Query 008484
Match_columns 564
No_of_seqs 200 out of 1665
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 04:39:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008484.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008484hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 5.3E-98 2E-102 812.3 57.8 510 30-564 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 2.8E-94 9.7E-99 775.9 54.2 463 29-546 64-544 (580)
3 1v10_A Laccase; multicopper bl 100.0 8.1E-92 2.8E-96 757.3 46.2 477 27-564 18-508 (521)
4 3pxl_A Laccase; 4-copper prote 100.0 2.9E-91 1E-95 744.5 48.8 457 32-545 3-470 (499)
5 3t6v_A Laccase; beta barrel, o 100.0 2.3E-91 8E-96 745.4 46.3 455 32-545 4-470 (495)
6 1zpu_A Iron transport multicop 100.0 4.8E-91 1.6E-95 752.0 48.2 459 31-546 1-481 (534)
7 2q9o_A Laccase-1; multicopper 100.0 6.3E-89 2.1E-93 740.1 46.1 472 27-547 28-522 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 1.4E-88 4.7E-93 729.7 42.4 469 33-564 5-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 1.4E-81 4.7E-86 665.3 40.7 404 29-545 13-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 4E-81 1.4E-85 662.4 34.9 406 32-549 18-444 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 1.6E-78 5.5E-83 653.0 40.0 421 31-548 35-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 7.2E-78 2.5E-82 648.0 41.8 430 31-546 24-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 4.6E-77 1.6E-81 630.9 42.4 417 28-545 46-480 (481)
14 3aw5_A Multicopper oxidase; be 100.0 8E-77 2.7E-81 628.4 33.9 395 32-545 20-448 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 2.6E-75 8.9E-80 646.1 40.4 464 29-549 29-594 (612)
16 3od3_A Blue copper oxidase CUE 100.0 1E-74 3.6E-79 612.4 36.3 422 30-544 15-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 1.5E-72 5.1E-77 610.5 42.8 437 30-547 30-592 (612)
18 3g5w_A Multicopper oxidase typ 100.0 5.9E-53 2E-57 426.3 30.6 271 31-316 1-278 (318)
19 2j5w_A Ceruloplasmin, ferroxid 100.0 2.3E-52 7.9E-57 482.8 37.6 270 26-316 15-358 (1065)
20 2zwn_A Two-domain type laccase 100.0 1.8E-51 6.2E-56 420.0 32.8 271 31-316 2-279 (339)
21 2r7e_A Coagulation factor VIII 100.0 2.9E-53 9.8E-58 471.6 19.5 241 33-295 47-315 (742)
22 2dv6_A Nitrite reductase; elec 100.0 1.2E-48 3.9E-53 416.0 28.5 400 30-549 26-436 (447)
23 3gdc_A Multicopper oxidase; be 100.0 2E-47 6.7E-52 381.4 30.8 237 29-294 31-273 (288)
24 1kbv_A ANIA, major outer membr 100.0 9.2E-48 3.2E-52 390.7 28.0 266 29-316 35-309 (327)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 8.9E-46 3.1E-50 427.9 19.3 399 49-548 616-1060(1065)
26 3kw8_A Laccase, putative coppe 100.0 2.1E-44 7.1E-49 357.3 24.8 224 27-294 2-250 (276)
27 2zoo_A Probable nitrite reduct 100.0 8.2E-44 2.8E-48 377.7 28.6 268 28-317 24-300 (442)
28 3tas_A Small laccase, multi-co 100.0 4.9E-44 1.7E-48 360.8 23.7 225 26-294 7-256 (313)
29 3t9w_A Small laccase, multi-co 100.0 6.9E-44 2.4E-48 356.9 23.2 225 27-294 24-272 (299)
30 1mzy_A Copper-containing nitri 100.0 1E-43 3.6E-48 362.6 24.6 269 28-316 28-320 (333)
31 1oe1_A Dissimilatory copper-co 100.0 2E-42 6.8E-47 353.8 25.0 269 29-317 29-321 (336)
32 2bw4_A Copper-containing nitri 100.0 9.7E-42 3.3E-46 349.3 26.7 269 28-316 34-326 (340)
33 3cg8_A Laccase; oxidoreductase 100.0 3.2E-40 1.1E-44 336.4 25.7 236 29-314 45-306 (343)
34 1sdd_B Coagulation factor V; c 100.0 8.5E-40 2.9E-44 362.1 26.4 249 29-294 3-312 (647)
35 2dv6_A Nitrite reductase; elec 100.0 1E-38 3.5E-43 339.4 31.7 259 30-316 161-435 (447)
36 1sdd_A Coagulation factor V; c 100.0 5.1E-41 1.7E-45 337.9 10.2 213 52-294 50-285 (306)
37 2r7e_B Coagulation factor VIII 100.0 1.2E-39 4E-44 362.8 12.4 249 28-294 129-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 4.9E-37 1.7E-41 341.3 5.9 218 59-295 448-697 (742)
39 3gdc_A Multicopper oxidase; be 100.0 7.3E-30 2.5E-34 254.3 16.9 232 196-546 55-288 (288)
40 3cg8_A Laccase; oxidoreductase 100.0 8.8E-29 3E-33 252.0 17.5 216 215-549 76-309 (343)
41 3g5w_A Multicopper oxidase typ 100.0 3.7E-28 1.3E-32 245.0 15.8 242 196-547 23-277 (318)
42 2zwn_A Two-domain type laccase 100.0 1.3E-27 4.3E-32 243.8 19.7 239 196-546 24-277 (339)
43 3kw8_A Laccase, putative coppe 99.9 2.2E-27 7.4E-32 235.0 18.2 216 215-549 35-268 (276)
44 3t9w_A Small laccase, multi-co 99.9 2.4E-27 8.1E-32 237.0 17.1 216 215-549 57-290 (299)
45 3tas_A Small laccase, multi-co 99.9 1.7E-26 5.7E-31 232.7 20.3 216 215-549 41-274 (313)
46 1sdd_A Coagulation factor V; c 99.9 2.1E-24 7.3E-29 216.7 2.0 236 198-547 52-301 (306)
47 1kbv_A ANIA, major outer membr 99.9 1.3E-21 4.5E-26 198.3 18.1 237 196-549 59-310 (327)
48 1sdd_B Coagulation factor V; c 99.9 7.8E-22 2.7E-26 218.3 17.2 245 216-546 69-327 (647)
49 2bw4_A Copper-containing nitri 99.9 9.6E-21 3.3E-25 193.4 20.9 263 196-549 60-327 (340)
50 1mzy_A Copper-containing nitri 99.8 1.9E-19 6.5E-24 183.2 20.9 95 440-549 225-321 (333)
51 2r7e_B Coagulation factor VIII 99.8 2.1E-21 7E-26 216.2 3.8 244 216-545 199-455 (770)
52 2zoo_A Probable nitrite reduct 99.8 3.4E-19 1.2E-23 188.6 17.4 249 196-549 49-300 (442)
53 1oe1_A Dissimilatory copper-co 99.8 2.7E-18 9.3E-23 174.9 22.4 272 196-562 54-335 (336)
54 2uxt_A Protein SUFI, SUFI; oxi 99.8 2.7E-18 9.3E-23 181.3 22.9 236 32-294 152-426 (451)
55 2xu9_A Laccase; oxidoreductase 99.8 2.3E-18 8E-23 181.5 21.7 224 48-294 174-425 (439)
56 1hfu_A Laccase 1; oxidoreducta 99.7 3.1E-16 1.1E-20 167.9 24.7 258 34-294 143-455 (503)
57 1v10_A Laccase; multicopper bl 99.7 2.8E-16 9.5E-21 169.0 23.8 238 51-294 191-476 (521)
58 3zx1_A Oxidoreductase, putativ 99.7 5.6E-16 1.9E-20 163.8 21.3 243 33-294 181-466 (481)
59 3t6v_A Laccase; beta barrel, o 99.7 5.6E-15 1.9E-19 157.2 24.6 239 50-294 167-456 (495)
60 1zpu_A Iron transport multicop 99.7 7E-15 2.4E-19 158.3 24.7 224 51-294 167-466 (534)
61 3od3_A Blue copper oxidase CUE 99.7 4.9E-15 1.7E-19 156.6 20.9 251 33-294 151-475 (488)
62 1aoz_A Ascorbate oxidase; oxid 99.6 9.1E-15 3.1E-19 158.5 22.2 224 64-294 205-510 (552)
63 3pxl_A Laccase; 4-copper prote 99.6 5.3E-15 1.8E-19 157.4 19.4 238 50-293 165-455 (499)
64 2q9o_A Laccase-1; multicopper 99.6 4.4E-14 1.5E-18 153.0 25.1 241 51-294 195-506 (559)
65 2g23_A PHS, phenoxazinone synt 99.6 7.4E-15 2.5E-19 159.2 18.9 231 50-294 253-576 (612)
66 3aw5_A Multicopper oxidase; be 99.6 8.6E-15 3E-19 154.3 18.3 212 49-294 167-434 (448)
67 2wsd_A Spore coat protein A; o 99.6 5.5E-15 1.9E-19 158.7 13.1 218 50-294 229-495 (513)
68 3abg_A Bilirubin oxidase; clea 99.6 5.8E-14 2E-18 150.9 17.9 225 50-294 200-460 (534)
69 3cvb_A Plastocyanin; cupredoxi 99.5 3.5E-15 1.2E-19 125.0 4.5 89 59-151 15-105 (105)
70 3sqr_A Laccase; multicopper ox 99.5 3.1E-12 1.1E-16 137.8 21.9 239 51-293 225-528 (580)
71 3gyr_A PHS, phenoxazinone synt 99.4 6E-12 2E-16 138.7 21.5 232 50-294 253-576 (612)
72 1iby_A Nitrosocyanin; RED copp 99.4 1E-12 3.6E-17 111.1 10.4 105 33-151 2-112 (112)
73 2cal_A Rusticyanin; iron respi 99.4 2.2E-12 7.4E-17 115.1 10.9 99 47-150 46-154 (154)
74 1fwx_A Nitrous oxide reductase 99.2 2.3E-11 7.9E-16 129.9 11.0 96 47-153 497-594 (595)
75 2ov0_A Amicyanin; beta-sandwic 99.2 1.4E-10 4.6E-15 96.7 10.0 79 57-150 27-105 (105)
76 2aan_A Auracyanin A; cupredoxi 99.1 2.8E-10 9.7E-15 100.0 9.9 95 440-545 35-139 (139)
77 3cvb_A Plastocyanin; cupredoxi 99.1 2.7E-10 9.1E-15 94.9 8.2 85 440-545 19-104 (105)
78 2gim_A Plastocyanin; beta shee 99.0 8.7E-10 3E-14 92.0 8.8 83 63-151 20-106 (106)
79 2aan_A Auracyanin A; cupredoxi 98.9 4.8E-09 1.6E-13 92.0 10.9 91 59-150 31-139 (139)
80 2gim_A Plastocyanin; beta shee 98.8 1.6E-08 5.6E-13 84.1 8.5 85 440-545 20-105 (106)
81 4hci_A Cupredoxin 1; structura 98.8 2.2E-08 7.5E-13 82.4 8.7 79 57-150 22-100 (100)
82 1qhq_A Protein (auracyanin); e 98.7 7.5E-08 2.6E-12 84.4 10.6 92 59-151 29-140 (140)
83 2plt_A Plastocyanin; electron 98.7 2.9E-08 1E-12 81.3 6.9 80 63-150 18-98 (98)
84 1qhq_A Protein (auracyanin); e 98.6 9.5E-08 3.3E-12 83.8 9.4 98 441-545 34-139 (140)
85 3c75_A Amicyanin; copper prote 98.6 8E-08 2.7E-12 83.2 8.5 79 57-150 54-132 (132)
86 1pcs_A Plastocyanin; electron 98.6 8.6E-08 2.9E-12 78.5 7.9 80 63-150 19-98 (98)
87 1bxv_A Plastocyanin; copper pr 98.6 1.3E-07 4.4E-12 76.2 7.9 73 63-150 19-91 (91)
88 1b3i_A PETE protein, protein ( 98.5 2E-07 6.7E-12 76.2 8.0 77 63-150 19-97 (97)
89 1kdj_A Plastocyanin; electron 98.5 2.3E-07 7.8E-12 76.5 7.6 82 63-150 17-102 (102)
90 1byp_A Protein (plastocyanin); 98.5 4.4E-07 1.5E-11 74.3 9.2 77 63-150 17-99 (99)
91 3erx_A Pseudoazurin; copper pr 98.5 3.7E-07 1.3E-11 77.6 8.8 75 63-152 21-95 (123)
92 3tu6_A Pseudoazurin (blue copp 98.5 2.3E-07 7.7E-12 79.4 7.4 76 63-153 23-98 (127)
93 1plc_A Plastocyanin; electron 98.5 4.8E-07 1.7E-11 74.1 9.1 77 63-150 17-99 (99)
94 1pcs_A Plastocyanin; electron 98.5 4.4E-07 1.5E-11 74.2 8.8 79 440-545 19-98 (98)
95 2plt_A Plastocyanin; electron 98.5 4E-07 1.4E-11 74.4 8.2 81 440-545 18-98 (98)
96 3ef4_A Pseudoazurin, blue copp 98.5 4E-07 1.4E-11 77.3 7.9 75 63-152 22-96 (124)
97 1bxv_A Plastocyanin; copper pr 98.4 7.8E-07 2.7E-11 71.5 8.3 73 440-545 19-91 (91)
98 1b3i_A PETE protein, protein ( 98.4 8.7E-07 3E-11 72.2 7.5 79 440-545 19-97 (97)
99 1cuo_A Protein (azurin ISO-2); 98.3 1E-06 3.5E-11 75.5 7.6 93 59-151 14-129 (129)
100 1iby_A Nitrosocyanin; RED copp 98.3 2.2E-06 7.5E-11 71.9 9.2 75 440-546 38-112 (112)
101 1byp_A Protein (plastocyanin); 98.3 1.1E-06 3.9E-11 71.8 6.7 83 440-545 17-99 (99)
102 1id2_A Amicyanin; beta barrel, 98.3 4E-06 1.4E-10 69.5 9.9 79 57-150 28-106 (106)
103 3ay2_A Lipid modified azurin p 98.3 3.2E-06 1.1E-10 75.5 9.2 93 59-151 54-167 (167)
104 1iuz_A Plastocyanin; electron 98.2 2E-06 6.7E-11 70.3 7.1 77 63-150 18-98 (98)
105 4hci_A Cupredoxin 1; structura 98.2 4.3E-06 1.5E-10 68.5 8.7 72 441-545 29-100 (100)
106 1paz_A Pseudoazurin precursor; 98.2 5E-06 1.7E-10 70.7 8.4 75 63-152 21-95 (123)
107 1pmy_A Pseudoazurin; electron 98.1 4.6E-06 1.6E-10 70.9 7.7 76 63-153 21-96 (123)
108 2ccw_A Azurin II, AZN-2; elect 98.1 1E-05 3.6E-10 69.2 9.6 91 59-151 14-129 (129)
109 2iaa_C Azurin; quinoprotein, t 98.1 1.1E-05 3.9E-10 68.9 9.5 92 59-151 13-128 (128)
110 1kdj_A Plastocyanin; electron 98.1 5.1E-06 1.7E-10 68.3 7.1 85 440-545 17-102 (102)
111 1nwp_A Azurin; electron transp 98.1 1.3E-05 4.3E-10 68.5 9.6 91 59-150 14-128 (128)
112 2ux6_A Pseudoazurin; type-1 co 98.0 1.2E-05 4.1E-10 68.2 8.0 74 63-153 21-94 (122)
113 3sbq_A Nitrous-oxide reductase 98.0 2.1E-05 7E-10 82.5 11.2 96 46-152 539-638 (638)
114 1plc_A Plastocyanin; electron 98.0 1.3E-05 4.3E-10 65.5 6.9 83 440-545 17-99 (99)
115 2cal_A Rusticyanin; iron respi 97.9 8.6E-05 2.9E-09 65.7 11.0 85 440-545 61-154 (154)
116 1fwx_A Nitrous oxide reductase 97.8 5.7E-05 2E-09 80.8 10.9 78 439-546 512-592 (595)
117 2ov0_A Amicyanin; beta-sandwic 97.8 6.1E-05 2.1E-09 62.1 8.7 73 440-545 33-105 (105)
118 3fsa_A Azurin; copper, cupredo 97.6 0.00034 1.2E-08 58.8 9.3 89 59-150 14-125 (125)
119 3tu6_A Pseudoazurin (blue copp 97.2 0.00078 2.7E-08 57.3 7.0 76 440-548 23-98 (127)
120 3ef4_A Pseudoazurin, blue copp 97.2 0.0011 3.6E-08 56.1 7.7 75 441-548 23-97 (124)
121 3erx_A Pseudoazurin; copper pr 97.0 0.0023 7.8E-08 54.1 8.4 73 441-546 22-94 (123)
122 1iuz_A Plastocyanin; electron 97.0 0.003 1E-07 51.0 8.4 81 440-545 18-98 (98)
123 1id2_A Amicyanin; beta barrel, 96.9 0.0034 1.1E-07 51.6 8.7 73 440-545 34-106 (106)
124 3c75_A Amicyanin; copper prote 96.8 0.0044 1.5E-07 53.1 8.7 73 440-545 60-132 (132)
125 2cua_A Protein (CUA); CUA cent 96.7 0.0089 3.1E-07 51.3 9.7 74 63-151 60-135 (135)
126 3s8f_B Cytochrome C oxidase su 96.4 0.026 9E-07 50.1 10.9 74 63-151 93-168 (168)
127 1paz_A Pseudoazurin precursor; 96.2 0.018 6E-07 48.6 8.3 37 507-547 59-95 (123)
128 1pmy_A Pseudoazurin; electron 96.1 0.017 5.9E-07 48.6 7.6 38 506-547 58-95 (123)
129 3sbq_A Nitrous-oxide reductase 95.8 0.04 1.4E-06 58.0 10.6 79 440-546 558-637 (638)
130 1cuo_A Protein (azurin ISO-2); 95.5 0.094 3.2E-06 44.4 10.0 96 440-545 18-128 (129)
131 3ay2_A Lipid modified azurin p 95.5 0.064 2.2E-06 47.5 9.2 45 500-545 120-166 (167)
132 2ux6_A Pseudoazurin; type-1 co 95.3 0.052 1.8E-06 45.6 7.9 73 440-547 21-93 (122)
133 2cua_A Protein (CUA); CUA cent 95.2 0.096 3.3E-06 44.8 9.2 70 442-545 62-134 (135)
134 2ccw_A Azurin II, AZN-2; elect 94.1 0.32 1.1E-05 41.1 9.7 43 502-545 83-128 (129)
135 2iaa_C Azurin; quinoprotein, t 93.7 0.45 1.5E-05 40.1 9.9 44 501-545 81-127 (128)
136 1nwp_A Azurin; electron transp 93.3 0.56 1.9E-05 39.5 9.8 44 501-545 82-128 (128)
137 3s8f_B Cytochrome C oxidase su 92.4 0.69 2.4E-05 40.9 9.5 73 442-546 95-168 (168)
138 3fsa_A Azurin; copper, cupredo 91.4 0.88 3E-05 38.0 8.4 96 441-545 19-125 (125)
139 3isy_A Bsupi, intracellular pr 87.0 4.7 0.00016 33.2 9.7 71 222-293 16-101 (120)
140 1cyx_A CYOA; electron transpor 78.4 13 0.00044 33.7 9.8 62 216-296 41-102 (205)
141 3isy_A Bsupi, intracellular pr 71.0 34 0.0012 28.1 9.7 74 52-136 23-101 (120)
142 2gsm_B Cytochrome C oxidase su 66.2 20 0.00069 33.9 8.5 62 216-296 171-232 (262)
143 3hb3_B Cytochrome C oxidase su 64.5 26 0.00089 33.7 9.0 63 215-296 188-250 (298)
144 1cyx_A CYOA; electron transpor 55.9 17 0.00059 32.9 5.7 73 63-150 41-115 (205)
145 1v54_B Cytochrome C oxidase po 50.8 39 0.0013 31.1 7.4 63 215-296 139-201 (227)
146 1ws8_A Mavicyanin; oxidized fo 48.1 9.6 0.00033 30.8 2.4 69 66-154 29-107 (109)
147 2gsm_B Cytochrome C oxidase su 45.7 59 0.002 30.6 7.9 75 63-152 171-247 (262)
148 2r39_A FIXG-related protein; s 45.6 57 0.0019 26.4 6.9 47 225-281 34-82 (118)
149 1fft_B Ubiquinol oxidase; elec 43.9 39 0.0013 32.8 6.5 62 216-296 151-212 (315)
150 3hb3_B Cytochrome C oxidase su 42.0 81 0.0028 30.3 8.3 76 440-547 189-265 (298)
151 2p9r_A Alpha-2-M, alpha-2-macr 41.9 65 0.0022 25.1 6.6 68 219-292 12-83 (102)
152 3q48_A Chaperone CUPB2; IG fol 41.3 34 0.0012 32.2 5.5 46 33-80 44-102 (257)
153 1yew_A Particulate methane mon 38.0 67 0.0023 31.5 6.9 16 108-123 319-334 (382)
154 2xzz_A Protein-glutamine gamma 35.7 38 0.0013 26.8 4.1 51 72-130 23-79 (102)
155 1jer_A Cucumber stellacyanin; 35.0 43 0.0015 28.2 4.5 74 66-158 31-115 (138)
156 1v54_B Cytochrome C oxidase po 34.7 71 0.0024 29.4 6.4 75 63-152 140-216 (227)
157 4ac7_B Urease subunit beta; hy 32.7 90 0.0031 25.5 5.8 59 64-122 18-88 (126)
158 4ubp_B Protein (urease (chain 32.7 90 0.0031 25.5 5.8 59 64-122 18-88 (126)
159 1nep_A EPV20, BNPC2, epididyma 31.5 65 0.0022 26.6 5.1 69 54-123 18-94 (130)
160 1x9u_A Umecyanin; cupredoxin, 27.8 51 0.0018 26.8 3.7 39 119-158 72-112 (116)
161 1xwv_A DER F II; beta sheets, 27.5 90 0.0031 25.7 5.3 69 54-123 16-92 (129)
162 2h7w_A Chagasin; beta-strands, 27.4 2.5E+02 0.0086 23.1 8.0 21 61-81 31-51 (131)
163 2wtp_A ORF131 protein, CZCE; m 25.8 30 0.001 28.7 1.9 19 217-235 72-90 (131)
164 3idu_A Uncharacterized protein 25.4 2.8E+02 0.0095 22.7 9.7 66 219-293 28-96 (127)
165 3rfr_A PMOB; membrane, oxidore 25.2 1.3E+02 0.0045 29.8 6.6 17 107-123 350-366 (419)
166 2c34_A ICP, inhibitor of cyste 24.7 2.7E+02 0.0092 22.3 7.9 68 62-130 14-89 (116)
167 3kmh_A D-lyxose isomerase; cup 22.5 1.7E+02 0.0057 27.0 6.3 14 263-276 171-184 (246)
168 2cio_B Inhibitor of cysteine p 21.8 3.2E+02 0.011 22.1 7.5 21 62-82 12-32 (121)
169 2wtp_A ORF131 protein, CZCE; m 21.4 35 0.0012 28.3 1.5 17 64-80 72-88 (131)
170 2hj1_A Hypothetical protein; s 20.6 37 0.0013 26.7 1.4 24 52-75 59-82 (97)
171 2wgn_B Inhibitor of cysteine p 20.5 3.6E+02 0.012 22.2 7.7 73 217-292 36-110 (132)
172 2x3c_A Toxic extracellular end 20.5 3E+02 0.01 26.8 8.4 68 224-293 38-127 (343)
173 3rpf_C Molybdopterin convertin 20.1 44 0.0015 24.4 1.7 24 52-75 43-67 (74)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=5.3e-98 Score=812.28 Aligned_cols=510 Identities=31% Similarity=0.556 Sum_probs=409.5
Q ss_pred CceEEEEEEEEEEEeecCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCC-CCceeeeCCCCCCCCCCCCCCCCccc
Q 008484 30 AAIKKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ-YNMSIHWHGLKQYRNGWADGPAYITQ 108 (564)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~~~ 108 (564)
+++|+|+|+|++..+++||..+.+|+|||++|||+|+|++||+|+|+|+|+|+ ++++|||||+++.+.+|+||+++++|
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 36899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEeCCCCcceeEecchhhhh-cceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHHHHHhhhc
Q 008484 109 CPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR-ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEEVEKQGQK 187 (564)
Q Consensus 109 ~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 187 (564)
|+|+||++++|+|++ +++||||||||...|. +||+|+|||++++....++ .+|+|++|+++||++.+....+.....
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999999 8999999999999888 8999999999987554444 347899999999999987766544332
Q ss_pred cC-CCCCCCceEEEcCcCCCCCCC-------------CCC-----CeeeEEEecCcEEEEEEEecCCCCeEEEEEcCcee
Q 008484 188 MG-LPPNMSDAHTINGKPGPLFPC-------------SEK-----HTFAMEVESGKTYLLRIINAALNDELFFAIAGHNF 248 (564)
Q Consensus 188 ~g-~~~~~~~~~~iNG~~~~~~~~-------------~~~-----~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~ 248 (564)
.. .....++.++|||+.. ++| +.. ..+.+++++|++|||||||++..+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 1112468999999985 333 321 12379999999999999999999999999999999
Q ss_pred EEEeeCCCcccceEecEEEECCCceEEEEEEe-CCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCCC--CCCCCCC
Q 008484 249 TVVEVDAVYTKPFTTEAILIAPGQTTNVLVQA-NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNS--LLPTLAQ 325 (564)
Q Consensus 249 ~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~-~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~--~~~~~p~ 325 (564)
+||++||++++|+.++++.|++||||||+|++ ++.+|+|+|+++..... .++....|+|+|.+.... +....|.
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~---~~~~~~~ail~y~~~~~~~~p~~~~p~ 313 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARH---PNTPPGLTLLNYLPNSVSKLPTSPPPQ 313 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSC---CCSCCEEEEEEETTSCTTSCCSSCCCC
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCC---CCCccEEEEEEECCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999 55579999999875421 234568899999876531 1222344
Q ss_pred CCCCCChhhhhhhhhhcccCCCCCCCCCCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhcc
Q 008484 326 LPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFN 405 (564)
Q Consensus 326 ~p~~~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~ 405 (564)
.|.+++......+ .++.+..+. +...|..+++++.+....+.. + ..+.|++|+++|..|+.++|.+.+.+
T Consensus 314 ~p~~~~~~~~~~~--~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~------~-~~~~w~iNg~s~~~p~~P~L~~~~~~ 383 (552)
T 1aoz_A 314 TPAWDDFDRSKNF--TYRITAAMG-SPKPPVKFNRRIFLLNTQNVI------N-GYVKWAINDVSLALPPTPYLGAMKYN 383 (552)
T ss_dssp CCCTTCHHHHHHH--HTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE------T-TEEEEEETTEEECCCSSCHHHHHHTT
T ss_pred CCccccccccccc--cccccccCC-CCCCCCCCcEEEEEEEeeccC------C-CeEEEEECCCccCCCCCCHHHHHhhc
Confidence 4555554433222 233333222 334556678888777654321 2 25679999999999988999887777
Q ss_pred ccccccCCCCCCCC-CCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCC---CCCCCeeecCCceEEEeecC
Q 008484 406 LKGVFKADFPDKPP-KPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLT---VESHPFHLHGYNFFVVGTGI 481 (564)
Q Consensus 406 ~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~---~~~HP~HlHG~~F~Vv~~g~ 481 (564)
++|.+..+++..+. ..|+... .+.+...+.++.++.++.|++|||+|+|.+... ...||||||||+||||++|.
T Consensus 384 ~~g~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~ 461 (552)
T 1aoz_A 384 LLHAFDQNPPPEVFPEDYDIDT--PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 461 (552)
T ss_dssp CTTSSCCSCCCSCCCTTCCTTS--CCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEE
T ss_pred CccccccCCCcccccccccccc--ccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEeccc
Confidence 77777766654332 1122221 111223345678899999999999999976332 56799999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEecCCCCCCCCCCCCCCC
Q 008484 482 GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDL 561 (564)
Q Consensus 482 g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p~~~ 561 (564)
|.|++ .....+|+.+|.|||||.|+++||++|||+|||||.|+|||||+||++.|||++|.|.+ .+++.+|.++
T Consensus 462 G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~-----~~~~~~P~~~ 535 (552)
T 1aoz_A 462 GKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV-----EKVGRIPTKA 535 (552)
T ss_dssp SSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG-----GGCCCCCHHH
T ss_pred CccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCc-----hhhccCCcch
Confidence 99887 44567899999999999999999999999999999999999999999999999998754 2566789999
Q ss_pred CCC
Q 008484 562 PPC 564 (564)
Q Consensus 562 ~~c 564 (564)
++|
T Consensus 536 ~~C 538 (552)
T 1aoz_A 536 LAC 538 (552)
T ss_dssp HSS
T ss_pred hhh
Confidence 999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=2.8e-94 Score=775.91 Aligned_cols=463 Identities=29% Similarity=0.488 Sum_probs=373.8
Q ss_pred cCceEEEEEEEEEEEeecCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCC-CCceeeeCCCCCCCCCCCCCCCCcc
Q 008484 29 EAAIKKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ-YNMSIHWHGLKQYRNGWADGPAYIT 107 (564)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~~ 107 (564)
.+++++|+|++++..+++||..+.+|+|||++|||+|++++||+|+|+|+|+++ ++++|||||+++.+++|+||++++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 678999999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred ccccCCCCeEEEEEEeCCCCcceeEecchhhhh-cceeeeEEEeCCCCCCCCCCCCCCcE-EEEeecccccCHHHHHHhh
Q 008484 108 QCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR-ATVYGAIVIMPKPGSPFPFPQPNREE-VILLGEWWHTDVEEVEKQG 185 (564)
Q Consensus 108 ~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 185 (564)
||+|+||++|+|+|++ .++||||||||...|+ +||+|+|||+++... .+|.|. +|+++||++.+..++....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999999 7899999999999888 799999999987643 247887 9999999999888776665
Q ss_pred hccCCCCCCCceEEEcCcCCCCCCCCC---------CCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCC
Q 008484 186 QKMGLPPNMSDAHTINGKPGPLFPCSE---------KHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAV 256 (564)
Q Consensus 186 ~~~g~~~~~~~~~~iNG~~~~~~~~~~---------~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~ 256 (564)
... .+..+++++|||+.. +.|+. ...+.+++++|++|||||||++....+.|+|+||+|+|||+||.
T Consensus 218 ~~~--~~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLG--APPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTS--CCCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hcc--CCCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 443 245779999999964 55543 24579999999999999999999999999999999999999999
Q ss_pred cccceEecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhh
Q 008484 257 YTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFAL 336 (564)
Q Consensus 257 ~~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 336 (564)
+++|+.++++.|++||||||+|++++++|+|+|++.+..++.....+....|||+|.+.....+ ..+.+.......
