BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008484
(564 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 259/542 (47%), Gaps = 48/542 (8%)
Query: 30 AAIKKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIH 88
+ I+ Y+++V+ + C+ ++ +NG+FPGPTI GD V+V +TN + IH
Sbjct: 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60
Query: 89 WHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR-ATVYGAI 147
WHG+ Q WADG A I+QC I G ++ Y+F V GT ++H H+ R A +YG++
Sbjct: 61 WHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNP-GTFFYHGHLGMQRSAGLYGSL 119
Query: 148 VIMXXXXXXXXXXXXNREEVILLGEWWHTDVEEVE-----KQGQKMGLPPNMS------- 195
++ + E +LL +WWH + + E K + +G P +
Sbjct: 120 IV-DPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQF 178
Query: 196 DAHTINGKPGPLFPCSEKHT-----FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTV 250
D L PC K + + V KTY +RI + L FAI H V
Sbjct: 179 DCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV 238
Query: 251 VEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGR-YFMAARPFNDAPIPVDNKTATGI 309
VE D Y +PF T I I G++ +VL+ +Q P Y+++ P T G+
Sbjct: 239 VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP-----NTPPGL 293
Query: 310 LQYKGIPNSL--LPTLA--QLPASNDSEFALNYNKKLRS-LNSPKFPADVPQKVDRKLFY 364
+PNS+ LPT Q PA +D + + N+ ++ + + SPK P K +R++F
Sbjct: 294 TLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPV----KFNRRIFL 349
Query: 365 TIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKAXXXXXXXXXXNY 424
+ +NG A +N++S +P T L A +NL F
Sbjct: 350 L------NTQNVINGYVKWA-INDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYD 402
Query: 425 TGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLT---VESHPFHLHGYNFFVVGTGI 481
P T T + + ++++LQ+ N++ E+HP+HLHG++F+V+G G
Sbjct: 403 IDTPPTNE-KTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 461
Query: 482 GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTA 541
G F + ++ NL +P RNT + GWTAIRF ADNPGVW HCH+E H G+
Sbjct: 462 GKFS-AEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVV 520
Query: 542 FA 543
FA
Sbjct: 521 FA 522
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 516 FRADNPGVWFMHCHLELHTGWGLKTAFAVE 545
F DNPG +F H HL + GL + V+
Sbjct: 93 FTVDNPGTFFYHGHLGMQRSAGLYGSLIVD 122
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 238/527 (45%), Gaps = 80/527 (15%)
Query: 38 DVQVKN--VSRLCHAKPIVTVNGRFPGPTIYVREGDR----VLVNVTNHAQY-NMSIHWH 90
D+ + N VS ++ + VN FP P I +GDR V+ N+TNH + SIHWH
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 91 GLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----G 145
G Q+ WADGPA++ QCPI TG+++ YDF V Q GT W+H+H+ +T Y G
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHL----STQYCDGLRG 122
Query: 146 AIVIMXXXXXXXXXXXXNREE-VILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKP 204
IV+ + + VI L +W+H K+G P +DA ING
Sbjct: 123 PIVVYDPQDPHKSLYDVDDDSTVITLADWYHL--------AAKVGSPVPTADATLINGL- 173
Query: 205 GPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTE 264
G + V GK Y R+++ + + F+I GH+ TV+E D+V KP T +
Sbjct: 174 GRSIDTLNADLAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVD 233
Query: 265 AILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLA 324
+I I Q + ++ A+Q G Y++ A P N D + IL+Y G + PT +
Sbjct: 234 SIQIFAAQRYSFVLNADQDVGNYWIRALP-NSGTRNFDGGVNSAILRYDGAA-PVEPTTS 291
Query: 325 QLPASND-SEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLL 383
Q P++N E AL L +P PA P VD L GF G +
Sbjct: 292 QTPSTNPLVESAL---TTLEGTAAPGSPA--PGGVDLALNMAFGFA---------GGKF- 336
Query: 384 ATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLS 442
T+N SF P LLQ +GA L S + +
Sbjct: 337 -TINGASFTPPTVPVLLQI----------------------LSGAQSAQDLLPSGS--VY 371
Query: 443 KIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERN 502
+ N+ IE+ L T HPFHLHG+ F VV + + YN +P+ R+
Sbjct: 372 SLPANADIEISLPATAAAPGFPHPFHLHGHTFAVVRSAGS--------STYNYENPVYRD 423
Query: 503 TAAVPT-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 548
+ + G IRFR DNPG WF+HCH++ H G A ED P
Sbjct: 424 VVSTGSPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMA-EDIP 469
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 160/508 (31%), Positives = 225/508 (44%), Gaps = 78/508 (15%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNV----TNHAQY-NMSIHWHGLKQYRNGWADGPAYITQ 108
+ VNG FP P I ++GDR +NV TNH + SIHWHG Q WADGPA++ Q
Sbjct: 25 IVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQ 84
Query: 109 CPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----GAIVIMXXXXXXXXXXXXN 163
CPI +G+S+ YDF+V Q GT W+H+H+ +T Y G V+ +
Sbjct: 85 CPIASGHSFLYDFHVPDQAGTFWYHSHL----STQYCDGLRGPFVVYDPKDPHASRYDVD 140
Query: 164 REE-VILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVES 222
E VI L +W+HT + G + P +DA ING G + V+
Sbjct: 141 NESTVITLTDWYHT----AARLGPRF---PLGADATLINGL-GRSASTPTAALAVINVQH 192
Query: 223 GKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ 282
GK Y R+++ + + F+I GHN TV+EVD + ++P ++I I Q + ++ ANQ
Sbjct: 193 GKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQ 252
Query: 283 KPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKL 342
G Y++ A P N + + IL+Y+G P +A+ + + L
Sbjct: 253 TVGNYWIRANP-NFGTVGFAGGINSAILRYQGAP------VAEPTTTQTTSVIPLIETNL 305
Query: 343 RSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT-ALLQ 400
L P P VD+ L F NGT +NN SF P LLQ
Sbjct: 306 HPLARMPVPGSPTPGGVDKALNLAFNF---------NGTNFF--INNASFTPPTVPVLLQ 354
Query: 401 AHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLL 460
+GA L A + + +STIE+ L T L
Sbjct: 355 I----------------------LSGAQTAQDL--LPAGSVYPLPAHSTIEITLPATALA 390
Query: 461 TVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGWTAIRFR 517
HPFHLHG+ F VV + YN DPI R+ + T G IRF+
Sbjct: 391 PGAPHPFHLHGHAFAVVRSAGST--------TYNYNDPIFRDVVSTGTPAAGDNVTIRFQ 442
Query: 518 ADNPGVWFMHCHLELHTGWGLKTAFAVE 545
DNPG WF+HCH++ H G FA +
Sbjct: 443 TDNPGPWFLHCHIDFHLEAGFAIVFAED 470
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 234/527 (44%), Gaps = 80/527 (15%)
Query: 38 DVQVKN--VSRLCHAKPIVTVNGRFPGPTIYVREGDR----VLVNVTNHAQY-NMSIHWH 90
D+ + N VS ++ + VN FP P I +GDR V+ N+TNH + SIHWH
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 91 GLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----G 145
G Q+ WADGPA++ QCPI TG+++ YDF V Q GT W+H+H+ +T Y G
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHL----STQYCDGLRG 122
Query: 146 AIVIMXXXXXXXXXXXXNREE-VILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKP 204
IV+ + + VI L +W+H K+G P +DA ING
Sbjct: 123 PIVVYDPNDPHASLYDVDDDSTVITLADWYHL--------AAKVGAPVPTADATLINGL- 173
Query: 205 GPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTE 264
G + V GK Y R+++ + + F+I GH+ TV+E D+V KP T +
Sbjct: 174 GRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVD 233
Query: 265 AILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLA 324
++ I Q + ++ A+Q Y++ A P N T + IL+Y G + PT +
Sbjct: 234 SLQIFAAQRYSFVLNADQDVDNYWIRALP-NSGTQNFAGGTNSAILRYDGAA-PVEPTTS 291
Query: 325 QLPASND-SEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLL 383
Q P++N E AL K + SP P VD L GF +
Sbjct: 292 QTPSTNPLVESALTTLKGTAAPGSP-----TPGGVDLALNMAFGFAGGNF---------- 336
Query: 384 ATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLS 442
T+N SF P LLQ +GA A L A +
Sbjct: 337 -TINGASFTPPTVPVLLQI----------------------LSGAQSAADL--LPAGSVY 371
Query: 443 KIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERN 502
+ N+ IE+ L T HPFHLHG+ F VV + + YN +P+ R+
Sbjct: 372 SLPANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSAGS--------STYNYANPVYRD 423
Query: 503 TAAVPT-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 548
+ G IRFR DNPG WF+HCH++ H G A ED P
Sbjct: 424 VVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMA-EDIP 469
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 234/527 (44%), Gaps = 80/527 (15%)
Query: 38 DVQVKN--VSRLCHAKPIVTVNGRFPGPTIYVREGDR----VLVNVTNHAQY-NMSIHWH 90
D+ + N VS ++ + VN FP P I +GDR V+ N+TNH + SIHWH
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 91 GLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----G 145
G Q+ WADGPA++ QCPI TG+++ YDF V Q GT W+H+H+ +T Y G
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHL----STQYCDGLRG 122
Query: 146 AIVIMXXXXXXXXXXXXNREE-VILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKP 204
IV+ + + VI L +W+H K+G P +DA ING
Sbjct: 123 PIVVYDPNDPHASLYDVDDDSTVITLADWYHL--------AAKVGAPVPTADATLINGL- 173
Query: 205 GPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTE 264
G + V GK Y R+++ + + F+I GH+ TV+E D+V KP T +
Sbjct: 174 GRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVD 233
Query: 265 AILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLA 324
++ I Q + ++ A+Q Y++ A P N T + IL+Y G + PT +
Sbjct: 234 SLQIFAAQRYSFVLNADQDVDNYWIRALP-NSGTQNFAGGTNSAILRYDGAA-PVEPTTS 291
Query: 325 QLPASND-SEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLL 383
Q P++N E AL K + SP P VD L GF +
Sbjct: 292 QTPSTNPLVESALTTLKGTAAPGSP-----TPGGVDLALNMAFGFAGGNF---------- 336
Query: 384 ATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLS 442
T+N SF P LLQ +GA A L A +
Sbjct: 337 -TINGASFTPPTVPVLLQI----------------------LSGAQSAADL--LPAGSVY 371
Query: 443 KIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERN 502
+ N+ IE+ L T HPFHLHG+ F VV + + YN +P+ R+
Sbjct: 372 SLPANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSAGS--------STYNYANPVYRD 423
Query: 503 TAAVPT-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 548
+ G IRFR DNPG WF+HCH++ H G A ED P
Sbjct: 424 VVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMA-EDIP 469
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 169/530 (31%), Positives = 236/530 (44%), Gaps = 87/530 (16%)
Query: 51 KPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ-----YNMSIHWHGLKQYRNGWADGPAY 105
+ V NG FPGP I +GD +NV ++ +IHWHGL Q+ WADGPA+
Sbjct: 22 RAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGLFQHGTNWADGPAF 81
Query: 106 ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----GAIVIMXXXXXXXXXX 160
+ QCPI +GNS+ YDF V Q GT W+H+H+ +T Y G +V+
Sbjct: 82 VNQCPIASGNSFLYDFTVPDQAGTFWYHSHL----STQYCDGLRGPLVVYDPSDPYASMY 137
Query: 161 XXNRE-EVILLGEWWHTDVEEVEKQGQKMG--LPPNMSDAHTINGKPGPLFPCSEKHTFA 217
+ + VI L +W+HT K+G PPN +D+ ING G +
Sbjct: 138 DVDDDTTVITLSDWYHT--------AAKLGPAFPPN-ADSVLINGL-GRFAGGNASDLAV 187
