Query 008477
Match_columns 564
No_of_seqs 539 out of 4681
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 12:39:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008477.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008477hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0783 Uncharacterized conser 100.0 9.6E-36 2.1E-40 308.2 18.7 318 168-558 556-897 (1267)
2 KOG0511 Ankyrin repeat protein 100.0 4.4E-31 9.6E-36 252.8 20.3 416 5-517 8-431 (516)
3 KOG4350 Uncharacterized conser 99.9 3.5E-23 7.7E-28 200.4 7.4 185 332-554 34-228 (620)
4 PHA02713 hypothetical protein; 99.9 9.2E-23 2E-27 221.2 10.7 182 328-551 11-205 (557)
5 PHA03098 kelch-like protein; P 99.9 4.4E-22 9.6E-27 217.1 14.0 170 339-553 6-188 (534)
6 PHA02790 Kelch-like protein; P 99.9 1.2E-22 2.6E-27 217.2 9.0 139 336-517 16-157 (480)
7 KOG4441 Proteins containing BT 99.9 3E-22 6.4E-27 216.4 11.0 183 328-551 22-215 (571)
8 KOG4412 26S proteasome regulat 99.8 6.8E-21 1.5E-25 166.2 9.0 104 38-143 43-151 (226)
9 KOG4412 26S proteasome regulat 99.8 2.6E-20 5.7E-25 162.5 7.9 120 15-144 62-185 (226)
10 KOG4441 Proteins containing BT 99.8 2.5E-19 5.4E-24 193.8 11.0 139 167-306 33-184 (571)
11 PHA02790 Kelch-like protein; P 99.8 1.4E-19 3E-24 193.6 8.7 132 168-302 20-168 (480)
12 PHA02713 hypothetical protein; 99.8 8.9E-19 1.9E-23 190.2 12.1 135 168-305 23-172 (557)
13 KOG2838 Uncharacterized conser 99.7 4.7E-18 1E-22 157.0 10.6 257 170-488 130-398 (401)
14 KOG4591 Uncharacterized conser 99.7 4.4E-18 9.5E-23 150.3 7.4 182 330-550 54-252 (280)
15 PHA03098 kelch-like protein; P 99.7 1.4E-17 3E-22 181.9 12.0 135 167-305 6-154 (534)
16 PF00651 BTB: BTB/POZ domain; 99.7 1.2E-17 2.6E-22 142.4 7.1 105 336-474 4-110 (111)
17 KOG0509 Ankyrin repeat and DHH 99.7 4E-17 8.6E-22 168.7 10.9 128 8-145 59-192 (600)
18 KOG0509 Ankyrin repeat and DHH 99.7 1.6E-16 3.4E-21 164.3 11.3 132 4-144 89-225 (600)
19 PHA02791 ankyrin-like protein; 99.7 1.5E-15 3.3E-20 150.2 15.9 155 19-202 24-182 (284)
20 PHA02859 ankyrin repeat protei 99.7 8.6E-16 1.9E-20 146.2 12.4 110 18-137 44-164 (209)
21 PHA02878 ankyrin repeat protei 99.6 8E-16 1.7E-20 165.6 12.5 124 8-140 149-278 (477)
22 PHA02946 ankyin-like protein; 99.6 1.2E-15 2.6E-20 161.6 13.6 127 8-144 54-186 (446)
23 KOG0512 Fetal globin-inducing 99.6 5.6E-16 1.2E-20 134.5 8.4 125 7-141 77-208 (228)
24 PHA02874 ankyrin repeat protei 99.6 1.1E-15 2.4E-20 162.4 12.7 128 7-144 105-236 (434)
25 PHA02791 ankyrin-like protein; 99.6 1.7E-15 3.8E-20 149.8 12.2 171 7-194 44-219 (284)
26 PHA02741 hypothetical protein; 99.6 1.8E-15 3.8E-20 139.3 11.1 118 18-145 14-146 (169)
27 PHA02884 ankyrin repeat protei 99.6 2.3E-15 4.9E-20 149.0 12.2 119 18-145 25-151 (300)
28 PHA03100 ankyrin repeat protei 99.6 2.9E-15 6.4E-20 161.5 13.6 173 6-202 86-272 (480)
29 KOG0508 Ankyrin repeat protein 99.6 5.7E-16 1.2E-20 153.8 7.2 124 10-144 101-228 (615)
30 KOG4350 Uncharacterized conser 99.6 7.5E-16 1.6E-20 150.0 7.7 131 169-299 43-188 (620)
31 PHA02878 ankyrin repeat protei 99.6 2.3E-15 4.9E-20 162.0 12.2 126 7-142 182-311 (477)
32 KOG0502 Integral membrane anky 99.6 1.2E-15 2.6E-20 137.4 6.7 136 15-161 150-288 (296)
33 PHA02716 CPXV016; CPX019; EVM0 99.6 3.8E-15 8.2E-20 163.3 11.0 85 9-101 158-249 (764)
34 PHA02874 ankyrin repeat protei 99.6 1E-14 2.2E-19 155.2 14.1 130 5-144 47-203 (434)
35 PHA03095 ankyrin-like protein; 99.6 6.7E-15 1.4E-19 158.4 12.7 128 6-143 27-164 (471)
36 smart00225 BTB Broad-Complex, 99.6 4E-15 8.6E-20 121.0 8.2 90 344-468 1-90 (90)
37 PHA02875 ankyrin repeat protei 99.6 1.3E-14 2.7E-19 153.5 13.9 129 6-144 15-148 (413)
38 PHA02859 ankyrin repeat protei 99.6 9.9E-15 2.1E-19 139.0 10.7 107 22-141 18-133 (209)
39 KOG0195 Integrin-linked kinase 99.6 5.5E-15 1.2E-19 138.1 8.4 115 15-139 24-141 (448)
40 PHA02875 ankyrin repeat protei 99.6 2.3E-14 5E-19 151.5 14.3 170 7-202 49-224 (413)
41 PHA03100 ankyrin repeat protei 99.6 1.7E-14 3.8E-19 155.5 13.4 131 4-144 46-189 (480)
42 KOG0512 Fetal globin-inducing 99.6 8.6E-15 1.9E-19 127.2 8.6 110 32-143 62-175 (228)
43 PHA02798 ankyrin-like protein; 99.6 2.1E-14 4.6E-19 154.9 13.8 128 5-141 50-192 (489)
44 PHA02743 Viral ankyrin protein 99.6 7.2E-15 1.6E-19 134.6 8.2 120 15-144 10-141 (166)
45 PHA02989 ankyrin repeat protei 99.5 3.3E-14 7.2E-19 153.6 13.6 122 8-140 52-190 (494)
46 PHA02946 ankyin-like protein; 99.5 4.3E-14 9.2E-19 149.8 14.0 127 7-144 86-221 (446)
47 PHA02798 ankyrin-like protein; 99.5 2.8E-14 6E-19 154.0 11.5 128 7-143 19-157 (489)
48 PHA02743 Viral ankyrin protein 99.5 3.7E-14 8.1E-19 129.9 10.6 104 15-126 47-158 (166)
49 KOG2075 Topoisomerase TOP1-int 99.5 4.8E-14 1E-18 141.1 11.8 141 335-513 107-259 (521)
50 KOG0508 Ankyrin repeat protein 99.5 1.4E-14 3E-19 144.0 7.9 114 22-145 81-197 (615)
51 PHA02716 CPXV016; CPX019; EVM0 99.5 3.4E-14 7.4E-19 155.9 11.8 124 7-140 193-361 (764)
52 PLN03192 Voltage-dependent pot 99.5 3.4E-14 7.3E-19 162.1 12.1 128 6-144 538-668 (823)
53 PHA03095 ankyrin-like protein; 99.5 4.8E-14 1E-18 151.7 12.0 128 6-143 63-199 (471)
54 PHA02917 ankyrin-like protein; 99.5 6.1E-14 1.3E-18 154.5 11.7 136 7-144 49-242 (661)
55 PHA02795 ankyrin-like protein; 99.5 9.4E-14 2E-18 142.9 10.9 127 5-143 130-266 (437)
56 PHA02989 ankyrin repeat protei 99.5 1.2E-13 2.6E-18 149.3 11.8 130 7-144 89-269 (494)
57 KOG0510 Ankyrin repeat protein 99.5 6.2E-14 1.3E-18 148.0 8.9 124 17-148 265-394 (929)
58 PHA02876 ankyrin repeat protei 99.5 1.5E-13 3.3E-18 154.4 12.5 118 15-142 331-453 (682)
59 PHA02876 ankyrin repeat protei 99.5 1.7E-13 3.7E-18 154.0 12.5 118 15-142 365-487 (682)
60 PF12796 Ank_2: Ankyrin repeat 99.5 3.8E-13 8.2E-18 109.7 11.1 85 37-125 1-88 (89)
61 KOG4591 Uncharacterized conser 99.4 6.9E-13 1.5E-17 117.7 11.3 132 157-297 59-206 (280)
62 PF00651 BTB: BTB/POZ domain; 99.4 2.2E-13 4.8E-18 116.0 7.9 92 168-259 8-102 (111)
63 KOG4214 Myotrophin and similar 99.4 3.2E-13 7E-18 105.1 7.8 98 9-115 18-116 (117)
64 PHA02917 ankyrin-like protein; 99.4 9.2E-13 2E-17 145.3 14.2 125 8-140 14-194 (661)
65 KOG4682 Uncharacterized conser 99.4 6.3E-13 1.4E-17 130.0 10.9 124 336-496 63-188 (488)
66 PHA02741 hypothetical protein; 99.4 4.5E-13 9.7E-18 123.3 9.2 100 15-122 50-158 (169)
67 PHA02736 Viral ankyrin protein 99.4 2.4E-13 5.1E-18 123.2 6.2 116 17-144 9-139 (154)
68 PHA02884 ankyrin repeat protei 99.4 1.4E-12 3E-17 129.2 11.7 103 6-116 46-157 (300)
69 KOG0514 Ankyrin repeat protein 99.4 3.9E-13 8.4E-18 129.9 7.0 117 18-144 261-420 (452)
70 PHA02736 Viral ankyrin protein 99.4 7.1E-13 1.5E-17 120.0 7.9 98 18-123 48-153 (154)
71 KOG0510 Ankyrin repeat protein 99.4 3E-12 6.5E-17 135.5 13.3 187 5-201 100-327 (929)
72 KOG4177 Ankyrin [Cell wall/mem 99.4 1.2E-12 2.7E-17 146.5 10.6 132 15-148 464-623 (1143)
73 KOG4177 Ankyrin [Cell wall/mem 99.4 8.7E-13 1.9E-17 147.7 8.7 119 10-138 524-651 (1143)
74 KOG0502 Integral membrane anky 99.4 1.2E-12 2.7E-17 118.2 8.0 118 15-144 119-239 (296)
75 PHA02795 ankyrin-like protein; 99.4 2.1E-12 4.5E-17 133.1 10.6 119 15-145 100-235 (437)
76 PF12796 Ank_2: Ankyrin repeat 99.4 1.7E-12 3.6E-17 105.8 7.8 80 5-96 9-89 (89)
77 PHA02730 ankyrin-like protein; 99.4 2.2E-12 4.8E-17 139.2 10.9 124 7-141 360-506 (672)
78 smart00225 BTB Broad-Complex, 99.4 2.2E-12 4.8E-17 104.7 8.5 87 172-258 1-87 (90)
79 KOG0505 Myosin phosphatase, re 99.3 4.3E-12 9.4E-17 129.0 9.4 128 9-146 56-246 (527)
80 PHA02730 ankyrin-like protein; 99.3 5.3E-12 1.1E-16 136.3 10.4 128 10-145 24-169 (672)
81 KOG2075 Topoisomerase TOP1-int 99.3 1.3E-11 2.8E-16 123.9 12.1 133 168-301 112-263 (521)
82 KOG4214 Myotrophin and similar 99.3 6.6E-12 1.4E-16 97.9 7.5 98 36-136 5-105 (117)
83 PLN03192 Voltage-dependent pot 99.3 1.1E-11 2.4E-16 141.6 11.8 144 38-201 530-676 (823)
84 cd00204 ANK ankyrin repeats; 99.3 3.8E-11 8.2E-16 103.5 11.1 114 20-143 2-118 (126)
85 PF13637 Ank_4: Ankyrin repeat 99.3 7.1E-12 1.5E-16 91.6 5.3 54 25-86 1-54 (54)
86 KOG3676 Ca2+-permeable cation 99.2 2.1E-11 4.6E-16 129.8 8.9 113 22-144 181-321 (782)
87 PHA02792 ankyrin-like protein; 99.2 5.9E-11 1.3E-15 126.9 10.3 122 7-140 322-452 (631)
88 KOG0505 Myosin phosphatase, re 99.2 5E-11 1.1E-15 121.4 8.8 127 7-143 87-276 (527)
89 KOG0514 Ankyrin repeat protein 99.2 5.9E-11 1.3E-15 115.0 7.7 111 8-118 283-429 (452)
90 PF13857 Ank_5: Ankyrin repeat 99.2 3.1E-11 6.8E-16 88.8 4.4 54 52-105 1-56 (56)
91 TIGR00870 trp transient-recept 99.2 6.4E-11 1.4E-15 134.4 9.1 113 22-144 125-270 (743)
92 KOG0195 Integrin-linked kinase 99.1 1.1E-10 2.4E-15 109.6 8.5 104 12-123 53-160 (448)
93 PF13857 Ank_5: Ankyrin repeat 99.1 3.3E-11 7.2E-16 88.6 3.4 50 16-73 7-56 (56)
94 TIGR00870 trp transient-recept 99.1 9.9E-11 2.1E-15 132.9 8.9 118 15-142 42-219 (743)
95 PTZ00322 6-phosphofructo-2-kin 99.1 3.5E-10 7.6E-15 125.7 11.4 101 35-137 84-194 (664)
96 COG0666 Arp FOG: Ankyrin repea 99.1 7.2E-10 1.6E-14 106.1 12.0 125 15-149 63-198 (235)
97 KOG0511 Ankyrin repeat protein 99.1 3.3E-10 7.2E-15 110.1 9.1 257 8-312 51-317 (516)
98 KOG1710 MYND Zn-finger and ank 99.1 3.1E-10 6.6E-15 106.7 8.0 93 18-118 38-134 (396)
99 PHA02792 ankyrin-like protein; 99.1 5E-10 1.1E-14 119.9 10.1 110 6-123 352-480 (631)
100 KOG0507 CASK-interacting adapt 99.1 2.1E-10 4.5E-15 120.9 7.0 122 15-144 72-202 (854)
101 KOG0507 CASK-interacting adapt 99.0 3E-10 6.5E-15 119.7 5.3 118 17-144 41-161 (854)
102 COG0666 Arp FOG: Ankyrin repea 99.0 2.2E-09 4.7E-14 102.8 9.7 101 11-119 91-203 (235)
103 KOG0515 p53-interacting protei 98.9 1.4E-09 3.1E-14 109.9 7.5 99 37-136 554-655 (752)
104 PTZ00322 6-phosphofructo-2-kin 98.9 3.9E-09 8.5E-14 117.4 9.5 86 9-102 98-191 (664)
105 KOG4682 Uncharacterized conser 98.9 4E-09 8.6E-14 103.8 7.8 127 157-291 62-203 (488)
106 cd00204 ANK ankyrin repeats; 98.9 1.7E-08 3.7E-13 86.7 11.0 102 6-115 20-125 (126)
107 KOG0783 Uncharacterized conser 98.8 4.9E-09 1.1E-13 111.1 7.5 123 169-291 709-848 (1267)
108 KOG0515 p53-interacting protei 98.8 6.7E-09 1.4E-13 105.1 8.0 86 32-117 582-673 (752)
109 PF13637 Ank_4: Ankyrin repeat 98.8 1.6E-08 3.5E-13 73.8 6.0 51 66-116 1-54 (54)
110 KOG4369 RTK signaling protein 98.7 1.8E-08 3.9E-13 109.7 6.4 175 9-195 773-952 (2131)
111 KOG1710 MYND Zn-finger and ank 98.7 7.1E-08 1.5E-12 91.0 8.0 107 35-143 14-124 (396)
112 PF13606 Ank_3: Ankyrin repeat 98.6 3.8E-08 8.3E-13 61.9 4.0 30 65-94 1-30 (30)
113 PF00023 Ank: Ankyrin repeat H 98.6 1E-07 2.2E-12 61.6 4.5 33 65-97 1-33 (33)
114 KOG4369 RTK signaling protein 98.5 5.9E-08 1.3E-12 105.9 4.3 107 36-144 760-870 (2131)
115 KOG0818 GTPase-activating prot 98.4 7.6E-07 1.6E-11 89.9 7.4 88 18-107 120-208 (669)
116 KOG2384 Major histocompatibili 98.3 8.4E-07 1.8E-11 79.1 5.7 135 56-207 2-143 (223)
117 KOG0506 Glutaminase (contains 98.3 9.7E-07 2.1E-11 88.7 5.3 84 38-121 511-598 (622)
118 PF13606 Ank_3: Ankyrin repeat 98.2 1.4E-06 3E-11 54.7 3.0 30 24-61 1-30 (30)
119 KOG3676 Ca2+-permeable cation 98.2 5.8E-06 1.3E-10 89.0 9.1 84 36-119 243-331 (782)
120 KOG0705 GTPase-activating prot 98.1 7.4E-06 1.6E-10 84.4 7.7 93 32-124 623-722 (749)
121 PF00023 Ank: Ankyrin repeat H 98.1 2.7E-06 5.9E-11 54.9 3.0 33 24-64 1-33 (33)
122 KOG2716 Polymerase delta-inter 98.1 2E-05 4.4E-10 74.1 9.6 99 345-475 7-105 (230)
123 KOG0782 Predicted diacylglycer 98.0 6E-06 1.3E-10 84.6 5.8 96 14-117 888-988 (1004)
124 KOG0506 Glutaminase (contains 97.9 7E-06 1.5E-10 82.7 3.4 69 13-89 527-596 (622)
125 KOG2384 Major histocompatibili 97.9 2.2E-05 4.7E-10 70.3 5.9 71 15-93 2-73 (223)
126 KOG0522 Ankyrin repeat protein 97.9 2.9E-05 6.3E-10 79.8 7.1 64 15-86 45-108 (560)
127 KOG0705 GTPase-activating prot 97.7 5.2E-05 1.1E-09 78.3 5.9 66 20-93 656-721 (749)
128 KOG0522 Ankyrin repeat protein 97.7 9.5E-05 2.1E-09 76.1 7.8 82 37-118 24-111 (560)
129 KOG0782 Predicted diacylglycer 97.6 0.00012 2.7E-09 75.2 7.2 109 34-144 867-980 (1004)
130 KOG2838 Uncharacterized conser 97.6 7E-05 1.5E-09 70.5 4.5 69 340-415 128-196 (401)
131 KOG0818 GTPase-activating prot 97.6 0.00013 2.8E-09 74.2 6.6 65 15-87 156-221 (669)
132 KOG0521 Putative GTPase activa 97.2 0.00026 5.6E-09 79.1 4.5 93 15-115 644-741 (785)
133 PF02214 BTB_2: BTB/POZ domain 97.1 0.00064 1.4E-08 55.6 4.8 91 345-467 1-94 (94)
134 KOG1665 AFH1-interacting prote 97.1 0.0018 3.9E-08 59.5 7.1 96 342-469 8-105 (302)
135 KOG1987 Speckle-type POZ prote 96.9 0.0021 4.5E-08 64.7 7.4 108 351-496 109-219 (297)
136 KOG3473 RNA polymerase II tran 96.8 0.0072 1.6E-07 47.9 7.6 87 345-459 19-111 (112)
137 KOG3609 Receptor-activated Ca2 96.8 0.0018 3.9E-08 70.7 5.7 105 33-143 25-143 (822)
138 KOG0521 Putative GTPase activa 96.6 0.0019 4.2E-08 72.3 4.4 89 53-143 641-734 (785)
139 KOG2505 Ankyrin repeat protein 96.5 0.0047 1E-07 63.4 6.0 72 46-117 404-481 (591)
140 smart00248 ANK ankyrin repeats 96.5 0.0051 1.1E-07 36.9 4.0 29 65-93 1-29 (30)
141 PF11822 DUF3342: Domain of un 96.4 0.0065 1.4E-07 59.9 6.5 101 352-494 14-115 (317)
142 KOG0520 Uncharacterized conser 96.2 0.0035 7.5E-08 70.1 3.4 131 19-158 568-711 (975)
143 smart00512 Skp1 Found in Skp1 96.0 0.023 5.1E-07 47.3 7.0 97 345-460 4-104 (104)
144 PF02214 BTB_2: BTB/POZ domain 95.7 0.028 6.2E-07 45.8 6.0 80 173-253 1-86 (94)
145 KOG1724 SCF ubiquitin ligase, 95.6 0.11 2.3E-06 46.7 9.9 117 350-485 13-137 (162)
146 KOG0520 Uncharacterized conser 95.0 0.028 6.2E-07 63.1 4.8 58 35-93 610-668 (975)
147 KOG2714 SETA binding protein S 94.9 0.098 2.1E-06 53.2 8.1 93 345-471 13-111 (465)
148 KOG2716 Polymerase delta-inter 94.7 0.16 3.5E-06 48.2 8.5 78 173-251 7-88 (230)
149 KOG3609 Receptor-activated Ca2 94.7 0.063 1.4E-06 59.1 6.6 59 15-88 52-110 (822)
150 PF03931 Skp1_POZ: Skp1 family 94.7 0.13 2.9E-06 38.2 6.5 56 345-412 3-59 (62)
151 smart00248 ANK ankyrin repeats 94.7 0.037 8.1E-07 32.8 3.0 28 25-60 2-29 (30)
152 COG5201 SKP1 SCF ubiquitin lig 94.6 0.55 1.2E-05 39.6 10.3 120 345-483 4-130 (158)
153 PF03931 Skp1_POZ: Skp1 family 94.4 0.11 2.4E-06 38.7 5.5 55 173-230 3-58 (62)
154 KOG3473 RNA polymerase II tran 92.7 0.34 7.4E-06 38.7 5.6 78 173-251 19-110 (112)
155 PF01466 Skp1: Skp1 family, di 92.2 0.27 5.9E-06 38.5 4.6 50 445-494 13-62 (78)
156 KOG2714 SETA binding protein S 91.0 0.72 1.6E-05 47.2 7.3 66 173-239 13-82 (465)
157 KOG2505 Ankyrin repeat protein 90.9 0.24 5.3E-06 51.3 3.9 48 36-86 433-480 (591)
158 smart00512 Skp1 Found in Skp1 90.0 0.86 1.9E-05 37.8 5.9 58 173-231 4-63 (104)
159 PF07707 BACK: BTB And C-termi 88.3 0.35 7.6E-06 39.8 2.4 43 263-305 1-45 (103)
160 PF11822 DUF3342: Domain of un 87.5 0.78 1.7E-05 45.6 4.6 71 180-251 14-87 (317)
161 KOG2715 Uncharacterized conser 87.4 3.4 7.4E-05 36.7 7.9 104 340-475 18-122 (210)
162 KOG1665 AFH1-interacting prote 85.5 2.6 5.6E-05 39.4 6.5 90 171-261 9-104 (302)
163 KOG1987 Speckle-type POZ prote 85.5 0.69 1.5E-05 46.4 3.2 110 178-288 108-231 (297)
164 smart00875 BACK BTB And C-term 79.6 1.5 3.2E-05 35.6 2.5 43 263-305 1-45 (101)
165 KOG1778 CREB binding protein/P 78.5 1.6 3.4E-05 43.8 2.6 116 344-495 28-143 (319)
166 PF06128 Shigella_OspC: Shigel 78.0 4.5 9.7E-05 38.1 5.2 87 34-121 180-279 (284)
167 PF11929 DUF3447: Domain of un 67.3 10 0.00022 29.3 4.3 45 37-88 10-54 (76)
168 KOG1724 SCF ubiquitin ligase, 63.7 53 0.0012 29.6 8.6 109 178-288 13-125 (162)
169 PF07707 BACK: BTB And C-termi 54.9 5.2 0.00011 32.6 0.7 27 449-475 2-28 (103)
170 PF03158 DUF249: Multigene fam 51.1 29 0.00062 31.8 4.8 23 71-93 148-170 (192)
171 KOG2723 Uncharacterized conser 49.7 56 0.0012 31.0 6.7 98 341-470 6-105 (221)
172 PF06128 Shigella_OspC: Shigel 48.7 70 0.0015 30.4 6.9 44 38-88 158-201 (284)
173 KOG3840 Uncharaterized conserv 48.4 42 0.00091 33.1 5.7 88 343-461 96-185 (438)
174 COG5201 SKP1 SCF ubiquitin lig 39.9 2E+02 0.0044 24.6 7.7 115 172-289 3-121 (158)
175 KOG2715 Uncharacterized conser 39.4 66 0.0014 28.9 5.0 80 171-251 21-105 (210)
176 PF11929 DUF3447: Domain of un 32.6 60 0.0013 24.9 3.5 45 68-118 8-54 (76)
177 smart00875 BACK BTB And C-term 23.3 84 0.0018 24.9 3.0 27 449-475 2-28 (101)
No 1
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=100.00 E-value=9.6e-36 Score=308.20 Aligned_cols=318 Identities=20% Similarity=0.260 Sum_probs=216.4
Q ss_pred CCCCCeEEEecCeeechhhHhhcccChhHHHhccccccc------------cccceEEcCCCCHHHHHHHhhhHccCCc-
Q 008477 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRY------------RNEIRFSREKLSYPALYGLIHFFYSDRL- 234 (564)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e------------~~~~~i~l~~v~~~~~~~lL~ylYtg~~- 234 (564)
..++||+|.||+..|++||.||++||++|+++|....+. .....+.++++++..|+.+|+||||+..
T Consensus 556 ds~hDVtf~vg~~~F~aHKfIl~~rs~flrkL~l~~~~~s~~~dIY~~~~~~~~~~~~ve~i~p~mfe~lL~~iYtdt~~ 635 (1267)
T KOG0783|consen 556 DSFHDVTFYVGTSMFHAHKFILCARSSFLRKLLLQKKKSSVSNDIYIEEITQSHSTIRVEDIPPLMFEILLHYIYTDTLL 635 (1267)
T ss_pred cccceEEEEecCeecccceEEEEeccHHHHHHHHhhccccccceeeeecccccCceeeeccCCHHHHHHHHHHHhccccc
Confidence 568999999999999999999999999999999743322 1233455889999999999999999964
Q ss_pred -cCCcccHHHHHHHHhHhcHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHhhcCCCCCCCccchhHHHHHHHHhhhc
Q 008477 235 -EIAVDDMEDLVKICKVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARS 313 (564)
Q Consensus 235 -~i~~~~~~~ll~~a~~c~~~~L~~~l~~~l~~~~~a~~~~~~~L~~~~~~~i~~~~~v~~~~~l~~~l~~~~~~~~~~~ 313 (564)
+...++++..-. . .. -.-+.+.-..|-.+...++.++..+|......+.- +.++ ..+.....
T Consensus 636 ~P~heDdidci~f-s-~~-k~N~~qrtrtCeMl~~~lekf~l~el~~~~~s~~~------~~~~-~n~ia~~~------- 698 (1267)
T KOG0783|consen 636 SPWHEDDIDCIRF-S-PL-KENLSQRTRTCEMLANLLEKFHLAELLPFSVSRQP------LLSL-TNDIAQLY------- 698 (1267)
T ss_pred CCccccchhhhhc-c-cc-ccChhhcccHHHHHHHHHhhhhHHhhhhhhhhccc------hhhc-ccHHHHHh-------
Confidence 323343321100 0 00 11111112234445555566665555544333321 1111 11111111
Q ss_pred cCCCCcccccccccchhhhhcccccCCCCccEEEEe-CCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCc
Q 008477 314 NMDHNIDNGICKLSSSVEAMHISDHVDDLADVCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPC 392 (564)
Q Consensus 314 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~ 392 (564)
.+...+...+..-|+++.+ ||+.++||||+|+||++||..||.. .|.|+.. -.
T Consensus 699 -----------------~N~l~lsdh~e~~d~~i~~KDGkvl~aHkc~L~aRlEYF~smf~~--~w~E~sS-------~t 752 (1267)
T KOG0783|consen 699 -----------------NNFLVLSDHEETMDTVIKLKDGKVLKAHKCFLSARLEYFSSMFQF--VWMESSS-------IT 752 (1267)
T ss_pred -----------------cCeeEecCCccceeEEEEecCCcCcccceeEeeeHHHHHHHHHHH--HHhhhcc-------ce
Confidence 1112223335667888877 7778999999999999999999998 8988743 35
Q ss_pred EEcCCCCHHHHHHHhHhhcc-CCCCCCCCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHH
Q 008477 393 IEEHDLSKETFEKMIEYMYT-DGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVL 471 (564)
Q Consensus 393 i~l~~v~~~~~~~~l~~iYt-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l 471 (564)
+....+..+.|..+|+|+|+ ++. .+..+ .-..+++++++.+||+|.+.+||.+||..|
T Consensus 753 ~~~~p~~~e~m~ivLdylYs~d~~-~~~k~--------------------~~~~dF~~~il~iaDqlli~~Lk~Ice~~l 811 (1267)
T KOG0783|consen 753 VNLSPLTVEHMSIVLDYLYSDDKV-ELFKD--------------------LKESDFMFEILSIADQLLILELKSICEQSL 811 (1267)
T ss_pred eecCcchHHHHHHHHHHHHccchH-HHHhc--------------------cchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556679999999999995 444 44433 112448999999999999999999999999
Q ss_pred HhhccccChHHHHHHHHHHHhhcch----hhcchh--hHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 008477 472 LLHLEMVSPAELCHWLILSDMYAAI----VCSSLS--ILLVFLFSIFYGVLKQICLTLGKLLINLWVVDHIFLRLLSPTS 545 (564)
Q Consensus 472 ~~~l~~~~~~n~~~~l~~A~~~~~~----~c~~l~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (564)
.+.| +..||..++++|.+|+|+ .|.+|+ |+..+++.+-.+.+..-...-+.+.+++++. ......
T Consensus 812 l~kl---~lk~~~~llefaamY~ak~L~~~C~dfic~N~~~~Learsi~~~dg~~LK~l~~~yrkm~~------vfD~Rv 882 (1267)
T KOG0783|consen 812 LRKL---NLKTLPTLLEFAAMYHAKELYSRCIDFICHNIEFFLEARSISEWDGFHLKKLAQRYRKMLS------VFDQRV 882 (1267)
T ss_pred HhHh---cccchHHHHHHHHHhhHHHHHHHHHHHHHHhHHHHHHhccHhhhcchHHHHHHHHHHHHhh------hcccee
Confidence 9888 999999999999999988 888887 8888888777666553333344444554443 223556
Q ss_pred CCCC--cccchhhhh
Q 008477 546 QNPS--SKFKHRYAI 558 (564)
Q Consensus 546 ~~~~--~~~~~~~~~ 558 (564)
..|+ ++..+|+.|
T Consensus 883 itP~ea~~d~~~L~i 897 (1267)
T KOG0783|consen 883 ITPSEASKDANRLLI 897 (1267)
T ss_pred ecccccccccceEEe
Confidence 6777 555566554
No 2
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=4.4e-31 Score=252.85 Aligned_cols=416 Identities=29% Similarity=0.388 Sum_probs=284.7
Q ss_pred chhhHHhhcCCCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q 008477 5 RQSTIDAELDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARM 84 (564)
Q Consensus 5 ~~~~l~~~~~g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~ 84 (564)
..|+++..+...+++.+|.....|+.+.+..+|.+||+.|+.+.|++|++.|+++|.+|.+..+||.+|+.+||.++|++
T Consensus 8 ~~~~~~~dl~dk~mD~~~~~~s~~~~~~~f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvkl 87 (516)
T KOG0511|consen 8 SSWTLESDLEDKDMDLQDYKPSVPLKKVPFGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKL 87 (516)
T ss_pred cchhhhcchhhhhcchhhcCcccccccCchHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHH
Confidence 34888888888899999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCccCCCCchHHHHchHHHHHHHHhccCCCCCCCccccccccchhccccccchhhhhHHhhcccccccCCCC
Q 008477 85 LLESGAICSEHTFDGDRCHYAALNLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTSNGAS 164 (564)
Q Consensus 85 Ll~~ga~~~~~d~~g~tl~~aa~~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~l~~~~~~~~~~~l~~~~~~ 164 (564)
||++||-+.....+|..+||++.+..|...|+.+......- ..+|++.|+++++++...
T Consensus 88 LLenGAiC~rdtf~G~RC~YgaLnd~IR~mllsydi~KA~d---------------------~~qP~aahi~s~l~dt~l 146 (516)
T KOG0511|consen 88 LLENGAICSRDTFDGDRCHYGALNDRIRRMLLSYDILKAFD---------------------ARQPPAAHIQSSLRDTFL 146 (516)
T ss_pred HHHcCCcccccccCcchhhhhhhhHHHHHHHHHHHHHHHhh---------------------ccCCcchHHHHHhhcccc
Confidence 99999999998999999999999999999998875432110 123445677767666544
Q ss_pred CCCCCCCCeEEEe-cCeeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHccCCccCCcccHHH
Q 008477 165 NSDSFPPDVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMED 243 (564)
Q Consensus 165 ~~~~~~~Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ 243 (564)
- ...|++|.. .|+.|.|||..|++||.+|...+..-|. +..+|.-..+-+.+|..+++|+|-..-.+-.+....
T Consensus 147 ~---~~~di~f~~q~g~~f~ahkfll~arSs~~~~k~v~~~~--~~heI~~~~v~~~~f~~flk~lyl~~na~~~~qyna 221 (516)
T KOG0511|consen 147 G---CCHDIDFLQQEGANFDAHKFLLEARSSNYFPKDVMFYV--QGHEIEAHRVILSAFSPFLKQLYLNTNAEWKDQYNA 221 (516)
T ss_pred c---cccchHHHhhccccccHHHHHHHhhhcccCchhhhhcc--ccCchhhhhhhHhhhhHHHHHHHHhhhhhhhhHHHH
Confidence 2 245999887 7788999999999999998765544332 233454446788999999999998743333444566
Q ss_pred HHHHHhHhcHHHHHHHHHH--HHHHHHHHHHcCcHHHHHHHHHHHhhcCCCCCCCccchhHHHHHHHHhhhccCCCCccc
Q 008477 244 LVKICKVCKCESLQRIIEK--ELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARSNMDHNIDN 321 (564)
Q Consensus 244 ll~~a~~c~~~~L~~~l~~--~l~~~~~a~~~~~~~L~~~~~~~i~~~~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 321 (564)
++.+...++.+.+...++. --...+....+++.... ..+..++......+...+.
T Consensus 222 llsi~~kF~~e~l~~~~~kdr~~~~sR~~k~~q~~~tq--------------------~~~~~~Li~~~~~~ykt~~--- 278 (516)
T KOG0511|consen 222 LLSIEVKFSKEKLSLEISKDRMEDLSRICKVCQCESTQ--------------------KIIEKELIHQRYAEYKTHR--- 278 (516)
T ss_pred HHhhhhhccHHHhHHHHhhhHHHHHHHHHHHHhHHHHH--------------------HHHHHHHHHHHhhhhccch---
Confidence 7777655544444444431 01111121222222111 1222221111111111100
Q ss_pred ccccccchhhhhcccccCCCCccEEEEeCCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHH
Q 008477 322 GICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKE 401 (564)
Q Consensus 322 ~~~~l~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~ 401 (564)
++.+. .++.+.-.+.+ +.+.+++ ..|||++++ .|++||+.||.+ +|.|+.. .+..+...++.....
T Consensus 279 ---dl~Ns--~~~~fsl~~ay--iql~~~~-RyP~hla~i-~R~eyfk~mf~g--~f~e~s~---n~~~p~lslp~~~~~ 344 (516)
T KOG0511|consen 279 ---DLDNS--PMKRFSLQGAY--IQLPEED-RYPAHLARI-LRVEYFKSMFVG--DFIESSV---NDTRPGLSLPSLADV 344 (516)
T ss_pred ---hhccC--hhheeeecccc--ccccccc-cccHHHHHH-HHHHHHHHHhcc--chhhhcC---CccccccccchHHHH
Confidence 00000 01111111111 3333333 499999999 799999999998 8998642 345567778888899
Q ss_pred HHHHHhHhhccCCCCCCCCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChh--h-HHHHHHHHHHhhcccc
Q 008477 402 TFEKMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLF--P-LKRAVADVLLLHLEMV 478 (564)
Q Consensus 402 ~~~~~l~~iYt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~--~-L~~~c~~~l~~~l~~~ 478 (564)
+++.+++|+|+++- ++..+ .+.+++-.|+++.++ + |+.++-..|.+....+
T Consensus 345 vveI~lr~lY~d~t-di~~~-------------------------~A~dvll~ad~lal~~dr~Lkt~as~~itq~~e~i 398 (516)
T KOG0511|consen 345 VVEIDLRNLYCDQT-DIIFD-------------------------VASDVLLFADKLALADDRLLKTAASAEITQWLELI 398 (516)
T ss_pred HHHHHHHHhhcccc-cchHH-------------------------HHhhHHHHhhHhhhhhhhhhhhhhhHHHHHHHHHH
Confidence 99999999999999 78777 889999999998665 2 6666666665554322
Q ss_pred ChHHHHHHHHHHHhhcchhhcchh--hHHHHHHHhhHHHHH
Q 008477 479 SPAELCHWLILSDMYAAIVCSSLS--ILLVFLFSIFYGVLK 517 (564)
Q Consensus 479 ~~~n~~~~l~~A~~~~~~~c~~l~--~~~~~~~~~~~~~l~ 517 (564)
+.-||..++. .||++. ++.+|...+....|.
T Consensus 399 d~y~V~dIl~--------~~wd~~~~rlEqfa~~~~a~hl~ 431 (516)
T KOG0511|consen 399 DMYGVLDILE--------YCWDLVACRLEQFAETHEARHLL 431 (516)
T ss_pred HhhhHHHHHH--------HHHHhhhHHHHHHHHHHHHHHHH
Confidence 2233333333 466664 677776666666554
No 3
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.88 E-value=3.5e-23 Score=200.44 Aligned_cols=185 Identities=23% Similarity=0.288 Sum_probs=156.0
Q ss_pred hhcccccCCCCccEEEEeCCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhc
Q 008477 332 AMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMY 411 (564)
Q Consensus 332 ~~~~~~~~~~~~Dv~~~~~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iY 411 (564)
++..+..+..++||+|+++++.|+|||.||++||+|||+|+.+ ||+++.+..|.+++...++|+.+|+|||
T Consensus 34 ~~~~l~~~e~y~DVtfvve~~rfpAHRvILAaRs~yFRAlLYg---------Gm~Es~q~~ipLq~t~~eAF~~lLrYiY 104 (620)
T KOG4350|consen 34 SFDELFTSEDYSDVTFVVEDTRFPAHRVILAARSSYFRALLYG---------GMQESHQQLIPLQETNSEAFRALLRYIY 104 (620)
T ss_pred HHHHHhhcCcccceEEEEeccccchhhhhHHHHHHHHHHHHhh---------hhhhhhhcccccccccHHHHHHHHHHHh
Confidence 4555677789999999999999999999999999999999998 5555666899999999999999999999
Q ss_pred cCCCCCCCCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHHHHHHH
Q 008477 412 TDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSD 491 (564)
Q Consensus 412 t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~ 491 (564)
||++ ++... .++..++.|.+|++|++..|...-..++.+.+ ..+|++.++..|.