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P----~~~~~~~~~~~~ 369 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANP----TSVGTTPRGTCE 369 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCC----CCCCCCCCCCSC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCC----CCCCCCccchhh
Confidence 9999999999999999999999999988999999987655532233446899999987543221 122221111000
Q ss_pred hh-hhhcccCCCCCCCCCCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeec-CcchhhhhhhccccccccCCC
Q 008484 337 NY-NKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVM-PQTALLQAHYFNLKGVFKADF 414 (564)
Q Consensus 337 ~~-~~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~-p~~~~l~~~~~~~~g~~~~~~ 414 (564)
+. ...|.++ .+...|...+.++.+.+. .+..+.|++||.+|.. ++.|.|...+. |. .+|
T Consensus 370 ~~~~~~L~P~----~~~~~~~~~~~~~~l~~~----------~~~~~~w~iN~~s~~~~~~~P~L~~~~~---g~--~~~ 430 (580)
T 3sqr_A 370 DEPVASLVPH----LALDVGGYSLVDEQVSSA----------FTNYFTWTINSSSLLLDWSSPTTLKIFN---NE--TIF 430 (580)
T ss_dssp CSCGGGCCBS----SCCBCCSEEEEEEEEEEE----------ESSSEEEEETTBCCCCCTTSCHHHHHHT---TC--CCC
T ss_pred cccccccccC----CCCCCCCccceEEEEEec----------cCCceeEEECCEecccCCCCCchhhhhc---CC--ccC
Confidence 00 0122222 222334334444444332 2246789999999975 46676665332 21 122
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCceeeEEe----ecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCC
Q 008484 415 PDKPPKPFNYTGAPLTASLGTSRATRLSKI----AFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYP 490 (564)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~ 490 (564)
+. ...++.+ +.|++|||+|+|.+.. ...||||||||+||||++|.|.|++++.+
T Consensus 431 ~~---------------------~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~HLHGh~F~vv~~g~G~f~~~~~~ 488 (580)
T 3sqr_A 431 PT---------------------EYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIHLHGHDFFIVAQETDVFNSDESP 488 (580)
T ss_dssp CG---------------------GGCEEEECC----CCEEEEEEEECSSS-CCCEEEEESSCCEEEEEEESSCCCTTTSG
T ss_pred CC---------------------CcceeecccccCCCcEEEEEEeCCCcc-ccceeeEecCceEEEEecCCCccCccccc
Confidence 11 1233344 4699999999997522 57999999999999999999999987777
Q ss_pred CCCCCCCCCcceeeEecCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEec
Q 008484 491 ANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVED 546 (564)
Q Consensus 491 ~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~ 546 (564)
..+|+.+|++|||+.|+++||++|||++||||.|+|||||+||++.||+++|.+.+
T Consensus 489 ~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~ 544 (580)
T 3sqr_A 489 AKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQ 544 (580)
T ss_dssp GGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESG
T ss_pred cccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECH
Confidence 78999999999999999999999999999999999999999999999999998754
No 3
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=8.1e-92 Score=757.26 Aligned_cols=477 Identities=31% Similarity=0.472 Sum_probs=364.0
Q ss_pred cccCceEEEEEEEEEEEeecCCc-eeeEEEECCcCCCCeEEeecCCEEEEEEEeCCC-----CCceeeeCCCCCCCCCCC
Q 008484 27 PAEAAIKKYQFDVQVKNVSRLCH-AKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ-----YNMSIHWHGLKQYRNGWA 100 (564)
Q Consensus 27 ~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-----~~~~iH~HG~~~~~~~~~ 100 (564)
...+.+.+|+|++++..+++||. .+.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+.+|+
T Consensus 18 ~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~ 97 (521)
T 1v10_A 18 LSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEM 97 (521)
T ss_dssp ----CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGG
T ss_pred hhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCcc
Confidence 34567788999999999999999 999999999999999999999999999999999 999999999999988999
Q ss_pred CCCCCccccccCCCCeEEEEEEeCCCCcceeEecchhhhh-cceeeeEEEeCCCCC-CCCCCCCCCcEEEEeecccccCH
Q 008484 101 DGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR-ATVYGAIVIMPKPGS-PFPFPQPNREEVILLGEWWHTDV 178 (564)
Q Consensus 101 DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~iiV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~ 178 (564)
||+++++||+|+||++++|+|++++++||||||||.+.|. +||+|+|||+++.+. ..+++..++|++|+++||++...
T Consensus 98 DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~ 177 (521)
T 1v10_A 98 DGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLS 177 (521)
T ss_dssp SCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCC
T ss_pred CCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCH
Confidence 9999999999999999999999768899999999999988 899999999987532 22232234699999999999876
Q ss_pred HHHHHhhhccCCCCCCCceEEEcCcCCCCCCCC--CCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCC
Q 008484 179 EEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCS--EKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAV 256 (564)
Q Consensus 179 ~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~--~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~ 256 (564)
.++... .+.....+++++|||+.. +.|+ ....+.+++++|++|||||+|+++.+.+.|+|+||+|+||++||+
T Consensus 178 ~~~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~ 252 (521)
T 1v10_A 178 TVLFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGV 252 (521)
T ss_dssp C----------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred HHHhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCc
Confidence 654321 112234679999999975 4564 234479999999999999999999999999999999999999999
Q ss_pred cccceEecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhh
Q 008484 257 YTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFAL 336 (564)
Q Consensus 257 ~~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 336 (564)
+++|+.++++.|+|||||||+|++++.+|+|+|++.....+. .+.+....++|+|.+.....+...+. ......
T Consensus 253 ~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~~~p~~~~~--~~~~~~--- 326 (521)
T 1v10_A 253 SHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGAAVAEPTTSQN--SGTALN--- 326 (521)
T ss_dssp EEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTCCSCCCCCCCC--CSCBCC---
T ss_pred cccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc-cCCCCceeEEEEECCCCCCCCCCCCC--cccccc---
Confidence 999999999999999999999999987799999998754321 12222346999998764321111100 000000
Q ss_pred hhhhhcccCCCCCCCC-CCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhcccccccc-CCC
Q 008484 337 NYNKKLRSLNSPKFPA-DVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFK-ADF 414 (564)
Q Consensus 337 ~~~~~~~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~-~~~ 414 (564)
..++.++.....|. ..+...+.++.+...+ ++..+.|++||++|..+..++|.+.+. +... .+
T Consensus 327 --~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~---------~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~~~- 391 (521)
T 1v10_A 327 --EANLIPLINPGAPGNPVPGGADINLNLRIGR---------NATTADFTINGAPFIPPTVPVLLQILS---GVTNPND- 391 (521)
T ss_dssp --GGGCCBSSCCCCSSCSSTTCSSEEEECCEEC---------CSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCGGG-
T ss_pred --hhhcccCCcccCCCcccCCcceEEEEEEEec---------CCceeEEEECCCcccCCCCchhhhhhc---CCccccc-
Confidence 01233332222221 1222345555433222 223346899999999887776655321 1110 01
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCC
Q 008484 415 PDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYN 494 (564)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~ 494 (564)
...+..++.++.|++|||+++| .+.||||||||+||||+++.+. .++
T Consensus 392 --------------------~~~~~~~~~v~~g~~vei~l~N-----~~~HP~HLHGh~F~Vl~~~~~~--------~~n 438 (521)
T 1v10_A 392 --------------------LLPGGAVISLPANQVIEISIPG-----GGNHPFHLHGHNFDVVRTPGSS--------VYN 438 (521)
T ss_dssp --------------------SSSTTTEEEECTTCEEEEEEEC-----CBSCEEEESSCCEEEEECTTCS--------CCC
T ss_pred --------------------CCCCceEEEecCCCEEEEEEcC-----CCCCCEEEccceEEEEecCCCC--------ccc
Confidence 1123577889999999999998 4699999999999999997442 467
Q ss_pred CCCCCcceeeEe-cCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEecCCCCCCCCCCCC-CCCCCC
Q 008484 495 LVDPIERNTAAV-PTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPP-TDLPPC 564 (564)
Q Consensus 495 ~~~p~~rDTv~v-p~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~~~c 564 (564)
+.+|.|||||.| ++++|++|||++||||.|+|||||++|++.|||++|.|.+... .++.++| .+.+.|
T Consensus 439 ~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C 508 (521)
T 1v10_A 439 YVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNI--PIANAISPAWDDLC 508 (521)
T ss_dssp CSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGH--HHHSCCCHHHHTHH
T ss_pred cCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcch--hhccCCChHHhhhc
Confidence 889999999999 8999999999999999999999999999999999998865433 2333334 456666
No 4
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.9e-91 Score=744.50 Aligned_cols=457 Identities=32% Similarity=0.519 Sum_probs=358.4
Q ss_pred eEEEEEEEEEEEeecCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCC-----CceeeeCCCCCCCCCCCCCCCCc
Q 008484 32 IKKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQY-----NMSIHWHGLKQYRNGWADGPAYI 106 (564)
Q Consensus 32 ~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~ 106 (564)
...|+|+|++..+++||..+.+|+|||++|||+|++++||+|+|+|+|+|++ +|+|||||+++..++|+||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 4679999999999999999999999999999999999999999999999985 79999999999999999999999
Q ss_pred cccccCCCCeEEEEEEeCCCCcceeEecchhhhh-cceeeeEEEeCCCCC-CCCCCCCCCcEEEEeecccccCHHHHHHh
Q 008484 107 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR-ATVYGAIVIMPKPGS-PFPFPQPNREEVILLGEWWHTDVEEVEKQ 184 (564)
Q Consensus 107 ~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~iiV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 184 (564)
|||+|+||++|+|+|++++++||||||||...|. +||+|+|||+++.+. ...++..++|++|+++||++.....
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 9999999999999999977899999999999888 899999999987542 1123223457899999999876432
Q ss_pred hhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEec
Q 008484 185 GQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTE 264 (564)
Q Consensus 185 ~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 264 (564)
.+..+..+++++|||+.. ++.|.....+.+++++|++|||||||+++...+.|+|+||+|+|||+||.+++|+.++
T Consensus 159 ---~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 234 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234 (499)
T ss_dssp ---SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEee
Confidence 223445789999999953 3333334568999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhccc
Q 008484 265 AILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRS 344 (564)
Q Consensus 265 ~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~ 344 (564)
++.|++||||||+|++++++|+|+|++.+...+. .+.+....|+|+|.+.....+.. +...... .....+|.+
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~p~~----~~~~~~~--~~~~~~L~p 307 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV-GFDGGINSAILRYDGAPAVEPTT----NQTTSVK--PLNEVDLHP 307 (499)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSCCCC----CCCCCSS--BCCGGGCCB
T ss_pred eEEECCCcEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEeCCCCCCCCCC----CCCCCCc--ccccccccc
Confidence 9999999999999999997799999998654332 22333457999998754322111 1111100 000123444
Q ss_pred CCCCCCCC-CCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCC
Q 008484 345 LNSPKFPA-DVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFN 423 (564)
Q Consensus 345 l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~ 423 (564)
+.....|. ..+..+|+++.+.+.+. +. .|++||++|..|+.++|...+. |.....
T Consensus 308 ~~~~~~p~~~~~~~~d~~~~l~~~~~---------~~--~w~iNg~s~~~~~~P~L~~~~~---g~~~~~---------- 363 (499)
T 3pxl_A 308 LVSTPVPGAPSSGGVDKAINMAFNFN---------GS--NFFINGASFVPPTVPVLLQILS---GAQTAQ---------- 363 (499)
T ss_dssp SSCCCCSSCSSTTCSSEEEECCEEEC---------SS--CEEETTBCCCCCSSCHHHHHHT---TCCSTT----------
T ss_pred cccccCCCcccCCCCcEEEEEEEEec---------Cc--EEEEcCEecCCCCCchhhhhhc---CCcccc----------
Confidence 43332222 23345677776554432 22 4899999999888877665321 211100
Q ss_pred CCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCccee
Q 008484 424 YTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNT 503 (564)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDT 503 (564)
.......++.++.|++|||+|+|.+......||||||||+|+||+.+. ...+|+.+|.+|||
T Consensus 364 ----------~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g--------~~~~n~~~P~~rDt 425 (499)
T 3pxl_A 364 ----------DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG--------STVYNYDNPIFRDV 425 (499)
T ss_dssp ----------TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT--------CCCCCSSSCCEESE
T ss_pred ----------ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC--------CcccccCCCCccce
Confidence 001124678999999999999953223467999999999999998641 23578899999999
Q ss_pred eEecC---CCEEEEEEEecCceeeEEEeechhchhcccEEEEEEe
Q 008484 504 AAVPT---GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 504 v~vp~---~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
+.|++ ++|++|||++||||.|+|||||+||++.||+++|.+.
T Consensus 426 v~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~ 470 (499)
T 3pxl_A 426 VSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAED 470 (499)
T ss_dssp EECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEES
T ss_pred EEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEC
Confidence 99997 9999999999999999999999999999999999644
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=2.3e-91 Score=745.36 Aligned_cols=455 Identities=30% Similarity=0.507 Sum_probs=356.5
Q ss_pred eEEEEEEEEEEEeecCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCC-----CceeeeCCCCCCCCCCCCCCCCc
Q 008484 32 IKKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQY-----NMSIHWHGLKQYRNGWADGPAYI 106 (564)
Q Consensus 32 ~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~ 106 (564)
...|+|+|++..+++||..+.+|+|||++|||+|++++||+|+|+|+|+|++ +|+|||||+++.+++|+||++++
T Consensus 4 ~~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 83 (495)
T 3t6v_A 4 GPVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFI 83 (495)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred CCeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3679999999999999999999999999999999999999999999999985 79999999999999999999999
Q ss_pred cccccCCCCeEEEEEEeCCCCcceeEecchhhhh-cceeeeEEEeCCCCCC-CCCCCCCCcEEEEeecccccCHHHHHHh
Q 008484 107 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR-ATVYGAIVIMPKPGSP-FPFPQPNREEVILLGEWWHTDVEEVEKQ 184 (564)
Q Consensus 107 ~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~iiV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 184 (564)
|||+|+||++|+|+|++++++||||||||...|. +||+|+|||+++.+.. .+++..++|++|+++||++......
T Consensus 84 tq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~--- 160 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM--- 160 (495)
T ss_dssp TBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS---
T ss_pred ccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh---
Confidence 9999999999999999977899999999999888 8999999999876421 1232235678999999999865421
Q ss_pred hhccCCCCCCCceEEEcCcCCCCCCCC--CCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceE
Q 008484 185 GQKMGLPPNMSDAHTINGKPGPLFPCS--EKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFT 262 (564)
Q Consensus 185 ~~~~g~~~~~~~~~~iNG~~~~~~~~~--~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~ 262 (564)
.+..+..+++++|||+.. +.|. ....+.+++++|++|||||||+++.+.+.|+|+||+|+|||+||.+++|+.
T Consensus 161 ---~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 ---GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp ---CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred ---ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 223445789999999953 2332 235578999999999999999999999999999999999999999999999
Q ss_pred ecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhc
Q 008484 263 TEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKL 342 (564)
Q Consensus 263 ~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~ 342 (564)
++++.|+|||||||+|++++++|+|+|++.+...+. .+.+....|+|+|.+.....+...+ +..... .....+|
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~p~~~~--~~~~~~---~~~~~~L 309 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE-GFDGGINSAILRYDGATTADPVTVA--STVHTK---CLIETDL 309 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSCCCCCC--CSSCSS---BCCGGGC
T ss_pred eeeEEEcCceEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEECCCCCCCCCCCC--CCCCcc---ccccccc
Confidence 999999999999999999997799999998654332 2223345799999875432211110 000000 0001234
Q ss_pred ccCCCCCCCC-CCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCC
Q 008484 343 RSLNSPKFPA-DVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKP 421 (564)
Q Consensus 343 ~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~ 421 (564)
.++.....|. ..+..+|+++.+.+.+ ++. .|++||++|..++.++|...+ +|.....
T Consensus 310 ~p~~~~~~p~~~~~~~~d~~~~l~~~~---------~~~--~w~iNg~s~~~~~~P~L~~~~---~g~~~~~-------- 367 (495)
T 3t6v_A 310 HPLSRNGVPGNPHQGGADCNLNLSLGF---------ACG--NFVINGVSFTPPTVPVLLQIC---SGANTAA-------- 367 (495)
T ss_dssp CBSSCCCCSSCSSTTCSSEEEECCEEE---------ETT--EEEETTBCCCCCSSCHHHHHH---TTCCSST--------
T ss_pred cccccccCCCccCCCCCcEEEEEEEEe---------cCc--EEEEcCEecCCCCCcchhhhh---cCCcCcc--------
Confidence 4443322221 1334567776655433 222 589999999988887665432 1211100
Q ss_pred CCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEE-eCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCc
Q 008484 422 FNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQ-DTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIE 500 (564)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~-n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~ 500 (564)
.......++.++.|++|||+|+ |. ....||||||||+|+||+.+. ...+|+.+|.+
T Consensus 368 ------------~~~~~~~v~~~~~g~~V~ivl~~n~---~~~~HP~HLHGh~F~vl~~~g--------~~~~n~~~P~~ 424 (495)
T 3t6v_A 368 ------------DLLPSGSVISLPSNSTIEIALPAGA---AGGPHPFHLHGHDFAVSESAS--------NSTSNYDDPIW 424 (495)
T ss_dssp ------------TSSSTTSEEEECTTCEEEEEEECCS---SSCCCEEEETTCCEEEEECTT--------CCCCCSSSCCE
T ss_pred ------------cccCCcceEEecCCCEEEEEEccCC---CCCCcceeecCCcEEEEecCC--------CCCcccCCCCC
Confidence 0011246789999999999998 43 368999999999999998642 23578899999
Q ss_pred ceeeEecC-CCEEEEEEEecCceeeEEEeechhchhcccEEEEEEe
Q 008484 501 RNTAAVPT-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 501 rDTv~vp~-~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
|||+.|++ |+|++|||++||||.|+|||||++|++.||+++|.+.
T Consensus 425 rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~ 470 (495)
T 3t6v_A 425 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAED 470 (495)
T ss_dssp ESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEET
T ss_pred ccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEC
Confidence 99999997 8999999999999999999999999999999999654
No 6
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-91 Score=751.96 Aligned_cols=459 Identities=27% Similarity=0.426 Sum_probs=363.5
Q ss_pred ceEEEEEEEEEEEeecCC-ceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCC-CCceeeeCCCCCCCCCCCCCCCCccc
Q 008484 31 AIKKYQFDVQVKNVSRLC-HAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ-YNMSIHWHGLKQYRNGWADGPAYITQ 108 (564)
Q Consensus 31 ~~~~~~l~~~~~~~~~~g-~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~~~ 108 (564)
++++|+|+|++..+++|| ..+.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+.+|+||+++++|
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 7999999999999999999999999999999998 99999999999999899999999999
Q ss_pred cccCCCCeEEEEEEeCCCCcceeEecchhhhh-cceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHHHHHhhhc
Q 008484 109 CPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR-ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEEVEKQGQK 187 (564)
Q Consensus 109 ~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 187 (564)
|+|+||++++|+|++++++||||||||.+.|. +||+|+|||+++.. ++ .+|+|++|+++||++.+..++...+..
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999955999999999999988 89999999999863 22 458899999999999988877655432
Q ss_pred c---CCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEec
Q 008484 188 M---GLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTE 264 (564)
Q Consensus 188 ~---g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 264 (564)
. ......++.++|||+.. +.+++++||+|||||||+++.+.+.|+|+||+|+||++||++++|..++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 12345679999999975 7899999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEEeCCCC-ceeEEEEeecCCCC---CCCCCCceEEEEEEccCCCCCCC-CCCCCCC-CCChhhhhhh
Q 008484 265 AILIAPGQTTNVLVQANQKP-GRYFMAARPFNDAP---IPVDNKTATGILQYKGIPNSLLP-TLAQLPA-SNDSEFALNY 338 (564)
Q Consensus 265 ~v~l~pg~r~dv~v~~~~~p-g~y~l~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~-~~p~~p~-~~~~~~~~~~ 338 (564)
++.|++||||||+|++++.+ |+|+|++.....+. ....+....++|+|.+....+.+ .....+. .++
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~------- 299 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDD------- 299 (534)
T ss_dssp CEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCG-------
T ss_pred eEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCccccccccccc-------
Confidence 99999999999999998743 78999987643211 11224557899999875432111 0111111 111
Q ss_pred hhhcccCCCCCCCCCCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCC
Q 008484 339 NKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKP 418 (564)
Q Consensus 339 ~~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~ 418 (564)
..++++.. ..++..+++++.+.+.+.... ++. ..|.+|+++|..|+.++|...+.. +.+. ..+
T Consensus 300 -~~l~p~~~----~~~~~~~~~~~~l~~~~~~~~-----~~~-~~~~iNg~s~~~~~~P~L~~~~~~--~~~~----~~~ 362 (534)
T 1zpu_A 300 -FYLQPYEK----EAIYGEPDHVITVDVVMDNLK-----NGV-NYAFFNNITYTAPKVPTLMTVLSS--GDQA----NNS 362 (534)
T ss_dssp -GGCCBSSC----CCCCCSCSEEEEEEEEEEECT-----TSC-EEEEETTBCCCCCSSCHHHHHTTS--GGGT----TCG
T ss_pred -ccceeCCC----CCCCCCCCeEEEEEEEeeccC-----Cce-eEEEECCCcccCCCCCceeeeccc--Cccc----CCC
Confidence 01222211 123345778887766553210 232 348899999999988766543211 1110 000
Q ss_pred CCCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCC----------CCCCCC
Q 008484 419 PKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIG----------NFDPVK 488 (564)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g----------~~~~~~ 488 (564)
. ....+..++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+ .|++..
T Consensus 363 ~--------------~~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~ 425 (534)
T 1zpu_A 363 E--------------IYGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDN 425 (534)
T ss_dssp G--------------GGCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTB
T ss_pred c--------------ccCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCccccccCcccccCccc
Confidence 0 0112356788999999999999975 679999999999999999864 344321
Q ss_pred CCCCCCCCCCCcceeeEecCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEec
Q 008484 489 YPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVED 546 (564)
Q Consensus 489 ~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~ 546 (564)
... ...+|.|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+
T Consensus 426 -~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~ 481 (534)
T 1zpu_A 426 -HPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDP 481 (534)
T ss_dssp -CCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH
T ss_pred -ccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECc
Confidence 112 25689999999999999999999999999999999999999999999998764
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=6.3e-89 Score=740.07 Aligned_cols=472 Identities=25% Similarity=0.447 Sum_probs=360.5
Q ss_pred cccCceEEEEEEEEEEE--eecCCce-eeEEEECCcCCCCeEEeecCCEEEEEEEeCC-CCCceeeeCCCCCCCCCCCCC
Q 008484 27 PAEAAIKKYQFDVQVKN--VSRLCHA-KPIVTVNGRFPGPTIYVREGDRVLVNVTNHA-QYNMSIHWHGLKQYRNGWADG 102 (564)
Q Consensus 27 ~~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l-~~~~~iH~HG~~~~~~~~~DG 102 (564)
+..+++++|+|++++.. +.+||.. +.+|+|||++|||+|+|++||+|+|+|+|+| .++|+|||||+++.+.+|+||
T Consensus 28 p~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG 107 (559)
T 2q9o_A 28 PDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDG 107 (559)
T ss_dssp CCCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSC
T ss_pred CCCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCC
Confidence 34677899999999999 8899999 9999999999999999999999999999999 689999999999998899999
Q ss_pred CCCccccccCC-CCeEEEEEEeCCCCcceeEecchhhhh-cceeeeEEEeCCCCCCCCCCCCCCcE-EEEeecccccCHH
Q 008484 103 PAYITQCPIKT-GNSYTYDFNVTGQRGTLWWHAHIFWLR-ATVYGAIVIMPKPGSPFPFPQPNREE-VILLGEWWHTDVE 179 (564)
Q Consensus 103 v~~~~~~~i~P-G~~~~y~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~ 179 (564)
+++++||+|+| |++++|+|++ .++||||||||...|. +||+|+|||+++... .+|.|. +|+++||++.+..
T Consensus 108 ~~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~ 181 (559)
T 2q9o_A 108 ANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAAD 181 (559)
T ss_dssp CBTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHH
T ss_pred CCccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHH
Confidence 99999999999 9999999998 7899999999999888 899999999987642 247787 9999999999887
Q ss_pred HHHHhhhccCCCCCCCceEEEcCcCCCCCCCCC-CCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcc
Q 008484 180 EVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSE-KHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT 258 (564)
Q Consensus 180 ~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~-~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~ 258 (564)
++..... +..+..+++++|||+... .|+. ...+.+++++|++|||||||+++.+.+.|+|+||+|+||++||.++
T Consensus 182 ~~~~~~~--~~~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 257 (559)
T 2q9o_A 182 DLVHFTQ--NNAPPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPV 257 (559)
T ss_dssp HHHHHHT--TSCCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred HHhhhhh--cCCCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCccc
Confidence 7654332 223456799999999753 3532 2457899999999999999999999999999999999999999999
Q ss_pred cceEecEEEECCCceEEEEEEeCCCCceeEEEEee--cCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhh
Q 008484 259 KPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARP--FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFAL 336 (564)
Q Consensus 259 ~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 336 (564)
+|+.++++.|+|||||||+|++++.+|+|+|++.. ...+. ...+....++|+|.+.....+... ..+. .+.. ..
T Consensus 258 ~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~~~P~~~-~~~~-~~~~-~~ 333 (559)
T 2q9o_A 258 NAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPGGLPTDE-GTPP-VDHQ-CL 333 (559)
T ss_dssp EEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCCSCCCCC-CCCC-CCCT-TC
T ss_pred CceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccC-CCCCCceeEEEEECCCCCCCCCCC-CCcC-CCcc-cc
Confidence 99999999999999999999999877999999986 32222 123345689999987543211111 0010 0100 00
Q ss_pred hhhhhcccCCCCCCCC-CCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecC-cchhhhhhhccccccccCCC
Q 008484 337 NYNKKLRSLNSPKFPA-DVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMP-QTALLQAHYFNLKGVFKADF 414 (564)
Q Consensus 337 ~~~~~~~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p-~~~~l~~~~~~~~g~~~~~~ 414 (564)
+. ..+.++.....|. ......+.++.+..... .+..+.|++||++|..+ ..++|...+.+. ..|
T Consensus 334 ~~-~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~-----~~~ 399 (559)
T 2q9o_A 334 DT-LDVRPVVPRSVPVNSFVKRPDNTLPVALDLT--------GTPLFVWKVNGSDINVDWGKPIIDYILTGN-----TSY 399 (559)
T ss_dssp CC-SCCCBSSCCBCCCTTCCCCGGGEEEEEEECS--------SSSSCEEEETTBCCCCCTTSCHHHHHHHTC-----CCC
T ss_pred cc-cccccCCCCCCCCcccccceeEEEEEEeecC--------CCceEEEEECCEecccCCCCCcHhHhhcCC-----ccC
Confidence 00 1122211110110 01111234444332211 22356799999999765 456665433211 111
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCceeeEEee-cCCEEEEEEEeCCC-CCCCCCCeeecCCceEEEeecC---------CC
Q 008484 415 PDKPPKPFNYTGAPLTASLGTSRATRLSKIA-FNSTIELVLQDTNL-LTVESHPFHLHGYNFFVVGTGI---------GN 483 (564)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ve~~l~n~~~-~~~~~HP~HlHG~~F~Vv~~g~---------g~ 483 (564)
+ .+..++.++ .+++++|+++|... ...+.||||||||+||||+++. |.
T Consensus 400 ~---------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~ 458 (559)
T 2q9o_A 400 P---------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFV 458 (559)
T ss_dssp C---------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCC
T ss_pred C---------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccc
Confidence 1 124455665 46788888888531 0157999999999999999987 66
Q ss_pred CCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEecC
Q 008484 484 FDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 547 (564)
Q Consensus 484 ~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~ 547 (564)
|++.+....+++.+|.|||||.|++++|++|||++||||.|||||||++|++.|||++|.|...
T Consensus 459 ~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~ 522 (559)
T 2q9o_A 459 FDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA 522 (559)
T ss_dssp CCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred cCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc
Confidence 6643223568899999999999999999999999999999999999999999999999988653
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1.4e-88 Score=729.73 Aligned_cols=469 Identities=31% Similarity=0.530 Sum_probs=359.0
Q ss_pred EEEEEEEEEEEeecCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCC-----CCceeeeCCCCCCCCCCCCCCCCcc
Q 008484 33 KKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ-----YNMSIHWHGLKQYRNGWADGPAYIT 107 (564)
Q Consensus 33 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~~ 107 (564)
..|+|++++..+++||..+.+|+|||++ ||+|++++||+|+|+|+|+|+ ++|+|||||+++.+.+|+||+++++
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4699999999999999999999999999 999999999999999999999 9999999999999889999999999
Q ss_pred ccccCCCCeEEEEEEeCCCCcceeEecchhhhh-cceeeeEEEeCCCCC-CCCCCCCCCcEEEEeecccccCHHHHHHhh
Q 008484 108 QCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR-ATVYGAIVIMPKPGS-PFPFPQPNREEVILLGEWWHTDVEEVEKQG 185 (564)
Q Consensus 108 ~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~iiV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 185 (564)
||+|+||++++|+|++++++||||||||.+.|. +||+|+|||+++.+. ..+++..++|++|+++||++....++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 999999999999999668899999999999988 899999999987532 222322346999999999998765321
Q ss_pred hccCCCCCCCceEEEcCcCCCCCCCCC-CCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEec
Q 008484 186 QKMGLPPNMSDAHTINGKPGPLFPCSE-KHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTE 264 (564)
Q Consensus 186 ~~~g~~~~~~~~~~iNG~~~~~~~~~~-~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 264 (564)
+ ...+++++|||+.. +.|+. ...+.+++++|++|||||+|+++.+.+.|+|+||+|+||++||.+++|+.++
T Consensus 161 ---~--~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---C--CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 1 13579999999974 56653 3458999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEEeCCCCceeEEEEeecCCCCC---CCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhh
Q 008484 265 AILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPI---PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKK 341 (564)
Q Consensus 265 ~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 341 (564)
++.|+|||||||+|++++.+|+|+|++.+...... .+.+....++|+|.+.....+.. +..+...... ..+
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~~~~~~~l~-----~~~ 307 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SANPNPAQLN-----EAD 307 (503)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CCCSSCCBCC-----GGG
T ss_pred eEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CCCCccCCCc-----ccc
Confidence 99999999999999999877999999986532211 11222347999998754321111 1111111000 012
Q ss_pred cccCCCCCCCC-CCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCC
Q 008484 342 LRSLNSPKFPA-DVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPK 420 (564)
Q Consensus 342 ~~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~ 420 (564)
+.++.....|. ..+...+.++.+.... ++. .|++||++|..+..++|...+. +....
T Consensus 308 l~p~~~~~~p~~~~~~~~~~~~~l~~~~---------~~~--~~~iNg~~~~~~~~P~l~~~~~---g~~~~-------- 365 (503)
T 1hfu_A 308 LHALIDPAAPGIPTPGAADVNLRFQLGF---------SGG--RFTINGTAYESPSVPTLLQIMS---GAQSA-------- 365 (503)
T ss_dssp CBBSSSCSCSSCSSTTCSSEEEECCEEE---------ETT--EEEETTBCCCCCSSCHHHHHHT---TCCSG--------
T ss_pred ccccCccCCCCcccCCcceEEEEEEeec---------cCc--eEEECCCccCCCCCcchhhhhc---CCccc--------
Confidence 33332222221 1122345544332221 222 5899999999887776655321 21100
Q ss_pred CCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCc
Q 008484 421 PFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIE 500 (564)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~ 500 (564)
.....+..++.++.|++|||+++|.. ..+.||||||||+||||+++.+. .+++.+|.|
T Consensus 366 ------------~~~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~~ 423 (503)
T 1hfu_A 366 ------------NDLLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS--------TYNFVNPVK 423 (503)
T ss_dssp ------------GGSSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC--------CCCCSSBCE
T ss_pred ------------ccCCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC--------ccccCCCCe
Confidence 00112467789999999999999532 26799999999999999997442 457889999
Q ss_pred ceeeEe-cCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEecCCCCCCCCCCCC-CCCCCC
Q 008484 501 RNTAAV-PTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPP-TDLPPC 564 (564)
Q Consensus 501 rDTv~v-p~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~~~c 564 (564)
||||.| ++++|++|||++||||.|+|||||++|++.|||++|.|.+... .++.++| .+.+.|
T Consensus 424 rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 424 RDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANT--VDANNPPVEWAQLC 487 (503)
T ss_dssp ESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHH--HHHCCCCHHHHHHH
T ss_pred eeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhh--hhccCCChHHhhhc
Confidence 999999 9999999999999999999999999999999999998865332 2333334 345555
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1.4e-81 Score=665.33 Aligned_cols=404 Identities=23% Similarity=0.374 Sum_probs=320.0
Q ss_pred cCceEEEEEEEEEEEeecCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccc
Q 008484 29 EAAIKKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQ 108 (564)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~ 108 (564)
.+.+++|+|++++..++++|..+.+|+|||++|||+|+|++||+|+|+|+|+++++++|||||+++.+ ++||++
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---- 86 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---- 86 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----
Confidence 45678999999999999999999999999999999999999999999999999999999999999876 699986
Q ss_pred cccCCCCeEEEEEEeC-CCCcceeEecchhh----hh-cceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHHH-
Q 008484 109 CPIKTGNSYTYDFNVT-GQRGTLWWHAHIFW----LR-ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEEV- 181 (564)
Q Consensus 109 ~~i~PG~~~~y~~~~~-~~~Gt~wYH~h~~~----~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~- 181 (564)
+.|+||++++|+|+++ +++||||||||.++ |. +||+|+|||+++.+..... ..++|++|+++||++......