Query: 218 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 277
+ VE K Y R+++ + + F+I GHN T++EVD V +P ++I I Q + +
Sbjct: 188 ITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQRYSFV 247
Query: 278 VQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALN 337
+ A Q Y++ A P N I + IL+Y G + + PT A+ +
Sbjct: 248 LNATQSVDNYWIRAIP-NTGTIDTTGGLNSAILRYSGA-DIVDPT-----ANATTSVIPL 300
Query: 338 YNKKLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT 396
L L+SP P D V VD + F NGT +NN + + P
Sbjct: 301 VETDLVPLDSPAAPGDPVVGGVDLAMNLDFSF---------NGTNFF--INNETLIPPTV 349
Query: 397 -ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQ 455
LLQ L G A TG+ T L NSTIEL
Sbjct: 350 PVLLQI----LSGAQSASDLLP-------TGSVYTLPL-------------NSTIELSFP 385
Query: 456 DTNLLTVES-----HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT-G 509
T + V + HPFHLHG+ F VV + ++YN V+P+ R+T + G
Sbjct: 386 ITTVNGVTNAPGAPHPFHLHGHAFSVVRSAGS--------SDYNYVNPVRRDTVSTGNPG 437
Query: 510 GWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPT 559
IRF DN G WF+HCH++ H G FA ED P SV P PT
Sbjct: 438 DNVTIRFTTDNAGPWFLHCHIDFHLEAGFAIVFA-EDTPD-TASVNPVPT 485
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 229/516 (44%), Gaps = 81/516 (15%)
Query: 50 AKPIVTVNGRFPGPTIYVREGDR----VLVNVTNHAQY-NMSIHWHGLKQYRNGWADGPA 104
++ V VNG PGP + GDR V+ N+TNH + SIHWHG Q+ WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 105 YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----GAIVIMX-XXXXXXX 158
+I QCPI G+S+ YDF V Q GT W+H+H+ +T Y G V+
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHL----STQYCDGLRGPFVVYDPNDPHASR 136
Query: 159 XXXXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAM 218
N + VI L +W+HT K G + P +DA INGK G S +
Sbjct: 137 YDVDNDDTVITLADWYHT----AAKLGPRF---PGGADATLINGK-GRAPSDSVAELSVI 188
Query: 219 EVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLV 278
+V GK Y R+++ + N F+I GHN T++EVD+V ++P ++I I Q + ++
Sbjct: 189 KVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVL 248
Query: 279 QANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNY 338
ANQ Y++ A P N + D + IL+Y G P A P +N +
Sbjct: 249 DANQAVDNYWIRANP-NFGNVGFDGGINSAILRYDGAP-------AVEPTTNQTTSVKPL 300
Query: 339 NK-KLRSLNSPKFP-ADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT 396
N+ L L S P A VD+ + F NG+ +N SFV P
Sbjct: 301 NEVDLHPLVSTPVPGAPSSGGVDKAINMAFNF---------NGSNFF--INGASFVPPTV 349
Query: 397 -ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQ 455
LLQ +GA L S + + + N++IE+
Sbjct: 350 PVLLQI----------------------LSGAQTAQDLLPSGSVYV--LPSNASIEISFP 385
Query: 456 DTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGWT 512
T HPFHLHG+ F VV + YN +PI R+ + T G
Sbjct: 386 ATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYDNPIFRDVVSTGTPAAGDNV 437
Query: 513 AIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 548
IRF +NPG WF+HCH++ H G A ED P
Sbjct: 438 TIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA-EDTP 472
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 165/522 (31%), Positives = 230/522 (44%), Gaps = 81/522 (15%)
Query: 44 VSRLCHAKPIVTVNGRFPGPTIYVREGDR----VLVNVTNHAQY-NMSIHWHGLKQYRNG 98
VS ++ V VNG PGP + GDR V+ N+TNH + SIHWHG Q+
Sbjct: 15 VSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTN 74
Query: 99 WADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----GAIVIMX-X 152
WADGPA+I QCPI G+S+ YDF V Q GT W+H+H+ +T Y G V+
Sbjct: 75 WADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHL----STQYCDGLRGPFVVYDPN 130
Query: 153 XXXXXXXXXXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSE 212
N + VI L +W+HT K G + P +DA INGK G S
Sbjct: 131 DPHASRYDVDNDDTVITLADWYHT----AAKLGPRF---PGGADATLINGK-GRAPSDSV 182
Query: 213 KHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQ 272
++V GK Y R+++ + N F+I GHN T++EVD+V ++P ++I I Q
Sbjct: 183 AELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQ 242
Query: 273 TTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDS 332
+ ++ ANQ Y++ A P N + D + IL+Y G P A P +N +
Sbjct: 243 RYSFVLDANQAVDNYWIRANP-NFGNVGFDGGINSAILRYDGAP-------AVEPTTNQT 294
Query: 333 EFALNYNK-KLRSLNSPKFPADVPQ-KVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNIS 390
N+ L L S P VD+ + F NG+ +N S
Sbjct: 295 TSVKPLNEVDLHPLVSTPVPGSPSSGGVDKAINMAFNF---------NGSNFF--INGAS 343
Query: 391 FVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNST 449
FV P LLQ +GA L S + + + N++
Sbjct: 344 FVPPTVPVLLQI----------------------LSGAQTAQDLLPSGSVYV--LPSNAS 379
Query: 450 IELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT- 508
IE+ T HPFHLHG+ F VV + YN +PI R+ + T
Sbjct: 380 IEISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYDNPIFRDVVSTGTP 431
Query: 509 --GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 548
G IRF +NPG WF+HCH++ H G A ED P
Sbjct: 432 AAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA-EDTP 472
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 223/513 (43%), Gaps = 78/513 (15%)
Query: 49 HAKPIVTVNGRFPGPTIYVREGDRVLVNVTNH-AQYNM----SIHWHGLKQYRNGWADGP 103
H++ V VNG PGP I +GD+ +NV N+ + M S+HWHG Q WADGP
Sbjct: 20 HSRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGP 79
Query: 104 AYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----GAIVIMX-XXXXXX 157
A++ QCPI G+S+ YDF+ Q GT W+H+H+ +T Y G V+
Sbjct: 80 AFVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHL----STQYCDGDRGPFVVYDPNDPSAN 135
Query: 158 XXXXXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKP-GPLFPCSEKHTF 216
N VI L +W+HT + + P +DA ING+ GP P ++
Sbjct: 136 LYDVDNLNTVITLTDWYHTAAQNGPAK-------PGGADATLINGQGRGPSSPSADLAV- 187
Query: 217 AMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNV 276
+ V +GK Y R+++ + + F+I GH T+++VD++ +P I I Q +
Sbjct: 188 -ISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSF 246
Query: 277 LVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFAL 336
++ ANQ Y++ A P N + N + IL+Y G + PT +Q + +
Sbjct: 247 ILNANQAVNNYWIRANP-NQGNVGFTNGINSAILRYSGAA-ATQPTTSQTSSVQPLD--- 301
Query: 337 NYNKKLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQ 395
L L + P V V+ + F NGT ++ SFV P
Sbjct: 302 --QTNLHPLTATAVPGSPVAGGVNLAINQAFNF---------NGTNHF--VDGASFVPPT 348
Query: 396 TALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQ 455
+L +GA A L S + + ++ IE+
Sbjct: 349 VPVLSQI---------------------VSGAQSAADLLASG--LVYSLPSDANIEISFP 385
Query: 456 DTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGW---T 512
T+ HPFHLHG+ F VV + YN DPI R+T + T
Sbjct: 386 ATSAAAGGPHPFHLHGHAFAVVRSAGS--------TTYNYNDPIFRDTVSTGTPAANDNV 437
Query: 513 AIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 545
IRF+ +NPG WF+HCH++ H G FA +
Sbjct: 438 TIRFKTNNPGPWFLHCHIDFHLEAGFAVVFAQD 470
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 215/512 (41%), Gaps = 76/512 (14%)
Query: 51 KPIVTVNGRFPGPTIYVREGDRVLVNV----TNHAQYNM-SIHWHGLKQYRNGWADGPAY 105
+ + VN FP P I GD +N+ TNH SIHWHG Q WADGPA+
Sbjct: 22 RAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAF 81
Query: 106 ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----GAIVIMXXXXXXXXXX 160
I QCPI +GNS+ YDF V GQ GT W+H+H+ +T Y G V+
Sbjct: 82 INQCPIASGNSFLYDFQVPGQAGTFWYHSHL----STQYCDGLRGPFVVYDPNDPHANLY 137
Query: 161 XXNREE-VILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAME 219
+ E VI L +W+H K G + P +D+ ING G +
Sbjct: 138 DVDDESTVITLADWYHV----AAKLGPRF---PKGADSTLINGL-GRSTSTPTADLAVIS 189
Query: 220 VESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQ 279
V GK Y R+++ + + F+I H TV+E D V T+P T ++I I Q + ++
Sbjct: 190 VTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLN 249
Query: 280 ANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYN 339
ANQ Y++ A P N + + IL+Y P +N + L
Sbjct: 250 ANQDVDNYWIRANP-NFGTTGFADGVNSAILRYDDAD-------PVEPVTNQTGTTLLLE 301
Query: 340 KKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALL 399
L L S P + P + L + F D +NG SF P +L
Sbjct: 302 TDLHPLTSMPVPGN-PTQGGADLNLNMAFNFDGTNFFINGE---------SFTPPTVPVL 351
Query: 400 QAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNL 459
L+ + +GA L S + + + NS+IE+ T
Sbjct: 352 ------LQII---------------SGANTAQDLLPSGS--VYSLPSNSSIEITFPATTA 388
Query: 460 LTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGWTAIRF 516
HPFHLHG+ F VV + +YN DP+ R+ + T G IRF
Sbjct: 389 APGAPHPFHLHGHVFAVVRSAGS--------TSYNYDDPVWRDVVSTGTPQAGDNVTIRF 440
Query: 517 RADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 548
+ DNPG WF+HCH++ H G A ED P
Sbjct: 441 QTDNPGPWFLHCHIDFHLDAGFAVVMA-EDIP 471
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 159/519 (30%), Positives = 228/519 (43%), Gaps = 87/519 (16%)
Query: 50 AKPIVTVNGRFPGPTIYVREGDR----VLVNVTNHAQYNM-SIHWHGLKQYRNGWADGPA 104
++ V VNG PGP + GDR V+ N+TNH S+HWHG Q WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 105 YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----GAIVIMX-XXXXXXX 158
+I QCPI G+S+ YDF V Q GT W+H+H+ +T Y G V+
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHL----STQYCDGLRGPFVVYDPNDPHASR 136
Query: 159 XXXXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAM 218
N + VI L +W+HT K G + P +DA INGK G + +
Sbjct: 137 YDVDNDDTVITLADWYHT----AAKLGPRF---PAGADATLINGK-GRAPSDTSAELSVI 188
Query: 219 EVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLV 278
+V GK R+++ + + F+I GHN T++EVD+ ++P + ++I I Q + ++
Sbjct: 189 KVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVL 248
Query: 279 QANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNY 338
ANQ Y++ A P N + + + IL+Y G P A P +N +
Sbjct: 249 NANQAVDNYWIRANP-NFGNVGFNGGINSAILRYDGAP-------AVEPTTNQTTSVKPL 300
Query: 339 NK-KLRSLNSPKFPADVPQ-KVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT 396
N+ L L S P VD+ + F NG+ +N SFV P
Sbjct: 301 NEVNLHPLVSTPVPGSPSSGGVDKAINMAFNF---------NGSNFF--INGASFVPPSV 349
Query: 397 -ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQ 455
LLQ +GA L S + + + N++IE+
Sbjct: 350 PVLLQI----------------------LSGAQTAQDLLPSGSVXV--LPSNASIEISFP 385
Query: 456 DTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGWT 512
T HPFHLHG+ F VV + YN +PI R+ + T G
Sbjct: 386 ATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYSNPIFRDVVSTGTPAAGDNV 437
Query: 513 AIRFRADNPGVWFMHCHLELHTGWGLKTAFAV---EDGP 548
IRF +NPG WF+HCH++ H L+ FAV ED P
Sbjct: 438 TIRFLTNNPGPWFLHCHIDFH----LEGGFAVVQAEDVP 472