T Consensus 105 tg~~-~l~~~----------------------~ed~lld~LslAh~Ygf~~Le~aiSeYl~~iL---~~~NvCmifdaA~ 158 (620)
T KOG4350|consen 105 TGKI-DLAGV----------------------EEDILLDYLSLAHRYGFIQLETAISEYLKEIL---KNENVCMIFDAAY 158 (620)
T ss_pred hcce-ecccc----------------------hHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH---cccceeeeeeHHH
Confidence 9999 66654 36689999999999999999999999999999 8999999999999
Q ss_pred hhcch----hhcchh--hHHHHHHHhhHHHHHHHHHHHHHHHHHH----HHHHHHHHHhcCCCCCCCCcccch
Q 008477 492 MYAAI----VCSSLS--ILLVFLFSIFYGVLKQICLTLGKLLINL----WVVDHIFLRLLSPTSQNPSSKFKH 554 (564)
Q Consensus 492 ~~~~~----~c~~l~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 554 (564)
.|+.. .|..+. |+..++..+.|..|... -++|++.. ..+-.+|+.+.+|..+||....|.
T Consensus 159 ly~l~~Lt~~C~mfmDrnA~~lL~~~sFn~LSk~---sL~e~l~RDsFfApE~~IFlAv~~W~~~Nske~~k~ 228 (620)
T KOG4350|consen 159 LYQLTDLTDYCMMFMDRNADQLLEDPSFNRLSKD---SLKELLARDSFFAPELKIFLAVRSWHQNNSKEASKV 228 (620)
T ss_pred HhcchHHHHHHHHHHhcCHHhhhcCcchhhhhHH---HHHHHHhhhcccchHHHHHHHHHHHHhcCchhhHHH
Confidence 99977 777776 78888888888777633 23333322 224468999999999999877764
No 4
>PHA02713 hypothetical protein; Provisional
Probab=99.88 E-value=9.2e-23 Score=221.23 Aligned_cols=182 Identities=13% Similarity=0.124 Sum_probs=144.7
Q ss_pred chhhhhcccccCCCCccEEEEeC-CeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHH
Q 008477 328 SSVEAMHISDHVDDLADVCVRVD-KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKM 406 (564)
Q Consensus 328 ~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~ 406 (564)
..++.|..++.++.+|||++.++ |+.|+|||.||+|+|+||++||.+ +|.|.. ..++|+|+++++++|+.+
T Consensus 11 ~~l~~l~~lr~~~~l~DV~L~v~~~~~f~~Hr~vLaa~S~YF~amF~~--~~~e~~------~~~~v~l~~v~~~~~~~l 82 (557)
T PHA02713 11 RVVSNISNLLDDDILCDVIITIGDGEEIKAHKTILAAGSKYFRTLFTT--PMIIRD------LVTRVNLQMFDKDAVKNI 82 (557)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCCCEEeehHHHHhhcCHHHHHHhcC--Cchhhc------cCceEEeccCCHHHHHHH
Confidence 34567788899999999999997 899999999999999999999998 555432 246899999999999999
Q ss_pred hHhhccCCCCCCCCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHH
Q 008477 407 IEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHW 486 (564)
Q Consensus 407 l~~iYt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~ 486 (564)
|+|+||+.+ +.+ ++.+||.+|++|+++.|++.|+++|.+.| +++||+.+
T Consensus 83 l~y~Yt~~i---~~~-------------------------nv~~ll~aA~~lqi~~l~~~C~~~l~~~l---~~~NCl~i 131 (557)
T PHA02713 83 VQYLYNRHI---SSM-------------------------NVIDVLKCADYLLIDDLVTDCESYIKDYT---NHDTCIYM 131 (557)
T ss_pred HHHhcCCCC---CHH-------------------------HHHHHHHHHHHHCHHHHHHHHHHHHHhhC---CccchHHH
Confidence 999999974 455 99999999999999999999999999999 99999999
Q ss_pred HHHHHhhcchhhcchh-hHHHHHHHhhHHHHHHHH-HHH----HHHHHH------HHHHHHHHHHhcCCCCCCCCcc
Q 008477 487 LILSDMYAAIVCSSLS-ILLVFLFSIFYGVLKQIC-LTL----GKLLIN------LWVVDHIFLRLLSPTSQNPSSK 551 (564)
Q Consensus 487 l~~A~~~~~~~c~~l~-~~~~~~~~~~~~~l~~~~-~~~----~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 551 (564)
+.+|..+. |..+. .+..++..+|.++.+... ..+ +.+++. ..-+..+|..+++|-.++|..|
T Consensus 132 ~~~~~~~~---~~~L~~~a~~~i~~~f~~v~~~~ef~~L~~~~l~~lL~~d~~l~v~~Ee~v~eav~~W~~~d~~~r 205 (557)
T PHA02713 132 YHRLYEMS---HIPIVKYIKRMLMSNIPTLITTDAFKKTVFEILFDIISTNDNVYLYREGYKVTILLKWLEYNYITE 205 (557)
T ss_pred HHHHHhcc---chHHHHHHHHHHHHHHHHHhCChhhhhCCHHHHHHHhccccccCCCcHHHHHHHHHHHHhcCHHHH
Confidence 99888888 66666 777777777766554221 111 122221 1224456677777777777543
No 5
>PHA03098 kelch-like protein; Provisional
Probab=99.87 E-value=4.4e-22 Score=217.12 Aligned_cols=170 Identities=17% Similarity=0.296 Sum_probs=139.9
Q ss_pred CCCCccEEEEe--CCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCC
Q 008477 339 VDDLADVCVRV--DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLK 416 (564)
Q Consensus 339 ~~~~~Dv~~~~--~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~ 416 (564)
++.+|||++.+ +|++|+|||.||+++|+||++||.+ +|. ..+|.+++ ++++|+.+|+|+|||++
T Consensus 6 ~~~~~Dv~l~~~~~~~~~~~Hk~vLaa~S~yF~~mf~~--~~~----------~~~i~l~~-~~~~~~~~l~y~Ytg~~- 71 (534)
T PHA03098 6 LQKFCDESIIIVNGGGIIKVHKIILSSSSEYFKKMFKN--NFK----------ENEINLNI-DYDSFNEVIKYIYTGKI- 71 (534)
T ss_pred cCCCCCEEEEEEcCCEEEEeHHHHHHhhhHHHHHHHhC--CCC----------CceEEecC-CHHHHHHHHHHhcCCce-
Confidence 68899999998 9999999999999999999999998 443 35899999 99999999999999999
Q ss_pred CCCCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHHHHHHHhhcch
Q 008477 417 DIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYAAI 496 (564)
Q Consensus 417 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~ 496 (564)
.++.+ ++.+|+.+|++|+++.|+..|+++|.+.| +.+||+.++.+|+.|+
T Consensus 72 ~i~~~-------------------------~~~~ll~~A~~l~~~~l~~~C~~~l~~~l---~~~nc~~~~~~a~~~~-- 121 (534)
T PHA03098 72 NITSN-------------------------NVKDILSIANYLIIDFLINLCINYIIKII---DDNNCIDIYRFSFFYG-- 121 (534)
T ss_pred EEcHH-------------------------HHHHHHHHHHHhCcHHHHHHHHHHHHHhC---CHhHHHHHHHHHHHcC--
Confidence 78887 99999999999999999999999999998 9999999999999999
Q ss_pred hhcchh-hHHHHHHHhhHHHHHHH-HHHHHHHHHHHH---------HHHHHHHHhcCCCCCCCCcccc
Q 008477 497 VCSSLS-ILLVFLFSIFYGVLKQI-CLTLGKLLINLW---------VVDHIFLRLLSPTSQNPSSKFK 553 (564)
Q Consensus 497 ~c~~l~-~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 553 (564)
|..+. .+..++..++.+..+.. ...+..+.+... -++.++..++.|-.++|..|.+
T Consensus 122 -~~~L~~~~~~~i~~nf~~v~~~~~f~~l~~~~l~~ll~~~~L~v~~E~~v~~av~~W~~~~~~~r~~ 188 (534)
T PHA03098 122 -CKKLYSAAYNYIRNNIELIYNDPDFIYLSKNELIKILSDDKLNVSSEDVVLEIIIKWLTSKKNNKYK 188 (534)
T ss_pred -cHHHHHHHHHHHHHHHHHHhcCchhhcCCHHHHHHHhcCCCcCcCCHHHHHHHHHHHHhcChhhhHh
Confidence 77776 66667777766555421 122222222222 3566788888888888776644
No 6
>PHA02790 Kelch-like protein; Provisional
Probab=99.87 E-value=1.2e-22 Score=217.19 Aligned_cols=139 Identities=14% Similarity=0.200 Sum_probs=123.1
Q ss_pred cccCCCCccEEEEeCCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEc--CCCCHHHHHHHhHhhccC
Q 008477 336 SDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEE--HDLSKETFEKMIEYMYTD 413 (564)
Q Consensus 336 ~~~~~~~~Dv~~~~~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l--~~v~~~~~~~~l~~iYt~ 413 (564)
++-.+.++||++.+ |++|+|||+||+|.|+||++||++ +|.|++ .+|.+ .++++++|+.+|+|+|||
T Consensus 16 ~~~~~~~~~~~~~~-~~~~~~HR~VLAa~S~YFraMF~~--~~~Es~--------~~v~~~~~~v~~~~l~~lldy~YTg 84 (480)
T PHA02790 16 LSMTKKFKTIIEAI-GGNIIVNSTILKKLSPYFRTHLRQ--KYTKNK--------DPVTRVCLDLDIHSLTSIVIYSYTG 84 (480)
T ss_pred HHhhhhhceEEEEc-CcEEeeehhhhhhcCHHHHHHhcC--Cccccc--------cceEEEecCcCHHHHHHHHHhheee
Confidence 45568899988777 779999999999999999999998 555542 23544 389999999999999999
Q ss_pred CCCCCCCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHHHHHHHhh
Q 008477 414 GLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMY 493 (564)
Q Consensus 414 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~ 493 (564)
++ .++.+ ++.+||.+|++||++.+++.|+++|.+.| +++||+.++.+|+.|
T Consensus 85 ~l-~it~~-------------------------nV~~ll~aA~~Lqi~~v~~~C~~fL~~~l---~~~NCl~i~~~A~~y 135 (480)
T PHA02790 85 KV-YIDSH-------------------------NVVNLLRASILTSVEFIIYTCINFILRDF---RKEYCVECYMMGIEY 135 (480)
T ss_pred eE-EEecc-------------------------cHHHHHHHHHHhChHHHHHHHHHHHHhhC---CcchHHHHHHHHHHh
Confidence 99 79988 99999999999999999999999999999 999999999999999
Q ss_pred cchhhcchh-hHHHHHHHhhHHHHH
Q 008477 494 AAIVCSSLS-ILLVFLFSIFYGVLK 517 (564)
Q Consensus 494 ~~~~c~~l~-~~~~~~~~~~~~~l~ 517 (564)
+ |.++. .+..|+..+|.++.+
T Consensus 136 ~---~~~L~~~a~~fi~~nF~~v~~ 157 (480)
T PHA02790 136 G---LSNLLCHTKDFIAKHFLELED 157 (480)
T ss_pred C---HHHHHHHHHHHHHHhHHHHhc
Confidence 9 88887 778888888887764
No 7
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=99.87 E-value=3e-22 Score=216.40 Aligned_cols=183 Identities=24% Similarity=0.339 Sum_probs=153.0
Q ss_pred chhhhhcccccCCCCccEEEEeCCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHh
Q 008477 328 SSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMI 407 (564)
Q Consensus 328 ~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l 407 (564)
..++.|+.++..+.+|||++.+++++|+|||.||+|.|+||++||.+ ++.++.+.+|.+.++++++++.++
T Consensus 22 ~~l~~l~~lr~~~~lcDv~L~v~~~~~~aHR~VLAa~S~YFraMFt~---------~l~e~~~~~i~l~~v~~~~l~~ll 92 (571)
T KOG4441|consen 22 FLLQGLNELREEGLLCDVTLLVGDREFPAHRVVLAACSPYFRAMFTS---------GLKESKQKEINLEGVDPETLELLL 92 (571)
T ss_pred HHHHHHHHHHHhCCCceEEEEECCeeechHHHHHHhccHHHHHHhcC---------CcccccceEEEEecCCHHHHHHHH
Confidence 34667888899999999999999999999999999999999999998 555566699999999999999999
Q ss_pred HhhccCCCCCCCCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHHH
Q 008477 408 EYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWL 487 (564)
Q Consensus 408 ~~iYt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~l 487 (564)
+|+||+.+ .++.+ ++.+|+.+|++|||+.+++.|.+||.++| +++||+.+.
T Consensus 93 ~y~Yt~~i-~i~~~-------------------------nVq~ll~aA~~lQi~~v~~~C~~fL~~~l---~~~Nclgi~ 143 (571)
T KOG4441|consen 93 DYAYTGKL-EISED-------------------------NVQELLEAASLLQIPEVVDACCEFLESQL---DPSNCLGIR 143 (571)
T ss_pred HHhhcceE-EechH-------------------------hHHHHHHHHHHhhhHHHHHHHHHHHHhcC---CHHHHHHHH
Confidence 99999999 79888 99999999999999999999999999999 999999999
Q ss_pred HHHHhhcchhhcchh-hHHHHHHHhhHHHHHHH-HHHHHHH-H--------HHHHHHHHHHHHhcCCCCCCCCcc
Q 008477 488 ILSDMYAAIVCSSLS-ILLVFLFSIFYGVLKQI-CLTLGKL-L--------INLWVVDHIFLRLLSPTSQNPSSK 551 (564)
Q Consensus 488 ~~A~~~~~~~c~~l~-~~~~~~~~~~~~~l~~~-~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~ 551 (564)
.+|+.|+ |.++. ....++..+|.++.++. +..+..+ + ++.--+..+|..+..|..+++..|
T Consensus 144 ~~a~~~~---~~~L~~~a~~~i~~~F~~v~~~eefl~L~~~~l~~ll~~d~l~v~~E~~vf~a~~~Wv~~d~~~R 215 (571)
T KOG4441|consen 144 RFAELHS---CTELLEVADEYILQHFAEVSKTEEFLLLSLEELIGLLSSDDLNVDSEEEVFEAAMRWVKHDFEER 215 (571)
T ss_pred HHHHhcC---cHHHHHHHHHHHHHHHHHHhccHHhhCCCHHHHHhhccccCCCcCCHHHHHHHHHHHHhcCHhhH
Confidence 9999999 88887 55558888887765532 2222222 1 222233456777777777777664
No 8
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=6.8e-21 Score=166.15 Aligned_cols=104 Identities=22% Similarity=0.237 Sum_probs=50.4
Q ss_pred HHHHhcCCHHHHHHHHH-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCccCCCCc-hHHHHc--hHHHH
Q 008477 38 FEASRAGDVDRLRYILE-SGVNVNARDQWDSVALYYACLAGHLDAARMLLES-GAICSEHTFDGDR-CHYAAL--NLKVR 112 (564)
Q Consensus 38 ~~Aa~~g~~~~v~~Ll~-~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t-l~~aa~--~~~i~ 112 (564)
||||..|+.+++.+|++ .++.+|.+|..||||||+|+..|+.++|+-|+.+ |+|+|..++.|.| +|||+. ..+|.
T Consensus 43 Hwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIa 122 (226)
T KOG4412|consen 43 HWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIA 122 (226)
T ss_pred eeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHH
Confidence 55555555555555443 3444444444455555555555555555555444 4555554444444 444444 44445
Q ss_pred HHHHhccCCCCCCCccccccccchhcccccc
Q 008477 113 KLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (564)
Q Consensus 113 ~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~ 143 (564)
++|+.+|+.++..+ ..|.||||.|+.-+.
T Consensus 123 qlLle~ga~i~~kD--~~~qtplHRAAavGk 151 (226)
T KOG4412|consen 123 QLLLEKGALIRIKD--KQGQTPLHRAAAVGK 151 (226)
T ss_pred HHHHhcCCCCcccc--cccCchhHHHHhccc
Confidence 55555554444433 444455554444443
No 9
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=2.6e-20 Score=162.49 Aligned_cols=120 Identities=26% Similarity=0.315 Sum_probs=113.2
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILES-GVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~-g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 93 (564)
+..+|.+|..||||| |.||..|+.++|+.|+.+ |+|+|..+..|.|+||||+..|..+++++|+++|+.++
T Consensus 62 nv~~ddkDdaGWtPl--------hia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~ 133 (226)
T KOG4412|consen 62 NVKPDDKDDAGWTPL--------HIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIR 133 (226)
T ss_pred CCCCCCccccCCchh--------hhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCc
Confidence 788999999999999 999999999999999997 99999999999999999999999999999999999999
Q ss_pred CccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 94 ~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
++|..|.| +|.||. +..++++|+..|+..+..+ +.|+||||.|..++|.
T Consensus 134 ~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qD--k~G~TpL~~al~e~~~ 185 (226)
T KOG4412|consen 134 IKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQD--KYGFTPLHHALAEGHP 185 (226)
T ss_pred ccccccCchhHHHHhccchhhHHHHHhcCCCCCccc--ccCccHHHHHHhccCc
Confidence 99999997 899998 8999999999999998877 9999999999666664
No 10
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=99.79 E-value=2.5e-19 Score=193.75 Aligned_cols=139 Identities=27% Similarity=0.460 Sum_probs=129.4
Q ss_pred CCCCCCeEEEecCeeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHccCCccCCcccHHHHHH
Q 008477 167 DSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVK 246 (564)
Q Consensus 167 ~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~ 246 (564)
.+.+|||++.+++++|+|||.|||++||||++||.++++|+...+|.+.++++.+++.+++|+|||.+.++.+++++++.
T Consensus 33 ~~~lcDv~L~v~~~~~~aHR~VLAa~S~YFraMFt~~l~e~~~~~i~l~~v~~~~l~~ll~y~Yt~~i~i~~~nVq~ll~ 112 (571)
T KOG4441|consen 33 EGLLCDVTLLVGDREFPAHRVVLAACSPYFRAMFTSGLKESKQKEINLEGVDPETLELLLDYAYTGKLEISEDNVQELLE 112 (571)
T ss_pred hCCCceEEEEECCeeechHHHHHHhccHHHHHHhcCCcccccceEEEEecCCHHHHHHHHHHhhcceEEechHhHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH---------hHhcHHHHHHHHH--HHHHHHHHHHHcCcHHHHHHHHHHHhhcCC-C-CCCCccchhHHHHH
Q 008477 247 IC---------KVCKCESLQRIIE--KELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PEEDRLPAALSRIL 306 (564)
Q Consensus 247 ~a---------~~c~~~~L~~~l~--~~l~~~~~a~~~~~~~L~~~~~~~i~~~~~-v-~~~~~l~~~l~~~~ 306 (564)
+| +.| ++||.+.+. ||++++.+|+.++|..|.+.+..|+.+||. | ..++|+..+...+.
T Consensus 113 aA~~lQi~~v~~~C-~~fL~~~l~~~Nclgi~~~a~~~~~~~L~~~a~~~i~~~F~~v~~~eefl~L~~~~l~ 184 (571)
T KOG4441|consen 113 AASLLQIPEVVDAC-CEFLESQLDPSNCLGIRRFAELHSCTELLEVADEYILQHFAEVSKTEEFLLLSLEELI 184 (571)
T ss_pred HHHHhhhHHHHHHH-HHHHHhcCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccHHhhCCCHHHHH
Confidence 99 677 899998765 999999999999999999999999999999 6 88888876665553
No 11
>PHA02790 Kelch-like protein; Provisional
Probab=99.79 E-value=1.4e-19 Score=193.62 Aligned_cols=132 Identities=15% Similarity=0.210 Sum_probs=116.4
Q ss_pred CCCCCeEEEecCeeechhhHhhcccChhHHHhccccccccccceEEc--CCCCHHHHHHHhhhHccCCccCCcccHHHHH
Q 008477 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSR--EKLSYPALYGLIHFFYSDRLEIAVDDMEDLV 245 (564)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l--~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll 245 (564)
+.+|||++.+++ .|+|||+|||+.||||++||.++++|+.. .+.+ .++++++++.+|+|+|||++.++.+|+++++
T Consensus 20 ~~~~~~~~~~~~-~~~~HR~VLAa~S~YFraMF~~~~~Es~~-~v~~~~~~v~~~~l~~lldy~YTg~l~it~~nV~~ll 97 (480)
T PHA02790 20 KKFKTIIEAIGG-NIIVNSTILKKLSPYFRTHLRQKYTKNKD-PVTRVCLDLDIHSLTSIVIYSYTGKVYIDSHNVVNLL 97 (480)
T ss_pred hhhceEEEEcCc-EEeeehhhhhhcCHHHHHHhcCCcccccc-ceEEEecCcCHHHHHHHHHhheeeeEEEecccHHHHH
Confidence 567899887754 89999999999999999999999998864 4444 3899999999999999999999999999999
Q ss_pred HHH---------hHhcHHHHHHHHH--HHHHHHHHHHHcCcHHHHHHHHHHHhhcCC-C-CC--CCccchhH
Q 008477 246 KIC---------KVCKCESLQRIIE--KELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PE--EDRLPAAL 302 (564)
Q Consensus 246 ~~a---------~~c~~~~L~~~l~--~~l~~~~~a~~~~~~~L~~~~~~~i~~~~~-v-~~--~~~l~~~l 302 (564)
.+| +.| ++||.+.++ ||++++.+|+.|++.+|.+.+.+||.+||. | .+ ++|+..++
T Consensus 98 ~aA~~Lqi~~v~~~C-~~fL~~~l~~~NCl~i~~~A~~y~~~~L~~~a~~fi~~nF~~v~~~~~~ef~~L~~ 168 (480)
T PHA02790 98 RASILTSVEFIIYTC-INFILRDFRKEYCVECYMMGIEYGLSNLLCHTKDFIAKHFLELEDDIIDNFDYLSM 168 (480)
T ss_pred HHHHHhChHHHHHHH-HHHHHhhCCcchHHHHHHHHHHhCHHHHHHHHHHHHHHhHHHHhcccchhhhhCCH
Confidence 999 577 888888876 899999999999999999999999999999 6 43 67765554
No 12
>PHA02713 hypothetical protein; Provisional
Probab=99.78 E-value=8.9e-19 Score=190.19 Aligned_cols=135 Identities=19% Similarity=0.283 Sum_probs=120.5
Q ss_pred CCCCCeEEEec-CeeechhhHhhcccChhHHHhccccccccc-cceEEcCCCCHHHHHHHhhhHccCCccCCcccHHHHH
Q 008477 168 SFPPDVVFYVQ-GRPIEAHRVILSARSVFFRRKFETDWRYRN-EIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLV 245 (564)
Q Consensus 168 ~~~~Dv~~~v~-~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~-~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll 245 (564)
+.+|||++.++ |+.|+|||.|||++|+||++||.++++|.. ..+|.+.++++++|+.+|+|+|||+ ++.+++++++
T Consensus 23 ~~l~DV~L~v~~~~~f~~Hr~vLaa~S~YF~amF~~~~~e~~~~~~v~l~~v~~~~~~~ll~y~Yt~~--i~~~nv~~ll 100 (557)
T PHA02713 23 DILCDVIITIGDGEEIKAHKTILAAGSKYFRTLFTTPMIIRDLVTRVNLQMFDKDAVKNIVQYLYNRH--ISSMNVIDVL 100 (557)
T ss_pred CCCCCEEEEeCCCCEEeehHHHHhhcCHHHHHHhcCCchhhccCceEEeccCCHHHHHHHHHHhcCCC--CCHHHHHHHH
Confidence 56789999997 899999999999999999999999999764 6789999999999999999999997 6899999999
Q ss_pred HHH---------hHhcHHHHHHHHH--HHHHHHHHHHHcCcHHHHHHHHHHHhhcCC-C-CCCCccchhHHHH
Q 008477 246 KIC---------KVCKCESLQRIIE--KELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PEEDRLPAALSRI 305 (564)
Q Consensus 246 ~~a---------~~c~~~~L~~~l~--~~l~~~~~a~~~~~~~L~~~~~~~i~~~~~-v-~~~~~l~~~l~~~ 305 (564)
.+| +.| +++|.+.++ ||++++.++..+.+..|.+.|.+|+.+||. | ..++|+......+
T Consensus 101 ~aA~~lqi~~l~~~C-~~~l~~~l~~~NCl~i~~~~~~~~~~~L~~~a~~~i~~~f~~v~~~~ef~~L~~~~l 172 (557)
T PHA02713 101 KCADYLLIDDLVTDC-ESYIKDYTNHDTCIYMYHRLYEMSHIPIVKYIKRMLMSNIPTLITTDAFKKTVFEIL 172 (557)
T ss_pred HHHHHHCHHHHHHHH-HHHHHhhCCccchHHHHHHHHhccchHHHHHHHHHHHHHHHHHhCChhhhhCCHHHH
Confidence 999 566 778877766 899999989999999999999999999999 6 7888877655544
No 13
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.75 E-value=4.7e-18 Score=157.02 Aligned_cols=257 Identities=19% Similarity=0.224 Sum_probs=165.7
Q ss_pred CCCeEEEecCeeechhhHhhcccChhHHHhccccccccc--cceEEcCCCCHHHHHHHhhhHccCCccCC---cccHHHH
Q 008477 170 PPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRN--EIRFSREKLSYPALYGLIHFFYSDRLEIA---VDDMEDL 244 (564)
Q Consensus 170 ~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~--~~~i~l~~v~~~~~~~lL~ylYtg~~~i~---~~~~~~l 244 (564)
-.|+-+.....-|++||++|++|||+|+-+.+..-.... -..+..-+++.++|+++|+|+|||+.... ..|+.-+
T Consensus 130 c~dldiiFkeTcfpahRA~laaRCpffK~l~nsd~e~~ae~i~dik~ag~dm~~feafLh~l~tgEfgmEd~~fqn~diL 209 (401)
T KOG2838|consen 130 CGDLDIIFKETCFPAHRAFLAARCPFFKILANSDEEPEAEDICDIKFAGFDMDAFEAFLHSLITGEFGMEDLGFQNSDIL 209 (401)
T ss_pred eccceeeeeeccchHHHHHHHhhCcchhhhccCCCCcchhhhhhhhhhccChHHHHHHHHHHHhcccchhhcCCchHHHH
Confidence 358888888899999999999999999988865422222 22344457889999999999999997432 2222222
Q ss_pred HHHHhHhcHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHhhcCCCCCCCccchhHHHHHHHHhhhccCCCCcccccc
Q 008477 245 VKICKVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARSNMDHNIDNGIC 324 (564)
Q Consensus 245 l~~a~~c~~~~L~~~l~~~l~~~~~a~~~~~~~L~~~~~~~i~~~~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 324 (564)
.+++ +.+||..- |..|+..++.........- ..+...
T Consensus 210 ~QL~----------------------edFG~~kk-------------------Ld~Dmkglfd~~c~~d~li--~~ssD~ 246 (401)
T KOG2838|consen 210 EQLC----------------------EDFGCFKK-------------------LDEDMKGLFDQDCKHDDLI--IESSDG 246 (401)
T ss_pred HHHH----------------------HhhCCchh-------------------hhHHHHHHHHhhcccCcEE--EEeccc
Confidence 2222 22233211 1123333321100000000 000000
Q ss_pred cccchhhhhcccccCCCCccEEEEeCCeEEecchhhhhcccHHHHHHhcCCccccccCCCCC--CCCCCcEEcCC-CCHH
Q 008477 325 KLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLP--GDILPCIEEHD-LSKE 401 (564)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~--~~~~~~i~l~~-v~~~ 401 (564)
++... ....+. +.+.+++|||+|.++||++||+++.. ...|+.++.. -..+++|.+.+ |-|.
T Consensus 247 elvea-------fggeeN------c~deeikahkai~aaRS~ffRnLL~R--kiregeE~sdrtlr~PkRIifdE~I~Pk 311 (401)
T KOG2838|consen 247 ELVEA-------FGGEEN------CEDEEIKAHKAIAAARSKFFRNLLLR--KIREGEEGSDRTLRRPKRIIFDELIFPK 311 (401)
T ss_pred hhhhh-------cCCccc------chhHHHHHHHHHHHhhhHHHHHHHHH--HhhcccccccccccCCceeechhhhcch
Confidence 00000 000111 12467999999999999999999975 6666655443 34567787774 4455
Q ss_pred HHH-HHhHhhccCCCCCCCCcccccCccchh---hhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccc
Q 008477 402 TFE-KMIEYMYTDGLKDIDPDQVCCNSVTWL---VALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEM 477 (564)
Q Consensus 402 ~~~-~~l~~iYt~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~ 477 (564)
.|. .+|.++||+.+ +++....|.++++.+ -++.+.+.......+.+++|+.+|-+|.++-|.+.|+..+.+.+
T Consensus 312 afA~i~lhclYTD~l-DlSl~hkce~SigSLSeakAitnaGkpn~~qaaeAleL~~IAlFfEfemLaQa~e~Vir~ac-- 388 (401)
T KOG2838|consen 312 AFAPIFLHCLYTDRL-DLSLAHKCEDSIGSLSEAKAITNAGKPNDLQAAEALELIEIALFFEFEMLAQACEDVIRKAC-- 388 (401)
T ss_pred hhhhhhhhhheeccc-chhhcccCCcccccHHHHHHHHcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--
Confidence 555 56999999999 787776787765544 56777777777788899999999999999999999999999987
Q ss_pred cChHHHHHHHH
Q 008477 478 VSPAELCHWLI 488 (564)
Q Consensus 478 ~~~~n~~~~l~ 488 (564)
..+++..+|.
T Consensus 389 -aadlsn~cLl 398 (401)
T KOG2838|consen 389 -AADLSNGCLL 398 (401)
T ss_pred -hhhccccccc
Confidence 6666655443
No 14
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.73 E-value=4.4e-18 Score=150.32 Aligned_cols=182 Identities=20% Similarity=0.245 Sum_probs=139.1
Q ss_pred hhhhcccccCCCCccEEEEeC---CeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHH
Q 008477 330 VEAMHISDHVDDLADVCVRVD---KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKM 406 (564)
Q Consensus 330 ~~~~~~~~~~~~~~Dv~~~~~---~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~ 406 (564)
+.....+...+.|||++|.++ ++.++|||.+|+|||++++-.=.+ ........+.++.+++|..+
T Consensus 54 LaitadL~Ek~qfSDlk~K~~gns~k~i~AHKfVLAARsD~WkfaN~~------------dekse~~~~dDad~Ea~~t~ 121 (280)
T KOG4591|consen 54 LAITADLLEKEQFSDLKFKFAGNSDKHIPAHKFVLAARSDFWKFANGG------------DEKSEELDLDDADFEAFHTA 121 (280)
T ss_pred HHHHHHHhhcccccceeEEecCCccccCchhhhhhhhhcchhhhccCC------------CcchhhhcccccCHHHHHHh
Confidence 333444666789999999997 578999999999999988622221 11234677889999999999
Q ss_pred hHhhccCCCCCCCCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHH
Q 008477 407 IEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHW 486 (564)
Q Consensus 407 l~~iYt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~ 486 (564)
++||||+++ ++..+ .+++.+|+.+|+.|+++-|+..|+.-+-..+ .++||+.+
T Consensus 122 iRWIYTDEi-dfk~d-----------------------D~~L~el~e~An~FqLe~Lke~C~k~l~a~l---~V~NCIk~ 174 (280)
T KOG4591|consen 122 IRWIYTDEI-DFKED-----------------------DEFLLELCELANRFQLELLKERCEKGLGALL---HVDNCIKF 174 (280)
T ss_pred heeeecccc-ccccc-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh---hHhhHHHH
Confidence 999999999 66655 4599999999999999999999999999888 99999999
Q ss_pred HHHHHhhcch----hhcchh----------hHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 008477 487 LILSDMYAAI----VCSSLS----------ILLVFLFSIFYGVLKQICLTLGKLLINLWVVDHIFLRLLSPTSQNPSS 550 (564)
Q Consensus 487 l~~A~~~~~~----~c~~l~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (564)
+++|+..++. +|-+++ ++..+...-.|......-...+...++.-..|..|+-+...+++.|..
T Consensus 175 Ye~AEe~n~~qL~n~~~eiIA~~W~dL~~a~FaqMs~aLLYklId~kTe~~LHk~iki~REDVl~LYfie~dakiP~~ 252 (280)
T KOG4591|consen 175 YEFAEELNARQLMNVAAEIIAGAWDDLGKADFAQMSAALLYKLIDGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGI 252 (280)
T ss_pred HHHHHHhhHHHHHHHHHHHHHhhccccChHHHHhccHHHHHHHHcCCCcchhHHhhhccccceeeehhhhcccccccc
Confidence 9999999965 442221 333333333344444333456667777778888888888888888753
No 15
>PHA03098 kelch-like protein; Provisional
Probab=99.73 E-value=1.4e-17 Score=181.85 Aligned_cols=135 Identities=16% Similarity=0.347 Sum_probs=118.3
Q ss_pred CCCCCCeEEEe--cCeeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHccCCccCCcccHHHH
Q 008477 167 DSFPPDVVFYV--QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDL 244 (564)
Q Consensus 167 ~~~~~Dv~~~v--~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~l 244 (564)
++.+|||++.+ +|+.|+|||.||+++|+||++||.++++ ..+|.+.+ ++++|+.+|+|+|||++.++.+++.++
T Consensus 6 ~~~~~Dv~l~~~~~~~~~~~Hk~vLaa~S~yF~~mf~~~~~---~~~i~l~~-~~~~~~~~l~y~Ytg~~~i~~~~~~~l 81 (534)
T PHA03098 6 LQKFCDESIIIVNGGGIIKVHKIILSSSSEYFKKMFKNNFK---ENEINLNI-DYDSFNEVIKYIYTGKINITSNNVKDI 81 (534)
T ss_pred cCCCCCEEEEEEcCCEEEEeHHHHHHhhhHHHHHHHhCCCC---CceEEecC-CHHHHHHHHHHhcCCceEEcHHHHHHH
Confidence 57789999998 9999999999999999999999999887 46788888 999999999999999999999999999
Q ss_pred HHHHhHhc--------HHHHHHHHH--HHHHHHHHHHHcCcHHHHHHHHHHHhhcCC-C-CCCCccchhHHHH
Q 008477 245 VKICKVCK--------CESLQRIIE--KELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PEEDRLPAALSRI 305 (564)
Q Consensus 245 l~~a~~c~--------~~~L~~~l~--~~l~~~~~a~~~~~~~L~~~~~~~i~~~~~-v-~~~~~l~~~l~~~ 305 (564)
+.+|+.++ .++|.+.++ ||+.++.+|+.+++..|.+.|.+||.+||. + ..++|+..+...+
T Consensus 82 l~~A~~l~~~~l~~~C~~~l~~~l~~~nc~~~~~~a~~~~~~~L~~~~~~~i~~nf~~v~~~~~f~~l~~~~l 154 (534)
T PHA03098 82 LSIANYLIIDFLINLCINYIIKIIDDNNCIDIYRFSFFYGCKKLYSAAYNYIRNNIELIYNDPDFIYLSKNEL 154 (534)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHhCCHhHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCchhhcCCHHHH
Confidence 99994333 566666554 899999999999999999999999999998 6 6777766554433
No 16
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....
Probab=99.71 E-value=1.2e-17 Score=142.44 Aligned_cols=105 Identities=33% Similarity=0.556 Sum_probs=88.4
Q ss_pred cccCCCCccEEEEeC-CeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCC
Q 008477 336 SDHVDDLADVCVRVD-KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDG 414 (564)
Q Consensus 336 ~~~~~~~~Dv~~~~~-~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~ 414 (564)
++.++.++|++|.++ ++.|+|||.||+++|+||+.||.+. .+.+ ....+|.++++++++|+.+++|+|+|.
T Consensus 4 ~~~~~~~~D~~i~v~d~~~~~vhk~iL~~~S~~F~~~~~~~-~~~~-------~~~~~i~~~~~~~~~~~~~l~~~Y~~~ 75 (111)
T PF00651_consen 4 LFNSNEFSDVTIRVGDGKTFYVHKNILAARSPYFRNLFEGS-KFKE-------STVPEISLPDVSPEAFEAFLEYMYTGE 75 (111)
T ss_dssp HHHHTTS--EEEEETTTEEEEE-HHHHHHHBHHHHHHHTTT-TSTT-------SSEEEEEETTSCHHHHHHHHHHHHHSE
T ss_pred HHcCCCCCCEEEEECCCEEEeechhhhhccchhhhhccccc-cccc-------ccccccccccccccccccccccccCCc
Confidence 455689999999999 8999999999999999999999971 1222 233478999999999999999999999
Q ss_pred CCCCC-CcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhh
Q 008477 415 LKDID-PDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLH 474 (564)
Q Consensus 415 ~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~ 474 (564)
+ .++ .+ ++.+++.+|++|+++.|+..|+.+|.+.
T Consensus 76 ~-~~~~~~-------------------------~~~~ll~lA~~~~~~~L~~~~~~~l~~~ 110 (111)
T PF00651_consen 76 I-EINSDE-------------------------NVEELLELADKLQIPELKKACEKFLQES 110 (111)
T ss_dssp E-EEE-TT-------------------------THHHHHHHHHHTTBHHHHHHHHHHHHHH
T ss_pred c-cCCHHH-------------------------HHHHHHHHHHHhCcHHHHHHHHHHHHhC
Confidence 9 566 66 8999999999999999999999999764
No 17
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.70 E-value=4e-17 Score=168.72 Aligned_cols=128 Identities=20% Similarity=0.200 Sum_probs=116.9
Q ss_pred hHHhhcC--CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccC-CCCCcHHHHHHHcCCHHHHHH
Q 008477 8 TIDAELD--EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARM 84 (564)
Q Consensus 8 ~l~~~~~--g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d-~~g~TpL~~A~~~g~~~~v~~ 84 (564)
++...++ |.+++..|.+|.|+| ||||.+++++++++|+++|+++|..+ .-|.||||||+.+|++.+|.+
T Consensus 59 ~v~~lve~~g~~v~~~D~~g~tlL--------HWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~l 130 (600)
T KOG0509|consen 59 TVKELVESEGESVNNPDREGVTLL--------HWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDL 130 (600)
T ss_pred HHHHHHhhcCcCCCCCCcCCccce--------eHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHH
Confidence 3344444 789999999999999 99999999999999999999999998 789999999999999999999
Q ss_pred HHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccch
Q 008477 85 LLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQF 145 (564)
Q Consensus 85 Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~ 145 (564)
|+++|||++..|.+|.+ +|.|+. +.-++.+|+.++++++..+ .+|.||||.|+-.++..
T Consensus 131 LlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D--~~grTpLmwAaykg~~~ 192 (600)
T KOG0509|consen 131 LLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRD--NNGRTPLMWAAYKGFAL 192 (600)
T ss_pred HHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcC--CCCCCHHHHHHHhcccH
Confidence 99999999999999997 899999 8888999999999999977 89999999999888754
No 18
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.68 E-value=1.6e-16 Score=164.33 Aligned_cols=132 Identities=20% Similarity=0.175 Sum_probs=116.7
Q ss_pred CchhhHHhhcC-CCCCCCCC-CCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHH
Q 008477 4 NRQSTIDAELD-EIDLDASD-FSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDA 81 (564)
Q Consensus 4 ~~~~~l~~~~~-g~~v~~~d-~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~ 81 (564)
|+-+.....+. |+++|... .-|.||| |||+++|++.+|..|+++|||++.+|..|.||||+|+..|+.-.
T Consensus 89 Nrl~v~r~li~~gadvn~~gG~l~stPL--------HWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~ 160 (600)
T KOG0509|consen 89 NRLDVARYLISHGADVNAIGGVLGSTPL--------HWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTAL 160 (600)
T ss_pred CcHHHHHHHHHcCCCccccCCCCCCCcc--------hHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHH
Confidence 34455666665 99999988 7889999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 82 ARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 82 v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
+-||+.+|+|++.+|.+|+| +|+||. ....+..|+..|+.....+ ...|+||||.|+.+++.