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~-~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPEL-REAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHH-HTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccC-CCCCcEEEEEEeeeeCCCCcCC
Confidence 4699999999999983 47999999999864 44 8999999999875421111 257899999999998753100
Q ss_pred -HHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcc-c
Q 008484 182 -EKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-K 259 (564)
Q Consensus 182 -~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~-~ 259 (564)
.......| ..++.++|||+.+ +.+++++| +|||||+|+++.+.+.|+|+||+|+||+.||+++ +
T Consensus 166 ~~~~~~~~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~ 231 (439)
T 2xu9_A 166 HTPMDWMNG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEE 231 (439)
T ss_dssp CCHHHHHHC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred CCccccccC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCC
Confidence 00000011 3458999999976 78999999 9999999999999999999999999999999997 8
Q ss_pred ceEecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCC--------------CCCCCceEEEEEEccCCCCCCCCCCC
Q 008484 260 PFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPI--------------PVDNKTATGILQYKGIPNSLLPTLAQ 325 (564)
Q Consensus 260 p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~--------------~~~~~~~~ail~y~~~~~~~~~~~p~ 325 (564)
|+.++++.|+|||||||+|++++ +|+|+|++.....+.. ........++++|.+.... ..+
T Consensus 232 p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~-- 306 (439)
T 2xu9_A 232 PLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LPL-- 306 (439)
T ss_dssp EEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CCC--
T ss_pred ceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--ccC--
Confidence 99999999999999999999999 7999999986543211 0112346788999764321 111
Q ss_pred CCCCCChhhhhhhhhhcccCCCCCCCCCCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhcc
Q 008484 326 LPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFN 405 (564)
Q Consensus 326 ~p~~~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~ 405 (564)
|. .+.++ .+.+ .+ ..++++.+.... .| ..|++|+++|..+.
T Consensus 307 -p~------------~l~~~--~~l~--~~-~~~r~~~l~~~~---------~g--~~~~iNg~~~~~~~---------- 347 (439)
T 2xu9_A 307 -PK------------ALSPF--PTLP--AP-VVTRRLVLTEDM---------MA--ARFFINGQVFDHRR---------- 347 (439)
T ss_dssp -CS------------CCCCC--CCCC--CC-SEEEEEEEEEEG---------GG--TEEEETTBCCCTTC----------
T ss_pred -cc------------cCCCc--ccCC--CC-CcceEEEEEeec---------cC--ceEeECCEECCCCC----------
Confidence 11 01010 0011 11 124666555433 11 24889988763221
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCC
Q 008484 406 LKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFD 485 (564)
Q Consensus 406 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~ 485 (564)
....++.|++++|+|.|.+ .+.||||||||+||||+++.+.+
T Consensus 348 ----------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~F~Vl~~~g~~~- 389 (439)
T 2xu9_A 348 ----------------------------------VDLKGQAQTVEVWEVENQG---DMDHPFHLHVHPFQVLSVGGRPF- 389 (439)
T ss_dssp ----------------------------------CCEEECTTCEEEEEEEECS---SSCEEEEESSCCBEEEEETTEEC-
T ss_pred ----------------------------------CceecCCCCEEEEEEEcCC---CCCCCceeCCCcEEEEeeCCCCC-
Confidence 1246789999999999975 68999999999999999964432
Q ss_pred CCCCCCCCCCCCCCcceeeEecCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEe
Q 008484 486 PVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 486 ~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.+|.|||||.|++++|++|||++||||.|+|||||++|||.|||+.|+|.
T Consensus 390 ----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 390 ----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp ----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred ----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 36899999999999999999999999999999999999999999999874
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=4e-81 Score=662.42 Aligned_cols=406 Identities=18% Similarity=0.195 Sum_probs=317.5
Q ss_pred eEEEEEEEEEEEeec-CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccc
Q 008484 32 IKKYQFDVQVKNVSR-LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCP 110 (564)
Q Consensus 32 ~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~ 110 (564)
++.|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|+++++|+|||||+++.+. +||++ ||+
T Consensus 18 ~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~~ 92 (451)
T 2uxt_A 18 GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---ARM 92 (451)
T ss_dssp SCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GGC
T ss_pred ceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cCc
Confidence 578999999999998 799999999999999999999999999999999999999999999999986 99997 899
Q ss_pred cCCCCeEEEEEEeCCCCcceeEecchhh----hh-cceeeeEEEeCCCCCCCCCCC--CCCcEEEEeecccccCHHHHHH
Q 008484 111 IKTGNSYTYDFNVTGQRGTLWWHAHIFW----LR-ATVYGAIVIMPKPGSPFPFPQ--PNREEVILLGEWWHTDVEEVEK 183 (564)
Q Consensus 111 i~PG~~~~y~~~~~~~~Gt~wYH~h~~~----~~-~Gl~G~iiV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 183 (564)
|+||++++|+|++++++||||||||.++ |. +||+|+|||+++.+...+++. .++|++|+++||++....++.
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~- 171 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE- 171 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE-
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee-
Confidence 9999999999999556999999999843 44 899999999998654333332 478999999999987543321
Q ss_pred hhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEE-cCceeEEEeeCCCcc-cce
Q 008484 184 QGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAI-AGHNFTVVEVDAVYT-KPF 261 (564)
Q Consensus 184 ~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l-~gh~~~via~DG~~~-~p~ 261 (564)
+...+.....+++++|||+.+ +.+++++| +|||||+|+++.+.+.|+| +||+|+||++||+++ +|.
T Consensus 172 -~~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~ 239 (451)
T 2uxt_A 172 -YNEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPV 239 (451)
T ss_dssp -CCCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEE
T ss_pred -cccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCce
Confidence 111223445679999999986 68999999 9999999999999999999 899999999999988 899
Q ss_pred EecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCC-------CCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhh
Q 008484 262 TTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPI-------PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEF 334 (564)
Q Consensus 262 ~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~ 334 (564)
.++++.|+|||||||+|++++ +|.|+|++.....+.. ........++++|.......+.. ...|.
T Consensus 240 ~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~-~~~p~------ 311 (451)
T 2uxt_A 240 SVKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVT-DSLPM------ 311 (451)
T ss_dssp EESSEEECTTCEEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS------
T ss_pred EeceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCcc-ccCcc------
Confidence 999999999999999999998 6999999876432111 11223346788887643221110 01111
Q ss_pred hhhhhhhcccCCCCCCCCCCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCC
Q 008484 335 ALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADF 414 (564)
Q Consensus 335 ~~~~~~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~ 414 (564)
.|.++... + .+...++++.+ . + .|++||++|..+
T Consensus 312 ------~L~~~~~~--~--~~~~~~~~~~l--~-----------~---~~~iNg~~f~~~-------------------- 345 (451)
T 2uxt_A 312 ------RLLPTEIM--A--GSPIRSRDISL--G-----------D---DPGINGQLWDVN-------------------- 345 (451)
T ss_dssp ------CSSSSCCC--C--CCCSEEEEEEE--C-----------S---SSSBTTBCCCTT--------------------
T ss_pred ------ccCCCCCC--C--CCCcceEEEEE--e-----------e---EEEECCEeCCCC--------------------
Confidence 12222111 1 12223333322 1 1 378888776322
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCC
Q 008484 415 PDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYN 494 (564)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~ 494 (564)
...+.++.|++|+|+|+|. +.||||||||+||||+++. ..++
T Consensus 346 ------------------------~~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G---------~~~~ 387 (451)
T 2uxt_A 346 ------------------------RIDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNG---------AMPF 387 (451)
T ss_dssp ------------------------CCCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETT---------BCCC
T ss_pred ------------------------CCcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCC---------cCCC
Confidence 1135678999999999994 5899999999999999852 1345
Q ss_pred CCCCCcceeeEecCCCEEEEEEEecCcee----eEEEeechhchhcccEEEEEEecCCC
Q 008484 495 LVDPIERNTAAVPTGGWTAIRFRADNPGV----WFMHCHLELHTGWGLKTAFAVEDGPG 549 (564)
Q Consensus 495 ~~~p~~rDTv~vp~~g~~~irf~adnpG~----wl~HCHil~H~d~GM~~~~~V~~~~~ 549 (564)
+.+|.|||||.| +++++|+|++||||. |||||||++|||.|||+.|+|.+...
T Consensus 388 ~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~ 444 (451)
T 2uxt_A 388 PEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPR 444 (451)
T ss_dssp GGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC
T ss_pred cccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCcc
Confidence 678999999999 999999999999988 99999999999999999999986443
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.6e-78 Score=653.00 Aligned_cols=421 Identities=21% Similarity=0.295 Sum_probs=317.8
Q ss_pred ceEEEEEEEEEEE--eecCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccc
Q 008484 31 AIKKYQFDVQVKN--VSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQ 108 (564)
Q Consensus 31 ~~~~~~l~~~~~~--~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~ 108 (564)
.++.|+|++++.. +.++|..+.+|+|||++|||+|++++||+|+|+|+|+++++++|||||+++... +||++ |
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~ 109 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---E 109 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---S
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---C
Confidence 3578999999644 567898899999999999999999999999999999999999999999998764 99975 7
Q ss_pred cccCCCCeEEEEEEeCCCCcceeEecchhhhh-----cceeeeEEEeCCCCCCCCCCC--CCCcEEEEeecccccCHHHH
Q 008484 109 CPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR-----ATVYGAIVIMPKPGSPFPFPQ--PNREEVILLGEWWHTDVEEV 181 (564)
Q Consensus 109 ~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~-----~Gl~G~iiV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~ 181 (564)
|+|+||++++|+|++.+++||||||||.++++ +||+|+|||+++.+...+++. .+.|++|+++||+.....++
T Consensus 110 ~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~ 189 (534)
T 3abg_A 110 DITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNL 189 (534)
T ss_dssp SCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCB
T ss_pred CCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCce
Confidence 99999999999999855589999999998643 799999999998876555543 26788999999987654322
Q ss_pred HHhhhccC-CCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcC-------ceeEEEee
Q 008484 182 EKQGQKMG-LPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAG-------HNFTVVEV 253 (564)
Q Consensus 182 ~~~~~~~g-~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~g-------h~~~via~ 253 (564)
.. ..+ .....++.++|||+.+ +.+++++ ++|||||||+++.+.+.|+|++ |+|+||++
T Consensus 190 ~~---~~~~~~~~~gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~ 255 (534)
T 3abg_A 190 VT---TNGELNSFWGDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIAS 255 (534)
T ss_dssp CC---CTTCSSCCCCSEEEETTEES----------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEE
T ss_pred ec---cCCCCccccCceeccCCccC----------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEe
Confidence 11 111 1234579999999987 5678888 5999999999999999999987 99999999
Q ss_pred CCCcc-cceEecEEEECCCceEEEEEEeCCCCc-eeEEEEeecC-CCCC-CCCCCceEEEEEEccCCCCCCCCCCCCCCC
Q 008484 254 DAVYT-KPFTTEAILIAPGQTTNVLVQANQKPG-RYFMAARPFN-DAPI-PVDNKTATGILQYKGIPNSLLPTLAQLPAS 329 (564)
Q Consensus 254 DG~~~-~p~~~d~v~l~pg~r~dv~v~~~~~pg-~y~l~~~~~~-~~~~-~~~~~~~~ail~y~~~~~~~~~~~p~~p~~ 329 (564)
||+++ +|+.++++.|+|||||||+|++++.+| +|+|+..... .+.. ........++++|..............|.
T Consensus 256 DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~- 334 (534)
T 3abg_A 256 DSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPA- 334 (534)
T ss_dssp TTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCC-
T ss_pred CCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCcc-
Confidence 99864 899999999999999999999998667 6999875321 1111 01112345788887543210000000110
Q ss_pred CChhhhhhhhhhcccCCCCCCCCCCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhcccccc
Q 008484 330 NDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGV 409 (564)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~ 409 (564)
.+..+. .+. .+...++++.+ .. . ...|++||++|..+..
T Consensus 335 -----------~L~~~~---~p~-~~~~~~~~~~~----~~-------~--~~~w~iNG~~f~~~~~------------- 373 (534)
T 3abg_A 335 -----------NLRDVP---FPS-PTTNTPRQFRF----GR-------T--GPTWTINGVAFADVQN------------- 373 (534)
T ss_dssp -----------CCCCCS---CCC-CCCCCCEEEEC----SC-------C--CSTTCCCCBTTBCTTS-------------
T ss_pred -----------ccccCC---CCC-CccccceEEEE----ec-------c--CceeEECCcccCCCCC-------------
Confidence 121111 111 11223444432 11 1 1247889887643211
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCC
Q 008484 410 FKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKY 489 (564)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~ 489 (564)
.....++.|++++|+|+|.+ ..+.||||||||+||||+++.|.+..
T Consensus 374 -----------------------------p~l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl~~~~g~~~~--- 419 (534)
T 3abg_A 374 -----------------------------RLLANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVISRTSGNNAR--- 419 (534)
T ss_dssp -----------------------------CCCCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEEEESSCCSSS---
T ss_pred -----------------------------cceeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEEEEcCCCCcC---
Confidence 11235678999999999964 24699999999999999996554321
Q ss_pred CCCCCCCCCCcceeeEecCCCEEEEEEE-ecCceeeEEEeechhchhcccEEEEEEecCC
Q 008484 490 PANYNLVDPIERNTAAVPTGGWTAIRFR-ADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 548 (564)
Q Consensus 490 ~~~~~~~~p~~rDTv~vp~~g~~~irf~-adnpG~wl~HCHil~H~d~GM~~~~~V~~~~ 548 (564)
..+++.+ .|||||.|+|+++++|||+ +||||.|||||||++|+|.|||+.|.|...+
T Consensus 420 -~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 420 -TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp -CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred -cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 1234455 8999999999999999998 8999999999999999999999999998755
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=7.2e-78 Score=648.02 Aligned_cols=430 Identities=19% Similarity=0.240 Sum_probs=315.7
Q ss_pred ceEEEEEEEEEEEeec--CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCC----------------------Cce
Q 008484 31 AIKKYQFDVQVKNVSR--LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQY----------------------NMS 86 (564)
Q Consensus 31 ~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~----------------------~~~ 86 (564)
...+|+|++++..... ++..+.+|+|||++|||+|+|++||+|+|+|+|+|++ +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 3455999999987665 4578999999999999999999999999999999975 899
Q ss_pred eeeCCCCCCCCCCCCCCCC--ccccccCCCCeE---EEEEEeCCCCcceeEecchhh----hh-cceeeeEEEeCCCCCC
Q 008484 87 IHWHGLKQYRNGWADGPAY--ITQCPIKTGNSY---TYDFNVTGQRGTLWWHAHIFW----LR-ATVYGAIVIMPKPGSP 156 (564)
Q Consensus 87 iH~HG~~~~~~~~~DGv~~--~~~~~i~PG~~~---~y~~~~~~~~Gt~wYH~h~~~----~~-~Gl~G~iiV~~~~~~~ 156 (564)
|||||+++.+ ++||+++ +++|+|+||++| +|+|++++++||||||||.++ |. +||+|+|||+++.+..
T Consensus 104 iHwHGl~~~~--~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTPD--DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCCG--GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCCC--ccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 9999999985 4999996 789999999555 999998567999999999975 33 7999999999987655
Q ss_pred CCCCCCCCcEEEEeecccccCHHHHHHhhh----------ccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEE
Q 008484 157 FPFPQPNREEVILLGEWWHTDVEEVEKQGQ----------KMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTY 226 (564)
Q Consensus 157 ~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~----------~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~ 226 (564)
.+++..++|++|+++||++....++..... ........+++++|||+.+ +.+++++ ++|
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~-~~~ 250 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEP-RKY 250 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCS-SEE
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecC-CEE
Confidence 555566889999999998765433211110 0011234679999999987 6789988 489
Q ss_pred EEEEEecCCCCeEEEEEcCc-eeEEEeeCCCcc-cceEecEEEECCCceEEEEEEeCCCCceeE-EEEeecCCCCCCCCC
Q 008484 227 LLRIINAALNDELFFAIAGH-NFTVVEVDAVYT-KPFTTEAILIAPGQTTNVLVQANQKPGRYF-MAARPFNDAPIPVDN 303 (564)
Q Consensus 227 rlriiN~~~~~~~~~~l~gh-~~~via~DG~~~-~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~-l~~~~~~~~~~~~~~ 303 (564)
||||||+++.+.+.|+|+|| +|+||++||+++ +|+.++++.|+|||||||+|++++.+|+|. +... ..+...+..
T Consensus 251 RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~--~~~~~~~~~ 328 (513)
T 2wsd_A 251 RFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANS--AGCGGDVNP 328 (513)
T ss_dssp EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEEC--CCSSSSCCT
T ss_pred EEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEec--ccccccCCC
Confidence 99999999999999999999 999999999998 899999999999999999999998668743 3322 111111122
Q ss_pred CceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCCCCcCcceEEEEEEccCCCCCCcccCCceee
Q 008484 304 KTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLL 383 (564)
Q Consensus 304 ~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~ 383 (564)
....++++|........+.....|.. +..+ +..+ ..+...++++.+...... .| ...
T Consensus 329 ~~~~~il~~~~~~~~~~~~~~~~p~~------------l~~~--~~~~-~~~~~~~~~~~l~~~~~~-------~g-~~~ 385 (513)
T 2wsd_A 329 ETDANIMQFRVTKPLAQKDESRKPKY------------LASY--PSVQ-HERIQNIRTLKLAGTQDE-------YG-RPV 385 (513)
T ss_dssp TTTTEEEEEECCSCCSSCCCCCCCSB------------CSCC--GGGC-CCCEEEEEEEEEEEEECT-------TS-CEE
T ss_pred CCCcceEEEEeccCcccCccCCCCcc------------ccCC--CCcc-cCCCcceEEEEEEeecCC-------CC-Cce
Confidence 23457888875432111100111110 1100 0001 111223455554433221 22 234
Q ss_pred eeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCC
Q 008484 384 ATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVE 463 (564)
Q Consensus 384 ~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~ 463 (564)
|.+||++|..+ ..+.++.|++|+|+|.|.+ .+
T Consensus 386 ~~iNg~~~~~~---------------------------------------------~~~~~~~g~~~~w~l~N~~---~~ 417 (513)
T 2wsd_A 386 LLLNNKRWHDP---------------------------------------------VTETPKVGTTEIWSIINPT---RG 417 (513)
T ss_dssp EEETTBCTTSC---------------------------------------------CCBCCBTTCEEEEEEEECS---SS
T ss_pred EeECCccCCCc---------------------------------------------ccEecCCCCEEEEEEEcCC---CC
Confidence 67888765221 1124568999999999965 67
Q ss_pred CCCeeecCCceEEEeecCC---CCCCCC------CCCCCCCCCCCcceeeEecCCCEEEEEEEe-cCceeeEEEeechhc
Q 008484 464 SHPFHLHGYNFFVVGTGIG---NFDPVK------YPANYNLVDPIERNTAAVPTGGWTAIRFRA-DNPGVWFMHCHLELH 533 (564)
Q Consensus 464 ~HP~HlHG~~F~Vv~~g~g---~~~~~~------~~~~~~~~~p~~rDTv~vp~~g~~~irf~a-dnpG~wl~HCHil~H 533 (564)
.||||||||+||||+++.. .|++.. .+.......+.|||||.|+++++++|+|++ ||||.|||||||++|
T Consensus 418 ~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H 497 (513)
T 2wsd_A 418 THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEH 497 (513)
T ss_dssp CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHH
T ss_pred CcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhh
Confidence 9999999999999998642 121110 000112234569999999999999999998 899999999999999
Q ss_pred hhcccEEEEEEec
Q 008484 534 TGWGLKTAFAVED 546 (564)
Q Consensus 534 ~d~GM~~~~~V~~ 546 (564)
+|.|||+.|+|.+
T Consensus 498 ~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 498 EDYDMMRPMDITD 510 (513)
T ss_dssp HTTTCEEEEEEBC
T ss_pred hhcCCceeEEEeC
Confidence 9999999999975
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.6e-77 Score=630.94 Aligned_cols=417 Identities=20% Similarity=0.321 Sum_probs=309.1
Q ss_pred ccCceEEEEEEEEEEEeec-CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCc
Q 008484 28 AEAAIKKYQFDVQVKNVSR-LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYI 106 (564)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 106 (564)
..+.+++|+|++++..++. +|..+.+|+|||++|||+||+++||+|+|+|+|+++++|+|||||+++.+ ++||++
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 3678899999999999996 69999999999999999999999999999999999999999999999864 599986
Q ss_pred cccccCCCCeEEEEEEeCCC-CcceeEecchh----hhh-cceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHH
Q 008484 107 TQCPIKTGNSYTYDFNVTGQ-RGTLWWHAHIF----WLR-ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEE 180 (564)
Q Consensus 107 ~~~~i~PG~~~~y~~~~~~~-~Gt~wYH~h~~----~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 180 (564)
||+|+||++++|+|+++++ +||||||||.+ .|. +||+|+|||+++.+...++ +.++ ++++||+.+...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999998433 79999999974 344 8999999999987654433 3444 9999998865432
Q ss_pred HHHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcc-c
Q 008484 181 VEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-K 259 (564)
Q Consensus 181 ~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~-~ 259 (564)
+.............++.++|||+.+ +.+++++|+ ||||+|+++.+.+.|+|+||+|+||++||.++ +
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~ 264 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEK 264 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEE
T ss_pred cccccchhhccCCcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCC
Confidence 2100000000123568999999976 689999999 99999999999999999999999999998876 8
Q ss_pred ceEecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCC-CCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhh
Q 008484 260 PFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPV-DNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNY 338 (564)
Q Consensus 260 p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~ 338 (564)
|+.++++.|+|||||||+|++++ ++.|.|.+.......... .......++++..... ... .|.
T Consensus 265 P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~---lP~---------- 328 (481)
T 3zx1_A 265 TIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NVE---LPK---------- 328 (481)
T ss_dssp EEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CCC---CCS----------
T ss_pred ceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEEEEecCCC--Ccc---CCc----------
Confidence 99999999999999999999998 689999886543211111 1112333444432211 011 111
Q ss_pred hhhcccCCCCCCCCCCCcCcceEEEEEEccCCCCCCccc-CCce-------eeeeecceeeecCcchhhhhhhccccccc
Q 008484 339 NKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCV-NGTR-------LLATLNNISFVMPQTALLQAHYFNLKGVF 410 (564)
Q Consensus 339 ~~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~-~g~~-------~~~~~n~~s~~~p~~~~l~~~~~~~~g~~ 410 (564)
.+..+ +.. ..+ ...+++.+..... ...... .+.. ..|++|++.|..
T Consensus 329 --~l~~~--~~~--~~~-~~~r~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~----------------- 382 (481)
T 3zx1_A 329 --NLKIF--KPS--EEP-KEFKEIIMSEDHM--QMHGMMGKSEGELKIALASMFLINRKSYDL----------------- 382 (481)
T ss_dssp --CSCCC--CCC--CCC-CEEEEEEEEECCS--TTTTGGGCCHHHHHHHHHTTEEETTBCCCT-----------------
T ss_pred --cccCC--CCC--CCC-CcEEEEEEeccch--hcccccccccccccccccceeEECCEeCCC-----------------
Confidence 01111 000 111 1334444432211 000000 0000 126777654411
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeec-CCCCCCCCC
Q 008484 411 KADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTG-IGNFDPVKY 489 (564)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g-~g~~~~~~~ 489 (564)
....+.++.|++|+|+|.|.+ .+.|||||||+.|+|+++. .|.
T Consensus 383 ---------------------------~~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~~~~~g~------ 426 (481)
T 3zx1_A 383 ---------------------------KRIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELISSKLNGK------ 426 (481)
T ss_dssp ---------------------------TCCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEEEEETTE------
T ss_pred ---------------------------CCceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEEecccCC------
Confidence 123467789999999999964 7899999999999999983 111
Q ss_pred CCCCCCCCCCcceeeEecCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEe
Q 008484 490 PANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 490 ~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
......+.|||||.|+|+++++|+|+|||||.|||||||++|+|.|||+.|+|.
T Consensus 427 --~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 427 --VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp --EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred --CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 111235789999999999999999999999999999999999999999999986
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=8e-77 Score=628.38 Aligned_cols=395 Identities=19% Similarity=0.309 Sum_probs=300.8
Q ss_pred eEEEEEEEEEEEeecCCceeeEEEECCc-CCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccc
Q 008484 32 IKKYQFDVQVKNVSRLCHAKPIVTVNGR-FPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCP 110 (564)
Q Consensus 32 ~~~~~l~~~~~~~~~~g~~~~~~~~Ng~-~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~ 110 (564)
.+.|+|++ |+|||+ +|||+|++++||+|+|+|+|+|+++|+|||||+++.+ ++||+++ |+
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~ 80 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FA 80 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GC
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---cc
Confidence 55677776 899999 9999999999999999999999999999999999964 4999987 99
Q ss_pred cCCCCeEEEEEEeCCCCcceeEecc----hhhhh-cceeeeEEEeCCCCCCCCCCCCC-CcEEEEeecccccCHHHHHHh
Q 008484 111 IKTGNSYTYDFNVTGQRGTLWWHAH----IFWLR-ATVYGAIVIMPKPGSPFPFPQPN-REEVILLGEWWHTDVEEVEKQ 184 (564)
Q Consensus 111 i~PG~~~~y~~~~~~~~Gt~wYH~h----~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~-~e~~l~~~d~~~~~~~~~~~~ 184 (564)
|+||++++|+|++++++|||||||| ...|. +||+|+|||+++.+. .+++ ++ +|++|+++||++.+ .++...
T Consensus 81 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~ 157 (448)
T 3aw5_A 81 ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYN 157 (448)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECC
T ss_pred CCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-Cccccc
Confidence 9999999999999558999999999 45555 899999999998765 3332 35 89999999999876 332110
Q ss_pred h-hccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEE--cC---ceeEEEeeCCCcc
Q 008484 185 G-QKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAI--AG---HNFTVVEVDAVYT 258 (564)
Q Consensus 185 ~-~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l--~g---h~~~via~DG~~~ 258 (564)
. ...+.....++.++|||+.+ +.+++++| +|||||+|+++.+.+.|+| +| |+|+||++||+++
T Consensus 158 ~~~~~~~~~~~~~~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~ 226 (448)
T 3aw5_A 158 PTPMEMIAGFLGNAVLVNGVKD----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFL 226 (448)
T ss_dssp CCHHHHHHCCCCSEEEETTEET----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEE
T ss_pred ccccccccCccccEEEECCccc----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCcc
Confidence 0 00011124569999999986 78999999 9999999999999999999 99 9999999999999
Q ss_pred c-ceEecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCC----------CCCCCceEEEEEEccCCCCCCCCCCCCC
Q 008484 259 K-PFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPI----------PVDNKTATGILQYKGIPNSLLPTLAQLP 327 (564)
Q Consensus 259 ~-p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~p~~p 327 (564)
+ |..++++.|+|||||||+|++++ +.|+|++.+...+.. ........++++|.+....+. |
T Consensus 227 ~~P~~~~~l~l~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p 298 (448)
T 3aw5_A 227 ARPIEVRALFLAPAERAEVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------V 298 (448)
T ss_dssp EEEEEESCEEECTTCEEEEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------C
T ss_pred CCceEeceEEECCcceEEEEEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------c
Confidence 6 99999999999999999999984 799999876543211 112234577888865432211 1
Q ss_pred CCCChhhhhhhhhhcccCCCCCCCCCCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhcccc
Q 008484 328 ASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLK 407 (564)
Q Consensus 328 ~~~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~ 407 (564)
. .+..+... ..+...++++.+... ...|++|+++|..++
T Consensus 299 ~------------~L~~lp~~----~~~~~~~~~~~l~~~-------------~~~~~iNg~~~~~~~------------ 337 (448)
T 3aw5_A 299 E------------ALSDPPPE----PPKPTRTRRFALSLS-------------GMQWTINGMFWNASN------------ 337 (448)
T ss_dssp C------------CCSCCCCC----CCCCSEEEEEEEEEE-------------TTEEEETTBCCCTTC------------
T ss_pred c------------ccCCCCCC----CCCCCceEEEEEeCC-------------CceeeECCCcCCCCC------------
Confidence 0 01111100 122334555554321 124899998774320
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCcCCCCceeeEE-eecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCC
Q 008484 408 GVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSK-IAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDP 486 (564)
Q Consensus 408 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~ 486 (564)
..+. ++.|++|+|+|+|.+ ..+.||||||||+||||+++ |.+..
T Consensus 338 --------------------------------p~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~~~ 382 (448)
T 3aw5_A 338 --------------------------------PLFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSPRQ 382 (448)
T ss_dssp --------------------------------TTCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCCHH
T ss_pred --------------------------------CceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCCcc
Confidence 1123 578999999999964 26799999999999999984 43321
Q ss_pred CCCCCCC----CCCCCCcceeeEecCCCEEEEE--EE---ecCceeeEEEeechhchhcccEEEEEEe
Q 008484 487 VKYPANY----NLVDPIERNTAAVPTGGWTAIR--FR---ADNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 487 ~~~~~~~----~~~~p~~rDTv~vp~~g~~~ir--f~---adnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
......+ +..++.|||||.|+++++++|+ |+ +||| |+|||||++|||.|||+.|+|.
T Consensus 383 ~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 383 VAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp HHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred cccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 1111122 3345679999999999999665 88 8999 9999999999999999999873
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2.6e-75 Score=646.11 Aligned_cols=464 Identities=19% Similarity=0.254 Sum_probs=307.2
Q ss_pred cCceEEEEEEEEEEEeec--CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCC----------------------
Q 008484 29 EAAIKKYQFDVQVKNVSR--LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN---------------------- 84 (564)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~---------------------- 84 (564)
....+.|+|++++..... ++....+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 29 ~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~ 108 (612)
T 3gyr_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccc
Confidence 344577889888877664 55678999999999999999999999999999999654
Q ss_pred -------------------ceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecchhh----hh-
Q 008484 85 -------------------MSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFW----LR- 140 (564)
Q Consensus 85 -------------------~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~----~~- 140 (564)
|+|||||+++.+ ++||++ ||+|.||++|+|+|++++++||||||+|.++ |.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~ 183 (612)
T 3gyr_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVM 183 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTT
T ss_pred cccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhh
Confidence 678999998865 489875 8999999999999998666899999999854 44
Q ss_pred cceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHHHHHhhh-------------c---cCCCCCCCceEEEcCcC
Q 008484 141 ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEEVEKQGQ-------------K---MGLPPNMSDAHTINGKP 204 (564)
Q Consensus 141 ~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-------------~---~g~~~~~~~~~~iNG~~ 204 (564)
+||+|+|||+++.+...+++.+++|++|+++||++........... . .......++.++|||+.
T Consensus 184 ~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~ 263 (612)
T 3gyr_A 184 AGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI 263 (612)
T ss_dssp TTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE
T ss_pred ccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCc
Confidence 8999999999988766666678999999999998754322111100 0 00123456889999998
Q ss_pred CCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCc-------eeEEEeeCCCcc-cceEe------cEEEECC
Q 008484 205 GPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGH-------NFTVVEVDAVYT-KPFTT------EAILIAP 270 (564)
Q Consensus 205 ~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh-------~~~via~DG~~~-~p~~~------d~v~l~p 270 (564)
+ +.+.++. ++|||||||+++.+.+.|+|++| +|+|||+||+++ +|+.+ ++|.|++
T Consensus 264 ~----------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~p 332 (612)
T 3gyr_A 264 W----------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAP 332 (612)
T ss_dssp S----------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECT
T ss_pred c----------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEecc
Confidence 7 6777775 68999999999999999999998 599999999988 56655 4899999
Q ss_pred CceEEEEEEeCCCCceeEEEEeecCCCCC----CCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCC
Q 008484 271 GQTTNVLVQANQKPGRYFMAARPFNDAPI----PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLN 346 (564)
Q Consensus 271 g~r~dv~v~~~~~pg~y~l~~~~~~~~~~----~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~ 346 (564)
||||||+|++++.+|.++........... .........+++|........... ..|..... .