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 160/519 (30%), Positives = 224/519 (43%), Gaps = 87/519 (16%)
Query: 50 AKPIVTVNGRFPGPTIYVREGDR----VLVNVTNHAQYNM-SIHWHGLKQYRNGWADGPA 104
++ V VNG PGP + GDR V+ N+TNH S+HWHG Q WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 105 YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----GAIVIMX-XXXXXXX 158
+I QCPI G+S+ YDF V Q GT W+H+H+ +T Y G V+
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHL----STQYCDGLRGPFVVYDPNDPHASR 136
Query: 159 XXXXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAM 218
N + I L +W+HT K G PN +D+ INGK G S +
Sbjct: 137 YDVDNDDTTITLADWYHT----AAKLGPAF---PNGADSTLINGK-GRAPSDSSAQLSVV 188
Query: 219 EVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLV 278
V GK R+++ + + F+I GHN T++E D+V ++P T++I I Q + +
Sbjct: 189 SVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTL 248
Query: 279 QANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNY 338
ANQ Y++ A P N + + + IL+Y G P A P +N S
Sbjct: 249 NANQAVDNYWIRANP-NFGNVGFNGGINSAILRYDGAP-------AVEPTTNQSTSTQPL 300
Query: 339 NK-KLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT 396
N+ L L S P VD+ + F NG+ +N SF P
Sbjct: 301 NETNLHPLVSTPVPGSPAAGGVDKAINMAFNF---------NGSNFF--INGASFTPPSV 349
Query: 397 -ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQ 455
LLQ +GA L S + + + N++IE+
Sbjct: 350 PVLLQI----------------------LSGAQTAQDLLPSGS--VXTLPSNASIEISFP 385
Query: 456 DTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGWT 512
T HPFHLHG+ F VV + YN +PI R+ + T G
Sbjct: 386 ATAAAPGAPHPFHLHGHVFAVVRSAGSTV--------YNYSNPIFRDVVSTGTPAAGDNV 437
Query: 513 AIRFRADNPGVWFMHCHLELHTGWGLKTAFAV---EDGP 548
IRF +NPG WF+HCH++ H L+ FAV ED P
Sbjct: 438 TIRFLTNNPGPWFLHCHIDFH----LEGGFAVVQAEDVP 472
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 223/519 (42%), Gaps = 77/519 (14%)
Query: 44 VSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNV----TNHAQYNMS-IHWHGLKQYRNG 98
VS A+ V VNG P P I +GDR +NV TNH S IHWHG Q
Sbjct: 15 VSPDGFAREAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTN 74
Query: 99 WADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----GAIVIMX-X 152
WADGPA++ QCPI +G+S+ YDF V Q GT W+H+H+ +T Y G V+
Sbjct: 75 WADGPAFVNQCPIASGHSFLYDFQVPDQAGTFWYHSHL----STQYCDGLRGPFVVYDPN 130
Query: 153 XXXXXXXXXXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSE 212
N + VI L +W+H K G + P SD+ ING G +
Sbjct: 131 DPHASLYDIDNDDTVITLADWYHV----AAKLGPRF---PFGSDSTLINGL-GRTTGIAP 182
Query: 213 KHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQ 272
++V GK Y R+++ + + F+I H T++E D++ T+P ++I I Q
Sbjct: 183 SDLAVIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQ 242
Query: 273 TTNVLVQANQKPGRYFMAARP-FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASND 331
+ ++ A+Q Y++ A P F + + IL+Y G P ++ P
Sbjct: 243 RYSFVLDASQPVDNYWIRANPAFGNTGFA--GGINSAILRYDGAPEIEPTSVQTTPTKPL 300
Query: 332 SEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISF 391
+E L+ + SP+ P VD+ L F NGT +N+ +F
Sbjct: 301 NEVDLHPLSPMPVPGSPE-----PGGVDKPLNLVFNF---------NGTNFF--INDHTF 344
Query: 392 VMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTI 450
V P LLQ +GA L + + + NS+I
Sbjct: 345 VPPSVPVLLQI----------------------LSGAQAAQDLVPEGSVFV--LPSNSSI 380
Query: 451 ELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAV-PTG 509
E+ T HPFHLHG+ F VV + + YN +PI R+ + G
Sbjct: 381 EISFPATANAPGFPHPFHLHGHAFAVVRSAGSSV--------YNYDNPIFRDVVSTGQPG 432
Query: 510 GWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 548
IRF +NPG WF+HCH++ H G A ED P
Sbjct: 433 DNVTIRFETNNPGPWFLHCHIDFHLDAGFAVVMA-EDTP 470
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 164/530 (30%), Positives = 227/530 (42%), Gaps = 83/530 (15%)
Query: 38 DVQVKN--VSRLCHAKPIVTVNGRFPGPTIYVREGDR----VLVNVTNHAQY-NMSIHWH 90
D+ + N VS ++ V VNG PGP I GDR V+ N+TNH + SIHWH
Sbjct: 7 DLTITNAAVSPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWH 66
Query: 91 GLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----G 145
G Q WADGPA+I QCPI +G+S+ YDF V Q GT W+H+H+ +T Y G
Sbjct: 67 GFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHL----STQYCDGLRG 122
Query: 146 AIVIMX-XXXXXXXXXXXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKP 204
V+ N + VI L +W+H K G P +DA INGK
Sbjct: 123 PFVVYDPNDPAADLYDVDNDDTVITLVDWYHV----AAKLGPAF---PLGADATLINGK- 174
Query: 205 GPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTE 264
G + + V GK Y R+++ + + F+I GHN T++E D++ T P +
Sbjct: 175 GRSPSTTTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVD 234
Query: 265 AILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLA 324
+I I Q + +++ANQ Y++ A P N + + IL+Y G A
Sbjct: 235 SIQIFAAQRYSFVLEANQAVDNYWIRANP-NFGNVGFTGGINSAILRYDG-------AAA 286
Query: 325 QLPASNDSEFALNYNK-KLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRL 382
P + + N+ L L + P V VD + F NGT
Sbjct: 287 VEPTTTQTTSTAPLNEVNLHPLVATAVPGSPVAGGVDLAINMAFNF---------NGTNF 337
Query: 383 LATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRL 441
+N SF P LLQ +GA L S + +
Sbjct: 338 F--INGASFTPPTVPVLLQI----------------------ISGAQNAQDLLPSGS--V 371
Query: 442 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIER 501
+ N+ IE+ T HPFHLHG+ F VV + YN +PI R
Sbjct: 372 YSLPSNADIEISFPATAAAPGAPHPFHLHGHAFAVVRSAGSTV--------YNYDNPIFR 423
Query: 502 NTAAVPT---GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 548
+ + T G IRFR DNPG WF+HCH++ H G FA ED P
Sbjct: 424 DVVSTGTPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVFA-EDIP 472
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 220/508 (43%), Gaps = 68/508 (13%)
Query: 51 KPIVTVNGRFPGPTIYVREGDRVLVNVTNH-----AQYNMSIHWHGLKQYRNGWADGPAY 105
+P V G FPGP I GD + N + SIHWHG Q WADGPA+
Sbjct: 23 RPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF 82
Query: 106 ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRAT-VYGAIVIMXXXXXXXXXXXXNR 164
ITQCPI GNS++Y+FNV G GT W+H+H+ + G V+ +
Sbjct: 83 ITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDD 142
Query: 165 EEVIL-LGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESG 223
+ I+ L +W+H +E+ G +D+ I+G + + VE G
Sbjct: 143 DTTIITLADWYHVLAKEMGAGGAI------TADSTLIDGLGRTHVNVAAVPLSVITVEVG 196
Query: 224 KTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQK 283
K Y +R+++ + + F+I GH+ T++E D V ++ T + I I Q + ++ ANQ
Sbjct: 197 KRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQP 256
Query: 284 PGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLR 343
G Y++ A P N D + IL+Y G + T+A + L
Sbjct: 257 VGNYWIRANP-NSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-----CLIETDLH 310
Query: 344 SLNSPKFPADVPQ-KVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT-ALLQA 401
L+ P + Q D L ++GF +C V +N +SF P LLQ
Sbjct: 311 PLSRNGVPGNPHQGGADCNLNLSLGF---ACGNFV--------INGVSFTPPTVPVLLQI 359
Query: 402 HYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLT 461
+GA A L S + + + NSTIE+ L
Sbjct: 360 ----------------------CSGANTAADLLPSGS--VISLPSNSTIEIALPAG--AA 393
Query: 462 VESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAV-PTGGWTAIRFRADN 520
HPFHLHG++F V + +NY+ DPI R+ ++ G IRF DN
Sbjct: 394 GGPHPFHLHGHDFAVSESA------SNSTSNYD--DPIWRDVVSIGGVGDNVTIRFCTDN 445
Query: 521 PGVWFMHCHLELHTGWGLKTAFAVEDGP 548
PG WF+HCH++ H G FA ED P
Sbjct: 446 PGPWFLHCHIDWHLDAGFAIVFA-EDIP 472
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 160/515 (31%), Positives = 220/515 (42%), Gaps = 80/515 (15%)
Query: 50 AKPIVTVNGRFPGPTIYVREGDRVLVNVTNH-AQYNM----SIHWHGLKQYRNGWADGPA 104
A+ VT G P I DR +NV + NM SIHWHG Q DGPA
Sbjct: 42 ARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA 101
Query: 105 YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVY-----GAIVIMX-XXXXXXX 158
++ QCPI S+ YDF V GQ GT W+H+H+ +T Y GA V+
Sbjct: 102 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHL----STQYCDGLRGAFVVYDPNDPHLSL 157
Query: 159 XXXXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAM 218
+ VI + +W+H+ + K D ING S +
Sbjct: 158 YDVDDASTVITIADWYHSLSTVLFPNPNKAPP---APDTTLINGLGRNSANPSAGQLAVV 214
Query: 219 EVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLV 278
V+SGK Y RI++ + F+I GH TV+EVD V +P T +++ I GQ +V+V
Sbjct: 215 SVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVV 274
Query: 279 QANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNY 338
+ANQ G Y++ A P N + I +Y+G +A+ S +S ALN
Sbjct: 275 EANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQG------AAVAEPTTSQNSGTALN- 326
Query: 339 NKKLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT- 396
L L +P P + VP D L IG N T T+N F+ P
Sbjct: 327 EANLIPLINPGAPGNPVPGGADINLNLRIGR---------NATTADFTINGAPFIPPTVP 377
Query: 397 ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQD 456
LLQ L GV GA ++ + N IE+ +
Sbjct: 378 VLLQI----LSGVTNPNDLLPG-------GAVIS-------------LPANQVIEISIPG 413
Query: 457 TNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPAN--YNLVDPIERNTAAVPTGGW-TA 513
+HPFHLHG+ NFD V+ P + YN V+P+ R+ ++ GG
Sbjct: 414 GG-----NHPFHLHGH----------NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVT 458
Query: 514 IRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 548
RF DNPG WF+HCH++ H GL FA ED P
Sbjct: 459 FRFVTDNPGPWFLHCHIDWHLEAGLAVVFA-EDIP 492
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 219/516 (42%), Gaps = 74/516 (14%)
Query: 43 NVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ-----YNMSIHWHGLKQYRN 97
NVS + + VNG GP I + D +NV N SIHWHGL Q
Sbjct: 15 NVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGT 73
Query: 98 GWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRAT-VYGAIVIMXXXXXX 156
WADG + QCPI G+++ Y F G GT W+H+H + G +VI
Sbjct: 74 NWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPH 133
Query: 157 XXXXXXNREEVIL-LGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHT 215
+ E I+ L +W+H ++ Q DA INGK G
Sbjct: 134 AALYDEDDENTIITLADWYHIPAPSIQGAAQP--------DATLINGK-GRYVGGPAAEL 184
Query: 216 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN 275
+ VE GK Y +R+I+ + + F+I GH T++EVD T+P T + + I GQ +
Sbjct: 185 SIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYS 244
Query: 276 VLVQANQKPGRYFMAARP---FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDS 332
++ ANQ Y++ A+P N N + IL+Y G N+ T ++N +
Sbjct: 245 FVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-----SANPN 299
