSCTT
T ss_pred CEEEEE-ECCCc---cHHHHHHHHHHCCCEEEE----EECCC-CHH------------HH-hcc-CCCEEEECCcCcccc
Confidence 589999 78743 4 4799999999987644 12221 110 01 112 679999999998753
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecceeeEe
Q 008476 377 VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYF 456 (564)
Q Consensus 377 ~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~v~l 456 (564)
.++.....+.+.+.++|+||||+|||+|+.++|++|.... . .+ +|.+.+.+
T Consensus 65 ~~~~~~~~~~~~~~g~PvLGIC~G~Qlla~~~GG~V~~~~---~--------------------~e------~G~~~v~~ 115 (525)
T 1gpm_A 65 EENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASN---E--------------------RE------FGYAQVEV 115 (525)
T ss_dssp STTCCCCCGGGGTSSSCEEEETHHHHHHHHHHTCEEECCS---S--------------------CE------EEEEEEEE
T ss_pred ccCCcchHHHHHHCCCCEEEEChHHHHHHHHcCCEEEeCC---C--------------------cc------cceEEEEe
Confidence 3221222345567899999999999999999999985421 1 12 22344444
Q ss_pred ecCCchhhhccCCc------eeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcC
Q 008476 457 QIKDCKSAKLYGNR------TFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 530 (564)
Q Consensus 457 ~~~~s~~~~iyg~~------~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss 530 (564)
.+++.++..+- .. .....++.|++.|. .+ +.|++++|.++++. +++++++++| ++|+|||||++.
T Consensus 116 ~~~~~L~~~l~-~~~~~~~~~~~~v~~~H~~~V~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~-i~gvQFHPE~~~ 186 (525)
T 1gpm_A 116 VNDSALVRGIE-DALTADGKPLLDVWMSHGDKVT-----AI-PSDFITVASTESCP-FAIMANEEKR-FYGVQFHPEVTH 186 (525)
T ss_dssp CSCCTTTTTCC-SEECTTSCEEEEEEEEECSEEE-----EC-CTTCEEEEECSSCS-CSEEEETTTT-EEEESBCTTSTT
T ss_pred CCCCHhhccCc-cccccccccceEEEEEccceee-----eC-CCCCEEEEECCCCC-EEEEEECCCC-EEEEecCCCCCc
Confidence 44423333332 20 12345677887764 23 67899999998875 9999999887 569999999998
Q ss_pred CCCCchHHHHHHHHHH
Q 008476 531 RPGKPSPLFLGNISHL 546 (564)
Q Consensus 531 ~p~~p~pLF~~Fv~aa 546 (564)
+|. ...+|++|+..+
T Consensus 187 ~~~-g~~ll~nF~~~i 201 (525)
T 1gpm_A 187 TRQ-GMRMLERFVRDI 201 (525)
T ss_dssp STT-HHHHHHHHHHTT
T ss_pred chh-HHHHHHHHHHhh
Confidence 875 689999999543
No 25
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.86 E-value=3.8e-22 Score=218.72 Aligned_cols=181 Identities=18% Similarity=0.163 Sum_probs=124.6
Q ss_pred EEEEeccCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhcc--CCCEEEeCCCCCCCc
Q 008476 300 IAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRG 376 (564)
Q Consensus 300 IavVGkY~~~~Day~-SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~--~~DGIllpGGfG~r~ 376 (564)
|+|+ ||+. .|. +|.++|+.+|+.+.+ .+.+. +. +.++ ++|||||||||++..
T Consensus 2 i~il-D~g~---~~~~~i~r~l~~~G~~~~i----~p~~~-~~----------------~~i~~~~~dgiIlsGGp~s~~ 56 (503)
T 2ywb_A 2 VLVL-DFGS---QYTRLIARRLRELRAFSLI----LPGDA-PL----------------EEVLKHRPQALILSGGPRSVF 56 (503)
T ss_dssp EEEE-ESSC---TTHHHHHHHHHTTTCCEEE----EETTC-CH----------------HHHHTTCCSEEEECCCSSCSS
T ss_pred EEEE-ECCC---cHHHHHHHHHHHCCCEEEE----EECCC-CH----------------HHHHhcCCCEEEECCCCchhc
Confidence 8899 7873 344 899999999988754 22221 11 1222 569999999998753
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecceeeEe
Q 008476 377 VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYF 456 (564)
Q Consensus 377 ~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~v~l 456 (564)
.+......+.+.+.++|+||||+|||+|+.++|+++.... . .+.| .+.+.+
T Consensus 57 ~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~~GG~v~~~~---~--------------------~e~G------~~~v~~ 107 (503)
T 2ywb_A 57 DPDAPRPDPRLFSSGLPLLGICYGMQLLAQELGGRVERAG---R--------------------AEYG------KALLTR 107 (503)
T ss_dssp CTTCCCCCGGGGCSSCCEEEETHHHHHHHHTTTCEEECC--------------------------CEE------EEECSE
T ss_pred cCCCcchHHHHHhCCCCEEEECHHHHHHHHHhCCeEeeCC---C--------------------Cccc------eEEEEe
Confidence 2221122345567899999999999999999999985421 0 1223 334444
Q ss_pred ecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCch
Q 008476 457 QIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPS 536 (564)
Q Consensus 457 ~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~~p~ 536 (564)
.+ +.++..+- +.. ..++.|+|.|. .+ +.|++++|.++++. +++++++++| ++|+|||||++.+|. ..
T Consensus 108 ~~-~~l~~~~~-~~~--~v~~~H~~~v~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~-~~gvQFHPE~~~~~~-g~ 174 (503)
T 2ywb_A 108 HE-GPLFRGLE-GEV--QVWMSHQDAVT-----AP-PPGWRVVAETEENP-VAAIASPDGR-AYGVQFHPEVAHTPK-GM 174 (503)
T ss_dssp EC-SGGGTTCC-SCC--EEEEECSCEEE-----EC-CTTCEEEEECSSCS-CSEEECTTSS-EEEESBCTTSTTSTT-HH
T ss_pred cC-cHHhhcCC-Ccc--EEEEECCCccc-----cC-CCCCEEEEEECCCC-EEEEEeCCCC-EEEEecCCCcccccc-cH
Confidence 33 24444442 233 34677888874 23 67899999998875 9999999888 569999999998875 68
Q ss_pred HHHHHHHHHHh
Q 008476 537 PLFLGNISHLY 547 (564)
Q Consensus 537 pLF~~Fv~aa~ 547 (564)
.+|++|++.|.
T Consensus 175 ~ll~~F~~~~~ 185 (503)
T 2ywb_A 175 QILENFLELAG 185 (503)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhh
Confidence 99999996653
No 26
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.84 E-value=4.2e-20 Score=183.30 Aligned_cols=183 Identities=16% Similarity=0.151 Sum_probs=125.2
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCc-
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~- 376 (564)
+||+++ ..... +....+.+.|+..|+++.+ ..+...+.. | +.+.++||||||||++++.
T Consensus 1 m~i~vi-~h~~~-e~~g~~~~~l~~~g~~~~~----~~~~~~~~~-------p-------~~~~~~d~lii~GGp~~~~~ 60 (236)
T 3l7n_A 1 MRIHFI-LHETF-EAPGAYLAWAALRGHDVSM----TKVYRYEKL-------P-------KDIDDFDMLILMGGPQSPSS 60 (236)
T ss_dssp CEEEEE-ECCTT-SCCHHHHHHHHHTTCEEEE----EEGGGTCCC-------C-------SCGGGCSEEEECCCSSCTTC
T ss_pred CeEEEE-eCCCC-CCchHHHHHHHHCCCeEEE----EeeeCCCCC-------C-------CCccccCEEEECCCCCCccc
Confidence 478887 44333 3566888999999988754 222221110 0 2367899999999998842
Q ss_pred -------h--hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCce
Q 008476 377 -------V--QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTM 447 (564)
Q Consensus 377 -------~--eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~Ggtm 447 (564)
+ .....+++.+.+.++|+||||+|||+|+.++|+++.... .+++|
T Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~~Gg~v~~~~-----------------------~~~~G--- 114 (236)
T 3l7n_A 61 TKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVAYGADYLHSP-----------------------KKEIG--- 114 (236)
T ss_dssp CTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHHTTCCCEEEE-----------------------EEEEE---
T ss_pred ccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHHhCCEEecCC-----------------------Cceee---
Confidence 1 336789999999999999999999999999998874321 12333
Q ss_pred eecceeeEeecC---CchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcc
Q 008476 448 RLGSRRTYFQIK---DCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQF 524 (564)
Q Consensus 448 rlG~~~v~l~~~---~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQF 524 (564)
.+++.+.+. +.++..+- ..+..+|.|++.. .+ +.+++++|.+.++. ++++++.+ + ++|+||
T Consensus 115 ---~~~v~~~~~~~~~~l~~~~~---~~~~v~~~H~~~~------~l-p~~~~vla~s~~~~-~~a~~~~~-~-v~gvQf 178 (236)
T 3l7n_A 115 ---NYLISLTEAGKMDSYLSDFS---DDLLVGHWHGDMP------GL-PDKAQVLAISQGCP-RQIIKFGP-K-QYAFQC 178 (236)
T ss_dssp ---EEEEEECTTGGGCGGGTTSC---SEEEEEEEEEEEC------CC-CTTCEEEEECSSCS-CSEEEEET-T-EEEESS
T ss_pred ---eEEEEEccCcccChHHhcCC---CCcEEEEecCCcc------cC-CChheEEEECCCCC-EEEEEECC-C-EEEEEe
Confidence 456665542 23333322 2344567777542 22 56899999998775 89999875 3 779999
Q ss_pred cCCCcCCCCCchHHHHHHHHHHhc
Q 008476 525 HPEYKSRPGKPSPLFLGNISHLYF 548 (564)
Q Consensus 525 HPE~ss~p~~p~pLF~~Fv~aa~~ 548 (564)
|||++ ..++++|++....
T Consensus 179 HPE~~------~~~~~~~~~~~~~ 196 (236)
T 3l7n_A 179 HLEFT------PELVAALIAQEDD 196 (236)
T ss_dssp BSSCC------HHHHHHHHHHCSC
T ss_pred CCCCC------HHHHHHHHHhhhh
Confidence 99997 4688999887643
No 27
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.84 E-value=9.8e-21 Score=180.59 Aligned_cols=181 Identities=15% Similarity=0.185 Sum_probs=114.8
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCC-c
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-G 376 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r-~ 376 (564)
++|||+. + .+++.++.++|+.+|+.+.+ ++.. +.+.++|||++|||++.. .
T Consensus 3 p~Igi~~-~---~~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~dglil~GG~~~~~~ 54 (191)
T 2ywd_A 3 GVVGVLA-L---QGDFREHKEALKRLGIEAKE------VRKK------------------EHLEGLKALIVPGGESTTIG 54 (191)
T ss_dssp CCEEEEC-S---SSCHHHHHHHHHTTTCCCEE------ECSG------------------GGGTTCSEEEECSSCHHHHH
T ss_pred cEEEEEe-c---CCchHHHHHHHHHCCCEEEE------eCCh------------------hhhccCCEEEECCCChhhhH
Confidence 6799994 3 34788999999999988754 2211 235679999999996431 1
Q ss_pred -h---hHHHHHHHHHHHcC-CCEEEEehhHHHHHHHhcc-ccccccCCcccccCCCCCCCeeeecCCCcccccCCceeec
Q 008476 377 -V---QGKILAAKYAREHR-IPYLGICLGMQVAVIEFAR-SVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLG 450 (564)
Q Consensus 377 -~---eg~i~~ir~a~e~~-iPiLGICLGmQll~ia~g~-~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG 450 (564)
. ....+.++.+.+++ +|+||||+|||+|+.++|+ ++. ++... + +..+. . ...|.. ..
T Consensus 55 ~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~~gg~~~~--~~lg~--~----~~~~~--~-----~~~g~~--~~ 117 (191)
T 2ywd_A 55 KLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKEIVGYPEQ--PRLGV--L----EAWVE--R-----NAFGRQ--VE 117 (191)
T ss_dssp HHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEEETTCTTC--CCCCC--E----EEEEE--T-----TCSCCS--SS
T ss_pred HhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHHhCCCCCC--ccccc--c----ceEEE--c-----CCcCCc--cc
Confidence 1 24567888888889 9999999999999999887 431 11000 0 00000 0 001110 01
Q ss_pred ceeeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcC
Q 008476 451 SRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 530 (564)
Q Consensus 451 ~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss 530 (564)
.+... ..+..+ ..+...+.|+|.+. .+ +.++.++|.+ + ..+|++++.+ ++|+|||||+++
T Consensus 118 ~~~~~-----~~~~~~----~~~~~~~~Hs~~v~-----~l-~~~~~~~a~~-~-~~~~a~~~~~---~~gvQfHPE~~~ 177 (191)
T 2ywd_A 118 SFEED-----LEVEGL----GSFHGVFIRAPVFR-----RL-GEGVEVLARL-G-DLPVLVRQGK---VLASSFHPELTE 177 (191)
T ss_dssp EEEEE-----EEETTT----EEEEEEEESCCEEE-----EE-CTTCEEEEEE-T-TEEEEEEETT---EEEESSCGGGSS
T ss_pred ccccc-----ccccCC----CceeEEEEccccee-----cc-CCCcEEEEEE-C-CEEEEEEECC---EEEEEeCCCCCC
Confidence 11000 011111 22344566777663 12 4578899988 5 4599999864 789999999876
Q ss_pred CCCCchHHHHHHHHHHh
Q 008476 531 RPGKPSPLFLGNISHLY 547 (564)
Q Consensus 531 ~p~~p~pLF~~Fv~aa~ 547 (564)
. + .+|++|+++|.
T Consensus 178 ~---~-~l~~~f~~~~~ 190 (191)
T 2ywd_A 178 D---P-RLHRYFLELAG 190 (191)
T ss_dssp C---C-HHHHHHHHHHT
T ss_pred C---c-HHHHHHHHHhc
Confidence 3 3 89999998864
No 28
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.84 E-value=2.4e-20 Score=187.30 Aligned_cols=173 Identities=16% Similarity=0.211 Sum_probs=119.4
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCC--
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-- 375 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r-- 375 (564)
.+|.++ ..... ....++.++|+..|+++.+. .+...+.. | +.+.++||||||||++++
T Consensus 4 ~~vlii-qh~~~-e~~~~i~~~l~~~G~~v~v~----~~~~~~~~-------p-------~~~~~~d~lIl~GGp~~~~d 63 (250)
T 3m3p_A 4 KPVMII-QFSAS-EGPGHFGDFLAGEHIPFQVL----RMDRSDPL-------P-------AEIRDCSGLAMMGGPMSAND 63 (250)
T ss_dssp CCEEEE-ESSSS-CCCHHHHHHHHHTTCCEEEE----EGGGTCCC-------C-------SCGGGSSEEEECCCSSCTTS
T ss_pred CeEEEE-ECCCC-CCHHHHHHHHHHCCCeEEEE----eccCCCcC-------c-------CccccCCEEEECCCCCcccc
Confidence 468888 33222 24568899999999987551 22211100 0 246789999999998763
Q ss_pred ---chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecce
Q 008476 376 ---GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSR 452 (564)
Q Consensus 376 ---~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~ 452 (564)
.....++.++.+.+.++|+||||+|||+|+.++|++|...+ .+++|| +
T Consensus 64 ~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~lGG~V~~~~-----------------------~~e~G~------~ 114 (250)
T 3m3p_A 64 DLPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKAMGGEVTDSP-----------------------HAEIGW------V 114 (250)
T ss_dssp CCTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEE-----------------------EEEEEE------E
T ss_pred cchHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCEEEeCC-----------------------CCceee------E
Confidence 23556788898889999999999999999999999985421 133444 4
Q ss_pred eeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcC
Q 008476 453 RTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 530 (564)
Q Consensus 453 ~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss 530 (564)
++.+.+. +....+++-...+..+|.|+|.+. + +.++.++|.++++ .+++++++++ ++|+|||||+++
T Consensus 115 ~v~~~~~-~~~~~l~g~~~~~~v~~~H~~~v~------l-p~~~~vlA~s~~~-~~~a~~~~~~--~~GvQfHPE~~~ 181 (250)
T 3m3p_A 115 RAWPQHV-PQALEWLGTWDELELFEWHYQTFS------I-PPGAVHILRSEHC-ANQAYVLDDL--HIGFQCHIEMQA 181 (250)
T ss_dssp EEEECSS-HHHHHHHSCSSCEEEEEEEEEEEC------C-CTTEEEEEEETTE-EEEEEEETTT--EEEESSCTTCCH
T ss_pred EEEEecC-CCCcccccCCCccEEEEEccceee------c-CCCCEEEEEeCCC-CEEEEEECCe--eEEEEeCCcCCH
Confidence 5655543 222233321234557788988872 2 5789999999886 4999999884 679999999964
No 29
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.83 E-value=4.5e-21 Score=188.09 Aligned_cols=186 Identities=15% Similarity=0.182 Sum_probs=118.4
Q ss_pred CceEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCC
Q 008476 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (564)
Q Consensus 296 ~~~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r 375 (564)
.+++|+|+ ++ .++|.+++++|+.+|+.+.+ ++.. +.+.++||||||||++..
T Consensus 22 ~~~~I~il-~~---~~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~Dglil~GG~~~~ 73 (219)
T 1q7r_A 22 SNMKIGVL-GL---QGAVREHVRAIEACGAEAVI------VKKS------------------EQLEGLDGLVLPGGESTT 73 (219)
T ss_dssp CCCEEEEE-SC---GGGCHHHHHHHHHTTCEEEE------ECSG------------------GGGTTCSEEEECCCCHHH
T ss_pred CCCEEEEE-eC---CCCcHHHHHHHHHCCCEEEE------ECCH------------------HHHhhCCEEEECCCChHH
Confidence 45899999 54 34788888999999987543 3321 236789999999998643
Q ss_pred c-----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeec
Q 008476 376 G-----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLG 450 (564)
Q Consensus 376 ~-----~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG 450 (564)
. .....+.++.+.++++|+||||+|||+|+.++|+++.. +... + +..... ...|. +.+
T Consensus 74 ~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~~gg~~~~--~lg~--~------~~~~~~-----~~~g~--~~~ 136 (219)
T 1q7r_A 74 MRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKRIVGYDEP--HLGL--M------DITVER-----NSFGR--QRE 136 (219)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEEEESSCCC--CCCC--E------EEEEEC-----HHHHC--CCC
T ss_pred HHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHHhCCCCcC--CcCc--c------ceEEEe-----cCCCc--ccc
Confidence 2 12346788899899999999999999999998876521 1000 0 000000 00111 011
Q ss_pred ceeeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcC
Q 008476 451 SRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 530 (564)
Q Consensus 451 ~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss 530 (564)
.+... ..+.. ++ ..+...+.|++.+. .+ +.++.++|.+ |+ .+|+++.. +++|+|||||+++
T Consensus 137 ~~~~~-----~~~~g-~g--~~~~~~~~h~~~v~-----~l-~~~~~v~a~s-dg-~~ea~~~~---~i~GvQfHPE~~~ 197 (219)
T 1q7r_A 137 SFEAE-----LSIKG-VG--DGFVGVFIRAPHIV-----EA-GDGVDVLATY-ND-RIVAARQG---QFLGCSFHPELTD 197 (219)
T ss_dssp CEEEE-----EEETT-TE--EEEEEEESSCCEEE-----EE-CTTCEEEEEE-TT-EEEEEEET---TEEEESSCGGGSS
T ss_pred ceecC-----cccCC-CC--CceEEEEEecceee-----cc-CCCcEEEEEc-CC-EEEEEEEC---CEEEEEECcccCC
Confidence 11110 11111 11 23334455666553 23 5688999988 65 58999983 5889999999985
Q ss_pred CCCCchHHHHHHHHHHhcc
Q 008476 531 RPGKPSPLFLGNISHLYFV 549 (564)
Q Consensus 531 ~p~~p~pLF~~Fv~aa~~~ 549 (564)
. ..+|++|++++.++
T Consensus 198 ~----~~l~~~fl~~~~~~ 212 (219)
T 1q7r_A 198 D----HRLMQYFLNMVKEA 212 (219)
T ss_dssp C----CHHHHHHHHHHHHH
T ss_pred C----HHHHHHHHHHHHHh
Confidence 4 38999999988653
No 30
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.82 E-value=2.3e-20 Score=179.28 Aligned_cols=186 Identities=14% Similarity=0.149 Sum_probs=115.9
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCch
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~~ 377 (564)
+||+|+ +| .++|.+++++|+.+|+++.+ ++.. +.+.++|||++|||++....
T Consensus 2 m~I~il-~~---~~~~~~~~~~l~~~g~~~~~------~~~~------------------~~l~~~d~iil~GG~~~~~~ 53 (196)
T 2nv0_A 2 LTIGVL-GL---QGAVREHIHAIEACGAAGLV------VKRP------------------EQLNEVDGLILPGGESTTMR 53 (196)
T ss_dssp CEEEEE-CS---SSCCHHHHHHHHHTTCEEEE------ECSG------------------GGGGGCSEEEECCSCHHHHH
T ss_pred cEEEEE-Ec---cCCcHHHHHHHHHCCCEEEE------eCCh------------------HHHhhCCEEEECCCChhhHH
Confidence 589999 55 35888889999999986533 3321 23567899999999865321
Q ss_pred -----hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecce
Q 008476 378 -----QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSR 452 (564)
Q Consensus 378 -----eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~ 452 (564)
.+..+.++.+.++++|+||||+|||+|+.++|+++.. + ... .|....+ ...|. +
T Consensus 54 ~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~~gg~~~~--~-----lg~---~~~~~~~-----~~~g~------~ 112 (196)
T 2nv0_A 54 RLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNP--H-----LGL---LNVVVER-----NSFGR------Q 112 (196)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBCCC----C--C-----CCC---SCEEEEC-----CCSCT------T
T ss_pred HHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHHhcCCCCC--c-----ccC---CceeEec-----cCCCc------c
Confidence 2336788888899999999999999999988876421 1 100 0000000 00111 0
Q ss_pred eeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCC
Q 008476 453 RTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRP 532 (564)
Q Consensus 453 ~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p 532 (564)
...+..+ +.+.. ++. ++...+.|++.+. .+ +.++.++|.+ |+ .+|+++.. +++|+|||||+++.
T Consensus 113 ~~~~~~~-~~~~~-~g~--~~~~~~~h~~~v~-----~~-~~~~~v~a~~-d~-~~~a~~~~---~~~gvQfHPE~~~~- 176 (196)
T 2nv0_A 113 VDSFEAD-LTIKG-LDE--PFTGVFIRAPHIL-----EA-GENVEVLSEH-NG-RIVAAKQG---QFLGCSFHPELTED- 176 (196)
T ss_dssp TSEEEEE-ECCTT-CSS--CEEEEEESCCEEE-----EE-CTTCEEEEEE-TT-EEEEEEET---TEEEESSCTTSSSC-
T ss_pred cccccCC-ccccc-CCC--ceEEEEEecceec-----cc-CCCcEEEEEE-CC-EEEEEEEC---CEEEEEECCccCCc-
Confidence 0001111 22333 232 2334445666553 22 4678889987 55 48999873 47899999999765
Q ss_pred CCchHHHHHHHHHHhccCC
Q 008476 533 GKPSPLFLGNISHLYFVCV 551 (564)
Q Consensus 533 ~~p~pLF~~Fv~aa~~~~~ 551 (564)
..+|++|+++++++.+
T Consensus 177 ---~~l~~~fl~~~~~~~~ 192 (196)
T 2nv0_A 177 ---HRVTQLFVEMVEEYKQ 192 (196)
T ss_dssp ---CHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHhhhh
Confidence 3899999999876543
No 31
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.82 E-value=1.9e-20 Score=180.76 Aligned_cols=184 Identities=24% Similarity=0.287 Sum_probs=115.0
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCch
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~~ 377 (564)
++|+|+ +|+. .++.|+.++|+.+|+++.+ ++.. +.+.++|||++|| +|++..
T Consensus 3 ~~I~ii-d~~~--~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~d~lil~G-~g~~~~ 54 (200)
T 1ka9_H 3 MKALLI-DYGS--GNLRSAAKALEAAGFSVAV------AQDP------------------KAHEEADLLVLPG-QGHFGQ 54 (200)
T ss_dssp CEEEEE-CSSC--SCHHHHHHHHHHTTCEEEE------ESST------------------TSCSSCSEEEECC-CSCHHH
T ss_pred cEEEEE-eCCC--ccHHHHHHHHHHCCCeEEE------ecCh------------------HHcccCCEEEECC-CCcHHH
Confidence 589999 7753 2688999999999987654 3221 2356899999977 354321
Q ss_pred -------hHHHHHHHHHHHcCCCEEEEehhHHHHHHH---hccccccccCCcccccCCCCCCCeeeecCCCcccccCCce
Q 008476 378 -------QGKILAAKYAREHRIPYLGICLGMQVAVIE---FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTM 447 (564)
Q Consensus 378 -------eg~i~~ir~a~e~~iPiLGICLGmQll~ia---~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~Ggtm 447 (564)
....+.++.+.++++|+||||+|||+|+.+ +|+ . ++.. .+ +..+. .++..+.+++|
T Consensus 55 ~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~~~~Gg-~---~~l~--~~----~g~v~-~~~~~~~~~~G--- 120 (200)
T 1ka9_H 55 VMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEGSEEAPG-V---RGLG--LV----PGEVR-RFRAGRVPQMG--- 120 (200)
T ss_dssp HHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSEETTSTT-C---CCCC--SS----SSEEE-ECCSSSSSEEE---
T ss_pred HHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHhccccCC-c---CCcc--cc----ccEEE-ECCCCCCCcee---
Confidence 236788999889999999999999999887 453 1 1110 00 11111 11100123444
Q ss_pred eecceeeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCC-CCeEEEEEeCCCCcEEEEcccC
Q 008476 448 RLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET-SQRMEIVELPNHPYFIGVQFHP 526 (564)
Q Consensus 448 rlG~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~d-g~~vE~ie~~~~pffiGvQFHP 526 (564)
.+++.+.+ + +..+.+ ....+.|+|.+ +. ..+ .+ |.+++ |..++++...+ +++|+||||
T Consensus 121 ---~~~v~~~~--~-l~~~~~----~~~~~~Hs~~~-~~------~~~-~v-a~s~~~g~~~~~~~~~~--~i~gvQfHP 179 (200)
T 1ka9_H 121 ---WNALEFGG--A-FAPLTG----RHFYFANSYYG-PL------TPY-SL-GKGEYEGTPFTALLAKE--NLLAPQFHP 179 (200)
T ss_dssp ---EEECEECG--G-GGGGTT----CEEEEEESEEC-CC------CTT-CC-EEEEETTEEEEEEEECS--SEEEESSCT
T ss_pred ---EEEEEech--h-hhcCCC----CCEEEeccccc-CC------CCC-cE-EEEEeCCeEEEEEEeeC--CEEEEecCC
Confidence 34555544 3 555542 23567899988 42 122 35 76666 53356666655 478999999
Q ss_pred CCcCCCCCchHHH---HHHHHHH
Q 008476 527 EYKSRPGKPSPLF---LGNISHL 546 (564)
Q Consensus 527 E~ss~p~~p~pLF---~~Fv~aa 546 (564)
|++. .....|| ++|++.+
T Consensus 180 E~~~--~~g~~l~~~~~~F~~~~ 200 (200)
T 1ka9_H 180 EKSG--KAGLAFLALARRYFEVL 200 (200)
T ss_dssp TSSH--HHHHHHHHHHHHHC---
T ss_pred CcCc--cchhHHHHHHHHHHhhC
Confidence 9985 2346899 9998753
No 32
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.82 E-value=2e-20 Score=211.82 Aligned_cols=179 Identities=16% Similarity=0.159 Sum_probs=117.6
Q ss_pred eEEEEEeccCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEeCCCCCC
Q 008476 298 VRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 374 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~-SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIllpGGfG~ 374 (564)
.+|+|+ ||+. .|. .+.++|+.+|+.+.+ ++.+.. . +.+ .++|||||||||++
T Consensus 30 ~~I~VL-Dfg~---q~~~liar~lre~Gv~~~i------vp~~~~-~--------------e~i~~~~~dGIILsGGp~s 84 (697)
T 2vxo_A 30 GAVVIL-DAGA---QYGKVIDRRVRELFVQSEI------FPLETP-A--------------FAIKEQGFRAIIISGGPNS 84 (697)
T ss_dssp CCEEEE-EEC-----CHHHHHHHHHHTTCCEEE------EETTCC-H--------------HHHHHHTCSEEEEEECC--
T ss_pred CEEEEE-ECCC---chHHHHHHHHHHCCCEEEE------EECCCC-H--------------HHHhhcCCCEEEECCCCCc
Confidence 579999 6763 343 578999999988754 222110 0 112 58999999999987
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCceeecceee
Q 008476 375 RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRT 454 (564)
Q Consensus 375 r~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~GgtmrlG~~~v 454 (564)
...++.....+.+.+.++|+||||+|||+|+.++|+++..++ ..+.| .+++
T Consensus 85 ~~~~~~~~~~~~i~~~g~PvLGIC~G~QlLa~~lGG~v~~~~-----------------------~~e~G------~~~v 135 (697)
T 2vxo_A 85 VYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKS-----------------------VREDG------VFNI 135 (697)
T ss_dssp -----CCCCCGGGTTSSCCEEEEEHHHHHHHHHTTCCBCC------------------------------------CEEE
T ss_pred ccCccchhHHHHHHhCCCCEEEECHHHHHHHHHhCCeEeecC-----------------------CCccc------eEEE
Confidence 532211111233456789999999999999999999985421 12233 4566
Q ss_pred EeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCC
Q 008476 455 YFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGK 534 (564)
Q Consensus 455 ~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~~ 534 (564)
.+.+++.++..+ +... ..++.|+|.|. .+ +.|++++|.++ + .+++++++++| ++|+|||||...+|.
T Consensus 136 ~~~~~~~Lf~~l-~~~~--~v~~~H~~~V~-----~l-p~g~~vlA~s~-~-~i~ai~~~~~~-i~GvQFHPE~~~t~~- 202 (697)
T 2vxo_A 136 SVDNTCSLFRGL-QKEE--VVLLTHGDSVD-----KV-ADGFKVVARSG-N-IVAGIANESKK-LYGAQFHPEVGLTEN- 202 (697)
T ss_dssp EECTTSGGGTTC-CSEE--EECCCSSCCBS-----SC-CTTCEEEEEET-T-EEEEEEETTTT-EEEESSCTTSSSSTT-
T ss_pred EecCCChhhhcC-CccC--cceeeccccee-----cC-CCCeEEEEEeC-C-ceEEEEeCCCC-EEEEEecccCCCCcc-
Confidence 665553333333 2222 34667888774 23 57899999984 4 69999999988 569999999998886
Q ss_pred chHHHHHHH
Q 008476 535 PSPLFLGNI 543 (564)
Q Consensus 535 p~pLF~~Fv 543 (564)
...+|++|+
T Consensus 203 g~~ll~nFl 211 (697)
T 2vxo_A 203 GKVILKNFL 211 (697)
T ss_dssp HHHHHHHHH
T ss_pred chhhhhhhh
Confidence 689999999
No 33
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.81 E-value=3.8e-20 Score=180.04 Aligned_cols=186 Identities=12% Similarity=0.126 Sum_probs=111.3
Q ss_pred CCCceEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCC
Q 008476 294 LHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 373 (564)
Q Consensus 294 ~~~~~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG 373 (564)
+..+++|+|+ +| ..+|.++.++|+.+|+++.+ ++.. +.+.++|||+||||+.
T Consensus 17 ~~~~~~I~ii-~~---~~~~~~~~~~l~~~g~~~~~------~~~~------------------~~l~~~d~iil~GG~~ 68 (208)
T 2iss_D 17 RGSHMKIGVL-GV---QGDVREHVEALHKLGVETLI------VKLP------------------EQLDMVDGLILPGGES 68 (208)
T ss_dssp ---CCEEEEE-CS---SSCHHHHHHHHHHTTCEEEE------ECSG------------------GGGGGCSEEEECSSCH
T ss_pred CCCCcEEEEE-EC---CCchHHHHHHHHHCCCEEEE------eCCh------------------HHHhhCCEEEECCCcH
Confidence 3456899999 67 23899999999999976533 3321 2356899999999853
Q ss_pred CCch-----hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCCcee
Q 008476 374 NRGV-----QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMR 448 (564)
Q Consensus 374 ~r~~-----eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~Ggtmr 448 (564)
.... .+..+.++.+.++++|+||||+|||+|+.++|+... +...- + |....+ ...|..
T Consensus 69 ~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~~gg~~~--~~lg~--~------~~~v~~-----~~~g~~-- 131 (208)
T 2iss_D 69 TTMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKRIKNYSQ--EKLGV--L------DITVER-----NAYGRQ-- 131 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEEEC---C--CCCCC--E------EEEEET-----TTTCSG--
T ss_pred HHHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHHcCCCCC--CCccc--c------ceEEEe-----cCCCcc--
Confidence 2111 124677888888999999999999999988887431 11100 0 000000 001110
Q ss_pred ecceeeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCC
Q 008476 449 LGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEY 528 (564)
Q Consensus 449 lG~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ 528 (564)
...+..+ +.+..+ +. .++...+.|++.+. .+ +.++.++|.+ |+ .+|+++.. + ++|+|||||+
T Consensus 132 ----~~~~~~~-~~~~~~-~~-~~~~~~~~h~~~v~-----~~-~~~~~v~a~~-d~-~~~a~~~~--~-i~GvQfHPE~ 193 (208)
T 2iss_D 132 ----VESFETF-VEIPAV-GK-DPFRAIFIRAPRIV-----ET-GKNVEILATY-DY-DPVLVKEG--N-ILACTFHPEL 193 (208)
T ss_dssp ----GGCEEEE-ECCGGG-CS-SCEEEEESSCCEEE-----EE-CSSCEEEEEE-TT-EEEEEEET--T-EEEESSCGGG
T ss_pred ----cccccCC-cccccC-CC-CceEEEEEeCcccc-----cC-CCCcEEEEEE-CC-EEEEEEEC--C-EEEEEeCCCc
Confidence 0001111 223332 11 12333344554443 22 4578888887 54 59999874 3 7899999999
Q ss_pred cCCCCCchHHHHHHHHHH
Q 008476 529 KSRPGKPSPLFLGNISHL 546 (564)
Q Consensus 529 ss~p~~p~pLF~~Fv~aa 546 (564)
+..+ .+|++|+++|
T Consensus 194 ~~~~----~l~~~fl~~~ 207 (208)
T 2iss_D 194 TDDL----RLHRYFLEMV 207 (208)
T ss_dssp SSCC----HHHHHHHTTC
T ss_pred CCcH----HHHHHHHHHh
Confidence 8653 8999999764
No 34
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.74 E-value=3.6e-18 Score=167.88 Aligned_cols=197 Identities=13% Similarity=0.148 Sum_probs=112.2
Q ss_pred ceEEEEEeccCCCcchHHHHHHHHHHc---CCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCC
Q 008476 297 PVRIAMVGKYTGLSDAYLSILKALLHA---SVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 373 (564)
Q Consensus 297 ~~~IavVGkY~~~~Day~SIi~aL~~a---G~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG 373 (564)
+++|||+ +|. .++.+.+++|+.+ |+.+.. ++.. +.+.++||||||||+.
T Consensus 3 ~~~I~Il-~~~---~~~~~~~~~l~~~~~~G~~~~~------~~~~------------------~~l~~~dglil~GG~~ 54 (227)
T 2abw_A 3 EITIGVL-SLQ---GDFEPHINHFIKLQIPSLNIIQ------VRNV------------------HDLGLCDGLVIPGGES 54 (227)
T ss_dssp CEEEEEE-CTT---SCCHHHHHHHHTTCCTTEEEEE------ECSH------------------HHHHTCSEEEECCSCH
T ss_pred CcEEEEE-eCC---CCcHHHHHHHHHhccCCeEEEE------EcCc------------------cccccCCEEEECCCcH
Confidence 4789999 554 3677889999998 865422 3221 3456799999999974
Q ss_pred CC--c---h--hHHHHHHHHHHHc-CCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcccccCC
Q 008476 374 NR--G---V--QGKILAAKYAREH-RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGG 445 (564)
Q Consensus 374 ~r--~---~--eg~i~~ir~a~e~-~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~Gg 445 (564)
+. . . .+..+.++.+.+. ++|+||||+|||+|+.++|+.+..-.-....++.- .++...+ ...|.
T Consensus 55 ~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~~gg~~~~~~~~~~~~lG~---~~~~~~~-----~~~g~ 126 (227)
T 2abw_A 55 TTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGG---LDITICR-----NFYGS 126 (227)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEEEECCCSCCTTGGGSCCCC---EEEEEEC-----CC---
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHHhcCCccccccccccccCc---eeEEEEe-----cCCCc
Confidence 31 1 1 2457788888899 99999999999999988887541100000011100 0000000 00010
Q ss_pred c-eeecceeeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeC-----CCCeEEEEEeCCCCcE
Q 008476 446 T-MRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDE-----TSQRMEIVELPNHPYF 519 (564)
Q Consensus 446 t-mrlG~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~-----dg~~vE~ie~~~~pff 519 (564)
. .++ ...+.+ ++ ...+.+ . .+..+..|++.+. .+.+.++.++|.+. ++ .+++++.. ++
T Consensus 127 ~~~~~-~~~~~~-~~---~~~~~g-~-~~~~~~~h~~~v~-----~~~~~~~~vla~~~~~~~g~~-~~~a~~~~---~v 190 (227)
T 2abw_A 127 QNDSF-ICSLNI-IS---DSSAFK-K-DLTAACIRAPYIR-----EILSDEVKVLATFSHESYGPN-IIAAVEQN---NC 190 (227)
T ss_dssp -CCEE-EEECEE-CC---CCTTCC-T-TCEEEEESCCEEE-----EECCTTCEEEEEEEETTTEEE-EEEEEEET---TE
T ss_pred ccccc-cccccc-cc---ccccCC-C-ceeEEEEEcceEe-----ecCCCCcEEEEEcccccCCCC-ceEEEEEC---CE
Confidence 0 000 001111 11 000011 1 1122333455442 11135788888875 34 48888863 47
Q ss_pred EEEcccCCCcCCCCCchHHHHHHHHHHhcc
Q 008476 520 IGVQFHPEYKSRPGKPSPLFLGNISHLYFV 549 (564)
Q Consensus 520 iGvQFHPE~ss~p~~p~pLF~~Fv~aa~~~ 549 (564)
+|+|||||++..+ .+|++|+++|++.
T Consensus 191 ~gvQfHPE~~~~~----~l~~~Fl~~~~~~ 216 (227)
T 2abw_A 191 LGTVFHPELLPHT----AFQQYFYEKVKNY 216 (227)
T ss_dssp EEESSCGGGSSCC----HHHHHHHHHHHHH
T ss_pred EEEEECCeeCCCc----HHHHHHHHHHHhh
Confidence 8999999998653 8999999998654
No 35
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.67 E-value=2.2e-17 Score=183.01 Aligned_cols=197 Identities=16% Similarity=0.143 Sum_probs=116.5
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCch
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~~ 377 (564)
++|+|+ +|+.. .+.++.++|+.+|+.+.+ ++..+. ..+.++|||||||| |++..
T Consensus 5 ~~I~Ii-d~~~g--~~~~~~~~l~~~G~~~~v------v~~~~~----------------~~l~~~DglILpGg-G~~~~ 58 (555)
T 1jvn_A 5 PVVHVI-DVESG--NLQSLTNAIEHLGYEVQL------VKSPKD----------------FNISGTSRLILPGV-GNYGH 58 (555)
T ss_dssp CEEEEE-CCSCS--CCHHHHHHHHHTTCEEEE------ESSGGG----------------CCSTTCSCEEEEEC-SCHHH
T ss_pred CEEEEE-ECCCC--CHHHHHHHHHHCCCEEEE------ECCccc----------------cccccCCEEEECCC-CchHh
Confidence 589999 78632 567999999999987644 332110 13678999999884 44321
Q ss_pred -------hHHHHHHHHHHHcCCCEEEEehhHHHHHHHh--ccccccc--cCCcccccCCCCCCCeeeecCCCcccccCCc
Q 008476 378 -------QGKILAAKYAREHRIPYLGICLGMQVAVIEF--ARSVLNL--RDANSTEFDPNTKNPCVIFMPEGSKTHMGGT 446 (564)
Q Consensus 378 -------eg~i~~ir~a~e~~iPiLGICLGmQll~ia~--g~~vlgl--~dA~s~Ef~~~~~~~vi~~m~e~~~~~~Ggt 446 (564)
.+..++++.+.++++|+||||+|||+|+.++ |+..-+| -++....+... ....+|+||
T Consensus 59 ~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a~~egg~~~~Lg~lgg~v~~~~~~----------~~~~~~~G~- 127 (555)
T 1jvn_A 59 FVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAGSVESPKSTGLNYIDFKLSRFDDS----------EKPVPEIGW- 127 (555)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEEETTBTTCCCCCSEEEEEEECCTT----------TSCSSEEEE-
T ss_pred HhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhhhhcCCCccccCCCCcEEEECCcC----------CCCCccccc-
Confidence 2356788888889999999999999998876 1111111 11111111000 012345555
Q ss_pred eeecceeeEeecCCchhhhccCCceeEeeeeceeeeeChhhh-hhhccCCeEEEEEeCCC--CeEEEEEeCCCCcEEEEc
Q 008476 447 MRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMI-ARLENAGLSFTGKDETS--QRMEIVELPNHPYFIGVQ 523 (564)
Q Consensus 447 mrlG~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v-~~l~~~gl~~~a~s~dg--~~vE~ie~~~~pffiGvQ 523 (564)
+++.+. . .++..+. ... ..++.|+|.+..... ..+.+.++.++|.+..+ ..+++++. . +++|+|
T Consensus 128 -----~~v~~~-~-~L~~~l~-~~~--~~~~vHS~~~~~i~~~~~~L~~g~~vlA~s~~~~D~~i~ai~~--~-~i~GvQ 194 (555)
T 1jvn_A 128 -----NSCIPS-E-NLFFGLD-PYK--RYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNK--N-NIFATQ 194 (555)
T ss_dssp -----ECCCCC-T-TCCTTCC-TTS--CEEEEESEECBCCHHHHHHHHHTTCEEEEEEETTEEEEEEEEE--T-TEEEES
T ss_pred -----eEEEEc-C-HHHhhCC-CCc--eEEEEEEEEEEecccccccCCCCCEEEEEEcCCCCCeEEEEEe--C-CEEEEE
Confidence 333332 2 4444442 111 234668887753211 00102456677776633 35899984 3 478999
Q ss_pred ccCCCcCCCCCchHHHHHHHHHH
Q 008476 524 FHPEYKSRPGKPSPLFLGNISHL 546 (564)
Q Consensus 524 FHPE~ss~p~~p~pLF~~Fv~aa 546 (564)
||||+++ .....+|++|+++.
T Consensus 195 FHPE~s~--~~g~~l~~~Fl~~~ 215 (555)
T 1jvn_A 195 FHPEKSG--KAGLNVIENFLKQQ 215 (555)
T ss_dssp SBGGGSH--HHHHHHHHHHHTTC
T ss_pred eCcEecC--hhHHHHHHHHHhcc
Confidence 9999863 12367999999864
No 36
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=99.50 E-value=2.7e-13 Score=139.39 Aligned_cols=197 Identities=14% Similarity=0.138 Sum_probs=112.3
Q ss_pred CceEEEEEeccCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHH-hccCCCEEEeCCCCC
Q 008476 296 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWK-LLKGADGILVPGGFG 373 (564)
Q Consensus 296 ~~~~IavVGkY~~~~Day~-SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~-~L~~~DGIllpGGfG 373 (564)
+.+||||+ .-...+..|. .+.+.|......+.+ ....+.+.+......+.-...|....+ ...++||+||+|||-
T Consensus 34 rplkI~IL-nlmp~k~~te~qf~rlL~~~~~qv~v--~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGap~ 110 (301)
T 2vdj_A 34 RALKIAIL-NLMPTKQETEAQLLRLIGNTPLQLDV--HLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIITGAPV 110 (301)
T ss_dssp CCEEEEEE-CCCSSHHHHHHHHHHHHTCSSSCEEE--EEECCCC------------CCEECHHHHTTSCEEEEEECCCTT
T ss_pred CCceEEEE-eCCCCcCchHHHHHHHhcCCCCcEEE--EEEeccCCCCCCccHHHHhhcccCcccccccccCEEEECCCCC
Confidence 45899999 5443332333 445555444444332 232232212111000000112323323 247899999999984
Q ss_pred C-------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcc-ccccccCCcccccCCCCCCCeeeecCCCcccccCC
Q 008476 374 N-------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFAR-SVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGG 445 (564)
Q Consensus 374 ~-------r~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~-~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~Gg 445 (564)
. +-+....+.+++++++++|+||||+|+|+++.++++ ....+. .
T Consensus 111 ~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~G~~k~~~~-------------------------~--- 162 (301)
T 2vdj_A 111 ETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPLK-------------------------E--- 162 (301)
T ss_dssp TTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEE-------------------------E---
T ss_pred cCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhCCCccccCC-------------------------C---
Confidence 3 224667888999999999999999999996666655 221110 0
Q ss_pred ceeecceeeEeec-CCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcc
Q 008476 446 TMRLGSRRTYFQI-KDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQF 524 (564)
Q Consensus 446 tmrlG~~~v~l~~-~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQF 524 (564)
...|-.+..+.. .+.++..+ + ..+..-|.|.-++..+.+..+ .|++++|.|+... +.++..++.. ++++||
T Consensus 163 -K~~Gv~~~~~~~~~~pL~~g~-~--~~f~~phsr~~~~~~~~v~~~--pga~vLA~S~~~~-~~~~~~~~~~-~~~vQg 234 (301)
T 2vdj_A 163 -KMFGVFEHEVREQHVKLLQGF-D--ELFFAVHSRHTEVRESDIREV--KELTLLANSEEAG-VHLVIGQEGR-QVFALG 234 (301)
T ss_dssp -EEEEEEEEEECCSSCGGGTTC-C--SEEEEEEEEEEECCHHHHHTC--TTEEEEEEETTTE-EEEEEEGGGT-EEEECS
T ss_pred -CEEEEEEEEecCCCCccccCC-C--CceEeeeEeccCcCHHHccCC--CCCEEEEeCCCCc-ceEEEecCCC-EEEEEC
Confidence 112333433332 22333332 1 233345544445666666655 4999999987665 9999997765 679999
Q ss_pred cCCCcCC
Q 008476 525 HPEYKSR 531 (564)
Q Consensus 525 HPE~ss~ 531 (564)
|||+...