T Consensus 333 GeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~------------~- 398 (612)
T 3gyr_A 333 AERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSF-ALPEVLSG------------S- 398 (612)
T ss_dssp TCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCC-CCCSSCCS------------S-
T ss_pred ceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcc-cccccccc------------c-
Confidence 99999999999976655544332211111 111233455666654322111100 11110000 0
Q ss_pred CCCCCCCCCcCcceEEEEEEccCCCCCCcccCCceeeeeecce----eeecCcchhhhhhhccccccccCCCCCCCCCCC
Q 008484 347 SPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNI----SFVMPQTALLQAHYFNLKGVFKADFPDKPPKPF 422 (564)
Q Consensus 347 ~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~----s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~ 422 (564)
........+. ..+...... ..... .......+.+... .+..+....+. ..........+
T Consensus 399 ~~~~~~~~~~-~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 461 (612)
T 3gyr_A 399 FRRMSHDIPH-GHRLIVLTP-PGTKG----SGGHPEIWEMAEVEDPADVQVPAEGVIQ-----------VTGADGRTKTY 461 (612)
T ss_dssp CCCCCTTSCC-EEEEEEEEC-TTCTT----TTTCCEEEEEEECC-----CCSCTTEEE-----------EECTTSCEEEE
T ss_pred cccccccccc-ccccccccc-ccccc----ccccccccccccccccccccccccceee-----------eccCCCccccc
Confidence 0000001110 011111110 00000 0000111111110 00000000000 00000000000
Q ss_pred CCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCC---C-----------
Q 008484 423 NYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPV---K----------- 488 (564)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~---~----------- 488 (564)
..++ ........+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.++.. .
T Consensus 462 ~~n~-------~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~ 531 (612)
T 3gyr_A 462 RRTA-------RTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDP 531 (612)
T ss_dssp EEEE-------CSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEE
T ss_pred cccC-------ccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCcccccccccccccccccc
Confidence 1111 1112345577899999999999975 78999999999999999864333221 0
Q ss_pred -CCCCCCCCCCCcceeeEecCCCEEEEEEE-ecCceeeEEEeechhchhcccEEEEEEecCCC
Q 008484 489 -YPANYNLVDPIERNTAAVPTGGWTAIRFR-ADNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 549 (564)
Q Consensus 489 -~~~~~~~~~p~~rDTv~vp~~g~~~irf~-adnpG~wl~HCHil~H~d~GM~~~~~V~~~~~ 549 (564)
.....+..++.|||||.|++++|++|||+ +||||.|||||||++|||.|||+.|+|.+++.
T Consensus 532 ~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 532 DTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp EEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred ccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 01134566788999999999999999998 79999999999999999999999999987644
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1e-74 Score=612.40 Aligned_cols=422 Identities=21% Similarity=0.280 Sum_probs=304.9
Q ss_pred CceEEEEEEEEEEEeecCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCcccc
Q 008484 30 AAIKKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQC 109 (564)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~ 109 (564)
...+.|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.+ ++||++ ||
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~p---~~ 89 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPG--EVDGGP---QG 89 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCH--HHHCCT---TC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCc--ccCCCC---cC
Confidence 3457899999999999999999999999999999999999999999999999999999999999976 499986 89
Q ss_pred ccCCCCeEEEEEEeCCCCcceeEecchhh----hh-cceeeeEEEeCCCCCCCCCCC--CCCcEEEEeecccccCHHHHH
Q 008484 110 PIKTGNSYTYDFNVTGQRGTLWWHAHIFW----LR-ATVYGAIVIMPKPGSPFPFPQ--PNREEVILLGEWWHTDVEEVE 182 (564)
Q Consensus 110 ~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~----~~-~Gl~G~iiV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 182 (564)
+|.||++++|+|++++++||||||||.++ |. .||+|+|||+++.+...+++. ..+|++++++||+++...++.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 99999999999999555899999999854 44 899999999988654443432 246899999999986543221
Q ss_pred Hhhh-ccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEE-cCceeEEEeeCCCcc-c
Q 008484 183 KQGQ-KMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAI-AGHNFTVVEVDAVYT-K 259 (564)
Q Consensus 183 ~~~~-~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l-~gh~~~via~DG~~~-~ 259 (564)
.... ........++.++|||+.+ +.+.+ +|++|||||||+++.+.+.|+| +||+|+||++||+++ +
T Consensus 170 ~~~~~~~~~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~ 238 (488)
T 3od3_A 170 YQLDVMTAAVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPE 238 (488)
T ss_dssp CCCSHHHHHHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEE
T ss_pred ccccccccccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccC
Confidence 1000 0001124568999999986 45555 5789999999999999999999 699999999999987 8
Q ss_pred ceEecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCC---CCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhh
Q 008484 260 PFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAP---IPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFAL 336 (564)
Q Consensus 260 p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 336 (564)
|+.++++.|+|||||||+|++++ .+.|.|.+....... ..++. ...+++...........+ |.
T Consensus 239 P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~---P~-------- 304 (488)
T 3od3_A 239 PVKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDK--PHPVMRIQPIAISASGAL---PD-------- 304 (488)
T ss_dssp EEEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTTS--CEEEEEEEEEEEECCCCC---CS--------
T ss_pred ccEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccccC--ccceeEecccccCCCCCC---Cc--------
Confidence 99999999999999999999998 589999876433211 11222 222333221110000001 11
Q ss_pred hhhhhcccCCCCCCCCCCCcCcceEEEEEEccC----------------CCCCC---------------cccCCcee---
Q 008484 337 NYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFG----------------KDSCP---------------TCVNGTRL--- 382 (564)
Q Consensus 337 ~~~~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~----------------~~~~~---------------~~~~g~~~--- 382 (564)
.|..+ +..+ .++...++++.+..... ....+ ....|..+
T Consensus 305 ----~L~~~--~~~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 377 (488)
T 3od3_A 305 ----TLSSL--PALP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFH 377 (488)
T ss_dssp ----CCCCC--CCCC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGG
T ss_pred ----ccccC--CCCc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCcccccccccccccc
Confidence 01110 0001 11112345555543100 00000 00011111
Q ss_pred -eeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCC
Q 008484 383 -LATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLT 461 (564)
Q Consensus 383 -~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~ 461 (564)
.|.+||++|... ...+.++.|++|+|.|.|.+ +
T Consensus 378 ~~~~ING~~~~~~--------------------------------------------~~~~~~~~G~~e~w~l~N~~--~ 411 (488)
T 3od3_A 378 HANKINGQAFDMN--------------------------------------------KPMFAAAKGQYERWVISGVG--D 411 (488)
T ss_dssp GCEEETTBCCCTT--------------------------------------------CCSEECCBSSCEEEEEECTT--C
T ss_pred ceeeECCeeCCCC--------------------------------------------CCceEcCCCCEEEEEEEeCC--C
Confidence 256776654211 22356789999999999965 3
Q ss_pred CCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec----CceeeEEEeechhchhcc
Q 008484 462 VESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD----NPGVWFMHCHLELHTGWG 537 (564)
Q Consensus 462 ~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad----npG~wl~HCHil~H~d~G 537 (564)
.+.|||||||++|+|++++... .....+.|||||.|+ ++++.|+|+++ +||.|||||||++|||.|
T Consensus 412 ~~~Hp~HlHg~~F~Vl~~~g~~---------~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~G 481 (488)
T 3od3_A 412 MMLHPFHIHGTQFRILSENGKP---------PAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTG 481 (488)
T ss_dssp CCCEEEEETTCCBEEEEBTTBC---------CCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTT
T ss_pred CCCccEEEcCceEEEeccCCCc---------cccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcC
Confidence 5799999999999999985221 122346799999999 99999999974 578999999999999999
Q ss_pred cEEEEEE
Q 008484 538 LKTAFAV 544 (564)
Q Consensus 538 M~~~~~V 544 (564)
||+.|+|
T Consensus 482 Mm~~f~V 488 (488)
T 3od3_A 482 MMLGFTV 488 (488)
T ss_dssp CEEEEEC
T ss_pred CcEEEEC
Confidence 9999976
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=1.5e-72 Score=610.52 Aligned_cols=437 Identities=19% Similarity=0.240 Sum_probs=310.9
Q ss_pred CceEEEEEEEEEEEeec--CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCC-----------------------
Q 008484 30 AAIKKYQFDVQVKNVSR--LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN----------------------- 84 (564)
Q Consensus 30 ~~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~----------------------- 84 (564)
...++|+|++++..+.. ++..+.+|+|||++|||+|+|++||+|+|+++|+|++.
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 44688999999998774 45689999999999999999999999999999999853
Q ss_pred ------------------ceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecchhh----hh-c
Q 008484 85 ------------------MSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFW----LR-A 141 (564)
Q Consensus 85 ------------------~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~----~~-~ 141 (564)
|++||||+++.+. +||++ ||+|.||++++|+|++.+++||||||||.++ |. +
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999999876 89985 8999999999999998557999999999976 44 8
Q ss_pred ceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHH-HHH-hh------hc----cCC----CCCCCceEEEcCcCC
Q 008484 142 TVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEE-VEK-QG------QK----MGL----PPNMSDAHTINGKPG 205 (564)
Q Consensus 142 Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-~~~-~~------~~----~g~----~~~~~~~~~iNG~~~ 205 (564)
||+|+|||+++.+...+++.+++|++|+++||+++.... .+. .. .. .+. .+..++.++|||+.+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999987655556667999999999999864321 000 00 00 111 124679999999987
Q ss_pred CCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCc-------eeEEEeeCCCcc-cceEec------EEEECCC
Q 008484 206 PLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGH-------NFTVVEVDAVYT-KPFTTE------AILIAPG 271 (564)
Q Consensus 206 ~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh-------~~~via~DG~~~-~p~~~d------~v~l~pg 271 (564)
+.++|++| +|||||||+++.+.+.|+|++| +|+|||+||+++ +|+.++ +|.|+||
T Consensus 265 ----------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pg 333 (612)
T 2g23_A 265 ----------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCc
Confidence 68999999 9999999999999999999999 899999999999 699999 9999999
Q ss_pred ceEEEEEEeCCCCc-eeEEEEeecCCCCCCC---CCCceEEEEEEccCCC--CCCCCCCCCCCCCChhhhhhhhhhcccC
Q 008484 272 QTTNVLVQANQKPG-RYFMAARPFNDAPIPV---DNKTATGILQYKGIPN--SLLPTLAQLPASNDSEFALNYNKKLRSL 345 (564)
Q Consensus 272 ~r~dv~v~~~~~pg-~y~l~~~~~~~~~~~~---~~~~~~ail~y~~~~~--~~~~~~p~~p~~~~~~~~~~~~~~~~~l 345 (564)
|||||+|++++.+| +|.|+........... .......++++.-... .....+ |.. |...
T Consensus 334 eR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~---P~~------------L~~~ 398 (612)
T 2g23_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFAL---PEV------------LSGS 398 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCC---CSS------------CCSS
T ss_pred CeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCC---Chh------------hccc
Confidence 99999999998666 5888765321111000 0111123454442211 111111 110 1000
Q ss_pred CCCCCCCCCCcCcceEEEEEE--ccCCCCCC------------------------cccCCceeeeeecceeeecCcchhh
Q 008484 346 NSPKFPADVPQKVDRKLFYTI--GFGKDSCP------------------------TCVNGTRLLATLNNISFVMPQTALL 399 (564)
Q Consensus 346 ~~~~~p~~~p~~~d~~~~~~~--~~~~~~~~------------------------~~~~g~~~~~~~n~~s~~~p~~~~l 399 (564)
.+..+..++. ..+.+.+.- ..+....+ ...+|....|++|++.|
T Consensus 399 -~~~l~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~-------- 468 (612)
T 2g23_A 399 -FRRMSHDIPH-GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATF-------- 468 (612)
T ss_dssp -CCCCCTTSCC-EEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECST--------
T ss_pred -cccCCccccc-ceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccC--------
Confidence 0000001111 011111100 00000000 00011112233333221
Q ss_pred hhhhccccccccCCCCCCCCCCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEee
Q 008484 400 QAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGT 479 (564)
Q Consensus 400 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~ 479 (564)
.....+.++.|++|+|+|.|.+ .+.|||||||+.|+|+++
T Consensus 469 -------------------------------------~~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~r 508 (612)
T 2g23_A 469 -------------------------------------NDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGR 508 (612)
T ss_dssp -------------------------------------TSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEEE
T ss_pred -------------------------------------CCCCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEecc
Confidence 1234567899999999999975 789999999999999997
Q ss_pred cCCCC---CCCCCC------------CCCCCCCCCcceeeEecCCCEEEEEEEec-CceeeEEEeechhchhcccEEEEE
Q 008484 480 GIGNF---DPVKYP------------ANYNLVDPIERNTAAVPTGGWTAIRFRAD-NPGVWFMHCHLELHTGWGLKTAFA 543 (564)
Q Consensus 480 g~g~~---~~~~~~------------~~~~~~~p~~rDTv~vp~~g~~~irf~ad-npG~wl~HCHil~H~d~GM~~~~~ 543 (564)
+...+ +..... ...+..++.|||||.|+|+++++|+|+++ |||.|||||||++|+|.|||+.|+
T Consensus 509 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~ 588 (612)
T 2g23_A 509 DAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFV 588 (612)
T ss_dssp EEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEE
T ss_pred cCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEE
Confidence 53221 111000 12345567799999999999999999999 999999999999999999999999
Q ss_pred EecC
Q 008484 544 VEDG 547 (564)
Q Consensus 544 V~~~ 547 (564)
|.+.
T Consensus 589 V~p~ 592 (612)
T 2g23_A 589 VMPP 592 (612)
T ss_dssp EECH
T ss_pred ECch
Confidence 9753
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=5.9e-53 Score=426.29 Aligned_cols=271 Identities=25% Similarity=0.451 Sum_probs=227.2
Q ss_pred ceEEEEEEEEEEEeec-CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCcccc
Q 008484 31 AIKKYQFDVQVKNVSR-LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQC 109 (564)
Q Consensus 31 ~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~ 109 (564)
.+++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+.+....++||+++++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4789999999999987 588899999999999999999999999999999999999999999999987789999999999
Q ss_pred ccCCCCeEEEEEEeCCCCcceeEecchhhhh----cceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHHHHHhh
Q 008484 110 PIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR----ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEEVEKQG 185 (564)
Q Consensus 110 ~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~----~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 185 (564)
+|+||++++|+|++ +++||||||||.+.+. .||+|+|||++++....+. ..++|++|+++||+..... ..
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~----~~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWAN----KP 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTT----CT
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccc----cc
Confidence 99999999999998 7899999999997654 6999999999876432111 3588999999999875321 11
Q ss_pred hccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcc-cceEec
Q 008484 186 QKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-KPFTTE 264 (564)
Q Consensus 186 ~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d 264 (564)
...+.....+++++|||+.++ ....+++++|++|||||+|++.. .+.||||||.|+||+.||.++ +|..+|
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~-------~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~d 226 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFP-------ETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGD 226 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBT-------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEES
T ss_pred ccCCCCCCcCcEEEEcCcCCC-------CCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCcccc
Confidence 112222235689999999863 23469999999999999999965 689999999999999999988 799999
Q ss_pred EEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCC-CCCCceEEEEEEccCC
Q 008484 265 AILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIP-VDNKTATGILQYKGIP 316 (564)
Q Consensus 265 ~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~-~~~~~~~ail~y~~~~ 316 (564)
++.|.||||++|++++++ ||.|++|||.......+ .......++|+|++..
T Consensus 227 tv~l~pger~~v~~~a~~-pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMDN-PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECCS-CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECCC-CeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999998 79999999965332110 1123457899998743
No 19
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.3e-52 Score=482.83 Aligned_cols=270 Identities=20% Similarity=0.258 Sum_probs=207.1
Q ss_pred CcccCceEEEEEEEEEEEeecC--Cc--------------------------eeeEE-------EECCc--------CCC
Q 008484 26 FPAEAAIKKYQFDVQVKNVSRL--CH--------------------------AKPIV-------TVNGR--------FPG 62 (564)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~--g~--------------------------~~~~~-------~~Ng~--------~pg 62 (564)
..+.+++|+|.+.|.+..|+.. +. .+.+. +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 3446889999999999987753 22 12223 57877 999
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCC----CCCCCCCCCC--ccccccCCCCeEEEEEEeCCC---------C
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQY----RNGWADGPAY--ITQCPIKTGNSYTYDFNVTGQ---------R 127 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~----~~~~~DGv~~--~~~~~i~PG~~~~y~~~~~~~---------~ 127 (564)
|+||+++||+|+|+|+|.|+++++|||||++++ +.+|+||+++ ++||+|+||++++|+|++.++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999987 4467888888 899999999999999999443 4
Q ss_pred cceeEecchhhhh---cceeeeEEEeCCCCCCCCCC-CCCCcEEEEee------cccccCHHHHHH-hhhccC-CC---C
Q 008484 128 GTLWWHAHIFWLR---ATVYGAIVIMPKPGSPFPFP-QPNREEVILLG------EWWHTDVEEVEK-QGQKMG-LP---P 192 (564)
Q Consensus 128 Gt~wYH~h~~~~~---~Gl~G~iiV~~~~~~~~~~~-~~~~e~~l~~~------d~~~~~~~~~~~-~~~~~g-~~---~ 192 (564)
||||||||.+.++ +||+|+|||++++....+.+ ..|+|++|+++ ||+..+....+. ...... .. .
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~~ 254 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQ 254 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhhcCcccccccccccc
Confidence 9999999999875 89999999999876443322 35889999999 566543221110 000000 00 0
Q ss_pred CCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCC-CeEEEEEcCceeEEEeeCCCcccceEecEEEECCC
Q 008484 193 NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPG 271 (564)
Q Consensus 193 ~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg 271 (564)
..++.++|||+.+ ...+.+++++|++|||||+|++.. ..+.||||||+|++ +|+.+|++.|.||
T Consensus 255 ~~~~~~~iNG~~~-------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I~pG 319 (1065)
T 2j5w_A 255 QSNRMYSVNGYTF-------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLFPA 319 (1065)
T ss_dssp HHTEEEEETTEET-------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEECBT
T ss_pred ccCcEEEECCccC-------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEECCC
Confidence 0235799999974 124689999999999999999976 58899999999992 5789999999999
Q ss_pred ceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCC
Q 008484 272 QTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIP 316 (564)
Q Consensus 272 ~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 316 (564)
||+||+|++++ ||.|+|+||..... ..+..+.+++.+..
T Consensus 320 er~dVlv~~~~-pG~y~i~~h~~~h~-----~~Gm~~~~~V~~~~ 358 (1065)
T 2j5w_A 320 TLFDAYMVAQN-PGEWMLSCQNLNHL-----KAGLQAFFQVQECN 358 (1065)
T ss_dssp CEEEEEEECCS-CEEEEEEECSHHHH-----HTTCEEEEEEECSC
T ss_pred cEEEEEEEeCC-CeeEEEEecCcchh-----hCCCEEEEEEecCC
Confidence 99999999999 79999999964321 12356778887543
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1.8e-51 Score=420.03 Aligned_cols=271 Identities=27% Similarity=0.541 Sum_probs=225.7
Q ss_pred ceEEEEEEEEEEEeecC-CceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCcccc
Q 008484 31 AIKKYQFDVQVKNVSRL-CHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQC 109 (564)
Q Consensus 31 ~~~~~~l~~~~~~~~~~-g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~ 109 (564)
.+++|+|++++..++++ |..+.+|+|||++|||+|+|++||+|+|+|+|.+..+++|||||+++.+.+|+||+++++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 46899999999999985 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEEeCCCCcceeEecchhh--hh--cceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHHHHHhh
Q 008484 110 PIKTGNSYTYDFNVTGQRGTLWWHAHIFW--LR--ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEEVEKQG 185 (564)
Q Consensus 110 ~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~--~~--~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 185 (564)
+|+||++++|+|++ .++||||||||... +. .||+|+|||+++.....+ ...++|++++++||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc----c
Confidence 99999999999998 78999999999875 32 799999999987653211 134789999999998632110 0
Q ss_pred hccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcc-cceEec
Q 008484 186 QKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-KPFTTE 264 (564)
Q Consensus 186 ~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d 264 (564)
...+.....++.++|||+.++ ....+++++|++|||||+|++. ..+.||||||+|+||+.||.++ .|..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~-------~~~~~~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP-------LTQPLRVKKGDVVKIRFFGAGG-GIHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT-------SSCCEEECTTCEEEEEEEECSS-SCEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCC-------CcccEEECCCCEEEEEEEeCCC-ceEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 011112224689999999763 2246899999999999999994 5889999999999999999988 488999
Q ss_pred EEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCC-CCCCceEEEEEEccCC
Q 008484 265 AILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIP-VDNKTATGILQYKGIP 316 (564)
Q Consensus 265 ~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~-~~~~~~~ail~y~~~~ 316 (564)
++.|.||||++|+|++++ ||.|++|||....+... .......++++|++..
T Consensus 228 tv~l~pg~r~~v~~~~~~-pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEECTTCEEEEEEECCS-CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEECCCCEEEEEEEeCC-CeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 999999999999999998 79999999965432111 1223457999998754
No 21
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.9e-53 Score=471.56 Aligned_cols=241 Identities=17% Similarity=0.204 Sum_probs=182.4
Q ss_pred EEEEEEEEEEEeecC-CceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCC------
Q 008484 33 KKYQFDVQVKNVSRL-CHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAY------ 105 (564)
Q Consensus 33 ~~~~l~~~~~~~~~~-g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~------ 105 (564)
-...+++++...+.. |..+..|+ ++|||+|||++||+|+|+|+|.++++++|||||+++... +||++.
T Consensus 47 y~k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~ 121 (742)
T 2r7e_A 47 YKKTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQ 121 (742)
T ss_dssp EECCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCS
T ss_pred EEEEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCcc
Confidence 333555555555543 55555553 899999999999999999999999999999999998653 566554
Q ss_pred --ccccccCCCCeEEEEEEeCC---------CCcceeEecchhhh--h-cceeeeEEEeCCCCCCCCCCCCCCcEEEEee
Q 008484 106 --ITQCPIKTGNSYTYDFNVTG---------QRGTLWWHAHIFWL--R-ATVYGAIVIMPKPGSPFPFPQPNREEVILLG 171 (564)
Q Consensus 106 --~~~~~i~PG~~~~y~~~~~~---------~~Gt~wYH~h~~~~--~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~ 171 (564)
++||+|+||++++|+|++++ ++||||||||.+.+ . +||+|+|||+++.....+.....+|++++++
T Consensus 122 ~~vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~ 201 (742)
T 2r7e_A 122 REKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFA 201 (742)
T ss_dssp SSSSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEE
T ss_pred cccccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEee
Confidence 88999999999999999832 46999999999874 3 8999999999986543322222478887765
Q ss_pred c------ccccCHHHHHHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCC-eEEEEEc
Q 008484 172 E------WWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALND-ELFFAIA 244 (564)
Q Consensus 172 d------~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~-~~~~~l~ 244 (564)
+ |+............ ........+.++|||+.+ | ..+.+++++|++|||||+|+++.. .|.||||
T Consensus 202 ~~de~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~ING~~~----~---~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlh 273 (742)
T 2r7e_A 202 VFDEGKSWHSETKNSLMQDRD-AASARAWPKMHTVNGYVN----R---SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLE 273 (742)
T ss_dssp CCCCSSSSCCCCCC--------CCSCCCCCCCCEETTBCT----B---CCCCCEECSSSCEEEECCCCCSSSCCCCCCCT
T ss_pred cccCCccccccccccccccCC-CccccccCceEEECCccC----C---CCcceEEcCCCEEEEEEEeCCCCCcceEEEEC
Confidence 3 55443221111100 111122357789999974 1 346789999999999999999765 7899999
Q ss_pred CceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCCCCceeEEEEeecC
Q 008484 245 GHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFN 295 (564)
Q Consensus 245 gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~ 295 (564)
||.|+|++ ..+|++.|.||++++|++++++ ||.|++|||...
T Consensus 274 Gh~f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~~-pG~w~~hCH~~~ 315 (742)
T 2r7e_A 274 GHTFLVRN--------HRQASLEISPITFLTAQTLLMD-LGQFLLFCHISS 315 (742)
T ss_dssp TCCCEETT--------EECCSCCCCTTCCCEEEECCCS-CSEECCCCCSSS
T ss_pred CCEEEEEe--------EecceEEeCCCcEEEEEEEeCC-CeeEEEEeCChh
Confidence 99999984 3478999999999999999998 799999999653
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.2e-48 Score=415.99 Aligned_cols=400 Identities=17% Similarity=0.150 Sum_probs=255.6
Q ss_pred CceEEEEEEEEEEEeecCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCcccc
Q 008484 30 AAIKKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQC 109 (564)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~ 109 (564)
+.++++.++++...+..+| .+++|||++ +|+|+|++||+|+|+|+|.+...+++||||... .++|
T Consensus 26 ~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~~~ 90 (447)
T 2dv6_A 26 PVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RSAI 90 (447)
T ss_dssp CEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------ECCC
T ss_pred CceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------ccce
Confidence 4455565565544455444 456999999 899999999999999999998889999998642 2469
Q ss_pred ccCCCCeEEEEEEeCCCCcceeEecchhhhh-cceeeeEEEeCCCCCCCCCC-----CCCCcEEEEeecccccCHHHH-H
Q 008484 110 PIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR-ATVYGAIVIMPKPGSPFPFP-----QPNREEVILLGEWWHTDVEEV-E 182 (564)
Q Consensus 110 ~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~-----~~~~e~~l~~~d~~~~~~~~~-~ 182 (564)
+|+||++++|.|++ .++||||||||..+++ +||+|.|+|+++....+... ....+++..+ |+........ +
T Consensus 91 ~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l 168 (447)
T 2dv6_A 91 VNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDL 168 (447)
T ss_dssp BCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEE
T ss_pred ecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEE
Confidence 99999999999998 6799999999998777 79999999998765322100 0000000000 1000000000 0
Q ss_pred H-hhhccCC-CCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCC-CCeEEEEEcCceeEEEeeCCCccc
Q 008484 183 K-QGQKMGL-PPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAAL-NDELFFAIAGHNFTVVEVDAVYTK 259 (564)
Q Consensus 183 ~-~~~~~g~-~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~-~~~~~~~l~gh~~~via~DG~~~~ 259 (564)
. ....... .....+.++|||+. ..|.+++++|++||||++|.+. ...+++|+||. ++.||..
T Consensus 169 ~~~~~~~~~~~g~~~~~~~~NG~~---------pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~-- 233 (447)
T 2dv6_A 169 ETVEVKGQLDDNTTYTYWTFNGKV---------PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA-- 233 (447)
T ss_dssp EEEEEEEEEETTEEEEEEEETTBB---------SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG--
T ss_pred EEEEEEEeccCCceeEEEEECCcc---------CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC--
Confidence 0 0000000 11223678999985 1278999999999999999985 35677888884 3679872
Q ss_pred ceEecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhh
Q 008484 260 PFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYN 339 (564)
Q Consensus 260 p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~ 339 (564)
+++.|.||||+++.|++++ +|+||+|||...... . ...+..+.+.+.+... .|..+.. ...
T Consensus 234 ----~~~~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~-~-~~~Gl~g~l~v~~~~~--------~P~~d~~-~~~--- 294 (447)
T 2dv6_A 234 ----AFTQTDPGEETVVTFKALI-PGIYVYHCATPSVPT-H-ITNGMYGLLLVEPEGG--------LPQVDRE-FYV--- 294 (447)
T ss_dssp ----GGCCBCTTCEEEEEEECCS-CEEEEEECCSSSHHH-H-HHTTCEEEEEEECTTC--------SCCCSEE-EEE---
T ss_pred ----ccEEeCCCCEEEEEEECCC-CeEEEEEeCCCChHH-H-HhCCCEEEEEEeCCCC--------CCCCCee-EEE---
Confidence 3456999999999999998 699999998521000 0 0122355666654211 1111100 000
Q ss_pred hhcccCCCCCCCCCCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCC
Q 008484 340 KKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPP 419 (564)
Q Consensus 340 ~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~ 419 (564)
.+.+..... .. ...... .+.... ........|.+||+++..
T Consensus 295 -~~~~~~~~~---~~--~~~g~~--~~~~~~-----~~~~~~~~~~iNG~~~~~-------------------------- 335 (447)
T 2dv6_A 295 -MQGEIYTVK---SF--GTSGEQ--EMDYEK-----LINEKPEYFLFNGSVGSL-------------------------- 335 (447)
T ss_dssp -EEEEECBSS---CT--TCCEEC--CBBHHH-----HHTTCCSEEEETTSTTCC--------------------------
T ss_pred -EecccccCC---cc--cccccc--cCChHH-----hhccCCCEEEECCcccCC--------------------------
Confidence 000000000 00 000000 000000 000001123344432100
Q ss_pred CCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCC
Q 008484 420 KPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPI 499 (564)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~ 499 (564)
.....+.++.|++++|+|.|.+ ....||||||||+|+||+.+.+. +..|.
T Consensus 336 -----------------~~~~~~~v~~g~~vrlrliN~~--~~~~h~~hlhGh~f~vv~~dG~~-----------~~~p~ 385 (447)
T 2dv6_A 336 -----------------TRSHPLYASVGETVRIFFGVGG--PNFTSSFHVIGEIFDHVYSLGSV-----------VSPPL 385 (447)
T ss_dssp -----------------CCCCCEEECTTCEEEEEEEEEE--SSCCEEEEEETCCEEEECGGGCS-----------SSCCE
T ss_pred -----------------CCCcceEECCCCEEEEEEEeCC--CCceEeEEEcCcEEEEEEcCCcc-----------cCCCc
Confidence 0124578899999999999975 35789999999999999985221 22344
Q ss_pred -cceeeEecCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEecCCC
Q 008484 500 -ERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 549 (564)
Q Consensus 500 -~rDTv~vp~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~~~ 549 (564)
+|||+.|++++++.|+|+++|||.|+||||+++|++.||+++|.|..+..
T Consensus 386 ~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 386 IGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred ccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 79999999999999999999999999999999999999999999976554
No 23
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=2e-47 Score=381.36 Aligned_cols=237 Identities=25% Similarity=0.405 Sum_probs=206.2
Q ss_pred cCceEEEEEEEEEEEeec-CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCcc
Q 008484 29 EAAIKKYQFDVQVKNVSR-LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYIT 107 (564)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~ 107 (564)
...++.|+|++++..+.. +|..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||++. .++||+++++
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~ 107 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTST
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCcc
Confidence 556789999999998886 499999999999999999999999999999999999999999999973 4699999999
Q ss_pred ccccCCCCeEEEEEEeCCCCcceeEecchhh---hh-cceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHHHHH
Q 008484 108 QCPIKTGNSYTYDFNVTGQRGTLWWHAHIFW---LR-ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEEVEK 183 (564)
Q Consensus 108 ~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~---~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~ 183 (564)
|++|+||++++|+|++ +++||||||||.+. +. +||+|+|||+++...+ ..++|++|+++||+..+
T Consensus 108 ~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~------ 176 (288)
T 3gdc_A 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG------ 176 (288)
T ss_dssp TCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS------
T ss_pred ceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC------
Confidence 9999999999999998 88999999999974 33 8999999999887532 34799999999998762
Q ss_pred hhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCC-eEEEEEcCceeEEEeeCCCcccceE
Q 008484 184 QGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALND-ELFFAIAGHNFTVVEVDAVYTKPFT 262 (564)
Q Consensus 184 ~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~-~~~~~l~gh~~~via~DG~~~~p~~ 262 (564)
+ ..++.++|||+.+++ ....+++++|++|||||+|++... .|+||||||.|+|++.++....|..
T Consensus 177 -----g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~ 242 (288)
T 3gdc_A 177 -----G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEY 242 (288)
T ss_dssp -----T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEE
T ss_pred -----C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCce
Confidence 1 135889999997621 124689999999999999999554 7899999999999984443336789
Q ss_pred ecEEEECCCceEEEEEEeCCCCceeEEEEeec
Q 008484 263 TEAILIAPGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 263 ~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
+|++.|.||||++|++++++ ||.|.+|||..
T Consensus 243 ~Dtv~v~pg~~~~v~~~~~~-pG~~~~hCH~~ 273 (288)
T 3gdc_A 243 TDTISQVQGQRGILELRFPY-PGKFMFHAHKT 273 (288)
T ss_dssp ESEEEEETTCEEEEEECCCS-CEEEEEECSSH
T ss_pred eeEEEeCCCceEEEEEECCC-CEEEEEEecCh
Confidence 99999999999999999998 79999999853
No 24
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=9.2e-48 Score=390.69 Aligned_cols=266 Identities=23% Similarity=0.301 Sum_probs=218.5
Q ss_pred cCceEEEEEEEEEEEeec-CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCC--CCceeeeCCCCCCCCCCCCCCCC
Q 008484 29 EAAIKKYQFDVQVKNVSR-LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ--YNMSIHWHGLKQYRNGWADGPAY 105 (564)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~~ 105 (564)
.+++++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.+. .++++||||+.. +||++.