Query: 333 EFALNYNKKLRSLNSPKFPA-DVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISF 391
LN L +L P P P D L + +GF +G R T+N ++
Sbjct: 300 PAQLN-EADLHALIDPAAPGIPTPGAADVNLRFQLGF---------SGGRF--TINGTAY 347
Query: 392 VMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTI 450
P LLQ +GA L A + ++ N +
Sbjct: 348 ESPSVPTLLQI----------------------MSGAQSANDL--LPAGSVYELPRNQVV 383
Query: 451 ELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVP-TG 509
ELV+ L HPFHLHG+ F VV + + YN V+P++R+ ++ TG
Sbjct: 384 ELVVPAGVLGG--PHPFHLHGHAFSVVRS--------AGSSTYNFVNPVKRDVVSLGVTG 433
Query: 510 GWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 545
IRF DNPG WF HCH+E H GL FA +
Sbjct: 434 DEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAED 469
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 219/516 (42%), Gaps = 74/516 (14%)
Query: 43 NVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ-----YNMSIHWHGLKQYRN 97
NVS + + VNG GP I + D +NV N SIHWHGL Q
Sbjct: 15 NVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGT 73
Query: 98 GWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRAT-VYGAIVIMXXXXXX 156
WADG + QCPI G+++ Y F G GT W+H+H + G +VI
Sbjct: 74 NWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPH 133
Query: 157 XXXXXXNREEVIL-LGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHT 215
+ E I+ L +W+H ++ Q DA INGK G
Sbjct: 134 AALYDEDDENTIITLADWYHIPAPSIQGAAQP--------DATLINGK-GRYVGGPAAEL 184
Query: 216 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN 275
+ VE GK Y +R+I+ + + F+I GH T++EVD T+P T + + I GQ +
Sbjct: 185 SIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYS 244
Query: 276 VLVQANQKPGRYFMAARP---FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDS 332
++ ANQ Y++ A+P N N + IL+Y G N+ T ++N +
Sbjct: 245 FVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-----SANPN 299
Query: 333 EFALNYNKKLRSLNSPKFPA-DVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISF 391
LN L +L P P P D L + +GF +G R T+N ++
Sbjct: 300 PAQLN-EADLHALIDPAAPGIPTPGAADVNLRFQLGF---------SGGRF--TINGTAY 347
Query: 392 VMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTI 450
P LLQ +GA L A + ++ N +
Sbjct: 348 ESPSVPTLLQI----------------------MSGAQSANDL--LPAGSVYELPRNQVV 383
Query: 451 ELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVP-TG 509
ELV+ L HPFHLHG+ F VV + + YN V+P++R+ ++ TG
Sbjct: 384 ELVVPAGVLGG--PHPFHLHGHAFSVVRS--------AGSSTYNFVNPVKRDVVSLGVTG 433
Query: 510 GWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 545
IRF DNPG WF HCH+E H GL FA +
Sbjct: 434 DEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAED 469
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 210/508 (41%), Gaps = 69/508 (13%)
Query: 42 KNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ-YNMSIHWHGLKQYRNGWA 100
+NV L ++P++T NG+FP P I V +GDRV + +TN N S+H+HGL Q
Sbjct: 14 RNVDGL-KSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASM 72
Query: 101 DGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVYGAIVIMXXXXXXXXXX 160
DG ++TQCPI G++ Y+F V GT W+H+H + I+
Sbjct: 73 DGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFII---KDDSFPY 129
Query: 161 XXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPL-FPCSEKHTFAME 219
+ E + L EW+H V ++ K MS + +P P + E
Sbjct: 130 DYDEELSLSLSEWYHDLVTDLTKSF--------MSVYNPTGAEPIPQNLIVNNTMNLTWE 181
Query: 220 VESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQ 279
V+ TYLLRI+N +F I H TVVE+D + T+ T+ + I Q VLV
Sbjct: 182 VQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVH 241
Query: 280 ANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYN 339
+ F + F+D + V LQ + A LP N + N+
Sbjct: 242 TKNDTDKNFAIMQKFDDTMLDV----IPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFL 297
Query: 340 KKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALL 399
P + + D + T+ D+ VN A NNI++ P+ L
Sbjct: 298 DDFYL--QPYEKEAIYGEPDHVI--TVDVVMDNLKNGVN----YAFFNNITYTAPKVPTL 349
Query: 400 QAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVL--QDT 457
V + G S T + + +E+VL QDT
Sbjct: 350 MT-------VLSS-------------GDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDT 389
Query: 458 NLLTVESHPFHLHGYNFFVV----------GTGIGNFDPVKYPA--NYNLVDPIERNTAA 505
+HPFHLHG+ F + G +FDP +PA Y P+ R+T
Sbjct: 390 G-----THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEY----PMRRDTLY 440
Query: 506 VPTGGWTAIRFRADNPGVWFMHCHLELH 533
V IRF+ADNPGVWF HCH+E H
Sbjct: 441 VRPQSNFVIRFKADNPGVWFFHCHIEWH 468
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 143/293 (48%), Gaps = 22/293 (7%)
Query: 33 KKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHG 91
++Y V+ ++ + + +T NG PGP I GD ++++VTN+ ++N SIHWHG
Sbjct: 68 REYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHG 127
Query: 92 LKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR--ATVYGAIVI 149
++Q + DG +TQCPI G++ TY F VT Q GT W+H+H F L+ ++G ++I
Sbjct: 128 IRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSH-FSLQYGDGLFGPLII 185
Query: 150 MXXXXXXXXXXXXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFP 209
VI L +W H V E+ ++G PP + + +NG F
Sbjct: 186 NGPATADYDEDVG----VIFLQDWAHESVFEIWDTA-RLGAPPALENT-LMNGTN--TFD 237
Query: 210 CSEK---------HTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKP 260
CS F + G Y LR+IN ++ FAI H TV+ D V P
Sbjct: 238 CSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297
Query: 261 FTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYK 313
+TT+ +LI GQ +V+V+AN Y++ + ATGIL+Y
Sbjct: 298 YTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYD 350
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 465 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVW 524
HP HLHG++FF+V F+ + PA +NLV+P R+ AA+P G+ AI F+ DNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 525 FMHCHLELHTGWGLKTAF 542
+HCH+ H GL F
Sbjct: 523 LLHCHIAWHASEGLAMQF 540
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 143/293 (48%), Gaps = 22/293 (7%)
Query: 33 KKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHG 91
++Y V+ ++ + + +T NG PGP I GD ++++VTN+ ++N SIHWHG
Sbjct: 68 REYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHG 127
Query: 92 LKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR--ATVYGAIVI 149
++Q + DG +TQCPI G++ TY F VT Q GT W+H+H F L+ ++G ++I
Sbjct: 128 IRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSH-FSLQYGDGLFGPLII 185
Query: 150 MXXXXXXXXXXXXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFP 209
VI L +W H V E+ ++G PP + + +NG F
Sbjct: 186 NGPATADYDEDVG----VIFLQDWAHESVFEIWDTA-RLGAPPALENT-LMNGTN--TFD 237
Query: 210 CSEK---------HTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKP 260
CS F + G Y LR+IN ++ FAI H TV+ D V P
Sbjct: 238 CSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297
Query: 261 FTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYK 313
+TT+ +LI GQ +V+V+AN Y++ + ATGIL+Y
Sbjct: 298 YTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYD 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%)
Query: 465 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVW 524
HP HLHG++FF+V F+ + PA +NLV+P R+ AA+P G+ AI F+ DNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 525 FMHCHLELHTGWGLKTAF 542
+HCH+ H G+ F
Sbjct: 523 LLHCHIAWHASEGMAMQF 540
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 131/281 (46%), Gaps = 12/281 (4%)
Query: 53 IVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNGWADGPAYITQCPI 111
++ VN + GPTI GD + V V N+ + N S+HWHGL+Q N + DG +T+CPI
Sbjct: 98 VMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPI 157
Query: 112 K-TGNSYTYDFNVTGQRGTLWWHAHIFWLRATVYGAIVIMXXXXXXXXXXXXNRE-EVIL 169
G TY F T Q GT W+H+H + YG V+ + + V
Sbjct: 158 PPKGGRKTYKFRAT-QYGTSWYHSHF----SAQYGNGVVGTIQIDGPASLPYDIDLGVFP 212
Query: 170 LGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLR 229
L ++++ +E+ Q G PP SD NG + + + GK + LR
Sbjct: 213 LMDYYYRSADELVHFTQSNGAPP--SDNVLFNGT-ARHPETGAGQWYNVTLTPGKRHRLR 269
Query: 230 IINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFM 289
IIN + ++ ++ GHN TV+ D V FT ++ +A GQ +V + AN G Y+
Sbjct: 270 IINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWF 329
Query: 290 AARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASN 330
+ +NK I +Y+G P + LPT LP N
Sbjct: 330 NVTFGDGLCGSSNNKFPAAIFRYQGAP-ATLPTDQGLPVPN 369
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 457 TNLLTVESHPFHLHGYNFFVVG--------TGIGN-FDPVKYPANYNLVDPIERNTAAVP 507
TN + HP HLHG++F V+G G+ + FDP K +P+ R+ +P
Sbjct: 464 TNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLP 523
Query: 508 TGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAF 542
GGW + F+ DNPG W HCH+ H GL F
Sbjct: 524 AGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDF 558
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 21/264 (7%)
Query: 33 KKYQFDVQVKNVSRLCHAKP---IVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHW 89
+K +FD+ +++ + K NG+ P P I+V EGD V VNVTN +IHW
Sbjct: 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHW 60
Query: 90 HGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI-FWLRATVYG--A 146
HG+ Q +DG + TQ I+ G+++TY F GT+W+H H+ T+ G
Sbjct: 61 HGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAE-PAGTMWYHCHVNVNEHVTMRGMWG 119
Query: 147 IVIMXXXXXXXXXXXXNREEVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGP 206
+I+ ++ +++L +W V + + G+P ++ D +TIN K P
Sbjct: 120 PLIVEPKNPLPIEKTVTKDYILMLSDW----VSSWANKPGEGGIPGDVFDYYTINAKSFP 175
Query: 207 LFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAV-YTKPFTTEA 265
T + V+ G LR+I A + GH + D KP +
Sbjct: 176 -------ETQPIRVKKGDVIRLRLIGAGDHVHAIHT-HGHISQIAFKDGFPLDKPIKGDT 227
Query: 266 ILIAPGQTTNVLVQANQKPGRYFM 289
+LI PG+ +V++ + PG + +
Sbjct: 228 VLIGPGERYDVILNMDN-PGLWMI 250
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 482 GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLK 539
G+ + + + L PI+ +T + G + DNPG+W +H H++ HT G K
Sbjct: 206 GHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDK 263
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 13/241 (5%)
Query: 53 IVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNGWADGPAYITQCPI 111
++ +NG GP I GD V V V N+ N SIHWHG+ Q DG +T+CPI
Sbjct: 57 VMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPI 116
Query: 112 K-TGNSYTYDFNVTGQRGTLWWHAHIFWLRATVYGAIVIMXXXXXXXXXXXXNRE-EVIL 169