T Consensus 235 HpEyd~~ 241 (301)
T 2vdj_A 235 HSEYSCD 241 (301)
T ss_dssp CTTCCTT
T ss_pred CCCCCHH
Confidence 9999765
No 37
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=99.49 E-value=3.6e-13 Score=138.97 Aligned_cols=197 Identities=14% Similarity=0.134 Sum_probs=113.2
Q ss_pred CceEEEEEeccCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHH-hccCCCEEEeCCCCC
Q 008476 296 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWK-LLKGADGILVPGGFG 373 (564)
Q Consensus 296 ~~~~IavVGkY~~~~Day~-SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~-~L~~~DGIllpGGfG 373 (564)
+.+||||+ .-...+..|. .+.+.|...+..+.+ ....+.+.+......+.-...|....+ ...++||+||+|||-
T Consensus 46 rplkI~IL-nlmp~k~~te~qf~rlL~~~~~qv~v--~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGsP~ 122 (312)
T 2h2w_A 46 RPLEILIL-NLMPDKIKTEIQLLRLLGNTPLQVNV--TLLYTETHKPKHTPIEHILKFYTTFSAVKDRKFDGFIITGAPV 122 (312)
T ss_dssp CCEEEEEE-CCCSSHHHHHHHHHHHHHSSSSCEEE--EEECCSCCCCCSSCHHHHHHHCBCGGGTTTCCEEEEEECCCSC
T ss_pred CCceEEEE-eCCCCcCchHHHHHHHhcCCCCcEEE--EEEEccCCCCCCccHHHHhhccCCcccccccCcCEEEECCCCC
Confidence 46899999 5443332333 455666555554433 233332222111000000011222212 246899999999984
Q ss_pred C-------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccc-ccccCCcccccCCCCCCCeeeecCCCcccccCC
Q 008476 374 N-------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSV-LNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGG 445 (564)
Q Consensus 374 ~-------r~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g~~v-lgl~dA~s~Ef~~~~~~~vi~~m~e~~~~~~Gg 445 (564)
. +-+....+.+++++++++|+||||+|+|+++.++++-. ..+ +.
T Consensus 123 ~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~G~~k~~~-------------------------~~--- 174 (312)
T 2h2w_A 123 ELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYGIPKYEL-------------------------PQ--- 174 (312)
T ss_dssp TTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEE-------------------------EE---
T ss_pred CCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhCCCccccC-------------------------CC---
Confidence 3 22466788899999999999999999999766666522 110 00
Q ss_pred ceeecceeeEeecCCchhhhccCCceeEeeeeceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEccc
Q 008476 446 TMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFH 525 (564)
Q Consensus 446 tmrlG~~~v~l~~~~s~~~~iyg~~~~I~erh~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFH 525 (564)
...|..+..+.+.+.++..+ + ..+..-|.|.-++..+.+... .|++++|.|+... +.++..++.. ++++|||
T Consensus 175 -K~~Gv~~~~~~~~~pL~~g~-~--~~f~vphsr~~e~~~~~v~~~--pga~vLA~S~~~~-~q~~~~~~~~-~~~vQgH 246 (312)
T 2h2w_A 175 -KLSGVYKHRVAKDSVLFRGH-D--DFFWAPHSRYTEVKKEDIDKV--PELEILAESDEAG-VYVVANKSER-QIFVTGH 246 (312)
T ss_dssp -EEEEEEEEEESSCCGGGTTC-C--SEEEEEEEEEEECCHHHHTTC--C-CEEEEEETTTE-EEEEECSSSS-EEEECSC
T ss_pred -CEEEEEEEEEcCCCccccCC-C--CceEeeEEeccccCHHHccCC--CCCEEEEcCCCCc-ceEEEecCCC-EEEEECC
Confidence 11234444444432344332 2 223344543345555555543 5899999987665 9999997765 6799999
Q ss_pred CCCcCC
Q 008476 526 PEYKSR 531 (564)
Q Consensus 526 PE~ss~ 531 (564)
||+...
T Consensus 247 PEyd~~ 252 (312)
T 2h2w_A 247 PEYDRY 252 (312)
T ss_dssp TTCCTT
T ss_pred CCCCHH
Confidence 999765
No 38
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=99.05 E-value=7e-10 Score=132.63 Aligned_cols=195 Identities=19% Similarity=0.234 Sum_probs=112.7
Q ss_pred CceEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCC--
Q 008476 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG-- 373 (564)
Q Consensus 296 ~~~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG-- 373 (564)
.++||+|+ +|... ..-.++.+||+++|+.+.+ .|+. ++.... +.++++|+|++||||.
T Consensus 1046 ~~pkVaIi-~~~G~-N~~~~~~~A~~~aG~~~~~----v~~~--dl~~~~------------~~l~~~d~lvlPGGfSyg 1105 (1303)
T 3ugj_A 1046 ARPKVAVL-REQGV-NSHVEMAAAFHRAGFDAID----VHMS--DLLGGR------------IGLGNFHALVACGGFSYG 1105 (1303)
T ss_dssp CCCEEEEE-ECTTC-CCHHHHHHHHHHTTCEEEE----EEHH--HHHTTS------------CCGGGCSEEEECCSCGGG
T ss_pred CCCEEEEE-ecCCc-CCHHHHHHHHHHhCCceEE----Eeec--ccccCc------------ccHhhCCEEEECCCCcch
Confidence 35799999 77433 2567999999999998743 2332 111000 3478899999999963
Q ss_pred CC---c--h-------hHHHHHHHHH-HHcCCCEEEEehhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCcc
Q 008476 374 NR---G--V-------QGKILAAKYA-REHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSK 440 (564)
Q Consensus 374 ~r---~--~-------eg~i~~ir~a-~e~~iPiLGICLGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~~ 440 (564)
+. + + ..+.++++.+ .+.++|+||||+|||+|+ +.. .+ ++.+.. .| .++..
T Consensus 1106 D~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~-e~~-gl--lPg~~~--------~p--~l~~N--- 1168 (1303)
T 3ugj_A 1106 DVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMS-NLR-EL--IPGSEL--------WP--RFVRN--- 1168 (1303)
T ss_dssp GTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHH-TTG-GG--STTCTT--------CC--EEECC---
T ss_pred hhhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHH-Hhc-Cc--CCCCCC--------CC--eEecC---
Confidence 31 1 0 2344556654 357899999999999995 331 12 122210 01 11111
Q ss_pred cccCCceeecce--eeEeecCCc-hhhhccCCceeEeeeece-eeeeC-hhhhhhhccCCeEEEEE-------------e
Q 008476 441 THMGGTMRLGSR--RTYFQIKDC-KSAKLYGNRTFIDERHRH-RYEVN-PDMIARLENAGLSFTGK-------------D 502 (564)
Q Consensus 441 ~~~GgtmrlG~~--~v~l~~~~s-~~~~iyg~~~~I~erh~H-rYeVn-~~~v~~l~~~gl~~~a~-------------s 502 (564)
..+ |+=.+ .+++....| +++.+-+..-.+...|.. ||.+. ++.+++|+..|....-+ |
T Consensus 1169 --~s~--~f~~r~~~~~v~~~~s~~~~~~~g~~~~i~vaHgEG~~~~~~~~~l~~l~~~~~v~~rY~d~~g~~~~~yp~N 1244 (1303)
T 3ugj_A 1169 --HSD--RFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPAN 1244 (1303)
T ss_dssp --TTS--SCEEEEEEEEECCCSCGGGTTCTTCEEEEEEEESSCEEECSSHHHHHHHHHTTCEEEEEBCTTSCBCCSTTTS
T ss_pred --CCC--CeEEeCeEEEECCCCChhhhccCCCEEeeeeEeCCCCeeeCCHHHHHHHHhCCcEEEEEeCCCCCcccCCCCC
Confidence 011 01011 122333223 344433322345567754 44453 45677777777665554 4
Q ss_pred CCCCe--EEEEEeCCCCcEEEEcccCCCcCCC
Q 008476 503 ETSQR--MEIVELPNHPYFIGVQFHPEYKSRP 532 (564)
Q Consensus 503 ~dg~~--vE~ie~~~~pffiGvQFHPE~ss~p 532 (564)
+||.. +++|-.++.+ ++|...|||....+
T Consensus 1245 PNGS~~~IaGi~s~~Gr-vlg~MpHPEr~~~~ 1275 (1303)
T 3ugj_A 1245 PNGSPNGITAVTTENGR-VTIMMPHPERVFRT 1275 (1303)
T ss_dssp SSCCGGGEEEEECTTSS-EEEESSBGGGSSBG
T ss_pred CCCChhhceEeECCCCC-EEEEcCChHHcccc
Confidence 56653 8999999987 56999999996653
No 39
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.45 E-value=1.4e-07 Score=91.75 Aligned_cols=92 Identities=15% Similarity=0.037 Sum_probs=64.2
Q ss_pred ceEEEEEeccCCC---cchH-HHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCC
Q 008476 297 PVRIAMVGKYTGL---SDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (564)
Q Consensus 297 ~~~IavVGkY~~~---~Day-~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGf 372 (564)
..+|++| .|... .|.| .|+.++|++.|+++.+ ++-.+- ++ ++..+.+.++|+|++|||-
T Consensus 27 ~~~i~~I-p~As~~~~~~~~~~s~~~a~~~lG~~v~~------~~i~~~-------~~---~~~~~~l~~ad~I~l~GG~ 89 (206)
T 3l4e_A 27 GKTVTFI-PTASTVEEVTFYVEAGKKALESLGLLVEE------LDIATE-------SL---GEITTKLRKNDFIYVTGGN 89 (206)
T ss_dssp TCEEEEE-CGGGGGCSCCHHHHHHHHHHHHTTCEEEE------CCTTTS-------CH---HHHHHHHHHSSEEEECCSC
T ss_pred CCEEEEE-CCCCCCCCHHHHHHHHHHHHHHcCCeEEE------EEecCC-------Ch---HHHHHHHHhCCEEEECCCC
Confidence 4799999 78643 2234 5999999999997543 321110 11 1223567899999999952
Q ss_pred CCCc-----hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008476 373 GNRG-----VQGKILAAKYAREHRIPYLGICLGMQVAV 405 (564)
Q Consensus 373 G~r~-----~eg~i~~ir~a~e~~iPiLGICLGmQll~ 405 (564)
-.+- -.+..++++.+.++++|++|||.|||+|+
T Consensus 90 ~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~ 127 (206)
T 3l4e_A 90 TFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITS 127 (206)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhc
Confidence 2121 14678889999889999999999999984
No 40
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=98.41 E-value=1.1e-07 Score=93.83 Aligned_cols=88 Identities=18% Similarity=0.241 Sum_probs=62.0
Q ss_pred ceEEEEEeccCC---CcchH-HHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCC
Q 008476 297 PVRIAMVGKYTG---LSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (564)
Q Consensus 297 ~~~IavVGkY~~---~~Day-~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGf 372 (564)
..+|++| +|.. -.|.| .|+.++|++.|+++.. +.. .+ +..+.+.++|+|++|||-
T Consensus 31 ~~~i~iI-~~a~~~~~~~~~~~~~~~al~~lG~~~~~------v~~--~~------------d~~~~l~~ad~I~lpGG~ 89 (229)
T 1fy2_A 31 RRSAVFI-PFAGVTQTWDEYTDKTAEVLAPLGVNVTG------IHR--VA------------DPLAAIEKAEIIIVGGGN 89 (229)
T ss_dssp CCEEEEE-CTTCCSSCHHHHHHHHHHHHGGGTCEEEE------TTS--SS------------CHHHHHHHCSEEEECCSC
T ss_pred CCeEEEE-ECCCCCCCHHHHHHHHHHHHHHCCCEEEE------Eec--cc------------cHHHHHhcCCEEEECCCc
Confidence 4799999 7863 12234 5899999999986533 221 00 012567889999999953
Q ss_pred CCCc---h--hHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008476 373 GNRG---V--QGKILAAKYAREHRIPYLGICLGMQVAV 405 (564)
Q Consensus 373 G~r~---~--eg~i~~ir~a~e~~iPiLGICLGmQll~ 405 (564)
-..- + .+..++++.+.++++|++|||.|||+|+
T Consensus 90 ~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~ 127 (229)
T 1fy2_A 90 TFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLAC 127 (229)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhc
Confidence 2221 1 3567788888888999999999999984
No 41
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=97.77 E-value=5.9e-05 Score=71.82 Aligned_cols=103 Identities=16% Similarity=0.155 Sum_probs=64.3
Q ss_pred CceEEEEEeccCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCCC-cccc----cccCCchhhhHHHH-hccCCCEEEe
Q 008476 296 EPVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD-LEDA----TEKENPDAYKAAWK-LLKGADGILV 368 (564)
Q Consensus 296 ~~~~IavVGkY~~~~D-ay~SIi~aL~~aG~~v~v~v~i~wi~s~~-le~~----~~~~~p~~y~~~~~-~L~~~DGIll 368 (564)
...||+++ -+....+ ...+..+.|+.+|+++.+. -.+... +... ....+. .+ .+ ...++|+|+|
T Consensus 22 ~~~kV~il-l~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~~v~~~~g~~~v~~~~-~l---~~~~~~~~D~liv 92 (193)
T 1oi4_A 22 LSKKIAVL-ITDEFEDSEFTSPADEFRKAGHEVITI----EKQAGKTVKGKKGEASVTIDK-SI---DEVTPAEFDALLL 92 (193)
T ss_dssp CCCEEEEE-CCTTBCTHHHHHHHHHHHHTTCEEEEE----ESSTTCEEECTTSSCEEECCE-EG---GGCCGGGCSEEEE
T ss_pred cCCEEEEE-ECCCCCHHHHHHHHHHHHHCCCEEEEE----ECCCCcceecCCCCeEEECCC-Ch---HHCCcccCCEEEE
Confidence 34689998 5654443 3568899999999776541 111111 1000 000000 01 01 1357899999
Q ss_pred CCCCCCCc---hhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008476 369 PGGFGNRG---VQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (564)
Q Consensus 369 pGGfG~r~---~eg~i~~ir~a~e~~iPiLGICLGmQll~ia 407 (564)
|||+|... ....++.++.+.++++|+.|||.|.|+|+-+
T Consensus 93 pGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~a 134 (193)
T 1oi4_A 93 PGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISA 134 (193)
T ss_dssp CCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHH
T ss_pred CCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHC
Confidence 99976422 2557788999989999999999999999743
No 42
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=97.43 E-value=0.00037 Score=64.29 Aligned_cols=100 Identities=15% Similarity=0.262 Sum_probs=62.8
Q ss_pred ceEEEEEeccCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCC--cccc-cccCCchhhhHHHHhc--cCCCEEEeCC
Q 008476 297 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACD--LEDA-TEKENPDAYKAAWKLL--KGADGILVPG 370 (564)
Q Consensus 297 ~~~IavVGkY~~~~Da-y~SIi~aL~~aG~~v~v~v~i~wi~s~~--le~~-~~~~~p~~y~~~~~~L--~~~DGIllpG 370 (564)
++||+++ =|....+. .....+.|+.+|+++.+ +..+. +... ...-.++ ...+.+ ..+|.|+|||
T Consensus 2 ~~ki~il-~~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~~~~v~~~~g~~i~~~---~~~~~~~~~~~D~livpG 71 (168)
T 3l18_A 2 SMKVLFL-SADGFEDLELIYPLHRIKEEGHEVYV------ASFQRGKITGKHGYSVNVD---LTFEEVDPDEFDALVLPG 71 (168)
T ss_dssp CCEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEE------EESSSEEEECTTSCEEEEC---EEGGGCCGGGCSEEEECC
T ss_pred CcEEEEE-eCCCccHHHHHHHHHHHHHCCCEEEE------EECCCCEEecCCCcEEecc---CChhHCCHhhCCEEEECC
Confidence 4688888 56544432 55788999999977654 22110 1000 0000000 001222 3689999999
Q ss_pred CCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 371 GFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 371 GfG~r---~~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
|+|.. ..+..++.++.+.++++|+.+||-|.++|+-
T Consensus 72 G~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~ 110 (168)
T 3l18_A 72 GKAPEIVRLNEKAVMITRRMFEDDKPVASICHGPQILIS 110 (168)
T ss_dssp BSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred CcCHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHHH
Confidence 98642 2356778899999999999999999999863
No 43
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=96.82 E-value=0.0035 Score=62.17 Aligned_cols=170 Identities=15% Similarity=0.159 Sum_probs=94.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCcc----cc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNY----ER 76 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~y----er 76 (564)
+|-||||| .=++.||=++++.|.+.|+.+|++|...| | .+.|-. ..+| .|-|...+ .|
T Consensus 21 ~k~i~Itg-T~t~vGKT~vs~gL~~~L~~~G~~V~~fK--P-----------v~~g~~--~~~~--~~~D~~~~~~~~~~ 82 (242)
T 3qxc_A 21 GHMLFISA-TNTNAGKTTCARLLAQYCNACGVKTILLK--P-----------IETGVN--DAIN--HSSDAHLFLQDNRL 82 (242)
T ss_dssp CEEEEEEE-SSTTSSHHHHHHHHHHHHHHTTCCEEEEC--C-----------EECSCC--TTTC--CCSHHHHHHHHHHT
T ss_pred CcEEEEEe-CCCCCcHHHHHHHHHHHHHhCCCceEEEe--e-----------eecCCc--ccCC--CCchHHHHHHHHHH
Confidence 47899986 56999999999999999999999999988 2 222210 0001 22233333 33
Q ss_pred cc-CCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc-
Q 008476 77 FM-DIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI- 154 (564)
Q Consensus 77 f~-~~~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdi- 154 (564)
+. ++....-+-++--.-..--+..++.|.+ +. ---++|++.+.+++ .++|++|||==|-+.+.
T Consensus 83 ~~~g~~~~~~~p~~~~~p~sp~~aa~~~g~~--~~-----i~~~~I~~~~~~l~--------~~~D~vlIEGagGl~~pl 147 (242)
T 3qxc_A 83 LDRSLTLKDISFYRYHKVSAPLIAQQEEDPN--AP-----IDTDNLTQRLHNFT--------KTYDLVIVEGAGGLCVPI 147 (242)
T ss_dssp TCTTCCHHHHCCEECSSSSCHHHHHHHHCTT--CC-----CCHHHHHHHHHHGG--------GTCSEEEEECCSCTTCBS
T ss_pred HhCCCChHHeeeEEECCCCChHHHHHHcCCC--Cc-----CCHHHHHHHHHHHH--------hcCCEEEEECCCCccccc
Confidence 33 2221000000000000011223334432 11 13478888888876 37899999976655542
Q ss_pred -CcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecC-CCccccCCchhhhhhhhhCCCcccEEEEee
Q 008476 155 -ESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNV-VGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (564)
Q Consensus 155 -es~pf~ea~rq~~~~~~~~~~~~~h~~~vp~~~~-~~e~ktkptq~svk~l~s~Gi~pd~lv~R~ 218 (564)
+..-..+-++++... ++.| ... .|- -.-|.-+++.|++.|+. .++|+-.
T Consensus 148 ~~~~~~adlA~~l~~p-----VILV-------~~~~lg~--i~~~~lt~~~l~~~g~~-~GvIlN~ 198 (242)
T 3qxc_A 148 TLEENMLDFALKLKAK-----MLLI-------SHDNLGL--INDCLLNDFLLKSHQLD-YKIAINL 198 (242)
T ss_dssp SSSCBHHHHHHHHTCE-----EEEE-------ECCSTTH--HHHHHHHHHHHHTSSSC-EEEEECC
T ss_pred cccchHHHHHHHcCCC-----EEEE-------EcCCCcH--HHHHHHHHHHHHhCCCC-EEEEEeC
Confidence 333445666666432 2221 221 121 12456677888899999 8888743
No 44
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=96.72 E-value=0.0028 Score=60.05 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=61.9
Q ss_pred eEEEEEeccCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCC---Ccccc-cccCCchhhhHHHHhc---cCCCEEEeC
Q 008476 298 VRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPAC---DLEDA-TEKENPDAYKAAWKLL---KGADGILVP 369 (564)
Q Consensus 298 ~~IavVGkY~~~~Da-y~SIi~aL~~aG~~v~v~v~i~wi~s~---~le~~-~~~~~p~~y~~~~~~L---~~~DGIllp 369 (564)
.||+++ =|....+. +....+.|+.+|+++.+ +..+ .+... ...-.++ ...+.. .++|.|+||
T Consensus 4 ~~v~il-l~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~~~~~v~~~~g~~v~~d---~~l~~~~~~~~~D~livp 73 (197)
T 2rk3_A 4 KRALVI-LAKGAEEMETVIPVDVMRRAGIKVTV------AGLAGKDPVQCSRDVVICPD---ASLEDAKKEGPYDVVVLP 73 (197)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEE------EETTCSSCEECTTSCEECCS---EEHHHHHTTCCCSEEEEC
T ss_pred CEEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEE------EEcCCCCccccCCCCEEeCC---cCHHHcCCccCCCEEEEC
Confidence 478877 45544433 55788999999977644 2211 01100 0000010 011223 689999999
Q ss_pred CCCCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 370 GGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 370 GGfG~r----~~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
||++.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 74 GG~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 114 (197)
T 2rk3_A 74 GGNLGAQNLSESAAVKEILKEQENRKGLIATICAGPTALLA 114 (197)
T ss_dssp CCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred CCchhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 997432 1255778889999999999999999999863
No 45
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=96.72 E-value=0.004 Score=58.39 Aligned_cols=100 Identities=18% Similarity=0.204 Sum_probs=61.6
Q ss_pred ceEEEEEeccCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCCCccc------c--cccCCchhhhHHHHhc--cCCCE
Q 008476 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLED------A--TEKENPDAYKAAWKLL--KGADG 365 (564)
Q Consensus 297 ~~~IavVGkY~~~~D-ay~SIi~aL~~aG~~v~v~v~i~wi~s~~le~------~--~~~~~p~~y~~~~~~L--~~~DG 365 (564)
..||+++ -|....+ .+....+.|+.+|+++.+. ..+...+.. . ....+. .+ +.+ ..+|.
T Consensus 9 ~~~v~il-~~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~v~~~~~~~~~g~~v~~~~-~~----~~~~~~~~D~ 78 (190)
T 2vrn_A 9 GKKIAIL-AADGVEEIELTSPRAAIEAAGGTTELI----SLEPGEIQSMKGDIEPQEKYRVDH-VV----SEVQVSDYDG 78 (190)
T ss_dssp TCEEEEE-CCTTCBHHHHHHHHHHHHHTTCEEEEE----ESSSSEEEEEETTTEEEEEEECSE-EG----GGCCGGGCSE
T ss_pred CCEEEEE-eCCCCCHHHHHHHHHHHHHCCCEEEEE----ecCCCccccccccccCCcEEeCCC-Ch----hhCChhhCCE
Confidence 4689998 5654442 2557788999999776441 111110100 0 000000 01 222 57899
Q ss_pred EEeCCCCCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 366 ILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 366 IllpGGfG~r----~~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
|+||||++.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 79 livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~ 123 (190)
T 2vrn_A 79 LLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSE 123 (190)
T ss_dssp EEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHH
T ss_pred EEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHh
Confidence 9999997432 2356788899999999999999999999864
No 46
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=96.67 E-value=0.0046 Score=57.68 Aligned_cols=97 Identities=16% Similarity=0.225 Sum_probs=70.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~ 80 (564)
||.|.|+++ -.|.||=.+|+.++..|..+|++|.++..||.-|.- .|+..
T Consensus 1 M~vi~v~s~-kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~-----------------------------~~~~~ 50 (206)
T 4dzz_A 1 MKVISFLNP-KGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLT-----------------------------NWSKA 50 (206)
T ss_dssp CEEEEECCS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-----------------------------HHHTT
T ss_pred CeEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHH-----------------------------HHHhc
Confidence 788989876 788999999999999999999999999999643321 01100
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 008476 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (564)
Q Consensus 81 ~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdies~pf~ 160 (564)
. .. .+.++|--.+.+.+.+..+. ..+|++||+.++..++ ...
T Consensus 51 ~---------------------~~-----~~~~~~~~~~~l~~~l~~l~--------~~yD~viiD~~~~~~~----~~~ 92 (206)
T 4dzz_A 51 G---------------------KA-----AFDVFTAASEKDVYGIRKDL--------ADYDFAIVDGAGSLSV----ITS 92 (206)
T ss_dssp S---------------------CC-----SSEEEECCSHHHHHTHHHHT--------TTSSEEEEECCSSSSH----HHH
T ss_pred C---------------------CC-----CCcEEecCcHHHHHHHHHhc--------CCCCEEEEECCCCCCH----HHH
Confidence 0 00 04566655688888888875 3699999999998854 344
Q ss_pred HHHHH
Q 008476 161 EALGQ 165 (564)
Q Consensus 161 ea~rq 165 (564)
.+++.
T Consensus 93 ~~l~~ 97 (206)
T 4dzz_A 93 AAVMV 97 (206)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 47
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=96.55 E-value=0.0053 Score=57.75 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=60.1
Q ss_pred eEEEEEeccCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCC---Ccccc-cccCCchhhhHHHHh--ccCCCEEEeCC
Q 008476 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPAC---DLEDA-TEKENPDAYKAAWKL--LKGADGILVPG 370 (564)
Q Consensus 298 ~~IavVGkY~~~~D-ay~SIi~aL~~aG~~v~v~v~i~wi~s~---~le~~-~~~~~p~~y~~~~~~--L~~~DGIllpG 370 (564)
.||+++ =+....+ .+....+.|+.+|+++.+ +..+ .+... ...-.++. ..+. ...+|.|+|||
T Consensus 6 kkv~il-l~~g~~~~e~~~~~~~l~~ag~~v~~------~s~~~~~~v~~~~g~~i~~d~---~l~~~~~~~~D~livpG 75 (190)
T 4e08_A 6 KSALVI-LAPGAEEMEFIIAADVLRRAGIKVTV------AGLNGGEAVKCSRDVQILPDT---SLAQVASDKFDVVVLPG 75 (190)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEE------EESSSSSCEECTTSCEEECSE---ETGGGTTCCCSEEEECC
T ss_pred cEEEEE-ECCCchHHHHHHHHHHHHHCCCEEEE------EECCCCcceecCCCcEEECCC---CHHHCCcccCCEEEECC
Confidence 467776 4444432 255788999999977644 2221 11100 00000000 0122 24689999999
Q ss_pred CCC-CC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 371 GFG-NR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 371 GfG-~r---~~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
|.+ .. .....+..++.+.++++|+.+||-|-++|+-
T Consensus 76 G~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~ 115 (190)
T 4e08_A 76 GLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAK 115 (190)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred CChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 953 22 2245778899999999999999999999863
No 48
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=96.38 E-value=0.0041 Score=59.47 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=60.6
Q ss_pred eEEEEEeccCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCC---Ccccc---cccCCchhhhHHHH-hccCCCEEEeC
Q 008476 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPAC---DLEDA---TEKENPDAYKAAWK-LLKGADGILVP 369 (564)
Q Consensus 298 ~~IavVGkY~~~~D-ay~SIi~aL~~aG~~v~v~v~i~wi~s~---~le~~---~~~~~p~~y~~~~~-~L~~~DGIllp 369 (564)
.||+++ -|....+ ......+.|+.+|+++.+ ...+.. .+... ....+ ..+ .+ ...++|.|+||
T Consensus 3 ~kV~il-l~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~~~~~~~v~~~~g~~v~~~-~~l---~~~~~~~~D~livp 73 (205)
T 2ab0_A 3 ASALVC-LAPGSEETEAVTTIDLLVRGGIKVTT----ASVASDGNLAITCSRGVKLLAD-APL---VEVADGEYDVIVLP 73 (205)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEE----EECSSTTCCEEECTTSCEEECS-EEH---HHHTTSCCSEEEEC
T ss_pred cEEEEE-EcCCCcHHHHHHHHHHHHHCCCEEEE----EeCCCCCCceeecCCCeEEecC-CCH---HHCCcccCCEEEEC
Confidence 367777 4544432 255778899999977644 111111 01000 00000 011 11 13679999999
Q ss_pred CCCCCC----chhHHHHHHHHHHHcCCCEEEEehhH-HHHH
Q 008476 370 GGFGNR----GVQGKILAAKYAREHRIPYLGICLGM-QVAV 405 (564)
Q Consensus 370 GGfG~r----~~eg~i~~ir~a~e~~iPiLGICLGm-Qll~ 405 (564)
||++.. ..+..+..++.+.++++|+.+||-|- ++|+
T Consensus 74 GG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa 114 (205)
T 2ab0_A 74 GGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLV 114 (205)
T ss_dssp CCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTT
T ss_pred CCcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHH
Confidence 997532 23557788899999999999999999 8886
No 49
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=96.37 E-value=0.0071 Score=59.13 Aligned_cols=167 Identities=15% Similarity=0.210 Sum_probs=91.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~ 80 (564)
||-||||| .=|+.||=++++.|.+.|+.+|++|...| |.++|-.+ .+|| ..|-|... +..+.
T Consensus 4 mk~i~Itg-t~t~vGKT~vt~~L~~~l~~~G~~V~~~K-------------Pv~~g~~~-~~~~-~~~~D~~~--~~~~~ 65 (228)
T 3of5_A 4 MKKFFIIG-TDTEVGKTYISTKLIEVCEHQNIKSLCLK-------------PVASGQSQ-FSEL-CEDVESIL--NAYKH 65 (228)
T ss_dssp CEEEEEEE-SSSSSCHHHHHHHHHHHHHHTTCCEEEEC-------------SEEESBCS-SSSS-BHHHHHHH--HHTTT
T ss_pred CcEEEEEe-CCCCCCHHHHHHHHHHHHHHCCCeeEEec-------------ceeecCcc-CCCC-CChHHHHH--HhcCC
Confidence 68899986 56999999999999999999999999966 45555322 1222 11112211 22222
Q ss_pred CCCCCCcccchHhhH----HHHhhhhcCCCCCCeeEEcccchHHHHHHHHH-HhcccCCCCCCCCcEEEEeeCccccc--
Q 008476 81 KLTRDNNITTGKIYQ----SVIDKERKGDYLGKTVQVVPHITDEIQDWIER-VAMIPVDGKEGPVDVCVIELGGTIGD-- 153 (564)
Q Consensus 81 ~~~~~~~~t~g~iy~----~vi~ker~g~ylg~tvqviph~t~~i~~~i~~-~~~~p~~~~~~~~d~~i~e~ggtvgd-- 153 (564)
.++.++ + ..-.|. --+..++.| ++ ---++|++.+.+ ++ .++|++|||--|-+.+
T Consensus 66 ~~~~~~-~-~~~~~~~p~sp~~aa~~~~----~~-----i~~~~i~~~~~~~l~--------~~~D~vlIEgaggl~~p~ 126 (228)
T 3of5_A 66 KFTAAE-I-NLISFNQAVAPHIIAAKTK----VD-----ISIENLKQFIEDKYN--------QDLDILFIEGAGGLLTPY 126 (228)
T ss_dssp SSCHHH-H-CSEEESSSSCHHHHHHHTT----CC-----CCHHHHHHHHHGGGG--------SSCSEEEEEEEEETTCBS
T ss_pred CCChhh-E-EEEEECCCCCHHHHHHHcC----CC-----CCHHHHHHHHHHHHH--------ccCCEEEEECCCcccccc
Confidence 211100 0 000010 011112222 11 123778888887 65 3789999996554433
Q ss_pred cCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEe
Q 008476 154 IESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACR 217 (564)
Q Consensus 154 ies~pf~ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R 217 (564)
-+..-..+-++++... ++.| --.+ .|- -.-+..+++.|+..|+..-++|+-
T Consensus 127 ~~~~~~adla~~l~~p-----viLV-----~~~~-~~~--i~~~~~~~~~l~~~~~~i~GvIlN 177 (228)
T 3of5_A 127 SDHTTQLDLIKALQIP-----VLLV-----SAIK-VGC--INHTLLTINELNRHNIKLAGWIAN 177 (228)
T ss_dssp SSSCBHHHHHHHHTCC-----EEEE-----EECS-TTH--HHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccchhHHHHHHHcCCC-----EEEE-----EcCC-cch--HHHHHHHHHHHHhCCCcEEEEEEE
Confidence 1233344555555321 2221 1111 122 223566777888999998888874
No 50
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=96.30 E-value=0.003 Score=59.59 Aligned_cols=46 Identities=20% Similarity=0.129 Sum_probs=39.1
Q ss_pred cCCCEEEeCCCCCCCc---hhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 361 KGADGILVPGGFGNRG---VQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~---~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
.++|+|+||||+|... .+..++.++.+.++++|+.+||-|-++|+-
T Consensus 68 ~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La~ 116 (177)
T 4hcj_A 68 VEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMAN 116 (177)
T ss_dssp GGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred hHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHHH
Confidence 5789999999988643 356788899999999999999999998853
No 51
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=96.23 E-value=0.0086 Score=57.59 Aligned_cols=106 Identities=14% Similarity=0.031 Sum_probs=63.2
Q ss_pred CceEEEEEeccCCCcch-HHHHHHHHHHcCCc---ceeeeEEEEecCCC--cccc-cccCCchhhhHHHHhccCCCEEEe
Q 008476 296 EPVRIAMVGKYTGLSDA-YLSILKALLHASVD---LRKKLVIDWIPACD--LEDA-TEKENPDAYKAAWKLLKGADGILV 368 (564)
Q Consensus 296 ~~~~IavVGkY~~~~Da-y~SIi~aL~~aG~~---v~v~v~i~wi~s~~--le~~-~~~~~p~~y~~~~~~L~~~DGIll 368 (564)
...+|+++ =|....+. ....++.|+.++-. .... +..+..+. +... ...-.+ +...+.+..+|.|+|
T Consensus 7 ~~~~v~il-l~~g~~~~e~~~~~d~l~~a~~~~~~~~~~--v~~vs~~~~~v~~~~G~~v~~---d~~~~~~~~~D~liv 80 (209)
T 3er6_A 7 KNLRVVAL-APTGRYFASIISSLEILETAAEFAEFQGFM--THVVTPNNRPLIGRGGISVQP---TAQWQSFDFTNILII 80 (209)
T ss_dssp CCEEEEEE-CCCTTSCHHHHHHHHHHHHHHHHTTCSCEE--EEEECTTSSCEEETTTEEEEC---SSCGGGCSCCSEEEE
T ss_pred CCeEEEEE-EeCCCCHHHHHHHHHHHHHHHhhcCCCCcE--EEEEeCCCCceecCCCeEEeC---CcCccccCCCCEEEE
Confidence 45688888 56555443 55778888877511 1111 12232211 1100 000000 001234578999999
Q ss_pred CCCCCCCc-----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008476 369 PGGFGNRG-----VQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (564)
Q Consensus 369 pGGfG~r~-----~eg~i~~ir~a~e~~iPiLGICLGmQll~ia 407 (564)
|||.+... .+..+..++.+.++++++.+||-|-.+|+-+
T Consensus 81 pGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~a 124 (209)
T 3er6_A 81 GSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKA 124 (209)
T ss_dssp CCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHH
T ss_pred CCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHHc
Confidence 99976422 3567888999999999999999999988643
No 52
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=96.15 E-value=0.0093 Score=55.99 Aligned_cols=45 Identities=20% Similarity=0.230 Sum_probs=37.2
Q ss_pred CCCEEEeCCCCCCC--chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 362 GADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 362 ~~DGIllpGGfG~r--~~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
.+|.|+||||.+.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 63 ~~D~livpGG~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~ 109 (188)
T 2fex_A 63 DIDALVIPGGLSWEKGTAADLGGLVKRFRDRDRLVAGICAAASALGG 109 (188)
T ss_dssp TCSEEEECCBSHHHHTCCCCCHHHHHHHHHTTCEEEEETHHHHHHHH
T ss_pred cCCEEEECCCCcccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 78999999997532 2245678889999999999999999999863
No 53
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=96.04 E-value=0.018 Score=55.31 Aligned_cols=46 Identities=17% Similarity=0.091 Sum_probs=38.6
Q ss_pred cCCCEEEeCCCCCCC--chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 361 KGADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 361 ~~~DGIllpGGfG~r--~~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
..+|.|+||||.+.+ ..+..+..++.+.++++|+.+||-|-.+|+-
T Consensus 73 ~~~D~livpGG~~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~ 120 (212)
T 3efe_A 73 ESKDLLILPGGTTWSEEIHQPILERIGQALKIGTIVAAICGATDALAN 120 (212)
T ss_dssp CTTCEEEECCCSCTTSGGGHHHHHHHHHHHHHTCEEEEETHHHHHHHH
T ss_pred cCCCEEEECCCCccccccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHH
Confidence 389999999998754 2356788899999999999999999998853
No 54
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=95.78 E-value=0.032 Score=53.27 Aligned_cols=48 Identities=19% Similarity=0.070 Sum_probs=39.5
Q ss_pred ccCCCEEEeCCCCCCCch-hHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008476 360 LKGADGILVPGGFGNRGV-QGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (564)
Q Consensus 360 L~~~DGIllpGGfG~r~~-eg~i~~ir~a~e~~iPiLGICLGmQll~ia 407 (564)
...+|.|+||||.+.... +..+..++.+.++++++.+||-|-.+|+-+
T Consensus 69 ~~~~D~livpGG~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~a 117 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKYPELDRLLNDCAAHGMALGGLWNGAWFLGRA 117 (202)
T ss_dssp GTTCSEEEEECCTTCCSCCTTHHHHHHHHHHHTCEEEEETTHHHHHHHH
T ss_pred CCCCCEEEEeCCCchhhccHHHHHHHHHHHhhCCEEEEECHHHHHHHHc
Confidence 467999999999765321 667888999999999999999999998643
No 55
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=95.72 E-value=0.02 Score=56.99 Aligned_cols=167 Identities=19% Similarity=0.239 Sum_probs=89.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~ 80 (564)
||-||||| .=|+.||=++++.|.+.|+.+|++|...| |.+.|-. .|+ -|.....+..+.
T Consensus 26 m~~i~Itg-t~t~vGKT~vt~gL~~~l~~~G~~V~~fK-------------Pv~~g~~---~~~----~D~~~~~~~~g~ 84 (251)
T 3fgn_A 26 MTILVVTG-TGTGVGKTVVCAALASAARQAGIDVAVCK-------------PVQTGTA---RGD----DDLAEVGRLAGV 84 (251)
T ss_dssp CEEEEEEE-SSTTSCHHHHHHHHHHHHHHTTCCEEEEE-------------EEECCGG---GTC----CHHHHHHHHHCC
T ss_pred CCEEEEEe-CCCCCcHHHHHHHHHHHHHHCCCeEEEEe-------------eeecCCC---CCC----HHHHHHHHHcCC
Confidence 57888886 67999999999999999999999999988 2233310 111 222222333222
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc--Cc-c
Q 008476 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI--ES-M 157 (564)
Q Consensus 81 ~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdi--es-~ 157 (564)
... .|-++--.-..--+..++.|.. . ---++|++.+.+++ .++|++|||==|-+.|- +. .
T Consensus 85 ~~~-~~~~~~~~p~sP~~aa~~~~~~---~-----~~~~~i~~~~~~l~--------~~~D~vlIEGagGl~~pl~~~~~ 147 (251)
T 3fgn_A 85 TQL-AGLARYPQPMAPAAAAEHAGMA---L-----PARDQIVRLIADLD--------RPGRLTLVEGAGGLLVELAEPGV 147 (251)
T ss_dssp CEE-EEEEECSSSSCHHHHHHHTTCC---C-----CCHHHHHHHHHTTC--------CTTCEEEEECSSSTTCEEETTTE
T ss_pred CCC-CCCeeECCCCChHHHHHHcCCC---C-----CCHHHHHHHHHHHH--------hcCCEEEEECCCCCcCCcCcccc
Confidence 111 0000000000111122222220 0 11356788777764 47899999975555431 11 2
Q ss_pred hHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEee
Q 008476 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (564)
Q Consensus 158 pf~ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~ 218 (564)
-..+-++++... ++. |--.+ .|-. .-+.-+++.|+..|+...++|+-.
T Consensus 148 ~~adla~~l~~p-----VIL-----V~~~~-~g~i--~~~~lt~~~l~~~g~~i~GvIlN~ 195 (251)
T 3fgn_A 148 TLRDVAVDVAAA-----ALV-----VVTAD-LGTL--NHTKLTLEALAAQQVSCAGLVIGS 195 (251)
T ss_dssp EHHHHHHHTTCE-----EEE-----EECSS-TTHH--HHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred hHHHHHHHcCCC-----EEE-----EEcCC-CccH--HHHHHHHHHHHhCCCCEEEEEEEC
Confidence 334445554322 221 11111 1222 235667778889999999999843
No 56
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=95.69 E-value=0.019 Score=60.33 Aligned_cols=46 Identities=22% Similarity=0.322 Sum_probs=38.5
Q ss_pred cCCCEEEeCCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 361 ~~~DGIllpGGfG~r---~~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
..+|.|+||||+|.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 281 ~~~D~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~ 329 (396)
T 3uk7_A 281 SSYDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAA 329 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHH
T ss_pred ccCCEEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHH
Confidence 578999999998642 2356788899999999999999999999864
No 57
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=95.58 E-value=0.037 Score=62.35 Aligned_cols=96 Identities=13% Similarity=0.088 Sum_probs=62.9
Q ss_pred ceEEEEEeccCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCC-
Q 008476 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN- 374 (564)
Q Consensus 297 ~~~IavVGkY~~~~D-ay~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~- 374 (564)
..||||+-.=+...+ ....+.++|+.+|+.+.+ |... ... .++ ..|.+ -....+|+|+||||...
T Consensus 537 grKVaILvadG~fE~~El~~p~~aL~~aGa~V~v------Vsp~-~g~-GvD---~t~~~--~~s~~fDAVvlPGG~~~~ 603 (688)
T 3ej6_A 537 TLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTV------IAEY-LAS-GVD---QTYSA--ADATAFDAVVVAEGAERV 603 (688)
T ss_dssp TCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEE------EESS-CCT-TCC---EETTT--CCGGGCSEEEECTTCCTT
T ss_pred CCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEE------EeCC-CCC-Ccc---cCccc--CChhcCcEEEECCCcccc
Confidence 468998832111221 467899999999999876 3221 100 010 00100 01246899999999532
Q ss_pred ----------CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008476 375 ----------RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (564)
Q Consensus 375 ----------r~~eg~i~~ir~a~e~~iPiLGICLGmQll~ 405 (564)
+.....+..++.+.++++|+-.||-|-|+|.
T Consensus 604 ~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~ 644 (688)
T 3ej6_A 604 FSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQ 644 (688)
T ss_dssp TSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHH
T ss_pred cccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHH
Confidence 2235688999999999999999999999995
No 58
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=95.48 E-value=0.0094 Score=59.05 Aligned_cols=47 Identities=21% Similarity=0.313 Sum_probs=39.4
Q ss_pred cCCCEEEeCCCCCC---------------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008476 361 KGADGILVPGGFGN---------------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (564)
Q Consensus 361 ~~~DGIllpGGfG~---------------r~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia 407 (564)
.++|+|+||||+|. +..+.....++.+.++++|+.+||-|-.+|+-+
T Consensus 106 ~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~a 167 (242)
T 3l3b_A 106 EEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVAL 167 (242)
T ss_dssp GGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHH
T ss_pred ccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHh
Confidence 47899999999863 223667889999999999999999999999754
No 59
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=95.44 E-value=0.086 Score=51.23 Aligned_cols=41 Identities=29% Similarity=0.453 Sum_probs=37.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
+|.|.|+++ -.|.||=.+|+.|+..|..+|++|.++.+||.