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~~ 109 (327)
T 1kbv_A 35 YPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGAA 109 (327)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGTT
T ss_pred CCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCCc
Confidence 567889999999999998 799999999999999999999999999999999986 589999999863 788765
Q ss_pred ccccccCCCCeEEEEEEeCCCCcceeEecchh---hhh-cceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHHH
Q 008484 106 ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIF---WLR-ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEEV 181 (564)
Q Consensus 106 ~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~---~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 181 (564)
. ..|.||++++|+|++ +++||||||||.+ .+. .||+|+|||++++. .+.+|+|++++++||++......
T Consensus 110 ~--~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 110 A--TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp T--TCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTC
T ss_pred c--eeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCcccc
Confidence 3 359999999999998 7899999999974 333 89999999998753 22468999999999998652100
Q ss_pred HH--hhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCccc
Q 008484 182 EK--QGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK 259 (564)
Q Consensus 182 ~~--~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~ 259 (564)
.. .+.........++.++|||+.++..+ .+.+++++||+|||||+|++....+.|||+||+|+||+.||.+++
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~ 257 (327)
T 1kbv_A 183 QGLQPFDMDKAVAEQPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLI 257 (327)
T ss_dssp CEEECBCHHHHHHTCCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCE
T ss_pred ccccccChhHhccCCCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCC
Confidence 00 00000000124589999999875321 257999999999999999998889999999999999999999999
Q ss_pred ceEecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCC
Q 008484 260 PFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIP 316 (564)
Q Consensus 260 p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 316 (564)
|..++++.|.||||+||+|++++ ||.|+|+||....+ .+....++++|++..
T Consensus 258 p~~~d~l~l~pGer~dv~v~~~~-pG~y~l~~h~~~~~----~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 258 NENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRA----FNKGALGQLKVEGAE 309 (327)
T ss_dssp ECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHH----HHSSCEEEEEEESCC
T ss_pred CCceeEEEECCCCEEEEEEEeCC-CeEEEEEecccccc----ccCCcEEEEEECCCC
Confidence 99999999999999999999998 79999999964321 123468999998754
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=8.9e-46 Score=427.89 Aligned_cols=399 Identities=15% Similarity=0.145 Sum_probs=265.0
Q ss_pred ceeeEEEECCcCCC--CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCC-CCCCCCCCCccccccCCCCeEEEEEEeCC
Q 008484 49 HAKPIVTVNGRFPG--PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYR-NGWADGPAYITQCPIKTGNSYTYDFNVTG 125 (564)
Q Consensus 49 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~-~~~~DGv~~~~~~~i~PG~~~~y~~~~~~ 125 (564)
..+.+.++||++|| |+|++++||+|+|+|.|. .+.+||||+++.+ +.|+||++.++ |+|.||.+++|.|++ .
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 46789999999999 889999999999999975 4569999999998 88999999998 999999999999998 7
Q ss_pred CCcceeEecchhhhh-cceeeeEEEeCCCCCCCCCCCCCCcEEEEe----ecccccCHHHHHHhhh-ccCCCCCCCceEE
Q 008484 126 QRGTLWWHAHIFWLR-ATVYGAIVIMPKPGSPFPFPQPNREEVILL----GEWWHTDVEEVEKQGQ-KMGLPPNMSDAHT 199 (564)
Q Consensus 126 ~~Gt~wYH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 199 (564)
++||||||||...++ +||.|.++|++......+...++.|.++.+ .||++........+.. ..+.. +..++
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999999988 999999999987654444446788888888 8999877655433221 11111 23333
Q ss_pred EcCcCCC----------------CCCC----------CCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEee
Q 008484 200 INGKPGP----------------LFPC----------SEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEV 253 (564)
Q Consensus 200 iNG~~~~----------------~~~~----------~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~ 253 (564)
+|+.... .+.. ..-..|.|++++|+++++|+.|.. ...+++|.||.. +...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~-~~~~sih~HGl~--~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQ--TESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECS-SSCBCCEESSCB--CSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCC-CCCceEeecccc--ccCC
Confidence 3332110 0100 012348999999999999999996 566668888744 3222
Q ss_pred CCCcccceEecEEEECCCceEEEEEEeCCC---------CceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCC
Q 008484 254 DAVYTKPFTTEAILIAPGQTTNVLVQANQK---------PGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLA 324 (564)
Q Consensus 254 DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~---------pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p 324 (564)
| ...+.||++++..+.+.+. +|.||+|++...... ...++ .+.|.+..... +
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q-~~~GL--~G~liV~~~~~-----l- 905 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKD-LYSGL--IGPLIVCRRPY-----L- 905 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHH-HHTTC--EEEEEEECCC--------
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHh-hhccc--cceeEecCccc-----c-
Confidence 2 1256799998888887652 259999998421000 01122 23233322110 0
Q ss_pred CCCCCCChhhhhhhhhhcccCCCCCCCCCCCcCcceEEEEEEccCCCCCCcccCCceeeeeecceeeec-C-cchhhhhh
Q 008484 325 QLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVM-P-QTALLQAH 402 (564)
Q Consensus 325 ~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~-p-~~~~l~~~ 402 (564)
. . ...+...|..+.+.. +.. ++ .+....|+.+|.. | .++++...
T Consensus 906 --~-----------------~------~~~~~d~D~~l~~~~-~d~-------~~-~~y~~~n~~~~~~~P~~v~~~~~~ 951 (1065)
T 2j5w_A 906 --K-----------------V------FNPRRKLEFALLFLV-FDE-------NE-SWYLDDNIKTYSDHPEKVNKDDEE 951 (1065)
T ss_dssp ----------------------------CCCCEEEEEEEEEE-EEG-------GG-STTHHHHHHHHCSCGGGCCTTCHH
T ss_pred --c-----------------c------cCCCcceEEEEEEEe-ecC-------Cc-ceeeccCcccccCCccccCcchhh
Confidence 0 0 001111222222211 111 00 0001122223321 1 11111110
Q ss_pred hccccccccCCCCCCCCCCCCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCC
Q 008484 403 YFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIG 482 (564)
Q Consensus 403 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g 482 (564)
+.. .+..+..+|. .......+.++.|++|+|+|.|.+. ..+.||||||||.|+|++.+
T Consensus 952 ~~~------------~~~~~~iNG~-------~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~~F~vv~~~-- 1009 (1065)
T 2j5w_A 952 FIE------------SNKMHAINGR-------MFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHRG-- 1009 (1065)
T ss_dssp HHH------------HTEEEEETTB-------CTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEESSCCEEETTTT--
T ss_pred hhc------------cCceEEECCc-------cCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEcccEEEEEecC--
Confidence 000 0001111221 1112456789999999999999752 25789999999999999753
Q ss_pred CCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEecCC
Q 008484 483 NFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 548 (564)
Q Consensus 483 ~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~~ 548 (564)
|.+||||.|+|+++++|+|++||||.|+||||+++|++.|||++|.|.+..
T Consensus 1010 ---------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1010 ---------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp ---------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred ---------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 679999999999999999999999999999999999999999999998654
No 26
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=2.1e-44 Score=357.29 Aligned_cols=224 Identities=20% Similarity=0.312 Sum_probs=191.3
Q ss_pred cccCceEEEEEEEEEEEeecCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCc
Q 008484 27 PAEAAIKKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYI 106 (564)
Q Consensus 27 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 106 (564)
++.+.+|+|+|++++.. .+...+.++++||++|||+|||++||+|+|+|+|.++.+++|||||+++.. ++||++ +
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~ 76 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-M 76 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-T
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-C
Confidence 45788999999999853 333445667899999999999999999999999999999999999999976 499999 8
Q ss_pred cccccCCCCeEEEEEEeCC------------CCcceeEecchhh------hh-cceeeeEEEeCCCCCCCCCCCCCCcEE
Q 008484 107 TQCPIKTGNSYTYDFNVTG------------QRGTLWWHAHIFW------LR-ATVYGAIVIMPKPGSPFPFPQPNREEV 167 (564)
Q Consensus 107 ~~~~i~PG~~~~y~~~~~~------------~~Gt~wYH~h~~~------~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~ 167 (564)
+||+|+||++++|+|++++ ++||||||||.++ +. +||+|+|||+++.... +|+|++
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~ 151 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHT 151 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceE
Confidence 9999999999999999943 3799999999964 33 8999999999987532 389999
Q ss_pred EEeecccccCHHHHHHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCce
Q 008484 168 ILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHN 247 (564)
Q Consensus 168 l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~ 247 (564)
+++++| +|||+.++ ..+.++++.|++|||||+|.+. ..++||||||.
T Consensus 152 l~l~~~-------------------------~iNG~~~~-------~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~ 198 (276)
T 3kw8_A 152 IVFNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHR 198 (276)
T ss_dssp EEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCC
T ss_pred EEeccc-------------------------ccceeccc-------CCCCEEEecCCEEEEEEecCCC-cceeEEEccce
Confidence 988653 89999752 4588999999999999999996 58899999999
Q ss_pred eEEEeeCCCcc----cceEecEEEECCCceEEEEEEeCC--CCceeEEEEeec
Q 008484 248 FTVVEVDAVYT----KPFTTEAILIAPGQTTNVLVQANQ--KPGRYFMAARPF 294 (564)
Q Consensus 248 ~~via~DG~~~----~p~~~d~v~l~pg~r~dv~v~~~~--~pg~y~l~~~~~ 294 (564)
|++++ ||... .+..+|++.|.||+++++.+++++ .||.|++|||..
T Consensus 199 f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~ 250 (276)
T 3kw8_A 199 WADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQ 250 (276)
T ss_dssp EESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred eEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCc
Confidence 99975 66543 246899999999999999999984 489999999953
No 27
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=8.2e-44 Score=377.72 Aligned_cols=268 Identities=22% Similarity=0.267 Sum_probs=219.5
Q ss_pred ccCceEEEEEEEEEEEeec-CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCC--CCceeeeCCCCCCCCCCCCCCC
Q 008484 28 AEAAIKKYQFDVQVKNVSR-LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ--YNMSIHWHGLKQYRNGWADGPA 104 (564)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~ 104 (564)
..+.+++|+|++++..++. +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||++
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 3678899999999999995 899999999999999999999999999999999986 599999999874 68876
Q ss_pred CccccccCCCCeEEEEEEeCCCCcceeEecchh---hhh-cceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHH
Q 008484 105 YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIF---WLR-ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEE 180 (564)
Q Consensus 105 ~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~---~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 180 (564)
..+ +|.||++++|+|++ +++||||||||.+ .+. .||+|+|||++++.. +.+|+|++++++||++.+...
T Consensus 99 ~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 99 ESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred ccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 543 69999999999998 7899999999753 344 899999999987542 246899999999999865311
Q ss_pred HH--HhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcc
Q 008484 181 VE--KQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT 258 (564)
Q Consensus 181 ~~--~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~ 258 (564)
.. ............+++++|||+.++.. ..+.+++++|++|||||+|++....+.|||+||+|+||+.||.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~ 246 (442)
T 2zoo_A 172 EAGLQPFDMAKAIDEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL 246 (442)
T ss_dssp CCEEECBCHHHHHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC
T ss_pred ccccccCChhHhccCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC
Confidence 00 00000000123568999999976321 125799999999999999999888999999999999999999999
Q ss_pred cceEecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCC
Q 008484 259 KPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPN 317 (564)
Q Consensus 259 ~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~ 317 (564)
+|..++++.|.||||+||+|++++ +|.|+++|+..... .+....++++|.+...
T Consensus 247 ~p~~~~~~~l~pg~r~~v~v~~~~-~G~y~~~~~~~~~~----~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 247 KNHNVQTTLIPAGGAAIVEFKVEV-PGTFILVDHSIFRA----FNKGALAMLKVEGPDD 300 (442)
T ss_dssp EECSBSEEEECTTEEEEEEEECCS-CEEEEEEESSTHHH----HTTSCEEEEEEESCCC
T ss_pred CCccceEEEECCCeeEEEEEEcCC-CCeEEEEecccccc----cccCceEEEEecCCCC
Confidence 999999999999999999999998 79999999865321 1245689999987553
No 28
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=4.9e-44 Score=360.80 Aligned_cols=225 Identities=20% Similarity=0.347 Sum_probs=190.7
Q ss_pred CcccCceEEEEEEEEEEEeecCCce-eeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCC
Q 008484 26 FPAEAAIKKYQFDVQVKNVSRLCHA-KPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPA 104 (564)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~g~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~ 104 (564)
.++.+.++.+.|.+++ -++|.. +.++..||++|||+|||++||+|+|+|+|.++.++||||||+++... +||++
T Consensus 7 ~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST
T ss_pred CCCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc
Confidence 3557788888887753 245643 45567899999999999999999999999999999999999998754 99997
Q ss_pred CccccccCCCCeEEEEEEeC------------CCCcceeEecchhhhh-------cceeeeEEEeCCCCCCCCCCCCCCc
Q 008484 105 YITQCPIKTGNSYTYDFNVT------------GQRGTLWWHAHIFWLR-------ATVYGAIVIMPKPGSPFPFPQPNRE 165 (564)
Q Consensus 105 ~~~~~~i~PG~~~~y~~~~~------------~~~Gt~wYH~h~~~~~-------~Gl~G~iiV~~~~~~~~~~~~~~~e 165 (564)
.+|++|+||++++|+|++. .++||||||||...+. +||+|+|||+++... .+|+|
T Consensus 82 -~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e 155 (313)
T 3tas_A 82 -QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRT 155 (313)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEE
T ss_pred -cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccccc
Confidence 5899999999999999862 3679999999986542 799999999988753 35899
Q ss_pred EEEEeecccccCHHHHHHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcC
Q 008484 166 EVILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAG 245 (564)
Q Consensus 166 ~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~g 245 (564)
++|+++|| ++||+..+ ..+.++++.|++|||||+|++ ...++|||||
T Consensus 156 ~~l~~~d~-------------------------t~Ng~~~~-------~~~~l~v~~Ge~vr~~liN~g-~~~hpfHlHG 202 (313)
T 3tas_A 156 HTIVFNDM-------------------------TINNRPAH-------TGPDFEATVGDRVEFVMITHG-EYYHTFHLHG 202 (313)
T ss_dssp EEEEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEES-SCCEEEEETT
T ss_pred ceeeccch-------------------------hcccCCcc-------cccccccccCCEEEEEEeccc-ccceeeeecC
Confidence 99999987 46776542 346799999999999999999 5678899999
Q ss_pred ceeEEEeeCCCcc---cceEecEEEECCCceEEEEEEeCC--CCceeEEEEeec
Q 008484 246 HNFTVVEVDAVYT---KPFTTEAILIAPGQTTNVLVQANQ--KPGRYFMAARPF 294 (564)
Q Consensus 246 h~~~via~DG~~~---~p~~~d~v~l~pg~r~dv~v~~~~--~pg~y~l~~~~~ 294 (564)
|.|+|++.||... .|..+|++.|.||||++++|.+.+ .||.|++|||..
T Consensus 203 h~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~ 256 (313)
T 3tas_A 203 HRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQ 256 (313)
T ss_dssp CCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred CeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCCh
Confidence 9999999998765 478899999999999999998764 379999999953
No 29
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=6.9e-44 Score=356.86 Aligned_cols=225 Identities=18% Similarity=0.298 Sum_probs=187.3
Q ss_pred cccCceEEEEEEEEEEEeecCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCc
Q 008484 27 PAEAAIKKYQFDVQVKNVSRLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYI 106 (564)
Q Consensus 27 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 106 (564)
.+.+.++.++|.+++..-.. ..+.++.+||++|||+|||++||+|+|+|+|.+++++||||||+++.+. +||++ +
T Consensus 24 ~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~-~ 98 (299)
T 3t9w_A 24 RAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL-M 98 (299)
T ss_dssp ---CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-T
T ss_pred ccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc-c
Confidence 45788899999988764221 3344566799999999999999999999999999999999999998754 99996 8
Q ss_pred cccccCCCCeEEEEEEeC------------CCCcceeEecchhhhh-------cceeeeEEEeCCCCCCCCCCCCCCcEE
Q 008484 107 TQCPIKTGNSYTYDFNVT------------GQRGTLWWHAHIFWLR-------ATVYGAIVIMPKPGSPFPFPQPNREEV 167 (564)
Q Consensus 107 ~~~~i~PG~~~~y~~~~~------------~~~Gt~wYH~h~~~~~-------~Gl~G~iiV~~~~~~~~~~~~~~~e~~ 167 (564)
+||+|+||++++|+|+++ .++||||||||.+.+. +||+|+|||+++... .+|+|++
T Consensus 99 ~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~~ 173 (299)
T 3t9w_A 99 NGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQFT 173 (299)
T ss_dssp TTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEE
T ss_pred ccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Cccccce
Confidence 999999999999999873 2689999999986532 699999999988653 3589999
Q ss_pred EEeecccccCHHHHHHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCce
Q 008484 168 ILLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHN 247 (564)
Q Consensus 168 l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~ 247 (564)
+++.+| .+||+.. ...+.++++.||+|||||+|++. ..++||||||.
T Consensus 174 l~~~~~-------------------------~~Ng~~~-------~~~p~l~v~~Ge~Vr~~liN~~~-~~HpfHlHGh~ 220 (299)
T 3t9w_A 174 VVFNDM-------------------------MINNRAH-------HDAPTFEANLGERVEWIAIGHGS-NFHTFHLHGHR 220 (299)
T ss_dssp EEEETT-------------------------EETTCCT-------TCCCEEEEETTCEEEEEEEEESS-CCCEEEETTCC
T ss_pred eeeeee-------------------------eecCccc-------cccccceecCCCEEEEEEEeccc-cceeeeEecce
Confidence 998765 4778765 24578999999999999999995 56789999999
Q ss_pred eEEEeeCCCcc---cceEecEEEECCCceEEEEEEeCC--CCceeEEEEeec
Q 008484 248 FTVVEVDAVYT---KPFTTEAILIAPGQTTNVLVQANQ--KPGRYFMAARPF 294 (564)
Q Consensus 248 ~~via~DG~~~---~p~~~d~v~l~pg~r~dv~v~~~~--~pg~y~l~~~~~ 294 (564)
|+|+..|+... .+..+|++.|.||||++++|.+.+ .||.|++|||..
T Consensus 221 F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~ 272 (299)
T 3t9w_A 221 WLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQ 272 (299)
T ss_dssp EESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred EEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCH
Confidence 99999988765 345789999999999999997654 379999999953
No 30
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=1e-43 Score=362.65 Aligned_cols=269 Identities=20% Similarity=0.213 Sum_probs=208.6
Q ss_pred ccCceEEEEEEEEEEEeec-CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCc
Q 008484 28 AEAAIKKYQFDVQVKNVSR-LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYI 106 (564)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 106 (564)
..+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.+.+
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~ 104 (333)
T 1mzy_A 28 SGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGL 104 (333)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCce
Confidence 3567899999999999887 5999999999999999999999999999999999 57899999998765445555555
Q ss_pred cccccCCCCeEEEEEEeCCCCcceeEecchhh-----hh-cceeeeEEEeCCCCCCCCC---CCCCCcEEEEeecccccC
Q 008484 107 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFW-----LR-ATVYGAIVIMPKPGSPFPF---PQPNREEVILLGEWWHTD 177 (564)
Q Consensus 107 ~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~-----~~-~Gl~G~iiV~~~~~~~~~~---~~~~~e~~l~~~d~~~~~ 177 (564)
+ .|+||++++|+|++ .++||||||||.++ +. +||+|+|||++++....+. ..+|+|++++++||++..
T Consensus 105 ~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~ 181 (333)
T 1mzy_A 105 T--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPK 181 (333)
T ss_dssp C--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred e--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCc
Confidence 5 49999999999998 78999999999973 54 8999999999765422111 145889999999998831
Q ss_pred --HHH---------HHHh-hhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcC
Q 008484 178 --VEE---------VEKQ-GQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAG 245 (564)
Q Consensus 178 --~~~---------~~~~-~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~g 245 (564)
... .+.. .... ....++.++|||+.+++ ...+.+++++||++|||.+|++....+ +.+++
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ING~~~~~-----~~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~ 253 (333)
T 1mzy_A 182 DEDGTYMRFSDPSEGYEDMVAVM--DTLIPSHIVFNGAVGAL-----TGEGALKAKVGDNVLFVHSQPNRDSRP-HLIGG 253 (333)
T ss_dssp CTTSCBCCCSSHHHHHHHHHHHH--TTTCCSEEEETTSTTTT-----SGGGCEEEETTCEEEEEEEESSSCBCE-EEETC
T ss_pred cccccccccccccccccchhHHh--hccCCcEEEECCccccc-----CCCcceEecCCCEEEEEECCCCCcccc-EEECC
Confidence 110 0000 0000 12456899999997632 124679999999988887776643333 45889
Q ss_pred ceeEEEeeCCCccc-ce-EecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCC
Q 008484 246 HNFTVVEVDAVYTK-PF-TTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIP 316 (564)
Q Consensus 246 h~~~via~DG~~~~-p~-~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 316 (564)
|.++|++ ||.+++ |. .+|++.|.||||+||+|++++ ||+|+++||..... ...+..++++|.+..
T Consensus 254 h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~----~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 254 HGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEA----VHKGATAHVLVEGEW 320 (333)
T ss_dssp CEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTCCEEEEEEESCC
T ss_pred CCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CEEEEEecChhhhH----hhCCCEEEEEEcCCC
Confidence 9999999 999985 44 589999999999999999998 79999999965321 023457889998643
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=2e-42 Score=353.78 Aligned_cols=269 Identities=23% Similarity=0.292 Sum_probs=201.9
Q ss_pred cCceEEEEEEEEEEEee--cCCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCc
Q 008484 29 EAAIKKYQFDVQVKNVS--RLCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYI 106 (564)
Q Consensus 29 ~~~~~~~~l~~~~~~~~--~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 106 (564)
.+.+++|+|++++..+. +||..+.+|+|||++|||+|+|++||+|+|+|+|.+. ++||||+++.+..++||.+.+
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~ 105 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL 105 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce
Confidence 55778999999999876 4599999999999999999999999999999999973 355565555554456666666
Q ss_pred cccccCCCCeEEEEEEeCCCCcceeEecchhh----hh-cceeeeEEEeCCCCCCCCC---CCCCCcEEEEeecccccC-
Q 008484 107 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFW----LR-ATVYGAIVIMPKPGSPFPF---PQPNREEVILLGEWWHTD- 177 (564)
Q Consensus 107 ~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~----~~-~Gl~G~iiV~~~~~~~~~~---~~~~~e~~l~~~d~~~~~- 177 (564)
++ |.||++++|+|++ .++||||||||.++ +. +||+|+|||++++....+. ..+|+|++|+++|||+..
T Consensus 106 ~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~ 182 (336)
T 1oe1_A 106 TN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKG 182 (336)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccc
Confidence 54 9999999999998 78999999999864 33 8999999999875422111 146889999999998741
Q ss_pred -HHHH---------HHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEE-EEEcCc
Q 008484 178 -VEEV---------EKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELF-FAIAGH 246 (564)
Q Consensus 178 -~~~~---------~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~-~~l~gh 246 (564)
...+ ....... .....++.++|||+.+++. ..+.+++++||++|| +|++....+. +.++||
T Consensus 183 ~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~-----~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh 254 (336)
T 1oe1_A 183 PDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT-----GANALTAKVGETVLL--IHSQANRDTRPHLIGGH 254 (336)
T ss_dssp TTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEE--EEEESSSCBCEEETTCC
T ss_pred cCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC-----CCcceEcCCCCEEEE--EecCCCCccceEEECCc
Confidence 1100 0000000 0123568999999986321 137899999997776 5555445444 456999
Q ss_pred eeEEEeeCCCcccce--EecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCC
Q 008484 247 NFTVVEVDAVYTKPF--TTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPN 317 (564)
Q Consensus 247 ~~~via~DG~~~~p~--~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~ 317 (564)
.|+|++ ||.+++|. .++++.|.+|||+||+|++++ ||.|+|+||..... ...+..++++|.+...
T Consensus 255 ~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~----~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 255 GDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEA----FELGAAGHIKVEGKWN 321 (336)
T ss_dssp EEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCCC
T ss_pred CceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhcc----ccCCCeEEEEECCCCC
Confidence 999997 99998653 479999999999999999999 79999999954211 0234678999986543
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=9.7e-42 Score=349.26 Aligned_cols=269 Identities=20% Similarity=0.265 Sum_probs=204.5
Q ss_pred ccCceEEEEEEEEEEEeec--CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCC
Q 008484 28 AEAAIKKYQFDVQVKNVSR--LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAY 105 (564)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 105 (564)
..+.+++|+|++++..++. ||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +++||||+++......||...
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~ 110 (340)
T 2bw4_A 34 TGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGA 110 (340)
T ss_dssp SSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCcc
Confidence 3567899999999998885 49999999999999999999999999999999998 778999998776433444444
Q ss_pred ccccccCCCCeEEEEEEeCCCCcceeEecchhh----hh-cceeeeEEEeCCCCCC----CCCCCCCCcEEEEeeccccc
Q 008484 106 ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFW----LR-ATVYGAIVIMPKPGSP----FPFPQPNREEVILLGEWWHT 176 (564)
Q Consensus 106 ~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~----~~-~Gl~G~iiV~~~~~~~----~~~~~~~~e~~l~~~d~~~~ 176 (564)
++ .|.||++++|+|++ .++||||||||.++ +. +||+|+|||++++... .+. .+++|++++++||++.
T Consensus 111 ~~--~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 111 LT--QVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVP 186 (340)
T ss_dssp GC--CBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCC
T ss_pred ce--EeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeec
Confidence 44 49999999999998 67999999999873 44 8999999999875311 111 3588999999999973
Q ss_pred --CHH---------HHHHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcC
Q 008484 177 --DVE---------EVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAG 245 (564)
Q Consensus 177 --~~~---------~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~g 245 (564)
... ......... .....++.++|||+.++. ...+.+++++||++||++.|++...++ +++++
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~-----~~~~~l~v~~G~r~Rl~n~~~~~~~~~-~~i~g 259 (340)
T 2bw4_A 187 KDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL-----TGDHALTAAVGERVLVVHSQANRDTRP-HLIGG 259 (340)
T ss_dssp BCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT-----SGGGCEEEETTCEEEEEEEESSSCBCE-EEETC
T ss_pred cccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc-----cCCCceEcCCCCEEEEEECCCCCccce-EEecC
Confidence 111 000000000 011356899999998632 114789999999888777776533333 56899
Q ss_pred ceeEEEeeCCCccc-ce-EecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCC
Q 008484 246 HNFTVVEVDAVYTK-PF-TTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIP 316 (564)
Q Consensus 246 h~~~via~DG~~~~-p~-~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 316 (564)
|.|+|++ ||.++. |. .+|++.|.||||+||+|++++ ||+|+|+||..... ...+..++++|.+..
T Consensus 260 h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h----~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 260 HGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEA----FELGAAGHFKVTGEW 326 (340)
T ss_dssp CEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCC
T ss_pred cceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHH----HhCCCEEEEEECCCC
Confidence 9999997 999884 43 589999999999999999999 79999999964211 012356888998644
No 33
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=3.2e-40 Score=336.39 Aligned_cols=236 Identities=19% Similarity=0.291 Sum_probs=190.3
Q ss_pred cCceEEEEEEEEEEEeecCCceee-EEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCcc
Q 008484 29 EAAIKKYQFDVQVKNVSRLCHAKP-IVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYIT 107 (564)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~g~~~~-~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~ 107 (564)
.+++++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+.+. .++||++ ++
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~t 118 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-MN 118 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-TT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-cc
Confidence 46779999999875 3554332 2235899999999999999999999999999999999999987 4599998 88
Q ss_pred ccccCCCCeEEEEEEeCC------------CCcceeEecchh------hhh-cceeeeEEEeCCCCCCCCCCCCCCcEEE
Q 008484 108 QCPIKTGNSYTYDFNVTG------------QRGTLWWHAHIF------WLR-ATVYGAIVIMPKPGSPFPFPQPNREEVI 168 (564)
Q Consensus 108 ~~~i~PG~~~~y~~~~~~------------~~Gt~wYH~h~~------~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l 168 (564)
||+|.||++++|+|++.. ++|+||||||.. .+. .||+|+|||+++.... +|+|+++
T Consensus 119 ~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~~-----pd~e~~l 193 (343)
T 3cg8_A 119 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHTI 193 (343)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEEE
T ss_pred cccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCCC-----CCceEEE
Confidence 999999999999999822 358999999973 233 8999999999886532 4789999
Q ss_pred EeecccccCHHHHHHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCcee
Q 008484 169 LLGEWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNF 248 (564)
Q Consensus 169 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~ 248 (564)
+++|| +|||+.++ ..+.++++.||+|||||+|.+. ..|+||||||.|
T Consensus 194 ~~~d~-------------------------~iNG~~~~-------~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f 240 (343)
T 3cg8_A 194 VFNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRW 240 (343)
T ss_dssp EEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCE
T ss_pred Ecccc-------------------------eecccCCC-------CCccEEeCCCCEEEEEEEcCCc-cccccEecCcEE
Confidence 88764 79998742 3478999999999999999995 688899999999
Q ss_pred EEEeeCCCccc----ceEecEEEECCCceEEEEEEeC--CCCceeEEEEeecCCCCCCCCCCceEEEEEEcc
Q 008484 249 TVVEVDAVYTK----PFTTEAILIAPGQTTNVLVQAN--QKPGRYFMAARPFNDAPIPVDNKTATGILQYKG 314 (564)
Q Consensus 249 ~via~DG~~~~----p~~~d~v~l~pg~r~dv~v~~~--~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~ 314 (564)
+|+ .||.+.. +..+|++.|.|||+++++++++ +.||.|++|||..... .....+++.+..
T Consensus 241 ~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~-----~~GM~g~~~V~~ 306 (343)
T 3cg8_A 241 ADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHS-----DMGMVGLFLVKK 306 (343)
T ss_dssp ESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH-----HTTCEEEEEEEC
T ss_pred EEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHH-----hccCcEEEEEec
Confidence 997 4675442 4678999999999999999973 3479999999953211 123456666654
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=8.5e-40 Score=362.12 Aligned_cols=249 Identities=18% Similarity=0.203 Sum_probs=184.6
Q ss_pred cCceEEEEEEEEEEEeecC--Cc------------ee--eEEEE----------------CCcCCCCeEEeecCCEEEEE
Q 008484 29 EAAIKKYQFDVQVKNVSRL--CH------------AK--PIVTV----------------NGRFPGPTIYVREGDRVLVN 76 (564)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~--g~------------~~--~~~~~----------------Ng~~pgP~i~v~~Gd~v~v~ 76 (564)
.+++|+|.+-+++..++.. |. .. -...| ++++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4788999999999887754 11 11 11233 34789999999999999999
Q ss_pred EEeCCCCCceeeeCCCCCCCCCCCCCCCCcc--------ccccCCCCeEEEEEEeCCC-----Cc----ceeEecchhh-
Q 008484 77 VTNHAQYNMSIHWHGLKQYRNGWADGPAYIT--------QCPIKTGNSYTYDFNVTGQ-----RG----TLWWHAHIFW- 138 (564)
Q Consensus 77 l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~--------~~~i~PG~~~~y~~~~~~~-----~G----t~wYH~h~~~- 138 (564)
|+|.++.+++|||||+++.. ++||+++++ ||+|+||++++|+|+++++ +| |||||||.+.