G TY + Q GT W+H+H + YG V+ + + V
Sbjct: 117 PPKGGQRTYRWRAR-QYGTSWYHSHF----SAQYGNGVVGTIQINGPASLPYDIDLGVFP 171
Query: 170 LGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFA-MEVESGKTYLL 228
+ ++++ +++ Q P SD ING + P + + +A + + GK + L
Sbjct: 172 ITDYYYRAADDLVHFTQNNAPP--FSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRL 227
Query: 229 RIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYF 288
RI+N + + ++ H TV+ D V T +++ +A GQ +V++ A++ P Y+
Sbjct: 228 RILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYW 287
Query: 289 M 289
Sbjct: 288 F 288
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 465 HPFHLHGYNFFVVGTGIGN---------FDPVKYPANYNLVDPIERNTAAVPTGGWTAIR 515
HP HLHG++F V+G FDP A N +P R+T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 516 FRADNPGVWFMHCHLELHTGWGLKTAF 542
FR DNPG W HCH+ H GL F
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDF 517
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 13/241 (5%)
Query: 53 IVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNGWADGPAYITQCPI 111
++ +NG GP I GD V V V N+ N SIHWHG+ Q DG +T+CPI
Sbjct: 57 VMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPI 116
Query: 112 K-TGNSYTYDFNVTGQRGTLWWHAHIFWLRATVYGAIVIMXXXXXXXXXXXXNRE-EVIL 169
G TY + Q GT W+H+H + YG V+ + + V
Sbjct: 117 PPKGGQRTYRWRAR-QYGTSWYHSHF----SAQYGNGVVGTIQINGPASLPYDIDLGVFP 171
Query: 170 LGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFA-MEVESGKTYLL 228
+ ++++ +++ Q P SD ING + P + + +A + + GK + L
Sbjct: 172 ITDYYYRAADDLVHFTQNNAPP--FSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRL 227
Query: 229 RIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYF 288
RI+N + + ++ H TV+ D V T +++ +A GQ +V++ A++ P Y+
Sbjct: 228 RILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYW 287
Query: 289 M 289
Sbjct: 288 F 288
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 465 HPFHLHGYNFFVVGTGIGN---------FDPVKYPANYNLVDPIERNTAAVPTGGWTAIR 515
HP HLHG++F V+G FDP A N +P R+T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 516 FRADNPGVWFMHCHLELHTGWGLKTAF 542
FR DNPG W HCH+ H GL F
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDF 517
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 13/241 (5%)
Query: 53 IVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNGWADGPAYITQCPI 111
++ +NG GP I GD V V V N+ N SIHWHG+ Q DG +T+CPI
Sbjct: 57 VMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPI 116
Query: 112 K-TGNSYTYDFNVTGQRGTLWWHAHIFWLRATVYGAIVIMXXXXXXXXXXXXNRE-EVIL 169
G TY + Q GT W+H+H + YG V+ + + V
Sbjct: 117 PPKGGQRTYRWRAR-QYGTSWYHSHF----SAQYGNGVVGTIQINGPASLPYDIDLGVFP 171
Query: 170 LGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFA-MEVESGKTYLL 228
+ ++++ +++ Q P SD ING + P + + +A + + GK + L
Sbjct: 172 ITDYYYRAADDLVHFTQNNAPP--FSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRL 227
Query: 229 RIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYF 288
RI+N + + ++ H TV+ D V T +++ +A GQ +V++ A++ P Y+
Sbjct: 228 RILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYW 287
Query: 289 M 289
Sbjct: 288 F 288
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 465 HPFHLHGYNFFVVGTGIGN---------FDPVKYPANYNLVDPIERNTAAVPTGGWTAIR 515
HP HLHG++F V+G FDP A N +P R+T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 516 FRADNPGVWFMHCHLELHTGWGLKTAF 542
FR DNPG W HCH+ H GL F
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDF 517
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 27/250 (10%)
Query: 53 IVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIK 112
++T G FPGPT+ VR D V + + N ++HWHGL D P I
Sbjct: 37 LLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISPK--VDDPF----LEIP 90
Query: 113 TGNSYTYDFNVTGQ-RGTLWWHAHIF-----WLRATVYGAIVIMXXXXXXXXXXXXNREE 166
G S+TY+F V + GT W+H H+ L A + GA+V+
Sbjct: 91 PGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEHL 150
Query: 167 VILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTY 226
++L +++ QG G P + +NGK G L + + V T
Sbjct: 151 LVL---------KDLALQG---GRPAPHTPMDWMNGKEGDLVLVNGALRPTL-VAQKATL 197
Query: 227 LLRIINAALNDELFFAIAGHNFTVVEVDAVY-TKPFTTEAILIAPGQTTNVLVQANQKPG 285
LR++NA+ A+ H ++ D + +P +L+APG+ VLV+ +K G
Sbjct: 198 RLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEG 256
Query: 286 RYFMAARPFN 295
R+ + A P++
Sbjct: 257 RFLLQALPYD 266
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 102/500 (20%), Positives = 182/500 (36%), Gaps = 100/500 (20%)
Query: 55 TVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTG 114
T NG P P I V EGD++ + V N + +IHWHG+ + DG + PI G
Sbjct: 74 TYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPD--QDGSPH---DPILAG 128
Query: 115 NSYTYDFNV-TGQRGTLWWHAHIFWLRAT-----VYGAIVIMXXXXXXXXXXXXNREEVI 168
Y F + GT W+H H + + + GA VI +E+ +
Sbjct: 129 EERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL----KEKDL 184
Query: 169 LLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLL 228
++ + + ++ PN + +NG+ G + + F +++ +
Sbjct: 185 MISDLRLDENAQI----------PNNNLNDWLNGREGEFVLINGQ--FKPKIKLATNERI 232
Query: 229 RIINAALNDELFFAIAGHNFTVVEVD-AVYTKPFTTEAILIAPGQTTNVLVQANQKPGRY 287
RI NA L I G F +V D + K E + ++P VL+ A K G +
Sbjct: 233 RIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNF 291
Query: 288 FMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNS 347
+ + ++ + V K PN+L F N N K ++
Sbjct: 292 KLESAYYDRDKMMV-----------KEEPNTL--------------FLANINLKKENVEL 326
Query: 348 PKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLK 407
PK + K F I +D ++G + + + + L+ ++LK
Sbjct: 327 PKNLKIFKPSEEPKEFKEIIMSEDHMQ--MHGM-MGKSEGELKIALASMFLINRKSYDLK 383
Query: 408 GVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPF 467
+ L++ LG +V+ +++ HPF
Sbjct: 384 RI------------------DLSSKLGVVEDW------------IVINKSHM----DHPF 409
Query: 468 HLHGYNFFVVGTGI-GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFM 526
H+HG F ++ + + G ++ A R+T V +R + D G+
Sbjct: 410 HIHGTQFELISSKLNGKVQKAEFRA--------LRDTINVRPNEELRLRMKQDFKGLRMY 461
Query: 527 HCHLELHTGWGLKTAFAVED 546
HCH+ H G+ V++
Sbjct: 462 HCHILEHEDLGMMGNLEVKE 481
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 55 TVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTG 114
+ NGR PGPT++ REGD + ++ TN + +IH+HG+ + DG I I G
Sbjct: 58 SYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIGAGSIAPG 114
Query: 115 NSYTYDFNVTGQRGTLWWHAH 135
S+TY+F+ T GT +H H
Sbjct: 115 QSFTYEFDAT-PFGTHLYHCH 134
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 95/246 (38%), Gaps = 34/246 (13%)
Query: 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADG--PAYITQCPIKTGNSYTYD 120
PTI +R G RV + + N +HWHG + W + P++ I G SY Y
Sbjct: 38 PTIILRRGQRVDMTLKNKLTEPTIVHWHG---FDVNWHNDAHPSF----AITPGESYNYS 90
Query: 121 FNVTGQRGTLWWHAHIFWLRATVY-----GAIVIMXXXXXXXXXXXXNREEVILLGEWWH 175
F+V + GT +H H L A + G +++ N +++ +
Sbjct: 91 FDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSDLGFKYGVNDLPLVISDRRFI 150
Query: 176 TDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAAL 235
+M + + +A +NG +F SG +Y LR++N +
Sbjct: 151 GGAPVYNPTPMEM-IAGFLGNAVLVNGVKDAVFKL-----------SGGSYRLRLVNGSN 198
Query: 236 NDELFFAIAGHNFTVVEVDAV------YTKPFTTEAILIAPGQTTNVLVQANQKPGRYFM 289
+I N VV + + +P A+ +AP + V+V+ + G Y +
Sbjct: 199 ARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELGE--GVYLL 256
Query: 290 AARPFN 295
PF+
Sbjct: 257 KNTPFD 262
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 107/516 (20%), Positives = 181/516 (35%), Gaps = 91/516 (17%)
Query: 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS 116
NG GP + ++ G V V++ N ++HWHGL+ G DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QGIIPPGGK 96
Query: 117 YTYDFNVTGQRGTLWWHAHIF-----WLRATVYGAIVIMXXXXXXXXXXXXNREEV--IL 169
+ NV T W+H H + + G +VI +E+ ++
Sbjct: 97 RSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVI-------------EDDEILKLM 143
Query: 170 LGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAM--EVESGKTYL 227
L + W D V Q +K + + F + A+ + + + +L
Sbjct: 144 LPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPRGWL 203
Query: 228 -LRIINAALNDELFFAIAGHN--FTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ-K 283
LR++N L FA + + + + + +P + + G+ VLV+ N K
Sbjct: 204 RLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK 263
Query: 284 P--------GRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSL--LPTLAQLPASNDSE 333
P + MA PF D P PV I +P++L LP L L +
Sbjct: 264 PFDLVTLPVSQMGMAIAPF-DKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRK 322
Query: 334 FALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVM 393
L+ + L S S Q + K G + +A +++ S +M
Sbjct: 323 LQLSMDPSLDSSGS--------QSLSEKY----------------GDQAMAGMDH-SQMM 357
Query: 394 PQTALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELV 453
++ N G F P+ A + + + + +++
Sbjct: 358 GHMGHGNMNHMNHGGKFDFHHANKINGQAFDMNKPMFA----AAKGQYERWVISGVGDMM 413
Query: 454 LQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTA 513
L HPFH+HG F ++ P + A + +E N + V
Sbjct: 414 L----------HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------L 455
Query: 514 IRFRADNPG--VWFMHCHLELHTGWGLKTAFAVEDG 547
++F D P + HCHL H G+ F V G
Sbjct: 456 VKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVLQG 491
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 119/322 (36%), Gaps = 42/322 (13%)
Query: 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS 116
NG GP + ++ G V V++ N ++HWHGL+ G DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QGIIPPGGK 96
Query: 117 YTYDFNVTGQRGTLWWHAHIF-----WLRATVYGAIVIMXXXXXXXXXXXXNREEV--IL 169
+ NV T W+H H + + G +VI +E+ ++
Sbjct: 97 RSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVI-------------EDDEILKLM 143
Query: 170 LGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAM--EVESGKTYL 227
L + W D V Q +K + + F + A+ + + + +L
Sbjct: 144 LPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPRGWL 203
Query: 228 -LRIINAALNDELFFAIAGHN--FTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ-K 283
LR++N L FA + + + + + +P + + G+ VLV+ N K
Sbjct: 204 RLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK 263
Query: 284 P--------GRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSL--LPTLAQLPASNDSE 333
P + MA PF D P PV I +P++L LP L L +
Sbjct: 264 PFDLVTLPVSQMGMAIAPF-DKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRK 322