T Consensus 161 vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d-~~~g~TpLHwa~~~gN~ 225 (600)
T KOG0509|consen 161 VAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTD-DNHGNTPLHWAVVGGNL 225 (600)
T ss_pred HHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccc-cccCCchHHHHHhcCCc
Confidence 99999999999999999998 799988 4444888999998887644 26799999999988773
No 19
>PHA02791 ankyrin-like protein; Provisional
Probab=99.66 E-value=1.5e-15 Score=150.19 Aligned_cols=155 Identities=18% Similarity=0.091 Sum_probs=113.4
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCC
Q 008477 19 DASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFD 98 (564)
Q Consensus 19 ~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~ 98 (564)
+.+|..|.||| |+|+..|+.++++.|++.|++++..+ |+||||+|+..|+.+++++|+++|++++.+|..
T Consensus 24 ~~~D~~G~TpL--------h~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~ 93 (284)
T PHA02791 24 FKADVHGHSAL--------YYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDK 93 (284)
T ss_pred CCCCCCCCcHH--------HHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Confidence 56788899999 88998899888888888888887764 688999998888888998888888888888888
Q ss_pred CCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccc-cccchhccccccchhhhhHHhhcccccccCCCCCCCCCCCCeE
Q 008477 99 GDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAA-LRDTFLGCGANRQFLEEAEVVLGISGVTSNGASNSDSFPPDVV 174 (564)
Q Consensus 99 g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g-~t~lh~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~Dv~ 174 (564)
|.| +|+|+. +.+++++|+.+|++.+..+ ..| .||+|.|+..++....+... ..+... .|.
T Consensus 94 G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~--~~g~~TpL~~Aa~~g~~eivk~LL--------~~~~~~-----~d~- 157 (284)
T PHA02791 94 GNTALYYAVDSGNMQTVKLFVKKNWRLMFYG--KTGWKTSFYHAVMLNDVSIVSYFL--------SEIPST-----FDL- 157 (284)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCcCccC--CCCCcHHHHHHHHcCCHHHHHHHH--------hcCCcc-----ccc-
Confidence 887 788877 7888888888888877655 555 47888888877743322211 111110 011
Q ss_pred EEecCeeechhhHhhcccChhHHHhccc
Q 008477 175 FYVQGRPIEAHRVILSARSVFFRRKFET 202 (564)
Q Consensus 175 ~~v~~~~~~~Hk~iL~a~S~~f~~l~~~ 202 (564)
....-+.|.++...+-+..+-++..
T Consensus 158 ---~~g~TpLh~Aa~~g~~eiv~lLL~~ 182 (284)
T PHA02791 158 ---AILLSCIHITIKNGHVDMMILLLDY 182 (284)
T ss_pred ---ccCccHHHHHHHcCCHHHHHHHHHC
Confidence 1134577877777777777666653
No 20
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.65 E-value=8.6e-16 Score=146.25 Aligned_cols=110 Identities=19% Similarity=0.223 Sum_probs=64.8
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHhcC--CHHHHHHHHHcCCCccccC-CCCCcHHHHHHHc---CCHHHHHHHHhCCCC
Q 008477 18 LDASDFSSSVPLKKVPNGDVFEASRAG--DVDRLRYILESGVNVNARD-QWDSVALYYACLA---GHLDAARMLLESGAI 91 (564)
Q Consensus 18 v~~~d~~g~tpL~~~~~~~l~~Aa~~g--~~~~v~~Ll~~g~~~n~~d-~~g~TpL~~A~~~---g~~~~v~~Ll~~ga~ 91 (564)
+|..|..|.||| |+|+..+ +.+++++|+++|+++|.++ ..|+||||+|+.. ++.+++++|+++|++
T Consensus 44 ~n~~~~~g~TpL--------h~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gad 115 (209)
T PHA02859 44 VNDCNDLYETPI--------FSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSS 115 (209)
T ss_pred hhccCccCCCHH--------HHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCC
Confidence 345556666666 6666533 5666666666666666664 3566666665542 356666666666666
Q ss_pred CCCccCCCCc-hHHHHc----hHHHHHHHHhccCCCCCCCccccccccchh
Q 008477 92 CSEHTFDGDR-CHYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFL 137 (564)
Q Consensus 92 ~~~~d~~g~t-l~~aa~----~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~ 137 (564)
++..|..|.| +|.|+. +.+++++|+++|++++..+ ..|.||+|.
T Consensus 116 in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d--~~g~t~Lh~ 164 (209)
T PHA02859 116 ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKD--FDNNNILYS 164 (209)
T ss_pred CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccc--CCCCcHHHH
Confidence 6666666665 454432 3556666666666665544 556666664
No 21
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.64 E-value=8e-16 Score=165.56 Aligned_cols=124 Identities=20% Similarity=0.156 Sum_probs=112.4
Q ss_pred hHHhhcC-CCCCCCCCCC-CCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q 008477 8 TIDAELD-EIDLDASDFS-SSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (564)
Q Consensus 8 ~l~~~~~-g~~v~~~d~~-g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~L 85 (564)
.+...++ |+++|.++.. |.||| |+|+..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpL--------h~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~L 220 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTAL--------HYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHIL 220 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHH--------HHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHH
Confidence 4444555 9999999999 99999 999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCccCCCCc-hHHHHc---hHHHHHHHHhccCCCCCCCccccccccchhccc
Q 008477 86 LESGAICSEHTFDGDR-CHYAAL---NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (564)
Q Consensus 86 l~~ga~~~~~d~~g~t-l~~aa~---~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~ 140 (564)
+++|++++.+|..|.| +|+|+. +.+++++|+++|++++..+. ..|.||||.|+.
T Consensus 221 l~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~-~~g~TpLh~A~~ 278 (477)
T PHA02878 221 LENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSY-ILGLTALHSSIK 278 (477)
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCC-CCCCCHHHHHcc
Confidence 9999999999999998 788885 67999999999999987551 269999999943
No 22
>PHA02946 ankyin-like protein; Provisional
Probab=99.64 E-value=1.2e-15 Score=161.62 Aligned_cols=127 Identities=17% Similarity=0.169 Sum_probs=112.5
Q ss_pred hHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcC--CHHHHHH
Q 008477 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAG--HLDAARM 84 (564)
Q Consensus 8 ~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g--~~~~v~~ 84 (564)
++...++ |+++|.+|..|+||| |+|+..|+.++++.|+++|+++|.+|..|+||||+|+..+ ..+++++
T Consensus 54 iv~~Ll~~Gadvn~~d~~G~TpL--------h~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~l 125 (446)
T PHA02946 54 FVEELLHRGYSPNETDDDGNYPL--------HIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINL 125 (446)
T ss_pred HHHHHHHCcCCCCccCCCCCCHH--------HHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHH
Confidence 4555555 999999999999999 9999999999999999999999999999999999998866 4889999
Q ss_pred HHhCCCCCCC-ccCCCCchHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 85 LLESGAICSE-HTFDGDRCHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 85 Ll~~ga~~~~-~d~~g~tl~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
|+++|++++. .|..|.|++.+|. +.+++++|+..|++++..+ ..|.||||.|+..++.
T Consensus 126 Ll~~Gadin~~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d--~~G~t~Lh~A~~~~~~ 186 (446)
T PHA02946 126 LVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARIVD--KFGKNHIHRHLMSDNP 186 (446)
T ss_pred HHHcCCCcccccCCCCCcHHHHHHCCChHHHHHHHhccccccccC--CCCCCHHHHHHHhcCC
Confidence 9999999995 6888988555655 8899999999999998877 8899999999876654
No 23
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.64 E-value=5.6e-16 Score=134.53 Aligned_cols=125 Identities=22% Similarity=0.181 Sum_probs=96.6
Q ss_pred hhHHhhcC--CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q 008477 7 STIDAELD--EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARM 84 (564)
Q Consensus 7 ~~l~~~~~--g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~ 84 (564)
.++...+. .--||.+|.+|.||| |.|+.+||+++++.|+..|++++.+...||||||-||..++.+|+.+
T Consensus 77 ~eV~~lL~e~an~vNtrD~D~YTpL--------HRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~ 148 (228)
T KOG0512|consen 77 TEVQRLLSEKANHVNTRDEDEYTPL--------HRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGR 148 (228)
T ss_pred HHHHHHHHhccccccccccccccHH--------HHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHH
Confidence 34444444 344889999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCccCCCCc-hHHHHc---hHHHHHH-HHhccCCCCCCCccccccccchhcccc
Q 008477 85 LLESGAICSEHTFDGDR-CHYAAL---NLKVRKL-LKAYEARPPPLGPLQAALRDTFLGCGA 141 (564)
Q Consensus 85 Ll~~ga~~~~~d~~g~t-l~~aa~---~~~i~~l-Ll~~~~~~~~~~~~~~g~t~lh~A~~~ 141 (564)
||++|+|+|+......| +|.+|. ....+.+ |...+.++...+ ..+.||+.+|-+-
T Consensus 149 LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~n--n~eeta~~iARRT 208 (228)
T KOG0512|consen 149 LLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKN--NLEETAFDIARRT 208 (228)
T ss_pred HHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhc--CccchHHHHHHHh
Confidence 99999999988776666 787777 2333444 345566666655 6678888777654
No 24
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.64 E-value=1.1e-15 Score=162.44 Aligned_cols=128 Identities=24% Similarity=0.280 Sum_probs=117.5
Q ss_pred hhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q 008477 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (564)
Q Consensus 7 ~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~L 85 (564)
..+...++ |++++.+|..|.||| |+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 105 ~~i~~ll~~g~d~n~~~~~g~T~L--------h~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~L 176 (434)
T PHA02874 105 DMIKTILDCGIDVNIKDAELKTFL--------HYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLL 176 (434)
T ss_pred HHHHHHHHCcCCCCCCCCCCccHH--------HHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHH
Confidence 34455555 899999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 86 LESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 86 l~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
+++|++++..+..|.| +|+|+. +.+++++|+++|+++...+ ..|.||||.|+..++.
T Consensus 177 l~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~--~~g~TpL~~A~~~~~~ 236 (434)
T PHA02874 177 LEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKC--KNGFTPLHNAIIHNRS 236 (434)
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCC--CCCCCHHHHHHHCChH
Confidence 9999999999999998 788888 8999999999999988766 7899999999987664
No 25
>PHA02791 ankyrin-like protein; Provisional
Probab=99.63 E-value=1.7e-15 Score=149.80 Aligned_cols=171 Identities=15% Similarity=0.157 Sum_probs=125.1
Q ss_pred hhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q 008477 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (564)
Q Consensus 7 ~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~L 85 (564)
..+.-.++ |++++..+ |.||| |+|+..|+.++++.|+..|++++.+|..|+||||+|+..|+.+++++|
T Consensus 44 eiv~~Ll~~ga~~n~~d--~~TpL--------h~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~L 113 (284)
T PHA02791 44 RLVCTLLNAGALKNLLE--NEFPL--------HQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLF 113 (284)
T ss_pred HHHHHHHHCcCCCcCCC--CCCHH--------HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 44445555 88888764 68999 999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCccCCCC-c-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccchhhhhHHhhcccccccC
Q 008477 86 LESGAICSEHTFDGD-R-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTSN 161 (564)
Q Consensus 86 l~~ga~~~~~d~~g~-t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~l~~~~~~~~~~~l~~~ 161 (564)
+++|++++.++..|. | +|+|+. +.+++++|+.++.+.. + ...|.||||+|+..++....+.-... -.+....
T Consensus 114 l~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~--d-~~~g~TpLh~Aa~~g~~eiv~lLL~~-gAd~n~~ 189 (284)
T PHA02791 114 VKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--D-LAILLSCIHITIKNGHVDMMILLLDY-MTSTNTN 189 (284)
T ss_pred HHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc--c-cccCccHHHHHHHcCCHHHHHHHHHC-CCCCCcc
Confidence 999999999888885 5 787877 8899999999865432 1 12479999999999985333332221 1111111
Q ss_pred CCCCCCCCCCCeEEEecCeeechhhHhhcccCh
Q 008477 162 GASNSDSFPPDVVFYVQGRPIEAHRVILSARSV 194 (564)
Q Consensus 162 ~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~ 194 (564)
. ..+..+++...+......+-+.+|.....
T Consensus 190 d---~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~ 219 (284)
T PHA02791 190 N---SLLFIPDIKLAIDNKDLEMLQALFKYDIN 219 (284)
T ss_pred c---CCCCChHHHHHHHcCCHHHHHHHHHCCCC
Confidence 1 11222345555666666666666655433
No 26
>PHA02741 hypothetical protein; Provisional
Probab=99.63 E-value=1.8e-15 Score=139.27 Aligned_cols=118 Identities=17% Similarity=0.126 Sum_probs=105.0
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHH------cCCCccccCCCCCcHHHHHHHcCC----HHHHHHHHh
Q 008477 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILE------SGVNVNARDQWDSVALYYACLAGH----LDAARMLLE 87 (564)
Q Consensus 18 v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~------~g~~~n~~d~~g~TpL~~A~~~g~----~~~v~~Ll~ 87 (564)
++.+|..|.||| |+|+..|+.++++.|+. .|++++.+|..|+||||+|+..|+ .+++++|++
T Consensus 14 ~~~~~~~g~t~L--------h~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~ 85 (169)
T PHA02741 14 IAEKNSEGENFF--------HEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIE 85 (169)
T ss_pred hhccccCCCCHH--------HHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHH
Confidence 567889999999 99999999999998854 368899999999999999999999 589999999
Q ss_pred CCCCCCCccC-CCCc-hHHHHc--hHHHHHHHHh-ccCCCCCCCccccccccchhccccccch
Q 008477 88 SGAICSEHTF-DGDR-CHYAAL--NLKVRKLLKA-YEARPPPLGPLQAALRDTFLGCGANRQF 145 (564)
Q Consensus 88 ~ga~~~~~d~-~g~t-l~~aa~--~~~i~~lLl~-~~~~~~~~~~~~~g~t~lh~A~~~~~~~ 145 (564)
.|++++.++. .|.| +|+|+. +.+++++|+. .|++++..+ ..|.||+|+|+..++..
T Consensus 86 ~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n--~~g~tpL~~A~~~~~~~ 146 (169)
T PHA02741 86 LGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCN--ADNKSPFELAIDNEDVA 146 (169)
T ss_pred cCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCC--CCCCCHHHHHHHCCCHH
Confidence 9999999885 8887 788888 8899999997 588888877 78999999999988743
No 27
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.62 E-value=2.3e-15 Score=149.00 Aligned_cols=119 Identities=18% Similarity=0.139 Sum_probs=104.6
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccC----CCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 008477 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD----QWDSVALYYACLAGHLDAARMLLESGAICS 93 (564)
Q Consensus 18 v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d----~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 93 (564)
+-.+|..|+||+ ||.|+..|+.++++.|+++|+++|.++ ..|.||||+|+..|+.+++++|+++||+++
T Consensus 25 ~~~~d~~~~~~l-------L~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN 97 (300)
T PHA02884 25 IKKKNKICIANI-------LYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVN 97 (300)
T ss_pred hhccCcCCCCHH-------HHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcC
Confidence 446788998877 477788899999999999999999874 589999999999999999999999999999
Q ss_pred Cc-cCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccch
Q 008477 94 EH-TFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQF 145 (564)
Q Consensus 94 ~~-d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~ 145 (564)
.. +..|.| +|.|+. +.+++++|+.+|++++..+ ..|.||+|.|++.++..
T Consensus 98 ~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd--~~G~TpL~~A~~~~~~~ 151 (300)
T PHA02884 98 RYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQT--NDMVTPIELALMICNNF 151 (300)
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC--CCCCCHHHHHHHhCChh
Confidence 86 457877 788876 8999999999999999877 78999999998866643
No 28
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.62 E-value=2.9e-15 Score=161.54 Aligned_cols=173 Identities=18% Similarity=0.185 Sum_probs=129.7
Q ss_pred hhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHH--hcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcC--CHH
Q 008477 6 QSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEAS--RAGDVDRLRYILESGVNVNARDQWDSVALYYACLAG--HLD 80 (564)
Q Consensus 6 ~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa--~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g--~~~ 80 (564)
...+...++ |++++..|..|.||| |+|+ ..|+.++++.|+++|++++..+..|.||||+|+..| +.+
T Consensus 86 ~~iv~~Ll~~ga~i~~~d~~g~tpL--------~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 157 (480)
T PHA03100 86 KEIVKLLLEYGANVNAPDNNGITPL--------LYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLK 157 (480)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCchh--------hHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHH
Confidence 345555565 899999999999999 9999 899999999999999999999999999999999999 899
Q ss_pred HHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccc------cccchhccccccchhhhhHH
Q 008477 81 AARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAA------LRDTFLGCGANRQFLEEAEV 151 (564)
Q Consensus 81 ~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g------~t~lh~A~~~~~~~l~~~~~ 151 (564)
++++|+++|++++..+..|.| +|+|+. +.+++++|+++|++++..+ ..| .||+|.|+..++...+-..+
T Consensus 158 iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~--~~~~~~~~~~t~l~~a~~~~~~~~~iv~~ 235 (480)
T PHA03100 158 ILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGD--IETLLFTIFETPLHIAACYNEITLEVVNY 235 (480)
T ss_pred HHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCC--CCCCcHHHHHhHHHHHHHhCcCcHHHHHH
Confidence 999999999999988888887 777777 7889999999998887755 556 78899998877722222222
Q ss_pred hhcccccccCCCCCCCCCCCCeEEEecCeeechhhHhhcccChhHHHhccc
Q 008477 152 VLGISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFET 202 (564)
Q Consensus 152 ~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~l~~~ 202 (564)
. +..+ .|+-..-..+.-+.|.++....-..++-++..
T Consensus 236 L------l~~g--------~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ 272 (480)
T PHA03100 236 L------LSYG--------VPINIKDVYGFTPLHYAVYNNNPEFVKYLLDL 272 (480)
T ss_pred H------HHcC--------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 1 1111 12222222344577777776666667766653
No 29
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.62 E-value=5.7e-16 Score=153.76 Aligned_cols=124 Identities=23% Similarity=0.387 Sum_probs=105.1
Q ss_pred HhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 008477 10 DAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES 88 (564)
Q Consensus 10 ~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ 88 (564)
...+. |++||..+....||| .-||..||++++|+|+++|+|++..|..|.|.||+||..||.+++++|++.
T Consensus 101 k~L~~~ga~VN~tT~TNStPL--------raACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~ 172 (615)
T KOG0508|consen 101 KLLLRRGASVNDTTRTNSTPL--------RAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQ 172 (615)
T ss_pred HHHHHhcCccccccccCCccH--------HHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHh
Confidence 33444 888888888888899 888999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 89 GAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 89 ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
|||+|.++..|+| +|.++. +.+++++|+++|+...... .|.|||..|...++.
T Consensus 173 gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~---~GmtPL~~Aa~tG~~ 228 (615)
T KOG0508|consen 173 GADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDG---HGMTPLLLAAVTGHT 228 (615)
T ss_pred CCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeeecC---CCCchHHHHhhhcch
Confidence 9999999988888 788887 8888999999888776533 588999888887775
No 30
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.62 E-value=7.5e-16 Score=149.95 Aligned_cols=131 Identities=22% Similarity=0.301 Sum_probs=109.8
Q ss_pred CCCCeEEEecCeeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHccCCccCC---cccHHHHH
Q 008477 169 FPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIA---VDDMEDLV 245 (564)
Q Consensus 169 ~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~---~~~~~~ll 245 (564)
..+||+|++++++|+|||+|||+||.||++|+.++|.|+.+..|++.+-..++|+.+|+|+|||.++++ .+...+.+
T Consensus 43 ~y~DVtfvve~~rfpAHRvILAaRs~yFRAlLYgGm~Es~q~~ipLq~t~~eAF~~lLrYiYtg~~~l~~~~ed~lld~L 122 (620)
T KOG4350|consen 43 DYSDVTFVVEDTRFPAHRVILAARSSYFRALLYGGMQESHQQLIPLQETNSEAFRALLRYIYTGKIDLAGVEEDILLDYL 122 (620)
T ss_pred cccceEEEEeccccchhhhhHHHHHHHHHHHHhhhhhhhhhcccccccccHHHHHHHHHHHhhcceecccchHHHHHHHH
Confidence 345999999999999999999999999999999999999999999998889999999999999998764 45567777
Q ss_pred HHHhHhc--------HHHHHHHHH--HHHHHHHHHHHcCcHHHHHHHHHHHhhcCC-C-CCCCccc
Q 008477 246 KICKVCK--------CESLQRIIE--KELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PEEDRLP 299 (564)
Q Consensus 246 ~~a~~c~--------~~~L~~~l~--~~l~~~~~a~~~~~~~L~~~~~~~i~~~~~-v-~~~~~l~ 299 (564)
.+|..++ .+++.+.+. |...++..|..|+.++|...|..|..+|-. + ..+.|..
T Consensus 123 slAh~Ygf~~Le~aiSeYl~~iL~~~NvCmifdaA~ly~l~~Lt~~C~mfmDrnA~~lL~~~sFn~ 188 (620)
T KOG4350|consen 123 SLAHRYGFIQLETAISEYLKEILKNENVCMIFDAAYLYQLTDLTDYCMMFMDRNADQLLEDPSFNR 188 (620)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHcccceeeeeeHHHHhcchHHHHHHHHHHhcCHHhhhcCcchhh
Confidence 8885554 344555444 566788899999999999999999988876 4 4455543
No 31
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.61 E-value=2.3e-15 Score=162.03 Aligned_cols=126 Identities=21% Similarity=0.233 Sum_probs=114.1
Q ss_pred hhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHc-CCHHHHHH
Q 008477 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLA-GHLDAARM 84 (564)
Q Consensus 7 ~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~-g~~~~v~~ 84 (564)
..+.-.++ |+++|..|..|.||| |+|+..|+.++++.|++.|++++.+|..|+||||+|+.. ++.+++++
T Consensus 182 ~iv~~Ll~~gad~n~~d~~g~tpL--------h~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~ 253 (477)
T PHA02878 182 RLTELLLSYGANVNIPDKTNNSPL--------HHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKL 253 (477)
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHH--------HHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHH
Confidence 44455555 999999999999999 999999999999999999999999999999999999975 79999999
Q ss_pred HHhCCCCCCCccC-CCCc-hHHHHchHHHHHHHHhccCCCCCCCccccccccchhccccc
Q 008477 85 LLESGAICSEHTF-DGDR-CHYAALNLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (564)
Q Consensus 85 Ll~~ga~~~~~d~-~g~t-l~~aa~~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~ 142 (564)
|+++|++++..+. .|.| +|.|+.+.+++++|+++|++++..+ ..|.||+|.|+..+
T Consensus 254 Ll~~gadvn~~~~~~g~TpLh~A~~~~~~v~~Ll~~gadin~~d--~~g~TpL~~A~~~~ 311 (477)
T PHA02878 254 LLEHGVDVNAKSYILGLTALHSSIKSERKLKLLLEYGADINSLN--SYKLTPLSSAVKQY 311 (477)
T ss_pred HHHcCCCCCccCCCCCCCHHHHHccCHHHHHHHHHCCCCCCCcC--CCCCCHHHHHHHHc
Confidence 9999999999886 6887 7888668999999999999999977 89999999998743
No 32
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.60 E-value=1.2e-15 Score=137.43 Aligned_cols=136 Identities=18% Similarity=0.190 Sum_probs=119.3
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (564)
...+|..|+.|.||| +||+.+|++++|++|++.|++++...+...|+|.+|+..|..++|++||.++.|+|.
T Consensus 150 ~n~VN~~De~GfTpL--------iWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNv 221 (296)
T KOG0502|consen 150 NNKVNACDEFGFTPL--------IWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNV 221 (296)
T ss_pred hccccCccccCchHh--------HHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce
Confidence 466899999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccchhhhhHHhhcccccccC
Q 008477 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTSN 161 (564)
Q Consensus 95 ~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~l~~~~~~~~~~~l~~~ 161 (564)
.|.+|-| +.+|+. +.++++.|+..|++++..+ ..|++++-+|++-+.. ..++....|+-.++.+
T Consensus 222 yDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~--dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~ 288 (296)
T KOG0502|consen 222 YDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQED--DSGYWIMDLAVALGYR-IVQQVIEKHALKLCQD 288 (296)
T ss_pred eccCCCceeeeeecCChHHHHHHHHhcCCCccccc--ccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhc
Confidence 9999987 788888 8999999999999999866 8899999999987765 3333333444444433
No 33
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.59 E-value=3.8e-15 Score=163.30 Aligned_cols=85 Identities=20% Similarity=0.235 Sum_probs=47.0
Q ss_pred HHhhcC-C-CCCCCC-CCCCCCCCCCCCChhHHHHHh--cCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCC--HHH
Q 008477 9 IDAELD-E-IDLDAS-DFSSSVPLKKVPNGDVFEASR--AGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH--LDA 81 (564)
Q Consensus 9 l~~~~~-g-~~v~~~-d~~g~tpL~~~~~~~l~~Aa~--~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~--~~~ 81 (564)
+...++ | +++|.+ |..|.||| |+|+. .++.+++++|+++|+++|.+|..|+||||+|+..|+ .++
T Consensus 158 Vk~LLe~G~ADIN~~~d~~G~TpL--------H~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eI 229 (764)
T PHA02716 158 IKYMVDVGIVNLNYVCKKTGYGIL--------HAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASV 229 (764)
T ss_pred HHHHHHCCCCCcccccCCCCCcHH--------HHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHH
Confidence 333443 5 555555 55566666 55432 244555555555555555555556666666555553 355
Q ss_pred HHHHHhCCCCCCCccCCCCc
Q 008477 82 ARMLLESGAICSEHTFDGDR 101 (564)
Q Consensus 82 v~~Ll~~ga~~~~~d~~g~t 101 (564)
+++|+++||+++.+|..|.|
T Consensus 230 VklLLe~GADVN~kD~~G~T 249 (764)
T PHA02716 230 IKKIIELGGDMDMKCVNGMS 249 (764)
T ss_pred HHHHHHcCCCCCCCCCCCCC
Confidence 55555556665555555554
No 34
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.59 E-value=1e-14 Score=155.16 Aligned_cols=130 Identities=22% Similarity=0.241 Sum_probs=115.8
Q ss_pred chhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCC-----------------------Ccc
Q 008477 5 RQSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGV-----------------------NVN 60 (564)
Q Consensus 5 ~~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~-----------------------~~n 60 (564)
+...+...++ |+++|..+..|.||| |+|+..|+.+++++|+++|+ +++
T Consensus 47 ~~~iv~~Ll~~Ga~~n~~~~~~~t~L--------~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n 118 (434)
T PHA02874 47 DAKIVELFIKHGADINHINTKIPHPL--------LTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVN 118 (434)
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHH--------HHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCC
Confidence 3455666676 999999999999999 99999999999999987664 466
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchh
Q 008477 61 ARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFL 137 (564)
Q Consensus 61 ~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~ 137 (564)
.+|..|.||||+|+..|+.+++++|+++|++++..|..|.| +|+|+. +.+++++|+++|++++..+ ..|.||||.
T Consensus 119 ~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~--~~g~tpL~~ 196 (434)
T PHA02874 119 IKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKD--NNGESPLHN 196 (434)
T ss_pred CCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCC--CCCCCHHHH
Confidence 78889999999999999999999999999999999999998 788888 8899999999999988866 789999999
Q ss_pred ccccccc
Q 008477 138 GCGANRQ 144 (564)
Q Consensus 138 A~~~~~~ 144 (564)
|+..++.
T Consensus 197 A~~~g~~ 203 (434)
T PHA02874 197 AAEYGDY 203 (434)
T ss_pred HHHcCCH
Confidence 9998874
No 35
>PHA03095 ankyrin-like protein; Provisional
Probab=99.59 E-value=6.7e-15 Score=158.38 Aligned_cols=128 Identities=21% Similarity=0.183 Sum_probs=116.9
Q ss_pred hhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcC---CHHHHHHHHHcCCCccccCCCCCcHHHHHHHcC-CHH
Q 008477 6 QSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAG---DVDRLRYILESGVNVNARDQWDSVALYYACLAG-HLD 80 (564)
Q Consensus 6 ~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g---~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g-~~~ 80 (564)
...+...++ |+++|.++..|.||| |+|+..| +.++++.|++.|+++|.+|..|+||||+|+..| +.+
T Consensus 27 ~~~v~~Ll~~ga~vn~~~~~g~t~L--------h~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~ 98 (471)
T PHA03095 27 VEEVRRLLAAGADVNFRGEYGKTPL--------HLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLD 98 (471)
T ss_pred HHHHHHHHHcCCCcccCCCCCCCHH--------HHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHH
Confidence 355666666 999999999999999 9999998 999999999999999999999999999999999 599
Q ss_pred HHHHHHhCCCCCCCccCCCCc-hHHHHc----hHHHHHHHHhccCCCCCCCccccccccchhcccccc
Q 008477 81 AARMLLESGAICSEHTFDGDR-CHYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (564)
Q Consensus 81 ~v~~Ll~~ga~~~~~d~~g~t-l~~aa~----~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~ 143 (564)
++++|+++|++++..|..|.| +|+|+. +.+++++|+++|++++..+ ..|.||+|.|+..+.
T Consensus 99 iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d--~~g~tpL~~a~~~~~ 164 (471)
T PHA03095 99 VIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALD--LYGMTPLAVLLKSRN 164 (471)
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccC--CCCCCHHHHHHHcCC
Confidence 999999999999999999998 788883 6789999999999998877 889999999887664
No 36
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac. Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.
Probab=99.59 E-value=4e-15 Score=121.02 Aligned_cols=90 Identities=36% Similarity=0.508 Sum_probs=81.1
Q ss_pred cEEEEeCCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCCCCCCccc
Q 008477 344 DVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (564)
Q Consensus 344 Dv~~~~~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~l~~~~~ 423 (564)
|+++.++|+.+++||.+|+++|+||++||.+ +|.+. ....+.++++++++|+.+++|+|++.+ .++..
T Consensus 1 dv~i~v~~~~~~~h~~iL~~~s~~f~~~~~~--~~~~~-------~~~~i~l~~~~~~~f~~~l~~ly~~~~-~~~~~-- 68 (90)
T smart00225 1 DVTLVVGGKKFKAHKAVLAACSPYFKALFSG--DFKES-------KKSEIYLDDVSPEDFRALLEFLYTGKL-DLPEE-- 68 (90)
T ss_pred CeEEEECCEEEehHHHHHhhcCHHHHHHHcC--CCccC-------CCCEEEecCCCHHHHHHHHHeecCcee-ecCHH--
Confidence 6889999999999999999999999999987 44433 347899999999999999999999998 67766
Q ss_pred ccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHH
Q 008477 424 CCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVA 468 (564)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~ 468 (564)
.+.+++.+|++|+++.|+..|+
T Consensus 69 -----------------------~~~~l~~~a~~~~~~~l~~~c~ 90 (90)
T smart00225 69 -----------------------NVEELLELADYLQIPGLVELCE 90 (90)
T ss_pred -----------------------HHHHHHHHHHHHCcHHHHhhhC
Confidence 8999999999999999999985
No 37
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.58 E-value=1.3e-14 Score=153.50 Aligned_cols=129 Identities=20% Similarity=0.199 Sum_probs=111.8
Q ss_pred hhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q 008477 6 QSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARM 84 (564)
Q Consensus 6 ~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~ 84 (564)
...+...++ |+++|..+..|.||| |+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++
T Consensus 15 ~~iv~~Ll~~g~~~n~~~~~g~tpL--------~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~ 86 (413)
T PHA02875 15 LDIARRLLDIGINPNFEIYDGISPI--------KLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEE 86 (413)
T ss_pred HHHHHHHHHCCCCCCccCCCCCCHH--------HHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHH
Confidence 355666666 999999999999999 99999999999999999999999988889999999999999999999
Q ss_pred HHhCCCCCC-CccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 85 LLESGAICS-EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 85 Ll~~ga~~~-~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
|++.|++++ ..+..|.| +|+|+. +.+++++|+++|++++..+ ..|.||||.|+..++.
T Consensus 87 Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~--~~g~tpLh~A~~~~~~ 148 (413)
T PHA02875 87 LLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPN--TDKFSPLHLAVMMGDI 148 (413)
T ss_pred HHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCC--CCCCCHHHHHHHcCCH
Confidence 999988764 45667776 788887 7889999999999888866 7789999999987774
No 38
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.57 E-value=9.9e-15 Score=138.96 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=82.5
Q ss_pred CCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCCCCcc-CC
Q 008477 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAG--HLDAARMLLESGAICSEHT-FD 98 (564)
Q Consensus 22 d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g--~~~~v~~Ll~~ga~~~~~d-~~ 98 (564)
...++||| |+|+..|+.+.|+.|++. ++.+|..|.||||+|+..+ +.+++++|+++|++++..+ ..
T Consensus 18 ~~~~~~pL--------~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~ 86 (209)
T PHA02859 18 FYRYCNPL--------FYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDN 86 (209)
T ss_pred hhccCcHH--------HHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCC
Confidence 45667788 888888888888888864 4667778888888888754 7888888888888888776 36
Q ss_pred CCc-hHHHHc-----hHHHHHHHHhccCCCCCCCccccccccchhcccc
Q 008477 99 GDR-CHYAAL-----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (564)
Q Consensus 99 g~t-l~~aa~-----~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~ 141 (564)
|.| +|+|+. +.+++++|+++|++++..+ ..|.||||.|+..
T Consensus 87 g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d--~~G~TpLh~a~~~ 133 (209)
T PHA02859 87 NLSALHHYLSFNKNVEPEILKILIDSGSSITEED--EDGKNLLHMYMCN 133 (209)
T ss_pred CCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcC--CCCCCHHHHHHHh
Confidence 766 676654 4678888888888888766 7788888887654
No 39
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.57 E-value=5.5e-15 Score=138.13 Aligned_cols=115 Identities=24% Similarity=0.256 Sum_probs=108.3
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (564)
.-|+|..|..|.+|| ||||..||..+++.|+.+|+.+|..+....||||+|+.+||.++|+.|++..+|+|.
T Consensus 24 ehdln~gddhgfspl--------hwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna 95 (448)
T KOG0195|consen 24 EHDLNVGDDHGFSPL--------HWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA 95 (448)
T ss_pred ccccccccccCcchh--------hhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch
Confidence 467899999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhcc
Q 008477 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGC 139 (564)
Q Consensus 95 ~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~ 139 (564)
.+..|+| +||||. ...+.+-|+..|+.++..+ +.|.||+..|-
T Consensus 96 vnehgntplhyacfwgydqiaedli~~ga~v~icn--k~g~tpldkak 141 (448)
T KOG0195|consen 96 VNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICN--KKGMTPLDKAK 141 (448)
T ss_pred hhccCCCchhhhhhhcHHHHHHHHHhccceeeecc--cCCCCchhhhc
Confidence 9999997 899999 8888999999999999988 89999997653
No 40
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.57 E-value=2.3e-14 Score=151.51 Aligned_cols=170 Identities=16% Similarity=0.118 Sum_probs=132.3
Q ss_pred hhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCcc-ccCCCCCcHHHHHHHcCCHHHHHH
Q 008477 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVN-ARDQWDSVALYYACLAGHLDAARM 84 (564)
Q Consensus 7 ~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n-~~d~~g~TpL~~A~~~g~~~~v~~ 84 (564)
..+...++ |++++..+..+.||| |+|+..|+.++++.|++.|++++ ..+..|+||||+|+..|+.+++++
T Consensus 49 ~~v~~Ll~~ga~~~~~~~~~~t~L--------~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~ 120 (413)
T PHA02875 49 EAIKLLMKHGAIPDVKYPDIESEL--------HDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKL 120 (413)
T ss_pred HHHHHHHhCCCCccccCCCcccHH--------HHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHH
Confidence 44555566 899999989999999 99999999999999999998764 557789999999999999999999
Q ss_pred HHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccchhhhhHHhhcccccccC
Q 008477 85 LLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTSN 161 (564)
Q Consensus 85 Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~l~~~~~~~~~~~l~~~ 161 (564)
|+++|++++..+..|.| +|+|+. +.+++++|+++|++++..+ ..|.||||.|+..++....+. |+..
T Consensus 121 Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d--~~g~TpL~~A~~~g~~eiv~~--------Ll~~ 190 (413)
T PHA02875 121 LIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIED--CCGCTPLIIAMAKGDIAICKM--------LLDS 190 (413)
T ss_pred HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCC--CCCCCHHHHHHHcCCHHHHHH--------HHhC
Confidence 99999999999999987 788888 8999999999999988876 789999999999887432222 1111
Q ss_pred CCCCCCCCCCCeEEEe-cCeeechhhHhhcccChhHHHhccc
Q 008477 162 GASNSDSFPPDVVFYV-QGRPIEAHRVILSARSVFFRRKFET 202 (564)
Q Consensus 162 ~~~~~~~~~~Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~l~~~ 202 (564)
+ .|+...- .|...+.|-++-..+....+-++..
T Consensus 191 g--------a~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~ 224 (413)
T PHA02875 191 G--------ANIDYFGKNGCVAALCYAIENNKIDIVRLFIKR 224 (413)
T ss_pred C--------CCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHC
Confidence 1 1222222 2334456666666666666665543
No 41
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.57 E-value=1.7e-14 Score=155.53 Aligned_cols=131 Identities=23% Similarity=0.264 Sum_probs=121.1
Q ss_pred CchhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHH-----HHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHH--H
Q 008477 4 NRQSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFE-----ASRAGDVDRLRYILESGVNVNARDQWDSVALYYAC--L 75 (564)
Q Consensus 4 ~~~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~-----Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~--~ 75 (564)
.+...+...++ |++++..+..|.||| |+ |+..|+.++++.|++.|++++..|..|.||||+|+ .
T Consensus 46 ~~~~ivk~Ll~~g~~~~~~~~~~~t~L--------~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~ 117 (480)
T PHA03100 46 RNIDVVKILLDNGADINSSTKNNSTPL--------HYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKK 117 (480)
T ss_pred CCHHHHHHHHHcCCCCCCccccCcCHH--------HHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcc
Confidence 45667778887 999999999999999 99 99999999999999999999999999999999999 9
Q ss_pred cCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc----hHHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 76 AGHLDAARMLLESGAICSEHTFDGDR-CHYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 76 ~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~----~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
.|+.+++++|+++|++++..+..|.| +|+|+. +.+++++|+++|++++..+ ..|.||||.|+..++.
T Consensus 118 ~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d--~~g~tpL~~A~~~~~~ 189 (480)
T PHA03100 118 SNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKN--RYGYTPLHIAVEKGNI 189 (480)
T ss_pred cChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccccc--CCCCCHHHHHHHhCCH
Confidence 99999999999999999999999998 788886 4689999999999998877 6899999999998874
No 42
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.56 E-value=8.6e-15 Score=127.19 Aligned_cols=110 Identities=27% Similarity=0.260 Sum_probs=101.1
Q ss_pred CCChhHHHHHhcCCHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--
Q 008477 32 VPNGDVFEASRAGDVDRLRYILESGVN-VNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL-- 107 (564)
Q Consensus 32 ~~~~~l~~Aa~~g~~~~v~~Ll~~g~~-~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~-- 107 (564)
++.+.+.+|+..+.+..|+.|++..++ +|.+|.+|+||||-|+.+||.+||+.|+..||+++.+...|+| +|.||.
T Consensus 62 dp~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWn 141 (228)
T KOG0512|consen 62 DPIRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWN 141 (228)
T ss_pred CHHHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhccc
Confidence 455778899999999999999998777 8999999999999999999999999999999999999999998 788888
Q ss_pred hHHHHHHHHhccCCCCCCCccccccccchhcccccc
Q 008477 108 NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (564)
Q Consensus 108 ~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~ 143 (564)
+.+++..|+.+|++++... ....||||+||....