T Consensus 83 ~~N~l~~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 99999999999999999975 499999876 9999999999999999543 57 9999999974
Q ss_pred -hh-cceeeeEEEeCCCCCCC--CCCCCCCcEEEEee------cccccCHHHHHHhhhccCCCCCCCceEEEcCcCCCCC
Q 008484 139 -LR-ATVYGAIVIMPKPGSPF--PFPQPNREEVILLG------EWWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLF 208 (564)
Q Consensus 139 -~~-~Gl~G~iiV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~ 208 (564)
+. +||+|+|||+++..... ..+..++|++|+++ ||++............ ......++.++|||+.++
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~iNG~~~~-- 237 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRAS-SEVKNSHEFHAINGMIYN-- 237 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSSC--
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCC-cchhhcCceeccCCEecC--
Confidence 33 79999999999864321 11234689999998 7877644321000000 011234689999999752
Q ss_pred CCCCCCeeeEEEecCcEEEEEEEecCCCC-eEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCCCCcee
Q 008484 209 PCSEKHTFAMEVESGKTYLLRIINAALND-ELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRY 287 (564)
Q Consensus 209 ~~~~~~~~~l~~~~G~~~rlriiN~~~~~-~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y 287 (564)
.+.+++++|++|||||+|++... .|.||+|||.|+|++.|| ..+|++.|.||||++|+|++++ ||.|
T Consensus 238 ------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~-pG~w 305 (647)
T 1sdd_B 238 ------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASK-PGWW 305 (647)
T ss_dssp ------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCS-SEEE
T ss_pred ------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEecc-ceEe
Confidence 37899999999999999999764 889999999999999876 4789999999999999999999 7999
Q ss_pred EEEEeec
Q 008484 288 FMAARPF 294 (564)
Q Consensus 288 ~l~~~~~ 294 (564)
+||||..
T Consensus 306 ~~hch~~ 312 (647)
T 1sdd_B 306 LLDTEVG 312 (647)
T ss_dssp EEECCCH
T ss_pred ecccCcc
Confidence 9999953
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1e-38 Score=339.37 Aligned_cols=259 Identities=22% Similarity=0.318 Sum_probs=208.5
Q ss_pred CceEEEEEEEEEEEeec-CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCC--CCceeeeCCCCCCCCCCCCCCCCc
Q 008484 30 AAIKKYQFDVQVKNVSR-LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQ--YNMSIHWHGLKQYRNGWADGPAYI 106 (564)
Q Consensus 30 ~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~~~ 106 (564)
+..+.++|++++..... +|....+|+|||++|||+|++++||+++|||.|.+. ..++|||||+.. +||++..
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCcc
Confidence 45667888877776666 688889999999999999999999999999999985 578999999852 7888754
Q ss_pred cccccCCCCeEEEEEEeCCCCcceeEecchh---hhh-cceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCHHHH-
Q 008484 107 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHIF---WLR-ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEEV- 181 (564)
Q Consensus 107 ~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~---~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~- 181 (564)
+ .|.|||+++|.|++ +++|+||||||.+ .+. .||+|+|+|+++.. .+..++|+++++++|+.......
T Consensus 236 ~--~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 T--QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp C--CBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCC
T ss_pred E--EeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCccccc
Confidence 4 49999999999998 6799999999974 233 89999999998753 22458899999999987532100
Q ss_pred ------HHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCC
Q 008484 182 ------EKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDA 255 (564)
Q Consensus 182 ------~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG 255 (564)
.... .+ ..++.++|||+.+++. ....+++++|++|||||+|++....|.||||||.|+||+.||
T Consensus 309 g~~~~~~~~~--~~---~~~~~~~iNG~~~~~~-----~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG 378 (447)
T 2dv6_A 309 GEQEMDYEKL--IN---EKPEYFLFNGSVGSLT-----RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLG 378 (447)
T ss_dssp EECCBBHHHH--HT---TCCSEEEETTSTTCCC-----CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGG
T ss_pred ccccCChHHh--hc---cCCCEEEECCcccCCC-----CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCC
Confidence 0000 11 2358899999987431 124799999999999999999888999999999999999999
Q ss_pred Ccccc-e-EecEEEECCCceEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCC
Q 008484 256 VYTKP-F-TTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIP 316 (564)
Q Consensus 256 ~~~~p-~-~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 316 (564)
.++.| . .+|++.|.||||++|+|++++ ||.|+||||..... ..+..++++|.+..
T Consensus 379 ~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG~~~~hch~~~h~-----~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 379 SVVSPPLIGVQTVSVPPGGATIVDFKIDR-AGRYILVDHALSRL-----EHGLVGFLNVDGPK 435 (447)
T ss_dssp CSSSCCEEEESEEEECTTEEEEEEEECCS-CEEEEEEESSGGGG-----GGTCCEEEEECSCS
T ss_pred cccCCCcccccEEEECCCcEEEEEEECCC-CEEEEEEecCcCcc-----ccCCEEEEEEeCCC
Confidence 99854 4 589999999999999999998 79999999965432 23457889997643
No 36
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=5.1e-41 Score=337.93 Aligned_cols=213 Identities=18% Similarity=0.247 Sum_probs=158.1
Q ss_pred eEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCc------c--ccccCCCCeEEEEEEe
Q 008484 52 PIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYI------T--QCPIKTGNSYTYDFNV 123 (564)
Q Consensus 52 ~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~------~--~~~i~PG~~~~y~~~~ 123 (564)
...++| ++|||+|+|++||+|+|+|+|.++.+++|||||++.... +||++.. + ||+|+||++++|+|++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 345688 689999999999999999999999999999999996543 6665543 3 7999999999999998
Q ss_pred CCC---------CcceeEecchhh--hh-cceeeeEEEeCCCCCCC-CC-CCCCCcEEEEeecccccCHHHHHHhhhccC
Q 008484 124 TGQ---------RGTLWWHAHIFW--LR-ATVYGAIVIMPKPGSPF-PF-PQPNREEVILLGEWWHTDVEEVEKQGQKMG 189 (564)
Q Consensus 124 ~~~---------~Gt~wYH~h~~~--~~-~Gl~G~iiV~~~~~~~~-~~-~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g 189 (564)
+++ +||||||||... +. +||+|+|||+++..... +. ...++|++++++||.....
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~~----------- 195 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKS----------- 195 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTSS-----------
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccccc-----------
Confidence 433 379999999876 33 89999999998753211 11 1357899999999843210
Q ss_pred CCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCC-CeEEEEEcCceeEEEeeCCCcccceEecEEEE
Q 008484 190 LPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAILI 268 (564)
Q Consensus 190 ~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l 268 (564)
.....++.++|||+.+. ..+.+++++|+++||||+|++.. ..+.||||||.|++ || ..+|++.|
T Consensus 196 ~~~~~~~~~~ING~~~~-------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l 260 (306)
T 1sdd_A 196 WNQTSSLMYTVNGYVNG-------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITL 260 (306)
T ss_dssp SSCCCCEEECSSSCCSS-------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCE
T ss_pred cccCCCcceeeCCEecC-------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEE
Confidence 00123578999999752 23678999999999999999976 57789999999985 77 46899999
Q ss_pred CCCceEEEEEEeCCCCceeEEEEeec
Q 008484 269 APGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 269 ~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
.||||++|+|++++ ||.|++|||..
T Consensus 261 ~pger~~v~~~~~~-pG~~~~hch~~ 285 (306)
T 1sdd_A 261 VSATSTTANMTVSP-EGRWTIASLIP 285 (306)
T ss_dssp ETTCCBC---------CCCCCBCCST
T ss_pred CCCcEEEEEEEcCC-CeEEEEEeCCh
Confidence 99999999999998 79999999954
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=1.2e-39 Score=362.78 Aligned_cols=249 Identities=14% Similarity=0.120 Sum_probs=195.3
Q ss_pred ccCceEEEEEEEEEEEe--ecCCc---------------eeeE--E-----EECC-----------cCCCCeEEeecCCE
Q 008484 28 AEAAIKKYQFDVQVKNV--SRLCH---------------AKPI--V-----TVNG-----------RFPGPTIYVREGDR 72 (564)
Q Consensus 28 ~~~~~~~~~l~~~~~~~--~~~g~---------------~~~~--~-----~~Ng-----------~~pgP~i~v~~Gd~ 72 (564)
..+.+|+|.|.+++..+ +++|. ...+ + +|++ ++|||+|||++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 36889999999999875 45543 1112 2 2233 68999999999999
Q ss_pred EEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCC---------CCcceeEecchhhh--h-
Q 008484 73 VLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTG---------QRGTLWWHAHIFWL--R- 140 (564)
Q Consensus 73 v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~---------~~Gt~wYH~h~~~~--~- 140 (564)
|+|+|+|.++.+++|||||+++..... ||+++ +||+|+||++++|+|++++ ++||||||||.+.+ .
T Consensus 209 v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~ 286 (770)
T 2r7e_B 209 IMVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVH 286 (770)
T ss_dssp EEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHH
T ss_pred EEEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHh
Confidence 999999999999999999999998742 69988 8999999999999999843 79999999999874 3
Q ss_pred cceeeeEEEeCCCCCCCC--CCCCCCcEEEEeec------ccccCHHHHHHhhhc-cC-------CCCCCCceEEEcCcC
Q 008484 141 ATVYGAIVIMPKPGSPFP--FPQPNREEVILLGE------WWHTDVEEVEKQGQK-MG-------LPPNMSDAHTINGKP 204 (564)
Q Consensus 141 ~Gl~G~iiV~~~~~~~~~--~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~-~g-------~~~~~~~~~~iNG~~ 204 (564)
+||+|+|||+++...... ....++|++|++++ ||.+.... .+.. .. ......+.++|||+.
T Consensus 287 ~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~---~~~~~p~~~~~~d~~~~~~~~~~~ING~~ 363 (770)
T 2r7e_B 287 SGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENME---RNCRAPCNIQMEDPTFKENYRFHAINGYI 363 (770)
T ss_dssp TSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGS---SCSCCSSCCCSSSSSSTTTSCEECTTSCT
T ss_pred CCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchh---hcccCccccccCCccccccCCccccCCcc
Confidence 899999999998643211 12357899888743 55432211 0100 00 001123568999997
Q ss_pred CCCCCCCCCCeeeEEEecCcEEEEEEEecCCC-CeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCCC
Q 008484 205 GPLFPCSEKHTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQK 283 (564)
Q Consensus 205 ~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~ 283 (564)
+ ...+.+++++|++|||||+|++.. ..|+||||||.|+|++.||. .+|++.|.||||++|+|++++
T Consensus 364 ~-------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~- 430 (770)
T 2r7e_B 364 M-------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK- 430 (770)
T ss_dssp T-------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS-
T ss_pred C-------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC-
Confidence 5 134678999999999999999965 37899999999999999974 799999999999999999998
Q ss_pred CceeEEEEeec
Q 008484 284 PGRYFMAARPF 294 (564)
Q Consensus 284 pg~y~l~~~~~ 294 (564)
||.|+||||..
T Consensus 431 pG~w~~hcH~~ 441 (770)
T 2r7e_B 431 AGIWRVECLIG 441 (770)
T ss_dssp CBCCCBCCCSH
T ss_pred CCceEEEeccc
Confidence 79999999953
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=4.9e-37 Score=341.30 Aligned_cols=218 Identities=20% Similarity=0.297 Sum_probs=168.6
Q ss_pred cCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCC-----CCCCccccccCCCCeEEEEEEeCCCCc-----
Q 008484 59 RFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWAD-----GPAYITQCPIKTGNSYTYDFNVTGQRG----- 128 (564)
Q Consensus 59 ~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~D-----Gv~~~~~~~i~PG~~~~y~~~~~~~~G----- 128 (564)
.+|||+||+++||+|+|+|+|.++.+++|||||+.+. .+|+| |++.++||+|+||++++|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999985 45565 567788999999999999999955444
Q ss_pred ----ceeEecchhhhh---cceeeeEEEeCCCCCC-CC-CCCCCCcEEEEeec------ccccCHHHHHHhhhccCCCC-
Q 008484 129 ----TLWWHAHIFWLR---ATVYGAIVIMPKPGSP-FP-FPQPNREEVILLGE------WWHTDVEEVEKQGQKMGLPP- 192 (564)
Q Consensus 129 ----t~wYH~h~~~~~---~Gl~G~iiV~~~~~~~-~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~~g~~~- 192 (564)
|||||||.+.+. +||+|+|||+++.... .. ....|+|++|++++ ||.......+.. .......
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~~~~~-~p~~v~~~ 605 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQRFLP-NPAGVQLE 605 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHHHHSS-SSSCSCCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchhhccc-Cchhcccc
Confidence 999999998754 8999999999875321 10 11458899999864 554322111100 0000000
Q ss_pred -----CCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCC-CeEEEEEcCceeEEEeeCCCcccceEecEE
Q 008484 193 -----NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAI 266 (564)
Q Consensus 193 -----~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v 266 (564)
.....++|||+.+. .. .+.+++||+|||||+|+++. ..|+||||||.|+|+ +..+|++
T Consensus 606 ~~~~~~~~~~~~ING~~~~-------~~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv 669 (742)
T 2r7e_A 606 DPEFQASNIMHSINGYVFD-------SL-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTL 669 (742)
T ss_dssp CHHHHGGGCCBCTTTTCSS-------CC-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSS
T ss_pred cccccccCceeeecCcCCC-------CC-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEE
Confidence 01135789999751 11 38999999999999998864 468999999999986 4678999
Q ss_pred EECCCceEEEEEEeCCCCceeEEEEeecC
Q 008484 267 LIAPGQTTNVLVQANQKPGRYFMAARPFN 295 (564)
Q Consensus 267 ~l~pg~r~dv~v~~~~~pg~y~l~~~~~~ 295 (564)
.|.||||++|+|++++ ||.|+||||...
T Consensus 670 ~l~Pg~~~~v~~~ad~-pG~w~~hcH~~~ 697 (742)
T 2r7e_A 670 TLFPFSGETVFMSMEN-PGLWILGCHNSD 697 (742)
T ss_dssp CCCCCSSEECCEECCC-CCCSCCEECCCS
T ss_pred EECCCcEEEEEEEcCC-CeEEEEEeCCch
Confidence 9999999999999998 799999999654
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=7.3e-30 Score=254.34 Aligned_cols=232 Identities=19% Similarity=0.229 Sum_probs=162.4
Q ss_pred ceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEE
Q 008484 196 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN 275 (564)
Q Consensus 196 ~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~d 275 (564)
..+++||+. ..|+|++++|+++++++.|.. ...+++|+||.. ..+.||.+. .+...|.||++++
T Consensus 55 ~~~~~ng~~---------pgP~i~~~~Gd~v~v~~~N~~-~~~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~ 118 (288)
T 3gdc_A 55 KGWSYNGRI---------PGPTLWAREGDALRIHFTNAG-AHPHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFT 118 (288)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECS-SSCBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEE
T ss_pred EEEEECCcc---------CCCcEEEeCCCEEEEEEEeCC-CCcccEEecccc--ccccCCCCC----ccceeECCCCEEE
Confidence 689999985 237999999999999999998 456779999976 457899854 2446789999999
Q ss_pred EEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCCCC
Q 008484 276 VLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVP 355 (564)
Q Consensus 276 v~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~p 355 (564)
..+++++ +|+||+|||...........+.+.-| ...... .+
T Consensus 119 y~f~~~~-~Gt~~yH~H~~~~~~~~~~Gl~G~li--V~~~~~--------~~---------------------------- 159 (288)
T 3gdc_A 119 YEFDATP-FGTHLYHCHQSPLAPHIAKGLYGGFI--VEPKEG--------RP---------------------------- 159 (288)
T ss_dssp EEEECCS-CEEEEEECCCSSHHHHHHTTCEEEEE--EECSSC--------CC----------------------------
T ss_pred EEEEcCC-CccEEEEecCcchHHHHhCcCeEEEE--EeCCcc--------CC----------------------------
Confidence 9999977 79999999953100000122223222 221100 00
Q ss_pred cCcceEEEEEE-ccCCCCCCcccCCc-eeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCCCCCCCCc
Q 008484 356 QKVDRKLFYTI-GFGKDSCPTCVNGT-RLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASL 433 (564)
Q Consensus 356 ~~~d~~~~~~~-~~~~~~~~~~~~g~-~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (564)
..++++.+.+ .+... +|. .-.|++|++.|..
T Consensus 160 -~~d~e~~l~~~d~~~~------~g~~~~~~~iNG~~~~~---------------------------------------- 192 (288)
T 3gdc_A 160 -PADDEMVMVMNGYNTD------GGDDNEFYSVNGLPFHF---------------------------------------- 192 (288)
T ss_dssp -CCSEEEEEEEEEECCS------STTCCSEEEETTSTTHH----------------------------------------
T ss_pred -CCcceEEEEEeeEecC------CCCCcceEEECcccccc----------------------------------------
Confidence 0233333222 11110 111 1135666653310
Q ss_pred CCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEE
Q 008484 434 GTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTA 513 (564)
Q Consensus 434 ~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~ 513 (564)
....+.++.|++|+|.+.|.+ .....||||+||+.|+|++.|. .+..|.++||+.|+|+++..
T Consensus 193 ----~~~~l~v~~Ge~vr~~l~N~g-~~~~~H~fHlhG~~f~v~~~g~------------~~~~~~~~Dtv~v~pg~~~~ 255 (288)
T 3gdc_A 193 ----MDFPVKVKQHELVRIHLINVL-EYDPINSFHIHGNFFHYYPTGT------------MLTPSEYTDTISQVQGQRGI 255 (288)
T ss_dssp ----HHSCEEEETTCCEEEEEEECC-CSSSEEEEEETTCCEEEEETTC------------CSSCSEEESEEEEETTCEEE
T ss_pred ----cCcccccCCCCEEEEEEEeCC-CCCcceeEEEcCCEEEEEcCCC------------ccCCCceeeEEEeCCCceEE
Confidence 012357789999999999975 1124699999999999997542 12346899999999999999
Q ss_pred EEEEecCceeeEEEeechhchhcccEEEEEEec
Q 008484 514 IRFRADNPGVWFMHCHLELHTGWGLKTAFAVED 546 (564)
Q Consensus 514 irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~ 546 (564)
|+|++++||.|+||||+++|++.|||+.|+|.+
T Consensus 256 v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 256 LELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 999999999999999999999999999999863
No 40
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.96 E-value=8.8e-29 Score=252.00 Aligned_cols=216 Identities=18% Similarity=0.215 Sum_probs=155.4
Q ss_pred eeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCCC-----------
Q 008484 215 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQK----------- 283 (564)
Q Consensus 215 ~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~----------- 283 (564)
.|+|++++|+++|+|++|... ..+++|.||..+. .+.||.++ +...|.||++++..++++++
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~-~~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCC-CCeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 389999999999999999995 4556999998877 68999864 34568999999999998762
Q ss_pred -CceeEEEEeecCCCC---CCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCCCCcCcc
Q 008484 284 -PGRYFMAARPFNDAP---IPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVD 359 (564)
Q Consensus 284 -pg~y~l~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d 359 (564)
.|.|++|+|...... .....+.+..|++..+.. . +|
T Consensus 149 ~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-------------------------------------~---pd 188 (343)
T 3cg8_A 149 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-------------------------------------L---PD 188 (343)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-------------------------------------C---CS
T ss_pred CceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-------------------------------------C---CC
Confidence 378999998422100 001123333334321100 0 13
Q ss_pred eEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCCCCCCCCcCCCCce
Q 008484 360 RKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRAT 439 (564)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (564)
+++.+.+. .|.+||+.| + ..
T Consensus 189 ~e~~l~~~---------------d~~iNG~~~--~-------------------------------------------~~ 208 (343)
T 3cg8_A 189 ATHTIVFN---------------DMTINNRKP--H-------------------------------------------TG 208 (343)
T ss_dssp EEEEEEEE---------------TTEETTCCT--T-------------------------------------------CC
T ss_pred ceEEEEcc---------------cceecccCC--C-------------------------------------------CC
Confidence 44433221 156777532 0 13
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEe-
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA- 518 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a- 518 (564)
..+.++.|++|+|+|.|.+ .+.||||||||.|+|+.. |.+.. ....+.++||+.|+|++++.|+|++
T Consensus 209 ~~l~v~~Ge~vri~l~N~g---~~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv~v~PG~~~~v~~~~~ 276 (343)
T 3cg8_A 209 PDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKITGPADSFGFQIIAG 276 (343)
T ss_dssp CCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEEECTTCEEEEEEETT
T ss_pred ccEEeCCCCEEEEEEEcCC---ccccccEecCcEEEEecc--CcccC-------CCCcccceeeEEeCCCCEEEEEEEEC
Confidence 4578899999999999976 579999999999999743 32211 1123578999999999999999995
Q ss_pred --cCceeeEEEeechhchhcccEEEEEEecCCC
Q 008484 519 --DNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 549 (564)
Q Consensus 519 --dnpG~wl~HCHil~H~d~GM~~~~~V~~~~~ 549 (564)
+|||.|+||||+++|++.|||+.|.|.+...
T Consensus 277 ~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 277 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 8999999999999999999999999986443
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=3.7e-28 Score=244.97 Aligned_cols=242 Identities=19% Similarity=0.220 Sum_probs=161.5
Q ss_pred ceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEE-EeeCCCcccceEecEEEECCCceE
Q 008484 196 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTV-VEVDAVYTKPFTTEAILIAPGQTT 274 (564)
Q Consensus 196 ~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~v-ia~DG~~~~p~~~d~v~l~pg~r~ 274 (564)
..+++||+. ..|+|++++|+++++|+.|.. ...+++|+||....- .+.||.+. +....|.||+++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMT-TLPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECS-SSCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCC-CCceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 678999985 238999999999999999998 456779999986543 36899753 234578999999
Q ss_pred EEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCCC
Q 008484 275 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADV 354 (564)
Q Consensus 275 dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~ 354 (564)
+..+++++ +|+||+|||.........+.+.+. +|. ...... ..
T Consensus 89 ~y~f~~~~-~Gt~wYH~H~~~~~~~~~~Gl~G~-lIV-~~~~~~--------------~~-------------------- 131 (318)
T 3g5w_A 89 TYKFKAEP-AGTMWYHCHVNVNEHVTMRGMWGP-LIV-EPKNPL--------------PI-------------------- 131 (318)
T ss_dssp EEEEECCS-CEEEEEECCSSHHHHHHHSCCEEE-EEE-ECSSCC--------------HH--------------------
T ss_pred EEEEEcCC-CEEEEEEccCChhhhhccCCCEEE-EEE-cCCCcc--------------cc--------------------
Confidence 99999987 799999999521100001222232 222 221100 00
Q ss_pred CcCcceEEEEEEc-cCCCCCC-cccCC----ceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCCCC
Q 008484 355 PQKVDRKLFYTIG-FGKDSCP-TCVNG----TRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAP 428 (564)
Q Consensus 355 p~~~d~~~~~~~~-~~~~~~~-~~~~g----~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 428 (564)
+...|+++.+.+. ....... ....+ ..-.|.+||+.|
T Consensus 132 ~~~~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~------------------------------------- 174 (318)
T 3g5w_A 132 EKTVTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSF------------------------------------- 174 (318)
T ss_dssp HHTCCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCB-------------------------------------
T ss_pred cccccceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCC-------------------------------------
Confidence 0011222222110 0000000 00000 001134444322
Q ss_pred CCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecC
Q 008484 429 LTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT 508 (564)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~ 508 (564)
.....+.++.|++|+|+|.|.+ ...||||||||.|+|++.... .+..|.++||+.|+|
T Consensus 175 --------~~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~-----------~~~~p~~~dtv~l~p 232 (318)
T 3g5w_A 175 --------PETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGF-----------PLDKPIKGDTVLIGP 232 (318)
T ss_dssp --------TSSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTE-----------EEEEEEEESEEEECT
T ss_pred --------CCCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCc-----------ccCCCccccEEEECC
Confidence 1123468899999999999976 458999999999999998421 223578999999999
Q ss_pred CCEEEEEEEecCceeeEEEeechhchh------cccEEEEEEecC
Q 008484 509 GGWTAIRFRADNPGVWFMHCHLELHTG------WGLKTAFAVEDG 547 (564)
Q Consensus 509 ~g~~~irf~adnpG~wl~HCHil~H~d------~GM~~~~~V~~~ 547 (564)
++++.|+|+++|||.|+||||+++|++ .|||.+++|...
T Consensus 233 ger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 233 GERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp TCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred CCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 999999999999999999999999998 689999998643
No 42
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=1.3e-27 Score=243.78 Aligned_cols=239 Identities=16% Similarity=0.177 Sum_probs=157.1
Q ss_pred ceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEe---eCCCcccceEecEEEECCCc
Q 008484 196 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVE---VDAVYTKPFTTEAILIAPGQ 272 (564)
Q Consensus 196 ~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via---~DG~~~~p~~~d~v~l~pg~ 272 (564)
..+++||+. ..|+|++++|+++|+|++|... ..+++|.|| +.+.. .||.+. +....|.|||
T Consensus 24 ~~~~~NG~~---------pGP~I~v~~Gd~v~v~v~N~l~-~~~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG~ 87 (339)
T 2zwn_A 24 KVFGFNGQV---------PGPLIHVQEGDDVIVNVTNNTS-LPHTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAGD 87 (339)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEEESS-SCBCCEEET--CCCTTCGGGSCCBT----TTBCCBCTTC
T ss_pred EEEEECCcc---------CCCeEEEECCCEEEEEEEECCC-CCccEEeCC--CCcCCCcccCCCCc----cccCccCCCC
Confidence 678999984 1289999999999999999985 445566666 44555 599853 3456799999
Q ss_pred eEEEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCC
Q 008484 273 TTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPA 352 (564)
Q Consensus 273 r~dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~ 352 (564)
|+++.|++++ +|+||+|||...........+.+.-++. ..... .
T Consensus 88 ~~~y~f~~~~-~Gt~wyH~H~~~~~q~~~~Gl~G~liV~--p~~~~------~--------------------------- 131 (339)
T 2zwn_A 88 SYTYKFKADR-IGTLWYHCHVNVNEHVGVRGMWGPLIVD--PKQPL------P--------------------------- 131 (339)
T ss_dssp EEEEEEECCS-CEEEEEECCSSHHHHTTTSCCEEEEEEE--CSSCC------T---------------------------
T ss_pred eEEEEEECCC-CEEEEEEecCCchhhhhcCCceEeEEec--CCCcc------c---------------------------
Confidence 9999999987 7999999995320000002222322222 11100 0
Q ss_pred CCCcCcceEEEEEEc---cCCCCCCc--ccCC-ceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCC
Q 008484 353 DVPQKVDRKLFYTIG---FGKDSCPT--CVNG-TRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTG 426 (564)
Q Consensus 353 ~~p~~~d~~~~~~~~---~~~~~~~~--~~~g-~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~ 426 (564)
++...++++.+.+. ........ ...+ ..-.|.+||+.|
T Consensus 132 -~~~~~d~e~~l~l~d~~~~~~~~~~~~g~~~~~~~~~~ING~~~----------------------------------- 175 (339)
T 2zwn_A 132 -IEKRVTKDVIMMMSTWESAVADKYGEGGTPMNVADYFSVNAKSF----------------------------------- 175 (339)
T ss_dssp -TGGGCSEEEEEEEEEECGGGTTCTTCCCSTTSCCCEEEETTBCT-----------------------------------
T ss_pred -ccccCCceEEEEeeheecccccccCCCCCCccccceEEEccccC-----------------------------------
Confidence 00011222222110 00000000 0000 000133333211
Q ss_pred CCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEe
Q 008484 427 APLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAV 506 (564)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 506 (564)
....++.++.|++++|+|.|.+ ...||||||||+|+|++.... .+.+|.++||+.|
T Consensus 176 ----------~~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~-----------~~~~p~~~dtv~l 231 (339)
T 2zwn_A 176 ----------PLTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGL-----------PLDSPYYADTVLV 231 (339)
T ss_dssp ----------TSSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTE-----------EEEEEEEESEEEE
T ss_pred ----------CCcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCe-----------ecCCCcEEEEEEE
Confidence 1134477889999999999976 569999999999999998421 2234788999999
Q ss_pred cCCCEEEEEEEecCceeeEEEeechhc------hhcccEEEEEEec
Q 008484 507 PTGGWTAIRFRADNPGVWFMHCHLELH------TGWGLKTAFAVED 546 (564)
Q Consensus 507 p~~g~~~irf~adnpG~wl~HCHil~H------~d~GM~~~~~V~~ 546 (564)
+||+++.|+|++|+||.|++|||+++| ++.||++++.|..
T Consensus 232 ~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g 277 (339)
T 2zwn_A 232 SPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDG 277 (339)
T ss_dssp CTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETT
T ss_pred CCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECC
Confidence 999999999999999999999999999 8899999998864
No 43
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=2.2e-27 Score=235.01 Aligned_cols=216 Identities=17% Similarity=0.221 Sum_probs=156.7
Q ss_pred eeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCCC-----------
Q 008484 215 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQK----------- 283 (564)
Q Consensus 215 ~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~----------- 283 (564)
.|+|++++|+++++++.|.. ....++|.||..+.. +.||.. +..-.|.||+++...++++++
T Consensus 35 GP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~ 107 (276)
T 3kw8_A 35 GPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 107 (276)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCCC
Confidence 38999999999999999997 566779999987754 689975 234568999999999999762
Q ss_pred -CceeEEEEeecCCC---CCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCCCCcCcc
Q 008484 284 -PGRYFMAARPFNDA---PIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVD 359 (564)
Q Consensus 284 -pg~y~l~~~~~~~~---~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d 359 (564)
+|.||+|||..... ......+.+.-||. .. .. .. .|
T Consensus 108 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~-~~-~~-----------------------------------~~---~d 147 (276)
T 3kw8_A 108 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVR-RK-GD-----------------------------------VL---PD 147 (276)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEE-CT-TC-----------------------------------CC---CS
T ss_pred CCEEEEEecCccccccchhhhhCccEEEEEEe-cC-CC-----------------------------------cc---cc
Confidence 48999999953210 00011222322222 10 00 00 14
Q ss_pred eEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCCCCCCCCcCCCCce
Q 008484 360 RKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRAT 439 (564)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (564)
+++.+.+. .|.+||+.|. ..
T Consensus 148 rE~~l~l~---------------~~~iNG~~~~---------------------------------------------~~ 167 (276)
T 3kw8_A 148 ATHTIVFN---------------DMTINNRKPH---------------------------------------------TG 167 (276)
T ss_dssp EEEEEEEE---------------TTEETTCCTT---------------------------------------------CC
T ss_pred cceEEEec---------------ccccceeccc---------------------------------------------CC
Confidence 55543321 1577775331 13
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
+.+.++.|++|+|+|.|.+ .+.|||||||+.|++++.| .++.. ...+.++||+.|+|+++..++|+++
T Consensus 168 p~i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~G--~~~~p-------~~~~~~~Dtv~v~pg~~~~~~~~~~ 235 (276)
T 3kw8_A 168 PDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRTG--ILTGP-------DDPSRVIDNKITGPADSFGFQIIAG 235 (276)
T ss_dssp CCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSSS--SCCST-------TCCCCEESEEEECTTCEEEEEEETT
T ss_pred CCEEEecCCEEEEEEecCC---CcceeEEEccceeEEeccC--ccCCC-------cccccCCccEEeCCCceEEEEEEec
Confidence 4578899999999999976 5799999999999997643 22211 1235689999999999999999997
Q ss_pred ---CceeeEEEeechhchhcccEEEEEEecCCC
Q 008484 520 ---NPGVWFMHCHLELHTGWGLKTAFAVEDGPG 549 (564)
Q Consensus 520 ---npG~wl~HCHil~H~d~GM~~~~~V~~~~~ 549 (564)
|||.|+||||+++|++.|||+.|.|.++..
T Consensus 236 ~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 236 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred cCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 899999999999999999999999987654
No 44
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=2.4e-27 Score=237.02 Aligned_cols=216 Identities=18% Similarity=0.282 Sum_probs=150.7
Q ss_pred eeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCC------------
Q 008484 215 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ------------ 282 (564)
Q Consensus 215 ~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~------------ 282 (564)
.|+|++++|+++++++.|.. ....++|.||..+. -+.||..+. .-.|.||++++..++++.
T Consensus 57 GP~i~~~~GD~v~v~~~N~l-~~~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTT-DRVLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECC-CCCccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 48999999999999999998 45667999998665 367997541 124789999999988763
Q ss_pred CCceeEEEEeecCCCCC---CCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCCCCcCcc
Q 008484 283 KPGRYFMAARPFNDAPI---PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVD 359 (564)
Q Consensus 283 ~pg~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d 359 (564)
.+|.||+|||....... ....+.+.-|+. .... ..+|
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~--~~~~--------------------------------------~~~d 169 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYGALVVR--RQGD--------------------------------------LLPK 169 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEEEEEEE--CTTC--------------------------------------CCCS
T ss_pred CceeEEEecCCcccccchhhhcccccceEEEe--cccc--------------------------------------cCcc
Confidence 35999999985321110 011222222222 1000 0124
Q ss_pred eEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCCCCCCCCcCCCCce
Q 008484 360 RKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRAT 439 (564)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (564)
+++.+.+. .|.+|++.+ ...