Query: 334 FALNYNKKLRSLNSPKFPADVP 355
L+ + +N F + P
Sbjct: 323 LQLSMDGGANKINGQAFDMNKP 344
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 465 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 522
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 367 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 418
Query: 523 VWFMHCHLELHTGWGLKTAFAV 544
+ HCHL H G+ F V
Sbjct: 419 AYMAHCHLLEHEDTGMMLGFTV 440
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS 116
NG GP + ++ G V V++ N ++HWHGL+ G DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QGIIPPGGK 96
Query: 117 YTYDFNVTGQRGTLWWHAH 135
+ NV T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 465 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 522
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 523 VWFMHCHLELHTGWGLKTAFAV 544
+ HCHL H G+ F V
Sbjct: 467 AYMAHCHLLEHEDTGMMLGFTV 488
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS 116
NG GP + ++ G V V++ N ++HWHGL+ G DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QGIIPPGGK 96
Query: 117 YTYDFNVTGQRGTLWWHAH 135
+ NV T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 465 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 522
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 523 VWFMHCHLELHTGWGLKTAFAV 544
+ HCHL H G+ F V
Sbjct: 467 AYMAHCHLLEHEDTGMMLGFTV 488
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS 116
NG GP + ++ G V V++ N ++HWHGL+ G DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QGIIPPGGK 96
Query: 117 YTYDFNVTGQRGTLWWHAH 135
+ NV T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 465 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 522
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 523 VWFMHCHLELHTGWGLKTAFAV 544
+ H HL H G+ F V
Sbjct: 467 AYMAHSHLLEHQDTGMMLGFTV 488
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS 116
NG GP + ++ G V V++ N ++HWHGL+ G DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QGIIPPGGK 96
Query: 117 YTYDFNVTGQRGTLWWHAH 135
+ NV T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
Query: 465 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 522
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 523 VWFMHCHLELHTGWGLKTAFAVEDG 547
+ HCHL H G+ F V G
Sbjct: 467 AYMAHCHLLEHEDTGMMLGFTVLQG 491
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS 116
NG GP + ++ G V V++ N ++HWHGL+ G DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QGIIPPGGK 96
Query: 117 YTYDFNVTGQRGTLWWHAH 135
+ NV T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
Query: 465 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 522
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 523 VWFMHCHLELHTGWGLKTAFAVEDG 547
+ HCHL H G+ F V G
Sbjct: 467 AYMAHCHLLEHDDTGMMLGFTVLQG 491
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS 116
NG GP + ++ G V V++ N ++HWHGL+ G DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QGIIPPGGK 96
Query: 117 YTYDFNVTGQRGTLWWHAH 135
+ NV T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 465 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 522
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 523 VWFMHCHLELHTGWGLKTAFAVEDG 547
+ H HL H G+ F V G
Sbjct: 467 AYMAHSHLLEHEDTGMMLGFTVLQG 491
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 465 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 522
H FHLHG+ + TG+ +DP L+D + N + G+ I PG
Sbjct: 212 HTFHLHGHRWLDNRTGMRTSEYDPSP------LIDIKDLNPGV--SFGFQVIAGEGVGPG 263
Query: 523 VWFMHCHLELHTGWGLKTAFAVEDGPG 549
+W HCH++ H+ G+ F V + G
Sbjct: 264 MWMYHCHVQNHSDMGMAGMFLVRNADG 290
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 19/84 (22%)
Query: 462 VESHPFHLHGYNFFVVGTGIGNFDPVK-YPANYNLVDPIERNTAAVPTGGWTAIRFRADN 520
++ H H HG++F G+ + D +P Y ++ R
Sbjct: 991 IDLHTVHFHGHSFQYKHRGVYSSDVFDIFPGTYQTLEMFPRT------------------ 1032
Query: 521 PGVWFMHCHLELHTGWGLKTAFAV 544
PG+W +HCH+ H G++T + V
Sbjct: 1033 PGIWLLHCHVTDHIHAGMETTYTV 1056
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 60 FPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYR 96
F GP I GD+V V++ N A + H HG+ Y+
Sbjct: 92 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYK 128
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 19/84 (22%)
Query: 462 VESHPFHLHGYNFFVVGTGIGNFDPVK-YPANYNLVDPIERNTAAVPTGGWTAIRFRADN 520
++ H H HG++F G+ + D +P Y ++ R
Sbjct: 972 IDLHTVHFHGHSFQYKHRGVYSSDVFDIFPGTYQTLEMFPRT------------------ 1013
Query: 521 PGVWFMHCHLELHTGWGLKTAFAV 544
PG+W +HCH+ H G++T + V
Sbjct: 1014 PGIWLLHCHVTDHIHAGMETTYTV 1037
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 60 FPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYR 96
F GP I GD+V V++ N A + H HG+ Y+
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYK 109
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Query: 35 YQFDVQVKNVSRLCH----AKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWH 90
+ ++V++K + + + +V +G PGPT V G +V N+A+ S+H H
Sbjct: 37 WYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLH 96
Query: 91 G--LKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRA 141
G + +GWA+ IT+ G+ Y + TLW+H H + A
Sbjct: 97 GSFSRAAFDGWAED---ITEP----GSFKDYYYPNRQSARTLWYHDHAMHITA 142
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 21/116 (18%)
Query: 441 LSKIAFNSTIELVLQDTNLLTVE-----------SHPFHLHGYNFFVVGTGIGNFDPVKY 489
++ +AF +L + + TVE +HP H+H +F V+ GN
Sbjct: 363 INGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVM 422
Query: 490 PANYNLVDPI---ERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAF 542
P L D + R T V A PGV+ HCH +H + AF
Sbjct: 423 PYESGLKDVVWLGRRETVVVEA-------HYAPFPGVYMFHCHNLIHEDHDMMAAF 471
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 465 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 522
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 193 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 244
Query: 523 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 554
W HCH++ H+ G+ F V+ PD ++
Sbjct: 245 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 273
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 22/108 (20%)
Query: 61 PGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYD 120
PGP I V EGD + + TN S+H HGL + +DG A + + ++ G + TY
Sbjct: 37 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDAEIS--SDGTA-MNKSDVEPGGTRTYT 93
Query: 121 FNVT--GQR--GTL------WWHAH---------IFWLRATVYGAIVI 149
+ G+R GT +WH H +R +YG +++
Sbjct: 94 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIV 141
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 54 VTVNGRFP--GPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCP 110
+T+N R P GP GDRV + + H +Y + H HG + WAD I P
Sbjct: 160 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGP 213
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 465 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 522
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 194 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 245
Query: 523 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 554
W HCH++ H+ G+ F V+ PD ++
Sbjct: 246 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 274
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 22/108 (20%)
Query: 61 PGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYD 120
PGP I V EGD + + TN S+H HGL + +DG A + + ++ G + TY
Sbjct: 38 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDFEIS--SDGTA-MNKSDVEPGGTRTYT 94
Query: 121 FNVT--GQR--GTL------WWHAH---------IFWLRATVYGAIVI 149
+ G+R GT +WH H +R +YG +++
Sbjct: 95 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIV 142
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 54 VTVNGRFP--GPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCP 110
+T+N R P GP GDRV + + H +Y + H HG + WAD I P
Sbjct: 161 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGP 214
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 465 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 522
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 231 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 282
Query: 523 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 554
W HCH++ H+ G+ F V+ PD ++
Sbjct: 283 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 311
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 22/108 (20%)
Query: 61 PGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYD 120
PGP I V EGD + + TN S+H HGL + +DG A + + ++ G + TY
Sbjct: 75 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MNKSDVEPGGTRTYT 131
Query: 121 FNVT--GQR--GTL------WWHAH---------IFWLRATVYGAIVI 149
+ G+R GT +WH H +R +YG +++
Sbjct: 132 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIV 179
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 54 VTVNGRFP--GPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCP 110
+T+N R P GP GDRV + + H +Y + H HG + WAD I P
Sbjct: 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGP 251
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 465 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 522
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 190 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 241
Query: 523 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 554
W HCH++ H+ G+ F V+ PD ++
Sbjct: 242 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 270
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 22/108 (20%)
Query: 61 PGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYD 120
PGP I V EGD + + TN S+H HGL + +DG A + + ++ G + TY
Sbjct: 34 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MNKSDVEPGGTRTYT 90
Query: 121 FNVT--GQR--GTL------WWHAH---------IFWLRATVYGAIVI 149
+ G+R GT +WH H +R +YG +++
Sbjct: 91 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIV 138
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 54 VTVNGRFP--GPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCP 110
+T+N R P GP GDRV + + H +Y + H HG + WAD I P
Sbjct: 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGP 210
>pdb|1SDD|A Chain A, Crystal Structure Of Bovine Factor Vai
Length = 306
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 51 KPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQC- 109
KP +G GPT+Y GD + V+ N A +SIH G+K + +++G +Y
Sbjct: 49 KPQSRTSGLL-GPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSK--FSEGASYSDHTL 105