T Consensus 2 ~~~I~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (263)
T 1hyq_A 2 VRTITVASG-KGGTGKTTITANLGVALAQLGHDVTIVDADIT 42 (263)
T ss_dssp CEEEEEEES-SSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CeEEEEECC-CCCCCHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 478888876 57999999999999999999999999999995
No 60
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.35 E-value=0.011 Score=54.59 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=37.8
Q ss_pred cCCCEEEeCCC--C-CCC------chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 361 KGADGILVPGG--F-GNR------GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 361 ~~~DGIllpGG--f-G~r------~~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
.++|.|+|||| + +.. ..+..++.++.+.++++|+.+||-|-++|+-
T Consensus 65 ~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 119 (175)
T 3cne_A 65 DEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDF 119 (175)
T ss_dssp GGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred ccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 67899999999 6 542 2245778888898999999999999999864
No 61
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=95.29 E-value=0.019 Score=53.88 Aligned_cols=44 Identities=20% Similarity=0.071 Sum_probs=36.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy-ln~d 46 (564)
|+.|.++| .||-||-..+..|-..|+.+|++|..+|.||. .++|
T Consensus 4 ~~~i~i~G--~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~~~~diD 48 (169)
T 1xjc_A 4 MNVWQVVG--YKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPA 48 (169)
T ss_dssp CCEEEEEC--CTTSSHHHHHHHHHHHHHHTTCCEEEEECCC------
T ss_pred CEEEEEEC--CCCCCHHHHHHHHHHhhHhcCCeeeEEEeCCCCcccc
Confidence 56788898 78999999999999999999999999999997 5666
No 62
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=95.24 E-value=0.037 Score=58.06 Aligned_cols=47 Identities=21% Similarity=0.333 Sum_probs=38.8
Q ss_pred cCCCEEEeCCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008476 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (564)
Q Consensus 361 ~~~DGIllpGGfG~r---~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia 407 (564)
..+|.|+||||.|.. ..+..+..++.+.++++|+.+||-|-++|+-+
T Consensus 88 ~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~a 137 (396)
T 3uk7_A 88 SKYDGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAAA 137 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHT
T ss_pred ccCCEEEECCCcchhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHhc
Confidence 578999999997642 22567888999999999999999999998643
No 63
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=95.23 E-value=0.02 Score=64.95 Aligned_cols=100 Identities=16% Similarity=0.095 Sum_probs=62.2
Q ss_pred ceEEEEEeccCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCCCcccc---cccCCchhhhHHHHhccCCCEEEeCCCC
Q 008476 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDA---TEKENPDAYKAAWKLLKGADGILVPGGF 372 (564)
Q Consensus 297 ~~~IavVGkY~~~~D-ay~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~---~~~~~p~~y~~~~~~L~~~DGIllpGGf 372 (564)
..||||+ =.....+ ...+++++|+.+|+.+.+. -.....+... .+..|. .++++ ....+|+|+||||
T Consensus 600 grKVaIL-laDGfEe~El~~pvdaLr~AG~~V~vV----S~~~g~V~gs~G~~V~aD~-t~~~v--~s~~fDALVVPGG- 670 (753)
T 3ttv_A 600 GRVVAIL-LNDEVRSADLLAILKALKAKGVHAKLL----YSRMGEVTADDGTVLPIAA-TFAGA--PSLTVDAVIVPCG- 670 (753)
T ss_dssp TCEEEEE-CCTTCCHHHHHHHHHHHHHHTCEEEEE----ESSSSEEECTTSCEEECCE-ETTTS--CGGGCSEEEECCS-
T ss_pred CCEEEEE-ecCCCCHHHHHHHHHHHHHCCCEEEEE----EcCCCeEEeCCCCEEeccc-chhhC--CCcCCCEEEECCC-
Confidence 4689887 3333332 3679999999999987551 1111111100 000000 01000 1135899999999
Q ss_pred CCCc---hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008476 373 GNRG---VQGKILAAKYAREHRIPYLGICLGMQVAV 405 (564)
Q Consensus 373 G~r~---~eg~i~~ir~a~e~~iPiLGICLGmQll~ 405 (564)
|... ....+..++.+.++++|+-+||-|-++|+
T Consensus 671 g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa 706 (753)
T 3ttv_A 671 NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKA 706 (753)
T ss_dssp CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGG
T ss_pred ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHH
Confidence 6432 35688899999999999999999999985
No 64
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=95.20 E-value=0.021 Score=54.67 Aligned_cols=98 Identities=14% Similarity=0.186 Sum_probs=60.8
Q ss_pred eEEEEEeccCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCC---Ccccc-cccCCchhhhHHHHhc--cCCCEEEeCC
Q 008476 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPAC---DLEDA-TEKENPDAYKAAWKLL--KGADGILVPG 370 (564)
Q Consensus 298 ~~IavVGkY~~~~D-ay~SIi~aL~~aG~~v~v~v~i~wi~s~---~le~~-~~~~~p~~y~~~~~~L--~~~DGIllpG 370 (564)
.||+++ =|....+ .....++.|+.+|+++.+ +..+ .+... ...-.++ ...+.+ ..+|.|+|||
T Consensus 10 ~~v~il-l~~g~~~~e~~~~~~~l~~ag~~v~~------vs~~g~~~v~~~~G~~v~~d---~~l~~~~~~~~D~livpG 79 (208)
T 3ot1_A 10 KRILVP-VAHGSEEMETVIIVDTLVRAGFQVTM------AAVGDKLQVQGSRGVWLTAE---QTLEACSAEAFDALALPG 79 (208)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEE------EESSSCSEEECTTSCEEECS---EEGGGCCGGGCSEEEECC
T ss_pred CeEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEE------EEcCCCcceecCCCcEEeCC---CCHHHCCCcCCCEEEECC
Confidence 478887 4554443 355788999999977654 2221 11100 0000000 001222 4789999999
Q ss_pred CCCCC----chhHHHHHHHHHHHcCCCEEEEehhH-HHHH
Q 008476 371 GFGNR----GVQGKILAAKYAREHRIPYLGICLGM-QVAV 405 (564)
Q Consensus 371 GfG~r----~~eg~i~~ir~a~e~~iPiLGICLGm-Qll~ 405 (564)
|.+.. ..+..+..++.+.++++|+.+||-|- .+|+
T Consensus 80 G~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La 119 (208)
T 3ot1_A 80 GVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFA 119 (208)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTT
T ss_pred CchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHH
Confidence 97432 23567888999999999999999998 7774
No 65
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=95.13 E-value=0.012 Score=56.67 Aligned_cols=100 Identities=14% Similarity=0.161 Sum_probs=59.8
Q ss_pred ceEEEEEeccCCCcch-HHHHHHHHHHcC--CcceeeeEEEEecCCC--cccc-cccCCchhhhHHHHhccCCCEEEeCC
Q 008476 297 PVRIAMVGKYTGLSDA-YLSILKALLHAS--VDLRKKLVIDWIPACD--LEDA-TEKENPDAYKAAWKLLKGADGILVPG 370 (564)
Q Consensus 297 ~~~IavVGkY~~~~Da-y~SIi~aL~~aG--~~v~v~v~i~wi~s~~--le~~-~~~~~p~~y~~~~~~L~~~DGIllpG 370 (564)
..||+++ =|....+. ....++.|+.++ +++.+ +..+. +... ...-.++ ...+....+|.|+|||
T Consensus 4 ~~~V~il-l~~g~~~~e~~~~~~~l~~a~~~~~v~~------vs~~~~~V~~~~G~~v~~d---~~~~~~~~~D~livpG 73 (211)
T 3mgk_A 4 SYRIDVL-LFNKFETLDVFGPVEIFGNLQDDFELNF------ISSDGGLVESSQKVRVETS---LYTRDENIEKILFVPG 73 (211)
T ss_dssp CEEEEEE-CCTTCCHHHHHHHHHHHTTCTTTEEEEE------ECSSCEEEECTTCCEEEEB---CCCCCSSSEEEEEECC
T ss_pred ceEEEEE-EeCCcchhHHHHHHHHHHhCCCceEEEE------EECCCCeEecCCCcEEEec---cchhhCCCCCEEEECC
Confidence 4688888 56555432 457788888874 33322 22110 1000 0000000 0012234579999999
Q ss_pred CCCCCc---hhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 371 GFGNRG---VQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 371 GfG~r~---~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
|+|... .+..+..++.+.++++++.+||-|-.+|+-
T Consensus 74 G~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La~ 112 (211)
T 3mgk_A 74 GSGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLSK 112 (211)
T ss_dssp STHHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHHH
T ss_pred CcchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHHh
Confidence 976532 246788899999999999999999998863
No 66
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=95.08 E-value=0.15 Score=50.00 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=37.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
+|-|.|+++ -.|.||=.+|+.|+..|..+|+||-++.+||.-
T Consensus 18 ~~vI~v~s~-kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSG-KGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 367888876 479999999999999999999999999999986
No 67
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=95.05 E-value=0.03 Score=53.77 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=38.4
Q ss_pred cCCCEEEeCCCCCCC-chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 361 KGADGILVPGGFGNR-GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 361 ~~~DGIllpGGfG~r-~~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
.++|.|+||||.|.. ..+..++.++.+.++++|+.+||-|-++|+-
T Consensus 62 ~~~D~livpGG~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~ 108 (206)
T 3f5d_A 62 ANFNLLVMIGGDSWSNDNKKLLHFVKTAFQKNIPIAAICGAVDFLAK 108 (206)
T ss_dssp SCCSEEEECCBSCCCCCCHHHHHHHHHHHHTTCCEEEETHHHHHHHH
T ss_pred cCCCEEEEcCCCChhhcCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 478999999998654 2356778899999999999999999999863
No 68
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=95.03 E-value=0.0099 Score=57.96 Aligned_cols=47 Identities=21% Similarity=0.279 Sum_probs=39.3
Q ss_pred cCCCEEEeCCCCCCC--------------chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 008476 361 KGADGILVPGGFGNR--------------GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (564)
Q Consensus 361 ~~~DGIllpGGfG~r--------------~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia 407 (564)
.++|+|+||||+|.. ..+..++.++.+.++++|+.+||-|-++|+-+
T Consensus 89 ~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a 149 (232)
T 1vhq_A 89 AELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI 149 (232)
T ss_dssp GGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH
T ss_pred ccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH
Confidence 579999999998741 13567888999999999999999999998755
No 69
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=95.02 E-value=0.046 Score=57.40 Aligned_cols=102 Identities=15% Similarity=0.202 Sum_probs=62.6
Q ss_pred ceEEEEEeccCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCC-ccc-ccc-cCCchhhhHHHHhc--cCCCEEEeCC
Q 008476 297 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACD-LED-ATE-KENPDAYKAAWKLL--KGADGILVPG 370 (564)
Q Consensus 297 ~~~IavVGkY~~~~Da-y~SIi~aL~~aG~~v~v~v~i~wi~s~~-le~-~~~-~~~p~~y~~~~~~L--~~~DGIllpG 370 (564)
..||+++ =|..+.+. .....+.|+.+|+++.+- -.+... +.. ... .-.++ ...+.+ ..+|.|+|||
T Consensus 10 mkkV~IL-l~dgf~~~El~~p~dvL~~Ag~~v~vv----S~~~g~~V~ss~G~~~i~~d---~~l~~v~~~~~DaLiVPG 81 (365)
T 3fse_A 10 KKKVAIL-IEQAVEDTEFIIPCNGLKQAGFEVVVL----GSRMNEKYKGKRGRLSTQAD---GTTTEAIASEFDAVVIPG 81 (365)
T ss_dssp -CEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEEE----ESSSSCCEECTTSCCEECCS---EETTTCCGGGCSEEEECC
T ss_pred ceEEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEEE----ECCCCceeecCCCceEEeCC---CCHhhCCCcCCCEEEEEC
Confidence 4578888 56555433 557889999999776441 111110 110 000 00000 001222 3689999999
Q ss_pred CCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 371 GFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 371 GfG~r---~~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
|.|.. ..+..+..++.+.++++|+.+||-|-.+|+-
T Consensus 82 G~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA~ 120 (365)
T 3fse_A 82 GMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLIE 120 (365)
T ss_dssp BTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred CcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 98642 2356788899999999999999999999853
No 70
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=94.79 E-value=0.23 Score=53.10 Aligned_cols=40 Identities=28% Similarity=0.493 Sum_probs=36.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~-g~~v~~~k~dpyl 43 (564)
+.|.++| .+|.||=.+++.|+..|+.+ |++|.++..|||-
T Consensus 101 ~vI~ivG--~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 101 AVVLMAG--LQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 5678885 49999999999999999999 9999999999985
No 71
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=94.78 E-value=0.039 Score=56.17 Aligned_cols=108 Identities=13% Similarity=0.082 Sum_probs=68.7
Q ss_pred HHHHHHHhhhcCCCCceEEEEEeccCC-CcchHH-HHHHHHHHcCCc-ceeeeEEEEecCCCcccccccCCchhhhHHHH
Q 008476 282 KEWTSRAEICDGLHEPVRIAMVGKYTG-LSDAYL-SILKALLHASVD-LRKKLVIDWIPACDLEDATEKENPDAYKAAWK 358 (564)
Q Consensus 282 ~~w~~~~~~~~~~~~~~~IavVGkY~~-~~Day~-SIi~aL~~aG~~-v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~ 358 (564)
.-|+.+++.... ...+|+++ -+-. ..+.|. .+.++|+..|+. +.+ ++-.+.+.. .+ .+..+
T Consensus 43 ~i~~~~v~lagg--~~~~I~~I-ptAs~~~~~~~~~~~~~f~~lG~~~v~~------L~i~~r~~a---~~----~~~~~ 106 (291)
T 3en0_A 43 EILQTFWSRSGG--NDAIIGII-PSASREPLLIGERYQTIFSDMGVKELKV------LDIRDRAQG---DD----SGYRL 106 (291)
T ss_dssp HHHHHHHHHTTG--GGCEEEEE-CTTCSSHHHHHHHHHHHHHHHCCSEEEE------CCCCSGGGG---GC----HHHHH
T ss_pred HHHHHHHHHcCC--CCCeEEEE-eCCCCChHHHHHHHHHHHHHcCCCeeEE------EEecCcccc---CC----HHHHH
Confidence 456777766642 24799999 4432 223443 567788888984 322 222111100 01 12345
Q ss_pred hccCCCEEEeCCCCCCCc-----hhHHHHHHHHHHHcC-CCEEEEehhHHHHH
Q 008476 359 LLKGADGILVPGGFGNRG-----VQGKILAAKYAREHR-IPYLGICLGMQVAV 405 (564)
Q Consensus 359 ~L~~~DGIllpGGfG~r~-----~eg~i~~ir~a~e~~-iPiLGICLGmQll~ 405 (564)
.+.++|+|+++||--.+- -.+..++++.+.+++ +|+.|.|-|.-+|+
T Consensus 107 ~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~ 159 (291)
T 3en0_A 107 FVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMG 159 (291)
T ss_dssp HHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTS
T ss_pred HHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhh
Confidence 688999999999732221 146788899998898 99999999998874
No 72
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=94.68 E-value=0.2 Score=49.80 Aligned_cols=40 Identities=25% Similarity=0.329 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
|-|.|+++ -.|.||=.+|+.|+..|..+|+||-++.+||+
T Consensus 5 kvI~v~s~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~ 44 (286)
T 2xj4_A 5 RVIVVGNE-KGGAGKSTIAVHLVTALLYGGAKVAVIDLDLR 44 (286)
T ss_dssp EEEEECCS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred eEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 57777764 58899999999999999999999999999994
No 73
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=94.56 E-value=0.025 Score=59.07 Aligned_cols=41 Identities=22% Similarity=0.144 Sum_probs=36.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
+|-|||||==. ++||+.++..|-+.|+.+|+++..++.-.+
T Consensus 169 ~~ri~v~GTDt-~vGKt~t~~~L~~~l~~~G~~v~~v~tgqt 209 (350)
T 2g0t_A 169 IKVVGVFGTDC-VVGKRTTAVQLWERALEKGIKAGFLATGQT 209 (350)
T ss_dssp SEEEEEEESSS-SSSHHHHHHHHHHHHHHTTCCEEEEECSHH
T ss_pred ceEEEEecCCC-CccCccHHHHHHHHHHhcCCeEEEEccCce
Confidence 36799999777 599999999999999999999999887665
No 74
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=94.43 E-value=0.023 Score=54.59 Aligned_cols=45 Identities=24% Similarity=0.349 Sum_probs=38.3
Q ss_pred cCCCEEEeCCCCCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008476 361 KGADGILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (564)
Q Consensus 361 ~~~DGIllpGGfG~r----~~eg~i~~ir~a~e~~iPiLGICLGmQll~ 405 (564)
..+|+|+||||.+.. ..+..+..++.+.++++|+.+||-|-++|+
T Consensus 88 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La 136 (224)
T 1u9c_A 88 HGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLV 136 (224)
T ss_dssp SSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHH
Confidence 479999999998752 235678899999999999999999999875
No 75
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=94.29 E-value=0.35 Score=52.00 Aligned_cols=40 Identities=23% Similarity=0.377 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
+.|+++|- +|.||=.+++.|+..|+.+|++|.++..|||-
T Consensus 101 ~vIlivG~--~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 101 TILLMVGI--QGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred eEEEEECc--CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 46778875 99999999999999999999999999999973
No 76
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=94.13 E-value=0.094 Score=50.10 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=37.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~-g~~v~~~k~dpy 42 (564)
+|.|.|+++ -.|.||=.+|+.++..|..+ |+||-++.+||.
T Consensus 4 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 4 KRVFGFVSA-KGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CEEEEEEES-STTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CeEEEEECC-CCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 578888876 58999999999999999999 999999999997
No 77
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=93.87 E-value=0.61 Score=49.92 Aligned_cols=39 Identities=28% Similarity=0.456 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
+.|.++|. +|.||=.+++.|+.+|+.+|.+|.++-.|+|
T Consensus 98 ~vI~lvG~--~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~ 136 (433)
T 3kl4_A 98 FIIMLVGV--QGSGKTTTAGKLAYFYKKRGYKVGLVAADVY 136 (433)
T ss_dssp EEEEECCC--TTSCHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 57888875 8999999999999999999999999999976
No 78
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=93.85 E-value=0.042 Score=53.71 Aligned_cols=101 Identities=13% Similarity=0.132 Sum_probs=60.7
Q ss_pred eEEEEEeccCCCcch-HHHHHHHHHH-cCCcceeeeEEEEecCCCcccc-cccCCchhhhHHHHhccCCCEEEeCCCCCC
Q 008476 298 VRIAMVGKYTGLSDA-YLSILKALLH-ASVDLRKKLVIDWIPACDLEDA-TEKENPDAYKAAWKLLKGADGILVPGGFGN 374 (564)
Q Consensus 298 ~~IavVGkY~~~~Da-y~SIi~aL~~-aG~~v~v~v~i~wi~s~~le~~-~~~~~p~~y~~~~~~L~~~DGIllpGGfG~ 374 (564)
.+|+++ =|..+.+. ....++.|+. .++++. +.+.+...+... ...-.++ ...+.+..+|.|+||||+|.
T Consensus 6 ~~V~il-l~~gf~~~e~~~p~evl~~~~~~~v~----~vs~~~~~V~~~~G~~v~~d---~~l~~~~~~D~livpGG~g~ 77 (231)
T 3noq_A 6 VQIGFL-LFPEVQQLDLTGPHDVLASLPDVQVH----LIWKEPGPVVASSGLVLQAT---TSFADCPPLDVICIPGGTGV 77 (231)
T ss_dssp EEEEEE-CCTTCCHHHHHHHHHHHTTSTTEEEE----EEESSSEEEECTTSCEEEEC---EETTTCCCCSEEEECCSTTH
T ss_pred EEEEEE-EeCCCcHHHHHHHHHHHHcCCCCEEE----EEECCCCcEEcCCCCEEecc---cChhHCCcCCEEEECCCCCh
Confidence 578888 56555432 4467778876 454432 222221111100 0000000 01123467999999999875
Q ss_pred Cc---hhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 375 RG---VQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 375 r~---~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
.. .+..+..++.+.++++++.+||-|-.+|+-
T Consensus 78 ~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La~ 112 (231)
T 3noq_A 78 GALMEDPQALAFIRQQAARARYVTSVSTGSLVLGA 112 (231)
T ss_dssp HHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 32 356788899999999999999999988853
No 79
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=93.78 E-value=0.16 Score=48.18 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=35.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
|| |.|+ | -.|.||=.+|+.++..|..+|+||-++.+||-
T Consensus 1 mk-I~vs-~-kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MK-LAVA-G-KGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CE-EEEE-C-SSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CE-EEEe-c-CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 67 5556 4 89999999999999999999999999999994
No 80
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=93.51 E-value=0.025 Score=55.53 Aligned_cols=45 Identities=11% Similarity=0.046 Sum_probs=37.7
Q ss_pred cCCCEEEeCCCCCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008476 361 KGADGILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (564)
Q Consensus 361 ~~~DGIllpGGfG~r----~~eg~i~~ir~a~e~~iPiLGICLGmQll~ 405 (564)
.++|+|+||||.|.. ..+...+.++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La 145 (243)
T 1rw7_A 97 DDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFD 145 (243)
T ss_dssp GGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 468999999998742 235678899999999999999999998774
No 81
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=93.41 E-value=0.033 Score=55.28 Aligned_cols=45 Identities=16% Similarity=0.083 Sum_probs=38.2
Q ss_pred cCCCEEEeCCCCCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008476 361 KGADGILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (564)
Q Consensus 361 ~~~DGIllpGGfG~r----~~eg~i~~ir~a~e~~iPiLGICLGmQll~ 405 (564)
.++|+|+||||.|.. ..+.....++.+.++++|+-+||-|-.+|+
T Consensus 104 ~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La 152 (247)
T 3n7t_A 104 HDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLP 152 (247)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred hhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHH
Confidence 468999999998752 235678889999999999999999998874
No 82
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=93.31 E-value=0.11 Score=58.49 Aligned_cols=96 Identities=13% Similarity=0.077 Sum_probs=62.5
Q ss_pred ceEEEEEec--cCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCC-C
Q 008476 297 PVRIAMVGK--YTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF-G 373 (564)
Q Consensus 297 ~~~IavVGk--Y~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGf-G 373 (564)
..||||+-. -+.-......++++|+.+|+.+.+ +... ..+ .++ ..|.+ -....+|+|+||||. |
T Consensus 529 g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~v------Vs~~-~g~-~vD---~t~~~--~~s~~fDAVvlPGG~~g 595 (688)
T 2iuf_A 529 GLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVV------VAER-XAN-NVD---ETYSA--SDAVQFDAVVVADGAEG 595 (688)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEE------EESS-CCT-TCC---EESTT--CCGGGCSEEEECTTCGG
T ss_pred CCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEE------Eecc-CCc-ccc---cchhc--CCccccCeEEecCCCcc
Confidence 468998832 111112466899999999999866 2221 110 100 01111 023478999999994 3
Q ss_pred ----------------C---CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008476 374 ----------------N---RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (564)
Q Consensus 374 ----------------~---r~~eg~i~~ir~a~e~~iPiLGICLGmQll~ 405 (564)
. +.....+..++.+.++++|+-.||-|-++|.
T Consensus 596 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~ 646 (688)
T 2iuf_A 596 LFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALE 646 (688)
T ss_dssp GCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHH
T ss_pred cccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHH
Confidence 1 1235688999999999999999999999885
No 83
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=93.20 E-value=0.036 Score=54.83 Aligned_cols=45 Identities=13% Similarity=0.049 Sum_probs=38.2
Q ss_pred cCCCEEEeCCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008476 361 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (564)
Q Consensus 361 ~~~DGIllpGGfG~----r~~eg~i~~ir~a~e~~iPiLGICLGmQll~ 405 (564)
.++|+|+||||.|. +..+.....++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La 145 (244)
T 3kkl_A 97 SDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFD 145 (244)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHH
Confidence 46899999999875 2336678889999999999999999998874
No 84
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=92.43 E-value=0.22 Score=56.56 Aligned_cols=102 Identities=16% Similarity=0.069 Sum_probs=62.9
Q ss_pred eEEEEEeccCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCCCcccc---cccCCchhhhHHHHh--ccCCCEEEeCCC
Q 008476 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDA---TEKENPDAYKAAWKL--LKGADGILVPGG 371 (564)
Q Consensus 298 ~~IavVGkY~~~~D-ay~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~---~~~~~p~~y~~~~~~--L~~~DGIllpGG 371 (564)
.||+|+ =+....+ ......++|+.+|+++.+ .......+... .+..+. .+ +. ...+|+|+||||
T Consensus 535 rkVaIL-l~dGfe~~El~~p~dvL~~AG~~V~i----vS~~gg~V~ss~G~~v~~d~-~l----~~v~~~~yDaViVPGG 604 (715)
T 1sy7_A 535 RRVAII-IADGYDNVAYDAAYAAISANQAIPLV----IGPRRSKVTAANGSTVQPHH-HL----EGFRSTMVDAIFIPGG 604 (715)
T ss_dssp CEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEE----EESCSSCEEBTTSCEECCSE-ET----TTCCGGGSSEEEECCC
T ss_pred CEEEEE-EcCCCCHHHHHHHHHHHHhcCCEEEE----EECCCCceecCCCceEeccc-cc----ccCCcccCCEEEEcCC
Confidence 589998 4544432 245788999999977654 11111111100 000000 00 11 246899999998
Q ss_pred CCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhc
Q 008476 372 FGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFA 409 (564)
Q Consensus 372 fG~r----~~eg~i~~ir~a~e~~iPiLGICLGmQll~ia~g 409 (564)
.+.. .....+..++.+.++++|+.+||-|-.+|+-++|
T Consensus 605 ~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~AlG 646 (715)
T 1sy7_A 605 AKAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKAIA 646 (715)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHHC
T ss_pred cccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHccC
Confidence 5322 1245788899999999999999999999975534
No 85
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=92.16 E-value=0.19 Score=50.14 Aligned_cols=43 Identities=33% Similarity=0.451 Sum_probs=39.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (564)
+|.|.|+ | -.|.||=.+|+.|+..|..+|+||-++.+||.-|.
T Consensus 41 ~~vI~v~-~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~~~~ 83 (307)
T 3end_A 41 AKVFAVY-G-KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDS 83 (307)
T ss_dssp CEEEEEE-C-STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCT
T ss_pred ceEEEEE-C-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCCCH
Confidence 5789999 7 99999999999999999999999999999996443
No 86
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=92.13 E-value=0.16 Score=48.03 Aligned_cols=102 Identities=15% Similarity=0.093 Sum_probs=54.7
Q ss_pred eEEEEEeccCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCC---ccc-cc--ccCC--chhhhHHHHhccCCCEEEe
Q 008476 298 VRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACD---LED-AT--EKEN--PDAYKAAWKLLKGADGILV 368 (564)
Q Consensus 298 ~~IavVGkY~~~~Da-y~SIi~aL~~aG~~v~v~v~i~wi~s~~---le~-~~--~~~~--p~~y~~~~~~L~~~DGIll 368 (564)
.||+++ =+..+.+. ....++.|+++|+++.+. .+.... +.. .. ...+ .+.........+++|.|+|
T Consensus 5 ~kV~il-l~dGfe~~E~~~p~~vl~~ag~~v~~~----s~~~~~~~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lvv 79 (194)
T 4gdh_A 5 VKVCLF-VADGTDEIEFSAPWGIFKRAEIPIDSV----YVGENKDRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAII 79 (194)
T ss_dssp CCEEEE-EETTCCHHHHHHHHHHHHHTTCCEEEE----EESSCTTCEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEEE
T ss_pred CEEEEE-ECCCcCHHHHHHHHHHHHHCCCeEEEE----EEcCCCCceEecCCCceeeccccHhhCCccccccccCCEEEE
Confidence 467777 45444433 346788899999887542 121111 000 00 0000 0000001122456899999
Q ss_pred CCCCCCC----chhHHHHHHHHHHH-cCCCEEEEehhHHHH
Q 008476 369 PGGFGNR----GVQGKILAAKYARE-HRIPYLGICLGMQVA 404 (564)
Q Consensus 369 pGGfG~r----~~eg~i~~ir~a~e-~~iPiLGICLGmQll 404 (564)
|||.+.. ..+..++.++.+.+ .++|+-.||-|..++
T Consensus 80 PGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~l~ 120 (194)
T 4gdh_A 80 PGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTA 120 (194)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGHHH
T ss_pred CCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccccch
Confidence 9995432 22456677777644 478999999997443
No 87
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=92.09 E-value=0.052 Score=55.00 Aligned_cols=46 Identities=26% Similarity=0.385 Sum_probs=38.6
Q ss_pred ccCCCEEEeCCCCCCC-c---hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 008476 360 LKGADGILVPGGFGNR-G---VQGKILAAKYAREHRIPYLGICLGMQVAV 405 (564)
Q Consensus 360 L~~~DGIllpGGfG~r-~---~eg~i~~ir~a~e~~iPiLGICLGmQll~ 405 (564)
..++|+||||||.|.. . .+...+.++.+.++++|+.+||-|-.+|+
T Consensus 143 ~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La 192 (291)
T 1n57_A 143 DSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFL 192 (291)
T ss_dssp TCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred cccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHH
Confidence 4689999999998764 2 25678899999999999999999998764
No 88
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=91.47 E-value=0.092 Score=52.13 Aligned_cols=102 Identities=14% Similarity=0.121 Sum_probs=59.8
Q ss_pred ceEEEEEeccCCCcch-HHHHHHHH-HHcCCcceeeeEEEEecCCCcccc-cccCCchhhhHHHHhc-cCCCEEEeCCCC
Q 008476 297 PVRIAMVGKYTGLSDA-YLSILKAL-LHASVDLRKKLVIDWIPACDLEDA-TEKENPDAYKAAWKLL-KGADGILVPGGF 372 (564)
Q Consensus 297 ~~~IavVGkY~~~~Da-y~SIi~aL-~~aG~~v~v~v~i~wi~s~~le~~-~~~~~p~~y~~~~~~L-~~~DGIllpGGf 372 (564)
..+|+++ =|..+.+. ....++.| +..++++. +...+...+... ...-.++. ..+.. ..+|.|+||||.
T Consensus 23 ~~~I~il-l~~gf~~~e~~~p~dvl~~~~~~~v~----~vs~~~~~V~~~~G~~i~~d~---~l~~~~~~yD~liVPGG~ 94 (253)
T 3ewn_A 23 DEQIAML-VYPGMTVMDLVGPHCMFGSLMGAKIY----IVAKSLDPVTSDAGLAIVPTA---TFGTCPRDLTVLFAPGGT 94 (253)
T ss_dssp CCEEEEE-CCTTBCHHHHHHHHHHHTTSTTCEEE----EEESSSSCEECTTSCEECCSE---ETTTSCSSCSEEEECCBS
T ss_pred CeEEEEE-eCCCCcHHHHHHHHHHHHhCCCCEEE----EEeCCCCeEEcCCCCEEeCCc---CHHHcCCCCCEEEECCCc
Confidence 3689988 56555432 44677777 44555443 223222111110 00000000 00122 356999999998
Q ss_pred -CCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 008476 373 -GNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (564)
Q Consensus 373 -G~r---~~eg~i~~ir~a~e~~iPiLGICLGmQll~i 406 (564)
|.. ..+..+..++.+.++++++.+||-|-.+|+-
T Consensus 95 ~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa~ 132 (253)
T 3ewn_A 95 DGTLAAASDAETLAFMADRGARAKYITSVCSGSLILGA 132 (253)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHH
T ss_pred cchhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHHH
Confidence 643 2356788899999999999999999988853
No 89
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=91.14 E-value=1.8 Score=46.22 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
+.|.++| .+|-||=.+++.|+.+|+.+|.+|.++..|+|-
T Consensus 99 ~vi~i~G--~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r 138 (425)
T 2ffh_A 99 NLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (425)
T ss_dssp EEEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEEEECCSSC
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEeeccccC
Confidence 4677775 399999999999999999999999999999873
No 90
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=90.52 E-value=1.7 Score=44.88 Aligned_cols=44 Identities=20% Similarity=0.302 Sum_probs=39.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (564)
+|.|.|++| -.|.||=.+|+.++..|..+|+||-++-+||+-|+
T Consensus 143 ~kvIav~s~-KGGvGKTT~a~nLA~~La~~g~rVlliD~D~~~~l 186 (373)
T 3fkq_A 143 SSVVIFTSP-CGGVGTSTVAAACAIAHANMGKKVFYLNIEQCGTT 186 (373)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHHTCCEEEEECCTTCCH
T ss_pred ceEEEEECC-CCCChHHHHHHHHHHHHHhCCCCEEEEECCCCCCH
Confidence 578889887 68999999999999999999999999999976554
No 91
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=90.36 E-value=0.35 Score=46.44 Aligned_cols=40 Identities=25% Similarity=0.420 Sum_probs=37.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
+|.|.|+++ -.|.||=.+|+.++..|..+|++|-++.+||
T Consensus 2 ~~vi~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSG-KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 478888886 5899999999999999999999999999999
No 92
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=90.23 E-value=0.38 Score=45.64 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=37.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
+|.|.|+++ -.|.||=.+|+.++..|..+|+||-++.+||.
T Consensus 2 ~~~i~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 2 GRIISIVSG-KGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ceEEEEecC-CCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 488889885 57999999999999999999999999999994
No 93
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=89.76 E-value=0.26 Score=54.26 Aligned_cols=42 Identities=29% Similarity=0.385 Sum_probs=34.0
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 008476 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (564)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (564)
-|++++| -.|.||-.+|++++..|..+|.+|-++-.||.-|.
T Consensus 328 ~~~~~~~-~~g~Gktt~a~~lA~~l~~~g~~vllvD~Dp~~~l 369 (589)
T 1ihu_A 328 GLIMLMG-KGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHL 369 (589)
T ss_dssp EEEEEEC-STTSSHHHHHHHHHHHHHHTTCCEEEEESCCC---
T ss_pred eEEEEec-CCCCChhhHHHHHHHHHHHCCCcEEEEeCCCcccH
Confidence 3455544 57899999999999999999999999999997554
No 94
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=89.31 E-value=0.46 Score=44.34 Aligned_cols=44 Identities=25% Similarity=0.250 Sum_probs=36.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy-ln~d 46 (564)
++.|.++| -||-||-.....|-..|+.+|++|..+|.||- .++|
T Consensus 6 ~~~i~i~G--~sGsGKTTl~~~l~~~l~~~g~~v~~i~~~~~~~~id 50 (174)
T 1np6_A 6 IPLLAFAA--WSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVD 50 (174)
T ss_dssp CCEEEEEC--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-----
T ss_pred ceEEEEEe--CCCCCHHHHHHHHHHhccccCCceeEEeeCCCccccC
Confidence 36788888 79999999999999999999999999999983 3555
No 95
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=88.28 E-value=0.54 Score=45.75 Aligned_cols=42 Identities=24% Similarity=0.305 Sum_probs=37.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (564)
+|.|.|+++ -.|.||=.+|+.++..|. +|+||-++.+||.-|
T Consensus 27 ~~vI~v~s~-kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~~ 68 (267)
T 3k9g_A 27 PKIITIASI-KGGVGKSTSAIILATLLS-KNNKVLLIDMDTQAS 68 (267)
T ss_dssp CEEEEECCS-SSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTCH
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHH-CCCCEEEEECCCCCC
Confidence 467788776 589999999999999999 999999999999754
No 96
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=87.47 E-value=0.75 Score=46.88 Aligned_cols=44 Identities=32% Similarity=0.440 Sum_probs=39.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTD 46 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d 46 (564)
+|.|-|+| =-|+||=.||+.|+..|..+|+||-++=+||+.|.-
T Consensus 48 aKVIAIaG--KGGVGKTTtavNLA~aLA~~GkkVllID~Dpq~~s~ 91 (314)
T 3fwy_A 48 AKVFAVYG--KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDST 91 (314)
T ss_dssp CEEEEEEC--STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCTT
T ss_pred ceEEEEEC--CCccCHHHHHHHHHHHHHHCCCeEEEEecCCCCccc
Confidence 58899995 668999999999999999999999999999987743
No 97
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=86.71 E-value=0.82 Score=45.12 Aligned_cols=42 Identities=26% Similarity=0.449 Sum_probs=38.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (564)
||-|.|+ | =-|.||=.+|+.|+..|..+|+||-++-+||.-|
T Consensus 2 MkvIavs-~-KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q~~ 43 (289)
T 2afh_E 2 MRQCAIY-G-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKAD 43 (289)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSSC
T ss_pred ceEEEEe-C-CCcCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 7888886 5 8899999999999999999999999999999754
No 98
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=86.47 E-value=0.81 Score=44.35 Aligned_cols=42 Identities=29% Similarity=0.470 Sum_probs=38.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (564)
||-|.|+ | =-|.||=.+|+.|+..|..+|+||-++-+||.-|
T Consensus 1 M~vI~vs-~-KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q~~ 42 (269)
T 1cp2_A 1 MRQVAIY-G-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKAD 42 (269)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTSC
T ss_pred CcEEEEe-c-CCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCCCC
Confidence 7888886 5 8899999999999999999999999999999654
No 99
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=86.04 E-value=0.6 Score=47.43 Aligned_cols=41 Identities=22% Similarity=0.426 Sum_probs=37.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
||-|+||+| -.|.||=.+|++++..|..+|.||-++-.||-
T Consensus 13 m~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 13 KTTFVFIGG-KGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp BCEEEEEEE-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 467777877 78999999999999999999999999999983
No 100
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=84.63 E-value=0.9 Score=44.06 Aligned_cols=43 Identities=28% Similarity=0.444 Sum_probs=37.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (564)
||.|.|+++ -.|.||=.+|+.|+..|..+|+||-++.+||.-|
T Consensus 6 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~~~ 48 (257)
T 1wcv_1 6 VRRIALANQ-KGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGN 48 (257)
T ss_dssp CCEEEECCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CEEEEEEeC-CCCchHHHHHHHHHHHHHHCCCCEEEEECCCCcC
Confidence 467888864 5789999999999999999999999999999644
No 101
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=84.17 E-value=0.63 Score=46.98 Aligned_cols=72 Identities=26% Similarity=0.233 Sum_probs=50.4
Q ss_pred ceEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCc
Q 008476 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (564)
Q Consensus 297 ~~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~ 376 (564)
.+||+++++...- ...+.+.|+..|+++.+ +.+.- +.+.++|.||+-||-|.
T Consensus 29 ~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~-------~~~~~----------------~~~~~~DlvIvlGGDGT-- 80 (278)
T 1z0s_A 29 GMRAAVVYKTDGH---VKRIEEALKRLEVEVEL-------FNQPS----------------EELENFDFIVSVGGDGT-- 80 (278)
T ss_dssp -CEEEEEESSSTT---HHHHHHHHHHTTCEEEE-------ESSCC----------------GGGGGSSEEEEEECHHH--
T ss_pred ceEEEEEeCCcHH---HHHHHHHHHHCCCEEEE-------ccccc----------------cccCCCCEEEEECCCHH--
Confidence 5789999876532 56789999999988743 11110 23568899999997442
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehh
Q 008476 377 VQGKILAAKYAREHRIPYLGICLG 400 (564)
Q Consensus 377 ~eg~i~~ir~a~e~~iPiLGICLG 400 (564)
++.+++++... +|++||=+|
T Consensus 81 ---~L~aa~~~~~~-~PilGIN~G 100 (278)
T 1z0s_A 81 ---ILRILQKLKRC-PPIFGINTG 100 (278)
T ss_dssp ---HHHHHTTCSSC-CCEEEEECS
T ss_pred ---HHHHHHHhCCC-CcEEEECCC
Confidence 45667666555 999999887
No 102
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=84.00 E-value=1.2 Score=41.79 Aligned_cols=40 Identities=30% Similarity=0.355 Sum_probs=34.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
+|-|+||++ =.|.||=.+|+.|+..|..+|+||-. +||-.
T Consensus 1 ~k~I~v~s~-kgGvGKTt~a~nLa~~la~~G~rVll--~dp~~ 40 (224)
T 1byi_A 1 SKRYFVTGT-DTEVGKTVASCALLQAAKAAGYRTAG--YKPVA 40 (224)
T ss_dssp CEEEEEEES-STTSCHHHHHHHHHHHHHHTTCCEEE--ECSEE
T ss_pred CceEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEE--Eccee
Confidence 478899875 57899999999999999999999998 57744
No 103
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=83.18 E-value=1.1 Score=45.99 Aligned_cols=41 Identities=32% Similarity=0.536 Sum_probs=36.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
+|-|+||+| -.|.||=.+|++++..|..+|+||-++-.||-
T Consensus 25 ~~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGG-KGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEEC-SSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 456777777 78999999999999999999999999999984
No 104
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=82.44 E-value=0.31 Score=47.75 Aligned_cols=101 Identities=16% Similarity=0.115 Sum_probs=53.1
Q ss_pred ceEEEEEeccCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCCcccc-cccCCchhhhHHHHhccCCCEEEeCCC-CC
Q 008476 297 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDA-TEKENPDAYKAAWKLLKGADGILVPGG-FG 373 (564)
Q Consensus 297 ~~~IavVGkY~~~~Da-y~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~-~~~~~p~~y~~~~~~L~~~DGIllpGG-fG 373 (564)
..||+++ =|..+.+. .....+.|+.++.. ..+.+.- +...+... ...-.++ ...+....+|.|+|||| +|
T Consensus 20 ~~kV~il-l~dGf~~~e~~~p~dvl~~~~~~--~~v~~vs-~~~~V~ss~G~~v~~d---~~l~~~~~~D~liVPGG~~g 92 (236)
T 3bhn_A 20 MYKVGIV-LFDDFTDVDFFLMNDLLGRTSDS--WTVRILG-TKPEHHSQLGMTVKTD---GHVSEVKEQDVVLITSGYRG 92 (236)
T ss_dssp CEEEEEE-CCTTBCHHHHHHHHHHHTTCSSS--EEEEEEE-SSSEEEBTTCCEEECS---EEGGGGGGCSEEEECCCTTH
T ss_pred CCEEEEE-eCCCChHHHHHHHHHHHHcCCCC--EEEEEEE-CCCcEEecCCcEEecC---cccccccCCCEEEEcCCccC
Confidence 4678888 56544432 44677888775521 1122222 11111100 0000000 00123567899999999 56
Q ss_pred CCc---hhHHHHHHHHHHHcCC-CEEEEehhHHHHHH
Q 008476 374 NRG---VQGKILAAKYAREHRI-PYLGICLGMQVAVI 406 (564)
Q Consensus 374 ~r~---~eg~i~~ir~a~e~~i-PiLGICLGmQll~i 406 (564)
.+. .+..+..+ ..+++. ++.+||-|-.+|+-
T Consensus 93 ~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~ 127 (236)
T 3bhn_A 93 IPAALQDENFMSAL--KLDPSRQLIGSICAGSFVLHE 127 (236)
T ss_dssp HHHHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHHH
T ss_pred HhhhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHHH
Confidence 532 23345555 333455 99999999998863
No 105
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=82.39 E-value=1.3 Score=45.77 Aligned_cols=45 Identities=22% Similarity=0.366 Sum_probs=40.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTD 46 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d 46 (564)
||.|.|+++ --|.||=.+|+.+|..|..+|+||-++-+||.-|.-
T Consensus 1 MkvIav~s~-KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q~~~~ 45 (361)
T 3pg5_A 1 MRTISFFNN-KGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNAT 45 (361)
T ss_dssp CEEEEBCCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCTTH
T ss_pred CeEEEEEcC-CCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCCCChh
Confidence 788999877 789999999999999999999999999999986643
No 106
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=81.48 E-value=1.1 Score=40.57 Aligned_cols=36 Identities=31% Similarity=0.458 Sum_probs=32.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|++|+++|. +|-||...+..|...|...|+++..+-
T Consensus 1 M~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~~~ 36 (194)
T 1nks_A 1 MKIGIVTGI--PGVGKSTVLAKVKEILDNQGINNKIIN 36 (194)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHHHhcCceEEEEE
Confidence 789999995 899999999999999999999887763
No 107
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=80.97 E-value=9.6 Score=38.08 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
+.|.++| .+|.||=.+++.|+.+++..|.+|.++-.|++-
T Consensus 99 ~~i~i~g--~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~~~ 138 (295)
T 1ls1_A 99 NLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (295)
T ss_dssp EEEEEEC--CTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEecCCccc
Confidence 5678885 499999999999999999999999999999874
No 108
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=79.44 E-value=1.7 Score=42.84 Aligned_cols=42 Identities=19% Similarity=0.266 Sum_probs=35.9
Q ss_pred EEEEeCC-ccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 008476 3 YVLVTGG-VVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (564)
Q Consensus 3 ~i~vtgg-v~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (564)
-|.|++. .-.|.||=.+|+.|+..|..+|+||-++.+||.-|
T Consensus 36 ~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlliD~D~q~~ 78 (298)
T 2oze_A 36 AIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQAT 78 (298)
T ss_dssp CEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH
T ss_pred EEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 4555553 56789999999999999999999999999999865
No 109
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=78.53 E-value=1.9 Score=44.24 Aligned_cols=40 Identities=28% Similarity=0.486 Sum_probs=34.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
|++|++| -.|.||=.+|++++..|..+|.||-++-.||--
T Consensus 17 ~i~~~sg--kGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 17 RWIFVGG--KGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp CEEEEEC--STTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred EEEEEeC--CCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 5665554 789999999999999999999999999999743
No 110
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=78.34 E-value=2.2 Score=42.81 Aligned_cols=41 Identities=20% Similarity=0.339 Sum_probs=36.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
+|-|+|||. -.|.||=.+|+.|+..|..+|.||-++..||.
T Consensus 104 ~kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r 144 (299)
T 3cio_A 104 NNILMITGA-TPDSGKTFVSSTLAAVIAQSDQKVLFIDADLR 144 (299)
T ss_dssp CCEEEEEES-SSSSCHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEECC-CCCCChHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 367888874 47999999999999999999999999999983
No 111
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=78.16 E-value=2 Score=44.41 Aligned_cols=40 Identities=35% Similarity=0.531 Sum_probs=36.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~--~~g~~v~~~k~dpy 42 (564)
+|++|++| -.|.||=.+|++++..|. .+|.||-++-.||-
T Consensus 18 ~~i~~~~g--kGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 18 LKWIFVGG--KGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp CSEEEEEC--STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 36788877 889999999999999999 99999999999985
No 112
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=77.64 E-value=19 Score=37.24 Aligned_cols=150 Identities=17% Similarity=0.144 Sum_probs=92.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~ 80 (564)
+|-|||||= =+++||=.++..|-+.|+.+|+++..+|- -|-|..- ...|-..|-
T Consensus 152 ~k~i~v~GT-D~~VGK~~ts~~L~~~l~~~G~~a~~~~t-------------gqtg~~~-~~~gi~~Da----------- 205 (349)
T 2obn_A 152 CRRVLTVGT-DMAIGKMSTSLELHWAAKLRGWRSKFLAT-------------GQTGVML-EGDGVALDA----------- 205 (349)
T ss_dssp SEEEEEEES-SSSSSHHHHHHHHHHHHHHTTCCEEEECC-------------SHHHHHH-HSCSCCGGG-----------
T ss_pred ceEEEEcCC-CccccceeHHHHHHHHHHhcCCcEEEEec-------------cchhhhh-hcCCcchhH-----------
Confidence 367899986 67799999999999999999999988542 2333211 111112221
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccc-ccCcchH
Q 008476 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIG-DIESMPF 159 (564)
Q Consensus 81 ~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvg-dies~pf 159 (564)
-.....+| ++.+.+.++ .+++|+++||==|-+- =+ +.-.
T Consensus 206 ---v~~df~aG----------------------------~ve~~~~~~--------~~~~d~vlVEGqGgl~~P~-~~~t 245 (349)
T 2obn_A 206 ---VRVDFAAG----------------------------AVEQMVMRY--------GKNYDILHIEGQGSLLHPG-STAT 245 (349)
T ss_dssp ---SBHHHHHH----------------------------HHHHHHHHH--------TTTCSEEEECCCCCTTSTT-CCTH
T ss_pred ---HHHHHHhh----------------------------hHHHHHHHh--------ccCCCEEEEeCCCcccCcC-hHhH
Confidence 00111122 333344444 2368999999655443 22 2223
Q ss_pred HHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhh--------CCCcccEEEEeeCC
Q 008476 160 IEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRG--------QGLTPNILACRSTV 220 (564)
Q Consensus 160 ~ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s--------~Gi~pd~lv~R~~~ 220 (564)
+ .+-+.....-++.+|-.=...+..--+.+--|-+|.+...+. .|+++-++++-...