T Consensus 142 N~~va~~LLqhgaDVnA~t--~g~ltpLhlaa~~rn 175 (228)
T KOG0512|consen 142 NFEVAGRLLQHGADVNAQT--KGLLTPLHLAAGNRN 175 (228)
T ss_pred chhHHHHHHhccCcccccc--cccchhhHHhhcccc
Confidence 9999999999999999876 778999999987554
No 43
>PHA02798 ankyrin-like protein; Provisional
Probab=99.56 E-value=2.1e-14 Score=154.90 Aligned_cols=128 Identities=16% Similarity=0.178 Sum_probs=109.4
Q ss_pred chhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhc-----CCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcC-
Q 008477 5 RQSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRA-----GDVDRLRYILESGVNVNARDQWDSVALYYACLAG- 77 (564)
Q Consensus 5 ~~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~-----g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g- 77 (564)
+...+...++ |+++|.+|..|.||| |.|+.+ ++.++++.|+++|+++|.+|..|+||||+|+..+
T Consensus 50 ~~~iv~~Ll~~Gadvn~~d~~g~TpL--------~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~ 121 (489)
T PHA02798 50 STDIVKLFINLGANVNGLDNEYSTPL--------CTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGY 121 (489)
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCChH--------HHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCC
Confidence 4466677777 999999999999999 988764 7789999999999999999999999999999875
Q ss_pred --CHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--h---HHHHHHHHhccCCCCCCCccccccccchhcccc
Q 008477 78 --HLDAARMLLESGAICSEHTFDGDR-CHYAAL--N---LKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (564)
Q Consensus 78 --~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~---~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~ 141 (564)
+.+++++|+++||+++..|..|.| +|+|+. + .+++++|+++|++++..+. ..|.||+|.+...
T Consensus 122 ~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~-~~~~t~Lh~~~~~ 192 (489)
T PHA02798 122 INNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNN-KEKYDTLHCYFKY 192 (489)
T ss_pred cChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccC-cCCCcHHHHHHHh
Confidence 789999999999999999999997 677776 4 7899999999998876531 4578999987654
No 44
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.56 E-value=7.2e-15 Score=134.64 Aligned_cols=120 Identities=13% Similarity=0.147 Sum_probs=104.4
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCH----HHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHH---HHHHHh
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDV----DRLRYILESGVNVNARDQWDSVALYYACLAGHLDA---ARMLLE 87 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~----~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~---v~~Ll~ 87 (564)
|++++..+..+.+++ |+||+.|+. ++++.|++.|++++.+|..|+||||+|+..|+.+. +++|++
T Consensus 10 ~~~~~~~~~~~~~~l--------~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~ 81 (166)
T PHA02743 10 NLGAVEIDEDEQNTF--------LRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVN 81 (166)
T ss_pred chHHhhhccCCCcHH--------HHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHH
Confidence 677888888889999 999999998 55667778999999999999999999999988654 899999
Q ss_pred CCCCCCCcc-CCCCc-hHHHHc--hHHHHHHHHh-ccCCCCCCCccccccccchhccccccc
Q 008477 88 SGAICSEHT-FDGDR-CHYAAL--NLKVRKLLKA-YEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 88 ~ga~~~~~d-~~g~t-l~~aa~--~~~i~~lLl~-~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
+|++++.++ ..|.| +|+|+. +.+++++|+. .|++++..+ ..|.||+|+|+..++.
T Consensus 82 ~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d--~~g~tpL~~A~~~~~~ 141 (166)
T PHA02743 82 MGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAIN--YQHETAYHIAYKMRDR 141 (166)
T ss_pred cCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcC--CCCCCHHHHHHHcCCH
Confidence 999999998 47887 788888 7899999995 799888866 7899999999988774
No 45
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.55 E-value=3.3e-14 Score=153.60 Aligned_cols=122 Identities=16% Similarity=0.132 Sum_probs=63.3
Q ss_pred hHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHh------cCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHc---C
Q 008477 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASR------AGDVDRLRYILESGVNVNARDQWDSVALYYACLA---G 77 (564)
Q Consensus 8 ~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~------~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~---g 77 (564)
.+.-.++ |+++|.++ .+.||| |.|+. .|+.+++++|+++|+++|.+|..|+||||.|+.. |
T Consensus 52 iv~~Ll~~GAdvn~~~-~~~tpL--------~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~ 122 (494)
T PHA02989 52 IVKLLIDNGADVNYKG-YIETPL--------CAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNIN 122 (494)
T ss_pred HHHHHHHcCCCccCCC-CCCCcH--------HHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccC
Confidence 3333444 55555554 345555 55432 3455555555555555555555555555554433 3
Q ss_pred CHHHHHHHHhCCCCC-CCccCCCCc-hHHHHc----hHHHHHHHHhccCCCCC-CCccccccccchhccc
Q 008477 78 HLDAARMLLESGAIC-SEHTFDGDR-CHYAAL----NLKVRKLLKAYEARPPP-LGPLQAALRDTFLGCG 140 (564)
Q Consensus 78 ~~~~v~~Ll~~ga~~-~~~d~~g~t-l~~aa~----~~~i~~lLl~~~~~~~~-~~~~~~g~t~lh~A~~ 140 (564)
+.+++++|+++|||+ +..|..|.| +|+|+. +.+++++|+++|++++. .+ ..|.||+|.|+.
T Consensus 123 ~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~--~~g~tpL~~a~~ 190 (494)
T PHA02989 123 NCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTS--LYGLTPMNIYLR 190 (494)
T ss_pred cHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccc--ccCCChHHHHHh
Confidence 455555555555555 455555554 444432 34555555555555544 22 345555555543
No 46
>PHA02946 ankyin-like protein; Provisional
Probab=99.55 E-value=4.3e-14 Score=149.84 Aligned_cols=127 Identities=15% Similarity=0.196 Sum_probs=111.0
Q ss_pred hhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcC--CHHHHHHHHHcCCCccc-cCCCCCcHHHHHHHcCCHHHH
Q 008477 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAG--DVDRLRYILESGVNVNA-RDQWDSVALYYACLAGHLDAA 82 (564)
Q Consensus 7 ~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g--~~~~v~~Ll~~g~~~n~-~d~~g~TpL~~A~~~g~~~~v 82 (564)
.++.-.++ |+++|.+|..|.||| |+|+..+ ..+++++|+++|+++|. .|..|.|||| |+..|+.+++
T Consensus 86 eiv~lLL~~GAdin~~d~~g~TpL--------h~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv 156 (446)
T PHA02946 86 RIVAMLLTHGADPNACDKQHKTPL--------YYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVF 156 (446)
T ss_pred HHHHHHHHCcCCCCCCCCCCCCHH--------HHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHH
Confidence 44555555 999999999999999 9998866 47899999999999995 6899999997 7778999999
Q ss_pred HHHHhCCCCCCCccCCCCc-hHHHHc----hHHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 83 RMLLESGAICSEHTFDGDR-CHYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 83 ~~Ll~~ga~~~~~d~~g~t-l~~aa~----~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
++|++.|++++..|..|.| +|+|+. +.+++++|+++|++++..+ ..|.||||+|+..+..
T Consensus 157 ~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d--~~G~TpLH~Aa~~~~~ 221 (446)
T PHA02946 157 KKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPD--HDGNTPLHIVCSKTVK 221 (446)
T ss_pred HHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccC--CCCCCHHHHHHHcCCC
Confidence 9999999999999999998 777766 4688999999999999877 8899999999987643
No 47
>PHA02798 ankyrin-like protein; Provisional
Probab=99.53 E-value=2.8e-14 Score=153.98 Aligned_cols=128 Identities=18% Similarity=0.184 Sum_probs=107.1
Q ss_pred hhHHhhcCCCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHc-----CCHHH
Q 008477 7 STIDAELDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLA-----GHLDA 81 (564)
Q Consensus 7 ~~l~~~~~g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~-----g~~~~ 81 (564)
.++...+++.+++.. ..|.|++ ..+.+...++.++++.|+++|+++|.+|..|.||||+|+.+ ++.++
T Consensus 19 ~~v~~ll~~~~~~~~-~~~~~~~------~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~i 91 (489)
T PHA02798 19 STVKLLIKSCNPNEI-VNEYSIF------QKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDI 91 (489)
T ss_pred HHHHHHHhcCChhhh-cccchHH------HHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHH
Confidence 566677776666554 4567777 11344456789999999999999999999999999998764 67899
Q ss_pred HHHHHhCCCCCCCccCCCCc-hHHHHc-----hHHHHHHHHhccCCCCCCCccccccccchhcccccc
Q 008477 82 ARMLLESGAICSEHTFDGDR-CHYAAL-----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (564)
Q Consensus 82 v~~Ll~~ga~~~~~d~~g~t-l~~aa~-----~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~ 143 (564)
+++|+++|||+|..|..|.| +|+|+. +.+++++|+++|++++..+ ..|.||||.|++.++
T Consensus 92 v~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d--~~g~tpL~~a~~~~~ 157 (489)
T PHA02798 92 VKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLD--KDGFTMLQVYLQSNH 157 (489)
T ss_pred HHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccC--CCCCcHHHHHHHcCC
Confidence 99999999999999999998 788876 5789999999999999877 889999999998876
No 48
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.53 E-value=3.7e-14 Score=129.90 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=95.2
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHH---HHHHHHcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHh-CC
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDR---LRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLE-SG 89 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~---v~~Ll~~g~~~n~~d-~~g~TpL~~A~~~g~~~~v~~Ll~-~g 89 (564)
|++++.+|..|+||| |+|+..|+.+. +++|++.|+++|.+| ..|.||||+|+..|+.+++++|++ .|
T Consensus 47 g~~~~~~d~~g~t~L--------h~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~g 118 (166)
T PHA02743 47 GHLLHRYDHHGRQCT--------HMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLG 118 (166)
T ss_pred chhhhccCCCCCcHH--------HHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccC
Confidence 888999999999999 99999988654 789999999999998 589999999999999999999995 79
Q ss_pred CCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCC
Q 008477 90 AICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLG 126 (564)
Q Consensus 90 a~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~ 126 (564)
++++.+|..|.| +|+|+. +.+++++|+.+|++.+..+
T Consensus 119 ad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~ 158 (166)
T PHA02743 119 VNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPL 158 (166)
T ss_pred CCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcc
Confidence 999999999998 788887 7899999999999888755
No 49
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown]
Probab=99.53 E-value=4.8e-14 Score=141.09 Aligned_cols=141 Identities=21% Similarity=0.258 Sum_probs=114.5
Q ss_pred ccccCCCCccEEEEeCC-----eEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHh
Q 008477 335 ISDHVDDLADVCVRVDK-----KIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEY 409 (564)
Q Consensus 335 ~~~~~~~~~Dv~~~~~~-----~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~ 409 (564)
.+.++...+|+.|++++ ..+||||.+|+..|+.|.+||++ +|.|. ...+|.++++.+.+|..+|+|
T Consensus 107 ~l~~n~~~adv~fivg~~~~~~q~~paHk~vla~gS~VFdaMf~g--~~a~~-------~s~ei~lpdvepaaFl~~L~f 177 (521)
T KOG2075|consen 107 ALFNNELLADVHFIVGEEDGGSQRIPAHKLVLADGSDVFDAMFYG--GLAED-------ASLEIRLPDVEPAAFLAFLRF 177 (521)
T ss_pred hhccCcccceeEEEeccCCCcccccchhhhhhhcchHHHHHHhcc--Ccccc-------cCceeecCCcChhHhHHHHHH
Confidence 35667899999999963 46999999999999999999998 66654 346999999999999999999
Q ss_pred hccCCCCCCCCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHHH-H
Q 008477 410 MYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWL-I 488 (564)
Q Consensus 410 iYt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~l-~ 488 (564)
||++.+ .+..+ +++.+|.+|++|.++.|.+.|.++|.+.+ ...|.+..| +
T Consensus 178 lYsdev-~~~~d-------------------------tvi~tl~~AkKY~VpaLer~CVkflr~~l---~~~naf~~L~q 228 (521)
T KOG2075|consen 178 LYSDEV-KLAAD-------------------------TVITTLYAAKKYLVPALERQCVKFLRKNL---MADNAFLELFQ 228 (521)
T ss_pred Hhcchh-hhhHH-------------------------HHHHHHHHHHHhhhHHHHHHHHHHHHHhc---CChHHHHHHHH
Confidence 999999 78888 99999999999999999999999999998 555554444 4
Q ss_pred HHHhhcch----hhcchh--hHHHHHHHhhH
Q 008477 489 LSDMYAAI----VCSSLS--ILLVFLFSIFY 513 (564)
Q Consensus 489 ~A~~~~~~----~c~~l~--~~~~~~~~~~~ 513 (564)
.|..++-. .|+... ++...+..+++
T Consensus 229 ~A~lf~ep~Li~~c~e~id~~~~~al~~EGf 259 (521)
T KOG2075|consen 229 RAKLFDEPSLISICLEVIDKSFEDALTPEGF 259 (521)
T ss_pred HHHhhcCHHHHHHHHHHhhhHHHhhhCccce
Confidence 47777644 565554 44444444443
No 50
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.53 E-value=1.4e-14 Score=144.04 Aligned_cols=114 Identities=22% Similarity=0.284 Sum_probs=105.8
Q ss_pred CCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc
Q 008477 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR 101 (564)
Q Consensus 22 d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t 101 (564)
.-.|.+|| ..|+..||+++|+.|+.+|+++|.......|||.-||.-|+.++++||+++|+|+++.|+.|.|
T Consensus 81 ~IegappL--------WaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhT 152 (615)
T KOG0508|consen 81 TIEGAPPL--------WAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHT 152 (615)
T ss_pred ccCCCchh--------hHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCe
Confidence 34567777 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccch
Q 008477 102 -CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQF 145 (564)
Q Consensus 102 -l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~ 145 (564)
+|.||. +.+|+++|++.|++++..+ -.|+|+||.|++.++..
T Consensus 153 cLmIa~ykGh~~I~qyLle~gADvn~ks--~kGNTALH~caEsG~vd 197 (615)
T KOG0508|consen 153 CLMIACYKGHVDIAQYLLEQGADVNAKS--YKGNTALHDCAESGSVD 197 (615)
T ss_pred eEEeeeccCchHHHHHHHHhCCCcchhc--ccCchHHHhhhhcccHH
Confidence 788888 9999999999999999977 88999999999988843
No 51
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.53 E-value=3.4e-14 Score=155.89 Aligned_cols=124 Identities=12% Similarity=0.098 Sum_probs=106.1
Q ss_pred hhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCC--HHHHHHHHHcCCCccccCCCCCcHHHHH----------
Q 008477 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGD--VDRLRYILESGVNVNARDQWDSVALYYA---------- 73 (564)
Q Consensus 7 ~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~--~~~v~~Ll~~g~~~n~~d~~g~TpL~~A---------- 73 (564)
.++...++ |+++|.+|..|.||| |+|+..|+ .+++++|+++|+++|.+|..|+||||+|
T Consensus 193 eIVklLLe~GADVN~kD~~G~TPL--------H~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~E 264 (764)
T PHA02716 193 DILEWLCNNGVNVNLQNNHLITPL--------HTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPE 264 (764)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHH--------HHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHH
Confidence 45555565 999999999999999 99999995 5899999999999999999999999975
Q ss_pred ---------------------------HHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc----hHHHHHHHHhccCC
Q 008477 74 ---------------------------CLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL----NLKVRKLLKAYEAR 121 (564)
Q Consensus 74 ---------------------------~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~----~~~i~~lLl~~~~~ 121 (564)
+..|+.+++++|+++|++++.+|..|.| +|+|+. +.+++++|+++|++
T Consensus 265 IvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GAD 344 (764)
T PHA02716 265 ITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGND 344 (764)
T ss_pred HHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCC
Confidence 3457788899999999999999999987 677653 56889999999998
Q ss_pred CCCCCccccccccchhccc
Q 008477 122 PPPLGPLQAALRDTFLGCG 140 (564)
Q Consensus 122 ~~~~~~~~~g~t~lh~A~~ 140 (564)
++..+ ..|.||||.|+.
T Consensus 345 IN~kD--~~G~TPLH~A~~ 361 (764)
T PHA02716 345 LNEPD--NIGNTVLHTYLS 361 (764)
T ss_pred CccCC--CCCCCHHHHHHH
Confidence 88866 789999998764
No 52
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.53 E-value=3.4e-14 Score=162.11 Aligned_cols=128 Identities=23% Similarity=0.237 Sum_probs=112.8
Q ss_pred hhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q 008477 6 QSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARM 84 (564)
Q Consensus 6 ~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~ 84 (564)
...+...++ |+++|..|..|.||| |+||..|+.++++.|+++|+++|.+|.+|+||||+|+..|+.+++++
T Consensus 538 ~~~l~~Ll~~G~d~n~~d~~G~TpL--------h~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~ 609 (823)
T PLN03192 538 AALLEELLKAKLDPDIGDSKGRTPL--------HIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRI 609 (823)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHH--------HHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHH
Confidence 345666666 999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCccCCCCchHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 85 LLESGAICSEHTFDGDRCHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 85 Ll~~ga~~~~~d~~g~tl~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
|++.++..+.. ..+.++|.|+. +.++++.|+++|++++..+ ..|.||||.|+..++.
T Consensus 610 L~~~~~~~~~~-~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d--~~G~TpLh~A~~~g~~ 668 (823)
T PLN03192 610 LYHFASISDPH-AAGDLLCTAAKRNDLTAMKELLKQGLNVDSED--HQGATALQVAMAEDHV 668 (823)
T ss_pred HHhcCcccCcc-cCchHHHHHHHhCCHHHHHHHHHCCCCCCCCC--CCCCCHHHHHHHCCcH
Confidence 99888765532 22334888888 8999999999999999877 8899999999998884
No 53
>PHA03095 ankyrin-like protein; Provisional
Probab=99.52 E-value=4.8e-14 Score=151.74 Aligned_cols=128 Identities=17% Similarity=0.168 Sum_probs=113.3
Q ss_pred hhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcC-CHHHHHHHHHcCCCccccCCCCCcHHHHHH--HcCCHHH
Q 008477 6 QSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAG-DVDRLRYILESGVNVNARDQWDSVALYYAC--LAGHLDA 81 (564)
Q Consensus 6 ~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g-~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~--~~g~~~~ 81 (564)
...+...++ |+++|.+|..|.||| |+|+..| +.++++.|+++|+++|.+|..|.||||+|+ ..++.++
T Consensus 63 ~~iv~~Ll~~Gadin~~~~~g~TpL--------h~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~i 134 (471)
T PHA03095 63 KDIVRLLLEAGADVNAPERCGFTPL--------HLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKV 134 (471)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHH--------HHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHH
Confidence 344555666 999999999999999 9999999 599999999999999999999999999999 5578999
Q ss_pred HHHHHhCCCCCCCccCCCCc-hHHHHc----hHHHHHHHHhccCCCCCCCccccccccchhcccccc
Q 008477 82 ARMLLESGAICSEHTFDGDR-CHYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (564)
Q Consensus 82 v~~Ll~~ga~~~~~d~~g~t-l~~aa~----~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~ 143 (564)
+++|+++|++++..|..|.| +|+++. +.+++++|+++|+++...+ ..|.||+|.|++..+
T Consensus 135 v~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d--~~g~t~Lh~~~~~~~ 199 (471)
T PHA03095 135 IRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVD--DRFRSLLHHHLQSFK 199 (471)
T ss_pred HHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccC--CCCCCHHHHHHHHCC
Confidence 99999999999999999998 676665 5789999999999988765 789999999987644
No 54
>PHA02917 ankyrin-like protein; Provisional
Probab=99.51 E-value=6.1e-14 Score=154.51 Aligned_cols=136 Identities=13% Similarity=0.127 Sum_probs=112.2
Q ss_pred hhHHhhcC-CCCCCCCCCCCCCCCCC---CCC------------------------hhHHHHHhcCCHHHHHHHHHcCCC
Q 008477 7 STIDAELD-EIDLDASDFSSSVPLKK---VPN------------------------GDVFEASRAGDVDRLRYILESGVN 58 (564)
Q Consensus 7 ~~l~~~~~-g~~v~~~d~~g~tpL~~---~~~------------------------~~l~~Aa~~g~~~~v~~Ll~~g~~ 58 (564)
..+...++ |++++.++..|+|||+. .+. ..+|+|+.+|+.+++++|+++|++
T Consensus 49 ~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gad 128 (661)
T PHA02917 49 EVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFD 128 (661)
T ss_pred HHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCC
Confidence 44555566 99999999999999963 110 223467788899999999999999
Q ss_pred ccccCCCCCcHHHHHH--HcCCHHHHHHHHhCCCCCCCccC---CC-----------Cc-hHHHHc-------------h
Q 008477 59 VNARDQWDSVALYYAC--LAGHLDAARMLLESGAICSEHTF---DG-----------DR-CHYAAL-------------N 108 (564)
Q Consensus 59 ~n~~d~~g~TpL~~A~--~~g~~~~v~~Ll~~ga~~~~~d~---~g-----------~t-l~~aa~-------------~ 108 (564)
+|.+|.+|+||||+|+ ..|+.+++++|+++||+++..|. .| .| +|+|+. +
T Consensus 129 in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~ 208 (661)
T PHA02917 129 LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVR 208 (661)
T ss_pred CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCc
Confidence 9999999999999654 57899999999999999986553 23 35 888874 5
Q ss_pred HHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 109 LKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 109 ~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
.+++++|+.+|++++..+ ..|.||||+|+..++.
T Consensus 209 ~eiv~~Li~~Gadvn~~d--~~G~TpLh~A~~~g~~ 242 (661)
T PHA02917 209 PEVVKCLINHGIKPSSID--KNYCTALQYYIKSSHI 242 (661)
T ss_pred HHHHHHHHHCCCCcccCC--CCCCcHHHHHHHcCCC
Confidence 689999999999999877 8899999999998875
No 55
>PHA02795 ankyrin-like protein; Provisional
Probab=99.49 E-value=9.4e-14 Score=142.95 Aligned_cols=127 Identities=9% Similarity=0.004 Sum_probs=109.3
Q ss_pred chhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCcc-cc-----CCCCCcHHHHHHHcC
Q 008477 5 RQSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVN-AR-----DQWDSVALYYACLAG 77 (564)
Q Consensus 5 ~~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n-~~-----d~~g~TpL~~A~~~g 77 (564)
...++.-.++ |++++.. .+.||+ |+|+..|+.+++++|+++|++.+ .. +..|.||+|.|+..+
T Consensus 130 ~~eiV~~LI~~GADIn~~--~~~t~l--------h~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~ 199 (437)
T PHA02795 130 EIDIVDFMVDHGAVIYKI--ECLNAY--------FRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPT 199 (437)
T ss_pred CHHHHHHHHHCCCCCCCC--CCCCHH--------HHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcC
Confidence 3455666666 9999984 458899 99999999999999999998542 22 235889999999999
Q ss_pred CHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhcccccc
Q 008477 78 HLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (564)
Q Consensus 78 ~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~ 143 (564)
+.+++++|+++||+++.+|..|.| +|+|+. +.+++++|+++|++++..+ ..|.||||.|+..+.
T Consensus 200 ~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d--~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 200 VLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVM--SNGYTCLDVAVDRGS 266 (437)
T ss_pred HHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC--CCCCCHHHHHHHcCC
Confidence 999999999999999999999998 788887 8999999999999999977 889999999998774
No 56
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.49 E-value=1.2e-13 Score=149.30 Aligned_cols=130 Identities=17% Similarity=0.195 Sum_probs=103.9
Q ss_pred hhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhc---CCHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHc--CCH
Q 008477 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNV-NARDQWDSVALYYACLA--GHL 79 (564)
Q Consensus 7 ~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~---g~~~~v~~Ll~~g~~~-n~~d~~g~TpL~~A~~~--g~~ 79 (564)
.++.-.++ |+++|.+|..|.||| |.|+.. |+.+++++|+++|+++ +.+|..|+||||+|+.. ++.
T Consensus 89 ~iv~~Ll~~Gadin~~d~~g~tpL--------~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~ 160 (494)
T PHA02989 89 KIVKLLLKFGADINLKTFNGVSPI--------VCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKK 160 (494)
T ss_pred HHHHHHHHCCCCCCCCCCCCCcHH--------HHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCH
Confidence 45555566 999999999999999 877654 6789999999999999 78999999999998754 688
Q ss_pred HHHHHHHhCCCCCCC-ccCCCCc-hHHHHc------hHHHHHHHHhccCCCCCCCc------------------------
Q 008477 80 DAARMLLESGAICSE-HTFDGDR-CHYAAL------NLKVRKLLKAYEARPPPLGP------------------------ 127 (564)
Q Consensus 80 ~~v~~Ll~~ga~~~~-~d~~g~t-l~~aa~------~~~i~~lLl~~~~~~~~~~~------------------------ 127 (564)
+++++|+++|++++. .+..|.| +|.++. +.+++++|+++|++++..+.
T Consensus 161 ~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il 240 (494)
T PHA02989 161 DVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVL 240 (494)
T ss_pred HHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHH
Confidence 999999999999987 5777877 566544 56888999988887654331
Q ss_pred ------------cccccccchhccccccc
Q 008477 128 ------------LQAALRDTFLGCGANRQ 144 (564)
Q Consensus 128 ------------~~~g~t~lh~A~~~~~~ 144 (564)
...|.||||.|+..++.
T Consensus 241 ~~l~~~advn~~d~~G~TpL~~Aa~~~~~ 269 (494)
T PHA02989 241 NFILKYIKINKKDKKGFNPLLISAKVDNY 269 (494)
T ss_pred HHHHhCCCCCCCCCCCCCHHHHHHHhcCH
Confidence 13488999999987774
No 57
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.48 E-value=6.2e-14 Score=148.01 Aligned_cols=124 Identities=20% Similarity=0.235 Sum_probs=109.0
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh-CC-CCCCC
Q 008477 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE-SG-AICSE 94 (564)
Q Consensus 17 ~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~-~g-a~~~~ 94 (564)
-+|..|.+|.||| |+||+.|+.+.+..|+..|++++.++.++.||||.|+.+|+.++|+-||+ .| ...+.
T Consensus 265 lv~~~d~dg~tpL--------H~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne 336 (929)
T KOG0510|consen 265 LVNDEDNDGCTPL--------HYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNE 336 (929)
T ss_pred HhhcccccCCchH--------HHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCcccccc
Confidence 3678899999999 99999999999999999999999999999999999999999999999998 55 56788
Q ss_pred ccCCCCc-hHHHHc--hHHHHHHHHhccCCCCC-CCccccccccchhccccccchhhh
Q 008477 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPP-LGPLQAALRDTFLGCGANRQFLEE 148 (564)
Q Consensus 95 ~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~-~~~~~~g~t~lh~A~~~~~~~l~~ 148 (564)
.|-.|.| +|.|+. +..++++|++.|+.... .....+|.|+||+|+.++++....
T Consensus 337 ~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~ 394 (929)
T KOG0510|consen 337 SDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQ 394 (929)
T ss_pred ccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHH
Confidence 8999997 788888 89999999999997762 111378999999999999964333
No 58
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.48 E-value=1.5e-13 Score=154.44 Aligned_cols=118 Identities=26% Similarity=0.264 Sum_probs=86.7
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhc-CCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRA-GDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~-g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 93 (564)
|++++..|..|.||| |+|+.. ++.++++.|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 331 gadin~~d~~g~TpL--------h~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~ 402 (682)
T PHA02876 331 GADVNAADRLYITPL--------HQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE 402 (682)
T ss_pred CCCCCCcccCCCcHH--------HHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc
Confidence 445555555555555 777764 45677777777888888888888888888888888888888888888888
Q ss_pred CccCCCCc-hHHHHc---hHHHHHHHHhccCCCCCCCccccccccchhccccc
Q 008477 94 EHTFDGDR-CHYAAL---NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (564)
Q Consensus 94 ~~d~~g~t-l~~aa~---~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~ 142 (564)
..+..|.| +|+|+. ...++++|+++|++++..+ ..|.||||+|+..+
T Consensus 403 ~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d--~~G~TpLh~Aa~~~ 453 (682)
T PHA02876 403 ALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKN--KDLSTPLHYACKKN 453 (682)
T ss_pred ccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCC--CCCChHHHHHHHhC
Confidence 77777776 677765 3456778888888877766 77888888888755
No 59
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.48 E-value=1.7e-13 Score=153.97 Aligned_cols=118 Identities=19% Similarity=0.254 Sum_probs=109.4
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCC-HHHHHHHHhCCCCCC
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH-LDAARMLLESGAICS 93 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~-~~~v~~Ll~~ga~~~ 93 (564)
|+++|.+|..|.||| |+|+..|+.++++.|++.|++++..+..|.||||+|+..++ ..++++|+++|++++
T Consensus 365 gadin~~d~~G~TpL--------h~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin 436 (682)
T PHA02876 365 GANVNARDYCDKTPI--------HYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVN 436 (682)
T ss_pred CCCCccCCCCCCCHH--------HHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 999999999999999 99999999999999999999999999999999999988665 567999999999999
Q ss_pred CccCCCCc-hHHHHc---hHHHHHHHHhccCCCCCCCccccccccchhccccc
Q 008477 94 EHTFDGDR-CHYAAL---NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (564)
Q Consensus 94 ~~d~~g~t-l~~aa~---~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~ 142 (564)
.+|..|.| +|+|+. +.+++++|+++|++++..+ ..|.||+|.|+..+
T Consensus 437 ~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d--~~g~tpl~~a~~~~ 487 (682)
T PHA02876 437 SKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAIN--IQNQYPLLIALEYH 487 (682)
T ss_pred cCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCC--CCCCCHHHHHHHhC
Confidence 99999998 788887 4789999999999999977 88999999998643
No 60
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.47 E-value=3.8e-13 Score=109.67 Aligned_cols=85 Identities=34% Similarity=0.531 Sum_probs=77.8
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHH
Q 008477 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRK 113 (564)
Q Consensus 37 l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~ 113 (564)
||+|+..|+.++++.|++.|.+++. |.||||+|+..|+.+++++|+++|++++.+|..|.| +|+|+. +.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 5999999999999999999988877 899999999999999999999999999999999998 788888 899999
Q ss_pred HHHhccCCCCCC
Q 008477 114 LLKAYEARPPPL 125 (564)
Q Consensus 114 lLl~~~~~~~~~ 125 (564)
+|+++|++++.+
T Consensus 77 ~Ll~~g~~~~~~ 88 (89)
T PF12796_consen 77 LLLEHGADVNIR 88 (89)
T ss_dssp HHHHTTT-TTSS
T ss_pred HHHHcCCCCCCc
Confidence 999999988764
No 61
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.45 E-value=6.9e-13 Score=117.66 Aligned_cols=132 Identities=21% Similarity=0.317 Sum_probs=103.8
Q ss_pred ccccCCCCCCCCCCCCeEEEecC---eeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHccCC
Q 008477 157 GVTSNGASNSDSFPPDVVFYVQG---RPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDR 233 (564)
Q Consensus 157 ~l~~~~~~~~~~~~~Dv~~~v~~---~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~ 233 (564)
+++..+.++ |++|.++| +.+++||.||++||.+++ |.++-.| ...+..+.++++++|...++||||++
T Consensus 59 dL~Ek~qfS------Dlk~K~~gns~k~i~AHKfVLAARsD~Wk--faN~~de-kse~~~~dDad~Ea~~t~iRWIYTDE 129 (280)
T KOG4591|consen 59 DLLEKEQFS------DLKFKFAGNSDKHIPAHKFVLAARSDFWK--FANGGDE-KSEELDLDDADFEAFHTAIRWIYTDE 129 (280)
T ss_pred HHhhccccc------ceeEEecCCccccCchhhhhhhhhcchhh--hccCCCc-chhhhcccccCHHHHHHhheeeeccc
Confidence 455555444 99999974 789999999999999986 3332222 34566778999999999999999999
Q ss_pred ccCCcc--cHHHHHHHHhHhcHHHHHHHHH----------HHHHHHHHHHHcCcHHHHHHHHHHHhhcCC-CCCCCc
Q 008477 234 LEIAVD--DMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA-LPEEDR 297 (564)
Q Consensus 234 ~~i~~~--~~~~ll~~a~~c~~~~L~~~l~----------~~l~~~~~a~~~~~~~L~~~~~~~i~~~~~-v~~~~~ 297 (564)
+++..+ .+.++.++|..++.+.|++.++ ||+.++.+|+..+...|...|...|..++. +....|
T Consensus 130 idfk~dD~~L~el~e~An~FqLe~Lke~C~k~l~a~l~V~NCIk~Ye~AEe~n~~qL~n~~~eiIA~~W~dL~~a~F 206 (280)
T KOG4591|consen 130 IDFKEDDEFLLELCELANRFQLELLKERCEKGLGALLHVDNCIKFYEFAEELNARQLMNVAAEIIAGAWDDLGKADF 206 (280)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHhhHHHHHHHHHHhhHHHHHHHHHHHHHhhccccChHHH
Confidence 988665 4678888886665666655543 799999999999999999999999999987 544444
No 62
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....
Probab=99.44 E-value=2.2e-13 Score=115.96 Aligned_cols=92 Identities=25% Similarity=0.434 Sum_probs=75.2
Q ss_pred CCCCCeEEEec-CeeechhhHhhcccChhHHHhcccc-ccccccceEEcCCCCHHHHHHHhhhHccCCccCC-cccHHHH
Q 008477 168 SFPPDVVFYVQ-GRPIEAHRVILSARSVFFRRKFETD-WRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIA-VDDMEDL 244 (564)
Q Consensus 168 ~~~~Dv~~~v~-~~~~~~Hk~iL~a~S~~f~~l~~~~-~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~-~~~~~~l 244 (564)
+.++|++|.++ +.+|++||.+|+++|+||+.+|.+. +.+....++.++++++++|..+++|+|+|.+.++ .+++.++
T Consensus 8 ~~~~D~~i~v~d~~~~~vhk~iL~~~S~~F~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~Y~~~~~~~~~~~~~~l 87 (111)
T PF00651_consen 8 NEFSDVTIRVGDGKTFYVHKNILAARSPYFRNLFEGSKFKESTVPEISLPDVSPEAFEAFLEYMYTGEIEINSDENVEEL 87 (111)
T ss_dssp TTS--EEEEETTTEEEEE-HHHHHHHBHHHHHHHTTTTSTTSSEEEEEETTSCHHHHHHHHHHHHHSEEEEE-TTTHHHH
T ss_pred CCCCCEEEEECCCEEEeechhhhhccchhhhhcccccccccccccccccccccccccccccccccCCcccCCHHHHHHHH
Confidence 45679999999 8999999999999999999999988 6666667899999999999999999999999887 7777777
Q ss_pred HHHHhHhcHHHHHHH
Q 008477 245 VKICKVCKCESLQRI 259 (564)
Q Consensus 245 l~~a~~c~~~~L~~~ 259 (564)
+.+|+.++++.|.+.
T Consensus 88 l~lA~~~~~~~L~~~ 102 (111)
T PF00651_consen 88 LELADKLQIPELKKA 102 (111)
T ss_dssp HHHHHHTTBHHHHHH
T ss_pred HHHHHHhCcHHHHHH
Confidence 777766544444433
No 63
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.44 E-value=3.2e-13 Score=105.10 Aligned_cols=98 Identities=24% Similarity=0.438 Sum_probs=75.2
Q ss_pred HHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 008477 9 IDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE 87 (564)
Q Consensus 9 l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~ 87 (564)
+.+.+. |.+||..- .|++|| |||+-.|.++++++|+..|++++.+|+.|.|||.-|+..||.+||++||+
T Consensus 18 Vk~~v~~g~nVn~~~-ggR~pl--------hyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~ 88 (117)
T KOG4214|consen 18 VKQSVNEGLNVNEIY-GGRTPL--------HYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQ 88 (117)
T ss_pred HHHHHHccccHHHHh-CCcccc--------hHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHH
Confidence 334443 55665433 678888 88888888888888888888888888888888888888888888888888
Q ss_pred CCCCCCCccCCCCchHHHHchHHHHHHH
Q 008477 88 SGAICSEHTFDGDRCHYAALNLKVRKLL 115 (564)
Q Consensus 88 ~ga~~~~~d~~g~tl~~aa~~~~i~~lL 115 (564)
+||+-.....+|.++..|+.+.+|.++|
T Consensus 89 ~GAdrt~~~PdG~~~~eate~edIr~LL 116 (117)
T KOG4214|consen 89 NGADRTIHAPDGTALIEATEEEDIRELL 116 (117)
T ss_pred cCcccceeCCCchhHHhhccHHHHHHHh
Confidence 8888877777887777776677776655
No 64
>PHA02917 ankyrin-like protein; Provisional
Probab=99.44 E-value=9.2e-13 Score=145.28 Aligned_cols=125 Identities=14% Similarity=0.002 Sum_probs=100.6
Q ss_pred hHHhhc-CCCCCCCCCCCCCCCCCCCCChhHHHHHhc---CCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcC------
Q 008477 8 TIDAEL-DEIDLDASDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNVNARDQWDSVALYYACLAG------ 77 (564)
Q Consensus 8 ~l~~~~-~g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~---g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g------ 77 (564)
.+.+.+ +|.+++.+|..|.||| |+|+.. |+.+++++|++.|++++.++..|+||||+|+..|
T Consensus 14 ~~~~l~~~~~~~~~~d~~g~t~L--------h~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~ 85 (661)
T PHA02917 14 ELKQMLRDRDPNDTRNQFKNNAL--------HAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNK 85 (661)
T ss_pred HHHHHHhccCcccccCCCCCcHH--------HHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHH
Confidence 344555 4888999999999999 997655 8899999999999999999999999999887644
Q ss_pred -----------------------------CHHHHHHHHhCCCCCCCccCCCCc-hHHHH-c---hHHHHHHHHhccCCCC
Q 008477 78 -----------------------------HLDAARMLLESGAICSEHTFDGDR-CHYAA-L---NLKVRKLLKAYEARPP 123 (564)
Q Consensus 78 -----------------------------~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa-~---~~~i~~lLl~~~~~~~ 123 (564)
+.+++++|+++|+|++..|..|.| +|.++ . +.+++++|+++|++++
T Consensus 86 ~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn 165 (661)
T PHA02917 86 DIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL 165 (661)
T ss_pred HHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc
Confidence 457788888999999999999988 56433 2 7899999999999886
Q ss_pred CCCcc-ccc-----------cccchhccc
Q 008477 124 PLGPL-QAA-----------LRDTFLGCG 140 (564)
Q Consensus 124 ~~~~~-~~g-----------~t~lh~A~~ 140 (564)
..+.. ..| .||||.|+.
T Consensus 166 ~~d~~~~~g~~~~~~~~~~~~t~L~~a~~ 194 (661)
T PHA02917 166 YEDEDDEYGYAYDDYQPRNCGTVLHLYII 194 (661)
T ss_pred ccccccccccccccccccccccHHHHHHh
Confidence 53311 123 599999875
No 65
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.43 E-value=6.3e-13 Score=130.01 Aligned_cols=124 Identities=21% Similarity=0.253 Sum_probs=110.9
Q ss_pred cccCCCCccEEEEeCCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcC--CCCHHHHHHHhHhhccC
Q 008477 336 SDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH--DLSKETFEKMIEYMYTD 413 (564)
Q Consensus 336 ~~~~~~~~Dv~~~~~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~--~v~~~~~~~~l~~iYt~ 413 (564)
+..+++.|||++.+-|++++.||.-| ..|+||.+||+| .|+|++.+ ...++|. .|+.+++..++.=+|.+
T Consensus 63 lf~q~enSDv~l~alg~eWrlHk~yL-~QS~yf~smf~G--tw~es~~~-----iIqleI~Dp~Id~~al~~a~gsLY~d 134 (488)
T KOG4682|consen 63 LFLQGENSDVILEALGFEWRLHKPYL-FQSEYFKSMFSG--TWKESSMN-----IIQLEIPDPNIDVVALQVAFGSLYRD 134 (488)
T ss_pred HHhcCCCcceehhhccceeeeeeeee-eccHHHHHHhcc--ccChhhCc-----eEEEEcCCCcccHHHHHHHHhhhhhh
Confidence 45578999999999999999999999 799999999998 89888652 2233333 69999999999999999
Q ss_pred CCCCCCCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHHHHHHHhh
Q 008477 414 GLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMY 493 (564)
Q Consensus 414 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~ 493 (564)
++ ++..+ .+..++.+|..+++++|.+.|.+.++..| +++|++..++.|..|
T Consensus 135 Ev-eI~l~-------------------------dv~gvlAaA~~lqldgl~qrC~evMie~l---spkta~~yYea~ckY 185 (488)
T KOG4682|consen 135 EV-EIKLS-------------------------DVVGVLAAACLLQLDGLIQRCGEVMIETL---SPKTACGYYEAACKY 185 (488)
T ss_pred he-eccHH-------------------------HHHHHHHHHHHHHHhhHHHHHHHHHHHhc---ChhhhhHhhhhhhhh
Confidence 99 78877 99999999999999999999999999998 999999999999999
Q ss_pred cch
Q 008477 494 AAI 496 (564)
Q Consensus 494 ~~~ 496 (564)
+..