T Consensus 170 ~e~~l~~~---------------~~~~Ng~~~---------------------------------------------~~~ 189 (299)
T 3t9w_A 170 RQFTVVFN---------------DMMINNRAH---------------------------------------------HDA 189 (299)
T ss_dssp EEEEEEEE---------------TTEETTCCT---------------------------------------------TCC
T ss_pred ccceeeee---------------eeeecCccc---------------------------------------------ccc
Confidence 55544321 155665421 013
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEE---EEEE
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWT---AIRF 516 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~---~irf 516 (564)
..+.++.|++|+|+|.|.+ ...||||||||.|+|+..+... .....+.++||+.|.|+... +++|
T Consensus 190 p~l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 190 PTFEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp CEEEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEECCTTCEEEEEEETT
T ss_pred ccceecCCCEEEEEEEecc---ccceeeeEecceEEEEeccccc---------CCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 4577899999999999976 5789999999999998775322 22334568999999998654 4555
Q ss_pred EecCceeeEEEeechhchhcccEEEEEEecCCC
Q 008484 517 RADNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 549 (564)
Q Consensus 517 ~adnpG~wl~HCHil~H~d~GM~~~~~V~~~~~ 549 (564)
+++|||.|+|||||++|++.|||+.|+|.+...
T Consensus 258 ~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 678999999999999999999999999986544
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.94 E-value=1.7e-26 Score=232.74 Aligned_cols=216 Identities=17% Similarity=0.212 Sum_probs=151.3
Q ss_pred eeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCC------------
Q 008484 215 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ------------ 282 (564)
Q Consensus 215 ~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~------------ 282 (564)
.|+|++++|+++++++.|.. ....++|.||..+.. +.||... ..-.|.||++++..+++..
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTM-DVPVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECC-CCCccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 38999999999999999998 456679999986643 5799754 1224789999998887653
Q ss_pred CCceeEEEEeecCCCCC---CCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCCCCcCcc
Q 008484 283 KPGRYFMAARPFNDAPI---PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVD 359 (564)
Q Consensus 283 ~pg~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d 359 (564)
..|.||+|||....... ....+.+.-||. .... ..+|
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~--~~~~--------------------------------------~~~d 153 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVR--RKGD--------------------------------------VLPD 153 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEE--CTTC--------------------------------------BCCS
T ss_pred CceEEEEeecCcccccchhhhhccccCceEee--cccc--------------------------------------cccc
Confidence 24899999995321100 011222333322 1000 0124
Q ss_pred eEEEEEEccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCCCCCCCCcCCCCce
Q 008484 360 RKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRAT 439 (564)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (564)
+++.+.+. .|++|+..+ ...
T Consensus 154 ~e~~l~~~---------------d~t~Ng~~~---------------------------------------------~~~ 173 (313)
T 3tas_A 154 RTHTIVFN---------------DMTINNRPA---------------------------------------------HTG 173 (313)
T ss_dssp EEEEEEEE---------------TTEETTCCT---------------------------------------------TCC
T ss_pred ccceeecc---------------chhcccCCc---------------------------------------------ccc
Confidence 55544321 155665321 012
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEe-
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA- 518 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a- 518 (564)
+.+.++.|++|+|+|.|.+ ...||||||||.|+|+..+... .....+.++||+.|.|++...+++.+
T Consensus 174 ~~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 174 PDFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp CCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEECTTCEEEEEEETT
T ss_pred cccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEeCCCcceEEEEEec
Confidence 3467789999999999976 6799999999999998765221 12345789999999999888777764
Q ss_pred --cCceeeEEEeechhchhcccEEEEEEecCCC
Q 008484 519 --DNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 549 (564)
Q Consensus 519 --dnpG~wl~HCHil~H~d~GM~~~~~V~~~~~ 549 (564)
+|||.|+|||||++|++.|||+.|+|.++..
T Consensus 242 ~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 242 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred cCCCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 6999999999999999999999999987554
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.88 E-value=2.1e-24 Score=216.73 Aligned_cols=236 Identities=12% Similarity=0.082 Sum_probs=134.8
Q ss_pred EEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcc-c---ceEecEEEECCCce
Q 008484 198 HTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-K---PFTTEAILIAPGQT 273 (564)
Q Consensus 198 ~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~-~---p~~~d~v~l~pg~r 273 (564)
.++||..+ |+|++++|+++++|+.|.. ...+++|.||..+.. +.||... . +...+...|.||++
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECS-SSCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECC-CCcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCe
Confidence 45788766 7899999999999999987 566778999887432 6899864 1 22333578999999
Q ss_pred EEEEEEeCCCC---------ceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhccc
Q 008484 274 TNVLVQANQKP---------GRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRS 344 (564)
Q Consensus 274 ~dv~v~~~~~p---------g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~ 344 (564)
++..+++++.+ |+||+|+|...... ..+.+.+ ++|.......... +..+.
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q-~~~GL~G-~liV~~~~~~~~~---~~~~~---------------- 178 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED-FNSGLIG-PLLICKKGTLTED---GTQKM---------------- 178 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH-HHTTCCE-EEEEECTTCBCTT---SSBSS----------------
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchhh-hccCceE-EEEEccCCCCCcc---CCcCc----------------
Confidence 99999998743 69999999421000 0123333 3444432111000 00000
Q ss_pred CCCCCCCCCCCcCcceEEEEEEc-cCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCC
Q 008484 345 LNSPKFPADVPQKVDRKLFYTIG-FGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFN 423 (564)
Q Consensus 345 l~~~~~p~~~p~~~d~~~~~~~~-~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~ 423 (564)
.|+++.+.+. +.... +......-.+.+||+.|.
T Consensus 179 -------------~d~e~~l~~~d~d~~~--~~~~~~~~~~~ING~~~~------------------------------- 212 (306)
T 1sdd_A 179 -------------FEKQHVLMFAVFDESK--SWNQTSSLMYTVNGYVNG------------------------------- 212 (306)
T ss_dssp -------------SCCCCCCBCCEEETTS--SSSCCCCEEECSSSCCSS-------------------------------
T ss_pred -------------ccceEEEEEEeccccc--ccccCCCcceeeCCEecC-------------------------------
Confidence 0000000000 00000 000000111344543220
Q ss_pred CCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCccee
Q 008484 424 YTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNT 503 (564)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDT 503 (564)
..+.+.++.|++++|.|.|.+. ....||||+||+.|++ . +.++||
T Consensus 213 --------------~~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----d----------------G~~~dt 257 (306)
T 1sdd_A 213 --------------TMPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----N----------------HHKISA 257 (306)
T ss_dssp --------------CCCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----T----------------TEECSC
T ss_pred --------------CCcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----C----------------CEEcce
Confidence 0123566789999999999761 1257999999999976 1 135899
Q ss_pred eEecCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEecC
Q 008484 504 AAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 547 (564)
Q Consensus 504 v~vp~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~ 547 (564)
+.|.||+.+.|+|++++||.|+||||+++|++.|||+.|.|.+.
T Consensus 258 v~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 258 ITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp CCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred EEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 99999999999999999999999999999999999999998753
No 47
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.87 E-value=1.3e-21 Score=198.30 Aligned_cols=237 Identities=19% Similarity=0.192 Sum_probs=157.1
Q ss_pred ceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCC-CeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceE
Q 008484 196 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 274 (564)
Q Consensus 196 ~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~ 274 (564)
..+++||+. ..|+|++++|++++||++|.... ..+++|+||.. +.||... ...|.||+++
T Consensus 59 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDV---------PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 578999984 23899999999999999999753 57789999864 5788632 2248999999
Q ss_pred EEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCCC
Q 008484 275 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADV 354 (564)
Q Consensus 275 dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~ 354 (564)
++.+++++ +|+||+|||..........++.+ +++..... ..|.
T Consensus 120 ~y~f~~~~-~Gt~wyH~h~~~~~~~~~~Gl~G-~~iV~~~~---------~~p~-------------------------- 162 (327)
T 1kbv_A 120 TFSFKALQ-PGLYIYHCAVAPVGMHIANGMYG-LILVEPKE---------GLPK-------------------------- 162 (327)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHHHTTCEE-EEEEECTT---------CCCC--------------------------
T ss_pred EEEEECCC-CeEEEEEeCCCChhhhhhcceEE-EEEEecCC---------CCCC--------------------------
Confidence 99999998 79999999853210000112222 33333211 0111
Q ss_pred CcCcceEEEEEEc-cCCCCCCcccCC------------ceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCC
Q 008484 355 PQKVDRKLFYTIG-FGKDSCPTCVNG------------TRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKP 421 (564)
Q Consensus 355 p~~~d~~~~~~~~-~~~~~~~~~~~g------------~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~ 421 (564)
.|+++.+.+. ....+. ....| ..-.+.+||+.+
T Consensus 163 ---~d~e~~l~~~d~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~iNG~~~------------------------------ 208 (327)
T 1kbv_A 163 ---VDKEFYIVQGDFYTKGK-KGAQGLQPFDMDKAVAEQPEYVVFNGHVG------------------------------ 208 (327)
T ss_dssp ---CSEEEEEEEEEECBSSC-TTCCEEECBCHHHHHHTCCSEEEETTSTT------------------------------
T ss_pred ---CceEEEEEeeeeeccCc-cccccccccChhHhccCCCceEEEcCccc------------------------------
Confidence 1111111100 000000 00000 000122222110
Q ss_pred CCCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcc
Q 008484 422 FNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIER 501 (564)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~r 501 (564)
+. .....+.++.|++++|.|.|.+ ....|+||+|||.|+||+...+ +..|.++
T Consensus 209 --------~~-----~~~~~l~v~~G~~vRlRliN~~--~~~~~~~~l~Gh~f~vi~~DG~------------~~~p~~~ 261 (327)
T 1kbv_A 209 --------AL-----TGDNALKAKAGETVRMYVGNGG--PNLVSSFHVIGEIFDKVYVEGG------------KLINENV 261 (327)
T ss_dssp --------TT-----SGGGCEEEETTEEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGS------------SCEECSB
T ss_pred --------CC-----CCceeEEeCCCCEEEEEEECCC--CCCceeEEEeCCEEEEEEcCCC------------cCCCCce
Confidence 00 0124578899999999999975 3568999999999999998532 1236789
Q ss_pred eeeEecCCCEEEEEEEecCceeeEEEeechhch-hcccEEEEEEecCCC
Q 008484 502 NTAAVPTGGWTAIRFRADNPGVWFMHCHLELHT-GWGLKTAFAVEDGPG 549 (564)
Q Consensus 502 DTv~vp~~g~~~irf~adnpG~wl~HCHil~H~-d~GM~~~~~V~~~~~ 549 (564)
|++.|.+|+...|.|++++||.|++|||+.+|. ..||++++.|.....
T Consensus 262 d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 262 QSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 310 (327)
T ss_dssp SEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred eEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCCCC
Confidence 999999999999999999999999999999995 899999999975544
No 48
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.87 E-value=7.8e-22 Score=218.28 Aligned_cols=245 Identities=15% Similarity=0.199 Sum_probs=142.2
Q ss_pred eeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCccc---c-eEecEEEECCCceEEEEEEeCCC-----Cc-
Q 008484 216 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK---P-FTTEAILIAPGQTTNVLVQANQK-----PG- 285 (564)
Q Consensus 216 ~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~---p-~~~d~v~l~pg~r~dv~v~~~~~-----pg- 285 (564)
|+|++++|+++++|+.|... ...++|.||.... .+.||.+.. | ..+....|.||++++..+++++. +|
T Consensus 69 P~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~ 146 (647)
T 1sdd_B 69 PVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGS 146 (647)
T ss_dssp CCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSSC
T ss_pred ceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCC
Confidence 89999999999999999984 5667999998764 478998541 1 22345679999999999999884 47
Q ss_pred ---eeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCCCCcCcceEE
Q 008484 286 ---RYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKL 362 (564)
Q Consensus 286 ---~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d~~~ 362 (564)
+||+|+|...... ....+.+ ++|.......... +..| . .++++
T Consensus 147 ~c~T~wYHsH~~~~~q-~~~GL~G-~lIV~~~~~~~~~---~~~~----------------------------~-~~~e~ 192 (647)
T 1sdd_B 147 ACRAWAYYSAVNPEKD-IHSGLIG-PLLICRKGTLDKE---TNMP----------------------------V-DMREF 192 (647)
T ss_dssp SEEEEEEECCSSHHHH-HTTTCEE-EEEEECTTSSCTT---SCCC----------------------------S-SCCEE
T ss_pred CceEEEEccCCCCccc-ccccCcc-CEEEeeCCCcccc---cCCC----------------------------C-cceeE
Confidence 9999999521000 0122333 3333322111000 0000 0 01122
Q ss_pred EEEEc-cCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCCCCCCCCcCCCCceee
Q 008484 363 FYTIG-FGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRL 441 (564)
Q Consensus 363 ~~~~~-~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (564)
.+.+. +.. + .+|......-. . + ......+. ..+..+..+|. .. ..+.
T Consensus 193 ~l~l~~~d~-------~----------~~w~~~~~~~~-~-~----~~~~~~~~-~~~~~~~iNG~-------~~-~~p~ 240 (647)
T 1sdd_B 193 VLLFMVFDE-------K----------KSWYYDKKPTR-S-W----RRASSEVK-NSHEFHAINGM-------IY-NLPG 240 (647)
T ss_dssp EEEEEEEEG-------G----------GSSCCC----------------------CCCEEEEETTB-------SS-CCCC
T ss_pred EEEEEeecC-------c----------cccccccCccc-c-c----ccCCcchh-hcCceeccCCE-------ec-CCCC
Confidence 11111 000 0 00000000000 0 0 00000000 00011111221 00 1345
Q ss_pred EEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEecCc
Q 008484 442 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNP 521 (564)
Q Consensus 442 ~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnp 521 (564)
+.++.|++|+|+|.|.+ ...+.||||+|||.|+|++.. +.++||+.|.||+.+.|+|++++|
T Consensus 241 l~v~~G~~vrlrliN~~-~~~~~h~~hlhG~~f~vi~~d-----------------~~~~d~v~l~pg~r~~v~~~~~~p 302 (647)
T 1sdd_B 241 LRMYEQEWVRLHLLNLG-GSRDIHVVHFHGQTLLENGTQ-----------------QHQLGVWPLLPGSFKTLEMKASKP 302 (647)
T ss_dssp CEEETTCEEEEEEEECC-CTTCCEEEEETTCCEEECSSS-----------------CEEESSEEECTTEEEEEEEECCSS
T ss_pred eEEcCCCEEEEEEEeCC-CCCcceeEEEcCcEEEEecCC-----------------CcccceEEECCCeEEEEEEEeccc
Confidence 67889999999999975 113589999999999998642 457999999999999999999999
Q ss_pred eeeEEEeechhchhcccEEEEEEec
Q 008484 522 GVWFMHCHLELHTGWGLKTAFAVED 546 (564)
Q Consensus 522 G~wl~HCHil~H~d~GM~~~~~V~~ 546 (564)
|.|+||||+++|++.|||+.|.|.+
T Consensus 303 G~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 303 GWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred eEeecccCcccccccccccceeeec
Confidence 9999999999999999999999964
No 49
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.86 E-value=9.6e-21 Score=193.44 Aligned_cols=263 Identities=19% Similarity=0.177 Sum_probs=151.2
Q ss_pred ceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCC-CCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceE
Q 008484 196 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAAL-NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 274 (564)
Q Consensus 196 ~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~ 274 (564)
..+++||+. ..|+|++++|+++|+|++|... ...|.+++++... +.||..+ . .|.||+++
T Consensus 60 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~-----~--~i~PG~~~ 120 (340)
T 2bw4_A 60 HAMTFNGSV---------PGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL-----T--QVNPGEET 120 (340)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCTTEEE
T ss_pred EEEEECCCC---------CCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc-----e--EeCCCCEE
Confidence 678999984 2289999999999999999973 3456778887652 2334322 1 39999999
Q ss_pred EEEEEeCCCCceeEEEEeecCC-CCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCC
Q 008484 275 NVLVQANQKPGRYFMAARPFND-APIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPAD 353 (564)
Q Consensus 275 dv~v~~~~~pg~y~l~~~~~~~-~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~ 353 (564)
+..+++++ +|+||+|||.... .......+.+. ++......... . + .
T Consensus 121 ~y~~~~~~-~Gt~wyH~h~~~~~~~~~~~Gl~G~-~iV~~~~~~~~-----~-------------------~-------~ 167 (340)
T 2bw4_A 121 TLRFKATK-PGVFVYHCAPEGMVPWHVTSGMNGA-IMVLPRDGLKD-----E-------------------K-------G 167 (340)
T ss_dssp EEEEECCS-CEEEEEECCCTTCHHHHHHTTCEEE-EEEECTBCEEC-----T-------------------T-------S
T ss_pred EEEEECCC-CeEEEEEcCCCCchhhHHhCcCEEE-EEEccCcCccc-----c-------------------c-------C
Confidence 99999998 7999999995310 00001223333 33322110000 0 0 0
Q ss_pred CCcCcceEEEEEE-ccCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCCCCCCCC
Q 008484 354 VPQKVDRKLFYTI-GFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTAS 432 (564)
Q Consensus 354 ~p~~~d~~~~~~~-~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 432 (564)
.|...|+.+.+.+ +...... .+|. +. .|..+....-..... ..+. .+..+..||....
T Consensus 168 ~p~~~d~e~~l~l~D~~~~~~---~~g~-~~------~~~~~~~~~~~~~~~-~~~~--------~~~~~~iNG~~~~-- 226 (340)
T 2bw4_A 168 QPLTYDKIYYVGEQDFYVPKD---EAGN-YK------KYETPGEAYEDAVKA-MRTL--------TPTHIVFNGAVGA-- 226 (340)
T ss_dssp CEECCSEEEEEEEEEECCCBC---TTSC-BC------CCCSHHHHHHHHHHH-HHTT--------CCSEEEETTSTTT--
T ss_pred CCcCcceeEEEeeeeeeeccc---cCCc-cc------ccccccccccchhhH-hhcC--------CCCEEEECCccCC--
Confidence 0111233332211 0000000 0000 00 000000000000000 0000 0001112222000
Q ss_pred cCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCC-cceeeEecCCCE
Q 008484 433 LGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPI-ERNTAAVPTGGW 511 (564)
Q Consensus 433 ~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~-~rDTv~vp~~g~ 511 (564)
......+.++.|++++|++.|.+ ...|++|+|||.|+|+.. |.+ +..|. ++||+.|.+|+.
T Consensus 227 ---~~~~~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d--G~~----------~~~p~~~~dtv~l~pGer 288 (340)
T 2bw4_A 227 ---LTGDHALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT--GKF----------RNPPDLDQETWLIPGGTA 288 (340)
T ss_dssp ---TSGGGCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT----------TSCCEEEESCCCBCTTEE
T ss_pred ---ccCCCceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC--Ccc----------cCCccccceEEEeCCCce
Confidence 00135678899999998877743 568899999999999863 221 11222 479999999999
Q ss_pred EEEEEEecCceeeEEEeech-hchhcccEEEEEEecCCC
Q 008484 512 TAIRFRADNPGVWFMHCHLE-LHTGWGLKTAFAVEDGPG 549 (564)
Q Consensus 512 ~~irf~adnpG~wl~HCHil-~H~d~GM~~~~~V~~~~~ 549 (564)
+.|.|++++||.|+||||++ +|++.|||+.|+|.....
T Consensus 289 ~~v~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 289 GAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEEEEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 99999999999999999999 599999999999986554
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.83 E-value=1.9e-19 Score=183.21 Aligned_cols=95 Identities=22% Similarity=0.220 Sum_probs=74.3
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCC-cceeeEecCCCEEEEEEEe
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPI-ERNTAAVPTGGWTAIRFRA 518 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~-~rDTv~vp~~g~~~irf~a 518 (564)
..+.++.|++++|++.|.+ ...|++++|+|.|.|++. |.+- ..|. ++||+.|.+|+.+.|.|++
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~---~~~~~h~i~~h~~~Vi~d--G~~~----------~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPN---RDSRPHLIGGHGDLVWET--GKFH----------NAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCTT----------SCCEEEESBCCBCTTEEEEEEEEC
T ss_pred cceEecCCCEEEEEECCCC---CccccEEECCCCeEEEeC--Cccc----------CCCccCcceEEECCCceEEEEEEc
Confidence 4578899999998776643 333444577788888863 3221 1122 5899999999999999999
Q ss_pred cCceeeEEEeechhch-hcccEEEEEEecCCC
Q 008484 519 DNPGVWFMHCHLELHT-GWGLKTAFAVEDGPG 549 (564)
Q Consensus 519 dnpG~wl~HCHil~H~-d~GM~~~~~V~~~~~ 549 (564)
++||.|+||||++.|+ +.|||++|+|.....
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 9999999999999997 999999999986544
No 51
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.82 E-value=2.1e-21 Score=216.25 Aligned_cols=244 Identities=11% Similarity=0.110 Sum_probs=149.0
Q ss_pred eeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCC---------CCce
Q 008484 216 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ---------KPGR 286 (564)
Q Consensus 216 ~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~---------~pg~ 286 (564)
|+|+++.|+++++++.|.. ....++|.||..+....-||+.- ....|.||++++..+++++ .+|+
T Consensus 199 P~Ir~~~GD~v~v~~~N~l-~~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt 272 (770)
T 2r7e_B 199 PYIRAEVEDNIMVTFRNQA-SRPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKA 272 (770)
T ss_dssp CCCCCCSSSCEEEEEECCS-SSCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEE
T ss_pred CeEEEEcCCEEEEEEEECC-CCCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCee
Confidence 8999999999999999997 46677999998776554458742 1246899999999999884 3699
Q ss_pred eEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCCCCcCcceEEEEEE
Q 008484 287 YFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTI 366 (564)
Q Consensus 287 y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~p~~~d~~~~~~~ 366 (564)
||+|+|...... ...++.+.-||. .. ....+ . ..+...++++.+.+
T Consensus 273 ~wYHsh~~~~~q-~~~GL~G~liV~-~~-~~~~~----~---------------------------~~~~~~d~E~vl~~ 318 (770)
T 2r7e_B 273 WAYSSDVDLEKD-VHSGLIGPLLVC-HT-NTLNP----A---------------------------HGRQVTVQEFALFF 318 (770)
T ss_dssp EEECCCSSSSHH-HHTSCCEEEEEE-CS-TTSCS----S---------------------------SCCCCSSEEEECCC
T ss_pred EEeeccCCcHHH-HhCCceeeEEEC-CC-ccccc----c---------------------------cCCCccceEEEEEE
Confidence 999999532100 012233333332 21 11000 0 00001223332211
Q ss_pred c-cCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccc---cCCCCCCCCCCCCCCCCCCCCCcCCCCceeeE
Q 008484 367 G-FGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVF---KADFPDKPPKPFNYTGAPLTASLGTSRATRLS 442 (564)
Q Consensus 367 ~-~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (564)
. +.. + .+|+.... +.. +....... ...|.. ....+..+|. .......+
T Consensus 319 ~~~de-------~----------~swy~~~~--~~~-~~~~p~~~~~~d~~~~~-~~~~~~ING~-------~~~~~~~l 370 (770)
T 2r7e_B 319 TIFDE-------T----------KSWYFTEN--MER-NCRAPCNIQMEDPTFKE-NYRFHAINGY-------IMDTLPGL 370 (770)
T ss_dssp CEECC-------S----------SSSCTTGG--GSS-CSCCSSCCCSSSSSSTT-TSCEECTTSC-------TTTTCCCC
T ss_pred eecCc-------c----------ccchhccc--hhh-cccCccccccCCccccc-cCCccccCCc-------cCCCCCCe
Confidence 0 000 0 01100000 000 00000000 000000 0001112221 11124556
Q ss_pred EeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEecCce
Q 008484 443 KIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 522 (564)
Q Consensus 443 ~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG 522 (564)
.++.|++|+|+|.|.+. ....||||||||.|+|++.+ +.++||+.|.|++++.|+|++|+||
T Consensus 371 ~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad~pG 432 (770)
T 2r7e_B 371 VMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPSKAG 432 (770)
T ss_dssp CCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCSSCB
T ss_pred EEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeCCCC
Confidence 78999999999999751 24589999999999998763 2389999999999999999999999
Q ss_pred eeEEEeechhchhcccEEEEEEe
Q 008484 523 VWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 523 ~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.|+||||+++|++.|||+.|.|.
T Consensus 433 ~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 433 IWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp CCCBCCCSHHHHTTBCCCCCCBC
T ss_pred ceEEEeccccccccccccccccc
Confidence 99999999999999999999884
No 52
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.81 E-value=3.4e-19 Score=188.55 Aligned_cols=249 Identities=17% Similarity=0.193 Sum_probs=156.4
Q ss_pred ceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCC-CCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceE
Q 008484 196 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAAL-NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 274 (564)
Q Consensus 196 ~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~ 274 (564)
..+++||+. ..|.|++++|++++||+.|... ...+++|+||+. ..||.. ++..|.||+++
T Consensus 49 ~~~~~ng~~---------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~------~~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETV---------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGA------ESSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGG------GGCCBCTTCEE
T ss_pred EEEEECCcC---------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCC------ccEEECCCCEE
Confidence 678999985 2389999999999999999964 357789999975 468763 23368999999
Q ss_pred EEEEEeCCCCceeEEEEeecCCCCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCCC
Q 008484 275 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADV 354 (564)
Q Consensus 275 dv~v~~~~~pg~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~~ 354 (564)
++.|++++ +|+||+|||..........++ .+.+.+..... .|.
T Consensus 110 ~y~f~~~~-~Gt~~yH~H~~~~~~~~~~Gl--~G~~iv~~~~~--------~~~-------------------------- 152 (442)
T 2zoo_A 110 TFNFKALN-PGLYIYHCATAPVGMHIANGM--YGLILVEPKEG--------LAP-------------------------- 152 (442)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHHHTTC--EEEEEEECTTC--------CCC--------------------------
T ss_pred EEEEEcCC-CeEEEEecCCCChHHHHhCcc--EEEEEEeCCCC--------CCC--------------------------
Confidence 99999988 799999997421100001122 23333332110 010
Q ss_pred CcCcceEEEEEEc-cCCCCCCcccCCceeeeeecceeeecCcchhhhhhhccccccccCCCCCCCCCCCCCCCCCCCCCc
Q 008484 355 PQKVDRKLFYTIG-FGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASL 433 (564)
Q Consensus 355 p~~~d~~~~~~~~-~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (564)
.|+++.+.+. ...... .+.. . . ..+. + .. ..+ ..+..+..||...+
T Consensus 153 ---~d~e~~l~l~d~~~~~~----~~~~-~--~--~~~~-----~-~~----~~~--------~~~~~~liNG~~~~--- 199 (442)
T 2zoo_A 153 ---VDREYYLVQGDFYTKGE----FGEA-G--L--QPFD-----M-AK----AID--------EDADYVVFNGSVGS--- 199 (442)
T ss_dssp ---CSEEEEEEEEEECBSSC----TTCC-E--E--ECBC-----H-HH----HHT--------TCCSEEEETTSTTT---
T ss_pred ---CCceEEEEeeeeeccCc----cccc-c--c--ccCC-----h-hH----hcc--------CCCCEEEECCCcCC---
Confidence 1122211110 000000 0000 0 0 0000 0 00 000 00001111121000
Q ss_pred CCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEE
Q 008484 434 GTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTA 513 (564)
Q Consensus 434 ~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~ 513 (564)
......+.++.|++++|.|.|.+ ....|+||+||+.|.|++...+ ...|.+.|++.|.||+...
T Consensus 200 --~~~~~~l~v~~G~~vrlrliN~~--~~~~~~~~i~g~~~~vi~~DG~------------~~~p~~~~~~~l~pg~r~~ 263 (442)
T 2zoo_A 200 --TTDENSLTAKVGETVRLYIGNGG--PNLVSSFHVIGEIFDTVYVEGG------------SLKNHNVQTTLIPAGGAAI 263 (442)
T ss_dssp --TSGGGCEEEETTCEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGS------------SCEECSBSEEEECTTEEEE
T ss_pred --CCCCCceEeCCCCEEEEEEEeCC--CCCceeeEEcCCEEEEEecCCc------------cCCCccceEEEECCCeeEE
Confidence 00124578899999999999975 3568999999999999988422 1236789999999999999
Q ss_pred EEEEecCceeeEEEeechhc-hhcccEEEEEEecCCC
Q 008484 514 IRFRADNPGVWFMHCHLELH-TGWGLKTAFAVEDGPG 549 (564)
Q Consensus 514 irf~adnpG~wl~HCHil~H-~d~GM~~~~~V~~~~~ 549 (564)
|.|+++.||.|++|||...| .+.||++.|.|.....
T Consensus 264 v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 264 VEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 99999999999999999999 5999999999976543
No 53
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.80 E-value=2.7e-18 Score=174.93 Aligned_cols=272 Identities=17% Similarity=0.192 Sum_probs=156.3
Q ss_pred ceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCC-CCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceE
Q 008484 196 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAAL-NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 274 (564)
Q Consensus 196 ~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~ 274 (564)
..+++||+. ..|+|++++|+++++|+.|... ...|.+++|++.. .||.. +. . .|.||+++
T Consensus 54 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~~ 114 (336)
T 1oe1_A 54 QAMTFNGSM---------PGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQA 114 (336)
T ss_dssp EEEEETTBS---------SCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCEE
Confidence 678999984 2289999999999999999874 2567789998763 33331 11 1 39999999
Q ss_pred EEEEEeCCCCceeEEEEeecCC-CCCCCCCCceEEEEEEccCCCCCCCCCCCCCCCCChhhhhhhhhhcccCCCCCCCCC
Q 008484 275 NVLVQANQKPGRYFMAARPFND-APIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPAD 353 (564)
Q Consensus 275 dv~v~~~~~pg~y~l~~~~~~~-~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~p~~ 353 (564)
+..+++++ +|+||+|||.... .......+.+.-+++... .. +. .. .
T Consensus 115 ~y~f~~~~-~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~-~~---------~~---------------~~-------~ 161 (336)
T 1oe1_A 115 TLRFKADR-SGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRD-GL---------KD---------------PQ-------G 161 (336)
T ss_dssp EEEEECCS-CEEEEEECCCTTCHHHHHHTTCEEEEEEECTT-CC---------BC---------------TT-------S
T ss_pred EEEEECCC-CeEEEEecCCCCchhHHHhCCCeEEEEEecCc-CC---------cc---------------cc-------c
Confidence 99999988 7999999995311 000012233333333111 00 00 00 0
Q ss_pred CCcCcceEEEEEE-ccCCCCCCcccCCceeeeeecceeeecCcch---hhhhhhccccccccCCCCCCCCCCCCCCCCCC
Q 008484 354 VPQKVDRKLFYTI-GFGKDSCPTCVNGTRLLATLNNISFVMPQTA---LLQAHYFNLKGVFKADFPDKPPKPFNYTGAPL 429 (564)
Q Consensus 354 ~p~~~d~~~~~~~-~~~~~~~~~~~~g~~~~~~~n~~s~~~p~~~---~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 429 (564)
.|...|+++.+.+ +..... ..+|. +. +|..+... .+... .+ ..+..+..||...