T Consensus 246 ~----~ll~g~~p~~vILv~~~~~g~i~~~~~~~~p~l~~~i~t~e~l~~~~~~~~~~~V~Gi~lN~~~ 310 (349)
T 2obn_A 246 L----PLIRGSQPTQLVLVHRAGQTHNGNNPHVPIPPLPEVIRLYETVASGGGAFGTVPVVGIALNTAH 310 (349)
T ss_dssp H----HHHHHHCCSEEEEEEETTCCBCSSCTTSBCCCHHHHHHHHHHHHHTTTTSCCCCEEEEEEECTT
T ss_pred H----HHHHHcCCCeEEEEECCCCceECCCCccCCCCHHHHHHHHHHHHHhhccCCCCcEEEEEEECCC
Confidence 3 333444555699999876677755556666677777765554 68999999886644
No 113
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=77.54 E-value=1.8 Score=43.97 Aligned_cols=41 Identities=27% Similarity=0.386 Sum_probs=35.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
|-|+||+| --|.||=.+|+.++..|..+|+||-++-.||.-
T Consensus 19 ~~i~v~sg-kGGvGKTTva~~LA~~lA~~G~rVllvD~D~~~ 59 (329)
T 2woo_A 19 LKWIFVGG-KGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAH 59 (329)
T ss_dssp CCEEEEEC-SSSSSHHHHHHHHHHHHHTSSSCEEEEECCTTC
T ss_pred CEEEEEeC-CCCCcHHHHHHHHHHHHHHCCCeEEEEECCCCc
Confidence 34666666 689999999999999999999999999999953
No 114
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=77.54 E-value=2.2 Score=46.80 Aligned_cols=39 Identities=31% Similarity=0.529 Sum_probs=35.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
|++|++|- .|.||=.+|++++..|..+|.||-++-.||-
T Consensus 9 ~i~~~sgk--GGvGKTT~a~~lA~~lA~~G~rVLlvd~D~~ 47 (589)
T 1ihu_A 9 PYLFFTGK--GGVGKTSISCATAIRLAEQGKRVLLVSTDPA 47 (589)
T ss_dssp SEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEEeCC--CcCHHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 67777764 9999999999999999999999999999983
No 115
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=77.35 E-value=2.8 Score=41.43 Aligned_cols=41 Identities=20% Similarity=0.352 Sum_probs=36.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
+|-|+||+. -.|.||=.+|+.|+..|..+|.||-++-.||.
T Consensus 82 ~kvI~vts~-kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 82 VQSIVITSE-APGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 467888875 56899999999999999999999999999964
No 116
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=77.15 E-value=1.6 Score=45.14 Aligned_cols=42 Identities=26% Similarity=0.401 Sum_probs=36.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPYLN 44 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~--~~g~~v~~~k~dpyln 44 (564)
|-|.||+| --|.||=.+|++++..|. .+|.||-++..||--|
T Consensus 18 ~~i~v~sg-KGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~~~ 61 (354)
T 2woj_A 18 HKWIFVGG-KGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPAHN 61 (354)
T ss_dssp CCEEEEEE-STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCC
T ss_pred cEEEEEeC-CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCCC
Confidence 34666666 789999999999999999 9999999999998533
No 117
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=76.73 E-value=2.4 Score=41.51 Aligned_cols=34 Identities=41% Similarity=0.654 Sum_probs=28.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|| |+||||- |-+.+.|-+.|.++|++|+.+--+|
T Consensus 1 Mk-ILVTGat------GfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MR-VLVGGGT------GFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CE-EEEECCC------CHHHHHHHHHHHHCCCEEEEEECCC
Confidence 78 9999964 7888999999999999999985543
No 118
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=76.61 E-value=2.3 Score=44.43 Aligned_cols=95 Identities=14% Similarity=0.151 Sum_probs=55.4
Q ss_pred eEEEEEeccCCC--cchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCch---h---h-hHHHHhccCCCEEEe
Q 008476 298 VRIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPD---A---Y-KAAWKLLKGADGILV 368 (564)
Q Consensus 298 ~~IavVGkY~~~--~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~---~---y-~~~~~~L~~~DGIll 368 (564)
.+|+||+|+.+- ......+.++|...|+.+.+. -. -++++.......-+. . + ....+.-+.+|-||.
T Consensus 39 k~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~ve--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlvI~ 114 (365)
T 3pfn_A 39 KSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVE--KK--VLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIIC 114 (365)
T ss_dssp CEEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEEE--HH--HHHSHHHHHCSTTHHHHHHCEEECTTTCCCTTTCSEEEE
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEEe--hH--HhhhhccccccccccccccccccccChhhcccCCCEEEE
Confidence 489999998643 345678999999998766431 00 001100000000000 0 0 000012357899999
Q ss_pred CCCCCCCchhHHHHHHHHHHHcCCCEEEEehhH
Q 008476 369 PGGFGNRGVQGKILAAKYAREHRIPYLGICLGM 401 (564)
Q Consensus 369 pGGfG~r~~eg~i~~ir~a~e~~iPiLGICLGm 401 (564)
-||-|. .+.+++++...++|++||=+|.
T Consensus 115 lGGDGT-----~L~aa~~~~~~~~PvlGiN~G~ 142 (365)
T 3pfn_A 115 LGGDGT-----LLYASSLFQGSVPPVMAFHLGS 142 (365)
T ss_dssp ESSTTH-----HHHHHHHCSSSCCCEEEEESSS
T ss_pred EcChHH-----HHHHHHHhccCCCCEEEEcCCC
Confidence 998663 6677777767789999998873
No 119
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=75.65 E-value=2.8 Score=39.48 Aligned_cols=40 Identities=28% Similarity=0.290 Sum_probs=34.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
|.|.|+++ =.|.||=.+|+.|+..|..+| +|.++.+||.-
T Consensus 1 kvI~v~s~-KGGvGKTT~a~~LA~~la~~g-~VlliD~D~q~ 40 (209)
T 3cwq_A 1 MIITVASF-KGGVGKTTTAVHLSAYLALQG-ETLLIDGDPNR 40 (209)
T ss_dssp CEEEEEES-STTSSHHHHHHHHHHHHHTTS-CEEEEEECTTC
T ss_pred CEEEEEcC-CCCCcHHHHHHHHHHHHHhcC-CEEEEECCCCC
Confidence 34666643 578999999999999999999 99999999964
No 120
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=74.29 E-value=3.7 Score=37.28 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=28.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
++|.+||+ +|-||+..+.-|...|+.+|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~v~~ 33 (197)
T 2z0h_A 1 MFITFEGI--DGSGKSTQIQLLAQYLEKRGKKVIL 33 (197)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHCCC-EEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 37999997 6889999999999999999998753
No 121
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=72.39 E-value=1.9 Score=40.79 Aligned_cols=34 Identities=29% Similarity=0.400 Sum_probs=24.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
||-++||||- +|||+.++ +.|.++|++|.+.=.+
T Consensus 1 Mk~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGAS-SGLGAELA-----KLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTT-SHHHHHHH-----HHHHHTTCCEEEEESC
T ss_pred CCEEEEecCC-chHHHHHH-----HHHHHCCCEEEEEeCC
Confidence 7889999996 78887654 5677889998876443
No 122
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=70.97 E-value=1.7 Score=40.19 Aligned_cols=36 Identities=22% Similarity=0.415 Sum_probs=31.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
++|.|+| .||-||...+..|...|..+|++|..++-
T Consensus 1 ~~I~i~G--~~GsGKsTl~~~L~~~l~~~g~~v~~~~~ 36 (214)
T 1gtv_A 1 MLIAIEG--VDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (214)
T ss_dssp CEEEEEE--EEEEEHHHHHHHHHHHHHEEEEEEEEEES
T ss_pred CEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEee
Confidence 4788888 68999999999999999999999987763
No 123
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=70.15 E-value=3.2 Score=38.37 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=34.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
|+.|.|+| -||-||=..+..|..+++.+|+++-.+|+|+.
T Consensus 2 ~~~v~IvG--~SGsGKSTL~~~L~~~~~~~g~~~G~I~~dg~ 41 (171)
T 2f1r_A 2 SLILSIVG--TSDSGKTTLITRMMPILRERGLRVAVVKRHAH 41 (171)
T ss_dssp -CEEEEEE--SCHHHHHHHHHHHHHHHHHTTCCEEEEEC---
T ss_pred ceEEEEEC--CCCCCHHHHHHHHHHHhhhcCCceEEEEEcCc
Confidence 47788999 79999999999999999999999999999874
No 124
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=69.45 E-value=6.1 Score=40.18 Aligned_cols=39 Identities=21% Similarity=0.414 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
+.|.|+| . +|.||=.+++.|+.+|+..|.+|.++-.|+|
T Consensus 106 ~vI~ivG-~-~G~GKTT~~~~LA~~l~~~g~kVllid~D~~ 144 (320)
T 1zu4_A 106 NIFMLVG-V-NGTGKTTSLAKMANYYAELGYKVLIAAADTF 144 (320)
T ss_dssp EEEEEES-S-TTSSHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5788887 4 9999999999999999999999999999976
No 125
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=68.33 E-value=2.8 Score=44.61 Aligned_cols=40 Identities=30% Similarity=0.476 Sum_probs=36.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
+.|.++|- .|.||=.+++.|+..|+.+|++|.++-.|||-
T Consensus 100 ~vI~ivG~--~GvGKTTla~~La~~l~~~G~kVllv~~D~~r 139 (432)
T 2v3c_C 100 NVILLVGI--QGSGKTTTAAKLARYIQKRGLKPALIAADTYR 139 (432)
T ss_dssp CCEEEECC--SSSSTTHHHHHHHHHHHHHHCCEEEECCSCCC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEeccccC
Confidence 36788883 89999999999999999999999999999984
No 126
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=67.60 E-value=5.4 Score=39.83 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=35.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
|.|.||++ -.|.||=.+|+.|+..|...|.||-+|-.||.
T Consensus 93 kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 93 NVLMMTGV-SPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CEEEEEES-SSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred eEEEEECC-CCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 67888875 46899999999999999999999999999985
No 127
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=67.53 E-value=5 Score=40.50 Aligned_cols=94 Identities=26% Similarity=0.259 Sum_probs=48.7
Q ss_pred eEEEEEeccCCC--cchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccC--------CchhhhHHHHhccCCCEEE
Q 008476 298 VRIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKE--------NPDAYKAAWKLLKGADGIL 367 (564)
Q Consensus 298 ~~IavVGkY~~~--~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~--------~p~~y~~~~~~L~~~DGIl 367 (564)
.||+++.+.... ......+.+.|+..|+++.+. ...++++.+..... +...+........++|.||
T Consensus 5 ~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi 80 (307)
T 1u0t_A 5 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVL----SAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVL 80 (307)
T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEE----C-----------------------------------CCCEE
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEe----cchhhhhhcccccccccccccccccccccccccccCCCEEE
Confidence 379999876542 223557888899999876442 11111110000000 0000000001345789999
Q ss_pred eCCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 008476 368 VPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (564)
Q Consensus 368 lpGGfG~r~~eg~i~~ir~a~e~~iPiLGICLG 400 (564)
+-||-|. ...+++.+...++|++||=+|
T Consensus 81 ~~GGDGT-----~l~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 81 VLGGDGT-----FLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp EEECHHH-----HHHHHHHHHHHTCCEEEEECS
T ss_pred EEeCCHH-----HHHHHHHhccCCCCEEEEeCC
Confidence 9997442 566777777778999999766
No 128
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=65.24 E-value=4.5 Score=38.49 Aligned_cols=34 Identities=26% Similarity=0.571 Sum_probs=25.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
||-|+||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 1 mk~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGCA-TGIGAAT-----RKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 7889999984 6777654 45677789999886443
No 129
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=65.23 E-value=8.2 Score=39.03 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=36.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
+.|.++|- +|-||=.+++.|+.+|+..|.+|.++-.|+|-
T Consensus 105 ~vi~ivG~--~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~r 144 (306)
T 1vma_A 105 FVIMVVGV--NGTGKTTSCGKLAKMFVDEGKSVVLAAADTFR 144 (306)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECTTC
T ss_pred eEEEEEcC--CCChHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 57889983 99999999999999999999999999999863
No 130
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=64.43 E-value=6 Score=35.59 Aligned_cols=33 Identities=27% Similarity=0.272 Sum_probs=27.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
+.|++||+ +|-||...+.-|...|.+.|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~~i~ 33 (195)
T 2pbr_A 1 MLIAFEGI--DGSGKTTQAKKLYEYLKQKGYFVSL 33 (195)
T ss_dssp CEEEEECS--TTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 46899998 6779999999999999888987653
No 131
>2oyn_A Hypothetical protein MJ0056; structural genomics, unknown function, PSI-2, protein structure initiative; HET: CDP; 1.85A {Methanocaldococcus jannaschii DSM2661} SCOP: b.43.5.2 PDB: 2p3m_A 2vbs_A 2vbt_A* 2vbu_A* 2vbv_A*
Probab=64.34 E-value=2.5 Score=38.64 Aligned_cols=31 Identities=39% Similarity=0.633 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHH----HHHHHHCCC
Q 008476 2 KYVLVTGGVVSGLGKGVTASSI----GVLLKACGL 32 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~----g~ll~~~g~ 32 (564)
|-+-++|=|+||+|+|----|+ -..++..||
T Consensus 5 ~~i~l~G~VvSGlGEG~~y~sl~~Y~~qf~~~LGF 39 (146)
T 2oyn_A 5 KLMIIEGEVVSGLGEGRYFLSLPPYKEIFKKILGF 39 (146)
T ss_dssp CEEEEEEEEECCSSHHHHHTTSHHHHHHHHHHHSS
T ss_pred eEEEEEEEEEccccceEEEEeCHHHHHHHHHHhCC
Confidence 5678999999999999888887 556677777
No 132
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=64.28 E-value=4.7 Score=38.76 Aligned_cols=31 Identities=29% Similarity=0.326 Sum_probs=24.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
||-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 1 Mk~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 1 MSTAIVTNVK-HFGGMGS-----ALRLSEAGHTVACH 31 (254)
T ss_dssp -CEEEESSTT-STTHHHH-----HHHHHHTTCEEEEC
T ss_pred CeEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 7889999996 8999864 45677789988765
No 133
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=64.19 E-value=4.7 Score=35.03 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=32.4
Q ss_pred hccCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 359 LLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 359 ~L~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++.+|.+|+.-|.-...-++....|+.|.+.++|++||
T Consensus 35 ~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV 73 (111)
T 1eiw_A 35 TPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITV 73 (111)
T ss_dssp CSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEE
T ss_pred ccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEE
Confidence 478999999888766655567777888999999999998
No 134
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=63.23 E-value=7.2 Score=39.14 Aligned_cols=39 Identities=26% Similarity=0.492 Sum_probs=34.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeeccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKIDPY 42 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~-~g~~v~~~k~dpy 42 (564)
+.|.++|- +|.||=.+++.|+.+|+. +|.+|.++-.|||
T Consensus 106 ~vi~lvG~--~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~ 145 (296)
T 2px0_A 106 KYIVLFGS--TGAGKTTTLAKLAAISMLEKHKKIAFITTDTY 145 (296)
T ss_dssp SEEEEEES--TTSSHHHHHHHHHHHHHHTTCCCEEEEECCCS
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHHHhcCCEEEEEecCcc
Confidence 35677774 799999999999999995 8999999999997
No 135
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=62.79 E-value=29 Score=33.05 Aligned_cols=90 Identities=13% Similarity=0.099 Sum_probs=45.1
Q ss_pred CceEEEEEeccCCCcch-HHHHHHHHHHcCCcc-eeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEeCCC
Q 008476 296 EPVRIAMVGKYTGLSDA-YLSILKALLHASVDL-RKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 371 (564)
Q Consensus 296 ~~~~IavVGkY~~~~Da-y~SIi~aL~~aG~~v-~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIllpGG 371 (564)
++.+||++-.... .+. |..+++.++.+..+. ...+.+.+...+.- +++...+..+.+ .++||||+.+.
T Consensus 7 ~~~~Igvi~~~~~-~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~-------~~~~~~~~i~~l~~~~vdgiii~~~ 78 (304)
T 3gbv_A 7 KKYTFACLLPKHL-EGEYWTDVQKGIREAVTTYSDFNISANITHYDPY-------DYNSFVATSQAVIEEQPDGVMFAPT 78 (304)
T ss_dssp CCEEEEEEEECCC-TTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSS-------CHHHHHHHHHHHHTTCCSEEEECCS
T ss_pred CcceEEEEecCCC-CchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCC-------CHHHHHHHHHHHHhcCCCEEEECCC
Confidence 4578997732210 223 445666555554433 33334444432211 111222222333 58999999874
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 372 FGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 372 fG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.. +.....++.+.+.++|+.-+
T Consensus 79 ~~----~~~~~~~~~~~~~~iPvV~~ 100 (304)
T 3gbv_A 79 VP----QYTKGFTDALNELGIPYIYI 100 (304)
T ss_dssp SG----GGTHHHHHHHHHHTCCEEEE
T ss_pred Ch----HHHHHHHHHHHHCCCeEEEE
Confidence 22 11234566677779998655
No 136
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=60.53 E-value=10 Score=39.05 Aligned_cols=43 Identities=21% Similarity=0.368 Sum_probs=36.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH------HCCCeeEEeeeccccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK------ACGLRVTCIKIDPYLN 44 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~------~~g~~v~~~k~dpyln 44 (564)
+|-|.|++|- -|.||=.+|+.++..|. .+|+||-++-+||.-|
T Consensus 108 ~~vIav~s~K-GGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D~q~~ 156 (398)
T 3ez2_A 108 AYVIFISNLK-GGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLDPQSS 156 (398)
T ss_dssp CEEEEECCSS-SSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEECTTCH
T ss_pred CeEEEEEeCC-CCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCC
Confidence 3667777654 78999999999999998 4799999999999654
No 137
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=59.64 E-value=11 Score=37.95 Aligned_cols=40 Identities=30% Similarity=0.502 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
+.|.++| .+|.||=.+++.|+.+|..+|.+|.++-.|||-
T Consensus 99 ~vi~i~G--~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 99 YVIMLVG--VQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEEEC--SSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4677776 499999999999999999999999999999974
No 138
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=59.11 E-value=24 Score=33.10 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=21.9
Q ss_pred cC-CCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KG-ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~-~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.+ +||||+.+.... . ....++.+.+.++|+.-+
T Consensus 57 ~~~vdgii~~~~~~~-~---~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 57 QAPPDALILAPNSAE-D---LTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp HSCCSEEEECCSSTT-T---THHHHHHHHHTTCCEEEE
T ss_pred hCCCCEEEEeCCCHH-H---HHHHHHHHHHCCCcEEEE
Confidence 46 999999873211 1 234566677789998765
No 139
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=58.36 E-value=12 Score=34.61 Aligned_cols=40 Identities=23% Similarity=0.293 Sum_probs=35.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
..|.|+|+ ||-||-..+..|..+|+..|.+|...-.|.+.
T Consensus 23 ~~i~i~G~--~GsGKstl~~~l~~~~~~~~~~v~~~~~d~~~ 62 (201)
T 1rz3_A 23 LVLGIDGL--SRSGKTTLANQLSQTLREQGISVCVFHMDDHI 62 (201)
T ss_dssp EEEEEEEC--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCeEEEeccCccc
Confidence 57889997 88899999999999999999999888888764
No 140
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=58.24 E-value=11 Score=40.21 Aligned_cols=57 Identities=18% Similarity=0.235 Sum_probs=39.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg 64 (564)
|.|-||| +=||+.|++=|+.+|++.|++.+. ++.--+| +.|...-.+..+++|.+=|
T Consensus 119 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 175 (475)
T 1p3d_A 119 HGIAVAG----THGKTTTTAMISMIYTQAKLDPTF-VNGGLVK-SAGKNAHLGASRYLIAEAD 175 (475)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCccc-ccccccccCCCCEEEEEec
Confidence 6788888 569999999999999999998543 3443334 3332111134578888876
No 141
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=58.21 E-value=22 Score=32.48 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=55.6
Q ss_pred eEEEEEeccCCC-cc--hHHHHHHHHHHcCCcceeeeEEEEecCCCcccccc---cCCchhhhHHHHhccCCCEEEeCCC
Q 008476 298 VRIAMVGKYTGL-SD--AYLSILKALLHASVDLRKKLVIDWIPACDLEDATE---KENPDAYKAAWKLLKGADGILVPGG 371 (564)
Q Consensus 298 ~~IavVGkY~~~-~D--ay~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~---~~~p~~y~~~~~~L~~~DGIllpGG 371 (564)
+||=+-|-.... +| .|..+.+.|+..| .+. . .|+..+++++... .....-|+.-.+.+..+|.||.-..
T Consensus 3 mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~Vl---~-~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 3 RSVYFCGSIRGGREDQALYARIVSRLRRYG-KVL---T-EHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT 77 (152)
T ss_dssp CEEEEECCSTTCCTTHHHHHHHHHHHTTTS-EEC---C-CC-------------CCCHHHHHHHHHHHHHHCSEEEEECS
T ss_pred ceEEEECCCCCcHHHHHHHHHHHHHHHHcC-ccc---c-cccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC
Confidence 467777766543 23 5779999999999 431 1 4555444432210 1112234444556789999987443
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 008476 372 FGNRGVQGKILAAKYAREHRIPYLGICL 399 (564)
Q Consensus 372 fG~r~~eg~i~~ir~a~e~~iPiLGICL 399 (564)
....|..-.+-+|...++|+++.|.
T Consensus 78 ---~~d~Gt~~EiG~A~algkPV~~l~~ 102 (152)
T 4fyk_A 78 ---QPSLGVGYELGRAVALGKPILCLFR 102 (152)
T ss_dssp ---SCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ---CCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 2345677778889999999999986
No 142
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=57.72 E-value=7.8 Score=38.44 Aligned_cols=89 Identities=21% Similarity=0.132 Sum_probs=48.8
Q ss_pred eEEEEEeccCC--CcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCC
Q 008476 298 VRIAMVGKYTG--LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (564)
Q Consensus 298 ~~IavVGkY~~--~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r 375 (564)
.||+++.+..+ .......+.+.|+..|+++.+. ...++.+..... . .. .......++|.||+-||-|.
T Consensus 6 kki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~----~~~~~~~~~~~~--~--~~-~~~~~~~~~D~vi~~GGDGT- 75 (292)
T 2an1_A 6 KCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVE----QQIAHELQLKNV--P--TG-TLAEIGQQADLAVVVGGDGN- 75 (292)
T ss_dssp CEEEEECC-------CHHHHHHHHHHHTTCEEEEE----HHHHHHTTCSSC--C--EE-CHHHHHHHCSEEEECSCHHH-
T ss_pred cEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEe----cchhhhcccccc--c--cc-chhhcccCCCEEEEEcCcHH-
Confidence 36888866432 2234567889999999876431 011111000000 0 00 00112346899999997442
Q ss_pred chhHHHHHHHHHHHcCCCEEEEehh
Q 008476 376 GVQGKILAAKYAREHRIPYLGICLG 400 (564)
Q Consensus 376 ~~eg~i~~ir~a~e~~iPiLGICLG 400 (564)
...+++.+.+.++|+|||=+|
T Consensus 76 ----~l~a~~~~~~~~~P~lGI~~G 96 (292)
T 2an1_A 76 ----MLGAARTLARYDINVIGINRG 96 (292)
T ss_dssp ----HHHHHHHHTTSSCEEEEBCSS
T ss_pred ----HHHHHHHhhcCCCCEEEEECC
Confidence 556677776678999999655
No 143
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=57.53 E-value=33 Score=34.82 Aligned_cols=41 Identities=32% Similarity=0.515 Sum_probs=33.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (564)
..|.+||- .|.||=..+..++..|..+|.+|.++-.||.-.
T Consensus 80 ~~I~i~G~--~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp~~~ 120 (355)
T 3p32_A 80 HRVGITGV--PGVGKSTAIEALGMHLIERGHRVAVLAVDPSST 120 (355)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEEEC----
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhCCCceEEEecCCCCC
Confidence 35777874 999999999999999999999999999998655
No 144
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=57.49 E-value=11 Score=34.60 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=29.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
+.|++||+ +|-||...+.-|...|...|++|...
T Consensus 10 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~~~~v~~~ 43 (215)
T 1nn5_A 10 ALIVLEGV--DRAGKSTQSRKLVEALCAAGHRAELL 43 (215)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 57999997 78899999999999999999998543
No 145
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=56.31 E-value=13 Score=40.25 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=35.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
+.|.++|- .|.||=.+++.|+..|+.+|.+|.++-.|||-
T Consensus 102 ~vI~ivG~--~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 102 NVIMFVGL--QGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 46777754 79999999999999999999999999999974
No 146
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=56.24 E-value=50 Score=31.30 Aligned_cols=33 Identities=15% Similarity=0.066 Sum_probs=22.8
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+... ......++.+.+.++|+.-+
T Consensus 60 ~~vdgiIi~~~~~----~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 60 QKPDAIIEQLGNL----DVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp HCCSEEEEESSCH----HHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCCh----hhhHHHHHHHHHCCCcEEEe
Confidence 5899999876321 23345677778889998655
No 147
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=56.21 E-value=9 Score=39.70 Aligned_cols=45 Identities=22% Similarity=0.365 Sum_probs=30.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH------HCCCeeEEeeecccccCC
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK------ACGLRVTCIKIDPYLNTD 46 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~------~~g~~v~~~k~dpyln~d 46 (564)
+|-|.|++| --|.||=.+|+.++..|. .+|+||-++-+||.-|..
T Consensus 111 ~~vIav~s~-KGGvGKTT~a~nLA~~LA~~g~~~~~g~rVlliD~D~~~~l~ 161 (403)
T 3ez9_A 111 PYVIFVVNL-KGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLDPQASST 161 (403)
T ss_dssp CEEEEECCC---------CHHHHHHHHHSCGGGGGGCCCEEEEEESSSSGGG
T ss_pred ceEEEEEcC-CCCchHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCChh
Confidence 366777754 367899999999999998 689999999999976643
No 148
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=55.88 E-value=10 Score=36.80 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=31.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|+.|+++|. +|-||...|..|...|...|+.+..+-.|.
T Consensus 4 ~~lIvl~G~--pGSGKSTla~~La~~L~~~g~~~i~~~~D~ 42 (260)
T 3a4m_A 4 IMLIILTGL--PGVGKSTFSKNLAKILSKNNIDVIVLGSDL 42 (260)
T ss_dssp CEEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEECTHH
T ss_pred CEEEEEEcC--CCCCHHHHHHHHHHHHHhCCCEEEEECchH
Confidence 478999997 899999999999999998998775443343
No 149
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=55.73 E-value=12 Score=39.93 Aligned_cols=57 Identities=19% Similarity=0.332 Sum_probs=39.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg 64 (564)
|.|-||| +=||+.|++=|+.+|++.|++.+. ++.--+| +.|...-.+..+++|.+=|
T Consensus 120 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 176 (491)
T 2f00_A 120 HGIAIAG----THGKTTTTAMVSSIYAEAGLDPTF-VNGGLVK-AAGVHARLGHGRYLIAEAD 176 (491)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCeec-cccccccCCCCCEEEEEeC
Confidence 6788888 569999999999999999998543 3333333 3332111234578888876
No 150
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=55.27 E-value=7.9 Score=36.37 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=24.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
+|-++||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 2 ~k~vlITGas-~gIG~~-----ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEA-----IARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 5889999985 777764 45667788998877543
No 151
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=54.75 E-value=14 Score=35.03 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=31.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
++|.++|. +|-||+..+.-|...|+.+|++|...+
T Consensus 7 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~v~~~~ 41 (213)
T 4edh_A 7 LFVTLEGP--EGAGKSTNRDYLAERLRERGIEVQLTR 41 (213)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHHHcCCCccccc
Confidence 68999985 799999999999999999999986554
No 152
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=54.23 E-value=12 Score=34.38 Aligned_cols=34 Identities=32% Similarity=0.426 Sum_probs=25.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|| |+||||- |-+.+.+.+.|.++|++|.++--+|
T Consensus 1 Mk-ilVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MK-IAVLGAT------GRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CE-EEEEcCC------CHHHHHHHHHHHHCCCEEEEEEecc
Confidence 67 9999974 4445566677888899999886554
No 153
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=53.69 E-value=11 Score=39.28 Aligned_cols=39 Identities=23% Similarity=0.219 Sum_probs=33.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
||++|++| -.|.||=.+|++++..|..+|.||-++-. |-
T Consensus 2 ~~i~~~~g--kGG~GKTt~a~~la~~la~~g~~vllvd~-~~ 40 (374)
T 3igf_A 2 ALILTFLG--KSGVARTKIAIAAAKLLASQGKRVLLAGL-AE 40 (374)
T ss_dssp CEEEEEEC--SBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SC
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CC
Confidence 46777776 44999999999999999999999999987 63
No 154
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=53.43 E-value=7 Score=37.15 Aligned_cols=35 Identities=43% Similarity=0.606 Sum_probs=25.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
+|-++||||- ||||+.++- .|++..|++|.+.-.+
T Consensus 4 ~k~vlITGas-~gIG~~~a~----~l~~~~g~~v~~~~~~ 38 (244)
T 4e4y_A 4 MANYLVTGGS-KGIGKAVVE----LLLQNKNHTVINIDIQ 38 (244)
T ss_dssp CEEEEEETTT-SHHHHHHHH----HHTTSTTEEEEEEESS
T ss_pred CCeEEEeCCC-ChHHHHHHH----HHHhcCCcEEEEeccc
Confidence 5889999986 788876553 3444489988876544
No 155
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=53.36 E-value=8.7 Score=36.50 Aligned_cols=33 Identities=30% Similarity=0.480 Sum_probs=24.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
+|-++||||- ||||+. +.+.|.++|++|.+.-.
T Consensus 3 ~k~vlVTGas-~GIG~a-----~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAG-SGLGRA-----LTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 3789999986 777775 45667788999877643
No 156
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=53.31 E-value=7.4 Score=36.54 Aligned_cols=31 Identities=26% Similarity=0.543 Sum_probs=23.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
+|-|+||||- +|||+.+ .+.|.++|++|.+.
T Consensus 1 ~k~vlITGas-ggiG~~~-----a~~l~~~G~~v~~~ 31 (245)
T 2ph3_A 1 MRKALITGAS-RGIGRAI-----ALRLAEDGFALAIH 31 (245)
T ss_dssp CCEEEETTTT-SHHHHHH-----HHHHHTTTCEEEEE
T ss_pred CCEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 5889999994 7777754 45666789887764
No 157
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=53.25 E-value=15 Score=33.61 Aligned_cols=34 Identities=32% Similarity=0.313 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|| |+||||- |-+.+.+-+.|.++|++|.++--+|
T Consensus 1 Mk-vlVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MK-IGIIGAT------GRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred Ce-EEEEcCC------chhHHHHHHHHHhCCCEEEEEEcCc
Confidence 56 8999974 4445566677888899999876553
No 158
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=53.07 E-value=14 Score=35.13 Aligned_cols=78 Identities=17% Similarity=0.255 Sum_probs=53.0
Q ss_pred EEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCc
Q 008476 112 QVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGE 191 (564)
Q Consensus 112 qviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdies~pf~ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e 191 (564)
.|||-|.|+ +.++++- ...+++|++ ++|+++.+. +.+.+++. .| ...|||+.++--|+
T Consensus 11 piI~Avr~~--~~l~~al-------~s~~~~ifl-l~g~i~~l~-----~~v~~lk~-~~--K~v~Vh~Dli~Gls---- 68 (192)
T 3kts_A 11 SIIPAAHNQ--KDMEKIL-------ELDLTYMVM-LETHVAQLK-----ALVKYAQA-GG--KKVLLHADLVNGLK---- 68 (192)
T ss_dssp CEEEEESSS--HHHHHHT-------TSSCCEEEE-CSEETTTHH-----HHHHHHHH-TT--CEEEEEGGGEETCC----
T ss_pred CEEEEecCH--HHHHHHH-------cCCCCEEEE-ecCcHHHHH-----HHHHHHHH-cC--CeEEEecCchhccC----
Confidence 578877664 2344443 345788888 787776654 44555544 44 48999999998773
Q ss_pred cccCCchhhhhhhhhCCCcccEEEE
Q 008476 192 QKTKPTQHSVRGLRGQGLTPNILAC 216 (564)
Q Consensus 192 ~ktkptq~svk~l~s~Gi~pd~lv~ 216 (564)
+-+.+++-|. .+..||+||-
T Consensus 69 ----~d~~ai~fL~-~~~~pdGIIs 88 (192)
T 3kts_A 69 ----NDDYAIDFLC-TEICPDGIIS 88 (192)
T ss_dssp ----CSHHHHHHHH-HTTCCSEEEE
T ss_pred ----CcHHHHHHHH-hCCCCCEEEe
Confidence 4567888776 4889999875
No 159
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=52.68 E-value=7.9 Score=38.28 Aligned_cols=35 Identities=26% Similarity=0.387 Sum_probs=25.6
Q ss_pred CCCEEEeCCCCCCCchhHHHHHHHHHHHc--CCCEEEEehhH
Q 008476 362 GADGILVPGGFGNRGVQGKILAAKYAREH--RIPYLGICLGM 401 (564)
Q Consensus 362 ~~DGIllpGGfG~r~~eg~i~~ir~a~e~--~iPiLGICLGm 401 (564)
++|.||+-||-|. ...+++.+... ++|++||=+|.
T Consensus 35 ~~D~vv~lGGDGT-----~l~aa~~~~~~~~~~PilGIn~G~ 71 (272)
T 2i2c_A 35 EPEIVISIGGDGT-----FLSAFHQYEERLDEIAFIGIHTGH 71 (272)
T ss_dssp SCSEEEEEESHHH-----HHHHHHHTGGGTTTCEEEEEESSS
T ss_pred CCCEEEEEcCcHH-----HHHHHHHHhhcCCCCCEEEEeCCC
Confidence 5699999997442 45566666654 89999997763
No 160
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=52.64 E-value=7.1 Score=36.58 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-++||||- +|||+.++ +.|.++|++|.+.-.+
T Consensus 7 k~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 39 (223)
T 3uce_A 7 TVYVVLGGT-SGIGAELA-----KQLESEHTIVHVASRQ 39 (223)
T ss_dssp EEEEEETTT-SHHHHHHH-----HHHCSTTEEEEEESGG
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEecCC
Confidence 789999986 78887655 5677889998876544
No 161
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=52.36 E-value=10 Score=32.73 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=25.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
+.|+|+|+ |-+..++.+.|..+|++|.++-.||
T Consensus 7 ~~v~I~G~-------G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS-------EAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC-------SHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC-------CHHHHHHHHHHHHCCCeEEEEECCH
Confidence 45777775 4477889999999999999887654
No 162
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=52.30 E-value=10 Score=36.10 Aligned_cols=31 Identities=29% Similarity=0.278 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
+|-++||||- +|||+.++ +.|.++|++|.+.
T Consensus 1 ~k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHAR-HFAGPAAV-----EALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESSTT-STTHHHHH-----HHHHHTTCEEEEC
T ss_pred CCEEEEECCC-ChHHHHHH-----HHHHHCCCEEEEe
Confidence 4789999985 89998654 5667789988664
No 163
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=52.05 E-value=13 Score=33.18 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=27.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
++|+++|. +|-||...+..|...|...|++...+
T Consensus 4 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~i 37 (192)
T 1kht_A 4 KVVVVTGV--PGVGSTTSSQLAMDNLRKEGVNYKMV 37 (192)
T ss_dssp CEEEEECC--TTSCHHHHHHHHHHHHHTTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCcceEEE
Confidence 48999995 89999999999999898888544433
No 164
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=51.77 E-value=46 Score=31.88 Aligned_cols=33 Identities=18% Similarity=0.061 Sum_probs=22.0
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+.... . ....++.+.+.++|+.-+
T Consensus 60 ~~vdgiIi~~~~~~-~---~~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 60 KNPAGIAISAIDPV-E---LTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp HCCSEEEECCSSTT-T---THHHHHHHHHTTCCEEEE
T ss_pred hCCCEEEEcCCCHH-H---HHHHHHHHHHCCCcEEEE
Confidence 58999999874322 1 234566677789998654
No 165
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=51.59 E-value=17 Score=38.18 Aligned_cols=55 Identities=29% Similarity=0.451 Sum_probs=40.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCcc-----ccceEEEccCCccccCC
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPF-----EHGEVFVLDDGGEVDLD 70 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~-----~hgev~v~~dg~e~dld 70 (564)
|.|-||| +=||+.|++=|+.+|++.|++|...- |+. .|+ +.++++|.+=|. -+||
T Consensus 105 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~g-----nig----~~~~~~~~~~~d~~VlE~~~-~~l~ 164 (439)
T 2x5o_A 105 PIVAITG----SNGKSTVTTLVGEMAKAAGVNVGVGG-----NIG----LPALMLLDDECELYVLELSS-FQLE 164 (439)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCEEEEE-----SSS----BCHHHHCCTTCCEEEEECCH-HHHH
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhcCCCEEEec-----ccC----HHHHHHhCCCCCEEEEECCc-hhhc
Confidence 5788888 56999999999999999999987542 321 122 456888888664 4443
No 166
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=50.77 E-value=48 Score=32.40 Aligned_cols=88 Identities=13% Similarity=0.068 Sum_probs=51.2
Q ss_pred ceEEEEEeccCCCc--chHH---------HHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCE
Q 008476 297 PVRIAMVGKYTGLS--DAYL---------SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADG 365 (564)
Q Consensus 297 ~~~IavVGkY~~~~--Day~---------SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DG 365 (564)
.+||.|.++|..-+ ++-. -+.++|+..|+++.+ +..++.+.. .+ .+.|+++|.
T Consensus 7 ~~~vlv~~~~~h~~~~~~v~~~~p~g~~~~i~~~L~~~gf~V~~------~t~dd~~~~---~~-------~~~L~~~Dv 70 (252)
T 1t0b_A 7 PIRVVVWNEFRHEKKDEQVRAIYPEGMHTVIASYLAEAGFDAAT------AVLDEPEHG---LT-------DEVLDRCDV 70 (252)
T ss_dssp CCEEEEEECCCHHHHCHHHHHHCTTCHHHHHHHHHHHTTCEEEE------EESSSGGGG---CC-------HHHHHTCSE
T ss_pred CcEEEEECCccccccchhhhccCchHHHHHHHHHHhhCCcEEEE------EeccCcccc---CC-------HhHHhcCCE
Confidence 47898888764110 1111 237778888877654 222222110 00 146899999
Q ss_pred EEeCC-CCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 008476 366 ILVPG-GFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (564)
Q Consensus 366 IllpG-GfG~r~~eg~i~~ir~a~e~~iPiLGICLG 400 (564)
||+-| ..++.-.+...++++...+++.+++||=-|
T Consensus 71 vV~~~~~~~~~l~~~~~~al~~~V~~GgG~vgiH~a 106 (252)
T 1t0b_A 71 LVWWGHIAHDEVKDEVVERVHRRVLEGMGLIVLHSG 106 (252)
T ss_dssp EEEECSSCGGGSCHHHHHHHHHHHHTTCEEEEEGGG
T ss_pred EEEecCCCCCcCCHHHHHHHHHHHHcCCCEEEEccc
Confidence 99833 122222245667788888899999999444
No 167
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=50.61 E-value=16 Score=38.21 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=28.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 50 ~vI~VTGT----nGKtTT~~~l~~iL~~~G~~~g~~ 81 (422)
T 1w78_A 50 FVFTVAGT----NGKGTTCRTLESILMAAGYKVGVY 81 (422)
T ss_dssp EEEEEECS----SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEeCC----cChHHHHHHHHHHHHHCCCCEEEE
Confidence 67889984 699999999999999999998765
No 168
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=50.21 E-value=10 Score=36.24 Aligned_cols=32 Identities=34% Similarity=0.441 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 8 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 8 KVALITGAS-SGIGEAT-----ARALAAEGAAVAIAAR 39 (247)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 789999985 7888754 4667778999877643
No 169
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=50.08 E-value=12 Score=35.89 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=25.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|-|+||||- +|||+. |.+.|.++|++|.+.-.++
T Consensus 23 k~vlITGas-~gIG~~-----la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 23 KNILVLGGS-GALGAE-----VVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeCCc
Confidence 789999996 677764 5567778899998875443
No 170
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=49.65 E-value=17 Score=33.17 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=29.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
+.|++||+ +|-||...+..|...|...|++|...
T Consensus 11 ~~I~l~G~--~GsGKST~~~~L~~~l~~~~~~~~~~ 44 (212)
T 2wwf_A 11 KFIVFEGL--DRSGKSTQSKLLVEYLKNNNVEVKHL 44 (212)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEcC--CCCCHHHHHHHHHHHHHHcCCcEEEE
Confidence 58999997 68899999999999999999988543
No 171
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=49.62 E-value=50 Score=31.28 Aligned_cols=33 Identities=21% Similarity=0.084 Sum_probs=22.2
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+ . ....++.+.+.++|+.-+
T Consensus 63 ~~vdgiI~~~~~~~-~---~~~~~~~~~~~~iPvV~~ 95 (293)
T 3l6u_A 63 LKVDAIFITTLDDV-Y---IGSAIEEAKKAGIPVFAI 95 (293)
T ss_dssp TTCSEEEEECSCTT-T---THHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCChH-H---HHHHHHHHHHcCCCEEEe
Confidence 58999999764322 1 224566777789998765
No 172
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=49.28 E-value=10 Score=37.08 Aligned_cols=33 Identities=39% Similarity=0.592 Sum_probs=26.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-|+||||- ||||+.| .+.|-+.|.+|.+.-.|
T Consensus 3 K~vlVTGas-~GIG~ai-----a~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGG-HGIGKQI-----CLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEecCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999994 8888854 56788899999886443
No 173
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=49.22 E-value=16 Score=32.91 Aligned_cols=39 Identities=33% Similarity=0.344 Sum_probs=33.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
++|+++|- +|-||-..+..|...|..+|++|..+.-|.+
T Consensus 14 ~~i~l~G~--~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~~ 52 (186)
T 2yvu_A 14 IVVWLTGL--PGSGKTTIATRLADLLQKEGYRVEVLDGDWA 52 (186)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEHHHH
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHHHhcCCeEEEeeHHHH
Confidence 57889985 8999999999999999999999888766654
No 174
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=49.17 E-value=54 Score=32.34 Aligned_cols=81 Identities=15% Similarity=0.041 Sum_probs=50.5
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCch
Q 008476 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (564)
Q Consensus 298 ~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~~ 377 (564)
.+|.+|+.-. ..+.-..+.++|+..|+++.+ ++.+++... .+.|.++|.||++.-....-.
T Consensus 5 ~~vLiV~g~~-~~~~a~~l~~aL~~~g~~V~~------i~~~~~~~~------------~~~L~~yDvIIl~d~~~~~l~ 65 (259)
T 3rht_A 5 TRVLYCGDTS-LETAAGYLAGLMTSWQWEFDY------IPSHVGLDV------------GELLAKQDLVILSDYPAERMT 65 (259)
T ss_dssp -CEEEEESSC-TTTTHHHHHHHHHHTTCCCEE------ECTTSCBCS------------SHHHHTCSEEEEESCCGGGBC
T ss_pred ceEEEECCCC-chhHHHHHHHHHHhCCceEEE------ecccccccC------------hhHHhcCCEEEEcCCccccCC
Confidence 4788886221 123446788899999998866 666555221 156899999999862221112
Q ss_pred hHHHHHHHHHHHcCCCEEEE
Q 008476 378 QGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 378 eg~i~~ir~a~e~~iPiLGI 397 (564)
+...++++...+++-=++.+
T Consensus 66 ~~~~~~L~~yV~~GGgLi~~ 85 (259)
T 3rht_A 66 AQAIDQLVTMVKAGCGLVML 85 (259)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCeEEEe
Confidence 55667777766666555554
No 175
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=49.16 E-value=44 Score=31.86 Aligned_cols=86 Identities=15% Similarity=0.148 Sum_probs=44.0
Q ss_pred CceEEEEEeccCCC-cchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEeCCCC
Q 008476 296 EPVRIAMVGKYTGL-SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (564)
Q Consensus 296 ~~~~IavVGkY~~~-~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIllpGGf 372 (564)
++.+||++=..... ..-|..+++.++.+..+....+.+...+.+ .+ .-....+.+ .++||||+.+..
T Consensus 7 ~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~--~~--------~~~~~~~~l~~~~vdgiIi~~~~ 76 (288)
T 3gv0_A 7 KTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIHA--KD--------SMVPIRYILETGSADGVIISKIE 76 (288)
T ss_dssp CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEECCBSSG--GG--------TTHHHHHHHHHTCCSEEEEESCC
T ss_pred CCCEEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEEEecCCcc--hh--------HHHHHHHHHHcCCccEEEEecCC
Confidence 45689988432211 123556666666665555444333222211 10 001122223 689999998633
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 373 G~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
... ..++.+.+.++|+.-+
T Consensus 77 ~~~------~~~~~l~~~~iPvV~i 95 (288)
T 3gv0_A 77 PND------PRVRFMTERNMPFVTH 95 (288)
T ss_dssp TTC------HHHHHHHHTTCCEEEE
T ss_pred CCc------HHHHHHhhCCCCEEEE
Confidence 221 3456666778998654
No 176
>1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A
Probab=49.10 E-value=15 Score=38.39 Aligned_cols=32 Identities=44% Similarity=0.657 Sum_probs=28.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 40 ~vI~VtGT----nGKtTT~~~l~~iL~~~G~~vg~~ 71 (428)
T 1jbw_A 40 RYIHVTGT----NGKGSAANAIAHVLEASGLTVGLY 71 (428)
T ss_dssp CEEEEECS----SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC----CChHHHHHHHHHHHHHCCCCEEEE
Confidence 57888984 699999999999999999998654
No 177
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=48.91 E-value=48 Score=31.76 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=22.2
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+ . ....++.+.+.++|+.-+
T Consensus 60 ~~vdgiii~~~~~~-~---~~~~~~~~~~~giPvV~~ 92 (297)
T 3rot_A 60 TYPSGIATTIPSDT-A---FSKSLQRANKLNIPVIAV 92 (297)
T ss_dssp TCCSEEEECCCCSS-T---THHHHHHHHHHTCCEEEE
T ss_pred cCCCEEEEeCCCHH-H---HHHHHHHHHHCCCCEEEE
Confidence 58999999764222 1 234566777789998654
No 178
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=48.88 E-value=72 Score=30.04 Aligned_cols=85 Identities=13% Similarity=0.114 Sum_probs=44.8
Q ss_pred CCceEEEEEeccCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEeCCC
Q 008476 295 HEPVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 371 (564)
Q Consensus 295 ~~~~~IavVGkY~~~~Da-y~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIllpGG 371 (564)
+++.+||++-. ...+. |..+++.++.+..+....+.+...+.+ . +.-.+..+.+ .++||||+.+.