T Consensus 186 gle 188 (488)
T KOG4682|consen 186 GLE 188 (488)
T ss_pred hhH
Confidence 943
No 66
>PHA02741 hypothetical protein; Provisional
Probab=99.43 E-value=4.5e-13 Score=123.27 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=91.2
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCC----HHHHHHHHHcCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHh-C
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGD----VDRLRYILESGVNVNARDQ-WDSVALYYACLAGHLDAARMLLE-S 88 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~----~~~v~~Ll~~g~~~n~~d~-~g~TpL~~A~~~g~~~~v~~Ll~-~ 88 (564)
|++++.+|..|+||| |+|+..|+ .+++++|++.|+++|.++. .|+||||+|+..++.+++++|+. .
T Consensus 50 ga~in~~d~~g~T~L--------h~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~ 121 (169)
T PHA02741 50 AAALNATDDAGQMCI--------HIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQP 121 (169)
T ss_pred hhhhhccCCCCCcHH--------HHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 688999999999999 99999999 5889999999999999985 99999999999999999999997 5
Q ss_pred CCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCC
Q 008477 89 GAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARP 122 (564)
Q Consensus 89 ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~ 122 (564)
|++++..|..|.| +|.|+. +.+++++|+++++..
T Consensus 122 g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 122 GIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 9999999999998 677777 789999999887654
No 67
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.41 E-value=2.4e-13 Score=123.17 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=93.9
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcC--CC-----ccccCCCCCcHHHHHHHcCCHH---HHHHHH
Q 008477 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESG--VN-----VNARDQWDSVALYYACLAGHLD---AARMLL 86 (564)
Q Consensus 17 ~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g--~~-----~n~~d~~g~TpL~~A~~~g~~~---~v~~Ll 86 (564)
..+.+|..|.||| |+|+..|+.. ..+...+ .+ ++.+|..|+||||+|+..|+.+ ++++|+
T Consensus 9 ~~~~~d~~g~tpL--------h~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll 78 (154)
T PHA02736 9 FASEPDIEGENIL--------HYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLM 78 (154)
T ss_pred HHHhcCCCCCCHH--------HHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHH
Confidence 3456788999999 9999999843 3332222 12 3456889999999999999874 688999
Q ss_pred hCCCCCCCcc-CCCCc-hHHHHc--hHHHHHHHHh-ccCCCCCCCccccccccchhccccccc
Q 008477 87 ESGAICSEHT-FDGDR-CHYAAL--NLKVRKLLKA-YEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 87 ~~ga~~~~~d-~~g~t-l~~aa~--~~~i~~lLl~-~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
+.|++++.++ ..|.| +|+|+. +.+++++|+. .|++++..+ ..|.||+|+|+..++.
T Consensus 79 ~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~--~~g~tpL~~A~~~~~~ 139 (154)
T PHA02736 79 EWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILN--YAFKTPYYVACERHDA 139 (154)
T ss_pred HcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcccc--CCCCCHHHHHHHcCCH
Confidence 9999999998 48988 788888 8899999997 488888866 8899999999987764
No 68
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.40 E-value=1.4e-12 Score=129.20 Aligned_cols=103 Identities=26% Similarity=0.292 Sum_probs=89.9
Q ss_pred hhhHHhhcC-CCCCCCC----CCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCcccc-CCCCCcHHHHHHHcCCH
Q 008477 6 QSTIDAELD-EIDLDAS----DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR-DQWDSVALYYACLAGHL 79 (564)
Q Consensus 6 ~~~l~~~~~-g~~v~~~----d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~-d~~g~TpL~~A~~~g~~ 79 (564)
..++...++ |+++|.+ +..|.||| |+|+..|+.+++++|+++|+++|.+ +..|.||||+|+..|+.
T Consensus 46 ~eivk~LL~~GAdiN~~~~~sd~~g~TpL--------h~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~ 117 (300)
T PHA02884 46 TDIIDAILKLGADPEAPFPLSENSKTNPL--------IYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCL 117 (300)
T ss_pred HHHHHHHHHCCCCccccCcccCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCH
Confidence 456666676 9999987 46899999 9999999999999999999999996 46899999999999999
Q ss_pred HHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHH
Q 008477 80 DAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLK 116 (564)
Q Consensus 80 ~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl 116 (564)
+++++|+.+|++++..|..|.| +|+|+. +..++.++.
T Consensus 118 eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~ 157 (300)
T PHA02884 118 KCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC 157 (300)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc
Confidence 9999999999999999999988 677776 555554444
No 69
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.40 E-value=3.9e-13 Score=129.91 Aligned_cols=117 Identities=22% Similarity=0.252 Sum_probs=97.8
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcC-CCccccCCC-------------------------------
Q 008477 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESG-VNVNARDQW------------------------------- 65 (564)
Q Consensus 18 v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g-~~~n~~d~~------------------------------- 65 (564)
||..|.+|+|+| |||+.++++++|+.||..| .+++.++.-
T Consensus 261 VNlaDsNGNTAL--------HYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnV 332 (452)
T KOG0514|consen 261 VNLADSNGNTAL--------HYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDV 332 (452)
T ss_pred hhhhcCCCCeee--------eeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCc
Confidence 688899999999 9999999999999999977 467766554
Q ss_pred -------CCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhc-cCCCCCCCcccccccc
Q 008477 66 -------DSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAY-EARPPPLGPLQAALRD 134 (564)
Q Consensus 66 -------g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~-~~~~~~~~~~~~g~t~ 134 (564)
|+|+|++|+.+|+.++|+.||..|||+|++|.+|-| ++.||. +.+|+++|+.. +++....+ .+|.|+
T Consensus 333 NaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD--~DgSTA 410 (452)
T KOG0514|consen 333 NAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTD--VDGSTA 410 (452)
T ss_pred chhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeec--CCCchh
Confidence 567777788888999999999999999999999988 777777 88899888865 67777755 788999
Q ss_pred chhccccccc
Q 008477 135 TFLGCGANRQ 144 (564)
Q Consensus 135 lh~A~~~~~~ 144 (564)
|.+|-+.+|.
T Consensus 411 l~IAleagh~ 420 (452)
T KOG0514|consen 411 LSIALEAGHR 420 (452)
T ss_pred hhhHHhcCch
Confidence 9888888874
No 70
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.39 E-value=7.1e-13 Score=120.04 Aligned_cols=98 Identities=16% Similarity=0.201 Sum_probs=87.8
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHhcCCHH---HHHHHHHcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHh-CCCCC
Q 008477 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVD---RLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLE-SGAIC 92 (564)
Q Consensus 18 v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~---~v~~Ll~~g~~~n~~d-~~g~TpL~~A~~~g~~~~v~~Ll~-~ga~~ 92 (564)
++.+|..|.||| |+|+..|+.+ +++.|++.|+++|.+| ..|+||||+|+..|+.+++++|+. .|+++
T Consensus 48 ~~~~d~~g~t~L--------h~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~ 119 (154)
T PHA02736 48 VLEYNRHGKQCV--------HIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNM 119 (154)
T ss_pred HHHhcCCCCEEE--------EeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 345688999999 9999999874 6889999999999998 599999999999999999999997 59999
Q ss_pred CCccCCCCc-hHHHHc--hHHHHHHHHhccCCCC
Q 008477 93 SEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPP 123 (564)
Q Consensus 93 ~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~ 123 (564)
+..|..|.| +|+|+. +.+++++|+.+|++.+
T Consensus 120 n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 120 EILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred ccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999998 788887 7899999999998764
No 71
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.39 E-value=3e-12 Score=135.46 Aligned_cols=187 Identities=17% Similarity=0.190 Sum_probs=125.5
Q ss_pred chhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHH
Q 008477 5 RQSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAAR 83 (564)
Q Consensus 5 ~~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~ 83 (564)
+-..++..+. |++.+..+..+.+|+ |+|+..|+.+.++.|+++|+|+|..|..|.||||+||..++.+..+
T Consensus 100 ~~~~i~~Lls~gad~~~~n~~~~apl--------h~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k 171 (929)
T KOG0510|consen 100 QGDKIQVLLSYGADTPLRNLNKNAPL--------HLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKK 171 (929)
T ss_pred hHHHHHHHHhcCCCCChhhhhccCch--------hhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHH
Confidence 3345555565 888888888888888 8888888888888888888888888888888888888888888777
Q ss_pred HHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHh-----ccCCCCCCCccccccccchhccccccc-----hhhhhH
Q 008477 84 MLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKA-----YEARPPPLGPLQAALRDTFLGCGANRQ-----FLEEAE 150 (564)
Q Consensus 84 ~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~-----~~~~~~~~~~~~~g~t~lh~A~~~~~~-----~l~~~~ 150 (564)
.|++.|+++...|..|+. +|.|+. ..+..++++. .+..++-.+ ..|.||||.|++.++. +|++..
T Consensus 172 ~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~--n~~~~pLhlAve~g~~e~lk~~L~n~~ 249 (929)
T KOG0510|consen 172 ELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDN--NEKATPLHLAVEGGDIEMLKMCLQNGK 249 (929)
T ss_pred HHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhccccccc--CCCCcchhhhhhcCCHHHHHHHHhCcc
Confidence 888888888888887776 577777 6677777666 344444444 5677777777777763 122110
Q ss_pred Hh------hc--cccccc---------------CCCCC----CCCCCCCeEEEecCeeechhhHhhcccChhHHHhcc
Q 008477 151 VV------LG--ISGVTS---------------NGASN----SDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFE 201 (564)
Q Consensus 151 ~~------~~--~~~l~~---------------~~~~~----~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~l~~ 201 (564)
-. .+ .-.+.. +|... --+...|+..+-.++.-+.|.+..-.|-.-.++++.
T Consensus 250 ~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~ 327 (929)
T KOG0510|consen 250 KIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQ 327 (929)
T ss_pred ccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHh
Confidence 00 00 000110 11000 003455777777778889999988888777888886
No 72
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.38 E-value=1.2e-12 Score=146.51 Aligned_cols=132 Identities=21% Similarity=0.172 Sum_probs=111.8
Q ss_pred CCCCCCCCCCCCCCCCC-------------------------CCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcH
Q 008477 15 EIDLDASDFSSSVPLKK-------------------------VPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVA 69 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~-------------------------~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~Tp 69 (564)
|+++|.....|.|||+- ...+.+|.|...++...++.++++|++++.++.+|.||
T Consensus 464 g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~Tp 543 (1143)
T KOG4177|consen 464 GADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTP 543 (1143)
T ss_pred CCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccch
Confidence 77777777777777741 13344577777777778888888899999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccchh
Q 008477 70 LYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFL 146 (564)
Q Consensus 70 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~l 146 (564)
||.||..|++++|++||++|||++.+++.|.| +|.||. +.+++.+|+++|+.++..+ .+|.||||+|...++-..
T Consensus 544 Lh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d--~~g~TpL~iA~~lg~~~~ 621 (1143)
T KOG4177|consen 544 LHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAAD--LDGFTPLHIAVRLGYLSV 621 (1143)
T ss_pred HHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCccc--ccCcchhHHHHHhcccch
Confidence 99999999999999999999999999999997 799998 8999999999999999977 889999999999888543
Q ss_pred hh
Q 008477 147 EE 148 (564)
Q Consensus 147 ~~ 148 (564)
..
T Consensus 622 ~k 623 (1143)
T KOG4177|consen 622 VK 623 (1143)
T ss_pred hh
Confidence 33
No 73
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.37 E-value=8.7e-13 Score=147.75 Aligned_cols=119 Identities=31% Similarity=0.389 Sum_probs=105.0
Q ss_pred HhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 008477 10 DAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES 88 (564)
Q Consensus 10 ~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ 88 (564)
...++ |++++.++..|.||| |.||..|++.+|++|+++|++++.+|+.|+||||.||..|+.+|+.+|+++
T Consensus 524 ~~l~~~ga~v~~~~~r~~TpL--------h~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~ 595 (1143)
T KOG4177|consen 524 KILLEHGANVDLRTGRGYTPL--------HVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKH 595 (1143)
T ss_pred HHHhhcCCceehhcccccchH--------HHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHc
Confidence 34455 999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCC-----CCCCccccccccchhc
Q 008477 89 GAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARP-----PPLGPLQAALRDTFLG 138 (564)
Q Consensus 89 ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~-----~~~~~~~~g~t~lh~A 138 (564)
||++|..|.+|.| +|.|+. +.+++++|+..+..+ ...+ ..|.+|.-++
T Consensus 596 GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~--~~g~~p~~v~ 651 (1143)
T KOG4177|consen 596 GASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKEN--RKGAVPEDVA 651 (1143)
T ss_pred CCCCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhh--hcccChhhHH
Confidence 9999999999998 788888 889999999988873 2222 4567776443
No 74
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.37 E-value=1.2e-12 Score=118.15 Aligned_cols=118 Identities=18% Similarity=0.147 Sum_probs=104.1
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (564)
|+..|..+-.+++|+ .+++...+++.+..+.. .-+|.+|..|.|||.||+..|++++|++||+.|||+++
T Consensus 119 ~~rgnevs~~p~s~~--------slsVhql~L~~~~~~~~--n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~ 188 (296)
T KOG0502|consen 119 GARGNEVSLMPWSPL--------SLSVHQLHLDVVDLLVN--NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDA 188 (296)
T ss_pred cccCCccccccCChh--------hHHHHHHHHHHHHHHhh--ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhh
Confidence 788888888999999 99998888877766554 35899999999999999999999999999999999998
Q ss_pred ccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 95 ~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
..+...+ +..|+. ..+|+++|+..+.+++..+ -+|-|||-+|+..+|.
T Consensus 189 lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyD--wNGgTpLlyAvrgnhv 239 (296)
T KOG0502|consen 189 LGKYRESALSLATRGGYTDIVELLLTREVDVNVYD--WNGGTPLLYAVRGNHV 239 (296)
T ss_pred hhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceec--cCCCceeeeeecCChH
Confidence 8887776 777777 8999999999999999866 8899999999998884
No 75
>PHA02795 ankyrin-like protein; Provisional
Probab=99.37 E-value=2.1e-12 Score=133.09 Aligned_cols=119 Identities=12% Similarity=-0.009 Sum_probs=100.8
Q ss_pred CCCCC------CCCCCCCCCCCCCCChhHHHHHh--cCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 008477 15 EIDLD------ASDFSSSVPLKKVPNGDVFEASR--AGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (564)
Q Consensus 15 g~~v~------~~d~~g~tpL~~~~~~~l~~Aa~--~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll 86 (564)
|+++| .++..++|+| |+|+. .|+.+++++|+.+||+++.. ++.||||+|+..|+.+++++|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~L--------~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Ll 169 (437)
T PHA02795 100 NYMEDIFSIIIKNCNSVQDLL--------LYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFIL 169 (437)
T ss_pred ccccchhhhhhhccccccHHH--------HHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHH
Confidence 78877 7888889999 99998 89999999999999999985 4589999999999999999999
Q ss_pred hCCCCCCCcc------CCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccch
Q 008477 87 ESGAICSEHT------FDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQF 145 (564)
Q Consensus 87 ~~ga~~~~~d------~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~ 145 (564)
.+|++..-.. ..|.+ .|.++. +.+++++|+.+|++++..+ ..|.||||.|+..++..
T Consensus 170 s~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD--~~G~TpLh~Aa~~g~~e 235 (437)
T PHA02795 170 NCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLD--AGGRTLLYRAIYAGYID 235 (437)
T ss_pred hcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCC--CCCCCHHHHHHHcCCHH
Confidence 9998543221 23445 455555 6899999999999999877 88999999999988853
No 76
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.37 E-value=1.7e-12 Score=105.83 Aligned_cols=80 Identities=26% Similarity=0.468 Sum_probs=69.2
Q ss_pred chhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHH
Q 008477 5 RQSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAAR 83 (564)
Q Consensus 5 ~~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~ 83 (564)
....+...++ +.+++. |.||| |+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.++++
T Consensus 9 ~~~~~~~ll~~~~~~~~----~~~~l--------~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 9 NLEILKFLLEKGADINL----GNTAL--------HYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp THHHHHHHHHTTSTTTS----SSBHH--------HHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHHHHHCcCCCCC----CCCHH--------HHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 3455666665 666765 88999 9999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCcc
Q 008477 84 MLLESGAICSEHT 96 (564)
Q Consensus 84 ~Ll~~ga~~~~~d 96 (564)
+|+++|++++.+|
T Consensus 77 ~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 77 LLLEHGADVNIRN 89 (89)
T ss_dssp HHHHTTT-TTSS-
T ss_pred HHHHcCCCCCCcC
Confidence 9999999999875
No 77
>PHA02730 ankyrin-like protein; Provisional
Probab=99.36 E-value=2.2e-12 Score=139.16 Aligned_cols=124 Identities=15% Similarity=0.160 Sum_probs=103.8
Q ss_pred hhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCC----HHHHHHHHHcCC--CccccCCCCCcHHHH---HHHc
Q 008477 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGD----VDRLRYILESGV--NVNARDQWDSVALYY---ACLA 76 (564)
Q Consensus 7 ~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~----~~~v~~Ll~~g~--~~n~~d~~g~TpL~~---A~~~ 76 (564)
.+++-.++ |+++|.. ..|.||| |+|+..++ .+++++|+++|+ ++|.+|..|.||||. |...
T Consensus 360 eIvelLIs~GAdIN~k-~~G~TpL--------H~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~ 430 (672)
T PHA02730 360 PILRCMLDNGATMDKT-TDNNYPL--------HDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFN 430 (672)
T ss_pred HHHHHHHHCCCCCCcC-CCCCcHH--------HHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhc
Confidence 33444454 9999985 7999999 99998875 899999999997 699999999999984 3323
Q ss_pred C---------CHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccc-cccccchhcccc
Q 008477 77 G---------HLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQ-AALRDTFLGCGA 141 (564)
Q Consensus 77 g---------~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~-~g~t~lh~A~~~ 141 (564)
+ ..+++++|+.+||+++.+|..|.| +|+|+. +.+++++|+.+|++++..+ . .|.||+|.|+..
T Consensus 431 n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d--~~~g~TaL~~Aa~~ 506 (672)
T PHA02730 431 NCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTS--RSIINTAIQKSSYR 506 (672)
T ss_pred cccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCC--CcCCcCHHHHHHHh
Confidence 2 235799999999999999999998 788888 7899999999999998876 4 489999998763
No 78
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac. Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.
Probab=99.36 E-value=2.2e-12 Score=104.65 Aligned_cols=87 Identities=23% Similarity=0.501 Sum_probs=77.7
Q ss_pred CeEEEecCeeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHccCCccCCcccHHHHHHHHhHh
Q 008477 172 DVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKICKVC 251 (564)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~a~~c 251 (564)
||++.++|+.+++||.+|+++|+||+.||.+.+.+.....+.++++++++|+.+++|+|++.+.++..++..++.+|+.+
T Consensus 1 dv~i~v~~~~~~~h~~iL~~~s~~f~~~~~~~~~~~~~~~i~l~~~~~~~f~~~l~~ly~~~~~~~~~~~~~l~~~a~~~ 80 (90)
T smart00225 1 DVTLVVGGKKFKAHKAVLAACSPYFKALFSGDFKESKKSEIYLDDVSPEDFRALLEFLYTGKLDLPEENVEELLELADYL 80 (90)
T ss_pred CeEEEECCEEEehHHHHHhhcCHHHHHHHcCCCccCCCCEEEecCCCHHHHHHHHHeecCceeecCHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999988877777889999999999999999999999998888888888888777
Q ss_pred cHHHHHH
Q 008477 252 KCESLQR 258 (564)
Q Consensus 252 ~~~~L~~ 258 (564)
+++.+..
T Consensus 81 ~~~~l~~ 87 (90)
T smart00225 81 QIPGLVE 87 (90)
T ss_pred CcHHHHh
Confidence 6655544
No 79
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.32 E-value=4.3e-12 Score=129.00 Aligned_cols=128 Identities=20% Similarity=0.188 Sum_probs=109.7
Q ss_pred HHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 008477 9 IDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE 87 (564)
Q Consensus 9 l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~ 87 (564)
+...+. |+++|..+.+|.|+| |-+|...+.++|++|+++|++||..|..||||||.|+.+||..++++|+.
T Consensus 56 v~~ll~~ga~~~~~n~DglTal--------hq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~ 127 (527)
T KOG0505|consen 56 VRKLLNRGASPNLCNVDGLTAL--------HQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQ 127 (527)
T ss_pred HHHHhccCCCccccCCccchhH--------HHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHH
Confidence 344554 788899999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCC-----------------------------------------------------------Cc-hHHHHc
Q 008477 88 SGAICSEHTFDG-----------------------------------------------------------DR-CHYAAL 107 (564)
Q Consensus 88 ~ga~~~~~d~~g-----------------------------------------------------------~t-l~~aa~ 107 (564)
+||++...|..| .| +|.|+.
T Consensus 128 ~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa 207 (527)
T KOG0505|consen 128 HGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAA 207 (527)
T ss_pred hhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHh
Confidence 998865553332 34 666666
Q ss_pred --hHHHHHHHHhccCCCCCCCccccccccchhccccccchh
Q 008477 108 --NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFL 146 (564)
Q Consensus 108 --~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~l 146 (564)
..++..+|+.+|.+++..+ .+|+||||.|+-=++.-+
T Consensus 208 ~Gy~e~~~lLl~ag~~~~~~D--~dgWtPlHAAA~Wg~~~~ 246 (527)
T KOG0505|consen 208 NGYTEVAALLLQAGYSVNIKD--YDGWTPLHAAAHWGQEDA 246 (527)
T ss_pred hhHHHHHHHHHHhccCccccc--ccCCCcccHHHHhhhHhH
Confidence 7889999999999999988 899999999887666433
No 80
>PHA02730 ankyrin-like protein; Provisional
Probab=99.32 E-value=5.3e-12 Score=136.27 Aligned_cols=128 Identities=17% Similarity=0.105 Sum_probs=102.4
Q ss_pred HhhcCCC-CCC-CCCCCCCCCCCCCCChhHHHHHhcC---CHHHHHHHHHcCCCccccCCCCCcHHHHHHHcC--CHHHH
Q 008477 10 DAELDEI-DLD-ASDFSSSVPLKKVPNGDVFEASRAG---DVDRLRYILESGVNVNARDQWDSVALYYACLAG--HLDAA 82 (564)
Q Consensus 10 ~~~~~g~-~v~-~~d~~g~tpL~~~~~~~l~~Aa~~g---~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g--~~~~v 82 (564)
...+... ++| .+|..|+||| |+|+..| +.++++.|+++||+++.+|..|+||||+|+..+ +.+++
T Consensus 24 ~~~~~~~~~in~~kd~~G~TaL--------h~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv 95 (672)
T PHA02730 24 KLEIETCHNLSKHIDRRGNNAL--------HCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIV 95 (672)
T ss_pred HHHHHHhcchhhhcCCCCCcHH--------HHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHH
Confidence 3444433 787 7899999999 9999987 599999999999999999999999999999976 79999
Q ss_pred HHHHhCCCC--CCCccCCCCc-hHHHHc----hHHHHHHHHh-ccCCCCCCCcc---ccccccchhccccccch
Q 008477 83 RMLLESGAI--CSEHTFDGDR-CHYAAL----NLKVRKLLKA-YEARPPPLGPL---QAALRDTFLGCGANRQF 145 (564)
Q Consensus 83 ~~Ll~~ga~--~~~~d~~g~t-l~~aa~----~~~i~~lLl~-~~~~~~~~~~~---~~g~t~lh~A~~~~~~~ 145 (564)
++|++.|++ ++..+..+.+ +|.++. +.+++++|+. .+.+++....- ..|.+|+++|...++..
T Consensus 96 ~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~e 169 (672)
T PHA02730 96 HLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPE 169 (672)
T ss_pred HHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchH
Confidence 999999664 4766655654 555444 6789999996 66777764311 26899999999988853
No 81
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown]
Probab=99.31 E-value=1.3e-11 Score=123.88 Aligned_cols=133 Identities=19% Similarity=0.220 Sum_probs=113.8
Q ss_pred CCCCCeEEEecC-----eeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHccCCccCCcccHH
Q 008477 168 SFPPDVVFYVQG-----RPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDME 242 (564)
Q Consensus 168 ~~~~Dv~~~v~~-----~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~ 242 (564)
+..+|+.|++++ +++|+||.+|+..|.+|.+||.+++.+....+|.++++.+.+|..+|+|+|++++.+..+++.
T Consensus 112 ~~~adv~fivg~~~~~~q~~paHk~vla~gS~VFdaMf~g~~a~~~s~ei~lpdvepaaFl~~L~flYsdev~~~~dtvi 191 (521)
T KOG2075|consen 112 ELLADVHFIVGEEDGGSQRIPAHKLVLADGSDVFDAMFYGGLAEDASLEIRLPDVEPAAFLAFLRFLYSDEVKLAADTVI 191 (521)
T ss_pred cccceeEEEeccCCCcccccchhhhhhhcchHHHHHHhccCcccccCceeecCCcChhHhHHHHHHHhcchhhhhHHHHH
Confidence 455699999973 789999999999999999999999999878899999999999999999999999999999999
Q ss_pred HHHHHH---------hHhcHHHHHHHHH--H-HHHHHHHHHHcCcHHHHHHHHHHHhhcCC--CCCCCccchh
Q 008477 243 DLVKIC---------KVCKCESLQRIIE--K-ELIHQKYAEYKALRDVDNSQKRFILQGSA--LPEEDRLPAA 301 (564)
Q Consensus 243 ~ll~~a---------~~c~~~~L~~~l~--~-~l~~~~~a~~~~~~~L~~~~~~~i~~~~~--v~~~~~l~~~ 301 (564)
.++.+| +.| .++++..+- + ++.+..-|..+.-++|...|.+-|...+. +..+.|...+
T Consensus 192 ~tl~~AkKY~VpaLer~C-Vkflr~~l~~~naf~~L~q~A~lf~ep~Li~~c~e~id~~~~~al~~EGf~did 263 (521)
T KOG2075|consen 192 TTLYAAKKYLVPALERQC-VKFLRKNLMADNAFLELFQRAKLFDEPSLISICLEVIDKSFEDALTPEGFCDID 263 (521)
T ss_pred HHHHHHHHhhhHHHHHHH-HHHHHHhcCChHHHHHHHHHHHhhcCHHHHHHHHHHhhhHHHhhhCccceeehh
Confidence 999999 456 666666554 2 45555558999999999999999999888 4666665444
No 82
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.31 E-value=6.6e-12 Score=97.87 Aligned_cols=98 Identities=21% Similarity=0.162 Sum_probs=87.1
Q ss_pred hHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCchHH-HHc--hHHHH
Q 008477 36 DVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHY-AAL--NLKVR 112 (564)
Q Consensus 36 ~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tl~~-aa~--~~~i~ 112 (564)
.+.|+..+|.++.|+..+..|.++|..- .|++|||+|+.+|+.++.++|+..||+++.+|+.|-||.. |++ +.+.+
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 4589999999999999999998888766 8999999999999999999999999999999999998555 444 89999
Q ss_pred HHHHhccCCCCCCCccccccccch
Q 008477 113 KLLKAYEARPPPLGPLQAALRDTF 136 (564)
Q Consensus 113 ~lLl~~~~~~~~~~~~~~g~t~lh 136 (564)
++|+..|++..... ++|.+.+-
T Consensus 84 klLL~~GAdrt~~~--PdG~~~~e 105 (117)
T KOG4214|consen 84 KLLLQNGADRTIHA--PDGTALIE 105 (117)
T ss_pred HHHHHcCcccceeC--CCchhHHh
Confidence 99999999988866 67776664
No 83
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.29 E-value=1.1e-11 Score=141.63 Aligned_cols=144 Identities=15% Similarity=0.109 Sum_probs=112.7
Q ss_pred HHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHH
Q 008477 38 FEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKL 114 (564)
Q Consensus 38 ~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~l 114 (564)
|.||..|+.++++.|++.|+++|..|..|+||||+|+..|+.+++++|+++|++++.+|.+|.| +|.|+. +.+++++
T Consensus 530 ~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~ 609 (823)
T PLN03192 530 LTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRI 609 (823)
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998 788888 8999999
Q ss_pred HHhccCCCCCCCccccccccchhccccccchhhhhHHhhcccccccCCCCCCCCCCCCeEEEecCeeechhhHhhcccCh
Q 008477 115 LKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSV 194 (564)
Q Consensus 115 Ll~~~~~~~~~~~~~~g~t~lh~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~ 194 (564)
|+..+...+. ..+.++||.|+..++....+... +.+ .|+...-..+.-+.|-++-..+..
T Consensus 610 L~~~~~~~~~----~~~~~~L~~Aa~~g~~~~v~~Ll--------~~G--------adin~~d~~G~TpLh~A~~~g~~~ 669 (823)
T PLN03192 610 LYHFASISDP----HAAGDLLCTAAKRNDLTAMKELL--------KQG--------LNVDSEDHQGATALQVAMAEDHVD 669 (823)
T ss_pred HHhcCcccCc----ccCchHHHHHHHhCCHHHHHHHH--------HCC--------CCCCCCCCCCCCHHHHHHHCCcHH
Confidence 9988776554 34779999999988853333222 111 133333334556677766555544
Q ss_pred hHHHhcc
Q 008477 195 FFRRKFE 201 (564)
Q Consensus 195 ~f~~l~~ 201 (564)
..+-++.
T Consensus 670 iv~~Ll~ 676 (823)
T PLN03192 670 MVRLLIM 676 (823)
T ss_pred HHHHHHH
Confidence 4444443
No 84
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.27 E-value=3.8e-11 Score=103.51 Aligned_cols=114 Identities=32% Similarity=0.408 Sum_probs=102.4
Q ss_pred CCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCC
Q 008477 20 ASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDG 99 (564)
Q Consensus 20 ~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 99 (564)
.+|..|.||| |+|+..|+.++++.|+..|.+.+..+..|.||||+|+..+..+++++|+..|++++..+..|
T Consensus 2 ~~~~~g~t~l--------~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 73 (126)
T cd00204 2 ARDEDGRTPL--------HLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDG 73 (126)
T ss_pred CcCcCCCCHH--------HHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 3567899999 99999999999999999999999999999999999999999999999999999999888888
Q ss_pred Cc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhcccccc
Q 008477 100 DR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (564)
Q Consensus 100 ~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~ 143 (564)
.+ +|.|+. +.+++++|+..+.+.+..+ ..|.||++.|...++
T Consensus 74 ~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~--~~~~~~l~~~~~~~~ 118 (126)
T cd00204 74 NTPLHLAARNGNLDVVKLLLKHGADVNARD--KDGRTPLHLAAKNGH 118 (126)
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCCcccC--CCCCCHHHHHHhcCC
Confidence 87 677777 7899999999987777766 778999999887654
No 85
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.26 E-value=7.1e-12 Score=91.63 Aligned_cols=54 Identities=33% Similarity=0.620 Sum_probs=45.7
Q ss_pred CCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 008477 25 SSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (564)
Q Consensus 25 g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll 86 (564)
|+||+ |+|+..|+.+++++|+++|+++|.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~l--------h~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPL--------HWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHH--------HHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHH--------HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 56777 9999999999999999999999999999999999999999999999986
No 86
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.23 E-value=2.1e-11 Score=129.84 Aligned_cols=113 Identities=21% Similarity=0.304 Sum_probs=100.3
Q ss_pred CCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCcccc---------CC--------------CCCcHHHHHHHcCC
Q 008477 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR---------DQ--------------WDSVALYYACLAGH 78 (564)
Q Consensus 22 d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~---------d~--------------~g~TpL~~A~~~g~ 78 (564)
...|.||| |.|+.+.+.+.|++|++.||||+++ |. .|..||-+||..++
T Consensus 181 eY~GqSaL--------HiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq 252 (782)
T KOG3676|consen 181 EYYGQSAL--------HIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQ 252 (782)
T ss_pred hhcCcchH--------HHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCC
Confidence 45788888 9999999999999999999999864 21 47899999999999
Q ss_pred HHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCC--CCCCCccccccccchhccccccc
Q 008477 79 LDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEAR--PPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 79 ~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~--~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
.+|+++|+++|||++.+|.+|+| +|..+. ..++.++++.+|++ ....| ..|.|||-+|+..++.
T Consensus 253 ~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N--~qgLTPLtLAaklGk~ 321 (782)
T KOG3676|consen 253 PEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRN--NQGLTPLTLAAKLGKK 321 (782)
T ss_pred HHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccc--cCCCChHHHHHHhhhH
Confidence 99999999999999999999999 676666 78899999999999 66666 7899999999998883
No 87
>PHA02792 ankyrin-like protein; Provisional
Probab=99.19 E-value=5.9e-11 Score=126.94 Aligned_cols=122 Identities=15% Similarity=0.046 Sum_probs=101.4
Q ss_pred hhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCC--CcHHHHHHHcCCHH---
Q 008477 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWD--SVALYYACLAGHLD--- 80 (564)
Q Consensus 7 ~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g--~TpL~~A~~~g~~~--- 80 (564)
.+++-.++ |++++. ..+..++ +.||..|+.+++++|+++|+++|.+|..| .||||+|+..+..+
T Consensus 322 eiIK~LId~Ga~~~r--~~~~n~~--------~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~ 391 (631)
T PHA02792 322 NVIKCMIDEGATLYR--FKHINKY--------FQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLS 391 (631)
T ss_pred HHHHHHHHCCCcccc--CCcchHH--------HHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHH
Confidence 45556666 777651 1133344 99999999999999999999999999775 69999987766544
Q ss_pred HHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccc
Q 008477 81 AARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (564)
Q Consensus 81 ~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~ 140 (564)
++++|+++||+++.+|..|.| +|+|+. +.+++++|+++|++++..+ ..|.||+|+|+.
T Consensus 392 IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD--~~G~TpL~~A~~ 452 (631)
T PHA02792 392 ILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITT--KYGSTCIGICVI 452 (631)
T ss_pred HHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcC--CCCCCHHHHHHH
Confidence 578889999999999999997 788887 8899999999999999877 889999999875
No 88
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.19 E-value=5e-11 Score=121.40 Aligned_cols=127 Identities=20% Similarity=0.231 Sum_probs=109.4
Q ss_pred hhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCC---------------------
Q 008477 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ--------------------- 64 (564)
Q Consensus 7 ~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~--------------------- 64 (564)
..+...++ |++||..|..||||| |.|+..||..++++|+.+|+++-..+.
T Consensus 87 e~v~~l~e~ga~Vn~~d~e~wtPl--------haaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~ 158 (527)
T KOG0505|consen 87 EMVKFLVENGANVNAQDNEGWTPL--------HAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETE 158 (527)
T ss_pred HHHHHHHHhcCCccccccccCCcc--------hhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHH
Confidence 34455556 999999999999999 999999999999999999877533321
Q ss_pred --------------------------------------CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHH
Q 008477 65 --------------------------------------WDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYA 105 (564)
Q Consensus 65 --------------------------------------~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~a 105 (564)
.|.|+||.|+..|..++.++|+++|.+++++|.+|++ +|.|
T Consensus 159 ~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAA 238 (527)
T KOG0505|consen 159 MARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAA 238 (527)
T ss_pred HHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHH
Confidence 1679999999999999999999999999999999997 6777
Q ss_pred Hc--hHHHHHHHHhccCCCCCCCccccccccchhcccccc
Q 008477 106 AL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (564)
Q Consensus 106 a~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~ 143 (564)
|. ..++.++|..+|++.+... ..|.||+-+|..+..
T Consensus 239 A~Wg~~~~~elL~~~ga~~d~~t--~~g~~p~dv~dee~~ 276 (527)
T KOG0505|consen 239 AHWGQEDACELLVEHGADMDAKT--KMGETPLDVADEEEL 276 (527)
T ss_pred HHhhhHhHHHHHHHhhcccchhh--hcCCCCccchhhhhH
Confidence 76 8899999999999999877 889999988776544
No 89
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.16 E-value=5.9e-11 Score=115.02 Aligned_cols=111 Identities=26% Similarity=0.326 Sum_probs=92.1
Q ss_pred hHHhhcC--CCCCCCCCCCCCCCCC------------------------------CCCChhHHHHHhcCCHHHHHHHHHc
Q 008477 8 TIDAELD--EIDLDASDFSSSVPLK------------------------------KVPNGDVFEASRAGDVDRLRYILES 55 (564)
Q Consensus 8 ~l~~~~~--g~~v~~~d~~g~tpL~------------------------------~~~~~~l~~Aa~~g~~~~v~~Ll~~ 55 (564)
.+.+.+| -++||.++..|+||+= ..+.+.|++|+.+|..++|+.||..
T Consensus 283 VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLac 362 (452)
T KOG0514|consen 283 VVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALLAC 362 (452)
T ss_pred HHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHHHc
Confidence 4455556 3778888888888742 1366678999999999999999999
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCccCCCCchHHHHc---hHHHHHHHHhc
Q 008477 56 GVNVNARDQWDSVALYYACLAGHLDAARMLLES-GAICSEHTFDGDRCHYAAL---NLKVRKLLKAY 118 (564)
Q Consensus 56 g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tl~~aa~---~~~i~~lLl~~ 118 (564)
|+|+|.+|.+|.|+|+.||.+||.+++++||.. ++|+...|.+|-|.+..|+ +.+|.-+|..+
T Consensus 363 gAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 363 GADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred cCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 999999999999999999999999999999965 7999999999999555555 77877666543
No 90
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.16 E-value=3.1e-11 Score=88.78 Aligned_cols=54 Identities=39% Similarity=0.647 Sum_probs=31.3
Q ss_pred HHHcC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHH
Q 008477 52 ILESG-VNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYA 105 (564)
Q Consensus 52 Ll~~g-~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~a 105 (564)
|+++| +++|.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.| +|+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56777 889999999999999999999999999999999999999999998 5554
No 91
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.16 E-value=6.4e-11 Score=134.44 Aligned_cols=113 Identities=18% Similarity=0.132 Sum_probs=94.6
Q ss_pred CCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccC--------------CCCCcHHHHHHHcCCHHHHHHHHh
Q 008477 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD--------------QWDSVALYYACLAGHLDAARMLLE 87 (564)
Q Consensus 22 d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d--------------~~g~TpL~~A~~~g~~~~v~~Ll~ 87 (564)
+..|.||| |+||..|+.++++.|+++|++++.++ ..|.||||+|+..|+.+++++|++
T Consensus 125 ~~~G~TpL--------hlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~ 196 (743)
T TIGR00870 125 FTPGITAL--------HLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSE 196 (743)
T ss_pred cCCCCcHH--------HHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhc
Confidence 35689999 99999999999999999999998653 358999999999999999999999
Q ss_pred CCCCCCCccCCCCc-hHHHHchH-----------HHHHHHHhccCCC-------CCCCccccccccchhccccccc
Q 008477 88 SGAICSEHTFDGDR-CHYAALNL-----------KVRKLLKAYEARP-------PPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 88 ~ga~~~~~d~~g~t-l~~aa~~~-----------~i~~lLl~~~~~~-------~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
+|+|++.+|..|+| +|.|+... .+.++++..+... ...+ ..|.||+|+|+..++.