Query: 110 -------PIKTGNSYTYDFNVTGQRG 128
+ G YTY++ ++ G
Sbjct: 106 PMEKMDDAVAPGQEYTYEWIISEHSG 131
>pdb|2XX0|A Chain A, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
pdb|2XX0|B Chain B, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M S+ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG 95
>pdb|2XX1|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|B Chain B, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|D Chain D, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|E Chain E, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|F Chain F, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M S+ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG 95
>pdb|2XXG|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
pdb|2XXG|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
Length = 336
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M S+ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG 95
>pdb|2UXT|A Chain A, Sufi Protein From Escherichia Coli
pdb|2UXT|B Chain B, Sufi Protein From Escherichia Coli
pdb|2UXV|A Chain A, Sufi Protein From Escherichia Coli
pdb|2UXV|B Chain B, Sufi Protein From Escherichia Coli
Length = 451
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 56 VNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGN 115
+NGR+ GPTI V +GD V + +N N+S+ GL Q GPA + +
Sbjct: 43 INGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGL-QVPGPLMGGPARM----MSPNA 97
Query: 116 SYTYDFNVTGQRGTLWWHAH 135
+ + TLW+HA+
Sbjct: 98 DWAPVLPIRQNAATLWYHAN 117
>pdb|2BO0|A Chain A, Crystal Structure Of The C130a Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHGLKQYRNGWADGPAYITQCPI 111
+T NG PGPT+ V EGD V + + N A M ++ +HG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG-----ALGGAKLTN--V 108
Query: 112 KTGNSYTYDFNVTGQRGTLWWHA 134
G T F + GT +HA
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHA 130
>pdb|1GS8|A Chain A, Crystal Structure Of Mutant D92n Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++++HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVNFHG 95
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 465 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 522
H FHLHG+ + TG+ G DP + N + P + + G+ I G
Sbjct: 196 HTFHLHGHRWADNRTGMLTGPDDPSQVIDN-KICGPAD-------SFGFQVIAGEGVGAG 247
Query: 523 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 554
W HCH++ H+ G+ F V+ PD ++
Sbjct: 248 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 276
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 60 FPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGN--SY 117
PGP I + EGD + + N +S+H HGL + +DG ++ ++ G +Y
Sbjct: 39 IPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTKQ-SRSDVEPGGTRTY 95
Query: 118 TYDFNVTGQRGTLWWHA 134
T+ +V G+R W A
Sbjct: 96 TWRTHVPGRRADGTWRA 112
>pdb|1OE2|A Chain A, Atomic Resolution Structure Of D92e Mutant Of
Alcaligenes Xylosoxidans Nitrite Reductase
Length = 336
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVEFHG 95
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From
Streptomyces Venezueale In Complex With D-glucose.
pdb|4I3G|B Chain B, Crystal Structure Of Desr, A Beta-glucosidase From
Streptomyces Venezueale In Complex With D-glucose
Length = 829
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 294 FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSE---FALNYNKKLRSLNSPKF 350
F++ P+ V ++TA + Q KGI + L T A+ A+N+ E F++N N ++L +F
Sbjct: 168 FSEDPL-VSSRTA--VAQIKGIQGAGLMTTAKHFAANNQENNRFSVNANVDEQTLREIEF 224
Query: 351 PA-DVPQKVDRKLFYTIGFGKDSCPTCVN 378
PA + K F G + P+C N
Sbjct: 225 PAFEASSKAGAASFMCAYNGLNGKPSCGN 253
>pdb|1NDT|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 336
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2VMJ|A Chain A, Type 1 Copper-Binding Loop Of Nitrite Reductase Mutant:
130- Capegmvpwhvvsgm-144 To 130-Ctphpfm-136
Length = 329
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 57 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 96
>pdb|1WA0|X Chain X, Crystal Structure Of W138h Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1WA1|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
pdb|1WA2|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase With Nitrite Bound
Length = 336
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1WAE|A Chain A, Crystal Structure Of H129v Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1GS7|A Chain A, Crystal Structure Of H254f Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2XXF|A Chain A, Cu Metallated H254f Mutant Of Nitrite Reductase
pdb|2XXF|B Chain B, Cu Metallated H254f Mutant Of Nitrite Reductase
Length = 336
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2VN3|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 337
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 57 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 96
>pdb|2JFC|A Chain A, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|B Chain B, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|C Chain C, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|D Chain D, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|E Chain E, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|F Chain F, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
Length = 335
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 55 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 94
>pdb|2BP0|A Chain A, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2BP0|B Chain B, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1BQ5|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans Gifu 1051
Length = 342
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 62 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 101
>pdb|1OE1|A Chain A, Atomic Resolution Structure Of The Wildtype Native
Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1OE3|A Chain A, Atomic Resolution Structure Of 'half Apo' Nir
Length = 336
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2XWZ|A Chain A, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|B Chain B, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|C Chain C, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|D Chain D, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|E Chain E, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|F Chain F, Structure Of The Recombinant Native Nitrite Reductase
From Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2BP8|A Chain A, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|2BP8|B Chain B, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1GS6|X Chain X, Crystal Structure Of M144a Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|1HAU|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At
High Ph And In Copper Free Form At 1.9 A Resolution
pdb|1HAW|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At
High Ph And In Copper Free Form At 1.9a Resolution
pdb|2VM3|A Chain A, Structure Of Alcaligenes Xylosoxidans In Space Group R3
- 1 Of 2
pdb|2VM4|A Chain A, Structure Of Alcaligenes Xylosoxidans Nitrite Reductase
In Space Group R3 - 2 Of 2
pdb|2VW4|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW4|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW6|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW6|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW7|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2VW7|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2ZON|A Chain A, Crystal Structure Of Electron Transfer Complex Of
Nitrite Reductase With Cytochrome C
pdb|2ZON|B Chain B, Crystal Structure Of Electron Transfer Complex Of
Nitrite Reductase With Cytochrome C
pdb|2ZON|C Chain C, Crystal Structure Of Electron Transfer Complex Of
Nitrite Reductase With Cytochrome C
Length = 336
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWHG 91
+T NG PGPT+ V EGD V + + N A M ++ +HG
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 45/210 (21%)
Query: 62 GPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKT-------- 113
GPTI D V++ + N A + +S+H G+ ++ ++G Y Q +
Sbjct: 73 GPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREKEDDKVFP 130
Query: 114 GNSYTYDFNVTGQRG---------TLWWHAHIFW---LRATVYGAIVIMXXXXXXXXXXX 161
G S+TY + V + G T + +H+ L + + GA+++
Sbjct: 131 GGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQ 190
Query: 162 XNREEVILL-----GEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGK-----PGPLFPCS 211
+ ++L G+ WH++ + Q + HT+NG PG L C
Sbjct: 191 TLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNRSLPG-LIGCH 249
Query: 212 EK----HTFAM----EVES----GKTYLLR 229
K H M EV S G T+L+R
Sbjct: 250 RKSVYWHVIGMGTTPEVHSIFLEGHTFLVR 279
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 62 GPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWA----DGPAYITQCPIKTGNSY 117
GP +Y GD +L+ N A +I+ HG+ R ++ G ++ PI G +
Sbjct: 450 GPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPILPGEIF 509
Query: 118 TYDFNVTGQRG 128
Y + VT + G
Sbjct: 510 KYKWTVTVEDG 520
>pdb|1NDR|A Chain A, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|B Chain B, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|C Chain C, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|A Chain A, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|B Chain B, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|C Chain C, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 330
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Query: 28 AEAAIKKYQFDVQVKNVSRLCH----AKPIVTVNGRFPGPTIYVREGDRV---LVN-VTN 79
A A K QF + ++ + +T NG PGPT+ V EGD + LVN TN
Sbjct: 22 AAGAPKVVQFRMSIEEKKMVADDDGTTAQAMTFNGSVPGPTLVVHEGDYIELTLVNPATN 81
Query: 80 HAQYNMSIH 88
+N+ H
Sbjct: 82 SMPHNVDFH 90
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 45/210 (21%)
Query: 62 GPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKT-------- 113
GPTI D V++ + N A + +S+H G+ ++ ++G Y Q +
Sbjct: 74 GPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREKEDDKVFP 131
Query: 114 GNSYTYDFNVTGQRG---------TLWWHAHIFW---LRATVYGAIVIMXXXXXXXXXXX 161
G S+TY + V + G T + +H+ L + + GA+++
Sbjct: 132 GGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQ 191