T Consensus 5 ~~s~~Igvi~~--~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~-~---------~~~~~~~~~l~~~~vdgiIi~~~ 72 (276)
T 3jy6_A 5 QSSKLIAVIVA--NIDDYFSTELFKGISSILESRGYIGVLFDANAD-I---------EREKTLLRAIGSRGFDGLILQSF 72 (276)
T ss_dssp CCCCEEEEEES--CTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTC-H---------HHHHHHHHHHHTTTCSEEEEESS
T ss_pred CCCcEEEEEeC--CCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC-H---------HHHHHHHHHHHhCCCCEEEEecC
Confidence 34568998842 23334 345666555554444443333332211 1 1111122222 58999999874
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 372 FGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 372 fG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
.. ...++.+.+.++|+.-+.
T Consensus 73 ~~-------~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 73 SN-------PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp CC-------HHHHHHHHTTSSCEEEES
T ss_pred Cc-------HHHHHHHHHCCCCEEEEe
Confidence 32 345666777899986553
No 179
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=48.67 E-value=12 Score=36.39 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- ||||+.+ .+.|-++|++|.+.=
T Consensus 7 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 37 (274)
T 3e03_A 7 KTLFITGAS-RGIGLAI-----ALRAARDGANVAIAA 37 (274)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999997 8888755 466778899887753
No 180
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=48.53 E-value=10 Score=35.74 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.=.
T Consensus 15 k~vlITGas-~gIG~~i-----a~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 15 RVILVTGAA-RGIGAAA-----ARAYAAHGASVVLLGR 46 (247)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEec
Confidence 789999995 7888754 5667788999877543
No 181
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=47.65 E-value=13 Score=35.78 Aligned_cols=32 Identities=25% Similarity=0.198 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- ||||+. +.+.|-++|++|.+.-.
T Consensus 8 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 8 ATVAVIGAG-DYIGAE-----IAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CEEEEECCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999996 777764 55667788999887643
No 182
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=47.53 E-value=17 Score=31.72 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=29.9
Q ss_pred CCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEehhHHHH
Q 008476 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVA 404 (564)
Q Consensus 362 ~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGICLGmQll 404 (564)
++.+|++..|+-+ -++.+.|+++++.++|=|+|+++-
T Consensus 82 g~k~v~~~~G~~~------~e~~~~a~~~Girvv~nC~gv~l~ 118 (122)
T 3ff4_A 82 KPKRVIFNPGTEN------EELEEILSENGIEPVIGCTLVMLS 118 (122)
T ss_dssp CCSEEEECTTCCC------HHHHHHHHHTTCEEEESCHHHHHH
T ss_pred CCCEEEECCCCCh------HHHHHHHHHcCCeEECCcCeEEec
Confidence 6677888887743 367788899999999999999874
No 183
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=47.53 E-value=11 Score=36.63 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+.+ .+.|..+|++|.+.=.
T Consensus 13 k~vlITGas-~GIG~~~-----a~~L~~~G~~V~~~~r 44 (311)
T 3o26_A 13 RCAVVTGGN-KGIGFEI-----CKQLSSNGIMVVLTCR 44 (311)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred cEEEEecCC-chHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999997 8888754 4566678998877533
No 184
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=47.02 E-value=12 Score=36.28 Aligned_cols=33 Identities=39% Similarity=0.599 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-|+||||- ||||+.+ .+.|.++|++|.+.-.+
T Consensus 15 k~vlVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 15 KVAIVTGGS-SGIGLAV-----VDALVRYGAKVVSVSLD 47 (269)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999986 7788754 45677889999876443
No 185
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=46.92 E-value=15 Score=38.69 Aligned_cols=31 Identities=42% Similarity=0.604 Sum_probs=27.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
|.|=|||- =|||-|++-|..+|++.||+|-.
T Consensus 53 ~vI~VtGT----NGKgSt~~~l~~iL~~~G~~vg~ 83 (437)
T 3nrs_A 53 KIFTVAGT----NGKGTTCCTLEAILLAAGLRVGV 83 (437)
T ss_dssp EEEEEECS----SSHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECC----cChHHHHHHHHHHHHHCCCcEEE
Confidence 67888885 69999999999999999999965
No 186
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=46.91 E-value=12 Score=36.61 Aligned_cols=30 Identities=40% Similarity=0.619 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 6 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 35 (281)
T 3zv4_A 6 EVALITGGA-SGLGRAL-----VDRFVAEGARVAVL 35 (281)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEE
Confidence 789999986 7777754 46677889998874
No 187
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=46.73 E-value=11 Score=36.41 Aligned_cols=32 Identities=38% Similarity=0.446 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- +|||+.+ .+.|-++|++|.+.-.
T Consensus 11 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 11 KTALVTGST-AGIGKAI-----ATSLVAEGANVLINGR 42 (267)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999985 7777654 4667788999887643
No 188
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=46.64 E-value=24 Score=37.47 Aligned_cols=38 Identities=24% Similarity=0.215 Sum_probs=31.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (564)
|.|-||| +=||+.|++=|+.+|++.|++++. .+-|.+|
T Consensus 115 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~~~~-~~~g~~~ 152 (469)
T 1j6u_A 115 EEFAVTG----TDGKTTTTAMVAHVLKHLRKSPTV-FLGGIMD 152 (469)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEE-ECSSCCT
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceE-EECCeec
Confidence 5788888 469999999999999999999853 4566654
No 189
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=46.60 E-value=12 Score=36.06 Aligned_cols=32 Identities=34% Similarity=0.422 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 9 k~~lVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 9 AVAVVTGGS-SGIGLAT-----VELLLEAGAAVAFCAR 40 (265)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7777654 4667788998877543
No 190
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=46.51 E-value=15 Score=35.16 Aligned_cols=31 Identities=29% Similarity=0.409 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 1 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 31 (248)
T 3asu_A 1 MIVLVTGAT-AGFGECI-----TRRFIQQGHKVIATG 31 (248)
T ss_dssp CEEEETTTT-STTHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 568999984 8999765 456777899988753
No 191
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=46.47 E-value=11 Score=36.78 Aligned_cols=67 Identities=19% Similarity=0.113 Sum_probs=43.1
Q ss_pred HHHHHHHHHHcCCcceeeeEEEEecCC----CcccccccCCchhhhHHHHhccCCCEEEeCCCCCCC------------c
Q 008476 313 YLSILKALLHASVDLRKKLVIDWIPAC----DLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR------------G 376 (564)
Q Consensus 313 y~SIi~aL~~aG~~v~v~v~i~wi~s~----~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r------------~ 376 (564)
...+.++|+..++++.+ ++.. .+.. ..+.|+++|.||+.+-.... .
T Consensus 42 ~~~l~~aL~~~~~~v~~------~~~~~~~~~fp~------------~~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~ 103 (256)
T 2gk3_A 42 ATWLLECLRKGGVDIDY------MPAHTVQIAFPE------------SIDELNRYDVIVISDIGSNTFLLQNETFYQLKI 103 (256)
T ss_dssp CHHHHHHHHHTTCEEEE------ECHHHHHHCCCC------------SHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCC
T ss_pred HHHHHHHHHhcCceEEE------EecccchhhCCc------------ChhHHhcCCEEEEeCCchhhccccccccccccc
Confidence 34688899988766543 3211 1110 12568899999999843210 0
Q ss_pred hhHHHHHHHHHHHcCCCEEEE
Q 008476 377 VQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 377 ~eg~i~~ir~a~e~~iPiLGI 397 (564)
.+...++++...+++..+++|
T Consensus 104 ~~~~~~~l~~~V~~GGgll~i 124 (256)
T 2gk3_A 104 KPNALESIKEYVKNGGGLLMI 124 (256)
T ss_dssp CCCHHHHHHHHHHTTCEEEEE
T ss_pred ChHHHHHHHHHHHhCCEEEEE
Confidence 134577888888889999999
No 192
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=46.27 E-value=14 Score=36.21 Aligned_cols=33 Identities=39% Similarity=0.678 Sum_probs=26.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-++||||- ||||+. +.+.|-+.|.+|.+.-.|
T Consensus 12 K~alVTGas-~GIG~a-----ia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 12 QQVLVTGGS-SGIGAA-----IAMQFAELGAEVVALGLD 44 (242)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 779999995 788875 467888999999886543
No 193
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=46.24 E-value=12 Score=36.40 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- ||||+. +.+.|.++|++|.+.-
T Consensus 17 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 17 KLVVITGAS-SGIGEA-----IARRFSEEGHPLLLLA 47 (266)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEE
Confidence 789999995 777775 4567778899998753
No 194
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=46.22 E-value=11 Score=35.89 Aligned_cols=30 Identities=43% Similarity=0.554 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- ||||+. +.+.|.++|++|.+.
T Consensus 7 k~vlVTGas-~gIG~a-----~a~~l~~~G~~V~~~ 36 (247)
T 3rwb_A 7 KTALVTGAA-QGIGKA-----IAARLAADGATVIVS 36 (247)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 777764 456777889998874
No 195
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=45.93 E-value=14 Score=35.29 Aligned_cols=32 Identities=31% Similarity=0.528 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 8 k~~lVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 39 (257)
T 3tpc_A 8 RVFIVTGAS-SGLGAA-----VTRMLAQEGATVLGLDL 39 (257)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999995 777764 45677788999987643
No 196
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=45.90 E-value=14 Score=36.22 Aligned_cols=31 Identities=32% Similarity=0.527 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+. +.+.|..+|++|.+.-
T Consensus 30 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~~ 60 (277)
T 3gvc_A 30 KVAIVTGAG-AGIGLA-----VARRLADEGCHVLCAD 60 (277)
T ss_dssp CEEEETTTT-STHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999986 888875 4556777899988763
No 197
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=45.86 E-value=15 Score=32.24 Aligned_cols=25 Identities=20% Similarity=0.251 Sum_probs=19.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll 27 (564)
|+.|+++|+ ||-||...+.-|...|
T Consensus 1 M~~i~l~G~--~GsGKsT~~~~L~~~l 25 (173)
T 3kb2_A 1 MTLIILEGP--DCCFKSTVAAKLSKEL 25 (173)
T ss_dssp -CEEEEECS--SSSSHHHHHHHHHHHH
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHh
Confidence 678999995 8999988777666544
No 198
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=45.74 E-value=14 Score=34.82 Aligned_cols=33 Identities=39% Similarity=0.597 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 3 k~vlVTGas-~giG~~-----~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTGGS-RGIGRA-----IAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 789999985 677764 456677889999876443
No 199
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=45.59 E-value=13 Score=36.31 Aligned_cols=30 Identities=30% Similarity=0.442 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- +|||+.+ .+.|-.+|++|.+.
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 63 (275)
T 4imr_A 34 RTALVTGSS-RGIGAAI-----AEGLAGAGAHVILH 63 (275)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 7787654 46677889998875
No 200
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=45.58 E-value=88 Score=29.67 Aligned_cols=34 Identities=21% Similarity=0.075 Sum_probs=22.7
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
.++||||+.+. + .......++.+.+.++|+.-+.
T Consensus 60 ~~vdgiii~~~--~--~~~~~~~~~~~~~~~ipvV~~~ 93 (303)
T 3d02_A 60 RKVDAITIVPN--D--ANVLEPVFKKARDAGIVVLTNE 93 (303)
T ss_dssp TTCSEEEECCS--C--HHHHHHHHHHHHHTTCEEEEES
T ss_pred cCCCEEEEecC--C--hHHHHHHHHHHHHCCCeEEEEe
Confidence 58999998763 1 1223345677777889987653
No 201
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=45.55 E-value=52 Score=31.07 Aligned_cols=30 Identities=10% Similarity=-0.066 Sum_probs=19.5
Q ss_pred CCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 362 ~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
++||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 57 ~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~~ 86 (277)
T 3cs3_A 57 MVDGAIILDWTFP---T---KEIEKFAERGHSIVVL 86 (277)
T ss_dssp TCSEEEEECTTSC---H---HHHHHHHHTTCEEEES
T ss_pred cccEEEEecCCCC---H---HHHHHHHhcCCCEEEE
Confidence 8999999774221 1 3445566678887654
No 202
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=45.50 E-value=11 Score=36.08 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+. +.+.|.++|++|.+.=.
T Consensus 8 k~~lVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 8 GLAIITGAS-QGIGAV-----IAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHHTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 689999996 777764 45566778998877643
No 203
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=45.37 E-value=45 Score=32.21 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=22.0
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+. ....++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~~----~~~~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 57 RGVDVLVIIPYNGQV----LSNVVKEAKQEGIKVLAY 89 (313)
T ss_dssp TTCSEEEEECSSTTS----CHHHHHHHHTTTCEEEEE
T ss_pred cCCCEEEEeCCChhh----hHHHHHHHHHCCCeEEEE
Confidence 589999998743221 224566677788998644
No 204
>1o5z_A Folylpolyglutamate synthase/dihydrofolate synthas; TM0166, structural genomics, JC protein structure initiative; 2.10A {Thermotoga maritima} SCOP: c.59.1.2 c.72.2.2
Probab=45.23 E-value=18 Score=38.13 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=28.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.|-||| +=|||.|++=|..+|++.|++|...
T Consensus 53 ~vI~VTG----TnGKtTT~~~l~~iL~~~G~~vg~~ 84 (442)
T 1o5z_A 53 KTIHIGG----TNGKGSVANMVSNILVSQGYRVGSY 84 (442)
T ss_dssp EEEEEEC----SSSHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CEEEEEC----CcCHHHHHHHHHHHHHHCCCCEEEE
Confidence 6788998 4699999999999999999998754
No 205
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=45.22 E-value=15 Score=35.57 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|.|+||||- +|||+.+ .+.|.++|++|.+.-.++
T Consensus 9 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~~ 42 (264)
T 2dtx_A 9 KVVIVTGAS-MGIGRAI-----AERFVDEGSKVIDLSIHD 42 (264)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEecCc
Confidence 789999985 7777654 566778899998875443
No 206
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=45.15 E-value=15 Score=35.22 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTGGA-RGIGRAI-----AQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 679999985 7777754 45677789998876433
No 207
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=45.11 E-value=13 Score=35.01 Aligned_cols=30 Identities=33% Similarity=0.467 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-|+||||- +|||+.+ .+.|.++|++|.+.
T Consensus 6 ~~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~ 35 (247)
T 2hq1_A 6 KTAIVTGSS-RGLGKAI-----AWKLGNMGANIVLN 35 (247)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred cEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999985 7777654 45677789988765
No 208
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=45.04 E-value=27 Score=32.37 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=33.0
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 008476 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (564)
Q Consensus 111 vqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggt-vgdies~pf~ea~rq~ 166 (564)
..++|.=-++|++.|++... ..++|++|+ .||| +|+--=.| ||++++
T Consensus 59 ~~iv~Dd~~~I~~al~~a~~------~~~~DlVit-tGG~s~g~~D~t~--eal~~~ 106 (178)
T 2pjk_A 59 YSLVPDDKIKILKAFTDALS------IDEVDVIIS-TGGTGYSPTDITV--ETIRKL 106 (178)
T ss_dssp EEEECSCHHHHHHHHHHHHT------CTTCCEEEE-ESCCSSSTTCCHH--HHHGGG
T ss_pred EEEeCCCHHHHHHHHHHHHh------cCCCCEEEE-CCCCCCCCCcchH--HHHHHH
Confidence 35788888999999999873 235898886 7887 56533334 666554
No 209
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=44.92 E-value=13 Score=35.91 Aligned_cols=33 Identities=39% Similarity=0.524 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|.++||||- +|||+. +.+.|-++|++|.++-.+
T Consensus 11 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTGGA-RGQGRS-----HAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCeEEEEccc
Confidence 789999996 677764 556777889999887443
No 210
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=44.86 E-value=51 Score=32.82 Aligned_cols=89 Identities=6% Similarity=-0.047 Sum_probs=51.0
Q ss_pred CceEEEEEeccCCCcchHH----HHHHHHHHcC-CcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCC
Q 008476 296 EPVRIAMVGKYTGLSDAYL----SILKALLHAS-VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPG 370 (564)
Q Consensus 296 ~~~~IavVGkY~~~~Day~----SIi~aL~~aG-~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpG 370 (564)
++.||.|++.-. .+| +. .+.+.|+..| +++.+. .+.+..+ +++.|. +.|+++|.||+.-
T Consensus 3 ~~~kvLiv~G~~-~H~-~~~~~~~l~~~l~~~g~f~V~~~-----~d~~~~~------d~~~f~---~~L~~~D~vV~~~ 66 (281)
T 4e5v_A 3 KPIKTLLITGQN-NHN-WQVSHVVLKQILENSGRFDVDFV-----ISPEQGK------DMSGFV---LDFSPYQLVVLDY 66 (281)
T ss_dssp CCEEEEEEESCC-SSC-HHHHHHHHHHHHHHTTSEEEEEE-----ECCCTTS------CCTTCC---CCCTTCSEEEECC
T ss_pred CceEEEEEcCCC-CCC-hHHHHHHHHHHHHhcCCEEEEEE-----eCCcccc------chhHHh---hhhhcCCEEEEeC
Confidence 457888887544 233 33 5566666666 666553 1111000 011111 3588999999644
Q ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEEehhH
Q 008476 371 GFGNRGVQGKILAAKYAREHRIPYLGICLGM 401 (564)
Q Consensus 371 GfG~r~~eg~i~~ir~a~e~~iPiLGICLGm 401 (564)
-++.-.....++++...+++.+++|+.-+.
T Consensus 67 -~~~~l~~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 67 -NGDSWPEETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp -CSSCCCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred -CCCcCCHHHHHHHHHHHHcCCCEEEEeccc
Confidence 333323456667777778899999998643
No 211
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=44.83 E-value=28 Score=32.05 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCc-------chHHHHHHHhhhhcCCCCEEEEEeeeeeee
Q 008476 118 TDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIES-------MPFIEALGQFSYRVGPGNFCLIHVSLVPVL 186 (564)
Q Consensus 118 t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdies-------~pf~ea~rq~~~~~~~~~~~~~h~~~vp~~ 186 (564)
|..+..|+.+... ..+||+|+|.+|. .|+-. .-+.+-+++|.......++-.+-+|..|.-
T Consensus 63 t~~~l~r~~~~v~------~~~Pd~vvi~~G~--ND~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 63 SYQFLLRFREDVI------NLSPALVVINAGT--NDVAENTGAYNEDYTFGNIASMAELAKANKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHTG------GGCCSEEEECCCH--HHHTTSSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHH------hcCCCEEEEEeCC--CcCccccccccHHHHHHHHHHhhHHHhccCceEEEEeeeccC
Confidence 4566677766321 3579999999985 34311 123344555443332244555556666654
No 212
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=44.74 E-value=12 Score=36.33 Aligned_cols=30 Identities=37% Similarity=0.627 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- ||||+. +.+.|-++|++|.+.
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~ 58 (269)
T 4dmm_A 29 RIALVTGAS-RGIGRA-----IALELAAAGAKVAVN 58 (269)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999986 777775 456677889988653
No 213
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=44.69 E-value=13 Score=35.11 Aligned_cols=31 Identities=32% Similarity=0.418 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+ ++.+.|.++|++|.+.-
T Consensus 6 k~vlITGas-~gIG~-----~~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 6 KVALVTGAS-RGIGF-----EVAHALASKGATVVGTA 36 (247)
T ss_dssp CEEEESSCS-SHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHH-----HHHHHHHHCCCEEEEEe
Confidence 789999985 77776 45567778899987653
No 214
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=44.61 E-value=15 Score=34.95 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 8 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 8 KNVWVTGAG-KGIGYAT-----ALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeCc
Confidence 679999986 7777754 46677889999887544
No 215
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=44.36 E-value=13 Score=35.39 Aligned_cols=29 Identities=38% Similarity=0.646 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
|.|+||||- +|||+. +.+.|.++|++|.+
T Consensus 14 k~vlITGas-~giG~~-----ia~~l~~~G~~v~~ 42 (256)
T 3ezl_A 14 RIAYVTGGM-GGIGTS-----ICQRLHKDGFRVVA 42 (256)
T ss_dssp EEEEETTTT-SHHHHH-----HHHHHHHTTEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 889999995 777765 45667778988764
No 216
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=44.24 E-value=77 Score=30.63 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=22.1
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+-.. ......++.+.+.++|+.-+
T Consensus 58 ~~vdgiIi~~~~~----~~~~~~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 58 KGVKVLVIASIDG----TTLSDVLKQAGEQGIKVIAY 90 (330)
T ss_dssp HTCSEEEECCSSG----GGGHHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEEcCCc----hhHHHHHHHHHHCCCCEEEE
Confidence 5899999987321 22334566777888988654
No 217
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=44.05 E-value=14 Score=35.78 Aligned_cols=32 Identities=38% Similarity=0.533 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 22 k~~lVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 22 RVALVTGGS-RGLGFGI-----AQGLAEAGCSVVVASR 53 (267)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7777655 4567778999877533
No 218
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=44.04 E-value=82 Score=29.96 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=21.2
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
.++||||+.+...+ . ..++.+.+.++|+.-+.
T Consensus 66 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 66 RDCDGVVVISHDLH---D---EDLDELHRMHPKMVFLN 97 (290)
T ss_dssp TTCSEEEECCSSSC---H---HHHHHHHHHCSSEEEES
T ss_pred cCccEEEEecCCCC---H---HHHHHHhhcCCCEEEEc
Confidence 58999999874322 1 23455566789987664
No 219
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=43.64 E-value=17 Score=34.24 Aligned_cols=34 Identities=32% Similarity=0.454 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|-++||||- +|||+ ++.+.|.++|++|.+.-.++
T Consensus 4 k~vlITGas-~gIG~-----~~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 4 GKVIVYGGK-GALGS-----AILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp EEEEEETTT-SHHHH-----HHHHHHHHTTEEEEEEESSC
T ss_pred CEEEEECCC-cHHHH-----HHHHHHHHCCCEEEEEecCc
Confidence 789999984 66665 45567778899998875443
No 220
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=43.57 E-value=14 Score=35.41 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- ||||+. +.+.|-++|++|.+.-.
T Consensus 9 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGGT-HGMGLA-----TVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777764 55677788999887543
No 221
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=43.54 E-value=1.3e+02 Score=29.14 Aligned_cols=85 Identities=14% Similarity=0.178 Sum_probs=43.2
Q ss_pred CceEEEEEeccCCCcchHH-HHHHHHHHcCCcc-eeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEeCCC
Q 008476 296 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDL-RKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 371 (564)
Q Consensus 296 ~~~~IavVGkY~~~~Day~-SIi~aL~~aG~~v-~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIllpGG 371 (564)
++.+||++-. . .+.|. .+++.++.+..+. ...+.+ .++.. +++.-.+..+.+ .++||||+.+.
T Consensus 5 ~~~~Igvi~~-~--~~~~~~~~~~gi~~~a~~~~g~~l~i--~~~~~--------~~~~~~~~i~~l~~~~vdgiIi~~~ 71 (325)
T 2x7x_A 5 PHFRIGVAQC-S--DDSWRHKMNDEILREAMFYNGVSVEI--RSAGD--------DNSKQAEDVHYFMDEGVDLLIISAN 71 (325)
T ss_dssp -CCEEEEEES-C--CSHHHHHHHHHHHHHHTTSSSCEEEE--EECTT--------CHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCeEEEEEec-C--CCHHHHHHHHHHHHHHHHcCCcEEEE--eCCCC--------CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 4568998832 2 33444 5666666654443 343333 22221 111111122222 58999999763
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 372 FGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 372 fG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.. ......++.+.+.++|+.-+
T Consensus 72 ~~----~~~~~~~~~~~~~~iPvV~~ 93 (325)
T 2x7x_A 72 EA----APMTPIVEEAYQKGIPVILV 93 (325)
T ss_dssp SH----HHHHHHHHHHHHTTCCEEEE
T ss_pred CH----HHHHHHHHHHHHCCCeEEEe
Confidence 21 12234566677788998655
No 222
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=43.46 E-value=66 Score=30.57 Aligned_cols=32 Identities=13% Similarity=0.298 Sum_probs=20.9
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
.++||||+.+...+. ..++.+.+.++|+.-+.
T Consensus 63 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~~ 94 (287)
T 3bbl_A 63 GNVDGFVLSSINYND------PRVQFLLKQKFPFVAFG 94 (287)
T ss_dssp TCCSEEEECSCCTTC------HHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeecCCCc------HHHHHHHhcCCCEEEEC
Confidence 589999997743221 34555666789987653
No 223
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=43.39 E-value=14 Score=36.04 Aligned_cols=33 Identities=27% Similarity=0.488 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|.++||||- ||||+.+ .+.|-.+|++|.+.-.+
T Consensus 5 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 5 KVILITGAS-GGIGEGI-----ARELGVAGAKILLGARR 37 (264)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCc-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 789999996 7888754 45677889998776443
No 224
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=43.28 E-value=23 Score=33.03 Aligned_cols=34 Identities=32% Similarity=0.491 Sum_probs=24.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
||-|+||||- ++||+-+ .+.|.++|++|.++-.+
T Consensus 1 Mk~vlVtGas-g~iG~~l-----~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITGSA-SGIGAAL-----KELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CcEEEEeCCC-cHHHHHH-----HHHHHhCCCEEEEEeCC
Confidence 6889999985 6666654 45666789999887543
No 225
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=43.27 E-value=16 Score=34.70 Aligned_cols=32 Identities=22% Similarity=0.548 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 8 KLAVITGGA-NGIGRAI-----AERFAVEGADIAIADL 39 (249)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEcC
Confidence 689999984 6777654 4567778999887543
No 226
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=43.25 E-value=87 Score=29.77 Aligned_cols=84 Identities=18% Similarity=0.092 Sum_probs=43.8
Q ss_pred ceEEEEEeccCCCcchH-HHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEeCCCCC
Q 008476 297 PVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 373 (564)
Q Consensus 297 ~~~IavVGkY~~~~Day-~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIllpGGfG 373 (564)
+.+||++-. ...+.| ..+.+.++.+..+....+ .+.++.+.+ ...+..+.+ .++||||+.+...
T Consensus 2 ~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~--~~~~~~~~~---------~~~~~i~~l~~~~vdgiii~~~~~ 68 (306)
T 8abp_A 2 NLKLGFLVK--QPEEPWFQTEWKFADKAGKDLGFEV--IKIAVPDGE---------KTLNAIDSLAASGAKGFVICTPDP 68 (306)
T ss_dssp CEEEEEEES--CTTSHHHHHHHHHHHHHHHHHTEEE--EEEECCSHH---------HHHHHHHHHHHTTCCEEEEECSCG
T ss_pred CeEEEEEeC--CCCchHHHHHHHHHHHHHHHcCCEE--EEeCCCCHH---------HHHHHHHHHHHcCCCEEEEeCCCc
Confidence 468998843 233343 355555555444433332 234443221 111122222 5899999987311
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 008476 374 NRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 374 ~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
......++.+.+.++|+.-+
T Consensus 69 ----~~~~~~~~~~~~~~iPvV~~ 88 (306)
T 8abp_A 69 ----KLGSAIVAKARGYDMKVIAV 88 (306)
T ss_dssp ----GGHHHHHHHHHHTTCEEEEE
T ss_pred ----hhhHHHHHHHHHCCCcEEEe
Confidence 22344567778889998644
No 227
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=43.21 E-value=15 Score=35.20 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 8 KVAVITGSS-SGIGLAI-----AEGFAKEGAHIVLVA 38 (263)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEc
Confidence 779999985 7777654 456777899887753
No 228
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=43.21 E-value=89 Score=29.43 Aligned_cols=37 Identities=19% Similarity=0.139 Sum_probs=23.3
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
.++||||+.+..... .......++.+.+.++|+.-+.
T Consensus 70 ~~vdgiIi~~~~~~~-~~~~~~~~~~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 70 QHIDGLIVEPTKSAL-QTPNIGYYLNLEKNGIPFAMIN 106 (298)
T ss_dssp TCCSEEEECCSSTTS-CCTTHHHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEecccccc-cCCcHHHHHHHHhcCCCEEEEe
Confidence 589999998743221 1112345666777899987553
No 229
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=43.19 E-value=19 Score=41.41 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=32.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-----CCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-----GLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~-----g~~v~~~k 38 (564)
|-|||+| .-|+.||=++++.|-++|+.+ |++|...|
T Consensus 35 ~~l~I~g-t~s~vGKT~vt~gL~r~l~~~~~~~~G~~V~~fK 75 (831)
T 4a0g_A 35 PTYLIWS-ANTSLGKTLVSTGIAASFLLQQPSSSATKLLYLK 75 (831)
T ss_dssp CEEEEEE-SSSSSCHHHHHHHHHHHHHSCSSCCTTCEEEEEE
T ss_pred ccEEEEE-CCCCCCHHHHHHHHHHHHHhcccccCCceEEEEc
Confidence 5567764 679999999999999999999 99999999
No 230
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=43.16 E-value=72 Score=30.15 Aligned_cols=31 Identities=23% Similarity=0.376 Sum_probs=21.2
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 68 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~ 98 (292)
T 3k4h_A 68 RQIGGIILLYSREND------RIIQYLHEQNFPFVLI 98 (292)
T ss_dssp TCCCEEEESCCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHHCCCCEEEE
Confidence 589999997743221 3556667788998644
No 231
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=43.05 E-value=14 Score=35.58 Aligned_cols=29 Identities=34% Similarity=0.568 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
|-++||||- ||||+.+ .+.|.++|++|.+
T Consensus 5 k~vlVTGas-~gIG~ai-----a~~l~~~G~~vv~ 33 (258)
T 3oid_A 5 KCALVTGSS-RGVGKAA-----AIRLAENGYNIVI 33 (258)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEecCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7777754 5667788998865
No 232
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=42.90 E-value=16 Score=34.36 Aligned_cols=31 Identities=32% Similarity=0.473 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 3 k~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~~ 33 (250)
T 2cfc_A 3 RVAIVTGAS-SGNGLAI-----ATRFLARGDRVAALD 33 (250)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999986 7777654 456677899887764
No 233
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=42.88 E-value=14 Score=35.31 Aligned_cols=31 Identities=35% Similarity=0.685 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 3 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 33 (258)
T 3a28_C 3 KVAMVTGGA-QGIGRGI-----SEKLAADGFDIAVAD 33 (258)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHHTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777754 455666799887753
No 234
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=42.85 E-value=14 Score=35.20 Aligned_cols=31 Identities=42% Similarity=0.577 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 10 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~ 40 (248)
T 3op4_A 10 KVALVTGAS-RGIGKA-----IAELLAERGAKVIGTA 40 (248)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4466778899987653
No 235
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=42.83 E-value=14 Score=35.10 Aligned_cols=30 Identities=33% Similarity=0.524 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- +|||+.++ +.|.++|++|.+.
T Consensus 5 k~vlVTGas-~giG~~ia-----~~l~~~G~~V~~~ 34 (246)
T 2uvd_A 5 KVALVTGAS-RGIGRAIA-----IDLAKQGANVVVN 34 (246)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 789999986 78887654 5667789988664
No 236
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=42.80 E-value=14 Score=35.42 Aligned_cols=31 Identities=29% Similarity=0.467 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+.++ +.|-.+|++|.+.=
T Consensus 30 k~vlITGas-~gIG~~la-----~~l~~~G~~V~~~~ 60 (262)
T 3rkr_A 30 QVAVVTGAS-RGIGAAIA-----RKLGSLGARVVLTA 60 (262)
T ss_dssp CEEEESSTT-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHHH-----HHHHHCCCEEEEEE
Confidence 789999985 78887654 56667899887653
No 237
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=42.67 E-value=13 Score=35.54 Aligned_cols=30 Identities=37% Similarity=0.523 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- ||||+. +.+.|-++|++|.+.
T Consensus 10 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~ 39 (257)
T 3tl3_A 10 AVAVVTGGA-SGLGLA-----TTKRLLDAGAQVVVL 39 (257)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHHTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 689999986 777775 455677789998774
No 238
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=42.65 E-value=14 Score=35.61 Aligned_cols=29 Identities=38% Similarity=0.622 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
|-++||||- +|||+. +.+.|-++|++|.+
T Consensus 27 k~vlVTGas-~gIG~~-----la~~l~~~G~~v~i 55 (267)
T 4iiu_A 27 RSVLVTGAS-KGIGRA-----IARQLAADGFNIGV 55 (267)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 789999985 777764 55667788998755
No 239
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=42.62 E-value=15 Score=35.59 Aligned_cols=32 Identities=25% Similarity=0.504 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- ||||+.+ .+.|-.+|++|.+.-.
T Consensus 12 k~~lVTGas-~GIG~a~-----a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITGAA-RGQGRAH-----AVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHcCCEEEEEec
Confidence 789999985 7777654 5667788999988643
No 240
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=42.60 E-value=18 Score=36.21 Aligned_cols=32 Identities=34% Similarity=0.532 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- ||||+.+ .+.|-++|++|.+.=.
T Consensus 9 k~vlVTGas-~gIG~~l-----a~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 9 RTAFVTGGA-NGVGIGL-----VRQLLNQGCKVAIADI 40 (319)
T ss_dssp CEEEEETTT-STHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEcCCc-hHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 689999997 8888754 4566778999877543
No 241
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=42.53 E-value=16 Score=35.29 Aligned_cols=31 Identities=35% Similarity=0.418 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 6 k~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 6 KVWLVTGAS-SGFGRAI-----AEAAVAAGDTVIGTA 36 (281)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999986 7777654 456777899987653
No 242
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=42.47 E-value=14 Score=35.21 Aligned_cols=29 Identities=31% Similarity=0.471 Sum_probs=24.6
Q ss_pred CcchHHHHHHHHHHHHH--CCCeeEEeeecc
Q 008476 13 GLGKGVTASSIGVLLKA--CGLRVTCIKIDP 41 (564)
Q Consensus 13 ~~gkg~~~~s~g~ll~~--~g~~v~~~k~dp 41 (564)
|=|||-|+|++|.-|++ +|+||-++-+++
T Consensus 36 G~GkGKTTaA~GlalRA~g~G~rV~~vQF~K 66 (196)
T 1g5t_A 36 GNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 66 (196)
T ss_dssp SSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEEeeC
Confidence 45899999999998876 689999997776
No 243
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=42.47 E-value=14 Score=36.21 Aligned_cols=31 Identities=39% Similarity=0.636 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- ||||+.+ .+.|-++|++|.+.-
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 64 (281)
T 4dry_A 34 RIALVTGGG-TGVGRGI-----AQALSAEGYSVVITG 64 (281)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEE
Confidence 679999985 7787755 456667899887753
No 244
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=42.39 E-value=17 Score=34.41 Aligned_cols=34 Identities=29% Similarity=0.328 Sum_probs=23.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeec
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKID 40 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~-~g~~v~~~k~d 40 (564)
.|-|+||||- +|||+.++ +.|.. +|++|.+.=.+
T Consensus 4 ~k~vlITGas-ggIG~~~a-----~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIV-----RDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESSCS-SHHHHHHH-----HHHHHHSSSEEEEEESS
T ss_pred CCEEEEeCCC-cHHHHHHH-----HHHHHhcCCeEEEEeCC
Confidence 3789999985 67776543 44555 89988776444
No 245
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=42.33 E-value=14 Score=35.56 Aligned_cols=29 Identities=41% Similarity=0.595 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
|.++||||- ||||+ ++.+.|-.+|++|.+
T Consensus 27 k~vlITGas-~gIG~-----a~a~~l~~~G~~V~~ 55 (272)
T 4e3z_A 27 PVVLVTGGS-RGIGA-----AVCRLAARQGWRVGV 55 (272)
T ss_dssp CEEEETTTT-SHHHH-----HHHHHHHHTTCEEEE
T ss_pred CEEEEECCC-chHHH-----HHHHHHHHCCCEEEE
Confidence 789999984 77776 455677788998754
No 246
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=42.25 E-value=16 Score=34.97 Aligned_cols=31 Identities=26% Similarity=0.507 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.=
T Consensus 13 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 43 (252)
T 3f1l_A 13 RIILVTGAS-DGIGREA-----AMTYARYGATVILLG 43 (252)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 466778899988753
No 247
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=42.18 E-value=17 Score=35.11 Aligned_cols=32 Identities=34% Similarity=0.503 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- ||||+. +.+.|-++|++|.+.-.
T Consensus 31 k~vlVTGas-~GIG~a-----ia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 31 ASAIVSGGA-GGLGEA-----TVRRLHADGLGVVIADL 62 (281)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777765 45667778999887643
No 248
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=42.15 E-value=15 Score=35.61 Aligned_cols=32 Identities=38% Similarity=0.459 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+.+ .+.|..+|++|.+.-.
T Consensus 23 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGAT-SGIGLEI-----ARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 7777754 4567778999877643
No 249
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=42.09 E-value=88 Score=29.88 Aligned_cols=31 Identities=16% Similarity=0.471 Sum_probs=21.3
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+. ..++.+.+.++|+.-+
T Consensus 64 ~~vdGiIi~~~~~~~------~~~~~l~~~~iPvV~~ 94 (294)
T 3qk7_A 64 RRVDALIVAHTQPED------FRLQYLQKQNFPFLAL 94 (294)
T ss_dssp TCCSEEEECSCCSSC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHhCCCCEEEE
Confidence 489999998753322 3456667778888654
No 250
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=42.00 E-value=17 Score=35.11 Aligned_cols=32 Identities=28% Similarity=0.509 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 43 (271)
T 3tzq_B 12 KVAIITGAC-GGIGLE-----TSRVLARAGARVVLADL 43 (271)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEcC
Confidence 789999995 777765 45667788999887643
No 251
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=41.92 E-value=14 Score=35.54 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+.++ +.|.++|++|.+.
T Consensus 12 k~~lVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 41 (276)
T 1mxh_A 12 PAAVITGGA-RRIGHSIA-----VRLHQQGFRVVVH 41 (276)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 679999986 77777554 5566789988765
No 252
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=41.85 E-value=16 Score=35.15 Aligned_cols=31 Identities=42% Similarity=0.703 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+.++ +.|.++|++|.+.-
T Consensus 14 k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~~ 44 (267)
T 1iy8_A 14 RVVLITGGG-SGLGRATA-----VRLAAEGAKLSLVD 44 (267)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEe
Confidence 789999984 88887654 56667899887753
No 253
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=41.84 E-value=23 Score=32.57 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=25.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|| |+||||- ++|| +.+.+.|.++|++|.++-.+|
T Consensus 1 M~-ilItGat-G~iG-----~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MK-IFIVGST-GRVG-----KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CE-EEEESTT-SHHH-----HHHHHHHTTSSCEEEEEESSG
T ss_pred Ce-EEEECCC-CHHH-----HHHHHHHHHCCCEEEEEECCc
Confidence 55 8999975 4555 455667778899999887654
No 254
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=41.78 E-value=25 Score=34.02 Aligned_cols=35 Identities=23% Similarity=0.457 Sum_probs=30.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~-v~~~k 38 (564)
++|.+.|. +|-||+..+.-|...|..+|++ |...+
T Consensus 28 ~~i~~eG~--~GsGKsT~~~~l~~~l~~~~~~~~~~~r 63 (236)
T 3lv8_A 28 KFIVIEGL--EGAGKSTAIQVVVETLQQNGIDHITRTR 63 (236)
T ss_dssp CEEEEEES--TTSCHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCCCeeeeec
Confidence 68999985 7999999999999999999999 54443
No 255
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=41.73 E-value=16 Score=35.48 Aligned_cols=33 Identities=30% Similarity=0.499 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|.++||||- +|||+. +.+.|-++|++|.+.-.+
T Consensus 11 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGA-RGMGRS-----HAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCeEEEEeCC
Confidence 789999986 777765 456777889999876544
No 256
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=41.72 E-value=15 Score=35.47 Aligned_cols=32 Identities=31% Similarity=0.654 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 11 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 11 RSVVVTGGT-KGIGRGI-----ATVFARAGANVAVAGR 42 (262)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7777754 5667788998877643
No 257
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=41.72 E-value=40 Score=30.83 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=46.3
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccC
Q 008476 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDD 63 (564)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~d 63 (564)
-++++|- +|.||=..+..++..+...|++|..+..+.+.+.-...+.-+....|.+.||
T Consensus 54 ~~ll~G~--~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vliiDe 112 (242)
T 3bos_A 54 AIYLWGP--VKSGRTHLIHAACARANELERRSFYIPLGIHASISTALLEGLEQFDLICIDD 112 (242)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGGGSCGGGGTTGGGSSEEEEET
T ss_pred eEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHHhccCCCEEEEec
Confidence 4778886 6999999999999999999999999888776654444445555567777776
No 258
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=41.62 E-value=20 Score=34.89 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-++||||- +|||+.++ +.|.++|++|.+.-.+
T Consensus 22 k~vlVTGas-~gIG~aia-----~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGAT-SGFGEACA-----RRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTT-TSSHHHHH-----HHHHHTTCEEEEEESC
T ss_pred cEEEEeCCC-CHHHHHHH-----HHHHHCCCEEEEEECC
Confidence 679999984 89998654 5577789998876443
No 259
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=41.55 E-value=16 Score=34.56 Aligned_cols=31 Identities=29% Similarity=0.375 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+ ++.+.|.++|++|.+.-
T Consensus 10 k~vlITGas-~giG~-----~~a~~l~~~G~~V~~~~ 40 (253)
T 3qiv_A 10 KVGIVTGSG-GGIGQ-----AYAEALAREGAAVVVAD 40 (253)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHH-----HHHHHHHHCCCEEEEEc
Confidence 789999984 77776 45567778899988753
No 260
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=41.50 E-value=16 Score=35.67 Aligned_cols=31 Identities=32% Similarity=0.535 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 28 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~ 58 (277)
T 4dqx_A 28 RVCIVTGGG-SGIGRA-----TAELFAKNGAYVVVAD 58 (277)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4566778899988753
No 261
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=41.41 E-value=50 Score=29.94 Aligned_cols=47 Identities=28% Similarity=0.444 Sum_probs=34.3
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 008476 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (564)
Q Consensus 111 vqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggt-vgdies~pf~ea~rq~ 166 (564)
..+||.=-++|++.|++..+ ..++|++|+ .||| +|+-.=.| ||++++
T Consensus 49 ~~iv~Dd~~~i~~~l~~~~~------~~~~DlVit-tGG~g~g~~D~t~--~a~~~~ 96 (167)
T 1uuy_A 49 TAVVPDEVERIKDILQKWSD------VDEMDLILT-LGGTGFTPRDVTP--EATKKV 96 (167)
T ss_dssp EEEECSCHHHHHHHHHHHHH------TSCCSEEEE-ESCCSSSTTCCHH--HHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHh------cCCCCEEEE-CCCCCCCCCCchH--HHHHHH
Confidence 45788878899999998862 236898766 7887 66544445 899887
No 262
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=41.33 E-value=16 Score=35.49 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|.++||||- ||||+. +.+.|-.+|++|.+.-.+
T Consensus 12 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 12 KVAFVTGAA-RGQGRS-----HAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCeEEEEecc
Confidence 789999996 677764 556777889999887544
No 263
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=41.18 E-value=15 Score=36.08 Aligned_cols=31 Identities=32% Similarity=0.353 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.=
T Consensus 10 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAA-KRLGRSI-----AEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCeEEEEc
Confidence 789999985 7888754 556778899987753
No 264
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=41.09 E-value=20 Score=34.16 Aligned_cols=31 Identities=23% Similarity=0.305 Sum_probs=24.0
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv-~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.|+||||- -+|||+.+ .+.|..+|++|.+.
T Consensus 15 k~vlITGa~~~~giG~~i-----a~~l~~~G~~V~~~ 46 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGI-----AKACKREGAELAFT 46 (271)
T ss_dssp CEEEECCCCSTTSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCCCCCcHHHHH-----HHHHHHcCCCEEEE
Confidence 789999995 37899865 45667789988765
No 265
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=41.04 E-value=17 Score=34.28 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 12 k~vlITGas-ggiG~~-----la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 12 ACAAVTGAG-SGIGLE-----ICRAFAASGARLILID 42 (254)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 689999985 677764 4566777899888763
No 266
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=40.98 E-value=17 Score=34.78 Aligned_cols=32 Identities=34% Similarity=0.406 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++|||| -+|||+.+ .+.|.++|++|.+.-.
T Consensus 10 k~vlVTGa-s~giG~~i-----a~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 10 CTALVTGG-SRGIGYGI-----VEELASLGASVYTCSR 41 (260)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CcHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47777654 4566678998877643
No 267
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=40.97 E-value=17 Score=34.43 Aligned_cols=30 Identities=37% Similarity=0.589 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-|+||||- +|||+. +.+.|.++|++|.++
T Consensus 15 k~vlITGas-ggiG~~-----~a~~l~~~G~~V~~~ 44 (265)
T 1h5q_A 15 KTIIVTGGN-RGIGLA-----FTRAVAAAGANVAVI 44 (265)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTEEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCeEEEE
Confidence 789999984 777764 455666789887765
No 268
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=40.96 E-value=16 Score=35.18 Aligned_cols=32 Identities=28% Similarity=0.505 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- +|||+. +.+.|-.+|++|.+.-.
T Consensus 14 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 45 (278)
T 3sx2_A 14 KVAFITGAA-RGQGRA-----HAVRLAADGADIIAVDL 45 (278)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCeEEEEec
Confidence 789999985 777765 45667788999987643
No 269
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=40.95 E-value=18 Score=35.24 Aligned_cols=30 Identities=30% Similarity=0.570 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+. +.+.|.++|++|.+.