T Consensus 197 ~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N--~~g~TPL~~A~~~g~~ 270 (743)
T TIGR00870 197 DPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILN--HQGLTPLKLAAKEGRI 270 (743)
T ss_pred CCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcC--CCCCCchhhhhhcCCc
Confidence 99999999999998 78777732 3556666655543 2334 6799999999998885
No 92
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.15 E-value=1.1e-10 Score=109.60 Aligned_cols=104 Identities=21% Similarity=0.267 Sum_probs=93.2
Q ss_pred hcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 008477 12 ELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGA 90 (564)
Q Consensus 12 ~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga 90 (564)
.+. |+.+|..+...-||| |+|+..||.++|..|+++.+|+|+.+..|.|||||||..|.-.+++-|+..||
T Consensus 53 ll~rgarvn~tnmgddtpl--------hlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga 124 (448)
T KOG0195|consen 53 LLSRGARVNSTNMGDDTPL--------HLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGA 124 (448)
T ss_pred HHhcccccccccCCCCcch--------hhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccc
Confidence 344 999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCchHHHHc---hHHHHHHHHhccCCCC
Q 008477 91 ICSEHTFDGDRCHYAAL---NLKVRKLLKAYEARPP 123 (564)
Q Consensus 91 ~~~~~d~~g~tl~~aa~---~~~i~~lLl~~~~~~~ 123 (564)
.+++.++.|.|+..-|. ...+.++-.++|..++
T Consensus 125 ~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~n 160 (448)
T KOG0195|consen 125 AVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN 160 (448)
T ss_pred eeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence 99999999999777666 4555666666776655
No 93
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.13 E-value=3.3e-11 Score=88.64 Aligned_cols=50 Identities=34% Similarity=0.512 Sum_probs=33.6
Q ss_pred CCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHH
Q 008477 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYA 73 (564)
Q Consensus 16 ~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A 73 (564)
.++|.+|..|.||| |+||..|+.+++++|++.|++++.+|..|+||||+|
T Consensus 7 ~~~n~~d~~G~T~L--------H~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKYGNTPL--------HWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp --TT---TTS--HH--------HHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCCcCcCCCCCcHH--------HHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 88999999999999 999999999999999999999999999999999987
No 94
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.13 E-value=9.9e-11 Score=132.91 Aligned_cols=118 Identities=19% Similarity=0.182 Sum_probs=96.4
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHH-HHHhcCCHHHHHHHHHcCCC-----------------------------------
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVF-EASRAGDVDRLRYILESGVN----------------------------------- 58 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~-~Aa~~g~~~~v~~Ll~~g~~----------------------------------- 58 (564)
+.++|..|..|.||| | .|+.+++.++++.|++.|+.
T Consensus 42 ~~~in~~d~~G~t~L--------h~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~ 113 (743)
T TIGR00870 42 KLNINCPDRLGRSAL--------FVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGP 113 (743)
T ss_pred ccCCCCcCccchhHH--------HHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCc
Confidence 688999999999999 8 77777777787777776620
Q ss_pred ---ccc----cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcc--------------CCCCc-hHHHHc--hHHHHHH
Q 008477 59 ---VNA----RDQWDSVALYYACLAGHLDAARMLLESGAICSEHT--------------FDGDR-CHYAAL--NLKVRKL 114 (564)
Q Consensus 59 ---~n~----~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d--------------~~g~t-l~~aa~--~~~i~~l 114 (564)
++. .+..|.||||+|+..|+.+++++|+++||+++.++ ..|.+ +|.|+. +.+++++
T Consensus 114 ~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~l 193 (743)
T TIGR00870 114 LELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVAL 193 (743)
T ss_pred hhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHH
Confidence 000 12359999999999999999999999999999653 24665 788777 8999999
Q ss_pred HHhccCCCCCCCccccccccchhccccc
Q 008477 115 LKAYEARPPPLGPLQAALRDTFLGCGAN 142 (564)
Q Consensus 115 Ll~~~~~~~~~~~~~~g~t~lh~A~~~~ 142 (564)
|+++|++++..+ ..|+||+|+|+.++
T Consensus 194 Ll~~gadin~~d--~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 194 LSEDPADILTAD--SLGNTLLHLLVMEN 219 (743)
T ss_pred HhcCCcchhhHh--hhhhHHHHHHHhhh
Confidence 999999888866 78999999999876
No 95
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.10 E-value=3.5e-10 Score=125.71 Aligned_cols=101 Identities=27% Similarity=0.295 Sum_probs=89.5
Q ss_pred hhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHH
Q 008477 35 GDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKV 111 (564)
Q Consensus 35 ~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i 111 (564)
..|+.|+..|+.+.++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++..|..|.| +|+|+. +.++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 3578999999999999999999999999999999999999999999999999999999999999998 788887 8899
Q ss_pred HHHHHhc-------cCCCCCCCccccccccchh
Q 008477 112 RKLLKAY-------EARPPPLGPLQAALRDTFL 137 (564)
Q Consensus 112 ~~lLl~~-------~~~~~~~~~~~~g~t~lh~ 137 (564)
+++|+.+ |++.++.+ ..|.+|+..
T Consensus 164 v~~Ll~~~~~~~~~ga~~~~~~--~~g~~~~~~ 194 (664)
T PTZ00322 164 VQLLSRHSQCHFELGANAKPDS--FTGKPPSLE 194 (664)
T ss_pred HHHHHhCCCcccccCCCCCccc--cCCCCccch
Confidence 9999998 66666544 556666643
No 96
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.09 E-value=7.2e-10 Score=106.12 Aligned_cols=125 Identities=30% Similarity=0.419 Sum_probs=109.1
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCC-----HHHHHHHHhCC
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH-----LDAARMLLESG 89 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~-----~~~v~~Ll~~g 89 (564)
....+..+..+.+++ |.++..+....++.++..|++++.+|..|.||||+|+..|+ .+++++|++.|
T Consensus 63 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g 134 (235)
T COG0666 63 DRHLAARDLDGRLPL--------HSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAG 134 (235)
T ss_pred ccccccCCccccCHH--------HHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcC
Confidence 344555666778888 99999999999999999999999999999999999999999 99999999999
Q ss_pred C---CCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccchhhhh
Q 008477 90 A---ICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEA 149 (564)
Q Consensus 90 a---~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~l~~~ 149 (564)
+ +.+..|..|.| +|+|+. +.+++++|+..|+++...+ ..|.|+++.|+..++.-+...
T Consensus 135 ~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~ 198 (235)
T COG0666 135 ADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRN--SYGVTALDPAAKNGRIELVKL 198 (235)
T ss_pred CCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccc--cCCCcchhhhcccchHHHHHH
Confidence 9 66677999998 788888 7789999999999988876 889999999999888543333
No 97
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.09 E-value=3.3e-10 Score=110.09 Aligned_cols=257 Identities=43% Similarity=0.647 Sum_probs=149.3
Q ss_pred hHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 008477 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (564)
Q Consensus 8 ~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll 86 (564)
.+...+. |++||++|....+|| .+|+..||.++++.|+++|+-.+.-..+|... ||++.+. .+-++||
T Consensus 51 ~v~~LVetgvnVN~vD~fD~spL--------~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLnd--~IR~mll 119 (516)
T KOG0511|consen 51 RVRYLVETGVNVNAVDRFDSSPL--------YLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALND--RIRRMLL 119 (516)
T ss_pred HHHHHHHhCCCcchhhcccccHH--------HHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhhH--HHHHHHH
Confidence 3445555 999999999999999 99999999999999999999887777778776 4454443 2344555
Q ss_pred hCCCCCCCccCCCCchHHHHchHHHHHHHHhccCCCCCCCcccc--ccccchhccccccchhhhhHHhhcccccccCCCC
Q 008477 87 ESGAICSEHTFDGDRCHYAALNLKVRKLLKAYEARPPPLGPLQA--ALRDTFLGCGANRQFLEEAEVVLGISGVTSNGAS 164 (564)
Q Consensus 87 ~~ga~~~~~d~~g~tl~~aa~~~~i~~lLl~~~~~~~~~~~~~~--g~t~lh~A~~~~~~~l~~~~~~~~~~~l~~~~~~ 164 (564)
.... +....++.+....+.. ..|.+| |-.+..++++....++...++-..++
T Consensus 120 sydi------------------------~KA~d~~qP~aahi~s~l~dt~l~--~~~di~f~~q~g~~f~ahkfll~arS 173 (516)
T KOG0511|consen 120 SYDI------------------------LKAFDARQPPAAHIQSSLRDTFLG--CCHDIDFLQQEGANFDAHKFLLEARS 173 (516)
T ss_pred HHHH------------------------HHHhhccCCcchHHHHHhhccccc--cccchHHHhhccccccHHHHHHHhhh
Confidence 3311 1111111111111111 112222 11222222222222211111111111
Q ss_pred CCCCCCCCeEEEecCeeechhhHhhcccChhHHHhccc---cccccccceEEcC-CCCHHHHHHHhhhHccCCccCCccc
Q 008477 165 NSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFET---DWRYRNEIRFSRE-KLSYPALYGLIHFFYSDRLEIAVDD 240 (564)
Q Consensus 165 ~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~l~~~---~~~e~~~~~i~l~-~v~~~~~~~lL~ylYtg~~~i~~~~ 240 (564)
+.-...||.+-+.|++|.+||+++.+++++|+.++.. .|+..-..-+.++ ..+.+-|.. .++.+.
T Consensus 174 -s~~~~k~v~~~~~~heI~~~~v~~~~f~~flk~lyl~~na~~~~qynallsi~~kF~~e~l~~----------~~~kdr 242 (516)
T KOG0511|consen 174 -SNYFPKDVMFYVQGHEIEAHRVILSAFSPFLKQLYLNTNAEWKDQYNALLSIEVKFSKEKLSL----------EISKDR 242 (516)
T ss_pred -cccCchhhhhccccCchhhhhhhHhhhhHHHHHHHHhhhhhhhhHHHHHHhhhhhccHHHhHH----------HHhhhH
Confidence 1123358999999999999999999999999998864 2222111111110 011111111 123344
Q ss_pred HHHHHHHHhHhcHHHHHHHHHHHHHHHHHHHHcCcHHHHHH-HHHHHhhcCC--CCCCCccchhHHHHHHHHhhh
Q 008477 241 MEDLVKICKVCKCESLQRIIEKELIHQKYAEYKALRDVDNS-QKRFILQGSA--LPEEDRLPAALSRILQISLAR 312 (564)
Q Consensus 241 ~~~ll~~a~~c~~~~L~~~l~~~l~~~~~a~~~~~~~L~~~-~~~~i~~~~~--v~~~~~l~~~l~~~~~~~~~~ 312 (564)
-+.+...++.||+.+.+..++..+.....|..-.-.++.+. ..+|+..+-- ++++.+++..+..+.+.....
T Consensus 243 ~~~~sR~~k~~q~~~tq~~~~~~Li~~~~~~ykt~~dl~Ns~~~~fsl~~ayiql~~~~RyP~hla~i~R~eyfk 317 (516)
T KOG0511|consen 243 MEDLSRICKVCQCESTQKIIEKELIHQRYAEYKTHRDLDNSPMKRFSLQGAYIQLPEEDRYPAHLARILRVEYFK 317 (516)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhccchhhccChhheeeeccccccccccccccHHHHHHHHHHHHH
Confidence 45556677888999999999988777777776666666665 5666666522 366777777776665554333
No 98
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.08 E-value=3.1e-10 Score=106.70 Aligned_cols=93 Identities=25% Similarity=0.331 Sum_probs=78.3
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcc
Q 008477 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR-DQWDSVALYYACLAGHLDAARMLLESGAICSEHT 96 (564)
Q Consensus 18 v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~-d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d 96 (564)
+|..|..|++|| ..|+..|+.++++.|++.|+|+|.. +..+.||||+|+..|+.+++++|++.|+.+...|
T Consensus 38 vn~~D~sGMs~L--------ahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vN 109 (396)
T KOG1710|consen 38 VNQRDPSGMSVL--------AHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVN 109 (396)
T ss_pred hhccCCCcccHH--------HHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCcccccc
Confidence 888899999999 8888999999999999999998874 5678899999999999999999999999988888
Q ss_pred CCCCc-hHHHHc--hHHHHHHHHhc
Q 008477 97 FDGDR-CHYAAL--NLKVRKLLKAY 118 (564)
Q Consensus 97 ~~g~t-l~~aa~--~~~i~~lLl~~ 118 (564)
.-|+| ...||. +++.+.++.++
T Consensus 110 svgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 110 SVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred chhhhHHHHHHHhcchHHHHHHhcc
Confidence 88888 566666 77777776543
No 99
>PHA02792 ankyrin-like protein; Provisional
Probab=99.06 E-value=5e-10 Score=119.88 Aligned_cols=110 Identities=15% Similarity=0.155 Sum_probs=91.2
Q ss_pred hhhHHhhcC-CCCCCCCCCCC--CCCCCCCCChhHHHHHhcCCH---HHHHHHHHcCCCccccCCCCCcHHHHHHHcCCH
Q 008477 6 QSTIDAELD-EIDLDASDFSS--SVPLKKVPNGDVFEASRAGDV---DRLRYILESGVNVNARDQWDSVALYYACLAGHL 79 (564)
Q Consensus 6 ~~~l~~~~~-g~~v~~~d~~g--~tpL~~~~~~~l~~Aa~~g~~---~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~ 79 (564)
..+++-.+. |++++.+|..| .||| |.|+..+.. ++++.|+++|+++|.+|..|+||||+|+..++.
T Consensus 352 ~eIVelLIs~GADIN~kD~~g~~~TpL--------h~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~ 423 (631)
T PHA02792 352 PKVVEYILKNGNVVVEDDDNIINIMPL--------FPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSV 423 (631)
T ss_pred HHHHHHHHHcCCchhhhcCCCCChhHH--------HHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCH
Confidence 345555555 99999999886 5788 988776654 457888999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCccCCCCc-hHHHHc------------hHHHHHHHHhccCCCC
Q 008477 80 DAARMLLESGAICSEHTFDGDR-CHYAAL------------NLKVRKLLKAYEARPP 123 (564)
Q Consensus 80 ~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~------------~~~i~~lLl~~~~~~~ 123 (564)
+++++|+++|++++..|..|.| +|+|+. ..+++++|+++|.++.
T Consensus 424 eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~ 480 (631)
T PHA02792 424 SLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE 480 (631)
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence 9999999999999999999998 676653 1466888888886553
No 100
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.06 E-value=2.1e-10 Score=120.89 Aligned_cols=122 Identities=20% Similarity=0.122 Sum_probs=101.0
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (564)
.+.++..|..|.+|| |+|++.|+.++++.++.++..+|..+..|.||||.|+..||.+++.+|+.+|+|+-+
T Consensus 72 ea~ldl~d~kg~~pl--------hlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i 143 (854)
T KOG0507|consen 72 EALLDLCDTKGILPL--------HLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFI 143 (854)
T ss_pred hhhhhhhhccCcceE--------EehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccc
Confidence 677888888999999 999999999999999999988999999999999999999999999999999999999
Q ss_pred ccCCCCchHHHHc---hHHHHHHHHhccCCCCCCC------ccccccccchhccccccc
Q 008477 95 HTFDGDRCHYAAL---NLKVRKLLKAYEARPPPLG------PLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 95 ~d~~g~tl~~aa~---~~~i~~lLl~~~~~~~~~~------~~~~g~t~lh~A~~~~~~ 144 (564)
+|.++.|+|-+|. ..++++.|+.......... ....+.+|+|+|.+++|.
T Consensus 144 ~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~ 202 (854)
T KOG0507|consen 144 RNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHV 202 (854)
T ss_pred cCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchH
Confidence 9999999776666 7788888876532211111 113467899999999984
No 101
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.00 E-value=3e-10 Score=119.73 Aligned_cols=118 Identities=21% Similarity=0.193 Sum_probs=109.1
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcc
Q 008477 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHT 96 (564)
Q Consensus 17 ~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d 96 (564)
.+|..|.+|.|.| |.||.+|+.++++.|+++.+-++.+|..|.+|||+|+..|+.+++++|+.++..+|..+
T Consensus 41 s~n~qd~~gfTal--------hha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~ 112 (854)
T KOG0507|consen 41 SHNLQDYSGFTLL--------HHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVN 112 (854)
T ss_pred cccccCccchhHH--------HHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCccc
Confidence 3566777888888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 97 FDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 97 ~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
..|.+ +|.++. +.+++.+|+.+|+++...+ ..+.|++-+||+-++.
T Consensus 113 ~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~n--ns~~t~ldlA~qfgr~ 161 (854)
T KOG0507|consen 113 IENETPLHLAAQHGHLEVVFYLLKKNADPFIRN--NSKETVLDLASRFGRA 161 (854)
T ss_pred ccCcCccchhhhhcchHHHHHHHhcCCCccccC--cccccHHHHHHHhhhh
Confidence 99987 899999 8999999999999999877 8899999999998884
No 102
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.97 E-value=2.2e-09 Score=102.78 Aligned_cols=101 Identities=30% Similarity=0.362 Sum_probs=91.8
Q ss_pred hhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCC-----HHHHHHHHHcCC---CccccCCCCCcHHHHHHHcCCHHH
Q 008477 11 AELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGD-----VDRLRYILESGV---NVNARDQWDSVALYYACLAGHLDA 81 (564)
Q Consensus 11 ~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~-----~~~v~~Ll~~g~---~~n~~d~~g~TpL~~A~~~g~~~~ 81 (564)
..+. |++++.+|..|.||| |+|+..|+ .++++.|++.|+ +.+.+|..|+||||+|+..|+.++
T Consensus 91 ~l~~~~~~~~~~~~~g~t~l--------~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~ 162 (235)
T COG0666 91 LLLASGADVNAKDADGDTPL--------HLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADI 162 (235)
T ss_pred HHHHcCCCcccccCCCCcHH--------HHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHH
Confidence 4444 999999999999999 99999999 999999999999 566679999999999999999999
Q ss_pred HHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhcc
Q 008477 82 ARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYE 119 (564)
Q Consensus 82 v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~ 119 (564)
+++|++.|++++..+..|.| ++.++. +..++..+...+
T Consensus 163 ~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 163 VELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred HHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999998 788877 778888888866
No 103
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.95 E-value=1.4e-09 Score=109.87 Aligned_cols=99 Identities=24% Similarity=0.222 Sum_probs=63.6
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHH
Q 008477 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRK 113 (564)
Q Consensus 37 l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~ 113 (564)
|.-|+..|.+++|+..+..-.|+...+..|.||||-|+..||.+||++|++.|+++|..|.+|+| +|+||. +..+++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck 633 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK 633 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence 45566677777777766666666666667777777777777777777777777777777777776 666666 556666
Q ss_pred HHHhccCCCCCCCccccccccch
Q 008477 114 LLKAYEARPPPLGPLQAALRDTF 136 (564)
Q Consensus 114 lLl~~~~~~~~~~~~~~g~t~lh 136 (564)
.|.+.|+-+-.. ++.++.|+..
T Consensus 634 qLVe~GaavfAs-TlSDmeTa~e 655 (752)
T KOG0515|consen 634 QLVESGAAVFAS-TLSDMETAAE 655 (752)
T ss_pred HHHhccceEEee-ecccccchhh
Confidence 676666654331 1234444443
No 104
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.90 E-value=3.9e-09 Score=117.39 Aligned_cols=86 Identities=24% Similarity=0.315 Sum_probs=78.9
Q ss_pred HHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 008477 9 IDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE 87 (564)
Q Consensus 9 l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~ 87 (564)
+...++ |+++|.+|..|+||| |+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++
T Consensus 98 vk~LL~~Gadin~~d~~G~TpL--------h~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 169 (664)
T PTZ00322 98 ARILLTGGADPNCRDYDGRTPL--------HIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSR 169 (664)
T ss_pred HHHHHHCCCCCCCcCCCCCcHH--------HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHh
Confidence 444455 999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred C-------CCCCCCccCCCCch
Q 008477 88 S-------GAICSEHTFDGDRC 102 (564)
Q Consensus 88 ~-------ga~~~~~d~~g~tl 102 (564)
+ |++++..+..|.++
T Consensus 170 ~~~~~~~~ga~~~~~~~~g~~~ 191 (664)
T PTZ00322 170 HSQCHFELGANAKPDSFTGKPP 191 (664)
T ss_pred CCCcccccCCCCCccccCCCCc
Confidence 8 88888888877653
No 105
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=98.88 E-value=4e-09 Score=103.76 Aligned_cols=127 Identities=18% Similarity=0.258 Sum_probs=110.2
Q ss_pred ccccCCCCCCCCCCCCeEEEecCeeechhhHhhcccChhHHHhccccccccccceEEc----CCCCHHHHHHHhhhHccC
Q 008477 157 GVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSR----EKLSYPALYGLIHFFYSD 232 (564)
Q Consensus 157 ~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l----~~v~~~~~~~lL~ylYtg 232 (564)
+|+.++..+ ||++.+-|.+.+.||..| ..|+||++||.|.|+|++...|.+ +.++.+++..++.-+|.+
T Consensus 62 ~lf~q~enS------Dv~l~alg~eWrlHk~yL-~QS~yf~smf~Gtw~es~~~iIqleI~Dp~Id~~al~~a~gsLY~d 134 (488)
T KOG4682|consen 62 NLFLQGENS------DVILEALGFEWRLHKPYL-FQSEYFKSMFSGTWKESSMNIIQLEIPDPNIDVVALQVAFGSLYRD 134 (488)
T ss_pred HHHhcCCCc------ceehhhccceeeeeeeee-eccHHHHHHhccccChhhCceEEEEcCCCcccHHHHHHHHhhhhhh
Confidence 455555555 999999999999999999 568999999999999998655544 578999999999999999
Q ss_pred CccCCcccHHHHHHHH---------hHhcHHHHHHHHH--HHHHHHHHHHHcCcHHHHHHHHHHHhhcCC
Q 008477 233 RLEIAVDDMEDLVKIC---------KVCKCESLQRIIE--KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (564)
Q Consensus 233 ~~~i~~~~~~~ll~~a---------~~c~~~~L~~~l~--~~l~~~~~a~~~~~~~L~~~~~~~i~~~~~ 291 (564)
++.|..+.+..++.+| +.| .+.+.+.+. +....+..+..||...+.+.|.+.+..|+-
T Consensus 135 EveI~l~dv~gvlAaA~~lqldgl~qrC-~evMie~lspkta~~yYea~ckYgle~vk~kc~ewl~~nl~ 203 (488)
T KOG4682|consen 135 EVEIKLSDVVGVLAAACLLQLDGLIQRC-GEVMIETLSPKTACGYYEAACKYGLESVKKKCLEWLLNNLM 203 (488)
T ss_pred heeccHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHhcChhhhhHhhhhhhhhhhHHHHHHHHHHHHHhhH
Confidence 9999999999999998 567 677777666 578899999999999999999999988875
No 106
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.88 E-value=1.7e-08 Score=86.75 Aligned_cols=102 Identities=34% Similarity=0.507 Sum_probs=88.8
Q ss_pred hhhHHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q 008477 6 QSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARM 84 (564)
Q Consensus 6 ~~~l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~ 84 (564)
...+...++ |.+.+..+..|.||+ |+|+..++.++++.|+..|++++..+..|.||+|+|+..++.+++++
T Consensus 20 ~~~i~~li~~~~~~~~~~~~g~~~l--------~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ 91 (126)
T cd00204 20 LEVVKLLLENGADVNAKDNDGRTPL--------HLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKL 91 (126)
T ss_pred HHHHHHHHHcCCCCCccCCCCCcHH--------HHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHH
Confidence 355566665 777789999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHH
Q 008477 85 LLESGAICSEHTFDGDR-CHYAAL--NLKVRKLL 115 (564)
Q Consensus 85 Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lL 115 (564)
|+..|.+++..+..|.+ +++|.. +.+++++|
T Consensus 92 L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 92 LLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred HHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 99999999999999988 566655 56666655
No 107
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.85 E-value=4.9e-09 Score=111.10 Aligned_cols=123 Identities=22% Similarity=0.327 Sum_probs=96.4
Q ss_pred CCCCeEEEe-cCeeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHcc-CCccC-----CcccH
Q 008477 169 FPPDVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYS-DRLEI-----AVDDM 241 (564)
Q Consensus 169 ~~~Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYt-g~~~i-----~~~~~ 241 (564)
...|+.++. +|+.++|||++|++|.+||..||..-|.|++...+....++.+.++.+|+|+|+ ++..+ ..+-+
T Consensus 709 e~~d~~i~~KDGkvl~aHkc~L~aRlEYF~smf~~~w~E~sS~t~~~~p~~~e~m~ivLdylYs~d~~~~~k~~~~~dF~ 788 (1267)
T KOG0783|consen 709 ETMDTVIKLKDGKVLKAHKCFLSARLEYFSSMFQFVWMESSSITVNLSPLTVEHMSIVLDYLYSDDKVELFKDLKESDFM 788 (1267)
T ss_pred cceeEEEEecCCcCcccceeEeeeHHHHHHHHHHHHHhhhccceeecCcchHHHHHHHHHHHHccchHHHHhccchhhhh
Confidence 344666666 777899999999999999999999999999988877777779999999999995 44332 23345
Q ss_pred HHHHHHHhHhcHHHHHHHHH----------HHHHHHHHHHHcCcHHHHHHHHHHHhhcCC
Q 008477 242 EDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (564)
Q Consensus 242 ~~ll~~a~~c~~~~L~~~l~----------~~l~~~~~a~~~~~~~L~~~~~~~i~~~~~ 291 (564)
-+++.+|+.+-+..|++.++ ++-.+++||..|++..|...|.+||..|++
T Consensus 789 ~~il~iaDqlli~~Lk~Ice~~ll~kl~lk~~~~llefaamY~ak~L~~~C~dfic~N~~ 848 (1267)
T KOG0783|consen 789 FEILSIADQLLILELKSICEQSLLRKLNLKTLPTLLEFAAMYHAKELYSRCIDFICHNIE 848 (1267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhcccchHHHHHHHHHhhHHHHHHHHHHHHHHhHH
Confidence 66666664332344443332 578899999999999999999999999877
No 108
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.84 E-value=6.7e-09 Score=105.10 Aligned_cols=86 Identities=23% Similarity=0.235 Sum_probs=73.2
Q ss_pred CCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccC-CCCchHHHHc---
Q 008477 32 VPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTF-DGDRCHYAAL--- 107 (564)
Q Consensus 32 ~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tl~~aa~--- 107 (564)
.+++.||-|+..||.++|++|++.|+|+|..|.+||||||.|+.+++..+++.|++.|+-+-+.+. ++.|...-|.
T Consensus 582 EGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~e 661 (752)
T KOG0515|consen 582 EGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEME 661 (752)
T ss_pred cchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhhcchhh
Confidence 589999999999999999999999999999999999999999999999999999999988765543 4456555555
Q ss_pred --hHHHHHHHHh
Q 008477 108 --NLKVRKLLKA 117 (564)
Q Consensus 108 --~~~i~~lLl~ 117 (564)
...+.++|..
T Consensus 662 eGY~~CsqyL~~ 673 (752)
T KOG0515|consen 662 EGYDQCSQYLYG 673 (752)
T ss_pred hhHHHHHHHHHH
Confidence 4556666654
No 109
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.77 E-value=1.6e-08 Score=73.76 Aligned_cols=51 Identities=35% Similarity=0.537 Sum_probs=41.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHH
Q 008477 66 DSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLK 116 (564)
Q Consensus 66 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl 116 (564)
|+||||+|+..|+.+++++|+++|++++.+|..|.| +|+|+. +.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 789999999999999999999999999999999998 788888 888888875
No 110
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.70 E-value=1.8e-08 Score=109.72 Aligned_cols=175 Identities=16% Similarity=0.157 Sum_probs=115.6
Q ss_pred HHhhcC-CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHH
Q 008477 9 IDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR-DQWDSVALYYACLAGHLDAARMLL 86 (564)
Q Consensus 9 l~~~~~-g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~-d~~g~TpL~~A~~~g~~~~v~~Ll 86 (564)
+.-++. |+++..+|+.|.+|| +.|+-.||..+|+.|+++.++++.+ |..+.|+|-+||..|..++|++||
T Consensus 773 vellv~rganiehrdkkgf~pl--------Imaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl 844 (2131)
T KOG4369|consen 773 VELLVVRGANIEHRDKKGFVPL--------IMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLL 844 (2131)
T ss_pred HHHHHHhcccccccccccchhh--------hhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHH
Confidence 333444 788888888888888 8888888888888888888887764 677888888888888888888888
Q ss_pred hCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCccccccccchhccccccchhhhhHHhhcccccccCCC
Q 008477 87 ESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTSNGA 163 (564)
Q Consensus 87 ~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~~l~~~~~~~~~~~l~~~~~ 163 (564)
..|++-..++-...| +-.|.. ..+++++|+.+|..++.+..-+.|..||.+|...+|.......+. .-+.+..+-.
T Consensus 845 ~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~-~gsdiNaqIe 923 (2131)
T KOG4369|consen 845 NAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQ-PGSDINAQIE 923 (2131)
T ss_pred HhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhc-ccchhccccc
Confidence 888877777766666 344444 788888888888777766555678888888888887422111110 0011111110
Q ss_pred CCCCCCCCCeEEEecCeeechhhHhhcccChh
Q 008477 164 SNSDSFPPDVVFYVQGRPIEAHRVILSARSVF 195 (564)
Q Consensus 164 ~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~ 195 (564)
. ..-+-.++.+=-.+-.+|+.+|+++.-.
T Consensus 924 T---NrnTaltla~fqgr~evv~lLLa~~anv 952 (2131)
T KOG4369|consen 924 T---NRNTALTLALFQGRPEVVFLLLAAQANV 952 (2131)
T ss_pred c---ccccceeeccccCcchHHHHHHHHhhhh
Confidence 0 1112344444334567888888877543
No 111
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.66 E-value=7.1e-08 Score=91.04 Aligned_cols=107 Identities=24% Similarity=0.197 Sum_probs=91.5
Q ss_pred hhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCc-cCCCCc-hHHHHc--hHH
Q 008477 35 GDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH-TFDGDR-CHYAAL--NLK 110 (564)
Q Consensus 35 ~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~-d~~g~t-l~~aa~--~~~ 110 (564)
.+|..+.-.|+.+....|++.--++|..|..|.|+|..|+..|+.++|++|++.|||+|.. +..+.| +|+||. +.+
T Consensus 14 ~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~d 93 (396)
T KOG1710|consen 14 SPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQD 93 (396)
T ss_pred hHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCch
Confidence 3449999999999999999876669999999999999999999999999999999999954 344556 899998 899
Q ss_pred HHHHHHhccCCCCCCCccccccccchhcccccc
Q 008477 111 VRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (564)
Q Consensus 111 i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~ 143 (564)
+..+|++.|+++...+ .-|.|+-.+|+=-|+
T Consensus 94 vcrllldaGa~~~~vN--svgrTAaqmAAFVG~ 124 (396)
T KOG1710|consen 94 VCRLLLDAGARMYLVN--SVGRTAAQMAAFVGH 124 (396)
T ss_pred HHHHHHhccCcccccc--chhhhHHHHHHHhcc
Confidence 9999999999998877 667787766654444
No 112
>PF13606 Ank_3: Ankyrin repeat
Probab=98.64 E-value=3.8e-08 Score=61.87 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=28.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 008477 65 WDSVALYYACLAGHLDAARMLLESGAICSE 94 (564)
Q Consensus 65 ~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (564)
+|+||||+||..|+.+++++|+++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999873
No 113
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.56 E-value=1e-07 Score=61.62 Aligned_cols=33 Identities=30% Similarity=0.382 Sum_probs=30.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccC
Q 008477 65 WDSVALYYACLAGHLDAARMLLESGAICSEHTF 97 (564)
Q Consensus 65 ~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~ 97 (564)
+|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999998763
No 114
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.53 E-value=5.9e-08 Score=105.86 Aligned_cols=107 Identities=21% Similarity=0.217 Sum_probs=96.4
Q ss_pred hHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC-ccCCCCc-hHHHHc--hHHH
Q 008477 36 DVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE-HTFDGDR-CHYAAL--NLKV 111 (564)
Q Consensus 36 ~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t-l~~aa~--~~~i 111 (564)
.|-.||.+||.+.++.|+.+|+++.-+|+.|.+||.+|+..||..+|+.|+.+.++++. .|+.+.| +-.+|. +.++
T Consensus 760 ~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~v 839 (2131)
T KOG4369|consen 760 NLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRV 839 (2131)
T ss_pred cccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchH
Confidence 34999999999999999999999999999999999999999999999999999999995 5777777 666776 8999
Q ss_pred HHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 112 RKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 112 ~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
+++|+.+|++...++ -.++|||.+|...+-.
T Consensus 840 velLl~~gankehrn--vsDytPlsla~Sggy~ 870 (2131)
T KOG4369|consen 840 VELLLNAGANKEHRN--VSDYTPLSLARSGGYT 870 (2131)
T ss_pred HHHHHHhhccccccc--hhhcCchhhhcCcchH
Confidence 999999999988877 8899999998776654
No 115
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.38 E-value=7.6e-07 Score=89.86 Aligned_cols=88 Identities=20% Similarity=0.133 Sum_probs=75.7
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcc
Q 008477 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLESGAICSEHT 96 (564)
Q Consensus 18 v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d-~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d 96 (564)
+-.+|.+|.|.- +...+||..++.|+.+..-.|+..|+++|..+ ..|.||||.|+..|+..-+++|+-.|||++..|
T Consensus 120 ~~~rDdD~~~~~--~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d 197 (669)
T KOG0818|consen 120 LPCRDDDSVTAK--DLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQD 197 (669)
T ss_pred CCCCCcchhhHH--HHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCC
Confidence 345666665543 56778999999999999999999999999987 579999999999999999999999999999999
Q ss_pred CCCCchHHHHc
Q 008477 97 FDGDRCHYAAL 107 (564)
Q Consensus 97 ~~g~tl~~aa~ 107 (564)
.+|.|+...|.
T Consensus 198 ~~GmtP~~~AR 208 (669)
T KOG0818|consen 198 SSGMTPVDYAR 208 (669)
T ss_pred CCCCcHHHHHH
Confidence 99998655554
No 116
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.32 E-value=8.4e-07 Score=79.09 Aligned_cols=135 Identities=16% Similarity=0.172 Sum_probs=98.2
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCCccCCCCchHHHHc---hHHHHHHHHhccCCCCCCCccccc
Q 008477 56 GVNVNARDQWDSVALYYACLAGHLDAARMLLESG-AICSEHTFDGDRCHYAAL---NLKVRKLLKAYEARPPPLGPLQAA 131 (564)
Q Consensus 56 g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tl~~aa~---~~~i~~lLl~~~~~~~~~~~~~~g 131 (564)
+.++|.+|..|||||+.|+..|..+.+.||+.+| +++...|..|......|. ..+++..|.+...+..... ...
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~--nss 79 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPM--NSS 79 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCcc--cCC
Confidence 4679999999999999999999999999999999 899999999987444444 7788888888755544422 333
Q ss_pred cccchhccccccchhhhhHHhhcccccccCCCCCCCCCCCCeEEEecCeee---chhhHhhcccChhHHHhcccccccc
Q 008477 132 LRDTFLGCGANRQFLEEAEVVLGISGVTSNGASNSDSFPPDVVFYVQGRPI---EAHRVILSARSVFFRRKFETDWRYR 207 (564)
Q Consensus 132 ~t~lh~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~---~~Hk~iL~a~S~~f~~l~~~~~~e~ 207 (564)
.++--.+|+..+.++++.+...|.+|.-.. ...+.+ +.|...+...|+-|+-|..++|.+.
T Consensus 80 ~~e~lfyCE~Cd~~ip~~~~snH~tSttHl---------------lsl~~~pa~k~~p~~i~pks~GyrLl~~~GW~pe 143 (223)
T KOG2384|consen 80 RDEALFYCEVCDIYIPNSKKSNHFTSTTHL---------------LSLQHIPANKFQPHLIKPKSLGYRLLSQYGWSPE 143 (223)
T ss_pred CCCccchhhhhhhhccCCCCccchhhHHHH---------------hhhccCCCCCCCCCcCCCCCchHHHHHhcCCCcc
Confidence 333444688888887776665555543211 112223 3455678888999999999888754
No 117
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.27 E-value=9.7e-07 Score=88.74 Aligned_cols=84 Identities=25% Similarity=0.280 Sum_probs=76.6
Q ss_pred HHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCccCCCCchHHHHc---hHHHHH
Q 008477 38 FEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES-GAICSEHTFDGDRCHYAAL---NLKVRK 113 (564)
Q Consensus 38 ~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tl~~aa~---~~~i~~ 113 (564)
++|+..|++..++.+.-.|.|++.+|.+.+|+||.|+..|+++++++|++. +.+++.+|+-|+|++.-|. +.++++
T Consensus 511 ~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k 590 (622)
T KOG0506|consen 511 MYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVK 590 (622)
T ss_pred hhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHH
Confidence 999999999999999999999999999999999999999999999999976 7999999999998665555 889999
Q ss_pred HHHhccCC
Q 008477 114 LLKAYEAR 121 (564)
Q Consensus 114 lLl~~~~~ 121 (564)
+|.+....
T Consensus 591 ~L~~~~~~ 598 (622)
T KOG0506|consen 591 LLEEAQYP 598 (622)
T ss_pred HHHHHhcc
Confidence 99876553
No 118
>PF13606 Ank_3: Ankyrin repeat
Probab=98.19 E-value=1.4e-06 Score=54.73 Aligned_cols=30 Identities=37% Similarity=0.746 Sum_probs=27.9
Q ss_pred CCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccc
Q 008477 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNA 61 (564)
Q Consensus 24 ~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~ 61 (564)
+|+||| |+||..|+.+++++|+++|+|+|.
T Consensus 1 ~G~T~L--------h~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPL--------HLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHH--------HHHHHhCCHHHHHHHHHcCCCCCC
Confidence 488999 999999999999999999999974
No 119
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.17 E-value=5.8e-06 Score=89.05 Aligned_cols=84 Identities=18% Similarity=0.105 Sum_probs=75.7
Q ss_pred hHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--CCCccCCCCch-HHHHc--hHH
Q 008477 36 DVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI--CSEHTFDGDRC-HYAAL--NLK 110 (564)
Q Consensus 36 ~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~tl-~~aa~--~~~ 110 (564)
+|-.||..++.+++++|+++|+|++++|..|+|.||.-+.+-..++-.+++++|++ ..++|.+|-|| -.||. +.+
T Consensus 243 PLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~e 322 (782)
T KOG3676|consen 243 PLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKE 322 (782)
T ss_pred chHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHH
Confidence 34999999999999999999999999999999999999999889999999999999 88999999984 55555 888
Q ss_pred HHHHHHhcc
Q 008477 111 VRKLLKAYE 119 (564)
Q Consensus 111 i~~lLl~~~ 119 (564)
+.+.+++..