Query: 162 XNREEVILL-----GEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGK-----PGPLFPCS 211
+ ++L G+ WH++ + Q + HT+NG PG L C
Sbjct: 192 TLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNRSLPG-LIGCH 250
Query: 212 EK----HTFAM----EVES----GKTYLLR 229
K H M EV S G T+L+R
Sbjct: 251 RKSVYWHVIGMGTTPEVHSIFLEGHTFLVR 280
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 62 GPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWA----DGPAYITQCPIKTGNSY 117
GP +Y GD +L+ N A +I+ HG+ R ++ G ++ PI G +
Sbjct: 451 GPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPILPGEIF 510
Query: 118 TYDFNVTGQRG 128
Y + VT + G
Sbjct: 511 KYKWTVTVEDG 521
>pdb|4AKQ|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: E498d Mutant
Length = 513
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 30/152 (19%)
Query: 27 PAEAAIKKYQFDVQVKNVSRLCHAKPIVT----VNGRFPGPTIYVREGDRVLVNVTNHAQ 82
P + + +K ++V ++ + H T NG FPGPTI V+ + V V N+
Sbjct: 18 PVQQSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLP 77
Query: 83 YNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS-----------YTYDFNVTG------ 125
+ + + + P T + G + ++ DF TG
Sbjct: 78 STHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKRE 137
Query: 126 -------QRGT-LWWHAHIFWL-RATVYGAIV 148
QRG LW+H H L R VY +V
Sbjct: 138 VYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
>pdb|2DV6|A Chain A, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|B Chain B, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|C Chain C, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|D Chain D, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|E Chain E, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|F Chain F, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
Length = 447
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 55 TVNGRFPGPTIYVREGDRVLVNVTNHAQYNM--SIHWH 90
T NG+ PGP + VR GD V +++ NH M S+ +H
Sbjct: 187 TFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFH 224
>pdb|1GSK|A Chain A, Crystal Structure Of Cota, An Endospore Coat Protein From
Bacillus Subtilis
pdb|1OF0|A Chain A, Crystal Structure Of Bacillus Subtilis Cota After 1h
Soaking With Ebs
pdb|1W6L|A Chain A, 3d Structure Of Cota Incubated With Cucl2
pdb|1W6W|A Chain A, 3d Structure Of Cota Incubated With Sodium Azide
pdb|1W8E|A Chain A, 3d Structure Of Cota Incubated With Hydrogen Peroxide
pdb|2BHF|A Chain A, 3d Structure Of The Reduced Form Of Cota
pdb|2X88|A Chain A, Crystal Structure Of Holocota
pdb|3ZDW|A Chain A, Substrate And Dioxygen Binding To The Endospore Coat
Laccase Cota From Bacillus Subtilis
Length = 513
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 30/152 (19%)
Query: 27 PAEAAIKKYQFDVQVKNVSRLCHAKPIVT----VNGRFPGPTIYVREGDRVLVNVTNHAQ 82
P + + +K ++V ++ + H T NG FPGPTI V+ + V V N+
Sbjct: 18 PVQQSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLP 77
Query: 83 YNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS-----------YTYDFNVTG------ 125
+ + + + P T + G + ++ DF TG
Sbjct: 78 STHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKRE 137
Query: 126 -------QRGT-LWWHAHIFWL-RATVYGAIV 148
QRG LW+H H L R VY +V
Sbjct: 138 VYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
>pdb|4A68|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116n Mutant
Length = 513
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 30/152 (19%)
Query: 27 PAEAAIKKYQFDVQVKNVSRLCHAKPIVT----VNGRFPGPTIYVREGDRVLVNVTNHAQ 82
P + + +K ++V ++ + H T NG FPGPTI V+ + V V N+
Sbjct: 18 PVQQSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLP 77
Query: 83 YNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS-----------YTYDFNVTG------ 125
+ + + + P T + G + ++ DF TG
Sbjct: 78 STHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSNGYPEAWFSKDFEQTGPYFKRE 137
Query: 126 -------QRGT-LWWHAHIFWL-RATVYGAIV 148
QRG LW+H H L R VY +V
Sbjct: 138 VYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
>pdb|4A66|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116a Mutant
Length = 513
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 30/152 (19%)
Query: 27 PAEAAIKKYQFDVQVKNVSRLCHAKPIVT----VNGRFPGPTIYVREGDRVLVNVTNHAQ 82
P + + +K ++V ++ + H T NG FPGPTI V+ + V V N+
Sbjct: 18 PVQQSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLP 77
Query: 83 YNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS-----------YTYDFNVTG------ 125
+ + + + P T + G + ++ DF TG
Sbjct: 78 STHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSAGYPEAWFSKDFEQTGPYFKRE 137
Query: 126 -------QRGT-LWWHAHIFWL-RATVYGAIV 148
QRG LW+H H L R VY +V
Sbjct: 138 VYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
>pdb|2X87|A Chain A, Crystal Structure Of The Reconstituted Cota
Length = 513
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 30/152 (19%)
Query: 27 PAEAAIKKYQFDVQVKNVSRLCHAKPIVT----VNGRFPGPTIYVREGDRVLVNVTNHAQ 82
P + + +K ++V ++ + H T NG FPGPTI V+ + V V N+
Sbjct: 18 PVQQSKEKTYYEVTMEEXTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLP 77
Query: 83 YNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS-----------YTYDFNVTG------ 125
+ + + + P T + G + ++ DF TG
Sbjct: 78 STHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKRE 137
Query: 126 -------QRGT-LWWHAHIFWL-RATVYGAIV 148
QRG LW+H H L R VY +V
Sbjct: 138 VYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
>pdb|2WSD|A Chain A, Proximal Mutations At The Type 1 Cu Site Of Cota-Laccase:
I494a Mutant
Length = 513
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 30/152 (19%)
Query: 27 PAEAAIKKYQFDVQVKNVSRLCHAKPIVT----VNGRFPGPTIYVREGDRVLVNVTNHAQ 82
P + + +K ++V ++ + H T NG FPGPTI V+ + V V N+
Sbjct: 18 PVQQSKEKTYYEVTMEEXTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLP 77
Query: 83 YNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS-----------YTYDFNVTG------ 125
+ + + + P T + G + ++ DF TG
Sbjct: 78 STHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKRE 137
Query: 126 -------QRGT-LWWHAHIFWL-RATVYGAIV 148
QRG LW+H H L R VY +V
Sbjct: 138 VYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
>pdb|4A67|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116e Mutant
Length = 513
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 30/152 (19%)
Query: 27 PAEAAIKKYQFDVQVKNVSRLCHAKPIVT----VNGRFPGPTIYVREGDRVLVNVTNHAQ 82
P + + +K ++V ++ + H T NG FPGPTI V+ + V V N+
Sbjct: 18 PVQQSKEKTYYEVTMEEXTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLP 77
Query: 83 YNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS-----------YTYDFNVTG------ 125
+ + + + P T + G + ++ DF TG
Sbjct: 78 STHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSEGYPEAWFSKDFEQTGPYFKRE 137
Query: 126 -------QRGT-LWWHAHIFWL-RATVYGAIV 148
QRG LW+H H L R VY +V
Sbjct: 138 VYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
>pdb|4AKP|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site:e498t Mutant
Length = 513
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 30/152 (19%)
Query: 27 PAEAAIKKYQFDVQVKNVSRLCHAKPIVT----VNGRFPGPTIYVREGDRVLVNVTNHAQ 82
P + + +K ++V ++ + H T NG FPGPTI V+ + V V N+
Sbjct: 18 PVQQSKEKTYYEVTMEEXTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLP 77
Query: 83 YNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNS-----------YTYDFNVTG------ 125
+ + + + P T + G + ++ DF TG
Sbjct: 78 STHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKRE 137
Query: 126 -------QRGT-LWWHAHIFWL-RATVYGAIV 148
QRG LW+H H L R VY +V
Sbjct: 138 VYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
>pdb|1UN2|A Chain A, Crystal Structure Of Circularly Permuted Cpdsba_q100t99
Preserved Global Fold And Local Structural Adjustments
Length = 197
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 16/150 (10%)
Query: 275 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQL-----PAS 329
+V + A K Y A F + + A +Q +G+P + QL S
Sbjct: 11 DVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLNPQGMDTS 70
Query: 330 NDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIG-----------FGKDSCPTCVN 378
N F Y ++ L+ K Q D K + T+ F CP C
Sbjct: 71 NMDVFVQQYADTVKYLSEKKGGGTGAQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQ 130
Query: 379 GTRLLATLNNISFVMPQTALLQAHYFNLKG 408
+L +N+ +P+ + ++ N G
Sbjct: 131 FEEVLHISDNVKKKLPEGVKMTKYHVNFMG 160
>pdb|3GYR|A Chain A, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|B Chain B, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|C Chain C, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|D Chain D, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|E Chain E, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|F Chain F, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|G Chain G, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|H Chain H, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|I Chain I, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|J Chain J, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|K Chain K, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|L Chain L, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center
Length = 612
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 57 NGRFPGPTIYVREGDRVLVNVTNH 80
+G+ PGPTI VR G RV + TN
Sbjct: 59 DGQVPGPTIEVRRGQRVRIAWTNR 82
>pdb|4AKO|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: E498l Mutant
Length = 507
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 22/114 (19%)
Query: 57 NGRFPGPTIYVREGDRVLVNVTN------------------HAQYNMSIHWHGLKQYRNG 98
NG FPGPTI V+ + V V N + +H HG +
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSEEPEVKTVVHLHGGVTPDDS 111
Query: 99 WADGPAYITQCPIKTGNSY---TYDFNVTGQRGTLWWHAHIFWL-RATVYGAIV 148
A+ ++ +TG + Y + + LW+H H L R VY +V
Sbjct: 112 DGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 165
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,691,190
Number of Sequences: 62578
Number of extensions: 717206
Number of successful extensions: 1676
Number of sequences better than 100.0: 91
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1374
Number of HSP's gapped (non-prelim): 204
length of query: 564
length of database: 14,973,337
effective HSP length: 104
effective length of query: 460
effective length of database: 8,465,225
effective search space: 3894003500
effective search space used: 3894003500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)