T Consensus 33 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~ 62 (276)
T 3r1i_A 33 KRALITGAS-TGIGKK-----VALAYAEAGAQVAVA 62 (276)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999996 788765 456677889998775
No 270
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=40.95 E-value=16 Score=35.94 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|.++||||- ||||+. +.+.|-++|++|.+.-.++
T Consensus 29 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~~~~~ 62 (299)
T 3t7c_A 29 KVAFITGAA-RGQGRS-----HAITLAREGADIIAIDVCK 62 (299)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECCS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeccc
Confidence 789999985 777764 4566778899998865443
No 271
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=40.95 E-value=15 Score=34.63 Aligned_cols=30 Identities=33% Similarity=0.455 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- ||||+.+ .+.|-++|++|.++
T Consensus 8 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~~ 37 (255)
T 3icc_A 8 KVALVTGAS-RGIGRAI-----AKRLANDGALVAIH 37 (255)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCeEEEE
Confidence 789999996 7777654 45567789887653
No 272
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=40.90 E-value=19 Score=34.17 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.|+||||- +|||+.+ .+.|.++|++|.++-.
T Consensus 13 k~vlVTGas-ggiG~~~-----a~~l~~~G~~V~~~~r 44 (265)
T 2o23_A 13 LVAVITGGA-SGLGLAT-----AERLVGQGASAVLLDL 44 (265)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999994 7777654 4567778999887643
No 273
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=40.76 E-value=1.1e+02 Score=30.71 Aligned_cols=40 Identities=38% Similarity=0.532 Sum_probs=34.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (564)
+.|.++| -.|-||=.....|..++...|.+|.++-.||.-
T Consensus 57 ~~i~i~G--~~g~GKSTl~~~l~~~~~~~~~~v~v~~~d~~~ 96 (341)
T 2p67_A 57 LRLGVTG--TPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 96 (341)
T ss_dssp EEEEEEE--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred EEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEeecCCc
Confidence 4567777 899999999999999999999999999888864
No 274
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=40.75 E-value=16 Score=35.99 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- ||||+. +.+.|-++|++|.+.
T Consensus 32 k~vlVTGas-~gIG~~-----la~~l~~~G~~V~~~ 61 (301)
T 3tjr_A 32 RAAVVTGGA-SGIGLA-----TATEFARRGARLVLS 61 (301)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 689999997 778775 456677889988775
No 275
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=40.67 E-value=17 Score=35.45 Aligned_cols=33 Identities=33% Similarity=0.361 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 17 k~vlVTGas-~gIG~~~-----a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITGAN-SGLGAVT-----ARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEECCS-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEECC
Confidence 679999997 7777654 46677889998876443
No 276
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=40.62 E-value=14 Score=35.67 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 28 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGAS-QRVGLH-----CALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTT-SHHHHH-----HHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999985 777764 456677789998876443
No 277
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=40.59 E-value=17 Score=35.41 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 32 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 61 (271)
T 3v2g_A 32 KTAFVTGGS-RGIGAAI-----AKRLALEGAAVALT 61 (271)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7777754 46677789988654
No 278
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.56 E-value=15 Score=35.32 Aligned_cols=32 Identities=31% Similarity=0.536 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.=.
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSS-NGIGRAT-----AVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999986 7777754 4566778999887643
No 279
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=40.50 E-value=18 Score=34.87 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 29 KVVVITGAS-QGIGAG-----LVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 789999985 777764 445677889999887543
No 280
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=40.48 E-value=16 Score=34.23 Aligned_cols=29 Identities=38% Similarity=0.599 Sum_probs=21.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
|.|+||||- +|||+. +.+.|.++|++|.+
T Consensus 2 k~vlVTGas-ggiG~~-----la~~l~~~G~~v~~ 30 (244)
T 1edo_A 2 PVVVVTGAS-RGIGKA-----IALSLGKAGCKVLV 30 (244)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCEEEE
Confidence 679999985 677764 45667778998876
No 281
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=40.46 E-value=16 Score=35.58 Aligned_cols=30 Identities=27% Similarity=0.463 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- ||||+.+ .+.|-++|++|.+.
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 58 (270)
T 3ftp_A 29 QVAIVTGAS-RGIGRAI-----ALELARRGAMVIGT 58 (270)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7777654 46677889988765
No 282
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=40.38 E-value=16 Score=34.88 Aligned_cols=31 Identities=29% Similarity=0.520 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (260)
T 2qq5_A 6 QVCVVTGAS-RGIGRGI-----ALQLCKAGATVYITG 36 (260)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 456777899887753
No 283
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=40.26 E-value=18 Score=34.59 Aligned_cols=34 Identities=32% Similarity=0.391 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|-|+||||- +|||+.+ .+.|.++|++|.+.-.++
T Consensus 20 k~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 20 KGVLVLAAS-RGIGRAV-----ADVLSQEGAEVTICARNE 53 (249)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEcCCH
Confidence 679999995 7777754 456777899998875554
No 284
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=39.98 E-value=41 Score=29.59 Aligned_cols=74 Identities=9% Similarity=0.131 Sum_probs=39.6
Q ss_pred hHhhHHHHhhhhcCCCCCCeeEEc-----ccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc----CcchHHH
Q 008476 91 GKIYQSVIDKERKGDYLGKTVQVV-----PHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI----ESMPFIE 161 (564)
Q Consensus 91 g~iy~~vi~ker~g~ylg~tvqvi-----ph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdi----es~pf~e 161 (564)
++-|...+.+.=... |..++|+ =.-|....+++..... ..+||+|+|++|+ .|+ ...-|.+
T Consensus 21 ~~~~~~~l~~~l~~~--~~~~~v~n~g~~G~~~~~~~~~~~~~~~------~~~pd~vvi~~G~--ND~~~~~~~~~~~~ 90 (185)
T 3hp4_A 21 EEGWVKLLQDKYDAE--QSDIVLINASISGETSGGALRRLDALLE------QYEPTHVLIELGA--NDGLRGFPVKKMQT 90 (185)
T ss_dssp GGSHHHHHHHHHHHT--TCCEEEEECCCTTCCHHHHHHHHHHHHH------HHCCSEEEEECCH--HHHHTTCCHHHHHH
T ss_pred cccHHHHHHHHHHhc--CCcEEEEECCcCCccHHHHHHHHHHHHh------hcCCCEEEEEeec--ccCCCCcCHHHHHH
Confidence 356666666542222 4555554 1234455556655431 2378999999995 343 2234555
Q ss_pred HHHHhhhhcCCCC
Q 008476 162 ALGQFSYRVGPGN 174 (564)
Q Consensus 162 a~rq~~~~~~~~~ 174 (564)
.+++|-..+...+
T Consensus 91 ~~~~~i~~~~~~~ 103 (185)
T 3hp4_A 91 NLTALVKKSQAAN 103 (185)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 5555554444333
No 285
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=39.80 E-value=18 Score=34.62 Aligned_cols=31 Identities=29% Similarity=0.545 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 13 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 43 (263)
T 3ak4_A 13 RKAIVTGGS-KGIGAAI-----ARALDKAGATVAIAD 43 (263)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999985 6777654 456777899988753
No 286
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=39.74 E-value=18 Score=34.51 Aligned_cols=31 Identities=39% Similarity=0.530 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 3 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 33 (256)
T 1geg_A 3 KVALVTGAG-QGIGKA-----IALRLVKDGFAVAIAD 33 (256)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4566777899887753
No 287
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=39.64 E-value=20 Score=35.24 Aligned_cols=32 Identities=31% Similarity=0.608 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 48 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~r 79 (291)
T 3ijr_A 48 KNVLITGGD-SGIGRA-----VSIAFAKEGANIAIAYL 79 (291)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777764 45667788999877533
No 288
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=39.57 E-value=22 Score=34.01 Aligned_cols=33 Identities=27% Similarity=0.237 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||-=||||+. +.+.|..+|++|.+.-.
T Consensus 23 k~vlITGasg~GIG~~-----~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 23 KVVLVTAAAGTGIGST-----TARRALLEGADVVISDY 55 (266)
T ss_dssp CEEEESSCSSSSHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCchHHH-----HHHHHHHCCCEEEEecC
Confidence 7899999976788875 45667778999887644
No 289
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=39.35 E-value=15 Score=35.38 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- ||||+.+ .+.|-++|++|.+.
T Consensus 12 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGGI-KNLGALT-----AKTFALESVNLVLH 41 (262)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHTTSSCEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 789999996 7777654 56677889988764
No 290
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=39.34 E-value=15 Score=38.58 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=26.7
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCC-CEEEEehh
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRI-PYLGICLG 400 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~i-PiLGICLG 400 (564)
.++|-||+-||-|. ++.+++.+...++ |++||=+|
T Consensus 113 ~~~DlVIvlGGDGT-----lL~aa~~~~~~~vpPiLGIN~G 148 (388)
T 3afo_A 113 NRTDLLVTLGGDGT-----ILHGVSMFGNTQVPPVLAFALG 148 (388)
T ss_dssp HHCSEEEEEESHHH-----HHHHHHTTTTSCCCCEEEEECS
T ss_pred cCCCEEEEEeCcHH-----HHHHHHHhcccCCCeEEEEECC
Confidence 46899999997442 5566777666678 89999877
No 291
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=39.29 E-value=18 Score=34.47 Aligned_cols=30 Identities=40% Similarity=0.598 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+. +.+.|.++|++|.+.
T Consensus 5 k~vlVTGas-~giG~~-----ia~~l~~~G~~V~~~ 34 (255)
T 2q2v_A 5 KTALVTGST-SGIGLG-----IAQVLARAGANIVLN 34 (255)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 779999985 777765 445677789988764
No 292
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=39.23 E-value=18 Score=35.33 Aligned_cols=31 Identities=32% Similarity=0.536 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- ||||+.+ .+.|.++|++|.+.-
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 59 (283)
T 3v8b_A 29 PVALITGAG-SGIGRAT-----ALALAADGVTVGALG 59 (283)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999985 6777654 466778899887753
No 293
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=39.22 E-value=18 Score=34.98 Aligned_cols=32 Identities=38% Similarity=0.537 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 10 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 10 KVVVVTGGG-RGIGAGI-----VRAFVNSGARVVICDK 41 (270)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999985 6777654 4667788999887643
No 294
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=39.13 E-value=30 Score=32.83 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=28.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~-~v~~ 36 (564)
+||.+.|. +|-||+..+..|...|+.+|+ .|..
T Consensus 4 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~~v~~ 37 (213)
T 4tmk_A 4 KYIVIEGL--EGAGKTTARNVVVETLEQLGIRDMVF 37 (213)
T ss_dssp CEEEEEEC--TTSCHHHHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCCccee
Confidence 68999985 799999999999999999998 5543
No 295
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=39.08 E-value=19 Score=34.49 Aligned_cols=31 Identities=35% Similarity=0.461 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+. +.+.|.++|++|.+.=
T Consensus 8 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 38 (260)
T 2z1n_A 8 KLAVVTAGS-SGLGFA-----SALELARNGARLLLFS 38 (260)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEe
Confidence 689999985 777765 4456777899887753
No 296
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=39.07 E-value=18 Score=35.18 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 32 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 61 (273)
T 3uf0_A 32 RTAVVTGAG-SGIGRAI-----AHGYARAGAHVLAW 61 (273)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999995 7777654 45677889988664
No 297
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=39.03 E-value=1.3e+02 Score=28.51 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=20.6
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
.++||||+.+.... . ..++.+.+.++|+.-+.
T Consensus 71 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 102 (289)
T 2fep_A 71 KQVDGIVFMGGNIT---D---EHVAEFKRSPVPIVLAA 102 (289)
T ss_dssp TTCSEEEECCSCCC---H---HHHHHHHHSSSCEEEES
T ss_pred CCCCEEEEecCCCC---H---HHHHHHHhcCCCEEEEc
Confidence 58999999774221 1 23455567789987653
No 298
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=38.85 E-value=19 Score=34.47 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 9 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 39 (259)
T 4e6p_A 9 KSALITGSA-RGIGRA-----FAEAYVREGATVAIAD 39 (259)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999985 777765 4566778899988763
No 299
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=38.80 E-value=18 Score=34.58 Aligned_cols=30 Identities=37% Similarity=0.551 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 5 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 34 (260)
T 1x1t_A 5 KVAVVTGST-SGIGLGI-----ATALAAQGADIVLN 34 (260)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999984 7777654 45677789988775
No 300
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=38.76 E-value=19 Score=35.09 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|.++||||- ||||+.+ .+.|.++|++|.+.=.+
T Consensus 10 k~vlVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 10 KTMFISGGS-RGIGLAI-----AKRVAADGANVALVAKS 42 (285)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHTTTCEEEEEESC
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 789999986 7787754 56677889988776443
No 301
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=38.74 E-value=21 Score=35.00 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- ||||+.+ .+.|-+.|.+|.+.
T Consensus 8 KvalVTGas-~GIG~ai-----a~~la~~Ga~Vv~~ 37 (258)
T 4gkb_A 8 KVVIVTGGA-SGIGGAI-----SMRLAEERAIPVVF 37 (258)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999985 8888765 46677888887664
No 302
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=38.73 E-value=17 Score=35.46 Aligned_cols=32 Identities=28% Similarity=0.417 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+.++ +.|.++|++|.+.-.
T Consensus 24 k~~lVTGas-~gIG~aia-----~~L~~~G~~V~~~~r 55 (288)
T 2x9g_A 24 PAAVVTGAA-KRIGRAIA-----VKLHQTGYRVVIHYH 55 (288)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHHTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHHH-----HHHHHCCCeEEEEeC
Confidence 679999986 78887654 556677998877543
No 303
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=38.70 E-value=60 Score=31.76 Aligned_cols=66 Identities=15% Similarity=0.170 Sum_probs=43.1
Q ss_pred CceEEEEEeccCCCc---chHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEeCC
Q 008476 296 EPVRIAMVGKYTGLS---DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPG 370 (564)
Q Consensus 296 ~~~~IavVGkY~~~~---Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIllpG 370 (564)
+.+||||+ .+.++. +++..+.+.|+..|+....++++.+-++. .|++.-....+.+ +++|.|+..|
T Consensus 7 ~~~~igi~-q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~--------gd~~~~~~~~~~l~~~~~DlIiai~ 77 (302)
T 3lkv_A 7 KTAKVAVS-QIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQ--------GNPAIAVQIARQFVGENPDVLVGIA 77 (302)
T ss_dssp CCEEEEEE-ESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECT--------TCHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCceEEEE-EeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCC--------CCHHHHHHHHHHHHhcCCcEEEEcC
Confidence 56899999 787653 34668899999999876655666666553 2333333333333 5899887543
No 304
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=38.62 E-value=19 Score=35.25 Aligned_cols=30 Identities=43% Similarity=0.725 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- ||||+.| .+.|-+.|.+|.+.
T Consensus 10 KvalVTGas-~GIG~ai-----A~~la~~Ga~Vvi~ 39 (247)
T 4hp8_A 10 RKALVTGAN-TGLGQAI-----AVGLAAAGAEVVCA 39 (247)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCcC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 679999985 8888865 47788999999765
No 305
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=38.51 E-value=19 Score=34.14 Aligned_cols=32 Identities=34% Similarity=0.574 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- +|||+.++ +.|.++|++|.+.-.
T Consensus 6 k~vlVTGas-~giG~~ia-----~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGAA-HGIGRATL-----ELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEeC
Confidence 789999984 77777654 566778999887643
No 306
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=38.50 E-value=19 Score=34.92 Aligned_cols=33 Identities=42% Similarity=0.614 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-++||||- +|||+. +.+.|-++|++|.+.-.+
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 12 RTYLVTGGG-SGIGKG-----VAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999984 777765 456677889998776433
No 307
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=38.44 E-value=19 Score=35.32 Aligned_cols=32 Identities=28% Similarity=0.463 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- ||||+.+ .+.|-+.|.+|.+.-.
T Consensus 8 KvalVTGas-~GIG~ai-----A~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 8 KVVIVTGAG-SGIGRAI-----AKKFALNDSIVVAVEL 39 (254)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHcCCEEEEEEC
Confidence 789999984 7888765 4667788999877544
No 308
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=38.25 E-value=19 Score=34.97 Aligned_cols=31 Identities=35% Similarity=0.407 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 25 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 55 (279)
T 3sju_A 25 QTAFVTGVS-SGIGLAV-----ARTLAARGIAVYGCA 55 (279)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 456667899887654
No 309
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=38.23 E-value=19 Score=34.53 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- ||||+. +.+.|-++|++|.+.
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~ 38 (259)
T 3edm_A 9 RTIVVAGAG-RDIGRA-----CAIRFAQEGANVVLT 38 (259)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEE
Confidence 689999985 677765 456677789988664
No 310
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=38.19 E-value=19 Score=35.12 Aligned_cols=30 Identities=30% Similarity=0.465 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+. +.+.|-++|++|.+.
T Consensus 26 k~~lVTGas-~GIG~~-----ia~~la~~G~~V~~~ 55 (281)
T 3v2h_A 26 KTAVITGST-SGIGLA-----IARTLAKAGANIVLN 55 (281)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 777764 456677889988763
No 311
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=38.15 E-value=18 Score=35.05 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.|+||||- +|||+.++ +.|.++|++|.+.-.
T Consensus 29 k~vlITGas-ggIG~~la-----~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 29 KKVIVTGAS-KGIGREMA-----YHLAKMGAHVVVTAR 60 (286)
T ss_dssp CEEEESSCS-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEEEC
Confidence 679999985 77777554 566778999887643
No 312
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=38.11 E-value=18 Score=34.88 Aligned_cols=29 Identities=41% Similarity=0.568 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
|-++||||- ||||+.+ .+.|.++|++|.+
T Consensus 19 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~ 47 (270)
T 3is3_A 19 KVALVTGSG-RGIGAAV-----AVHLGRLGAKVVV 47 (270)
T ss_dssp CEEEESCTT-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7777654 5667788998876
No 313
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=38.03 E-value=23 Score=35.01 Aligned_cols=33 Identities=33% Similarity=0.419 Sum_probs=25.9
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv-~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- -||||+.++ +.|..+|++|.+.-.
T Consensus 10 k~~lVTGa~~s~GIG~aia-----~~la~~G~~Vv~~~r 43 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAIC-----KLLRAAGARVLVGTW 43 (319)
T ss_dssp CEEEEECCCCTTSHHHHHH-----HHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCCCCcHHHHHH-----HHHHHCCCEEEEEec
Confidence 689999995 899998654 567778999887643
No 314
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=37.99 E-value=19 Score=35.51 Aligned_cols=33 Identities=33% Similarity=0.669 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-++||||- +|||+.+ .+.|..+|++|.+.-.+
T Consensus 42 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 42 RSVLVTGGT-KGIGRGI-----ATVFARAGANVAVAARS 74 (293)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 679999995 7777754 46677889998876443
No 315
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=37.98 E-value=18 Score=35.42 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- ||||+. +.+.|-+.|.+|.+.-
T Consensus 12 K~alVTGas-~GIG~a-----ia~~la~~Ga~V~~~~ 42 (261)
T 4h15_A 12 KRALITAGT-KGAGAA-----TVSLFLELGAQVLTTA 42 (261)
T ss_dssp CEEEESCCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeccC-cHHHHH-----HHHHHHHcCCEEEEEE
Confidence 789999984 788875 4567889999997753
No 316
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=37.93 E-value=32 Score=32.15 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=26.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH--CCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA--CGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~--~g~~v~~~k 38 (564)
|.+|+||- -|+|-|++.++++... +|++|-++|
T Consensus 9 ~i~v~~G~----mgsGKTT~ll~~a~r~~~~g~kV~v~k 43 (191)
T 1xx6_A 9 WVEVIVGP----MYSGKSEELIRRIRRAKIAKQKIQVFK 43 (191)
T ss_dssp EEEEEECS----TTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECC----CCCcHHHHHHHHHHHHHHCCCEEEEEE
Confidence 56777774 3667788888887665 999999998
No 317
>2vos_A Folylpolyglutamate synthase protein FOLC; ligase, peptidoglycan synthesis, cell division; HET: ADP; 2.0A {Mycobacterium tuberculosis} PDB: 2vor_A*
Probab=37.93 E-value=28 Score=37.26 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=27.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
|.|-|||- =|||-|++=|..+|++.|++|-.
T Consensus 65 ~vI~VtGT----NGKtST~~~l~~iL~~~G~~vG~ 95 (487)
T 2vos_A 65 PSIHIAGT----NGKTSVARMVDALVTALHRRTGR 95 (487)
T ss_dssp CEEEEECS----SSHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEeCC----CCcHHHHHHHHHHHHHcCCCeEE
Confidence 57888984 69999999999999999999853
No 318
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=37.79 E-value=18 Score=34.28 Aligned_cols=29 Identities=38% Similarity=0.604 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
|-++||||- +|||+. +.+.|-++|++|.+
T Consensus 5 k~~lVTGas-~gIG~~-----ia~~l~~~G~~V~~ 33 (246)
T 3osu_A 5 KSALVTGAS-RGIGRS-----IALQLAEEGYNVAV 33 (246)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 789999985 777765 45667788998765
No 319
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=37.63 E-value=35 Score=30.86 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRV 34 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v 34 (564)
+.|+++|. +|-||+..+..|...|...| +|
T Consensus 5 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g-~~ 34 (213)
T 2plr_A 5 VLIAFEGI--DGSGKSSQATLLKDWIELKR-DV 34 (213)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHTTTS-CE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhhcC-CE
Confidence 68999996 88899999999998887766 54
No 320
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=37.57 E-value=15 Score=36.00 Aligned_cols=30 Identities=43% Similarity=0.459 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- ||||+. +.+.|-+.|.+|.+.
T Consensus 10 KvalVTGas-~GIG~a-----ia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 10 KTALVTGSA-RGLGFA-----YAEGLAAAGARVILN 39 (255)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999986 788876 457788899988764
No 321
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=37.39 E-value=1e+02 Score=28.56 Aligned_cols=32 Identities=13% Similarity=0.257 Sum_probs=20.4
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+..... ...++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~~-----~~~~~~~~~~~iPvV~~ 88 (272)
T 3o74_A 57 RRCDALFVASCLPPE-----DDSYRELQDKGLPVIAI 88 (272)
T ss_dssp TTCSEEEECCCCCSS-----CCHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCcccc-----HHHHHHHHHcCCCEEEE
Confidence 589999998753221 12345566778898644
No 322
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=37.34 E-value=19 Score=34.94 Aligned_cols=30 Identities=27% Similarity=0.452 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 28 k~~lVTGas-~GIG~ai-----a~~l~~~G~~V~~~ 57 (277)
T 4fc7_A 28 KVAFITGGG-SGIGFRI-----AEIFMRHGCHTVIA 57 (277)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHTTTCEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 789999995 7777655 45666789988775
No 323
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=37.28 E-value=21 Score=33.24 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g--~~v~~~k~d 40 (564)
|.|+||||- +|||+.+ .+.|..+| ++|.++-.+
T Consensus 4 k~vlItGas-ggiG~~l-----a~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 4 GSVVVTGAN-RGIGLGL-----VQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp SEEEESSCS-SHHHHHH-----HHHHHTCTTCCEEEEEESS
T ss_pred CEEEEecCC-chHHHHH-----HHHHHhcCCCcEEEEEecC
Confidence 689999984 7777654 45666788 888876544
No 324
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=37.12 E-value=17 Score=36.42 Aligned_cols=30 Identities=33% Similarity=0.475 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+.+ .+.|..+|++|.+.
T Consensus 10 k~~lVTGas-~GIG~~~-----a~~La~~Ga~Vv~~ 39 (319)
T 1gz6_A 10 RVVLVTGAG-GGLGRAY-----ALAFAERGALVVVN 39 (319)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 8888765 46677789988774
No 325
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=37.06 E-value=32 Score=31.43 Aligned_cols=45 Identities=24% Similarity=0.326 Sum_probs=33.7
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 008476 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (564)
Q Consensus 111 vqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggt-vgdies~pf~ea~rq~ 166 (564)
..+||-= ++|++.|++..+ .++|++|+ .||| +|+--=.| ||++++
T Consensus 46 ~~iv~Dd-~~i~~al~~a~~-------~~~DlVit-tGG~s~g~~D~t~--eal~~~ 91 (164)
T 3pzy_A 46 PEVVADG-SPVGEALRKAID-------DDVDVILT-SGGTGIAPTDSTP--DQTVAV 91 (164)
T ss_dssp CEEECSS-HHHHHHHHHHHH-------TTCSEEEE-ESCCSSSTTCCHH--HHHHTT
T ss_pred EEEeCCH-HHHHHHHHHHHh-------CCCCEEEE-CCCCCCCCCccHH--HHHHHH
Confidence 4688888 899999988752 36898887 7887 67655555 888876
No 326
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=37.05 E-value=21 Score=34.45 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-|+||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 32 k~vlITGas-ggIG~~-----la~~L~~~G~~V~~~~r 63 (272)
T 1yb1_A 32 EIVLITGAG-HGIGRL-----TAYEFAKLKSKLVLWDI 63 (272)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEEc
Confidence 679999985 677764 45667778999877643
No 327
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=37.02 E-value=20 Score=34.19 Aligned_cols=31 Identities=32% Similarity=0.389 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 15 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 45 (260)
T 2zat_A 15 KVALVTAST-DGIGLA-----IARRLAQDGAHVVVSS 45 (260)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 689999984 677765 4556777899887753
No 328
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=36.93 E-value=18 Score=35.04 Aligned_cols=30 Identities=40% Similarity=0.629 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+. +.+.|.++|++|.+.
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~ 58 (266)
T 3uxy_A 29 KVALVTGAA-GGIGGA-----VVTALRAAGARVAVA 58 (266)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 677764 456677889999875
No 329
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=36.90 E-value=28 Score=33.91 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=29.9
Q ss_pred cCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 11 VSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 11 ~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
-.|.||=.+|.++|..|..+|++|-++-+||-
T Consensus 14 kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q 45 (228)
T 2r8r_A 14 APGVGKTYAMLQAAHAQLRQGVRVMAGVVETH 45 (228)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCCT
T ss_pred CCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 47999999999999999999999999999985
No 330
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=36.84 E-value=1.5e+02 Score=29.02 Aligned_cols=84 Identities=15% Similarity=0.162 Sum_probs=44.4
Q ss_pred CceEEEEEeccCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEeCCCC
Q 008476 296 EPVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (564)
Q Consensus 296 ~~~~IavVGkY~~~~D-ay~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIllpGGf 372 (564)
+..+||++=.. ..+ -|..+++.++.+..+....+.+...+. + ++.-.+..+.+ .++||||+.+..
T Consensus 67 ~~~~Ig~i~~~--~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~-~---------~~~~~~~i~~l~~~~vdGiIi~~~~ 134 (344)
T 3kjx_A 67 RVNLVAVIIPS--LSNMVFPEVLTGINQVLEDTELQPVVGVTDY-L---------PEKEEKVLYEMLSWRPSGVIIAGLE 134 (344)
T ss_dssp CCSEEEEEESC--SSSSSHHHHHHHHHHHHTSSSSEEEEEECTT-C---------HHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEEeCC--CCcHHHHHHHHHHHHHHHHCCCEEEEEeCCC-C---------HHHHHHHHHHHHhCCCCEEEEECCC
Confidence 35689988322 222 345666666666555544433332221 1 11111122222 579999998633
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 373 G~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.+ . ..++.+.+.++|+.-+
T Consensus 135 ~~---~---~~~~~l~~~~iPvV~i 153 (344)
T 3kjx_A 135 HS---E---AARAMLDAAGIPVVEI 153 (344)
T ss_dssp CC---H---HHHHHHHHCSSCEEEE
T ss_pred CC---H---HHHHHHHhCCCCEEEE
Confidence 22 1 3456667788998755
No 331
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=36.76 E-value=33 Score=33.21 Aligned_cols=30 Identities=30% Similarity=0.437 Sum_probs=23.5
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 4 i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|+||||- |-+.+.|.+.|.++|++|..+-.
T Consensus 3 vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 32 (312)
T 3ko8_A 3 IVVTGGA------GFIGSHLVDKLVELGYEVVVVDN 32 (312)
T ss_dssp EEEETTT------SHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEECCC------ChHHHHHHHHHHhCCCEEEEEeC
Confidence 8999974 55666777788889999988744
No 332
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=36.73 E-value=20 Score=34.17 Aligned_cols=31 Identities=39% Similarity=0.548 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (254)
T 1hdc_A 6 KTVIITGGA-RGLGAEA-----ARQAVAAGARVVLAD 36 (254)
T ss_dssp SEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 6777654 456778899987753
No 333
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=36.68 E-value=18 Score=35.18 Aligned_cols=31 Identities=35% Similarity=0.595 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.|+||||- +|||+.++ +.|.++|++|.+.-
T Consensus 45 k~vlITGas-ggIG~~la-----~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 45 KVALVTGAG-RGIGREIA-----KMLAKSVSHVICIS 75 (285)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHTTTSSEEEEEE
T ss_pred CEEEEECCC-cHHHHHHH-----HHHHHcCCEEEEEc
Confidence 679999986 77877554 56667899887743
No 334
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=36.62 E-value=21 Score=35.43 Aligned_cols=62 Identities=27% Similarity=0.436 Sum_probs=43.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEEee--ecccccCCCCCCCccccceEEEccCCccccCCC
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTCIK--IDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDL 71 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~-~v~~~k--~dpyln~d~gtm~p~~hgev~v~~dg~e~dldl 71 (564)
++|+.+.| |+.|+....+|+..|| +|..++ +.-|..-=+.. .+.-.|++||-|+=--++-+|
T Consensus 183 ~IVvyC~~-------G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~~~-~~~w~G~~fVFD~R~~~~~~l 247 (265)
T 4f67_A 183 KIAMFCTG-------GIRCEKTTAYMKELGFEHVYQLHDGILNYLESIPES-ESLWEGKCFVFDDRVAVDQKL 247 (265)
T ss_dssp CEEEECSS-------SHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSCTT-TCCEEECEECSSTTCEECTTS
T ss_pred eEEEEeCC-------ChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcCcc-cccccCcceeEcCccccccCH
Confidence 45666643 6778888999999999 587765 44454322222 345579999999988777766
No 335
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=36.57 E-value=26 Score=33.65 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 12 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 42 (264)
T 3ucx_A 12 KVVVISGVG-PALGTTL-----ARRCAEQGADLVLAA 42 (264)
T ss_dssp CEEEEESCC-TTHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEEe
Confidence 789999994 7888755 456777899987753
No 336
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=36.56 E-value=19 Score=34.61 Aligned_cols=29 Identities=34% Similarity=0.678 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
|.++||||- +|||+.+ .+.|..+|++|.+
T Consensus 26 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~ 54 (269)
T 3gk3_A 26 RVAFVTGGM-GGLGAAI-----SRRLHDAGMAVAV 54 (269)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999986 8888755 4667788998865
No 337
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=36.52 E-value=22 Score=33.75 Aligned_cols=32 Identities=41% Similarity=0.571 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 3 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 3 RGVIVTGGG-HGIGKQ-----ICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999986 677765 45667788999988643
No 338
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=36.38 E-value=29 Score=33.33 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=25.0
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv-~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- -+|||+.++ +.|.++|++|.+.=
T Consensus 8 k~vlVTGa~~s~gIG~aia-----~~l~~~G~~V~~~~ 40 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIA-----RVAQEQGAQLVLTG 40 (269)
T ss_dssp CEEEECCCSSTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCchHHHHH-----HHHHHCCCEEEEEe
Confidence 689999994 789998654 56777899887753
No 339
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=36.22 E-value=19 Score=35.80 Aligned_cols=31 Identities=32% Similarity=0.521 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 28 k~vlVTGas-~GIG~ai-----a~~la~~G~~Vv~~~ 58 (322)
T 3qlj_A 28 RVVIVTGAG-GGIGRAH-----ALAFAAEGARVVVND 58 (322)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEC
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999986 7888754 456677899888753
No 340
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=36.21 E-value=22 Score=34.33 Aligned_cols=32 Identities=34% Similarity=0.421 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++|||| -+|||+.+ .+.|..+|++|.+.-.
T Consensus 22 k~vlVTGa-s~gIG~ai-----a~~l~~~G~~V~~~~r 53 (273)
T 1ae1_A 22 TTALVTGG-SKGIGYAI-----VEELAGLGARVYTCSR 53 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECC-cchHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47777654 4567778998877533
No 341
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=36.11 E-value=36 Score=31.25 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=27.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
||-|+||||- |-+.+.+.+.|.++|++|.++--+|
T Consensus 4 m~~ilItGat------G~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGAS------GFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCC------HHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCC------chHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4569999975 7777888888999999998875543
No 342
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=36.01 E-value=84 Score=29.37 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=20.6
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 58 ~~vdgii~~~~~~~---~---~~~~~l~~~~iPvV~~ 88 (275)
T 3d8u_A 58 SRPAGVVLFGSEHS---Q---RTHQLLEASNTPVLEI 88 (275)
T ss_dssp SCCCCEEEESSCCC---H---HHHHHHHHHTCCEEEE
T ss_pred cCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEE
Confidence 58999998764322 1 3455566678998765
No 343
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=36.00 E-value=22 Score=34.98 Aligned_cols=30 Identities=33% Similarity=0.512 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 50 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~ 79 (294)
T 3r3s_A 50 RKALVTGGD-SGIGRAA-----AIAYAREGADVAIN 79 (294)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999994 7777654 56677889988764
No 344
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=35.86 E-value=26 Score=33.58 Aligned_cols=33 Identities=33% Similarity=0.466 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-|+||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 22 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 54 (253)
T 2nm0_A 22 RSVLVTGGN-RGIGLA-----IARAFADAGDKVAITYRS 54 (253)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999984 777765 456777889999876443
No 345
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.82 E-value=20 Score=35.28 Aligned_cols=32 Identities=31% Similarity=0.539 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++|||| -+|||+.+ .+.|.++|++|.+.-.
T Consensus 27 k~vlVTGa-s~gIG~ai-----a~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 27 KSVIITGS-SNGIGRSA-----AVIFAKEGAQVTITGR 58 (297)
T ss_dssp CEEEETTC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47777755 4567778999887643
No 346
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=35.82 E-value=17 Score=35.31 Aligned_cols=30 Identities=33% Similarity=0.511 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+. +.+.|.++|++|.+.
T Consensus 27 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~ 56 (271)
T 4ibo_A 27 RTALVTGSS-RGLGRA-----MAEGLAVAGARILIN 56 (271)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 777764 456677889988774
No 347
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=35.66 E-value=23 Score=33.96 Aligned_cols=31 Identities=26% Similarity=0.374 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 8 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 38 (262)
T 1zem_A 8 KVCLVTGAG-GNIGLA-----TALRLAEEGTAIALLD 38 (262)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999984 777765 4466778899987764
No 348
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=35.66 E-value=22 Score=34.93 Aligned_cols=31 Identities=26% Similarity=0.392 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.|+||||- +|||+.++ +.|.++|++|.+.-
T Consensus 35 k~vlVTGas-~gIG~aia-----~~L~~~G~~V~~~~ 65 (291)
T 3cxt_A 35 KIALVTGAS-YGIGFAIA-----SAYAKAGATIVFND 65 (291)
T ss_dssp CEEEEETCS-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEEe
Confidence 679999984 77777544 55667899887753
No 349
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=35.61 E-value=26 Score=34.70 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=26.1
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv-~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- -||||+.+ .+.|..+|++|.+.-.
T Consensus 10 k~~lVTGa~~s~GIG~ai-----a~~la~~G~~Vv~~~r 43 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAI-----AKHLASAGARVALGTW 43 (315)
T ss_dssp CEEEEECCSSSSSHHHHH-----HHHHHTTTCEEEEEEC
T ss_pred CEEEEeCCCCCCChHHHH-----HHHHHHCCCEEEEEec
Confidence 789999995 79999865 4567778999987643
No 350
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=35.54 E-value=25 Score=33.35 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~-v~~~k 38 (564)
|-++|||| -+|||+.+ .+.|.++|++ |.+.-
T Consensus 6 k~vlVtGa-s~gIG~~~-----a~~l~~~G~~~v~~~~ 37 (254)
T 1sby_A 6 KNVIFVAA-LGGIGLDT-----SRELVKRNLKNFVILD 37 (254)
T ss_dssp CEEEEETT-TSHHHHHH-----HHHHHHTCCSEEEEEE
T ss_pred cEEEEECC-CChHHHHH-----HHHHHHCCCcEEEEEe
Confidence 67999998 47787654 4567778986 66653
No 351
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=35.51 E-value=21 Score=33.96 Aligned_cols=30 Identities=33% Similarity=0.527 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-|+||||- +|||+.+ .+.|..+|++|.+.
T Consensus 22 k~vlItGas-ggiG~~l-----a~~l~~~G~~v~~~ 51 (274)
T 1ja9_A 22 KVALTTGAG-RGIGRGI-----AIELGRRGASVVVN 51 (274)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999984 6777654 45677789988764
No 352
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=35.35 E-value=20 Score=34.77 Aligned_cols=29 Identities=34% Similarity=0.547 Sum_probs=21.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
|.++||||- ||||+. +.+.|-++|++|.+
T Consensus 28 k~~lVTGas-~GIG~a-----ia~~la~~G~~Vv~ 56 (267)
T 3u5t_A 28 KVAIVTGAS-RGIGAA-----IAARLASDGFTVVI 56 (267)
T ss_dssp CEEEEESCS-SHHHHH-----HHHHHHHHTCEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEE
Confidence 789999984 677765 44566677998865
No 353
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=35.22 E-value=21 Score=34.69 Aligned_cols=30 Identities=37% Similarity=0.525 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 30 k~vlVTGas-~gIG~ai-----a~~L~~~G~~V~~~ 59 (276)
T 2b4q_A 30 RIALVTGGS-RGIGQMI-----AQGLLEAGARVFIC 59 (276)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEE
Confidence 789999984 7777654 45677789988765
No 354
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=35.06 E-value=22 Score=33.67 Aligned_cols=30 Identities=30% Similarity=0.504 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.|+||||- +|||+. +.+.|.++|++|.+.
T Consensus 8 k~vlITGas-ggiG~~-----~a~~l~~~G~~V~~~ 37 (261)
T 1gee_A 8 KVVVITGSS-TGLGKS-----MAIRFATEKAKVVVN 37 (261)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEE
Confidence 689999985 777764 445666789987764
No 355
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=34.96 E-value=22 Score=35.44 Aligned_cols=31 Identities=29% Similarity=0.462 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+. +.+.|-++|++|.++-
T Consensus 47 k~~lVTGas-~GIG~a-----ia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 47 KVAFITGAA-RGQGRT-----HAVRLAQDGADIVAID 77 (317)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCeEEEEe
Confidence 689999985 777765 4566778899998763
No 356
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=34.88 E-value=31 Score=33.16 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=27.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC----CCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC----GLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~----g~~v~~~k 38 (564)
++|.+.| .+|-||+..+.-|...|+.+ |++|...+
T Consensus 26 ~~I~~eG--~~GsGKsT~~~~l~~~l~~~~~~~g~~v~~~r 64 (227)
T 3v9p_A 26 KFITFEG--IDGAGKTTHLQWFCDRLQERLGPAGRHVVVTR 64 (227)
T ss_dssp CEEEEEC--CC---CHHHHHHHHHHHHHHHGGGTCCEEEEE
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHhhccccceeeeeec
Confidence 5889998 58999999999999999998 99886543
No 357
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=34.84 E-value=31 Score=33.83 Aligned_cols=31 Identities=26% Similarity=0.500 Sum_probs=22.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
||-|+||||- |-+.+.|.+.|.++|++|.++
T Consensus 1 M~~vlVTGat------G~iG~~l~~~L~~~g~~V~~~ 31 (347)
T 1orr_A 1 MAKLLITGGC------GFLGSNLASFALSQGIDLIVF 31 (347)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEeCCC------chhHHHHHHHHHhCCCEEEEE
Confidence 6779999973 444556666777789988775
No 358
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=34.70 E-value=20 Score=34.12 Aligned_cols=30 Identities=47% Similarity=0.567 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 7 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~ 36 (253)
T 1hxh_A 7 KVALVTGGA-SGVGLEV-----VKLLLGEGAKVAFS 36 (253)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999984 6777654 45677789998775
No 359
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=34.59 E-value=24 Score=34.38 Aligned_cols=31 Identities=35% Similarity=0.503 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-|+||||- +|||+. +.+.|..+|++|.+.=
T Consensus 19 k~vlVTGas-ggIG~~-----la~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 19 QVAIVTGGA-TGIGKA-----IVKELLELGSNVVIAS 49 (303)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999984 777765 4456777899887753
No 360
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=34.55 E-value=24 Score=33.98 Aligned_cols=31 Identities=32% Similarity=0.525 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 7 k~vlITGas-~gIG~ai-----a~~l~~~G~~V~~~~ 37 (263)
T 2a4k_A 7 KTILVTGAA-SGIGRAA-----LDLFAREGASLVAVD 37 (263)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 689999984 7777754 456777899988753
No 361
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=34.52 E-value=21 Score=33.55 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-|+||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 12 ~~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~ 42 (255)
T 1fmc_A 12 KCAIITGAG-AGIGKEI-----AITFATAGASVVVSD 42 (255)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEEEE
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHCCCEEEEEc
Confidence 679999984 6777654 456667899887753
No 362
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=34.51 E-value=43 Score=33.06 Aligned_cols=32 Identities=6% Similarity=-0.034 Sum_probs=22.2
Q ss_pred CCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 362 ~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
++||||+.+ . .. .....++.+.+.++|+.-+.
T Consensus 62 ~vDgiIi~~-~-~~---~~~~~~~~~~~~giPvV~~~ 93 (350)
T 3h75_A 62 KPDYLMLVN-E-QY---VAPQILRLSQGSGIKLFIVN 93 (350)
T ss_dssp CCSEEEEEC-C-SS---HHHHHHHHHTTSCCEEEEEE
T ss_pred CCCEEEEeC-c-hh---hHHHHHHHHHhCCCcEEEEc
Confidence 899999975 1 11 23455677778899987664
No 363
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=34.47 E-value=23 Score=33.91 Aligned_cols=31 Identities=42% Similarity=0.686 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 7 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 37 (257)
T 3imf_A 7 KVVIITGGS-SGMGKG-----MATRFAKEGARVVITG 37 (257)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 677765 4566778899987753
No 364
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=34.39 E-value=23 Score=34.28 Aligned_cols=31 Identities=32% Similarity=0.430 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 28 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~~ 58 (266)
T 3grp_A 28 RKALVTGAT-GGIGEA-----IARCFHAQGAIVGLHG 58 (266)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4567778899887653
No 365
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=34.34 E-value=25 Score=33.37 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- +|||+ ++.+.|.++|++|.+.=.
T Consensus 10 k~vlITGas-~gIG~-----~~a~~l~~~G~~V~~~~r 41 (261)
T 3n74_A 10 KVALITGAG-SGFGE-----GMAKRFAKGGAKVVIVDR 41 (261)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHH-----HHHHHHHHCCCEEEEEcC
Confidence 789999996 77775 455667788999887643
No 366
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=34.31 E-value=22 Score=35.71 Aligned_cols=31 Identities=35% Similarity=0.363 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+. +.+.|.++|++|.+.=
T Consensus 47 k~~lVTGas-~GIG~a-----ia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 47 PVALVTGAA-KRLGRS-----IAEGLHAEGYAVCLHY 77 (328)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEc
Confidence 689999996 777775 4566778899988763
No 367
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=34.23 E-value=25 Score=35.28 Aligned_cols=30 Identities=37% Similarity=0.560 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- ||||+ ++.+.|-++|++|.+.
T Consensus 6 k~vlVTGas-~GIG~-----aia~~L~~~G~~V~~~ 35 (324)
T 3u9l_A 6 KIILITGAS-SGFGR-----LTAEALAGAGHRVYAS 35 (324)
T ss_dssp CEEEESSCS-SHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHH-----HHHHHHHHCCCEEEEe
Confidence 689999985 77776 4556677889988654
No 368
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=34.23 E-value=22 Score=34.20 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-++||||- ||||+.+ .+.|-++|++|.+.-.
T Consensus 21 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 21 KRALITGAT-KGIGADI-----ARAFAAAGARLVLSGR 52 (266)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999995 7777654 4667788998877644
No 369
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=34.19 E-value=50 Score=31.12 Aligned_cols=67 Identities=16% Similarity=0.144 Sum_probs=33.8
Q ss_pred HHHHHHHHcCCcce-eeeEEEEecCCCcccccccCCchhhh-HHHHhcc--CCCEEEeCCCCCCCchhHHHHHHHHHHHc
Q 008476 315 SILKALLHASVDLR-KKLVIDWIPACDLEDATEKENPDAYK-AAWKLLK--GADGILVPGGFGNRGVQGKILAAKYAREH 390 (564)
Q Consensus 315 SIi~aL~~aG~~v~-v~v~i~wi~s~~le~~~~~~~p~~y~-~~~~~L~--~~DGIllpGGfG~r~~eg~i~~ir~a~e~ 390 (564)
.+.+.|+..|+++. +. ..-++ ++. +.-. .+.+.++ ++|-||.+||-|-...+-..++++.+.+.
T Consensus 27 ~L~~~L~~~G~~~~v~~--~~iV~-Dd~---------~~I~~al~~a~~~~~~DlVitTGGtg~g~~D~T~ea~~~~~~~ 94 (195)
T 1di6_A 27 ALEEWLTSALTTPFELE--TRLIP-DEQ---------AIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADR 94 (195)
T ss_dssp HHHHHHHHHBCSCEEEE--EEEEE-SCH---------HHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCceEE--EEEeC-CCH---------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCccHHHHHHHHhcc
Confidence 57778888998731 21 11122 211 1111 1222334 69999999975433222234455544444
Q ss_pred CCC
Q 008476 391 RIP 393 (564)
Q Consensus 391 ~iP 393 (564)
.+|
T Consensus 95 ~l~ 97 (195)
T 1di6_A 95 EMP 97 (195)
T ss_dssp ECH
T ss_pred cCc
Confidence 455
No 370
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=34.17 E-value=32 Score=33.28 Aligned_cols=33 Identities=18% Similarity=0.339 Sum_probs=25.3
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||-- ||||+.+ .+.|.++|++|.+.=.