T Consensus 323 mf~~ile~~ 331 (782)
T KOG3676|consen 323 MFQHILERR 331 (782)
T ss_pred HHHHHHHhh
Confidence 888888763
No 120
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.10 E-value=7.4e-06 Score=84.38 Aligned_cols=93 Identities=20% Similarity=0.204 Sum_probs=79.0
Q ss_pred CCChhHHHHHhcCCHHHHHHHHHcCCC--cc--ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHH
Q 008477 32 VPNGDVFEASRAGDVDRLRYILESGVN--VN--ARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAA 106 (564)
Q Consensus 32 ~~~~~l~~Aa~~g~~~~v~~Ll~~g~~--~n--~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa 106 (564)
....+|..|....++..+-.|+.+|.. +| +-+.+|.||||+||..|++...++|+.+|+|+..+|.+|+| +.||-
T Consensus 623 ~lgqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar 702 (749)
T KOG0705|consen 623 PLGQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYAR 702 (749)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHh
Confidence 356778889999999999999999865 33 23567899999999999999999999999999999999999 45554
Q ss_pred c--hHHHHHHHHhccCCCCC
Q 008477 107 L--NLKVRKLLKAYEARPPP 124 (564)
Q Consensus 107 ~--~~~i~~lLl~~~~~~~~ 124 (564)
. ..+++.+|+.+|+...-
T Consensus 703 ~a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 703 QAGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred hcccHHHHHHHHHcCCCccc
Confidence 4 78999999999986543
No 121
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.09 E-value=2.7e-06 Score=54.88 Aligned_cols=33 Identities=33% Similarity=0.638 Sum_probs=30.5
Q ss_pred CCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCC
Q 008477 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ 64 (564)
Q Consensus 24 ~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~ 64 (564)
+|.||| |+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpL--------h~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPL--------HYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHH--------HHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHH--------HHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 478888 999999999999999999999998874
No 122
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism]
Probab=98.08 E-value=2e-05 Score=74.08 Aligned_cols=99 Identities=23% Similarity=0.373 Sum_probs=82.6
Q ss_pred EEEEeCCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCCCCCCcccc
Q 008477 345 VCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQVC 424 (564)
Q Consensus 345 v~~~~~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~l~~~~~~ 424 (564)
|.+-|||+.|...+.-|.-...+|++|+.. ++. ...+....|-| |=||..|..+|+||-.|.+ .++..
T Consensus 7 vkLnvGG~~F~Tsk~TLtk~dg~fk~m~e~--~i~-----~~~d~s~~IFI-DRSpKHF~~ILNfmRdGdv-~LPe~--- 74 (230)
T KOG2716|consen 7 VKLNVGGTIFKTSKSTLTKFDGFFKTMLET--DIP-----VEKDESGCIFI-DRSPKHFDTILNFMRDGDV-DLPES--- 74 (230)
T ss_pred EEEecCCeEEEeehhhhhhhhhHHHHHhhc--CCc-----cccCCcCcEEe-cCChhHHHHHHHhhhcccc-cCccc---
Confidence 557889999999999999999999999987 331 12223456777 6699999999999999999 47665
Q ss_pred cCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhc
Q 008477 425 CNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHL 475 (564)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l 475 (564)
...+.||+.=|.+|++++|.+.|+..|...+
T Consensus 75 --------------------~kel~El~~EA~fYlL~~Lv~~C~~~i~~~~ 105 (230)
T KOG2716|consen 75 --------------------EKELKELLREAEFYLLDGLVELCQSAIARLI 105 (230)
T ss_pred --------------------hHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc
Confidence 4488999999999999999999999887664
No 123
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.04 E-value=6e-06 Score=84.62 Aligned_cols=96 Identities=19% Similarity=0.238 Sum_probs=70.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCC--ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 008477 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVN--VNARDQWDSVALYYACLAGHLDAARMLLESGAI 91 (564)
Q Consensus 14 ~g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~--~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~ 91 (564)
.|.++-.++.+..+.| |+|+..|+-++|++++.+|.. .++.|..|.|+||-|+..++..++++|++.||.
T Consensus 888 ~gg~ll~~~~~~~sll--------h~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagas 959 (1004)
T KOG0782|consen 888 NGGSLLIQGPDHCSLL--------HYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGAS 959 (1004)
T ss_pred cCCceEeeCcchhhHH--------HHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchh
Confidence 3566656666666666 888888888888888888765 577778888888888888888888888888888
Q ss_pred CCCccCCCCchHHHHc---hHHHHHHHHh
Q 008477 92 CSEHTFDGDRCHYAAL---NLKVRKLLKA 117 (564)
Q Consensus 92 ~~~~d~~g~tl~~aa~---~~~i~~lLl~ 117 (564)
....|..|.|+..-|. +.++..+|-.
T Consensus 960 l~ktd~kg~tp~eraqqa~d~dlaayle~ 988 (1004)
T KOG0782|consen 960 LRKTDSKGKTPQERAQQAGDPDLAAYLES 988 (1004)
T ss_pred heecccCCCChHHHHHhcCCchHHHHHhh
Confidence 8888888887654444 5666666543
No 124
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.91 E-value=7e-06 Score=82.72 Aligned_cols=69 Identities=25% Similarity=0.491 Sum_probs=64.7
Q ss_pred cCCCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHH-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 008477 13 LDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILE-SGVNVNARDQWDSVALYYACLAGHLDAARMLLESG 89 (564)
Q Consensus 13 ~~g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~-~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g 89 (564)
+.|.|++.+|.+.+|.| |.||..|+++++++|++ .+.+++.+|.||+|||--|...+|.+++++|-+.-
T Consensus 527 l~g~D~~~~DyD~RTaL--------HvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 527 LQGMDLETKDYDDRTAL--------HVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred Hhcccccccccccchhh--------eeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHh
Confidence 35899999999999999 99999999999999998 78999999999999999999999999999987653
No 125
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.90 E-value=2.2e-05 Score=70.28 Aligned_cols=71 Identities=24% Similarity=0.214 Sum_probs=65.5
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESG-VNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g-~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 93 (564)
+.++|++|..||||+ +.|+..|..+.+.+|+.+| +.+...|..|.+++.+|-..|+.++++.|.+.-.+-.
T Consensus 2 e~~in~rD~fgWTal--------mcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets 73 (223)
T KOG2384|consen 2 EGNINARDAFGWTAL--------MCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETS 73 (223)
T ss_pred CCCccchhhhcchHH--------HHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCC
Confidence 468999999999999 9999999999999999999 8899999999999999999999999999998744433
No 126
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.87 E-value=2.9e-05 Score=79.76 Aligned_cols=64 Identities=25% Similarity=0.330 Sum_probs=40.3
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll 86 (564)
+..++.+|..|.||| |+|+.-||...++.|+.+|+++..++..||+|||-|+..|+..++..++
T Consensus 45 ~~~id~~D~~g~TpL--------hlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vl 108 (560)
T KOG0522|consen 45 SLVIDRRDPPGRTPL--------HLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVL 108 (560)
T ss_pred hceeccccCCCCccH--------HHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHH
Confidence 344566666666666 6666666666666666666666666666666666666666665555444
No 127
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.71 E-value=5.2e-05 Score=78.34 Aligned_cols=66 Identities=30% Similarity=0.392 Sum_probs=61.4
Q ss_pred CCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 008477 20 ASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (564)
Q Consensus 20 ~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 93 (564)
..+.+|+|+| |+||+.|++...++|+=+|+|+-.+|..|+|+|.||-..|.-+|+..|+++|+...
T Consensus 656 ~~~~~grt~L--------HLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 656 CGEGDGRTAL--------HLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred ccCCCCcchh--------hhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 4567789999 99999999999999999999999999999999999999999999999999998644
No 128
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.70 E-value=9.5e-05 Score=76.09 Aligned_cols=82 Identities=29% Similarity=0.302 Sum_probs=66.8
Q ss_pred HHHHHhcCCHHHHHHHHH--cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHH
Q 008477 37 VFEASRAGDVDRLRYILE--SGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKV 111 (564)
Q Consensus 37 l~~Aa~~g~~~~v~~Ll~--~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i 111 (564)
+|+++...+.+-+..++. .+..++..|..|.||||+|+..|+...++.|+.+||++.++|.+|++ +|.|+. +..+
T Consensus 24 lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~ 103 (560)
T KOG0522|consen 24 LHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQI 103 (560)
T ss_pred cchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHH
Confidence 499998887766665433 45668999999999999999999999999999999999999999997 888888 5544
Q ss_pred H-HHHHhc
Q 008477 112 R-KLLKAY 118 (564)
Q Consensus 112 ~-~lLl~~ 118 (564)
+ .+|..+
T Consensus 104 i~~vlr~~ 111 (560)
T KOG0522|consen 104 ITEVLRHL 111 (560)
T ss_pred HHHHHHHh
Confidence 4 444443
No 129
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.63 E-value=0.00012 Score=75.24 Aligned_cols=109 Identities=18% Similarity=0.141 Sum_probs=92.5
Q ss_pred ChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--CCCccCCCCc-hHHHHc--h
Q 008477 34 NGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI--CSEHTFDGDR-CHYAAL--N 108 (564)
Q Consensus 34 ~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~t-l~~aa~--~ 108 (564)
...+..|+..+++-.+..+-..|.+.=.++.+..|.||+|+..|+.++|+|+|++|.. .++.|..|.| +|.||. +
T Consensus 867 seeil~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 867 SEEILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN 946 (1004)
T ss_pred cHHHHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence 4557888888887766666668888888888899999999999999999999999864 6677889998 888877 8
Q ss_pred HHHHHHHHhccCCCCCCCccccccccchhccccccc
Q 008477 109 LKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (564)
Q Consensus 109 ~~i~~lLl~~~~~~~~~~~~~~g~t~lh~A~~~~~~ 144 (564)
..+..+|.+.|+.....+ ..|.||-..|-+.+.+
T Consensus 947 r~vc~~lvdagasl~ktd--~kg~tp~eraqqa~d~ 980 (1004)
T KOG0782|consen 947 RAVCQLLVDAGASLRKTD--SKGKTPQERAQQAGDP 980 (1004)
T ss_pred hHHHHHHHhcchhheecc--cCCCChHHHHHhcCCc
Confidence 889999999999887755 8899999888777764
No 130
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=97.59 E-value=7e-05 Score=70.49 Aligned_cols=69 Identities=19% Similarity=0.270 Sum_probs=53.7
Q ss_pred CCCccEEEEeCCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCC
Q 008477 340 DDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGL 415 (564)
Q Consensus 340 ~~~~Dv~~~~~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~ 415 (564)
..-.|+-+......|+|||++|++||++|+.+.+++ .-.| ....-.|..-++..+.|.++|+|+|||+.
T Consensus 128 k~c~dldiiFkeTcfpahRA~laaRCpffK~l~nsd-~e~~------ae~i~dik~ag~dm~~feafLh~l~tgEf 196 (401)
T KOG2838|consen 128 KVCGDLDIIFKETCFPAHRAFLAARCPFFKILANSD-EEPE------AEDICDIKFAGFDMDAFEAFLHSLITGEF 196 (401)
T ss_pred eeeccceeeeeeccchHHHHHHHhhCcchhhhccCC-CCcc------hhhhhhhhhhccChHHHHHHHHHHHhccc
Confidence 445688888888999999999999999999999862 1111 11223455568899999999999999987
No 131
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.58 E-value=0.00013 Score=74.19 Aligned_cols=65 Identities=23% Similarity=0.288 Sum_probs=59.8
Q ss_pred CCCCCCC-CCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 008477 15 EIDLDAS-DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE 87 (564)
Q Consensus 15 g~~v~~~-d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~ 87 (564)
|+++|.. -..|.||| |.|++.|...-+++|+-+|+|++.+|.+|.||+-+|-..||-++.+.|++
T Consensus 156 GA~~N~~hpekg~TpL--------HvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 156 GAQANFFHPEKGNTPL--------HVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred ccccCCCCcccCCchh--------HHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 8999875 45789999 99999999999999999999999999999999999999999998877765
No 132
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.25 E-value=0.00026 Score=79.12 Aligned_cols=93 Identities=27% Similarity=0.227 Sum_probs=71.6
Q ss_pred CCCCCC--CCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 008477 15 EIDLDA--SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAIC 92 (564)
Q Consensus 15 g~~v~~--~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~ 92 (564)
|+++|. .-..|.|+| |.|+..|..-+++.|+..|+++|..|..|.||||.+...|+...+..|+++||+.
T Consensus 644 ~~~~n~~~~~~~~~s~l--------h~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~ 715 (785)
T KOG0521|consen 644 GCCENWPVVLCIGCSLL--------HVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADP 715 (785)
T ss_pred hhhhccchhhhcccchh--------hhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccc
Confidence 444543 234567777 9999999988899999999999999999999999999999988888888999999
Q ss_pred CCccCCCCc-hHHHHc--hHHHHHHH
Q 008477 93 SEHTFDGDR-CHYAAL--NLKVRKLL 115 (564)
Q Consensus 93 ~~~d~~g~t-l~~aa~--~~~i~~lL 115 (564)
++.+..|.. +.+|.. +.+++-++
T Consensus 716 ~a~~~~~~~~l~~a~~~~~~d~~~l~ 741 (785)
T KOG0521|consen 716 NAFDPDGKLPLDIAMEAANADIVLLL 741 (785)
T ss_pred cccCccCcchhhHHhhhccccHHHHH
Confidence 988888886 444433 44444443
No 133
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....
Probab=97.15 E-value=0.00064 Score=55.62 Aligned_cols=91 Identities=23% Similarity=0.150 Sum_probs=64.9
Q ss_pred EEEEeCCeEEecchhhhh-cccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhcc-CCCCCCCCcc
Q 008477 345 VCVRVDKKIFRCHQVVLA-SRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT-DGLKDIDPDQ 422 (564)
Q Consensus 345 v~~~~~~~~~~~Hk~iL~-arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt-~~~~~l~~~~ 422 (564)
|.+.|+|+.|.+-+..|. ....+|..|+.+. .+.. .......+-| +=++..|+.||+|+.+ +.++.....
T Consensus 1 V~lNVGG~~f~~~~~tL~~~~~s~l~~~~~~~-~~~~-----~~~~~~~~fi-DRdp~~F~~IL~ylr~~~~l~~~~~~- 72 (94)
T PF02214_consen 1 VRLNVGGTIFETSRSTLTRYPDSLLARLFSGE-RSDD-----YDDDDGEYFI-DRDPELFEYILNYLRTGGKLPIPDEI- 72 (94)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTSHHHTG-HGGG-----EETTTTEEEE-SS-HHHHHHHHHHHHHTSSB---TTS-
T ss_pred CEEEECCEEEEEcHHHHhhCCCChhhhHHhhc-cccc-----cCCccceEEe-ccChhhhhHHHHHHhhcCccCCCCch-
Confidence 678899999999999998 4567899999861 0111 1123356777 6699999999999999 666322233
Q ss_pred cccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhH-HHHH
Q 008477 423 VCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPL-KRAV 467 (564)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L-~~~c 467 (564)
....+++-|++|+++.| .+.|
T Consensus 73 ------------------------~~~~l~~Ea~fy~l~~l~i~~c 94 (94)
T PF02214_consen 73 ------------------------CLEELLEEAEFYGLDELFIEDC 94 (94)
T ss_dssp -------------------------HHHHHHHHHHHT-HHHHBHHC
T ss_pred ------------------------hHHHHHHHHHHcCCCccccCCC
Confidence 78899999999999998 6655
No 134
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=97.05 E-value=0.0018 Score=59.51 Aligned_cols=96 Identities=18% Similarity=0.217 Sum_probs=77.1
Q ss_pred CccEEEEeCCeEEecchhhhhcccH--HHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCCCCC
Q 008477 342 LADVCVRVDKKIFRCHQVVLASRSE--YFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDID 419 (564)
Q Consensus 342 ~~Dv~~~~~~~~~~~Hk~iL~arS~--~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~l~ 419 (564)
.+.|.+.++|+.|-.-+--|..|-| ...+||.+ ++|. .+++....+-| |=++..|+.+|.|+-.|+++..+
T Consensus 8 ~~~vrlnigGk~f~TTidTlv~rEPDSMLa~MF~~-~g~~-----~~~d~kGa~lI-DRsp~yFepIlNyLr~Gq~~~~s 80 (302)
T KOG1665|consen 8 SSMVRLNIGGKKFCTTIDTLVIREPDSMLAAMFSG-RGAM-----CQEDKKGAVLI-DRSPKYFEPILNYLRDGQIPSLS 80 (302)
T ss_pred hhhheeecCCeEEEEeehhhcccCchHHHHHHHcc-CCCc-----cccccCceEEE-ccCchhhHHHHHHHhcCceeecC
Confidence 4568889999999888888888765 67889986 3442 22334445555 67999999999999999997666
Q ss_pred CcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHH
Q 008477 420 PDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVAD 469 (564)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~ 469 (564)
.. ++.+|++.|++|++-+|++..+.
T Consensus 81 ~i-------------------------~~lgvLeeArff~i~sL~~hle~ 105 (302)
T KOG1665|consen 81 DI-------------------------DCLGVLEEARFFQILSLKDHLED 105 (302)
T ss_pred Cc-------------------------cHHHHHHHhhHHhhHhHHhHHhh
Confidence 66 89999999999999999999887
No 135
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.95 E-value=0.0021 Score=64.73 Aligned_cols=108 Identities=21% Similarity=0.193 Sum_probs=86.1
Q ss_pred CeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCCCCCCcccccCccch
Q 008477 351 KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQVCCNSVTW 430 (564)
Q Consensus 351 ~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~l~~~~~~~~~~~~ 430 (564)
++.+.+|+.++++|++.|+.|+.. +..+ .....+.+.+.++..++.+..|.|+..-... ..
T Consensus 109 ~g~~~~~~~~~~a~~~V~~~~~~~--d~~~-------~~~~~~~~~d~~~~~~~~~~~F~~~~s~~~~-~~--------- 169 (297)
T KOG1987|consen 109 NGFLVAHKLVLVARSEVFEAMGKS--DVFK-------ESSKLITLLEEKPEVLEALNGFQVLPSQVSS-VE--------- 169 (297)
T ss_pred CcEEEcCceEEEeeecceeeeccc--ccch-------hccccccccccchhhHhhhceEEEeccchHH-HH---------
Confidence 566999999999999999999987 2222 2223557788999999999999999765211 11
Q ss_pred hhhcCCCCCCCCCchHHHH---HHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHHHHHHHhhcch
Q 008477 431 LVALGSNLPNFVPFDEQAE---EMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYAAI 496 (564)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~---~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~ 496 (564)
... .++..+++++...|+..|...+...+ ...++...+..+..+++.
T Consensus 170 ----------------~~~~~~~~~a~~f~~~~~~lk~~~~~~l~~~~---~~~~~~~~l~~~~~~~~~ 219 (297)
T KOG1987|consen 170 ----------------RIFEKHPDLAAAFKYKNRHLKLACMPVLLSLI---ETLNVSQSLQEASNYDLK 219 (297)
T ss_pred ----------------HhhcCChhhhhccccccHHHHHHHHHHHHHHH---HhhhhcccHHHhchhHHH
Confidence 233 78889999999999999999999988 788888899989887754
No 136
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription]
Probab=96.81 E-value=0.0072 Score=47.91 Aligned_cols=87 Identities=28% Similarity=0.272 Sum_probs=62.2
Q ss_pred EEEEe-CCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhh-----ccCCCCCC
Q 008477 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYM-----YTDGLKDI 418 (564)
Q Consensus 345 v~~~~-~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~i-----Yt~~~~~l 418 (564)
|.++. ||.+|-.-|-+ +.-|.-.|+||+++..|.|+. ..++.+++++.-+++.+-+|+ |++.-
T Consensus 19 VkLvS~Ddhefiikre~-AmtSgTiraml~gpg~~se~~-------~n~v~f~di~shiLeKvc~Yl~Yk~rY~~~s--- 87 (112)
T KOG3473|consen 19 VKLVSSDDHEFIIKREH-AMTSGTIRAMLSGPGVFSEAE-------KNEVYFRDIPSHILEKVCEYLAYKVRYTNSS--- 87 (112)
T ss_pred eEeecCCCcEEEEeehh-hhhhhHHHHHHcCCccccccc-------cceEEeccchHHHHHHHHHHhhheeeecccc---
Confidence 44444 55555555544 577999999999854455543 479999999999999999987 33331
Q ss_pred CCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccC
Q 008477 419 DPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYL 459 (564)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~ 459 (564)
...|.++...+.+++||.+|+++.
T Consensus 88 -----------------~eiPeF~IppemaleLL~aAn~Le 111 (112)
T KOG3473|consen 88 -----------------TEIPEFDIPPEMALELLMAANYLE 111 (112)
T ss_pred -----------------ccCCCCCCCHHHHHHHHHHhhhhc
Confidence 123455666779999999999875
No 137
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.79 E-value=0.0018 Score=70.73 Aligned_cols=105 Identities=23% Similarity=0.244 Sum_probs=83.9
Q ss_pred CChhHHHHHhcCCHHHHHHHHHc--C--CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCchHHHHc-
Q 008477 33 PNGDVFEASRAGDVDRLRYILES--G--VNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAAL- 107 (564)
Q Consensus 33 ~~~~l~~Aa~~g~~~~v~~Ll~~--g--~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tl~~aa~- 107 (564)
....+..|+..|+...|+..++. . .++|+.|.-|+++|+.|..+.+.+++++|++++... |+.+.+|..
T Consensus 25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~------gdALL~aI~~ 98 (822)
T KOG3609|consen 25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE------GDALLLAIAV 98 (822)
T ss_pred hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc------chHHHHHHHH
Confidence 34556789999999999998872 2 468999999999999999999999999999887654 777666666
Q ss_pred -hHHHHHHHHhccCCCC--------CCCccccccccchhcccccc
Q 008477 108 -NLKVRKLLKAYEARPP--------PLGPLQAALRDTFLGCGANR 143 (564)
Q Consensus 108 -~~~i~~lLl~~~~~~~--------~~~~~~~g~t~lh~A~~~~~ 143 (564)
..+++++++.+..... .......+.||+.+||..++
T Consensus 99 ~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~Nn 143 (822)
T KOG3609|consen 99 GSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNN 143 (822)
T ss_pred HHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcc
Confidence 7788999988754431 12234568899999998887
No 138
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.59 E-value=0.0019 Score=72.27 Aligned_cols=89 Identities=21% Similarity=0.139 Sum_probs=74.4
Q ss_pred HHcCCCccccC--CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCc-hHHHHc--hHHHHHHHHhccCCCCCCCc
Q 008477 53 LESGVNVNARD--QWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGP 127 (564)
Q Consensus 53 l~~g~~~n~~d--~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-l~~aa~--~~~i~~lLl~~~~~~~~~~~ 127 (564)
...|+++|..+ ..|.|+||.|+..|...++++|+++|+++|..|..|++ +|.+.. +...+.+|+++|+++...+
T Consensus 641 ~~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~- 719 (785)
T KOG0521|consen 641 LAHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFD- 719 (785)
T ss_pred hcchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccC-
Confidence 34555555433 46899999999999999999999999999999999997 666666 8888999999999999977
Q ss_pred cccccccchhcccccc
Q 008477 128 LQAALRDTFLGCGANR 143 (564)
Q Consensus 128 ~~~g~t~lh~A~~~~~ 143 (564)
..|++|+++|.+-.+
T Consensus 720 -~~~~~~l~~a~~~~~ 734 (785)
T KOG0521|consen 720 -PDGKLPLDIAMEAAN 734 (785)
T ss_pred -ccCcchhhHHhhhcc
Confidence 899999999866543
No 139
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.50 E-value=0.0047 Score=63.37 Aligned_cols=72 Identities=24% Similarity=0.208 Sum_probs=61.0
Q ss_pred HHHHHHHHHcCCCccc------cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCchHHHHchHHHHHHHHh
Q 008477 46 VDRLRYILESGVNVNA------RDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKA 117 (564)
Q Consensus 46 ~~~v~~Ll~~g~~~n~------~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tl~~aa~~~~i~~lLl~ 117 (564)
...+++|.+++++.|. .+.-..|+||+|+..|...+|.+||+.|+|+.+.|..|.|+...+.+.++...++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~nkdVk~~F~a 481 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSANKDVKSIFIA 481 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccccHHHHHHHHH
Confidence 5678888888877654 34457899999999999999999999999999999999998777778888777764
No 140
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.47 E-value=0.0051 Score=36.87 Aligned_cols=29 Identities=28% Similarity=0.376 Sum_probs=25.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 008477 65 WDSVALYYACLAGHLDAARMLLESGAICS 93 (564)
Q Consensus 65 ~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 93 (564)
.|.||+|+|+..++.+++++|++.|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47899999999999999999998888764
No 141
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised. This family is found in bacteria. This presumed domain is typically between 170 to 303 amino acids in length. The N-terminal half of this family is a BTB-like domain.
Probab=96.45 E-value=0.0065 Score=59.94 Aligned_cols=101 Identities=16% Similarity=0.207 Sum_probs=79.0
Q ss_pred eEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcC-CCCHHHHHHHhHhhccCCCCCCCCcccccCccch
Q 008477 352 KIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH-DLSKETFEKMIEYMYTDGLKDIDPDQVCCNSVTW 430 (564)
Q Consensus 352 ~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~-~v~~~~~~~~l~~iYt~~~~~l~~~~~~~~~~~~ 430 (564)
+.|.|.+-.|..-=.||+..+.. ...+ ......|+|. +.+-.+|+=+++|+..... .++..
T Consensus 14 rdF~C~~~lL~~~M~YF~~~l~~--~~~~------~~~~~~idisVhCDv~iF~WLm~yv~~~~p-~l~~~--------- 75 (317)
T PF11822_consen 14 RDFTCPRDLLVSEMRYFAEYLSR--YIND------SQRWEEIDISVHCDVHIFEWLMRYVKGEPP-SLTPS--------- 75 (317)
T ss_pred eeeeccHHHHHHhhHHHHHHHhh--cccc------cCcCCCcceEEecChhHHHHHHHHhhcCCC-cCCcC---------
Confidence 56999999999999999999953 1111 1122355665 6788999999999999555 78888
Q ss_pred hhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHHHHHHHhhc
Q 008477 431 LVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYA 494 (564)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~ 494 (564)
++..+|.-|++++|++|.+.|-.++.+++ .+|+......+
T Consensus 76 ----------------NvvsIliSS~FL~M~~Lve~cl~y~~~~~--------~~Iv~~~~nl~ 115 (317)
T PF11822_consen 76 ----------------NVVSILISSEFLQMESLVEECLQYCHDHM--------SEIVASPCNLN 115 (317)
T ss_pred ----------------cEEEeEehhhhhccHHHHHHHHHHHHHhH--------HHHHcCCCCcc
Confidence 99999999999999999999999997766 34555555555
No 142
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=96.20 E-value=0.0035 Score=70.08 Aligned_cols=131 Identities=17% Similarity=0.144 Sum_probs=81.0
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCCCCcc
Q 008477 19 DASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILES-GVNVNARDQWDSVALYYACLAGHLDAARMLL-ESGAICSEHT 96 (564)
Q Consensus 19 ~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~-g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll-~~ga~~~~~d 96 (564)
......|+|-+ |+++..+..-.++.+++. |......|.+|...+|+ |..++.+++-+|. .+|..++++|
T Consensus 568 ~~~~~r~~lll--------hL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D 638 (975)
T KOG0520|consen 568 SSVNFRDMLLL--------HLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRD 638 (975)
T ss_pred ccCCCcchHHH--------HHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeeccccccccc
Confidence 33445566666 777777777777777764 65556666666666666 4455555554444 4566777777
Q ss_pred CCCCc-hHHHHc--hHHHHHHHHhccCCC----CCCCccccccccchhcccccc----chhhhhHHhhccccc
Q 008477 97 FDGDR-CHYAAL--NLKVRKLLKAYEARP----PPLGPLQAALRDTFLGCGANR----QFLEEAEVVLGISGV 158 (564)
Q Consensus 97 ~~g~t-l~~aa~--~~~i~~lLl~~~~~~----~~~~~~~~g~t~lh~A~~~~~----~~l~~~~~~~~~~~l 158 (564)
.+|+| +|+|+. +..++..|...|+++ ++....+.|.|+--+|-+.++ .+|-+.....+.+++
T Consensus 639 ~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~~~~~~~ 711 (975)
T KOG0520|consen 639 RNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALSAHLSNL 711 (975)
T ss_pred CCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHHHHHhhc
Confidence 77776 677776 566666666555432 223334667888888877777 355566554455444
No 143
>smart00512 Skp1 Found in Skp1 protein family. Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.
Probab=96.03 E-value=0.023 Score=47.32 Aligned_cols=97 Identities=19% Similarity=0.191 Sum_probs=63.4
Q ss_pred EEEEe-CCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCCCCCCccc
Q 008477 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (564)
Q Consensus 345 v~~~~-~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~l~~~~~ 423 (564)
++++. +|..|.+.+.+. ..|..++.|+... +........|.+++|+..+++.+++|++-..-.......
T Consensus 4 v~L~S~Dg~~f~v~~~~a-~~S~~i~~~l~~~--------~~~~~~~~~Ipl~~v~~~~L~~Vi~yc~~h~~~~~~~~~- 73 (104)
T smart00512 4 IKLISSDGEVFEVEREVA-RQSKTIKAMIEDL--------GVDDENNNPIPLPNVTSKILSKVIEYCEHHVDDPPSVAD- 73 (104)
T ss_pred EEEEeCCCCEEEecHHHH-HHHHHHHHHHHcc--------CcccCCCCCccCCCcCHHHHHHHHHHHHHcccCCCCccc-
Confidence 45554 788999999987 6999999999751 111111258999999999999999999876541111110
Q ss_pred ccCccch---hhhcCCCCCCCCCchHHHHHHHHHhcccCh
Q 008477 424 CCNSVTW---LVALGSNLPNFVPFDEQAEEMFDAASRYLL 460 (564)
Q Consensus 424 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l 460 (564)
...-..| .+. .+.+.+++|+.+|+++++
T Consensus 74 ~~~~~~wD~~F~~---------~d~~~l~dLl~AAnyL~I 104 (104)
T smart00512 74 KDDIPTWDAEFLK---------IDQETLFELILAANYLDI 104 (104)
T ss_pred cccccHHHHHHHc---------CCHHHHHHHHHHHHhhCC
Confidence 0000000 011 235589999999999875
No 144
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....
Probab=95.68 E-value=0.028 Score=45.79 Aligned_cols=80 Identities=15% Similarity=0.170 Sum_probs=54.9
Q ss_pred eEEEecCeeechhhHhhc-ccChhHHHhcccc---ccccccceEEcCCCCHHHHHHHhhhHcc-CCccCC-cccHHHHHH
Q 008477 173 VVFYVQGRPIEAHRVILS-ARSVFFRRKFETD---WRYRNEIRFSREKLSYPALYGLIHFFYS-DRLEIA-VDDMEDLVK 246 (564)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~-a~S~~f~~l~~~~---~~e~~~~~i~l~~v~~~~~~~lL~ylYt-g~~~i~-~~~~~~ll~ 246 (564)
|.+.|||+.|..-+..|. ....+|..++.+. ........+-+ +-++..|+.+|+|+-+ +.+..+ ......+++
T Consensus 1 V~lNVGG~~f~~~~~tL~~~~~s~l~~~~~~~~~~~~~~~~~~~fi-DRdp~~F~~IL~ylr~~~~l~~~~~~~~~~l~~ 79 (94)
T PF02214_consen 1 VRLNVGGTIFETSRSTLTRYPDSLLARLFSGERSDDYDDDDGEYFI-DRDPELFEYILNYLRTGGKLPIPDEICLEELLE 79 (94)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTSHHHTGHGGGEETTTTEEEE-SS-HHHHHHHHHHHHHTSSB---TTS-HHHHHH
T ss_pred CEEEECCEEEEEcHHHHhhCCCChhhhHHhhccccccCCccceEEe-ccChhhhhHHHHHHhhcCccCCCCchhHHHHHH
Confidence 678999999999999987 5567899988854 33344556666 5799999999999999 666553 334555555
Q ss_pred HHhHhcH
Q 008477 247 ICKVCKC 253 (564)
Q Consensus 247 ~a~~c~~ 253 (564)
-|+.+++
T Consensus 80 Ea~fy~l 86 (94)
T PF02214_consen 80 EAEFYGL 86 (94)
T ss_dssp HHHHHT-
T ss_pred HHHHcCC
Confidence 5555433
No 145
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones]
Probab=95.65 E-value=0.11 Score=46.69 Aligned_cols=117 Identities=16% Similarity=0.186 Sum_probs=78.4
Q ss_pred CCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCCCC--CCcc-cccC
Q 008477 350 DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDI--DPDQ-VCCN 426 (564)
Q Consensus 350 ~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~l--~~~~-~~~~ 426 (564)
+|+.|.+-..+. ..|..+.+++... |..... ..|.|+.|+..+|..+++|+|-..-+.. .+.. .|..
T Consensus 13 DG~~f~ve~~~a-~~s~~i~~~~~~~--------~~~~~~-~~IPl~nV~~~iL~kVIewC~~Hk~d~~~~~~~~~~~~~ 82 (162)
T KOG1724|consen 13 DGEIFEVEEEVA-RQSQTISAHMIED--------GCADEN-DPIPLPNVTSKILKKVIEWCKKHKDDDPANPEDKELPEE 82 (162)
T ss_pred CCceeehhHHHH-HHhHHHHHHHHHc--------CCCccC-CccccCccCHHHHHHHHHHHHHccccccccccccccccc
Confidence 688888888776 7888888888641 111111 5799999999999999999999554111 1100 0000
Q ss_pred c--cch---hhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHH
Q 008477 427 S--VTW---LVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCH 485 (564)
Q Consensus 427 ~--~~~---~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~ 485 (564)
. ..| .+. .+...+++|+.+|+++.+++|..+|++.+...+...+++....
T Consensus 83 ~~i~~WD~~Flk---------~d~~tLfdli~AAnyLdi~gLl~~~ck~va~mikgktpeEir~ 137 (162)
T KOG1724|consen 83 TDIPEWDAEFLK---------VDQGTLFDLILAANYLDIKGLLDLTCKTVANMIKGKTPEEIRE 137 (162)
T ss_pred CCccHHHHHHHh---------cCHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHccCCHHHHHH
Confidence 0 000 011 1235899999999999999999999999999885445554433
No 146
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=94.97 E-value=0.028 Score=63.05 Aligned_cols=58 Identities=22% Similarity=0.222 Sum_probs=42.1
Q ss_pred hhHHHHHhcCCHHHHHHHHH-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 008477 35 GDVFEASRAGDVDRLRYILE-SGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (564)
Q Consensus 35 ~~l~~Aa~~g~~~~v~~Ll~-~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 93 (564)
..+|. |..++++..-+++. .|..++.+|..||||||||+..|+..++.-|.+.|++..
T Consensus 610 gV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~ 668 (975)
T KOG0520|consen 610 GVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPG 668 (975)
T ss_pred ChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccc
Confidence 33476 44556665555554 778888888888888888888888888888887776655
No 147
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only]
Probab=94.94 E-value=0.098 Score=53.23 Aligned_cols=93 Identities=26% Similarity=0.299 Sum_probs=68.5
Q ss_pred EEEEeCCeEEecchhhhhccc--HHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCCCCCCcc
Q 008477 345 VCVRVDKKIFRCHQVVLASRS--EYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ 422 (564)
Q Consensus 345 v~~~~~~~~~~~Hk~iL~arS--~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~l~~~~ 422 (564)
|.|-|+|+.|...+.-|+-.. .+|.+++++ .|...+. +...|-| |=+|+.|..+|+|+-|+++ ++..-
T Consensus 13 V~lNVGGriF~Ts~qTL~~~~~DSffsaL~s~--~~~s~~~-----~~~~iFI-DRDPdlFaviLn~LRTg~L-~~~g~- 82 (465)
T KOG2714|consen 13 VKLNVGGRIFETSAQTLTWIPRDSFFSALLSG--RINSLKD-----ESGAIFI-DRDPDLFAVILNLLRTGDL-DASGV- 82 (465)
T ss_pred EEEecCceEEecchhhhhcCCcchHHHHHhcC--ccccccC-----CCCceEe-cCCchHHHHHHHHHhcCCC-CCccC-
Confidence 568899999999998887655 699999987 6654433 2234555 5689999999999999999 45443
Q ss_pred cccCccchhhhcCCCCCCCCCchHHHHHHH-HHhcccChhhHHH---HHHHHH
Q 008477 423 VCCNSVTWLVALGSNLPNFVPFDEQAEEMF-DAASRYLLFPLKR---AVADVL 471 (564)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll-~~A~~~~l~~L~~---~c~~~l 471 (564)
....++ .=|.+|+++.|.+ +|+.-+
T Consensus 83 ------------------------~~~~llhdEA~fYGl~~llrrl~~~~~~F 111 (465)
T KOG2714|consen 83 ------------------------FPERLLHDEAMFYGLTPLLRRLTLCEELF 111 (465)
T ss_pred ------------------------chhhhhhhhhhhcCcHHHHHHhhcCcccc
Confidence 334444 4899999999876 455443
No 148
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism]
Probab=94.73 E-value=0.16 Score=48.19 Aligned_cols=78 Identities=15% Similarity=0.234 Sum_probs=58.4
Q ss_pred eEEEecCeeechhhHhhcccChhHHHhcccccc-c-cccceEEcCCCCHHHHHHHhhhHccCCccCCcc--cHHHHHHHH
Q 008477 173 VVFYVQGRPIEAHRVILSARSVFFRRKFETDWR-Y-RNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD--DMEDLVKIC 248 (564)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~a~S~~f~~l~~~~~~-e-~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~--~~~~ll~~a 248 (564)
|.+.|||..|.-.+.-|.....+|+.|+..++. + .....|-+ +=+|.-|..+|.||-.|.+.++.. .+.+|+.=|
T Consensus 7 vkLnvGG~~F~Tsk~TLtk~dg~fk~m~e~~i~~~~d~s~~IFI-DRSpKHF~~ILNfmRdGdv~LPe~~kel~El~~EA 85 (230)
T KOG2716|consen 7 VKLNVGGTIFKTSKSTLTKFDGFFKTMLETDIPVEKDESGCIFI-DRSPKHFDTILNFMRDGDVDLPESEKELKELLREA 85 (230)
T ss_pred EEEecCCeEEEeehhhhhhhhhHHHHHhhcCCccccCCcCcEEe-cCChhHHHHHHHhhhcccccCccchHHHHHHHHHH
Confidence 567899999999999999999999999998763 1 22334555 678999999999999998876544 334444444
Q ss_pred hHh
Q 008477 249 KVC 251 (564)
Q Consensus 249 ~~c 251 (564)
+++
T Consensus 86 ~fY 88 (230)
T KOG2716|consen 86 EFY 88 (230)
T ss_pred HHh
Confidence 433
No 149
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.72 E-value=0.063 Score=59.11 Aligned_cols=59 Identities=17% Similarity=0.258 Sum_probs=38.6
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 008477 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES 88 (564)
Q Consensus 15 g~~v~~~d~~g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ 88 (564)
...+|+.|--|+++| +.|..+.+.++++.|+..+..+ .-+|.+|...|..++|+.++.+
T Consensus 52 ~lninc~d~lGr~al--------~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~ 110 (822)
T KOG3609|consen 52 KLNINCRDPLGRLAL--------HIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVH 110 (822)
T ss_pred ccchhccChHhhhce--------ecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhc
Confidence 367889999999999 7777777777777776665433 1245555555555555555544
No 150
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a POZ domain with a core structure consisting of beta(2)/alpha(2)/beta(2)/alpha(2) in two layers, alpha/beta. This domain is found at the N-terminal of SKP1 proteins [] as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. ; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 1LM8_C 2XAI_E 1VCB_E 3ZRC_K 3ZRF_E 3DCG_B 2C9W_C 1LQB_B 2IZV_C 1HV2_A ....