T Consensus 27 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~~r 60 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGI-----AKAMHREGAELAFTYV 60 (280)
T ss_dssp CEEEECCCCSTTCHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHcCCEEEEeeC
Confidence 7899999854 7898765 4566778999887644
No 371
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=34.16 E-value=25 Score=34.10 Aligned_cols=30 Identities=33% Similarity=0.472 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 30 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 59 (283)
T 1g0o_A 30 KVALVTGAG-RGIGREM-----AMELGRRGCKVIVN 59 (283)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999984 7777754 45667789988764
No 372
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=34.12 E-value=32 Score=33.16 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=24.6
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||-- +|||+.+ .+.|..+|++|.+.-
T Consensus 7 k~vlVTGas~~~gIG~~~-----a~~l~~~G~~V~~~~ 39 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGI-----AQSCFNQGATLAFTY 39 (275)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHTTTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHH-----HHHHHHCCCEEEEEe
Confidence 7899999963 8899765 456777899987753
No 373
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=33.97 E-value=25 Score=34.89 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++|||| -||||+.+ .+.|-+.|.+|.+.=
T Consensus 30 KvalVTGa-s~GIG~ai-----A~~la~~Ga~V~i~~ 60 (273)
T 4fgs_A 30 KIAVITGA-TSGIGLAA-----AKRFVAEGARVFITG 60 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCc-CCHHHHHH-----HHHHHHCCCEEEEEE
Confidence 68999998 48888764 567889999988753
No 374
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=33.87 E-value=25 Score=33.37 Aligned_cols=34 Identities=26% Similarity=0.290 Sum_probs=24.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC---CeeEEeeec
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG---LRVTCIKID 40 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g---~~v~~~k~d 40 (564)
+|-|+||||- +|||+. +.+.|.++| ++|.+.-.+
T Consensus 21 ~k~vlITGas-ggIG~~-----la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 21 MNSILITGCN-RGLGLG-----LVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp CSEEEESCCS-SHHHHH-----HHHHHHTSSSCCSEEEEEESC
T ss_pred CCEEEEECCC-CcHHHH-----HHHHHHhcCCCCcEEEEEecC
Confidence 4789999994 777764 445677788 888776443
No 375
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=33.85 E-value=23 Score=33.67 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-|+|||| -+|||+.+ .+.|.++|++|.+.-.+
T Consensus 15 k~vlITGa-sggiG~~l-----a~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 15 KTVLVTGG-TKGIGHAI-----VEEFAGFGAVIHTCARN 47 (266)
T ss_dssp CEEEETTT-TSHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CCHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 67999998 46777654 45666789988776433
No 376
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=33.80 E-value=25 Score=30.91 Aligned_cols=25 Identities=16% Similarity=0.328 Sum_probs=19.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll 27 (564)
|+.|++|| .+|-||...|.-|...|
T Consensus 2 ~~~I~l~G--~~GsGKsT~a~~La~~l 26 (173)
T 1e6c_A 2 TEPIFMVG--ARGCGMTTVGRELARAL 26 (173)
T ss_dssp CCCEEEES--CTTSSHHHHHHHHHHHH
T ss_pred CceEEEEC--CCCCCHHHHHHHHHHHh
Confidence 57899999 58999987776666544
No 377
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=33.56 E-value=27 Score=33.47 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.|+|||| -+|||+.++ +.|.++|++|.+.-
T Consensus 35 k~vlITGa-sggIG~~la-----~~L~~~G~~V~~~~ 65 (279)
T 3ctm_A 35 KVASVTGS-SGGIGWAVA-----EAYAQAGADVAIWY 65 (279)
T ss_dssp CEEEETTT-TSSHHHHHH-----HHHHHHTCEEEEEE
T ss_pred CEEEEECC-CcHHHHHHH-----HHHHHCCCEEEEEe
Confidence 67999998 478887654 45666799887753
No 378
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=33.52 E-value=1.1e+02 Score=28.76 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=20.5
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHH-cCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYARE-HRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e-~~iPiLGI 397 (564)
.++||||+.+...+ . ..++.+.+ .++|+.-+
T Consensus 76 ~~vdgii~~~~~~~---~---~~~~~l~~~~~iPvV~~ 107 (296)
T 3brq_A 76 LRCDAIMIYPRFLS---V---DEIDDIIDAHSQPIMVL 107 (296)
T ss_dssp TTCSEEEEECSSSC---H---HHHHHHHHTCSSCEEEE
T ss_pred cCCCEEEEecCCCC---h---HHHHHHHhcCCCCEEEE
Confidence 58999998764221 1 23455667 79998765
No 379
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=33.41 E-value=25 Score=34.21 Aligned_cols=30 Identities=37% Similarity=0.626 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||- +|||+. +.+.|-++|++|.+.
T Consensus 30 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~ 59 (280)
T 4da9_A 30 PVAIVTGGR-RGIGLG-----IARALAASGFDIAIT 59 (280)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEecCC-CHHHHH-----HHHHHHHCCCeEEEE
Confidence 679999984 677765 456677789987664
No 380
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=33.27 E-value=54 Score=29.12 Aligned_cols=32 Identities=28% Similarity=0.312 Sum_probs=25.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVT 35 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~ 35 (564)
++|.+||. +|-||=..+..|...|+..|+.+.
T Consensus 6 ~~i~l~G~--~GsGKST~~~~L~~~l~~~g~~~i 37 (179)
T 2pez_A 6 CTVWLTGL--SGAGKTTVSMALEEYLVCHGIPCY 37 (179)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHhhCCCcEE
Confidence 57899996 888998888888888877787654
No 381
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=33.27 E-value=65 Score=30.58 Aligned_cols=31 Identities=13% Similarity=0.305 Sum_probs=19.3
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 63 ~~vdgiIi~~~~~~~------~~~~~~~~~~iPvV~~ 93 (291)
T 3egc_A 63 RRVDGLILAPSEGEH------DYLRTELPKTFPIVAV 93 (291)
T ss_dssp TTCSEEEECCCSSCC------HHHHHSSCTTSCEEEE
T ss_pred CCCCEEEEeCCCCCh------HHHHHhhccCCCEEEE
Confidence 589999998753311 2344455567777544
No 382
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=33.24 E-value=26 Score=33.37 Aligned_cols=31 Identities=29% Similarity=0.559 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.|+||||- +|||+- +.+.|.++|++|.+.-
T Consensus 17 k~vlITGas-ggiG~~-----~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGA-GGIGET-----TAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEc
Confidence 679999984 677764 4456677899988753
No 383
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=33.12 E-value=44 Score=32.09 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=30.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~-~g~~v~~ 36 (564)
++|.++|. +|-||...+..|...|.. +|++|..
T Consensus 22 ~~i~~~G~--~g~GKst~~~~l~~~l~~~~g~~v~~ 55 (223)
T 3ld9_A 22 MFITFEGI--DGSGKTTQSHLLAEYLSEIYGVNNVV 55 (223)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCGGGEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhccCceeeE
Confidence 68999985 899999999999999999 9998876
No 384
>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.00A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=32.97 E-value=45 Score=35.61 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.|-||| +=||+.|++=|..+|++.|++|-.+.
T Consensus 109 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~g 141 (498)
T 1e8c_A 109 RLVGVTG----TNGKTTTTQLLAQWSQLLGEISAVMG 141 (498)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEeC----CcChHHHHHHHHHHHHhCCCCEEEEC
Confidence 6788888 56999999999999999999987653
No 385
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=32.97 E-value=35 Score=33.32 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=23.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
||-|+||||- |-+.+.+.+.|.++|++|..+-
T Consensus 1 M~~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~ 32 (330)
T 2c20_A 1 MNSILICGGA------GYIGSHAVKKLVDEGLSVVVVD 32 (330)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCC------cHHHHHHHHHHHhCCCEEEEEe
Confidence 6679999973 5556677777888899988753
No 386
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=32.89 E-value=85 Score=29.41 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=19.3
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHH-HHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAK-YAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir-~a~e~~iPiLGI 397 (564)
.++||||+.+ .+ -..++ .+.+.++|+.-+
T Consensus 63 ~~~dgiIi~~--~~------~~~~~~~l~~~~iPvV~~ 92 (277)
T 3e61_A 63 HNCTGMISTA--FN------ENIIENTLTDHHIPFVFI 92 (277)
T ss_dssp TTCSEEEECG--GG------HHHHHHHHHHC-CCEEEG
T ss_pred CCCCEEEEec--CC------hHHHHHHHHcCCCCEEEE
Confidence 5899999977 11 22356 677789998654
No 387
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=32.85 E-value=39 Score=32.23 Aligned_cols=40 Identities=25% Similarity=0.337 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-----CCeeEEeeecccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-----GLRVTCIKIDPYL 43 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~-----g~~v~~~k~dpyl 43 (564)
..|.|||+ ||-||..+|.-|...|... |.+|..+-.|-|.
T Consensus 23 ~iI~I~G~--~GSGKST~a~~L~~~lg~~~~d~~~~~~~~i~~D~~~ 67 (252)
T 1uj2_A 23 FLIGVSGG--TASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFY 67 (252)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHTTGGGSCGGGCSEEEEEGGGGB
T ss_pred EEEEEECC--CCCCHHHHHHHHHHHhhhhcccccCCceEEEecCccc
Confidence 56899997 5668988777666644322 2334445444443
No 388
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=32.77 E-value=24 Score=34.09 Aligned_cols=31 Identities=32% Similarity=0.564 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- +|||+.+ .+.|.++|++|.+.=
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 37 (280)
T 1xkq_A 7 KTVIITGSS-NGIGRTT-----AILFAQEGANVTITG 37 (280)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999984 6777754 456677899887753
No 389
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=32.75 E-value=1.9e+02 Score=27.21 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=22.5
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
.++||||+.+... ......++.+.+.++|+.-+.
T Consensus 58 ~~vdgiii~~~~~----~~~~~~~~~~~~~~iPvV~~~ 91 (309)
T 2fvy_A 58 KGVKALAINLVDP----AAAGTVIEKARGQNVPVVFFN 91 (309)
T ss_dssp TTCSEEEECCSSG----GGHHHHHHHHHTTTCCEEEES
T ss_pred cCCCEEEEeCCCc----chhHHHHHHHHHCCCcEEEec
Confidence 5899999976322 112345666777899987664
No 390
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=32.67 E-value=35 Score=33.04 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=24.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||-- +|||+.++ +.|.++|++|.+.-
T Consensus 22 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 22 KRALITGVANERSIAYGIA-----KSFHREGAQLAFTY 54 (285)
T ss_dssp CEEEECCCSSTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHcCCEEEEEe
Confidence 6799999964 78998654 55667899887753
No 391
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=32.65 E-value=44 Score=31.55 Aligned_cols=71 Identities=15% Similarity=0.163 Sum_probs=48.2
Q ss_pred CCcEEEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEee
Q 008476 139 PVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (564)
Q Consensus 139 ~~d~~i~e~ggtvgdies~pf~ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~ 218 (564)
++|++++|+||. + -+-. |...++..+++...++.+|.+-- ++.. ...|.+.-.+++++.++.++-+.++.
T Consensus 138 ~~Dvlil~~g~~-~---h~~~-~~a~~~~~~~~~k~vi~~H~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (220)
T 1vjn_A 138 EIDVLLVPVGGT-Y---TIGP-KEAKEVADLLNAKVIIPMHYKTK-YLKF----NLLPVDDFLKLFDSYERVGNILELFE 207 (220)
T ss_dssp CCSEEEEECCSS-S---SCCH-HHHHHHHHHTTCSEEEEESCCCS-SCCT----TCCCTHHHHTTSSCCEECCSEEEESS
T ss_pred CCCEEEEcCCCc-C---cCCH-HHHHHHHHhcCCCEEEEEecccc-cccC----CchhHHHHHHHHHhcCCCccceEEec
Confidence 689999999875 2 1233 33344455677888999999763 3321 15678888888888888777666665
Q ss_pred C
Q 008476 219 T 219 (564)
Q Consensus 219 ~ 219 (564)
.
T Consensus 208 ~ 208 (220)
T 1vjn_A 208 K 208 (220)
T ss_dssp C
T ss_pred C
Confidence 4
No 392
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=32.20 E-value=38 Score=32.84 Aligned_cols=30 Identities=50% Similarity=0.633 Sum_probs=21.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|| |+||||- |-+.+.+.+.|.++|++|..+
T Consensus 1 m~-vlVTGat------G~iG~~l~~~L~~~G~~V~~~ 30 (311)
T 2p5y_A 1 MR-VLVTGGA------GFIGSHIVEDLLARGLEVAVL 30 (311)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHTTTCEEEEE
T ss_pred CE-EEEEeCC------cHHHHHHHHHHHHCCCEEEEE
Confidence 44 8999974 445556667777889998775
No 393
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=32.19 E-value=37 Score=32.43 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=24.5
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||-- +|||+.+ .+.|.++|++|.+.-
T Consensus 10 k~vlVTGas~~~gIG~~i-----a~~l~~~G~~V~~~~ 42 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGI-----AQAMHREGAELAFTY 42 (265)
T ss_dssp CEEEECCCCSTTSHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHCCCEEEEEc
Confidence 6799999964 7898765 456777899987753
No 394
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=32.12 E-value=2.1e+02 Score=26.84 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=21.2
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+ . ....++.+.+.++|+.-+
T Consensus 57 ~~vdgiI~~~~~~~-~---~~~~~~~~~~~~iPvV~~ 89 (290)
T 2fn9_A 57 AGYDAIIFNPTDAD-G---SIANVKRAKEAGIPVFCV 89 (290)
T ss_dssp TTCSEEEECCSCTT-T---THHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCChH-H---HHHHHHHHHHCCCeEEEE
Confidence 58999999864322 1 123456666778998654
No 395
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=32.08 E-value=62 Score=30.19 Aligned_cols=66 Identities=23% Similarity=0.403 Sum_probs=42.9
Q ss_pred cchHhhHHHHhhhhcCCCCCCee---EEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHH
Q 008476 89 TTGKIYQSVIDKERKGDYLGKTV---QVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALG 164 (564)
Q Consensus 89 t~g~iy~~vi~ker~g~ylg~tv---qviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggt-vgdies~pf~ea~r 164 (564)
|+|....+.+++. .++|-.| .+||.=-++|++.|++... ..++|++|+ .||| +|+--=.| ||++
T Consensus 34 ~n~~~L~~~L~~~---~~~G~~v~~~~iv~Dd~~~I~~al~~a~~------~~~~DlVIt-tGGtg~g~~D~t~--eal~ 101 (189)
T 1jlj_A 34 RSGINLKDLVQDP---SLLGGTISAYKIVPDEIEEIKETLIDWCD------EKELNLILT-TGGTGFAPRDVTP--EATK 101 (189)
T ss_dssp HHHHHHHHHHHCT---TTTCCEEEEEEEECSCHHHHHHHHHHHHH------TSCCSEEEE-ESCCSSSTTCCHH--HHHH
T ss_pred hHHHHHHHHHhch---hcCCcEEEEEEEeCCCHHHHHHHHHHHhh------cCCCCEEEE-cCCCCCCCcccHH--HHHH
Confidence 3555555555431 2345443 5778777889999998863 236898866 7887 66544455 8988
Q ss_pred Hh
Q 008476 165 QF 166 (564)
Q Consensus 165 q~ 166 (564)
++
T Consensus 102 ~~ 103 (189)
T 1jlj_A 102 EV 103 (189)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 396
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.07 E-value=28 Score=33.63 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+. +.+.|-.+|++|.+.-.
T Consensus 16 k~~lVTGas-~gIG~a-----~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAA-RGQGRS-----HAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEec
Confidence 789999985 677654 55677788999887644
No 397
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=32.05 E-value=23 Score=34.66 Aligned_cols=31 Identities=32% Similarity=0.568 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- ||||+. +.+.|-++|++|.+.-
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 9 KIAIVTGAS-SGIGRA-----AALLFAREGAKVVVTA 39 (280)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEECC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEE
Confidence 679999985 777765 4566777899887753
No 398
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=31.87 E-value=1.4e+02 Score=28.58 Aligned_cols=31 Identities=19% Similarity=0.162 Sum_probs=20.4
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+..... + ..++.+.+ ++|+.-+
T Consensus 70 ~~vdgiI~~~~~~~~--~---~~~~~l~~-~iPvV~i 100 (303)
T 3kke_A 70 GRVDGVLLQRREDFD--D---DMLAAVLE-GVPAVTI 100 (303)
T ss_dssp CSSSEEEECCCTTCC--H---HHHHHHHT-TSCEEEE
T ss_pred CCCcEEEEecCCCCc--H---HHHHHHhC-CCCEEEE
Confidence 589999998753321 1 14555666 8998655
No 399
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=31.86 E-value=40 Score=31.50 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=25.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g-~~v~~~k~dp 41 (564)
||-|+||||- ++|| +.|.+.|.++| ++|.+.--+|
T Consensus 23 mk~vlVtGat-G~iG-----~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGAG-GQIA-----RHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETTT-SHHH-----HHHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEeCC-cHHH-----HHHHHHHHhCCCceEEEEEcCh
Confidence 5789999974 4444 45667788889 8998876554
No 400
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=31.73 E-value=92 Score=29.83 Aligned_cols=31 Identities=23% Similarity=0.446 Sum_probs=21.0
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+. ..++.+.+.++|+.-+
T Consensus 82 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~i 112 (305)
T 3huu_A 82 KSVDGFILLYSLKDD------PIEHLLNEFKVPYLIV 112 (305)
T ss_dssp TCCSEEEESSCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCcCCc------HHHHHHHHcCCCEEEE
Confidence 589999998743221 3455666778998654
No 401
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=31.64 E-value=29 Score=33.03 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH---CCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA---CGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~---~g~~v~~~k 38 (564)
|.++||||- ||||+.+ .+.|.+ +|++|.+.=
T Consensus 7 k~~lVTGas-~gIG~~i-----a~~l~~~~~~G~~V~~~~ 40 (259)
T 1oaa_A 7 AVCVLTGAS-RGFGRAL-----APQLARLLSPGSVMLVSA 40 (259)
T ss_dssp EEEEESSCS-SHHHHHH-----HHHHHTTBCTTCEEEEEE
T ss_pred cEEEEeCCC-ChHHHHH-----HHHHHHhhcCCCeEEEEe
Confidence 789999985 7777654 344555 899887763
No 402
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=31.58 E-value=89 Score=29.63 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=17.7
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
.++||||+.+...+. ..++.+.+.++|+.-+-
T Consensus 64 ~~vdgiI~~~~~~~~------~~~~~l~~~~iPvV~~~ 95 (290)
T 3clk_A 64 RPVMGILLLSIALTD------DNLQLLQSSDVPYCFLS 95 (290)
T ss_dssp SCCSEEEEESCC----------CHHHHHCC--CEEEES
T ss_pred cCCCEEEEecccCCH------HHHHHHHhCCCCEEEEc
Confidence 589999987643221 23455556789987653
No 403
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=31.53 E-value=36 Score=33.16 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=26.2
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv-~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|.++||||- -||||+.++ +.|.++|++|.+.-.+|
T Consensus 9 k~~lVTGas~~~GIG~aia-----~~la~~G~~V~~~~r~~ 44 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVA-----KSLAAAGAEILVGTWVP 44 (297)
T ss_dssp CEEEEECCSSSSSHHHHHH-----HHHHHTTCEEEEEEEHH
T ss_pred CEEEEECCCCCCChHHHHH-----HHHHHCCCeEEEeeccc
Confidence 679999996 488987654 56777899998864443
No 404
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=31.50 E-value=27 Score=31.59 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (564)
++|+++|+ +|-||...+..|...| .|++|..
T Consensus 5 ~~I~l~G~--~GsGKsT~~~~L~~~l--~g~~~~~ 35 (204)
T 2v54_A 5 ALIVFEGL--DKSGKTTQCMNIMESI--PANTIKY 35 (204)
T ss_dssp CEEEEECC--TTSSHHHHHHHHHHTS--CGGGEEE
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHH--CCCceEE
Confidence 68999997 7889987777666544 3666543
No 405
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=30.94 E-value=28 Score=33.37 Aligned_cols=35 Identities=29% Similarity=0.408 Sum_probs=26.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
||-|+||||- ++||+ .|.+.|..+|++|.+.-.++
T Consensus 3 ~k~vlVTGas-g~IG~-----~la~~L~~~G~~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAA-GQLGR-----VMRERLAPMAEILRLADLSP 37 (267)
T ss_dssp EEEEEEESTT-SHHHH-----HHHHHTGGGEEEEEEEESSC
T ss_pred CCEEEEECCC-CHHHH-----HHHHHHHhcCCEEEEEecCC
Confidence 4789999985 66665 45567778899999877665
No 406
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=30.92 E-value=25 Score=35.22 Aligned_cols=30 Identities=30% Similarity=0.337 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.|+||||- ||||+.+ .+.|.++|++|.++
T Consensus 3 k~vlVTGas-~GIG~al-----a~~L~~~G~~v~~v 32 (327)
T 1jtv_A 3 TVVLITGCS-SGIGLHL-----AVRLASDPSQSFKV 32 (327)
T ss_dssp EEEEESCCS-SHHHHHH-----HHHHHTCTTCCEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCceEEE
Confidence 789999985 7888755 46677788887654
No 407
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=30.88 E-value=1.2e+02 Score=28.99 Aligned_cols=34 Identities=26% Similarity=0.294 Sum_probs=22.3
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
.++||||+.+.... . ....++.+.+.++|+.-+.
T Consensus 56 ~~vdgiIi~~~~~~-~---~~~~~~~~~~~~iPvV~~~ 89 (313)
T 2h3h_A 56 EGVNGIAIAPSDPT-A---VIPTIKKALEMGIPVVTLD 89 (313)
T ss_dssp TTCSEEEECCSSTT-T---THHHHHHHHHTTCCEEEES
T ss_pred cCCCEEEEeCCChH-H---HHHHHHHHHHCCCeEEEeC
Confidence 68999999764321 1 1234566677899987653
No 408
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=30.84 E-value=37 Score=32.44 Aligned_cols=31 Identities=32% Similarity=0.356 Sum_probs=23.6
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||-- +|||+.++ +.|.++|++|.+.
T Consensus 9 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~ 40 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIA-----AKLKEAGAEVALS 40 (261)
T ss_dssp CEEEEESCCSSSSHHHHHH-----HHHHHHTCEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHCCCEEEEE
Confidence 6799999964 78888654 5566679988775
No 409
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=30.84 E-value=38 Score=32.16 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=26.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeE
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVT 35 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~ 35 (564)
++|+++|. +|-||+..+.-|...|.. |++|.
T Consensus 27 ~~i~i~G~--~GsGKsT~~~~l~~~l~~-~~~~~ 57 (229)
T 4eaq_A 27 AFITFEGP--EGSGKTTVINEVYHRLVK-DYDVI 57 (229)
T ss_dssp EEEEEECC--TTSCHHHHHHHHHHHHTT-TSCEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhc-CCCce
Confidence 68999995 799999999999999887 76653
No 410
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=30.53 E-value=30 Score=35.12 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+.+ .+.|-++|++|.+.=.
T Consensus 46 k~vlVTGas-~GIG~ai-----a~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 46 CTVFITGAS-RGIGKAI-----ALKAAKDGANIVIAAK 77 (346)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHTTTCEEEEEES
T ss_pred CEEEEeCCC-hHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 789999996 7787654 4667788998877643
No 411
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=30.36 E-value=39 Score=33.61 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=31.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEe-eeccccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCI-KIDPYLN 44 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g--~~v~~~-k~dpyln 44 (564)
..|.|+|+ ||-||=..+..|..+|...| .++..+ -.|+|+-
T Consensus 32 ~ii~I~G~--sGsGKSTla~~L~~~l~~~g~~~~~~~iv~~D~f~~ 75 (290)
T 1odf_A 32 LFIFFSGP--QGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYL 75 (290)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHhhhcCCCCceEEEeccccccC
Confidence 46788886 67789999999999998866 555555 7777653
No 412
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=30.16 E-value=39 Score=30.42 Aligned_cols=25 Identities=32% Similarity=0.567 Sum_probs=17.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL 32 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~ 32 (564)
+.|.+||+ +|-||.. ++++|..+|+
T Consensus 9 ~~I~i~G~--~GsGKST----~~~~La~~g~ 33 (203)
T 1uf9_A 9 IIIGITGN--IGSGKST----VAALLRSWGY 33 (203)
T ss_dssp EEEEEEEC--TTSCHHH----HHHHHHHTTC
T ss_pred eEEEEECC--CCCCHHH----HHHHHHHCCC
Confidence 57899998 6778854 5566666664
No 413
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=30.15 E-value=39 Score=32.14 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=23.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.++||||-= ||||+.+ .+.|.++|++|.+.
T Consensus 8 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~ 39 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGI-----ARSLHEAGARLIFT 39 (266)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHH-----HHHHHHCCCEEEEe
Confidence 6899999864 6788754 56677789987664
No 414
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=30.11 E-value=2.4e+02 Score=27.31 Aligned_cols=92 Identities=16% Similarity=0.113 Sum_probs=50.1
Q ss_pred CCceEEEEEeccCCCc-----chHHHHHHHHHHcCC-cceeeeEEEEecCCCcccccccCCchhhhHHHHhc---cCCCE
Q 008476 295 HEPVRIAMVGKYTGLS-----DAYLSILKALLHASV-DLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL---KGADG 365 (564)
Q Consensus 295 ~~~~~IavVGkY~~~~-----Day~SIi~aL~~aG~-~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L---~~~DG 365 (564)
...++||++....... +....+..+++..|. -...++++.+.++.. +|+...+..+.| +++|+
T Consensus 4 ~~~i~IG~~~p~sg~~~~~g~~~~~g~~~a~~~~~~~i~G~~i~l~~~D~~~--------~~~~~~~~~~~li~~~~v~~ 75 (368)
T 4eyg_A 4 EDTFKVGLIVPMTGGQASTGKQIDNAIKLYIKKHGDTVAGKKIEVILKDDAA--------IPDNTKRLAQELIVNDKVNV 75 (368)
T ss_dssp CCEEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHCSEETTEEEEEEEEECTT--------CHHHHHHHHHHHHHTSCCSE
T ss_pred CCcEEEEEEeCCcCcchhccHHHHHHHHHHHHHcCCCCCCeEEEEEEeCCCC--------CHHHHHHHHHHHHhcCCcEE
Confidence 3568999997653211 123345556666554 234455666666532 232222222333 58999
Q ss_pred EEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 008476 366 ILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 399 (564)
Q Consensus 366 IllpGGfG~r~~eg~i~~ir~a~e~~iPiLGICL 399 (564)
||-|-+ . .....+...+.+.++|++..+.
T Consensus 76 iiG~~~--s---~~~~~~~~~~~~~~ip~i~~~~ 104 (368)
T 4eyg_A 76 IAGFGI--T---PAALAAAPLATQAKVPEIVMAA 104 (368)
T ss_dssp EEECSS--H---HHHHHHHHHHHHHTCCEEESSC
T ss_pred EECCCc--c---HHHHHHHHHHHhCCceEEeccC
Confidence 884432 1 2233455666778999987753
No 415
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=30.05 E-value=39 Score=31.15 Aligned_cols=37 Identities=22% Similarity=0.138 Sum_probs=29.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~-~~g~~v~~~k~d 40 (564)
++|+++|. +|-||-..+..|...|. ..|+++..+.-|
T Consensus 26 ~~i~~~G~--~GsGKsT~~~~l~~~l~~~~g~~~~~~~~d 63 (211)
T 1m7g_A 26 LTIWLTGL--SASGKSTLAVELEHQLVRDRRVHAYRLDGD 63 (211)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCCCEEEECHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHhccccCCcEEEECCh
Confidence 68899986 89999999999999998 888876555433
No 416
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=29.86 E-value=48 Score=31.77 Aligned_cols=45 Identities=20% Similarity=0.189 Sum_probs=29.3
Q ss_pred ccCCCEEEeCCCCCCC-chhHHHHHHH-HHHHcCCCEEEEehhHHHHH
Q 008476 360 LKGADGILVPGGFGNR-GVQGKILAAK-YAREHRIPYLGICLGMQVAV 405 (564)
Q Consensus 360 L~~~DGIllpGGfG~r-~~eg~i~~ir-~a~e~~iPiLGICLGmQll~ 405 (564)
+.+.|+|.++-|||.- ++.--+..++ .|...++|++||+- ++.++
T Consensus 64 ~~dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~~iPl~gVs~-l~a~a 110 (218)
T 2a6a_A 64 VKDLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLNS-FEMTA 110 (218)
T ss_dssp GGGCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEECH-HHHHH
T ss_pred HHHCCEEEEEcCCCchHhHHHHHHHHHHHHHHcCCCEEEeCc-HHHHH
Confidence 3567999999999984 3321122222 34557999999995 55554
No 417
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=29.62 E-value=35 Score=33.26 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=26.4
Q ss_pred EEEEEeCCcc----------CCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVV----------SGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~----------s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-|+||||=- |--=-|-...+|.+.|..+|++|+++--.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6789999941 11112334556778888999999998543
No 418
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=29.52 E-value=53 Score=33.52 Aligned_cols=35 Identities=31% Similarity=0.308 Sum_probs=29.0
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
.++|+| -||-||-..+..+-..+..+|.+|.+ +||
T Consensus 37 ~~~i~G--~~G~GKs~~~~~~~~~~~~~~~~~~~--~D~ 71 (392)
T 4ag6_A 37 NWTILA--KPGAGKSFTAKMLLLREYMQGSRVII--IDP 71 (392)
T ss_dssp CEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEE--EES
T ss_pred ceEEEc--CCCCCHHHHHHHHHHHHHHCCCEEEE--EeC
Confidence 457777 58999999999998888889988877 576
No 419
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=29.51 E-value=33 Score=33.98 Aligned_cols=41 Identities=22% Similarity=0.425 Sum_probs=31.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (564)
+.|.|||| ||-||..+|..|...|...|+++..+-.|-|-.
T Consensus 6 ~iIgItG~--sGSGKSTva~~L~~~lg~~~~~~~vI~~D~~~r 46 (290)
T 1a7j_A 6 PIISVTGS--SGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHR 46 (290)
T ss_dssp CEEEEESC--C---CCTHHHHHHHHHHHHTCCEEEEEGGGGBS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCCeeEeecchhhc
Confidence 36889996 788999999999998888888888888887753
No 420
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=29.50 E-value=1.2e+02 Score=29.02 Aligned_cols=31 Identities=13% Similarity=0.210 Sum_probs=20.5
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 67 ~~vdGiI~~~~~~~~------~~~~~l~~~~iPvV~i 97 (295)
T 3hcw_A 67 RMVDAFILLYSKEND------PIKQMLIDESMPFIVI 97 (295)
T ss_dssp TCCSEEEESCCCTTC------HHHHHHHHTTCCEEEE
T ss_pred CCcCEEEEcCcccCh------HHHHHHHhCCCCEEEE
Confidence 589999998743221 3455566778888644
No 421
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=29.35 E-value=51 Score=32.23 Aligned_cols=34 Identities=38% Similarity=0.427 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|-|+||||- |-+.+.|.+.|.++|++|...-.||
T Consensus 10 ~~vlVTGat------GfIG~~l~~~Ll~~G~~V~~~~r~~ 43 (338)
T 2rh8_A 10 KTACVVGGT------GFVASLLVKLLLQKGYAVNTTVRDP 43 (338)
T ss_dssp CEEEEECTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 569999974 5666777777888999998754443
No 422
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=29.30 E-value=12 Score=34.53 Aligned_cols=104 Identities=16% Similarity=0.160 Sum_probs=59.0
Q ss_pred chHHHHHHHhhhcCCCCceEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCccccc-ccCCchhhhHHHH
Q 008476 280 LLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDAT-EKENPDAYKAAWK 358 (564)
Q Consensus 280 ~~~~w~~~~~~~~~~~~~~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~-~~~~p~~y~~~~~ 358 (564)
.++.++++++. .-+|+.+|-=+-+ ....+.|.- .++. -+..+|+..++++.. ....+.-|. + .
T Consensus 15 ~L~~Fk~~v~~------~~kIvf~Gs~GvC----tPFaeL~~Y-aiR~---~~~~FiP~~d~e~a~~l~~~~~G~~-~-~ 78 (157)
T 2r47_A 15 HLGVFREAVKD------AERIGFAGVPGVC----TPFAQLFAY-AVRD---KDNIFIPNTDFSKARKLEVTEYGVE-L-G 78 (157)
T ss_dssp HHHHHHHHTTT------CSEEEEEECTTTT----HHHHHHHHH-HTTT---SEEEEEETTCGGGCEEEEEETTEEE-E-E
T ss_pred HHHHHHHHhcC------CCeEEEECCCeee----cCHHhhhee-eeeC---CceEEcCCCChhHceEEEEecCceE-e-c
Confidence 45555555433 3489999865533 344443322 2333 266788877776421 000000110 0 0
Q ss_pred hc--cCCCEEEeCCCCCCCc----hhHHHHHHHHHHHcCCCEEEEeh
Q 008476 359 LL--KGADGILVPGGFGNRG----VQGKILAAKYAREHRIPYLGICL 399 (564)
Q Consensus 359 ~L--~~~DGIllpGGfG~r~----~eg~i~~ir~a~e~~iPiLGICL 399 (564)
.+ .++|.|+|-||-.-|. .+..-+.+....+++..+.|||+
T Consensus 79 ~~~~~~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCF 125 (157)
T 2r47_A 79 EISPGNVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCY 125 (157)
T ss_dssp EECCCCEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEh
Confidence 11 5899999999955443 36666777777666777999996
No 423
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=29.17 E-value=1.3e+02 Score=28.45 Aligned_cols=87 Identities=17% Similarity=0.160 Sum_probs=41.9
Q ss_pred CceEEEEEeccCCCcchH-HHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEeCCCC
Q 008476 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (564)
Q Consensus 296 ~~~~IavVGkY~~~~Day-~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIllpGGf 372 (564)
++.+||++-. ...+.| ..+++.++.+..+..+.+.+ .++.... +++...+..+.+ .++||||+.+..
T Consensus 4 ~~~~Igvi~~--~~~~~~~~~~~~g~~~~a~~~g~~~~~--~~~~~~~------~~~~~~~~~~~~~~~~vdgiii~~~~ 73 (304)
T 3o1i_D 4 SDEKICAIYP--HLKDSYWLSVNYGMVSEAEKQGVNLRV--LEAGGYP------NKSRQEQQLALCTQWGANAIILGTVD 73 (304)
T ss_dssp -CCEEEEEES--CSCSHHHHHHHHHHHHHHHHHTCEEEE--EECSSTT------CHHHHHHHHHHHHHHTCSEEEECCSS
T ss_pred CCcEEEEEeC--CCCCcHHHHHHHHHHHHHHHcCCeEEE--EcCCCCC------CHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4578998843 233343 35555555544444333333 3332110 111111122222 589999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 373 G~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.+ ... ..++.+. .++|+.-+
T Consensus 74 ~~-~~~---~~~~~~~-~~iPvV~~ 93 (304)
T 3o1i_D 74 PH-AYE---HNLKSWV-GNTPVFAT 93 (304)
T ss_dssp TT-SST---TTHHHHT-TTSCEEEC
T ss_pred hh-HHH---HHHHHHc-CCCCEEEe
Confidence 22 111 2345556 78998765
No 424
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=29.14 E-value=2e+02 Score=27.87 Aligned_cols=32 Identities=6% Similarity=-0.086 Sum_probs=19.3
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+++.. . ... ..++.+.+.++|+.-+
T Consensus 103 ~~vdgiIi~~~~-~-~~~---~~~~~~~~~~ip~V~~ 134 (342)
T 1jx6_A 103 SKSDYLIFTLDT-T-RHR---KFVEHVLDSTNTKLIL 134 (342)
T ss_dssp TTCSEEEECCSS-S-TTH---HHHHHHHHHCSCEEEE
T ss_pred cCCCEEEEeCCh-H-hHH---HHHHHHHHcCCCEEEE
Confidence 589999995422 1 112 3345566678997644
No 425
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=29.12 E-value=53 Score=29.59 Aligned_cols=33 Identities=27% Similarity=0.304 Sum_probs=23.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|| |+||||- ++||+.+ .+.|. +|++|.+.--++
T Consensus 4 M~-vlVtGas-g~iG~~~-----~~~l~-~g~~V~~~~r~~ 36 (202)
T 3d7l_A 4 MK-ILLIGAS-GTLGSAV-----KERLE-KKAEVITAGRHS 36 (202)
T ss_dssp CE-EEEETTT-SHHHHHH-----HHHHT-TTSEEEEEESSS
T ss_pred cE-EEEEcCC-cHHHHHH-----HHHHH-CCCeEEEEecCc
Confidence 45 8999984 6666654 45566 899999875554
No 426
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=29.03 E-value=50 Score=30.25 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=23.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeec
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKID 40 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~-~~g~~v~~~k~d 40 (564)
||-|+||||- ++||+.+ .+.|. ++|++|.+.-.+
T Consensus 5 mk~vlVtGas-g~iG~~~-----~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAA-GQIAQXL-----TATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTT-SHHHHHH-----HHHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCC-cHHHHHH-----HHHHHhcCCceEEEEecC
Confidence 4679999974 5555544 44444 899999887554
No 427
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=29.03 E-value=1.6e+02 Score=28.63 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=20.6
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 117 ~~vdGiIi~~~~~~~------~~~~~l~~~~iPvV~~ 147 (339)
T 3h5o_A 117 HRPDGVLITGLSHAE------PFERILSQHALPVVYM 147 (339)
T ss_dssp TCCSEEEEECSCCCT------THHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCH------HHHHHHhcCCCCEEEE
Confidence 589999998743222 2345566778998755
No 428
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=28.79 E-value=1.4e+02 Score=28.16 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=19.7
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+..... . ..++.+.+.++|+.-+
T Consensus 75 ~~vdgii~~~~~~~~--~---~~~~~~~~~~iPvV~~ 106 (293)
T 2iks_A 75 RQVDAIIVSTSLPPE--H---PFYQRWANDPFPIVAL 106 (293)
T ss_dssp TTCSEEEECCSSCTT--C---HHHHTTTTSSSCEEEE
T ss_pred cCCCEEEEeCCCCCc--H---HHHHHHHhCCCCEEEE
Confidence 589999998743221 1 2344455668887654
No 429
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=28.49 E-value=48 Score=32.53 Aligned_cols=34 Identities=32% Similarity=0.344 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|-|+||||- |-+.+.|.+.|.++|++|...-.||
T Consensus 6 ~~vlVTGat------GfIG~~l~~~L~~~G~~V~~~~r~~ 39 (337)
T 2c29_D 6 ETVCVTGAS------GFIGSWLVMRLLERGYTVRATVRDP 39 (337)
T ss_dssp CEEEETTTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEECCc
Confidence 569999974 5555667777778999998764443
No 430
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=28.48 E-value=1.9e+02 Score=27.96 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=19.7
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 118 ~~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~~ 148 (332)
T 2o20_A 118 KQVDGIVYMGSSLD---E---KIRTSLKNSRTPVVLV 148 (332)
T ss_dssp TTCSEEEECSSCCC---H---HHHHHHHHHCCCEEEE
T ss_pred CCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEE
Confidence 58999999774222 1 2344455668998655
No 431
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=28.40 E-value=48 Score=31.71 Aligned_cols=34 Identities=21% Similarity=0.109 Sum_probs=23.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~-g~~v~~~k~dp 41 (564)
|| |+||||- ..||+ .+-+.|..+ |++|.++--+|
T Consensus 1 M~-ilVtGat-G~iG~-----~l~~~L~~~~g~~V~~~~R~~ 35 (289)
T 3e48_A 1 MN-IMLTGAT-GHLGT-----HITNQAIANHIDHFHIGVRNV 35 (289)
T ss_dssp CC-EEEETTT-SHHHH-----HHHHHHHHTTCTTEEEEESSG
T ss_pred CE-EEEEcCC-chHHH-----HHHHHHhhCCCCcEEEEECCH
Confidence 45 8999975 44554 444456666 99999886654
No 432
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=28.33 E-value=1.6e+02 Score=28.53 Aligned_cols=33 Identities=9% Similarity=-0.146 Sum_probs=21.6
Q ss_pred cC--CCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KG--ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~--~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.+ +||||+.+... ......++.+.+.++|+.-+
T Consensus 60 ~~~~vdgiIi~~~~~----~~~~~~~~~~~~~~iPvV~~ 94 (332)
T 2rjo_A 60 KTGGNLVLNVDPNDS----ADARVIVEACSKAGAYVTTI 94 (332)
T ss_dssp HTTTCEEEEECCSSH----HHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCCEEEEeCCCH----HHHHHHHHHHHHCCCeEEEE
Confidence 46 99999976321 22234566677778998765
No 433
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=28.26 E-value=37 Score=32.29 Aligned_cols=31 Identities=29% Similarity=0.290 Sum_probs=23.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||-= +|||+. +.+.|-.+|++|.+.
T Consensus 21 k~vlITGas~~~giG~~-----~a~~l~~~G~~v~~~ 52 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIE-----AARGCAEMGAAVAIT 52 (267)
T ss_dssp CEEEETTCCSSSSHHHH-----HHHHHHHTSCEEEEC
T ss_pred CEEEEECCCCCCChHHH-----HHHHHHHCCCeEEEE
Confidence 7899999954 688764 456677889988764
No 434
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=27.98 E-value=1.8e+02 Score=27.73 Aligned_cols=33 Identities=24% Similarity=0.406 Sum_probs=20.8
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+.... ... ..++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~~~---~~~~~~~~~~iPvV~~ 89 (306)
T 2vk2_A 57 QGVDAIFIAPVVAT-GWE---PVLKEAKDAEIPVFLL 89 (306)
T ss_dssp HTCSEEEECCSSSS-SCH---HHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCChh-hHH---HHHHHHHHCCCCEEEe
Confidence 58999999874322 111 2445566778998654
No 435
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=27.89 E-value=43 Score=31.09 Aligned_cols=27 Identities=37% Similarity=0.417 Sum_probs=17.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-CCee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRV 34 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~-g~~v 34 (564)
..|.+||| +|=||-.+ ++.|+.+ |+.|
T Consensus 13 ~iIgltG~--~GSGKSTv----a~~L~~~lg~~v 40 (192)
T 2grj_A 13 MVIGVTGK--IGTGKSTV----CEILKNKYGAHV 40 (192)
T ss_dssp EEEEEECS--TTSSHHHH----HHHHHHHHCCEE
T ss_pred eEEEEECC--CCCCHHHH----HHHHHHhcCCEE
Confidence 35889999 45578554 5555555 7543
No 436
>2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, C shape; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} PDB: 2xja_A*
Probab=27.87 E-value=57 Score=35.21 Aligned_cols=32 Identities=28% Similarity=0.272 Sum_probs=28.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.|-||| +=||+.|++=|..+|++.|++|-.+
T Consensus 147 ~vI~VTG----TnGKTTT~~ml~~iL~~~G~~~g~~ 178 (535)
T 2wtz_A 147 TVIGITG----TSGKTTTTYLVEAGLRAAGRVAGLI 178 (535)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEeeC----CCChHHHHHHHHHHHHHCCCCEEEE
Confidence 6788898 5699999999999999999998765
No 437
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=27.80 E-value=94 Score=29.24 Aligned_cols=33 Identities=24% Similarity=0.164 Sum_probs=20.6
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+ .. ...++.+.+.++|+.-+
T Consensus 64 ~~vdgii~~~~~~~-~~---~~~~~~~~~~~iPvV~~ 96 (289)
T 3brs_A 64 RKPDVILLAAADYE-KT---YDAAKEIKDAGIKLIVI 96 (289)
T ss_dssp TCCSEEEECCSCTT-TT---HHHHTTTGGGTCEEEEE
T ss_pred hCCCEEEEeCCChH-Hh---HHHHHHHHHCCCcEEEE
Confidence 58999999874322 11 23445555678887654
No 438
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=27.73 E-value=37 Score=30.65 Aligned_cols=22 Identities=36% Similarity=0.505 Sum_probs=15.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHH
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGV 25 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ 25 (564)
+.|++||+ +|-||..++..|..
T Consensus 11 ~~I~l~G~--~GsGKSTv~~~La~ 32 (184)
T 1y63_A 11 INILITGT--PGTGKTSMAEMIAA 32 (184)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHH
Confidence 57999997 78899765554444
No 439
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=27.59 E-value=56 Score=31.64 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=25.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
+|-|+||||- |-+.+.|.+.|.++|++|.++-.+|
T Consensus 12 ~~~vlVTGat------G~iG~~l~~~L~~~G~~V~~~~r~~ 46 (321)
T 2pk3_A 12 SMRALITGVA------GFVGKYLANHLTEQNVEVFGTSRNN 46 (321)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred cceEEEECCC------ChHHHHHHHHHHHCCCEEEEEecCC
Confidence 3679999984 4555666777888899998865443
No 440
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=27.48 E-value=2.8e+02 Score=26.48 Aligned_cols=78 Identities=19% Similarity=0.211 Sum_probs=50.1
Q ss_pred ceEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCc
Q 008476 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (564)
Q Consensus 297 ~~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~ 376 (564)
.-+|.+||-- ..+-..|.++-+.+|+.. +.=.|+.-. +++-.. +.+..+|.|+|.. +
T Consensus 68 ~~~iLfVgTk---~~~~~~V~~~A~~~g~~~---v~~rwlgG~-LTN~~~-----------~~f~~PdlliV~D-p---- 124 (208)
T 1vi6_A 68 PSKILLVAAR---QYAHKPVQMFSKVVGSDY---IVGRFIPGT-LTNPML-----------SEYREPEVVFVND-P---- 124 (208)
T ss_dssp GGGEEEEECS---GGGHHHHHHHHHHHCCEE---EESSCCTTT-TTCTTS-----------TTCCCCSEEEESC-T----
T ss_pred CCEEEEEeCC---HHHHHHHHHHHHHhCCee---ecCEECCCc-ccChhh-----------HhhCCCCEEEEEC-C----
Confidence 4579999722 224557777777777764 234676532 222110 2346789999886 2
Q ss_pred hhHHHHHHHHHHHcCCCEEEEe
Q 008476 377 VQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 377 ~eg~i~~ir~a~e~~iPiLGIC 398 (564)
.....++++|..-++|+.|+|
T Consensus 125 -~~e~~ai~EA~~l~IPvIalv 145 (208)
T 1vi6_A 125 -AIDKQAVSEATAVGIPVVALC 145 (208)
T ss_dssp -TTTHHHHHHHHHTTCCEEEEE
T ss_pred -CcchhHHHHHHHhCCCEEEEe
Confidence 123468889999999999998
No 441
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=27.46 E-value=1.3e+02 Score=25.75 Aligned_cols=71 Identities=15% Similarity=0.214 Sum_probs=42.4
Q ss_pred CceEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhc--cCCCEEEe----C
Q 008476 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILV----P 369 (564)
Q Consensus 296 ~~~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L--~~~DGIll----p 369 (564)
++.||.+|+|-.. .-..+.+.|+..|+++.- .+.+- .++.+.+ ..+|-|++ |
T Consensus 7 r~~rILiVdD~~~---~~~~l~~~L~~~G~~v~~-------~a~~g------------~eAl~~~~~~~~DlvllDi~mP 64 (123)
T 2lpm_A 7 RRLRVLVVEDESM---IAMLIEDTLCELGHEVAA-------TASRM------------QEALDIARKGQFDIAIIDVNLD 64 (123)
T ss_dssp CCCCEEEESSSTT---TSHHHHHHHHHHCCCCCB-------CSCCH------------HHHHHHHHHCCSSEEEECSSSS
T ss_pred CCCEEEEEeCCHH---HHHHHHHHHHHCCCEEEE-------EECCH------------HHHHHHHHhCCCCEEEEecCCC
Confidence 5689999986543 335667788889988621 12211 1233333 47898875 4
Q ss_pred CCCCCCchhHHHHHHHHHHHcCCCEE
Q 008476 370 GGFGNRGVQGKILAAKYAREHRIPYL 395 (564)
Q Consensus 370 GGfG~r~~eg~i~~ir~a~e~~iPiL 395 (564)
|.- | +++++..++.++|++
T Consensus 65 ~~~---G----~el~~~lr~~~ipvI 83 (123)
T 2lpm_A 65 GEP---S----YPVADILAERNVPFI 83 (123)
T ss_dssp SCC---S----HHHHHHHHHTCCSSC
T ss_pred CCC---H----HHHHHHHHcCCCCEE
Confidence 432 2 245666667788854
No 442
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=27.37 E-value=1.2e+02 Score=29.59 Aligned_cols=31 Identities=19% Similarity=0.257 Sum_probs=20.1
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 115 ~~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~~ 145 (332)
T 2hsg_A 115 KQVDGIIFMSGNVT---E---EHVEELKKSPVPVVLA 145 (332)
T ss_dssp CSSCCEEECCSSCC---H---HHHHHHTTSSSCEEEE
T ss_pred CCCcEEEEecCCCC---H---HHHHHHHhCCCCEEEE
Confidence 57999999874322 1 3445555678898655
No 443
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=27.35 E-value=1.8e+02 Score=28.64 Aligned_cols=31 Identities=10% Similarity=0.216 Sum_probs=21.4
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+.... . ..++.+.+.++|+.-+
T Consensus 125 ~~vdGiI~~~~~~~---~---~~~~~l~~~~iPvV~i 155 (355)
T 3e3m_A 125 RRPEAMVLSYDGHT---E---QTIRLLQRASIPIVEI 155 (355)
T ss_dssp TCCSEEEEECSCCC---H---HHHHHHHHCCSCEEEE
T ss_pred CCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEE
Confidence 58999999764322 1 3456667789998765
No 444
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=27.24 E-value=50 Score=31.25 Aligned_cols=31 Identities=39% Similarity=0.534 Sum_probs=23.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
+|.++||||- +|||+. +.+.|.++|++|.+.
T Consensus 7 ~k~vlVTGas-~gIG~~-----~a~~l~~~G~~v~~~ 37 (264)
T 3i4f_A 7 VRHALITAGT-KGLGKQ-----VTEKLLAKGYSVTVT 37 (264)
T ss_dssp CCEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred cCEEEEeCCC-chhHHH-----HHHHHHHCCCEEEEE
Confidence 4789999985 677764 556677889988764
No 445
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=27.22 E-value=75 Score=29.85 Aligned_cols=38 Identities=24% Similarity=0.443 Sum_probs=32.0
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 008476 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (564)
Q Consensus 4 i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (564)
++++| -.|.||=.++..++..|. +|++|.++-.||--+
T Consensus 17 ~~~~G--kgGvGKTTl~~~La~~l~-~g~~v~vvd~D~~~~ 54 (262)
T 1yrb_A 17 VVFVG--TAGSGKTTLTGEFGRYLE-DNYKVAYVNLDTGVK 54 (262)
T ss_dssp EEEEC--STTSSHHHHHHHHHHHHT-TTSCEEEEECCSSCS
T ss_pred EEEeC--CCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCCcc
Confidence 44444 478999999999999999 999999999999644
No 446
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=27.14 E-value=32 Score=31.38 Aligned_cols=65 Identities=18% Similarity=0.146 Sum_probs=34.6
Q ss_pred HHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhh-HHHHhcc-CCCEEEeCCCCCCCchhHHHHHHHHHHHcCC
Q 008476 315 SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYK-AAWKLLK-GADGILVPGGFGNRGVQGKILAAKYAREHRI 392 (564)
Q Consensus 315 SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~-~~~~~L~-~~DGIllpGGfG~r~~eg~i~~ir~a~e~~i 392 (564)
.+.+.|+.+|+++... .+ ++ ++ + .-. .+.+.++ ++|-||.+||-|--..+-..++++.+.+..+
T Consensus 31 ~l~~~l~~~G~~v~~~-~i--v~-Dd-~---------~i~~al~~a~~~~~DlVittGG~s~g~~D~t~eal~~~~~~~l 96 (164)
T 3pzy_A 31 IITEWLAQQGFSSAQP-EV--VA-DG-S---------PVGEALRKAIDDDVDVILTSGGTGIAPTDSTPDQTVAVVDYLI 96 (164)
T ss_dssp HHHHHHHHTTCEECCC-EE--EC-SS-H---------HHHHHHHHHHHTTCSEEEEESCCSSSTTCCHHHHHHTTCSEEC
T ss_pred HHHHHHHHCCCEEEEE-EE--eC-CH-H---------HHHHHHHHHHhCCCCEEEECCCCCCCCCccHHHHHHHHhcccC
Confidence 5677888999876431 11 21 22 1 111 1223343 7999999997544322334455555544444
Q ss_pred C
Q 008476 393 P 393 (564)
Q Consensus 393 P 393 (564)
|
T Consensus 97 p 97 (164)
T 3pzy_A 97 P 97 (164)
T ss_dssp H
T ss_pred c
Confidence 4
No 447
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=26.98 E-value=1.5e+02 Score=27.88 Aligned_cols=31 Identities=13% Similarity=0.230 Sum_probs=19.4
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC 398 (564)
.++||||+.+...+ . ..++.+. .++|+.-+.
T Consensus 63 ~~vdgiI~~~~~~~---~---~~~~~l~-~~iPvV~~~ 93 (285)
T 3c3k_A 63 KMVDGVITMDALSE---L---PELQNII-GAFPWVQCA 93 (285)
T ss_dssp TCCSEEEECCCGGG---H---HHHHHHH-TTSSEEEES
T ss_pred CCCCEEEEeCCCCC---h---HHHHHHh-cCCCEEEEc
Confidence 58999999763211 1 2344455 789987653
No 448
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=26.35 E-value=1.5e+02 Score=26.76 Aligned_cols=96 Identities=19% Similarity=0.118 Sum_probs=55.8
Q ss_pred CceEEEEEeccCCC-cch--HHHHHHHHHHcCCcceeeeEEEEecCCCccccc-c-cCCc-hhhhHHHHhccCCCEEEeC
Q 008476 296 EPVRIAMVGKYTGL-SDA--YLSILKALLHASVDLRKKLVIDWIPACDLEDAT-E-KENP-DAYKAAWKLLKGADGILVP 369 (564)
Q Consensus 296 ~~~~IavVGkY~~~-~Da--y~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~-~-~~~p-~~y~~~~~~L~~~DGIllp 369 (564)
..+||=+-|.+... ++. +..+.+.|+..| .+.. ..+.+.. .+... . ..++ .-|..-.+.+.++|.||.=
T Consensus 10 ~~~kVYLAGp~~~~~~~~~~~~~i~~~l~~~G-~V~~---~~~~~p~-~~~~g~~~~~~~~~i~~~d~~~i~~aD~vva~ 84 (165)
T 2khz_A 10 APCSVYFCGSIRGGREDQALYARIVSRLRRYG-KVLT---EHVADAE-LEPLGEEAAGGDQFIHEQDLNWLQQADVVVAE 84 (165)
T ss_dssp CCCEEEEECCCSSCSHHHHHHHHHHHHHHHHS-EESG---GGTTTTS-SSCCSTTSTTCHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHHHHhcC-Cccc---ccccCch-hhccccccccCHHHHHHHHHHHHHhCCEEEEE
Confidence 34689898877633 333 668889999998 5521 1112111 11100 0 0011 1133333567899999874
Q ss_pred CCCCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 008476 370 GGFGNRGVQGKILAAKYAREHRIPYLGICL 399 (564)
Q Consensus 370 GGfG~r~~eg~i~~ir~a~e~~iPiLGICL 399 (564)
.+ ....|..--+-+|...++|+++.+-
T Consensus 85 ~~---~~d~Gt~~EiGyA~algKPVi~l~~ 111 (165)
T 2khz_A 85 VT---QPSLGVGYELGRAVALGKPILCLFR 111 (165)
T ss_dssp CS---SCCHHHHHHHHHHHHTCSSEEEEEC
T ss_pred CC---CCCCCHHHHHHHHHHCCCEEEEEEc
Confidence 43 2335666777889999999998863
No 449
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=26.32 E-value=2.8e+02 Score=25.90 Aligned_cols=33 Identities=27% Similarity=0.298 Sum_probs=20.6
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+... ... ...++.+.+.++|+.-+
T Consensus 56 ~~vdgiIi~~~~~-~~~---~~~~~~~~~~~iPvV~~ 88 (283)
T 2ioy_A 56 QKVDVLLINPVDS-DAV---VTAIKEANSKNIPVITI 88 (283)
T ss_dssp TTCSEEEECCSST-TTT---HHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCch-hhh---HHHHHHHHHCCCeEEEe
Confidence 5899999975321 111 23456667778998654
No 450
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=26.12 E-value=3.2e+02 Score=27.46 Aligned_cols=159 Identities=16% Similarity=0.145 Sum_probs=83.1
Q ss_pred hHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEeeCCCCCcchhccccccCCCC
Q 008476 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVP 237 (564)
Q Consensus 158 pf~ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~~~~l~~~~r~kisl~~~v~ 237 (564)
-|--|++|| | .+++++- .+.+.--|--+...+++-|.+.| +|+|++|....- .-+.++-.+.++
T Consensus 53 SFE~A~~~L----G-g~~i~l~------~~~ss~~kgEsl~DTarvLs~~~--~D~iviR~~~~~---~~~~la~~~~vP 116 (304)
T 3r7f_A 53 SFEVAEKKL----G-MNVLNLD------GTSTSVQKGETLYDTIRTLESIG--VDVCVIRHSEDE---YYEELVSQVNIP 116 (304)
T ss_dssp HHHHHHHHT----T-CEEEEEE------TTSTTSCSSSCHHHHHHHHHHHT--CCEEEEECSSTT---CHHHHHHHCSSC
T ss_pred hHHHHHHHC----C-CeEEEEC------cccccCCCCCCHHHHHHHHHHhc--CCEEEEecCChh---HHHHHHHhCCCC
Confidence 355666665 4 3355431 12333345558888999998876 499999987532 233344444443
Q ss_pred CCCeeeeCCCCCcccccHHHHHhhhHHHHHHHcCCCCCCCccchHHHHHHHhhhcCCCCceEEEEEeccCCCcchHHHHH
Q 008476 238 EQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSIL 317 (564)
Q Consensus 238 ~~~Vi~~~dvdtiy~vp~~L~~qG~~~~i~~~l~l~~~~~~~~~~~w~~~~~~~~~~~~~~~IavVGkY~~~~Day~SIi 317 (564)
||+.-|-+ .++=+..|-+-= -|.++++ .-+.+||++|||-.. ...-.|.+
T Consensus 117 ---VINagdg~-~~HPtQaLaDl~---Ti~e~~g----------------------~l~glkva~vGD~~~-~rva~Sl~ 166 (304)
T 3r7f_A 117 ---ILNAGDGC-GQHPTQSLLDLM---TIYEEFN----------------------TFKGLTVSIHGDIKH-SRVARSNA 166 (304)
T ss_dssp ---EEESCCTT-SCCHHHHHHHHH---HHHHHHS----------------------CCTTCEEEEESCCTT-CHHHHHHH
T ss_pred ---EEeCCCCC-CcCcHHHHHHHH---HHHHHhC----------------------CCCCCEEEEEcCCCC-cchHHHHH
Confidence 66663322 223222221100 0111111 123589999997531 12456999
Q ss_pred HHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCC
Q 008476 318 KALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPG 370 (564)
Q Consensus 318 ~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpG 370 (564)
.++...|+++.+ +.++.++.+... ...+++..+.++++|-|..-.
T Consensus 167 ~~~~~~G~~v~~------~~P~~~~~~~~~--~g~~~d~~eav~~aDvvyt~~ 211 (304)
T 3r7f_A 167 EVLTRLGARVLF------SGPSEWQDEENT--FGTYVSMDEAVESSDVVMLLR 211 (304)
T ss_dssp HHHHHTTCEEEE------ESCGGGSCTTCS--SCEECCHHHHHHHCSEEEECC
T ss_pred HHHHHcCCEEEE------ECCCccCcchhh--cCccCCHHHHhCCCCEEEecc
Confidence 999999987655 333333221100 001223345567788776643
No 451
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=26.12 E-value=39 Score=32.71 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=23.7
Q ss_pred EEEEEeCCc---------------cCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGV---------------VSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv---------------~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-++||||- -+++|+ +|...|..+|++|+++-
T Consensus 9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~-----aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 9 LNIMITAGPTREPLDPVRYISDHSSGKMGF-----AIAAAAARRGANVTLVS 55 (226)
T ss_dssp CEEEEEESBCEEESSSSEEEEECCCSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCcccCceeeccCCCccHHHH-----HHHHHHHHCCCEEEEEE
Confidence 679999995 233554 55677888999999863
No 452
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=26.03 E-value=50 Score=32.30 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=23.6
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++||||-= +|||+.+ .+.|-++|++|.+.
T Consensus 32 k~~lVTGasg~~GIG~ai-----a~~la~~G~~V~~~ 63 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGI-----AKAAREAGAELAFT 63 (293)
T ss_dssp CEEEEECCCSSSSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHH-----HHHHHHCCCEEEEE
Confidence 7899999964 5788764 45677889988765
No 453
>3da7_A Barnase circular permutant; circular permutant, protein-protein complex, endonuclease, cytoplasm, protein binding; 2.25A {Bacillus amyloliquefaciens}
Probab=25.97 E-value=50 Score=28.65 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=24.8
Q ss_pred ccceEEEccCCccccCCCCccccccCCCCCCCCcccchHhhHHHHhh
Q 008476 54 EHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDK 100 (564)
Q Consensus 54 ~hgev~v~~dg~e~dldlg~yerf~~~~~~~~~~~t~g~iy~~vi~k 100 (564)
..|++|+|.| ||+-|.-+..+ .-+|++.---.-|+.
T Consensus 26 ~dg~~y~T~D---------HY~tF~~i~~~--~~~n~~~~V~~Yl~~ 61 (111)
T 3da7_A 26 SDWLIYKTTD---------HYQTFTKIRCA--QVINTFDGVADYLQT 61 (111)
T ss_dssp TTCCEEEESS---------TTSCCEECCCS--SCCSHHHHHHHHHHH
T ss_pred CCCCEEEecc---------hhhhhhcchhh--hhcCCchHHHHHHHH
Confidence 4689999988 99999999877 445554433333333
No 454
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=25.86 E-value=36 Score=30.31 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=23.7
Q ss_pred chHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 15 GKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 15 gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
|=|.+-.|.+..|..+|++|+++-=.|.
T Consensus 9 GaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 9 GTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4478888999999999999999876654
No 455
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=25.81 E-value=41 Score=31.33 Aligned_cols=25 Identities=20% Similarity=0.493 Sum_probs=18.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL 32 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~ 32 (564)
|.|+||||- +|||+.++ +.|-.+|+
T Consensus 3 k~vlITGas-ggiG~~la-----~~l~~~G~ 27 (244)
T 2bd0_A 3 HILLITGAG-KGIGRAIA-----LEFARAAR 27 (244)
T ss_dssp EEEEEETTT-SHHHHHHH-----HHHHHHTT
T ss_pred CEEEEECCC-ChHHHHHH-----HHHHHhcC
Confidence 789999984 77777654 44556687
No 456
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=25.73 E-value=39 Score=30.84 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=26.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (564)
+.|.|||+ ||-||...+..|..++. .+..+-.|+|+-
T Consensus 22 ~~i~i~G~--~GsGKSTl~~~L~~~~~----~~~~i~~D~~~~ 58 (207)
T 2qt1_A 22 FIIGISGV--TNSGKTTLAKNLQKHLP----NCSVISQDDFFK 58 (207)
T ss_dssp EEEEEEES--TTSSHHHHHHHHHTTST----TEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHhcC----CcEEEeCCcccc
Confidence 57889997 57789887777665442 467777888764
No 457
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=25.58 E-value=42 Score=30.47 Aligned_cols=23 Identities=35% Similarity=0.414 Sum_probs=17.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHH
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGV 25 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ 25 (564)
|+.|.|||+ +|-||...+..|..
T Consensus 1 m~~i~i~G~--~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 1 MKRIGLTGN--IGCGKSTVAQMFRE 23 (204)
T ss_dssp CCEEEEEEC--TTSSHHHHHHHHHH
T ss_pred CeEEEEECC--CCcCHHHHHHHHHH
Confidence 678999998 78889765555444
No 458
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=25.39 E-value=62 Score=31.62 Aligned_cols=28 Identities=43% Similarity=0.488 Sum_probs=20.1
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 4 i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|+||||- |-+.+.+.+.|.++|++|.++
T Consensus 3 vlVTGat------G~iG~~l~~~L~~~G~~V~~~ 30 (338)
T 1udb_A 3 VLVTGGS------GYIGSHTCVQLLQNGHDVIIL 30 (338)
T ss_dssp EEEETTT------SHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCC------CHHHHHHHHHHHHCCCEEEEE
Confidence 8999973 444556666777789988764
No 459
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=25.31 E-value=59 Score=31.13 Aligned_cols=31 Identities=19% Similarity=0.293 Sum_probs=24.1
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv-~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-++|||+- -+|||++| .+.|-+.|.+|.+.
T Consensus 7 K~alVTGaa~~~GIG~ai-----A~~la~~Ga~Vvi~ 38 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGV-----AKVLDQLGAKLVFT 38 (256)
T ss_dssp CEEEEECCCSTTCHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCCCCchHHHHH-----HHHHHHCCCEEEEE
Confidence 789999975 35888765 56788899998775
No 460
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=25.30 E-value=46 Score=33.22 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=28.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
||..|++.| +.|==.-+-.|++.|++||+.|+++=-.
T Consensus 23 MRIL~~~~p---~~GHv~P~l~LA~~L~~rGh~Vt~~t~~ 59 (400)
T 4amg_A 23 MRALFITSP---GLSHILPTVPLAQALRALGHEVRYATGG 59 (400)
T ss_dssp CEEEEECCS---SHHHHGGGHHHHHHHHHTTCEEEEEECS
T ss_pred CeEEEECCC---chhHHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 788898877 3344344668899999999999997543
No 461
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=25.04 E-value=1.4e+02 Score=29.16 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=23.1
Q ss_pred hccCCCEEEeCCCCCCCchhHHHHH-HHHHHHcCCCEEEEe
Q 008476 359 LLKGADGILVPGGFGNRGVQGKILA-AKYAREHRIPYLGIC 398 (564)
Q Consensus 359 ~L~~~DGIllpGGfG~r~~eg~i~~-ir~a~e~~iPiLGIC 398 (564)
...+.|+++++. +......... ...+.+.++|++|.-
T Consensus 190 l~~~~d~i~~~~---d~~~~~~~~~i~~~~~~~~iPv~~~~ 227 (302)
T 3lkv_A 190 IAEKSDVIYALI---DNTVASAIEGMIVAANQAKTPVFGAA 227 (302)
T ss_dssp HHTTCSEEEECS---CHHHHHTHHHHHHHHHHTTCCEEESS
T ss_pred ccCCeeEEEEeC---CcchhhHHHHHHHHHhhcCCceeecc
Confidence 347899999876 2222222333 345677899999853
No 462
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=25.02 E-value=35 Score=32.56 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=24.8
Q ss_pred CE-EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 1 MK-YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 1 ~k-~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|| =|+||||- |-+.+.+.+.|.++|++|..+--
T Consensus 4 M~m~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 4 MKERVIITGAN------GQLGKQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp -CEEEEEESTT------SHHHHHHHHHSCTTTEEEEEECT
T ss_pred ceeEEEEECCC------CHHHHHHHHHHHhCCCEEEEecc
Confidence 45 69999974 56667777888888999888743
No 463
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=25.01 E-value=55 Score=32.17 Aligned_cols=34 Identities=26% Similarity=0.463 Sum_probs=25.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|-|+||||- |-+.+.|...|.++|++|..+-.+|
T Consensus 20 ~~vlVtGat------G~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 20 HMILVTGSA------GRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp -CEEEETTT------SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEEECCC------ChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 569999984 5666777788888999999875543
No 464
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=24.80 E-value=63 Score=30.28 Aligned_cols=30 Identities=30% Similarity=0.463 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|.|+||||- +|||+. +.+.|.++|++|.+.
T Consensus 14 k~vlItGas-ggiG~~-----la~~l~~~G~~V~~~ 43 (260)
T 3awd_A 14 RVAIVTGGA-QNIGLA-----CVTALAEAGARVIIA 43 (260)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 666654 556677789988776
No 465
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=24.71 E-value=67 Score=32.54 Aligned_cols=66 Identities=20% Similarity=0.136 Sum_probs=33.5
Q ss_pred ceEEEEEeccCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCcccc-c-c--cCCchhhhHHHHhcc--CCCEEEeCC
Q 008476 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDA-T-E--KENPDAYKAAWKLLK--GADGILVPG 370 (564)
Q Consensus 297 ~~~IavVGkY~~~~Day~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~-~-~--~~~p~~y~~~~~~L~--~~DGIllpG 370 (564)
++|||||| .+.. .-..+..+|.+.++++... + +. +.+.. . . ...+..|.+..+.|. ++|.|+|+-
T Consensus 26 ~irvgiiG-~G~~--~~~~~~~~~~~~~~~lvav----~-d~-~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~t 96 (361)
T 3u3x_A 26 ELRFAAVG-LNHN--HIYGQVNCLLRAGARLAGF----H-EK-DDALAAEFSAVYADARRIATAEEILEDENIGLIVSAA 96 (361)
T ss_dssp CCEEEEEC-CCST--THHHHHHHHHHTTCEEEEE----E-CS-CHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECC
T ss_pred CcEEEEEC-cCHH--HHHHHHHHhhcCCcEEEEE----E-cC-CHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeC
Confidence 47999998 4422 2235667777766665331 1 11 11100 0 0 001122444445554 589999977
Q ss_pred C
Q 008476 371 G 371 (564)
Q Consensus 371 G 371 (564)
-
T Consensus 97 p 97 (361)
T 3u3x_A 97 V 97 (361)
T ss_dssp C
T ss_pred C
Confidence 4
No 466
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=24.27 E-value=80 Score=25.35 Aligned_cols=33 Identities=30% Similarity=0.390 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g-~~v~~~k~dp 41 (564)
+-|+|+|+ .++|. ++...|..+| ++|.+.-.+|
T Consensus 6 ~~v~I~G~--G~iG~-----~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGA--GKIGQ-----MIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECC--SHHHH-----HHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECC--CHHHH-----HHHHHHHhCCCceEEEEeCCH
Confidence 56888886 55554 5666788889 8888765543
No 467
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=24.17 E-value=48 Score=32.47 Aligned_cols=34 Identities=29% Similarity=0.341 Sum_probs=22.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
++.|.|||+ ||-||..+|.-|. ..|+.| +-.|.+
T Consensus 75 ~~iI~I~G~--~GSGKSTva~~La----~lg~~~--id~D~~ 108 (281)
T 2f6r_A 75 LYVLGLTGI--SGSGKSSVAQRLK----NLGAYI--IDSDHL 108 (281)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHHH----HHTCEE--EEHHHH
T ss_pred CEEEEEECC--CCCCHHHHHHHHH----HCCCcE--EehhHH
Confidence 367999997 5778976655544 457643 555554
No 468
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=24.02 E-value=1.3e+02 Score=28.12 Aligned_cols=65 Identities=18% Similarity=0.113 Sum_probs=35.8
Q ss_pred CceEEEEE--ec---cCCCcchH-HHHHHHHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHH-HHhc-cCCCEEE
Q 008476 296 EPVRIAMV--GK---YTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAA-WKLL-KGADGIL 367 (564)
Q Consensus 296 ~~~~IavV--Gk---Y~~~~Day-~SIi~aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~-~~~L-~~~DGIl 367 (564)
+++||+|+ |+ .++ .|+- ..+.+.|+..|+++... .-++ ++ ++.-.++ .+.+ +++|-||
T Consensus 29 ~~~rvaIistGdEl~~G~-~Dsn~~~L~~~L~~~G~~v~~~---~iv~-Dd---------~~~I~~al~~a~~~~~DlVI 94 (185)
T 3rfq_A 29 VVGRALVVVVDDRTAHGD-EDHSGPLVTELLTEAGFVVDGV---VAVE-AD---------EVDIRNALNTAVIGGVDLVV 94 (185)
T ss_dssp CCEEEEEEEECHHHHTTC-CCSHHHHHHHHHHHTTEEEEEE---EEEC-SC---------HHHHHHHHHHHHHTTCSEEE
T ss_pred CCCEEEEEEECcccCCCC-cCcHHHHHHHHHHHCCCEEEEE---EEeC-CC---------HHHHHHHHHHHHhCCCCEEE
Confidence 45677766 33 233 4443 36777889999876431 1122 22 1222222 2333 5899999
Q ss_pred eCCCCCC
Q 008476 368 VPGGFGN 374 (564)
Q Consensus 368 lpGGfG~ 374 (564)
.+||-|-
T Consensus 95 ttGGts~ 101 (185)
T 3rfq_A 95 SVGGTGV 101 (185)
T ss_dssp EESCCSS
T ss_pred ECCCCCC
Confidence 9997443
No 469
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=24.00 E-value=1.6e+02 Score=27.55 Aligned_cols=31 Identities=10% Similarity=0.070 Sum_probs=18.2
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+... . . ..+..+.+.++|+.-+
T Consensus 67 ~~vdgiIi~~~~~----~-~-~~~~~~~~~~iPvV~~ 97 (289)
T 3g85_A 67 NSFDAAIIANISN----Y-D-LEYLNKASLTLPIILF 97 (289)
T ss_dssp TCCSEEEESSCCH----H-H-HHHHHHCCCSSCEEEE
T ss_pred cCCCEEEEecCCc----c-c-HHHHHhccCCCCEEEE
Confidence 4799999987311 1 1 2222334567888654
No 470
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=23.99 E-value=67 Score=32.62 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=31.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
||.+|+++| +.|==.-+-.|++.|+++|+.|+++--+.
T Consensus 1 MrIl~~~~~---~~GH~~p~l~la~~L~~~Gh~V~~~~~~~ 38 (416)
T 1rrv_A 1 MRVLLSVCG---TRGDVEIGVALADRLKALGVQTRMCAPPA 38 (416)
T ss_dssp CEEEEEEES---CHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CeEEEEecC---CCccHHHHHHHHHHHHHCCCeEEEEeCHH
Confidence 788888887 45555667789999999999999986554
No 471
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=23.98 E-value=1e+02 Score=31.19 Aligned_cols=39 Identities=26% Similarity=0.384 Sum_probs=33.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (564)
..|.+.|- ||-||=.+.+.|+.+++..|.+|.+.-.|.|
T Consensus 130 ~vi~lvG~--nGaGKTTll~~Lag~l~~~~g~V~l~g~D~~ 168 (328)
T 3e70_C 130 YVIMFVGF--NGSGKTTTIAKLANWLKNHGFSVVIAASDTF 168 (328)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCCEEEEEeeccc
Confidence 35667776 9999999999999999999999998876654
No 472
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=23.95 E-value=2.2e+02 Score=27.39 Aligned_cols=33 Identities=27% Similarity=0.257 Sum_probs=21.8
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+.... . ....++.+.+.++|+.-+
T Consensus 59 ~~vdgiii~~~~~~-~---~~~~~~~a~~~gipvV~~ 91 (316)
T 1tjy_A 59 QGYDAIIVSAVSPD-G---LCPALKRAMQRGVKILTW 91 (316)
T ss_dssp TTCSEEEECCSSSS-T---THHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEeCCCHH-H---HHHHHHHHHHCcCEEEEe
Confidence 68999998763221 1 123566677789998765
No 473
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=23.93 E-value=88 Score=29.78 Aligned_cols=30 Identities=13% Similarity=0.156 Sum_probs=18.9
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+. ..++.+.+ ++|+.-+
T Consensus 65 ~~vdgiIi~~~~~~~------~~~~~~~~-~iPvV~i 94 (289)
T 3k9c_A 65 ERCEAAILLGTRFDT------DELGALAD-RVPALVV 94 (289)
T ss_dssp TTEEEEEEETCCCCH------HHHHHHHT-TSCEEEE
T ss_pred CCCCEEEEECCCCCH------HHHHHHHc-CCCEEEE
Confidence 589999998743321 33444444 8888654
No 474
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=23.83 E-value=2.9e+02 Score=26.70 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=20.2
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+ . -...+.+.+.++|+.-+
T Consensus 118 ~~vdgiIi~~~~~~--~---~~~~~~~~~~~iPvV~~ 149 (338)
T 3dbi_A 118 LRCDAIMIYPRFLS--V---DEIDDIIDAHSQPIMVL 149 (338)
T ss_dssp TTCSEEEECCSSSC--H---HHHHHHHHHCSSCEEEE
T ss_pred CCCCEEEEeCCCCC--h---HHHHHHHHcCCCCEEEE
Confidence 58999999874322 1 12344555667897655
No 475
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=23.82 E-value=37 Score=31.90 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=21.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- +|||+.++- .|.. |++|.++-
T Consensus 6 k~vlITGas-~gIG~~~a~-----~l~~-g~~v~~~~ 35 (245)
T 3e9n_A 6 KIAVVTGAT-GGMGIEIVK-----DLSR-DHIVYALG 35 (245)
T ss_dssp CEEEEESTT-SHHHHHHHH-----HHTT-TSEEEEEE
T ss_pred CEEEEEcCC-CHHHHHHHH-----HHhC-CCeEEEEe
Confidence 679999985 788876653 3433 88877653
No 476
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=23.54 E-value=69 Score=30.97 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|=|+||||- |-+.+.|.+.|.++|++|..+--+
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTGGT------GFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC------cHHHHHHHHHHHhCCCEEEEEeCC
Confidence 569999974 666777778888899988876544
No 477
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=23.53 E-value=2.4e+02 Score=26.26 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=17.8
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHH-cCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYARE-HRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e-~~iPiLGI 397 (564)
.++||||+.+.... +... +.+.+ .++|+.-+
T Consensus 62 ~~vdgii~~~~~~~---~~~~---~~l~~~~~iPvV~~ 93 (289)
T 1dbq_A 62 KRVDGLLVMCSEYP---EPLL---AMLEEYRHIPMVVM 93 (289)
T ss_dssp TTCSEEEEECSCCC---HHHH---HHHHHTTTSCEEEE
T ss_pred CCCCEEEEEeccCC---HHHH---HHHHhccCCCEEEE
Confidence 58999998764322 1122 22323 57887654
No 478
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=23.44 E-value=64 Score=30.21 Aligned_cols=31 Identities=39% Similarity=0.538 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.|+||||- +|||+. +.+.|.++|++|.+.-
T Consensus 15 k~vlVTGas-~gIG~~-----~a~~l~~~G~~V~~~~ 45 (249)
T 3f9i_A 15 KTSLITGAS-SGIGSA-----IARLLHKLGSKVIISG 45 (249)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEc
Confidence 789999994 677754 5567778899988753
No 479
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=23.44 E-value=78 Score=31.05 Aligned_cols=34 Identities=38% Similarity=0.351 Sum_probs=24.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
||-|+||||- |-+.+.|.+.|.++|++|.++--+
T Consensus 21 ~~~vlVTGat------G~iG~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 21 MKKVFITGIC------GQIGSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp CCEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCc------cHHHHHHHHHHHHCCCEEEEEECC
Confidence 4569999974 445566677777889999887443
No 480
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=23.41 E-value=73 Score=33.98 Aligned_cols=57 Identities=19% Similarity=0.303 Sum_probs=37.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg 64 (564)
+.|-||| +=||-.|++=|+.+|+..|++.+.+ +-..+| ..|+..-....+++|.+=|
T Consensus 123 ~~IaVTG----TnGKTTTt~ml~~iL~~~g~~~~~~-~gg~~~-~~g~~~~~~~~d~~VlE~~ 179 (494)
T 4hv4_A 123 HGIAVAG----THGKTTTTAMLSSIYAEAGLDPTFV-NGGLVK-AAGTHARLGSSRYLIAEAD 179 (494)
T ss_dssp EEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEEE-EEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEec----CCChHHHHHHHHHHHHhcCCCCEEE-ECCccc-ccccccccCCCcEEEEEcc
Confidence 4688898 5699999999999999999975432 111112 1232211234688888765
No 481
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=23.39 E-value=97 Score=31.78 Aligned_cols=44 Identities=18% Similarity=0.199 Sum_probs=32.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc---ccCCCCCCCc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY---LNTDAGTMSP 52 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy---ln~d~gtm~p 52 (564)
+.|+|+|+ ||-||-..|..|...|. +.++-.|-| -..|-||-.|
T Consensus 8 ~lI~I~Gp--tgSGKTtla~~La~~l~-----~~iis~Ds~qvYr~~~i~Takp 54 (340)
T 3d3q_A 8 FLIVIVGP--TASGKTELSIEVAKKFN-----GEIISGDSMQVYQGMDIGTAKV 54 (340)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHTT-----EEEEECCSSTTBTTCCTTTTCC
T ss_pred ceEEEECC--CcCcHHHHHHHHHHHcC-----CceeccccccccccccccccCC
Confidence 47889997 67789888877776553 678888884 6677777554
No 482
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=23.38 E-value=71 Score=29.65 Aligned_cols=32 Identities=41% Similarity=0.612 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.|+||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 8 k~vlITGas-ggiG~~~-----a~~l~~~G~~V~~~~r 39 (244)
T 3d3w_A 8 RRVLVTGAG-KGIGRGT-----VQALHATGARVVAVSR 39 (244)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred cEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999984 6666654 4667778999877643
No 483
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=23.30 E-value=68 Score=29.64 Aligned_cols=32 Identities=38% Similarity=0.534 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-|+||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 6 k~vlVtGas-ggiG~~-----~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLITGAS-RGIGEA-----TARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 679999985 667654 45566778999887543
No 484
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=23.29 E-value=77 Score=31.56 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-|+||||- |-+.+.|.+.|.++|++|.++--+
T Consensus 25 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 25 NVALITGIT------GQDGSYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cEEEEECCC------chHHHHHHHHHHHCCCEEEEEECC
Confidence 679999974 444556666777789998876443
No 485
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=23.17 E-value=77 Score=33.23 Aligned_cols=45 Identities=22% Similarity=0.319 Sum_probs=31.8
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 008476 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (564)
Q Consensus 111 vqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggt-vgdies~pf~ea~rq~ 166 (564)
..++|.=-++|++.|++... +.|++|+ .||| +|+-.=.| ||++++
T Consensus 226 ~~iv~Dd~~~i~~~l~~a~~--------~~DlVit-tGG~s~g~~D~t~--~al~~~ 271 (402)
T 1uz5_A 226 MGVARDDKESLKALIEKAVN--------VGDVVVI-SGGASGGTKDLTA--SVIEEL 271 (402)
T ss_dssp EEEECSSHHHHHHHHHHHHH--------HCSEEEE-ECCC-----CHHH--HHHHHH
T ss_pred EEEeCCCHHHHHHHHHHHhh--------CCCEEEE-cCCCCCCCcccHH--HHHHhh
Confidence 35778878899999998863 4799887 8887 67655455 899887
No 486
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=23.14 E-value=1.2e+02 Score=30.37 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=39.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe--eecccccCC--CCC---CCccccceEEEccCC
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI--KIDPYLNTD--AGT---MSPFEHGEVFVLDDG 64 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~--k~dpyln~d--~gt---m~p~~hgev~v~~dg 64 (564)
+.|-||| +=||=.|++=|+.+|+..|++++.+ .+-.-+|.. -|+ ..--+..+++|.+=+
T Consensus 109 ~~IaVTG----TnGKTTTt~ll~~iL~~~g~~~~~~~g~~~~n~~~~~~~~~p~~~~~~~~~~~~V~E~s 174 (326)
T 3eag_A 109 WVLGVAG----THGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPNSQSPFFVIEAD 174 (326)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEEECSSEETTSSCSEECCCCCSSCTTSCCCEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceEEecceeccCCcceecCCccccccCCCCCEEEEEcc
Confidence 5788998 5699999999999999999998642 122222221 121 111246789999844
No 487
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=22.86 E-value=66 Score=31.51 Aligned_cols=30 Identities=37% Similarity=0.414 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (564)
|-|+||||- |-+.+.+.+.|.++|++|.++
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~ 32 (348)
T 1ek6_A 3 EKVLVTGGA------GYIGSHTVLELLEAGYLPVVI 32 (348)
T ss_dssp SEEEEETTT------SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCC------CHHHHHHHHHHHHCCCEEEEE
Confidence 579999974 455566667777789988775
No 488
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=22.85 E-value=71 Score=30.80 Aligned_cols=31 Identities=35% Similarity=0.279 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|-|+||||- |-+.+.|-+.|.++|++|.+.-
T Consensus 2 k~vlVTGat------G~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGT------GFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp CEEEEESTT------SHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCh------hHHHHHHHHHHHHCCCEEEEEE
Confidence 569999974 4455566666778899988653
No 489
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=22.74 E-value=39 Score=37.17 Aligned_cols=31 Identities=29% Similarity=0.513 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (564)
|.++||||- ||||+. +.+.|-++|.+|.+.-
T Consensus 20 k~~lVTGas-~GIG~a-----iA~~La~~Ga~Vv~~~ 50 (613)
T 3oml_A 20 RVAVVTGAG-AGLGRE-----YALLFAERGAKVVVND 50 (613)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEC-
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999996 788775 4566778899998753
No 490
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=22.71 E-value=1.3e+02 Score=29.58 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=19.4
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 008476 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (564)
Q Consensus 361 ~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGI 397 (564)
.++||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 121 ~~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~i 151 (348)
T 3bil_A 121 HGVDGIICVPNEEC---A---NQLEDLQKQGMPVVLV 151 (348)
T ss_dssp TTCSCEEECCCGGG---H---HHHHHHHHC-CCEEEE
T ss_pred CCCCEEEEeCCCCC---h---HHHHHHHhCCCCEEEE
Confidence 58999999773221 1 3455566678998655
No 491
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=22.68 E-value=85 Score=29.32 Aligned_cols=62 Identities=23% Similarity=0.371 Sum_probs=38.5
Q ss_pred cchHhhHHHHhhhhcCCCCCCee---EEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHH
Q 008476 89 TTGKIYQSVIDKERKGDYLGKTV---QVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALG 164 (564)
Q Consensus 89 t~g~iy~~vi~ker~g~ylg~tv---qviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggt-vgdies~pf~ea~r 164 (564)
|+|......+++ .|-+| .+||-=-++|++.|++.. ..++|++|+ .||| +|+--=.| ||++
T Consensus 49 sn~~~L~~~L~~------~G~~v~~~~iv~Dd~~~I~~al~~a~-------~~~~DlVIt-tGGts~g~~D~t~--eal~ 112 (185)
T 3rfq_A 49 HSGPLVTELLTE------AGFVVDGVVAVEADEVDIRNALNTAV-------IGGVDLVVS-VGGTGVTPRDVTP--ESTR 112 (185)
T ss_dssp SHHHHHHHHHHH------TTEEEEEEEEECSCHHHHHHHHHHHH-------HTTCSEEEE-ESCCSSSTTCCHH--HHHH
T ss_pred cHHHHHHHHHHH------CCCEEEEEEEeCCCHHHHHHHHHHHH-------hCCCCEEEE-CCCCCCCCcccHH--HHHH
Confidence 345555555544 24444 466766778999998874 136898887 7887 66544444 6665
Q ss_pred Hh
Q 008476 165 QF 166 (564)
Q Consensus 165 q~ 166 (564)
++
T Consensus 113 ~l 114 (185)
T 3rfq_A 113 EI 114 (185)
T ss_dssp TT
T ss_pred HH
Confidence 54
No 492
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=22.55 E-value=75 Score=28.47 Aligned_cols=47 Identities=17% Similarity=0.183 Sum_probs=25.6
Q ss_pred CCCCcEEEEeeCccccccCcc--hHHHHHHHhhhh---cCCCCEEEEEeeeeeee
Q 008476 137 EGPVDVCVIELGGTIGDIESM--PFIEALGQFSYR---VGPGNFCLIHVSLVPVL 186 (564)
Q Consensus 137 ~~~~d~~i~e~ggtvgdies~--pf~ea~rq~~~~---~~~~~~~~~h~~~vp~~ 186 (564)
..+||+|++.+|.- |+... -|.+.+++|-.. .++ +.-.|-++..|..
T Consensus 72 ~~~pd~Vvi~~G~N--D~~~~~~~~~~~l~~ii~~l~~~~p-~~~ii~~~~~P~~ 123 (200)
T 4h08_A 72 NTKFDVIHFNNGLH--GFDYTEEEYDKSFPKLIKIIRKYAP-KAKLIWANTTPVR 123 (200)
T ss_dssp HSCCSEEEECCCSS--CTTSCHHHHHHHHHHHHHHHHHHCT-TCEEEEECCCCCE
T ss_pred cCCCCeEEEEeeeC--CCCCCHHHHHHHHHHHHHHHhhhCC-CccEEEeccCCCc
Confidence 35799999999964 54322 255555555332 232 3444444544543
No 493
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.54 E-value=77 Score=29.19 Aligned_cols=34 Identities=44% Similarity=0.734 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (564)
|-|+||||- ++||+.+ .+.|.++|++|.+.-.++
T Consensus 3 k~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~r~~ 36 (242)
T 1uay_A 3 RSALVTGGA-SGLGRAA-----ALALKARGYRVVVLDLRR 36 (242)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHHTCEEEEEESSC
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEccCc
Confidence 679999985 7777654 456677899998865443
No 494
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=22.49 E-value=63 Score=28.67 Aligned_cols=24 Identities=25% Similarity=0.336 Sum_probs=19.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHH
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLL 27 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll 27 (564)
+.|+++|. ||-||...|.-|+..|
T Consensus 6 ~~i~l~G~--~GsGKst~a~~La~~l 29 (185)
T 3trf_A 6 TNIYLIGL--MGAGKTSVGSQLAKLT 29 (185)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHh
Confidence 57899997 9999988877777655
No 495
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=22.39 E-value=80 Score=31.52 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (564)
|-|+||||- |-+.+.|.+.|.++|++|.++--+
T Consensus 29 k~vlVtGat------G~IG~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGIT------GQDGSYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEEcCC------chHHHHHHHHHHHCCCEEEEEecC
Confidence 679999973 444556666777789998876443
No 496
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=22.32 E-value=97 Score=30.68 Aligned_cols=53 Identities=23% Similarity=0.226 Sum_probs=40.2
Q ss_pred HHHHHHHHCCCeeEEeeecccccCCCCCC-CccccceEEEccCCcc----ccCCCCcc
Q 008476 22 SIGVLLKACGLRVTCIKIDPYLNTDAGTM-SPFEHGEVFVLDDGGE----VDLDLGNY 74 (564)
Q Consensus 22 s~g~ll~~~g~~v~~~k~dpyln~d~gtm-~p~~hgev~v~~dg~e----~dldlg~y 74 (564)
-.+.+|++.||+|+.+.---|.+-+++.- .|..|==..|+-||.. +|.=+|.+
T Consensus 76 Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~ 133 (280)
T 2vfb_A 76 LIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTVLAVTFPGCQGPYLVDVGFGGM 133 (280)
T ss_dssp HHHHHHHHHTCEEEEEEEEECTTCCTTSCCCCSCEEEEEEECTTCSSCEEECSCSGGG
T ss_pred HHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCCCcEEEEEEECCeEEEEEEecCCCcc
Confidence 46789999999999987655655555433 5999999999999864 46666653
No 497
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=22.23 E-value=76 Score=31.25 Aligned_cols=33 Identities=30% Similarity=0.311 Sum_probs=20.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeec
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKID 40 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~-g~~v~~~k~d 40 (564)
|| |+||||- ++|| +.|.+.|.++ |++|..+-.+
T Consensus 1 Mk-vlVTGas-G~iG-----~~l~~~L~~~~g~~V~~~~r~ 34 (361)
T 1kew_A 1 MK-ILITGGA-GFIG-----SAVVRHIIKNTQDTVVNIDKL 34 (361)
T ss_dssp CE-EEEESTT-SHHH-----HHHHHHHHHHCSCEEEEEECC
T ss_pred CE-EEEECCC-chHh-----HHHHHHHHhcCCCeEEEEecC
Confidence 67 8999984 4444 4444445445 7888876443
No 498
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=22.20 E-value=82 Score=31.03 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=23.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
+|-|+||||- |-+.+.|.+.|.++|++|.++-.
T Consensus 27 ~~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITGVA------GFIGSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp CCEEEEETTT------SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEECCC------cHHHHHHHHHHHHCCCEEEEEeC
Confidence 3569999973 44556666777788998887644
No 499
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=22.17 E-value=75 Score=30.39 Aligned_cols=32 Identities=34% Similarity=0.485 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 33 k~vlVTGas-ggIG~~l-----a~~l~~~G~~V~~~~r 64 (279)
T 1xg5_A 33 RLALVTGAS-GGIGAAV-----ARALVQQGLKVVGCAR 64 (279)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEEC
Confidence 689999985 6777654 4556678999877543
No 500
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=22.15 E-value=72 Score=30.80 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 008476 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (564)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (564)
|-|+||||- |-+.+.|.+.|.++|++|..+-.
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 34 (315)
T 2ydy_A 3 RRVLVTGAT------GLLGRAVHKEFQQNNWHAVGCGF 34 (315)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CeEEEECCC------cHHHHHHHHHHHhCCCeEEEEcc
Confidence 569999974 55666777778889999987643
Done!