Probab=94.71 E-value=0.13 Score=38.23 Aligned_cols=56 Identities=21% Similarity=0.258 Sum_probs=43.1
Q ss_pred EEEEe-CCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhcc
Q 008477 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT 412 (564)
Q Consensus 345 v~~~~-~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt 412 (564)
|+++. ||..|.+.+.+. ..|..++.|+... + ... ..|.+++|+..+++.+++|++-
T Consensus 3 v~L~SsDg~~f~V~~~~a-~~S~~i~~ml~~~--------~--~~~-~~Ipl~~v~~~~L~kViewc~~ 59 (62)
T PF03931_consen 3 VKLVSSDGQEFEVSREAA-KQSKTIKNMLEDL--------G--DED-EPIPLPNVSSRILKKVIEWCEH 59 (62)
T ss_dssp EEEEETTSEEEEEEHHHH-TTSHHHHHHHHCT--------C--CCG-TEEEETTS-HHHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEeeHHHH-HHhHHHHHHHhhh--------c--ccc-cccccCccCHHHHHHHHHHHHh
Confidence 44544 789999999988 5999999999751 1 111 1799999999999999999874
No 151
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.69 E-value=0.037 Score=32.82 Aligned_cols=28 Identities=25% Similarity=0.640 Sum_probs=24.7
Q ss_pred CCCCCCCCCChhHHHHHhcCCHHHHHHHHHcCCCcc
Q 008477 25 SSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVN 60 (564)
Q Consensus 25 g~tpL~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~n 60 (564)
|.||+ |+|+..|+.++++.|+..|.+++
T Consensus 2 ~~~~l--------~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPL--------HLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHH--------HHHHHcCCHHHHHHHHHcCCCCC
Confidence 56777 99999999999999999988764
No 152
>COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones]
Probab=94.65 E-value=0.55 Score=39.58 Aligned_cols=120 Identities=20% Similarity=0.170 Sum_probs=80.7
Q ss_pred EEEE-eCCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCCCCCCccc
Q 008477 345 VCVR-VDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (564)
Q Consensus 345 v~~~-~~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~l~~~~~ 423 (564)
+.+. .+|..|.+.+.|- -||-..+.|+.. ..+. ...|..+.|+..+|..+++|+--+.- .++++..
T Consensus 4 i~l~s~dge~F~vd~~iA-erSiLikN~l~d---~~~~--------n~p~p~pnVrSsvl~kv~ew~ehh~~-s~sede~ 70 (158)
T COG5201 4 IELESIDGEIFRVDENIA-ERSILIKNMLCD---STAC--------NYPIPAPNVRSSVLMKVQEWMEHHTS-SLSEDEN 70 (158)
T ss_pred eEEEecCCcEEEehHHHH-HHHHHHHHHhcc---cccc--------CCCCcccchhHHHHHHHHHHHHhccc-cCCCccC
Confidence 4444 3788888888764 788889998863 2221 23466779999999999999987665 3444310
Q ss_pred ccCccchhhhcCCCCCCCCC------chHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHH
Q 008477 424 CCNSVTWLVALGSNLPNFVP------FDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAEL 483 (564)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~ 483 (564)
-.++-. .-...+|+ +-+.++++.-+|+++.++.|.+.|+..+...+...+++..
T Consensus 71 ----d~~~rk--s~p~D~wdr~Fm~vDqemL~eI~laaNYL~ikpLLd~gCKivaemirgkSpeei 130 (158)
T COG5201 71 ----DLEIRK--SKPSDFWDRFFMEVDQEMLLEICLAANYLEIKPLLDLGCKIVAEMIRGKSPEEI 130 (158)
T ss_pred ----hHhhhc--cCCccHHHHHHHHhhHHHHHHHHHhhccccchHHHHHHHHHHHHHHccCCHHHH
Confidence 000000 00001221 3467889999999999999999999999999876666643
No 153
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a POZ domain with a core structure consisting of beta(2)/alpha(2)/beta(2)/alpha(2) in two layers, alpha/beta. This domain is found at the N-terminal of SKP1 proteins [] as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. ; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 1LM8_C 2XAI_E 1VCB_E 3ZRC_K 3ZRF_E 3DCG_B 2C9W_C 1LQB_B 2IZV_C 1HV2_A ....
Probab=94.44 E-value=0.11 Score=38.70 Aligned_cols=55 Identities=16% Similarity=0.115 Sum_probs=42.5
Q ss_pred eEEEe-cCeeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHc
Q 008477 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFY 230 (564)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylY 230 (564)
|+++. +|+.|.+.+.+. ..|..++.|+.+...+.. .|++++++..+++.+++|++
T Consensus 3 v~L~SsDg~~f~V~~~~a-~~S~~i~~ml~~~~~~~~--~Ipl~~v~~~~L~kViewc~ 58 (62)
T PF03931_consen 3 VKLVSSDGQEFEVSREAA-KQSKTIKNMLEDLGDEDE--PIPLPNVSSRILKKVIEWCE 58 (62)
T ss_dssp EEEEETTSEEEEEEHHHH-TTSHHHHHHHHCTCCCGT--EEEETTS-HHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEeeHHHH-HHhHHHHHHHhhhccccc--ccccCccCHHHHHHHHHHHH
Confidence 45554 788898888776 589999999975333322 79999999999999999996
No 154
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription]
Probab=92.66 E-value=0.34 Score=38.68 Aligned_cols=78 Identities=10% Similarity=0.077 Sum_probs=58.5
Q ss_pred eEEEe-cCeeechhhHhhcccChhHHHhccccc--cccccceEEcCCCCHHHHHHHhhhH-----ccCC------ccCCc
Q 008477 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDW--RYRNEIRFSREKLSYPALYGLIHFF-----YSDR------LEIAV 238 (564)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~a~S~~f~~l~~~~~--~e~~~~~i~l~~v~~~~~~~lL~yl-----Ytg~------~~i~~ 238 (564)
|.++. +|..|-.-| -+|.-|+-+++||.+.. .+....++.+++++..+++.+.+|+ |++. .+|++
T Consensus 19 VkLvS~Ddhefiikr-e~AmtSgTiraml~gpg~~se~~~n~v~f~di~shiLeKvc~Yl~Yk~rY~~~s~eiPeF~Ipp 97 (112)
T KOG3473|consen 19 VKLVSSDDHEFIIKR-EHAMTSGTIRAMLSGPGVFSEAEKNEVYFRDIPSHILEKVCEYLAYKVRYTNSSTEIPEFDIPP 97 (112)
T ss_pred eEeecCCCcEEEEee-hhhhhhhHHHHHHcCCccccccccceEEeccchHHHHHHHHHHhhheeeeccccccCCCCCCCH
Confidence 55555 445554433 35677899999999654 4555778999999999999999998 6665 46788
Q ss_pred ccHHHHHHHHhHh
Q 008477 239 DDMEDLVKICKVC 251 (564)
Q Consensus 239 ~~~~~ll~~a~~c 251 (564)
+-..+|+.+|+..
T Consensus 98 emaleLL~aAn~L 110 (112)
T KOG3473|consen 98 EMALELLMAANYL 110 (112)
T ss_pred HHHHHHHHHhhhh
Confidence 8899999888654
No 155
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a dimerisation domain found at the C-terminal of SKP1 proteins [], as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. This domain is multi-helical in structure, and consists of an interlocked herterodimer in F-box proteins.; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 2P1O_A 3OGL_G 3OGM_A 3C6O_A 2P1N_A 2P1Q_A 3OGK_I 3C6N_A 3C6P_A 2P1P_A ....
Probab=92.16 E-value=0.27 Score=38.48 Aligned_cols=50 Identities=12% Similarity=0.165 Sum_probs=38.3
Q ss_pred hHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHHHHHHHhhc
Q 008477 445 DEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYA 494 (564)
Q Consensus 445 ~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~ 494 (564)
.+.+++|+.+|+++++++|...|...+...+...+++.+..++.+..-+.
T Consensus 13 ~~~L~~l~~AA~yL~I~~L~~~~~~~iA~~i~gks~eeir~~fgi~~d~t 62 (78)
T PF01466_consen 13 NDELFDLLNAANYLDIKGLLDLCCKYIANMIKGKSPEEIRKYFGIENDLT 62 (78)
T ss_dssp HHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHTTS-HHHHHHHHT---TSS
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHhcCCCHHHHHHHcCCCCCCC
Confidence 34899999999999999999999999999997667777777776665444
No 156
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only]
Probab=91.05 E-value=0.72 Score=47.19 Aligned_cols=66 Identities=15% Similarity=0.152 Sum_probs=50.7
Q ss_pred eEEEecCeeechhhHhhc--ccChhHHHhccccccccccce--EEcCCCCHHHHHHHhhhHccCCccCCcc
Q 008477 173 VVFYVQGRPIEAHRVILS--ARSVFFRRKFETDWRYRNEIR--FSREKLSYPALYGLIHFFYSDRLEIAVD 239 (564)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~--a~S~~f~~l~~~~~~e~~~~~--i~l~~v~~~~~~~lL~ylYtg~~~i~~~ 239 (564)
|.|.|+|+.|.--+.-|+ .+-.+|.+++.+.|...+... |-+ +=+|+.|..+|.|+-||++++..-
T Consensus 13 V~lNVGGriF~Ts~qTL~~~~~DSffsaL~s~~~~s~~~~~~~iFI-DRDPdlFaviLn~LRTg~L~~~g~ 82 (465)
T KOG2714|consen 13 VKLNVGGRIFETSAQTLTWIPRDSFFSALLSGRINSLKDESGAIFI-DRDPDLFAVILNLLRTGDLDASGV 82 (465)
T ss_pred EEEecCceEEecchhhhhcCCcchHHHHHhcCccccccCCCCceEe-cCCchHHHHHHHHHhcCCCCCccC
Confidence 668899999976666654 445899999988776554333 444 678999999999999999987443
No 157
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=90.87 E-value=0.24 Score=51.28 Aligned_cols=48 Identities=17% Similarity=0.298 Sum_probs=40.7
Q ss_pred hHHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 008477 36 DVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (564)
Q Consensus 36 ~l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll 86 (564)
.||+|+..|.-.+|.++|+.|+|+..+|..|.||..++. +.++-..++
T Consensus 433 ~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F~ 480 (591)
T KOG2505|consen 433 FLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIFI 480 (591)
T ss_pred HHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHHH
Confidence 349999999999999999999999999999999998876 445544444
No 158
>smart00512 Skp1 Found in Skp1 protein family. Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.
Probab=90.01 E-value=0.86 Score=37.83 Aligned_cols=58 Identities=14% Similarity=0.116 Sum_probs=45.1
Q ss_pred eEEEe-cCeeechhhHhhcccChhHHHhccccccc-cccceEEcCCCCHHHHHHHhhhHcc
Q 008477 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRY-RNEIRFSREKLSYPALYGLIHFFYS 231 (564)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e-~~~~~i~l~~v~~~~~~~lL~ylYt 231 (564)
|+++. +|..|.+.+.+. ..|..++.|+.+...+ .....|++++++..+++.+++|++-
T Consensus 4 v~L~S~Dg~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~Ipl~~v~~~~L~~Vi~yc~~ 63 (104)
T smart00512 4 IKLISSDGEVFEVEREVA-RQSKTIKAMIEDLGVDDENNNPIPLPNVTSKILSKVIEYCEH 63 (104)
T ss_pred EEEEeCCCCEEEecHHHH-HHHHHHHHHHHccCcccCCCCCccCCCcCHHHHHHHHHHHHH
Confidence 55554 788899988876 6899999999753222 2235799999999999999999975
No 159
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO). BTB (broad-complex, tramtrack and bric a brac) is a Kelch related domain, also known as the POZ domain []. BTB proteins are divided into subgroups depending on what domain lies at the C terminus. Despite the divergence in sequences, the BTB fold is highly conserved. BTB-Kelch proteins have Kelch repeats that form a beta-propeller that can interact with actin filaments []. BTB and C-terminal Kelch (BACK) together constitute a novel conserved domain, which is thought to have a possible role in substrate orientation in Cullin3-based E3 ligase complexes. Four domains, namely the BTB domain, a kelch domain, a BACK domain, and an intervening region (IVR) make up the aryl hydrocarbon receptor (AHR); a ligand-activated transcription factor []. This entry represents the domain associated with BTB and Kelch.; PDB: 3HVE_A 2EQX_A 3I3N_A 4AP2_A 4APF_A.
Probab=88.30 E-value=0.35 Score=39.76 Aligned_cols=43 Identities=19% Similarity=0.255 Sum_probs=34.2
Q ss_pred HHHHHHHHHHcCcHHHHHHHHHHHhhcCC-C-CCCCccchhHHHH
Q 008477 263 ELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PEEDRLPAALSRI 305 (564)
Q Consensus 263 ~l~~~~~a~~~~~~~L~~~~~~~i~~~~~-v-~~~~~l~~~l~~~ 305 (564)
|++++.+|..+++..|.+.|.+||..||. + ..++|+..+...+
T Consensus 1 C~~i~~~A~~~~~~~L~~~~~~~i~~nf~~v~~~~~f~~L~~~~l 45 (103)
T PF07707_consen 1 CLSIYRLAEKYGLEELAEACLRFIAKNFNEVSKSDEFLELPFDQL 45 (103)
T ss_dssp HHHHHHHHHHTT-HHHHHHHHHHHHHTHHHHTTSHHHHCS-HHHH
T ss_pred ChhHHHHHHHcChHHHHHHHHHHHHHHHHHHccchhhhcCCHHHH
Confidence 68899999999999999999999999998 5 5666655555444
No 160
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised. This family is found in bacteria. This presumed domain is typically between 170 to 303 amino acids in length. The N-terminal half of this family is a BTB-like domain.
Probab=87.54 E-value=0.78 Score=45.58 Aligned_cols=71 Identities=13% Similarity=0.180 Sum_probs=55.0
Q ss_pred eeechhhHhhcccChhHHHhccc---cccccccceEEcCCCCHHHHHHHhhhHccCCccCCcccHHHHHHHHhHh
Q 008477 180 RPIEAHRVILSARSVFFRRKFET---DWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKICKVC 251 (564)
Q Consensus 180 ~~~~~Hk~iL~a~S~~f~~l~~~---~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~a~~c 251 (564)
+.|.|.+-+|...=.||+..+.. .-.+.....|.+ +.+..+|+=+++|+......++++|+..++.-+++.
T Consensus 14 rdF~C~~~lL~~~M~YF~~~l~~~~~~~~~~~~idisV-hCDv~iF~WLm~yv~~~~p~l~~~NvvsIliSS~FL 87 (317)
T PF11822_consen 14 RDFTCPRDLLVSEMRYFAEYLSRYINDSQRWEEIDISV-HCDVHIFEWLMRYVKGEPPSLTPSNVVSILISSEFL 87 (317)
T ss_pred eeeeccHHHHHHhhHHHHHHHhhcccccCcCCCcceEE-ecChhHHHHHHHHhhcCCCcCCcCcEEEeEehhhhh
Confidence 56999999999999999999964 333333444555 688899999999999988888888877666666444
No 161
>KOG2715 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=87.43 E-value=3.4 Score=36.73 Aligned_cols=104 Identities=18% Similarity=0.114 Sum_probs=73.7
Q ss_pred CCCccEEEEeCCeEEecchhhhhcccHHHHHHh-cCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCCCC
Q 008477 340 DDLADVCVRVDKKIFRCHQVVLASRSEYFKARL-SRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDI 418 (564)
Q Consensus 340 ~~~~Dv~~~~~~~~~~~Hk~iL~arS~~F~~~~-~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~l 418 (564)
+....|.+-|||+.|-.-|.-|..-+.-|-.-| +..++.. .+....--.+-+=+|..|..+|+|+-.|++ -+
T Consensus 18 g~s~wVRlNVGGt~f~TtktTl~rdp~sFl~rl~q~~~~l~------sdrDetGAYlIDRDP~~FgpvLNylRhgkl-vl 90 (210)
T KOG2715|consen 18 GVSLWVRLNVGGTVFLTTKTTLPRDPKSFLYRLCQREKDLP------SDRDETGAYLIDRDPFYFGPVLNYLRHGKL-VL 90 (210)
T ss_pred CceEEEEEecCCEEEEeeeeccccCcHHHHHHHHhcccCCC------CCccccCceEeccCcchHHHHHHHHhcchh-hh
Confidence 444678889999999999999988775665555 3311111 011112223336689999999999999998 56
Q ss_pred CCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhc
Q 008477 419 DPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHL 475 (564)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l 475 (564)
+.- .-..+|.-|++|.++.|..+..+.|....
T Consensus 91 ~~l-------------------------~eeGvL~EAefyn~~~li~likd~i~dRd 122 (210)
T KOG2715|consen 91 NKL-------------------------SEEGVLEEAEFYNDPSLIQLIKDRIQDRD 122 (210)
T ss_pred hhh-------------------------hhhccchhhhccCChHHHHHHHHHHHHHh
Confidence 554 44578889999999999998888777654
No 162
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=85.52 E-value=2.6 Score=39.36 Aligned_cols=90 Identities=11% Similarity=0.071 Sum_probs=63.1
Q ss_pred CCeEEEecCeeechhhHhhccc--ChhHHHhccccc---cccccceEEcCCCCHHHHHHHhhhHccCCccCCc-ccHHHH
Q 008477 171 PDVVFYVQGRPIEAHRVILSAR--SVFFRRKFETDW---RYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAV-DDMEDL 244 (564)
Q Consensus 171 ~Dv~~~v~~~~~~~Hk~iL~a~--S~~f~~l~~~~~---~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~-~~~~~l 244 (564)
+-|.+.++|+.|.--..-+..| -+.+..||.+.- ++.....+-+ +-++..|+.+|.|+-.|+++... -+...+
T Consensus 9 ~~vrlnigGk~f~TTidTlv~rEPDSMLa~MF~~~g~~~~~d~kGa~lI-DRsp~yFepIlNyLr~Gq~~~~s~i~~lgv 87 (302)
T KOG1665|consen 9 SMVRLNIGGKKFCTTIDTLVIREPDSMLAAMFSGRGAMCQEDKKGAVLI-DRSPKYFEPILNYLRDGQIPSLSDIDCLGV 87 (302)
T ss_pred hhheeecCCeEEEEeehhhcccCchHHHHHHHccCCCccccccCceEEE-ccCchhhHHHHHHHhcCceeecCCccHHHH
Confidence 3577888998886544444444 456888997532 2333444444 67899999999999999986543 478888
Q ss_pred HHHHhHhcHHHHHHHHH
Q 008477 245 VKICKVCKCESLQRIIE 261 (564)
Q Consensus 245 l~~a~~c~~~~L~~~l~ 261 (564)
++.|+++++-.|+.+++
T Consensus 88 LeeArff~i~sL~~hle 104 (302)
T KOG1665|consen 88 LEEARFFQILSLKDHLE 104 (302)
T ss_pred HHHhhHHhhHhHHhHHh
Confidence 88888886666666655
No 163
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=85.48 E-value=0.69 Score=46.43 Aligned_cols=110 Identities=17% Similarity=0.102 Sum_probs=69.3
Q ss_pred cCeeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHccCCccCCcccHH---HHHHHH------
Q 008477 178 QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDME---DLVKIC------ 248 (564)
Q Consensus 178 ~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~---~ll~~a------ 248 (564)
.++.+.+|+.+++++++.|+.++.....+.....+.+.+..+..++.+..|.|+..-....+... ..+..+
T Consensus 108 ~~g~~~~~~~~~~a~~~V~~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~F~~~~s~~~~~~~~~~~~~~~a~~f~~~~~ 187 (297)
T KOG1987|consen 108 SNGFLVAHKLVLVARSEVFEAMGKSDVFKESSKLITLLEEKPEVLEALNGFQVLPSQVSSVERIFEKHPDLAAAFKYKNR 187 (297)
T ss_pred cCcEEEcCceEEEeeecceeeecccccchhccccccccccchhhHhhhceEEEeccchHHHHHhhcCChhhhhccccccH
Confidence 35679999999999999999999876655555555777889999999999999965432222221 333333
Q ss_pred ---hHhcHHHHHHHHH--HHHHHHHHHHHcCcHHHHHHHHHHHhh
Q 008477 249 ---KVCKCESLQRIIE--KELIHQKYAEYKALRDVDNSQKRFILQ 288 (564)
Q Consensus 249 ---~~c~~~~L~~~l~--~~l~~~~~a~~~~~~~L~~~~~~~i~~ 288 (564)
..| .+.+...++ +....+..+..+....+...+..++..
T Consensus 188 ~lk~~~-~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 231 (297)
T KOG1987|consen 188 HLKLAC-MPVLLSLIETLNVSQSLQEASNYDLKEAKSALTYVIAA 231 (297)
T ss_pred HHHHHH-HHHHHHHHHhhhhcccHHHhchhHHHHHHHHHHHHHhc
Confidence 233 333333333 112334455555555556666656554
No 164
>smart00875 BACK BTB And C-terminal Kelch. The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues.
Probab=79.61 E-value=1.5 Score=35.58 Aligned_cols=43 Identities=26% Similarity=0.358 Sum_probs=34.1
Q ss_pred HHHHHHHHHHcCcHHHHHHHHHHHhhcCC-C-CCCCccchhHHHH
Q 008477 263 ELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PEEDRLPAALSRI 305 (564)
Q Consensus 263 ~l~~~~~a~~~~~~~L~~~~~~~i~~~~~-v-~~~~~l~~~l~~~ 305 (564)
|++++.+|+.|++..|.+.|.+|+.+||. + ..++|+..+...+
T Consensus 1 c~~i~~~a~~~~~~~L~~~~~~~i~~nf~~~~~~~~f~~L~~~~l 45 (101)
T smart00875 1 CLGIRRFAELYGLEELLEKALRFILKNFLEVAQSEEFLELSLEQL 45 (101)
T ss_pred CHhHHHHHHHhChHHHHHHHHHHHHHHHHHHhcCcHHhcCCHHHH
Confidence 46788899999999999999999999998 5 5566655554443
No 165
>KOG1778 consensus CREB binding protein/P300 and related TAZ Zn-finger proteins [Transcription]
Probab=78.48 E-value=1.6 Score=43.84 Aligned_cols=116 Identities=16% Similarity=0.147 Sum_probs=86.9
Q ss_pred cEEEEeCCeEEecchhhhhcccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCCCCCCccc
Q 008477 344 DVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (564)
Q Consensus 344 Dv~~~~~~~~~~~Hk~iL~arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~l~~~~~ 423 (564)
|.++..++..+++|+.+|...|+.|..+... . -..+....+.+..++...+..+.+++|.. + +--+.
T Consensus 28 ~~~~~~~~~~~~~~s~~l~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~c~~~~~~~~~l~~~-~-ek~e~-- 94 (319)
T KOG1778|consen 28 VEIVTDVKDLIPAHSLVLGPASPVFKKVLKQ--P-------CRKSLVKGNKILGVPCKAVNVFIRFLYSS-L-EKHEM-- 94 (319)
T ss_pred hhhhhhhhhhhHHHHhcccccchHHHHHHhh--h-------cchhhhhcceeecccccccchhhhhhccc-h-hhhHH--
Confidence 3344446678999999999999999988764 2 11123346667788889999999999998 4 22222
Q ss_pred ccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHHHHhhccccChHHHHHHHHHHHhhcc
Q 008477 424 CCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYAA 495 (564)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~ 495 (564)
......++.+...|.++.++..|...+..-+ ++..++...+..+..++.
T Consensus 95 ---------------------~~~~ihll~~~~~~~v~~~~~d~~~~~~~~~--~~~r~~flvl~~~~~~~~ 143 (319)
T KOG1778|consen 95 ---------------------VFFDIHLLALSHVYVVPQPKADCDPILECGL--FDKRNVFLVLQLAEHCDF 143 (319)
T ss_pred ---------------------HHHHHHHHhhhhhhhccCccccCCccccchh--hhhHHHHHHHHHHHhccc
Confidence 2377788888889999999999988887633 377889889988888883
No 166
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=78.05 E-value=4.5 Score=38.05 Aligned_cols=87 Identities=15% Similarity=0.182 Sum_probs=45.7
Q ss_pred ChhHHHHHhcCCHHHHHHHHHc----CCCccccCCCCCcHHHHHHH--cCCHHHHHHHHhCC-CCCCC---ccCCCCchH
Q 008477 34 NGDVFEASRAGDVDRLRYILES----GVNVNARDQWDSVALYYACL--AGHLDAARMLLESG-AICSE---HTFDGDRCH 103 (564)
Q Consensus 34 ~~~l~~Aa~~g~~~~v~~Ll~~----g~~~n~~d~~g~TpL~~A~~--~g~~~~v~~Ll~~g-a~~~~---~d~~g~tl~ 103 (564)
.+++.+|..++..+++-+|+.. ..|+-. -..+.--+-|+.. .....+.++.+++| +++|. +.+.|.|.+
T Consensus 180 ~~Am~~si~~~K~dva~~lls~f~ft~~dv~~-~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtML 258 (284)
T PF06128_consen 180 HQAMWLSIGNAKEDVALYLLSKFNFTKQDVAS-MEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTML 258 (284)
T ss_pred HHHHHHHhcccHHHHHHHHHhhcceecchhhh-cCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHH
Confidence 3445666666666666666652 112111 1112223434332 23456677777776 56663 344566644
Q ss_pred HHHc---hHHHHHHHHhccCC
Q 008477 104 YAAL---NLKVRKLLKAYEAR 121 (564)
Q Consensus 104 ~aa~---~~~i~~lLl~~~~~ 121 (564)
..|. +.+++.+|+++|+-
T Consensus 259 DNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 259 DNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HhHHhcCcHHHHHHHHHcCcc
Confidence 4444 66777777777763
No 167
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=67.33 E-value=10 Score=29.29 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=34.3
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 008477 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES 88 (564)
Q Consensus 37 l~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ 88 (564)
+..|..+|+.++++.+++.+ .++ ...+..|+..-+.+++++|++.
T Consensus 10 l~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 10 LEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 47888899999998888654 221 3467888888888888888865
No 168
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones]
Probab=63.69 E-value=53 Score=29.61 Aligned_cols=109 Identities=11% Similarity=0.046 Sum_probs=64.0
Q ss_pred cCeeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHccCCcc---CCcc-cHHHHHHHHhHhcH
Q 008477 178 QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLE---IAVD-DMEDLVKICKVCKC 253 (564)
Q Consensus 178 ~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~---i~~~-~~~~ll~~a~~c~~ 253 (564)
+|+.|.+-..++ ..|..+..++...--......|+++.|+..+|..+++|++.-.-+ ...+ ...+...+. ....
T Consensus 13 DG~~f~ve~~~a-~~s~~i~~~~~~~~~~~~~~~IPl~nV~~~iL~kVIewC~~Hk~d~~~~~~~~~~~~~~~i~-~WD~ 90 (162)
T KOG1724|consen 13 DGEIFEVEEEVA-RQSQTISAHMIEDGCADENDPIPLPNVTSKILKKVIEWCKKHKDDDPANPEDKELPEETDIP-EWDA 90 (162)
T ss_pred CCceeehhHHHH-HHhHHHHHHHHHcCCCccCCccccCccCHHHHHHHHHHHHHcccccccccccccccccCCcc-HHHH
Confidence 677777766554 566777777653211111157899999999999999999972211 1010 000000011 1114
Q ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHhh
Q 008477 254 ESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQ 288 (564)
Q Consensus 254 ~~L~~~l~~~l~~~~~a~~~~~~~L~~~~~~~i~~ 288 (564)
+|++-.-...+++...|...+.+.|...+.+.+..
T Consensus 91 ~Flk~d~~tLfdli~AAnyLdi~gLl~~~ck~va~ 125 (162)
T KOG1724|consen 91 EFLKVDQGTLFDLILAANYLDIKGLLDLTCKTVAN 125 (162)
T ss_pred HHHhcCHHHHHHHHHHhhhcccHHHHHHHHHHHHH
Confidence 55552222456777778888888888888777654
No 169
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO). BTB (broad-complex, tramtrack and bric a brac) is a Kelch related domain, also known as the POZ domain []. BTB proteins are divided into subgroups depending on what domain lies at the C terminus. Despite the divergence in sequences, the BTB fold is highly conserved. BTB-Kelch proteins have Kelch repeats that form a beta-propeller that can interact with actin filaments []. BTB and C-terminal Kelch (BACK) together constitute a novel conserved domain, which is thought to have a possible role in substrate orientation in Cullin3-based E3 ligase complexes. Four domains, namely the BTB domain, a kelch domain, a BACK domain, and an intervening region (IVR) make up the aryl hydrocarbon receptor (AHR); a ligand-activated transcription factor []. This entry represents the domain associated with BTB and Kelch.; PDB: 3HVE_A 2EQX_A 3I3N_A 4AP2_A 4APF_A.
Probab=54.89 E-value=5.2 Score=32.58 Aligned_cols=27 Identities=19% Similarity=0.242 Sum_probs=21.0
Q ss_pred HHHHHHhcccChhhHHHHHHHHHHhhc
Q 008477 449 EEMFDAASRYLLFPLKRAVADVLLLHL 475 (564)
Q Consensus 449 ~~ll~~A~~~~l~~L~~~c~~~l~~~l 475 (564)
++++.+|+.|+++.|...|.++|.++.
T Consensus 2 ~~i~~~A~~~~~~~L~~~~~~~i~~nf 28 (103)
T PF07707_consen 2 LSIYRLAEKYGLEELAEACLRFIAKNF 28 (103)
T ss_dssp HHHHHHHHHTT-HHHHHHHHHHHHHTH
T ss_pred hhHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 567888888888888888888887765
No 170
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=51.10 E-value=29 Score=31.79 Aligned_cols=23 Identities=22% Similarity=0.073 Sum_probs=11.0
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCC
Q 008477 71 YYACLAGHLDAARMLLESGAICS 93 (564)
Q Consensus 71 ~~A~~~g~~~~v~~Ll~~ga~~~ 93 (564)
.+|+..|-.+.+.-.+++|.+++
T Consensus 148 ~~a~~kgll~F~letlkygg~~~ 170 (192)
T PF03158_consen 148 EKAAAKGLLPFVLETLKYGGNVD 170 (192)
T ss_pred HHHHHCCCHHHHHHHHHcCCccc
Confidence 34445555554444444544443
No 171
>KOG2723 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=49.69 E-value=56 Score=31.04 Aligned_cols=98 Identities=15% Similarity=0.058 Sum_probs=60.0
Q ss_pred CCccEEEEeCCeEEecchhh-hh-cccHHHHHHhcCCccccccCCCCCCCCCCcEEcCCCCHHHHHHHhHhhccCCCCCC
Q 008477 341 DLADVCVRVDKKIFRCHQVV-LA-SRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDI 418 (564)
Q Consensus 341 ~~~Dv~~~~~~~~~~~Hk~i-L~-arS~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~l 418 (564)
.+.|++..-.|..++.|+.- |. -.-....+||++ +. ....+......| +=+-..|+.||+|+-+... .+
T Consensus 6 ~~~~~v~lnvGG~~ytt~l~tL~~~~ds~L~~~f~~---~~----~~~~d~~g~~fI-DRDG~lFRyvL~~LRt~~l-~l 76 (221)
T KOG2723|consen 6 EYPDVVELNVGGAIYTTRLGTLTKFPDSMLARMFSG---EL----PLLRDSKGRYFI-DRDGFLFRYVLDYLRTKAL-LL 76 (221)
T ss_pred ccCCceeeccCCeEEEeeccceeechHHHHHhhcCC---CC----CccccccccEEE-cCCcchHHHHHHHhccccc-cc
Confidence 56676655434445444432 32 233455666663 11 111223334445 4466799999999999555 56
Q ss_pred CCcccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChhhHHHHHHHH
Q 008477 419 DPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADV 470 (564)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~ 470 (564)
+.+ ...+-.|...|++|+++.+...+..-
T Consensus 77 pe~-----------------------f~e~~~L~rEA~f~~l~~~~~~l~~~ 105 (221)
T KOG2723|consen 77 PED-----------------------FAEVERLVREAEFFQLEAPVTYLLNS 105 (221)
T ss_pred chh-----------------------hhhHHHHHHHHHHHccccHHHHHhcc
Confidence 664 23788999999999999887765443
No 172
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=48.74 E-value=70 Score=30.39 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=24.6
Q ss_pred HHHHhcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 008477 38 FEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES 88 (564)
Q Consensus 38 ~~Aa~~g~~~~v~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ 88 (564)
--|+...+++.+.-++...- +-.+++.+|...+..+++-+|+.+
T Consensus 158 edAV~AsN~~~i~~~VtdKk-------dA~~Am~~si~~~K~dva~~lls~ 201 (284)
T PF06128_consen 158 EDAVKASNYEEISNLVTDKK-------DAHQAMWLSIGNAKEDVALYLLSK 201 (284)
T ss_pred HHHHhhcCHHHHHHHhcchH-------HHHHHHHHHhcccHHHHHHHHHhh
Confidence 34555666666655554221 224566666666666666666643
No 173
>KOG3840 consensus Uncharaterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=48.37 E-value=42 Score=33.05 Aligned_cols=88 Identities=18% Similarity=0.282 Sum_probs=56.6
Q ss_pred ccEEEEeCCeEEecchhhhhcccH-HHHHHhcCCccccccCCCCCCCCCCcEEcC-CCCHHHHHHHhHhhccCCCCCCCC
Q 008477 343 ADVCVRVDKKIFRCHQVVLASRSE-YFKARLSRMKDFYEGKEGLPGDILPCIEEH-DLSKETFEKMIEYMYTDGLKDIDP 420 (564)
Q Consensus 343 ~Dv~~~~~~~~~~~Hk~iL~arS~-~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~-~v~~~~~~~~l~~iYt~~~~~l~~ 420 (564)
--++..+++..|-+-+.+|.+.-. -.-.||.+.-.|... ++..+.++- +++...|+++|+|--+|.+ .-+.
T Consensus 96 ~~~t~lvd~~rf~v~q~llt~~p~Tmlg~mf~~g~~f~~p------NErgEyeVAdGi~s~vFRAILdYYksG~i-RCP~ 168 (438)
T KOG3840|consen 96 DKVCLLVDQTRFLVSQRLLTSKPDTMLGRMFSMGADLVSP------NERDEFEVADGMTSSCFRAILDYYQSGTM-RCPS 168 (438)
T ss_pred cceEEEeeeEEEEeeeeeecCCcchhhhhhhcccccccCC------CcCCceehhcchhHHHHHHHHHHHhcCce-eCCC
Confidence 346677888888888888865432 234566552223221 223445544 7999999999999999988 3433
Q ss_pred cccccCccchhhhcCCCCCCCCCchHHHHHHHHHhcccChh
Q 008477 421 DQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLF 461 (564)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~l~ 461 (564)
.. .+-+|-+++|++.++
T Consensus 169 ~v------------------------SvpELrEACDYLlip 185 (438)
T KOG3840|consen 169 SV------------------------SVSELREACDYLLVP 185 (438)
T ss_pred CC------------------------chHHHHhhcceEEee
Confidence 31 566777777776554
No 174
>COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones]
Probab=39.91 E-value=2e+02 Score=24.63 Aligned_cols=115 Identities=9% Similarity=0.055 Sum_probs=65.2
Q ss_pred CeEEEe-cCeeechhhHhhcccChhHHHhccccccccccceEEcCCCCHHHHHHHhhhHccCCccCCcc-cHHHHHHHH-
Q 008477 172 DVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD-DMEDLVKIC- 248 (564)
Q Consensus 172 Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~l~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~-~~~~ll~~a- 248 (564)
-|.+.. +|..|.+-+. +|-||-..+.|+... . .....+..+.|...+|..+++|+-...-..+++ +-.++-..+
T Consensus 3 ~i~l~s~dge~F~vd~~-iAerSiLikN~l~d~-~-~~n~p~p~pnVrSsvl~kv~ew~ehh~~s~sede~d~~~rks~p 79 (158)
T COG5201 3 MIELESIDGEIFRVDEN-IAERSILIKNMLCDS-T-ACNYPIPAPNVRSSVLMKVQEWMEHHTSSLSEDENDLEIRKSKP 79 (158)
T ss_pred ceEEEecCCcEEEehHH-HHHHHHHHHHHhccc-c-ccCCCCcccchhHHHHHHHHHHHHhccccCCCccChHhhhccCC
Confidence 344543 6677776554 467777788877421 1 112346677899999999999997654433332 122222111
Q ss_pred -hHhcHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHhhc
Q 008477 249 -KVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQG 289 (564)
Q Consensus 249 -~~c~~~~L~~~l~~~l~~~~~a~~~~~~~L~~~~~~~i~~~ 289 (564)
+...-.|+.-.-+-.+.+..-|.....+.|.+.+.+.+..-
T Consensus 80 ~D~wdr~Fm~vDqemL~eI~laaNYL~ikpLLd~gCKivaem 121 (158)
T COG5201 80 SDFWDRFFMEVDQEMLLEICLAANYLEIKPLLDLGCKIVAEM 121 (158)
T ss_pred ccHHHHHHHHhhHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 11111222221122355566677778888888887776543
No 175
>KOG2715 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=39.39 E-value=66 Score=28.88 Aligned_cols=80 Identities=10% Similarity=0.064 Sum_probs=49.7
Q ss_pred CCeEEEecCeeechhhHhhcccC-hhHHHhccccccc----cccceEEcCCCCHHHHHHHhhhHccCCccCCcccHHHHH
Q 008477 171 PDVVFYVQGRPIEAHRVILSARS-VFFRRKFETDWRY----RNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLV 245 (564)
Q Consensus 171 ~Dv~~~v~~~~~~~Hk~iL~a~S-~~f~~l~~~~~~e----~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll 245 (564)
.-|.+.|||..|.--|.-|..-+ .|+..+......- ......-+ +-+|..|..+|.|+-.|.+.++.-.-..++
T Consensus 21 ~wVRlNVGGt~f~TtktTl~rdp~sFl~rl~q~~~~l~sdrDetGAYlI-DRDP~~FgpvLNylRhgklvl~~l~eeGvL 99 (210)
T KOG2715|consen 21 LWVRLNVGGTVFLTTKTTLPRDPKSFLYRLCQREKDLPSDRDETGAYLI-DRDPFYFGPVLNYLRHGKLVLNKLSEEGVL 99 (210)
T ss_pred EEEEEecCCEEEEeeeeccccCcHHHHHHHHhcccCCCCCccccCceEe-ccCcchHHHHHHHHhcchhhhhhhhhhccc
Confidence 36778899999888888887666 4455554432111 11222222 568899999999999999876553333333
Q ss_pred HHHhHh
Q 008477 246 KICKVC 251 (564)
Q Consensus 246 ~~a~~c 251 (564)
.-|+++
T Consensus 100 ~EAefy 105 (210)
T KOG2715|consen 100 EEAEFY 105 (210)
T ss_pred hhhhcc
Confidence 333333
No 176
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=32.57 E-value=60 Score=24.92 Aligned_cols=45 Identities=22% Similarity=0.296 Sum_probs=33.0
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCCccCCCCchHHHHc--hHHHHHHHHhc
Q 008477 68 VALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAAL--NLKVRKLLKAY 118 (564)
Q Consensus 68 TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tl~~aa~--~~~i~~lLl~~ 118 (564)
.-+..|..+|+.++++.+++.+ .++ ...+..|.. +.++++.|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~-----~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD-----NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH-----HHHHHHHHHHhhHHHHHHHHHh
Confidence 4578999999999999999765 221 223555655 78889888775
No 177
>smart00875 BACK BTB And C-terminal Kelch. The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues.
Probab=23.34 E-value=84 Score=24.88 Aligned_cols=27 Identities=19% Similarity=0.064 Sum_probs=23.4
Q ss_pred HHHHHHhcccChhhHHHHHHHHHHhhc
Q 008477 449 EEMFDAASRYLLFPLKRAVADVLLLHL 475 (564)
Q Consensus 449 ~~ll~~A~~~~l~~L~~~c~~~l~~~l 475 (564)
.+++.+|+.|+.+.|...|..++.++.
T Consensus 2 ~~i~~~a~~~~~~~L~~~~~~~i~~nf 28 (101)
T smart00875 2 LGIRRFAELYGLEELLEKALRFILKNF 28 (101)
T ss_pred HhHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 457788999999999999999998765
Done!