T Consensus 162 ~~~~~D~e~~l~~~D~~~~~---~~~g~-~~------~~~~~~~~~~~~~~~~----~~--------~~~~~~liNG~~~ 219 (336)
T 1oe1_A 162 KPLHYDRAYTIGEFDLYIPK---GPDGK-YK------DYATLAESYGDTVQVM----RT--------LTPSHIVFNGKVG 219 (336)
T ss_dssp CBCCCSEEEEEEEEEECCCB---CTTSS-BC------CCSSTGGGHHHHHHHH----HT--------TCCSEEEETTSTT
T ss_pred CcccCCceeEeeeeeeeecc---ccCCc-ee------ecccccccccchhhHh----hc--------CCCCEEEECCeec
Confidence 1112344443322 110000 00010 00 01111000 00000 00 0001112222200
Q ss_pred CCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCC--cceeeEec
Q 008484 430 TASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPI--ERNTAAVP 507 (564)
Q Consensus 430 ~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vp 507 (564)
. ..+...+.++.|++++|+..+.+ ...+++++|||.|.|+. .|.+ ..|. +.||+.|+
T Consensus 220 ~-----~~~~~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~--DG~~-----------~~p~~~~~dtv~i~ 278 (336)
T 1oe1_A 220 A-----LTGANALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE--TGKF-----------ANPPQRDLETWFIR 278 (336)
T ss_dssp T-----TSGGGCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET--TCCT-----------TSCCEEEESBCCBC
T ss_pred c-----CCCCcceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC--CCcC-----------cCCccccceEEEEC
Confidence 0 01135688999999998655532 34566667999999985 3321 2232 46999999
Q ss_pred CCCEEEEEEEecCceeeEEEeechhch-hcccEEEEEEecCCCCCC-CCCCCCCCCC
Q 008484 508 TGGWTAIRFRADNPGVWFMHCHLELHT-GWGLKTAFAVEDGPGPDQ-SVLPPPTDLP 562 (564)
Q Consensus 508 ~~g~~~irf~adnpG~wl~HCHil~H~-d~GM~~~~~V~~~~~~~~-~~~~~p~~~~ 562 (564)
+|+...+.+++++||.|+||||.+.|. +.||++.|.|.....+.. .....|.-+|
T Consensus 279 pGer~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~~~~~~~~~~~~~~ 335 (336)
T 1oe1_A 279 GGSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIP 335 (336)
T ss_dssp TTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTTTCCCSSCSCCCC
T ss_pred CCCcEEEEEEcCCCceEEEEechhhccccCCCeEEEEECCCCChHHhccCCCCCCCC
Confidence 999999999999999999999999985 999999999986655332 2333444343
No 54
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.80 E-value=2.7e-18 Score=181.34 Aligned_cols=236 Identities=13% Similarity=0.123 Sum_probs=152.8
Q ss_pred eEEEEEEEEEEEeecCC-----------ceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCC-ceeee-CCCCCCCCC
Q 008484 32 IKKYQFDVQVKNVSRLC-----------HAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHW-HGLKQYRNG 98 (564)
Q Consensus 32 ~~~~~l~~~~~~~~~~g-----------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~-~~iH~-HG~~~~~~~ 98 (564)
.+++.|.++.-....+| .....+++||+. .|+|+|++| ++|+||.|..... ..+|+ ||....-..
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 45677777765444333 345789999996 699999999 9999999998654 56888 786543222
Q ss_pred CCCCCCC-----ccccccCCCCeEEEEEEeCCCCcceeEecchhhhhcce-e-----------eeE-EEeCCCCCCCCCC
Q 008484 99 WADGPAY-----ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATV-Y-----------GAI-VIMPKPGSPFPFP 160 (564)
Q Consensus 99 ~~DGv~~-----~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~~Gl-~-----------G~i-iV~~~~~~~~~~~ 160 (564)
.||.+. +....|.||||+++.+++ .+.|+||++++......|+ . .++ -.........+
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 788542 456789999999999998 5689999998865432221 1 111 11111100000
Q ss_pred CCCCcEEEEeecccccCHH-HHHHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeE
Q 008484 161 QPNREEVILLGEWWHTDVE-EVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDEL 239 (564)
Q Consensus 161 ~~~~e~~l~~~d~~~~~~~-~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~ 239 (564)
..+.+..+..+...... .....+... ..++|||+.+.. ..+.+.++.|++++|+|+|. ..|
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~-------~~~~iNg~~f~~------~~~~~~~~~G~~~~~~l~N~---~~H 367 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG-------DDPGINGQLWDV------NRIDVTAQQGTWERWTVRAD---EPQ 367 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC-------SSSSBTTBCCCT------TCCCEEEETTCEEEEEEEEE---EEE
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe-------eEEEECCEeCCC------CCCcEEcCCCCEEEEEEECC---CCc
Confidence 00000000000000000 000000000 046799997631 23568999999999999998 578
Q ss_pred EEEEcCceeEEEeeCCCcc---cceEecEEEECCCceEEEEEEeCCCCce----eEEEEeec
Q 008484 240 FFAIAGHNFTVVEVDAVYT---KPFTTEAILIAPGQTTNVLVQANQKPGR----YFMAARPF 294 (564)
Q Consensus 240 ~~~l~gh~~~via~DG~~~---~p~~~d~v~l~pg~r~dv~v~~~~~pg~----y~l~~~~~ 294 (564)
.||||||.|+|++.||... +|.++|++.| |+++.|.|++++ ||. |++|||..
T Consensus 368 P~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn-pg~~~g~w~~HCHil 426 (451)
T 2uxt_A 368 AFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ-PSWAHFPFYFNSQTL 426 (451)
T ss_dssp EEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS-CCBTTBCEEEEESSH
T ss_pred CeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCC-CCCCCCceEEeCCch
Confidence 9999999999999999865 4788999999 999999999998 576 99999953
No 55
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.80 E-value=2.3e-18 Score=181.55 Aligned_cols=224 Identities=15% Similarity=0.201 Sum_probs=153.9
Q ss_pred CceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCC-CceeeeCCCCCCCCCCCCCCCC-----ccccccCCCCeEEEEE
Q 008484 48 CHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQY-NMSIHWHGLKQYRNGWADGPAY-----ITQCPIKTGNSYTYDF 121 (564)
Q Consensus 48 g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~~~~~~DGv~~-----~~~~~i~PG~~~~y~~ 121 (564)
|.....+++||+. .|+|+|++| ++|+||.|.... ...+|++|....-.. .||.+. +....|.|||+++..+
T Consensus 174 g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~-~DG~~~~~p~~~~~l~l~pgeR~dv~v 250 (439)
T 2xu9_A 174 GKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA-ADGGFLEEPLEVSELLLAPGERAEVLV 250 (439)
T ss_dssp CCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEEESCEEECTTCEEEEEE
T ss_pred CCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe-cCCCCCCCceEeceEEECCceeEEEEE
Confidence 3456789999997 699999999 999999999865 456888887654322 788652 3456799999999999
Q ss_pred EeCCCCcceeEecchhhhh-c---ce--------------eee--EEEeCCCCCCCCCCCCCCcEEEEeecccccCHHHH
Q 008484 122 NVTGQRGTLWWHAHIFWLR-A---TV--------------YGA--IVIMPKPGSPFPFPQPNREEVILLGEWWHTDVEEV 181 (564)
Q Consensus 122 ~~~~~~Gt~wYH~h~~~~~-~---Gl--------------~G~--iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 181 (564)
++ .++|.||++++..... . || ... |.+.... ...+.+.... .+.++......
T Consensus 251 ~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~p~~l~----~~~~l~~~~~~-- 322 (439)
T 2xu9_A 251 RL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP-KPLPLPKALS----PFPTLPAPVVT-- 322 (439)
T ss_dssp EC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC-CCCCCCSCCC----CCCCCCCCSEE--
T ss_pred Ec-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC-ccccCcccCC----CcccCCCCCcc--
Confidence 98 5699999999753211 1 22 112 2222211 1111110000 00000000000
Q ss_pred HHhhh-ccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcc-c
Q 008484 182 EKQGQ-KMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-K 259 (564)
Q Consensus 182 ~~~~~-~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~-~ 259 (564)
.... ..+. .+..++|||+.+.. ..+.+.++.|++++|+|.|.+ ...|+||||||.|+|++.+|... .
T Consensus 323 -r~~~l~~~~---~g~~~~iNg~~~~~------~~~~~~~~~g~~~~~~~~N~~-~~~HP~HLHG~~F~Vl~~~g~~~~~ 391 (439)
T 2xu9_A 323 -RRLVLTEDM---MAARFFINGQVFDH------RRVDLKGQAQTVEVWEVENQG-DMDHPFHLHVHPFQVLSVGGRPFPY 391 (439)
T ss_dssp -EEEEEEEEG---GGTEEEETTBCCCT------TCCCEEECTTCEEEEEEEECS-SSCEEEEESSCCBEEEEETTEECSS
T ss_pred -eEEEEEeec---cCceEeECCEECCC------CCCceecCCCCEEEEEEEcCC-CCCCCceeCCCcEEEEeeCCCCCCC
Confidence 0000 0000 11368999998631 224589999999999999997 56788999999999999999865 6
Q ss_pred ceEecEEEECCCceEEEEEEeCCCCceeEEEEeec
Q 008484 260 PFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 260 p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
|.++||+.|.||+++.+.+++++ ||.|++|||-.
T Consensus 392 p~~rDTv~v~p~~~v~i~f~adn-pG~w~~HCHil 425 (439)
T 2xu9_A 392 RAWKDVVNLKAGEVARLLVPLRE-KGRTVFHCHIV 425 (439)
T ss_dssp CCCBSEEEECTTCEEEEEEECCS-CEEEEEEESSH
T ss_pred CCCeEEEEeCCCCEEEEEEEcCC-CCCEEEECCcc
Confidence 88999999999999999999888 79999999953
No 56
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.73 E-value=3.1e-16 Score=167.94 Aligned_cols=258 Identities=15% Similarity=0.141 Sum_probs=161.2
Q ss_pred EEEEEEEEEEeecCCc-----eeeEEEECCcCC--------CCeEEeecCCEEEEEEEeCCCCC-ceeeeCCCCCCCCCC
Q 008484 34 KYQFDVQVKNVSRLCH-----AKPIVTVNGRFP--------GPTIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNGW 99 (564)
Q Consensus 34 ~~~l~~~~~~~~~~g~-----~~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG~~~~~~~~ 99 (564)
++.|.++.-....++. ....+++||+.. .|+|+|++|+++|+||.|..... ..+|++|....-. .
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi-~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTII-E 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEE-E
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEE-e
Confidence 4555555443333332 256789999763 28999999999999999998654 5688877654432 2
Q ss_pred CCCCCC----ccccccCCCCeEEEEEEeCCCCcceeEecchhhh-------h-cceeeeEEEeCCCCCCCCCCCCCCc-E
Q 008484 100 ADGPAY----ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWL-------R-ATVYGAIVIMPKPGSPFPFPQPNRE-E 166 (564)
Q Consensus 100 ~DGv~~----~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~-------~-~Gl~G~iiV~~~~~~~~~~~~~~~e-~ 166 (564)
.||.+. +....|.||||++..++++..+|.||.+++.... . .++..+++.........+....... .
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~ 301 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPA 301 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSCC
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCccC
Confidence 788542 3356689999999999985557999999875311 1 2343344433222111110000000 0
Q ss_pred EEEeecccccCHHHH----H---Hh-hhccCCCCCCCceEEEcCcCCCCCCC-------------C--CCCeeeEEEecC
Q 008484 167 VILLGEWWHTDVEEV----E---KQ-GQKMGLPPNMSDAHTINGKPGPLFPC-------------S--EKHTFAMEVESG 223 (564)
Q Consensus 167 ~l~~~d~~~~~~~~~----~---~~-~~~~g~~~~~~~~~~iNG~~~~~~~~-------------~--~~~~~~l~~~~G 223 (564)
.+-..+......... . .. ....... ..+..++|||+.+....- . ......++++.|
T Consensus 302 ~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g 380 (503)
T 1hfu_A 302 QLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRN 380 (503)
T ss_dssp BCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSS
T ss_pred CCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCC
Confidence 000000000000000 0 00 0000000 011268899998632100 0 012357899999
Q ss_pred cEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcc----cceEecEEEE-CCCceEEEEEEeCCCCceeEEEEeec
Q 008484 224 KTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT----KPFTTEAILI-APGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 224 ~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~----~p~~~d~v~l-~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
++++++++|......|+||||||.|+|++.+|... .|..+||+.| .+|+++.+.|++++ ||.|++|||..
T Consensus 381 ~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adn-PG~W~~HCHil 455 (503)
T 1hfu_A 381 QVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN-PGPWFFHCHIE 455 (503)
T ss_dssp CEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS-CEEEEEEESSH
T ss_pred CEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCC-CeeeeEecCch
Confidence 99999999655467889999999999999998752 6889999999 89999999999998 79999999953
No 57
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.73 E-value=2.8e-16 Score=168.96 Aligned_cols=238 Identities=16% Similarity=0.197 Sum_probs=152.9
Q ss_pred eeEEEECCcCC---------CCeEEeecCCEEEEEEEeCCCCC-ceeeeCCCCCCCCCCCCCCCC----ccccccCCCCe
Q 008484 51 KPIVTVNGRFP---------GPTIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNS 116 (564)
Q Consensus 51 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG~~~~~~~~~DGv~~----~~~~~i~PG~~ 116 (564)
...+++||+.. -|+|+|++|+++|+||.|..... ..+|++|....-.. .||.+. +....|.||||
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 46789999753 18999999999999999998754 56888886554322 788542 34567899999
Q ss_pred EEEEEEeCCCCcceeEecchhhh---h-cceeeeEEEeCCCCCCCCCCCCCCcEEEEeeccccc---CH-H-----HHHH
Q 008484 117 YTYDFNVTGQRGTLWWHAHIFWL---R-ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHT---DV-E-----EVEK 183 (564)
Q Consensus 117 ~~y~~~~~~~~Gt~wYH~h~~~~---~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~---~~-~-----~~~~ 183 (564)
++..++++..+|.||.+++.... . .|+..+++.........+.........+--.+.... .. . ....
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~ 349 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADI 349 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSSE
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcccccchhhcccCCcccCCCcccCCcceE
Confidence 99999985557999999986421 1 344344444332211111100000000000000000 00 0 0000
Q ss_pred hh-hccCCCCCCCceEEEcCcCCCCCCC-------------C--CCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCce
Q 008484 184 QG-QKMGLPPNMSDAHTINGKPGPLFPC-------------S--EKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHN 247 (564)
Q Consensus 184 ~~-~~~g~~~~~~~~~~iNG~~~~~~~~-------------~--~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~ 247 (564)
.. ...+.. .....++|||+.+....- . ......++++.|++++|+++| ...|+||||||.
T Consensus 350 ~~~l~~~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh~ 425 (521)
T 1v10_A 350 NLNLRIGRN-ATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGHN 425 (521)
T ss_dssp EEECCEECC-SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSCC
T ss_pred EEEEEEecC-CceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccce
Confidence 00 000000 011267899998632100 0 012356899999999999999 457889999999
Q ss_pred eEEEeeCCCc----ccceEecEEEE-CCCceEEEEEEeCCCCceeEEEEeec
Q 008484 248 FTVVEVDAVY----TKPFTTEAILI-APGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 248 ~~via~DG~~----~~p~~~d~v~l-~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
|+|++.+|.. ..|..+||+.| .+|+++.+.|++++ ||.|++|||..
T Consensus 426 F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDN-PG~W~~HCHi~ 476 (521)
T 1v10_A 426 FDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN-PGPWFLHCHID 476 (521)
T ss_dssp EEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS-CEEEEEEESCH
T ss_pred EEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCC-CeeEEEeeChH
Confidence 9999999875 26889999999 89999999999998 79999999953
No 58
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.70 E-value=5.6e-16 Score=163.84 Aligned_cols=243 Identities=14% Similarity=0.164 Sum_probs=158.4
Q ss_pred EEEEEEEEEEEeecCCc-------------eeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCC-ceeeeCCCCCCCCC
Q 008484 33 KKYQFDVQVKNVSRLCH-------------AKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNG 98 (564)
Q Consensus 33 ~~~~l~~~~~~~~~~g~-------------~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG~~~~~~~ 98 (564)
.+| |.++......+|. ....+++||+. .|+|.|++|+ |+||.|..... ..+|++|....-.
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vI- 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILV- 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEE-
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEE-
Confidence 344 6666655544442 34789999997 5999999999 99999998654 5688888764432
Q ss_pred CCCCCC-----CccccccCCCCeEEEEEEeCCCCcceeEecchhhhh---------cceeeeEEEeCCC-CCCC------
Q 008484 99 WADGPA-----YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR---------ATVYGAIVIMPKP-GSPF------ 157 (564)
Q Consensus 99 ~~DGv~-----~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~---------~Gl~G~iiV~~~~-~~~~------ 157 (564)
..||.. .+....|.||||++..+++ .+.|+|...++..... .....-+.+.... ..+.
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~ 334 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKIFK 334 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCCccCCccccCCC
Confidence 278622 1345779999999999998 5678877766532210 0011112222211 0000
Q ss_pred CCCCCCCcEEEEeecccccCHHHHHHhhhccCCCC---CCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecC
Q 008484 158 PFPQPNREEVILLGEWWHTDVEEVEKQGQKMGLPP---NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAA 234 (564)
Q Consensus 158 ~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~---~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~ 234 (564)
+.+..+....+.++..... . ..+...+... .....++|||+.+. ...+.++++.|++++|+|.|.+
T Consensus 335 ~~~~~~~~r~~~l~~~~~~-~----~~~~~~~~~~~~~~~~~~~~iNG~~~~------~~~~~~~~~~G~~v~w~l~N~~ 403 (481)
T 3zx1_A 335 PSEEPKEFKEIIMSEDHMQ-M----HGMMGKSEGELKIALASMFLINRKSYD------LKRIDLSSKLGVVEDWIVINKS 403 (481)
T ss_dssp CCCCCCEEEEEEEEECCST-T----TTGGGCCHHHHHHHHHTTEEETTBCCC------TTCCCEEEETTCCEEEEEEECS
T ss_pred CCCCCCcEEEEEEeccchh-c----ccccccccccccccccceeEECCEeCC------CCCceEEeCCCCEEEEEEEcCC
Confidence 0111222333333221100 0 0000000000 00124899999762 1346799999999999999976
Q ss_pred CCCeEEEEEcCceeEEEee--CCCcc---cceEecEEEECCCceEEEEEEeCCCCceeEEEEeec
Q 008484 235 LNDELFFAIAGHNFTVVEV--DAVYT---KPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 235 ~~~~~~~~l~gh~~~via~--DG~~~---~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
...|+||||||.|+|++. ||... ++.++|++.|.||+++.|.+++++ ||.|++|||..
T Consensus 404 -~~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~-pG~w~~HCHil 466 (481)
T 3zx1_A 404 -HMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDF-KGLRMYHCHIL 466 (481)
T ss_dssp -SSCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCS-CEEEEEEESSH
T ss_pred -CCceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCC-CeeEEEEcCCh
Confidence 678889999999999999 99765 467899999999999999999988 79999999953
No 59
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.67 E-value=5.6e-15 Score=157.20 Aligned_cols=239 Identities=17% Similarity=0.180 Sum_probs=151.5
Q ss_pred eeeEEEECCcC---------CCCeEEeecCCEEEEEEEeCCCC-CceeeeCCCCCCCCCCCCCCCC----ccccccCCCC
Q 008484 50 AKPIVTVNGRF---------PGPTIYVREGDRVLVNVTNHAQY-NMSIHWHGLKQYRNGWADGPAY----ITQCPIKTGN 115 (564)
Q Consensus 50 ~~~~~~~Ng~~---------pgP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~~~~~~DGv~~----~~~~~i~PG~ 115 (564)
....+++||+- +-|+|+|++|+++|+||.|.... ...++++|....-.. .||.+. +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 35789999962 34799999999999999998764 356777776543322 788542 3456799999
Q ss_pred eEEEEEEeCCCCcceeEecchhhhh----cceeeeEEEeCCCCCCCCCCCCCC-cEEEEeeccccc--CHH---------
Q 008484 116 SYTYDFNVTGQRGTLWWHAHIFWLR----ATVYGAIVIMPKPGSPFPFPQPNR-EEVILLGEWWHT--DVE--------- 179 (564)
Q Consensus 116 ~~~y~~~~~~~~Gt~wYH~h~~~~~----~Gl~G~iiV~~~~~~~~~~~~~~~-e~~l~~~d~~~~--~~~--------- 179 (564)
|++..+++++.+|.||..+...... .|...+++.........+...... .. ..+.+.... ...
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHT-KCLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS-SBCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc-cccccccccccccccCCCccCCC
Confidence 9999999855569999998753211 233334444432211111100000 00 000000000 000
Q ss_pred HHHHhh-hccCCCCCCCceEEEcCcCCCCCCC-----------C----CCCeeeEEEecCcEEEEEEEecCCCCeEEEEE
Q 008484 180 EVEKQG-QKMGLPPNMSDAHTINGKPGPLFPC-----------S----EKHTFAMEVESGKTYLLRIINAALNDELFFAI 243 (564)
Q Consensus 180 ~~~~~~-~~~g~~~~~~~~~~iNG~~~~~~~~-----------~----~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l 243 (564)
...... ...+ ..+..++|||+.+....- . ......+.++.|++|+|.|.|......|+|||
T Consensus 325 ~~d~~~~l~~~---~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HL 401 (495)
T 3t6v_A 325 GADCNLNLSLG---FACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHL 401 (495)
T ss_dssp CSSEEEECCEE---EETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEE
T ss_pred CCcEEEEEEEE---ecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceee
Confidence 000000 0000 012368899987621100 0 01234689999999999998434466788999
Q ss_pred cCceeEEEeeCCCcc----cceEecEEEECC-CceEEEEEEeCCCCceeEEEEeec
Q 008484 244 AGHNFTVVEVDAVYT----KPFTTEAILIAP-GQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 244 ~gh~~~via~DG~~~----~p~~~d~v~l~p-g~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
|||.|+|++.+|... .|...|++.|.+ |+.+.+.|++++ ||.|++|||..
T Consensus 402 HGh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adn-PG~W~~HCHi~ 456 (495)
T 3t6v_A 402 HGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDN-PGPWFLHCHID 456 (495)
T ss_dssp TTCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCS-CEEEEEEESCH
T ss_pred cCCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCC-CeeEEEEecch
Confidence 999999999988653 688999999997 999999999999 79999999953
No 60
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.67 E-value=7e-15 Score=158.27 Aligned_cols=224 Identities=13% Similarity=0.138 Sum_probs=148.4
Q ss_pred eeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCC-ceeeeCCCCCCCCCCCCCCCC----ccccccCCCCeEEEEEEeCC
Q 008484 51 KPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNSYTYDFNVTG 125 (564)
Q Consensus 51 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG~~~~~~~~~DGv~~----~~~~~i~PG~~~~y~~~~~~ 125 (564)
...+++||+. .|+|+|++|+++|+||.|..... ..++++|....-.. .||.+. +....|.||||++..++++.
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4689999996 69999999999999999998654 45777776543322 788542 34567899999999999843
Q ss_pred C-CcceeEecchhhhh-------cceee-eEEEeCCCC-CCCC-----CCC------------------CCCcEEEEeec
Q 008484 126 Q-RGTLWWHAHIFWLR-------ATVYG-AIVIMPKPG-SPFP-----FPQ------------------PNREEVILLGE 172 (564)
Q Consensus 126 ~-~Gt~wYH~h~~~~~-------~Gl~G-~iiV~~~~~-~~~~-----~~~------------------~~~e~~l~~~d 172 (564)
+ .|.||......... ....+ +++...... .+.+ +.. .++.+.+.+.
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~- 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVV- 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEE-
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEE-
Confidence 3 57899988754321 01112 233222111 0000 000 0000000000
Q ss_pred ccccCHHHHHHhhhccCCCCCCCceEEEcCcCCCCCCC--------------C----CCCeeeEEEecCcEEEEEEEecC
Q 008484 173 WWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPC--------------S----EKHTFAMEVESGKTYLLRIINAA 234 (564)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~--------------~----~~~~~~l~~~~G~~~rlriiN~~ 234 (564)
... .......++|||+.+....- . ......+.++.|++++|.|.|.+
T Consensus 324 -------------~~~--~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~ 388 (534)
T 1zpu_A 324 -------------MDN--LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD 388 (534)
T ss_dssp -------------EEE--CTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECS
T ss_pred -------------eec--cCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCC
Confidence 000 00112467899987632100 0 00134689999999999999987
Q ss_pred CCCeEEEEEcCceeEEEeeCCC-----------c---------ccceEecEEEECCCceEEEEEEeCCCCceeEEEEeec
Q 008484 235 LNDELFFAIAGHNFTVVEVDAV-----------Y---------TKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 235 ~~~~~~~~l~gh~~~via~DG~-----------~---------~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
...|+||||||.|+|++.++. + ..|..+||+.|.+|+.+.|.|++++ ||.|++|||..
T Consensus 389 -~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN-PG~W~~HCHi~ 466 (534)
T 1zpu_A 389 -TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN-PGVWFFHCHIE 466 (534)
T ss_dssp -SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS-CEEEEEEECCH
T ss_pred -CCCCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC-CeeEEEEeCch
Confidence 567889999999999998853 1 2478999999999999999999998 79999999953
No 61
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.65 E-value=4.9e-15 Score=156.56 Aligned_cols=251 Identities=14% Similarity=0.111 Sum_probs=156.4
Q ss_pred EEEEEEEEEEEeecCC--------------ceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCC-ceeee-CCCCCCC
Q 008484 33 KKYQFDVQVKNVSRLC--------------HAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHW-HGLKQYR 96 (564)
Q Consensus 33 ~~~~l~~~~~~~~~~g--------------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~-~~iH~-HG~~~~~ 96 (564)
.++.|.++.-....+| .....+++||+. .|.+.+ +|+++|+||.|..... ..+++ +|....-
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 4666777765444333 234689999996 588876 6789999999998643 45776 5654322
Q ss_pred CCCCCCCC-----CccccccCCCCeEEEEEEeCCCCcceeEecchhhhh-------cceeeeEEEeC-----CCCCCC--
Q 008484 97 NGWADGPA-----YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR-------ATVYGAIVIMP-----KPGSPF-- 157 (564)
Q Consensus 97 ~~~~DGv~-----~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~-------~Gl~G~iiV~~-----~~~~~~-- 157 (564)
. ..||.. .+....|.||||++..+++ .+.+.|+.-+...... ..-.-.+-|.+ ....+.
T Consensus 229 I-a~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 I-ASDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp E-EETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred E-EeCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 1 178843 1445779999999999998 5677777665432111 00001222221 111110
Q ss_pred -CCC---C----CCCcEEEEeec-ccccCHHHHHHhh---hccCC-----------CCC----------CCceEEEcCcC
Q 008484 158 -PFP---Q----PNREEVILLGE-WWHTDVEEVEKQG---QKMGL-----------PPN----------MSDAHTINGKP 204 (564)
Q Consensus 158 -~~~---~----~~~e~~l~~~d-~~~~~~~~~~~~~---~~~g~-----------~~~----------~~~~~~iNG~~ 204 (564)
+++ . ..+++.+.+.. +...........+ ...+. ... ....++|||+.
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~ 386 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQA 386 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBC
T ss_pred ccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCee
Confidence 011 0 11333443321 0000000011100 00100 000 01247999998
Q ss_pred CCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCccc---ceEecEEEECCCceEEEEEEeC
Q 008484 205 GPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK---PFTTEAILIAPGQTTNVLVQAN 281 (564)
Q Consensus 205 ~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~---p~~~d~v~l~pg~r~dv~v~~~ 281 (564)
+. ...+.++++.|++++|+|+|.+....|+||||||+|+|++.||.... +.++|++.|. |++++|+|+++
T Consensus 387 ~~------~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~ 459 (488)
T 3od3_A 387 FD------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFN 459 (488)
T ss_dssp CC------TTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBC
T ss_pred CC------CCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEec
Confidence 63 13467899999999999999987678999999999999999998764 3579999999 99999999997
Q ss_pred CC---CceeEEEEeec
Q 008484 282 QK---PGRYFMAARPF 294 (564)
Q Consensus 282 ~~---pg~y~l~~~~~ 294 (564)
+. ||.|++|||..
T Consensus 460 ~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 460 HDAPKEHAYMAHCHLL 475 (488)
T ss_dssp SCCCGGGCEEEEESSH
T ss_pred cCCCCCCCEEEeCCch
Confidence 63 47999999953
No 62
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.64 E-value=9.1e-15 Score=158.49 Aligned_cols=224 Identities=16% Similarity=0.171 Sum_probs=138.5
Q ss_pred eEEeecCCEEEEEEEeCCCCC-ceeeeCCCCCCCCCCCCCCCC----ccccccCCCCeEEEEEEe-CCCCcceeEecchh
Q 008484 64 TIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNSYTYDFNV-TGQRGTLWWHAHIF 137 (564)
Q Consensus 64 ~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG~~~~~~~~~DGv~~----~~~~~i~PG~~~~y~~~~-~~~~Gt~wYH~h~~ 137 (564)
+|+|++|+++|+||.|..... ..+|++|....-.. .||.+. +....|.||||++..+++ +..+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 899999999999999998654 45888776554322 788532 345679999999999998 44589999998865
Q ss_pred hhh-c--ceeeeEEEeCCCCCCCCCCCCCCcEEEEeecccccCH-HHH-HHhhhc--cCCCC----------------CC
Q 008484 138 WLR-A--TVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHTDV-EEV-EKQGQK--MGLPP----------------NM 194 (564)
Q Consensus 138 ~~~-~--Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~-~~~-~~~~~~--~g~~~----------------~~ 194 (564)
... . ...+.|-.........+... ... +..|..... ... +..... ....+ ..
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~----~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 358 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQ----TPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVING 358 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC-CCC----CCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEETT
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC-CCC----CCccccccccccccccccccCCCCCCCCCCcEEEEEEEeeccCCC
Confidence 321 1 12233333322210000000 000 000000000 000 000000 00000 00
Q ss_pred CceEEEcCcCCCCC----------------C----------CCC-----------CCeeeEEEecCcEEEEEEEecCC--
Q 008484 195 SDAHTINGKPGPLF----------------P----------CSE-----------KHTFAMEVESGKTYLLRIINAAL-- 235 (564)
Q Consensus 195 ~~~~~iNG~~~~~~----------------~----------~~~-----------~~~~~l~~~~G~~~rlriiN~~~-- 235 (564)
...++|||+.+..- + |.. .....+.++.|++++|.|.|.+.
T Consensus 359 ~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~ 438 (552)
T 1aoz_A 359 YVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMK 438 (552)
T ss_dssp EEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSS
T ss_pred eEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccc
Confidence 12477888754110 0 000 01235889999999999999875
Q ss_pred ---CCeEEEEEcCceeEEEee-CCCc----------ccceEecEEEECCCceEEEEEEeCCCCceeEEEEeec
Q 008484 236 ---NDELFFAIAGHNFTVVEV-DAVY----------TKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 236 ---~~~~~~~l~gh~~~via~-DG~~----------~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
...|.||||||.|+|++. +|.+ ..|..+||+.|.+|+.+.|.|++++ ||.|++|||-.
T Consensus 439 ~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDN-PG~W~~HCHi~ 510 (552)
T 1aoz_A 439 ENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN-PGVWAFHCHIE 510 (552)
T ss_dssp TTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS-CEEEEEEESSH
T ss_pred cccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCC-CeEEEEEeeeh
Confidence 346899999999999998 4653 2578999999999999999999999 79999999953
No 63
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.64 E-value=5.3e-15 Score=157.36 Aligned_cols=238 Identities=16% Similarity=0.156 Sum_probs=149.8
Q ss_pred eeeEEEECCcC--------CCCeEEeecCCEEEEEEEeCCCCC-ceeeeCCCCCCCCCCCCCCCC----ccccccCCCCe
Q 008484 50 AKPIVTVNGRF--------PGPTIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNS 116 (564)
Q Consensus 50 ~~~~~~~Ng~~--------pgP~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG~~~~~~~~~DGv~~----~~~~~i~PG~~ 116 (564)
....+++||+- +-|.|+|++|+++|+||.|..... ..+|++|....-.. .||.+. +....|.||||
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 35789999973 347999999999999999998644 56888886654322 788542 33567999999
Q ss_pred EEEEEEeCCCCcceeEecchhhhh----cceeeeEEEeCCCCCCCCCCCCCCcEEEEeeccccc--C---H-H-----HH
Q 008484 117 YTYDFNVTGQRGTLWWHAHIFWLR----ATVYGAIVIMPKPGSPFPFPQPNREEVILLGEWWHT--D---V-E-----EV 181 (564)
Q Consensus 117 ~~y~~~~~~~~Gt~wYH~h~~~~~----~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~--~---~-~-----~~ 181 (564)
++..+++++.+|.||..+...... .+..-+++.........+........ ..+.+.... . . . ..
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCC
Confidence 999999855569999987643211 22222344332221111110000000 000000000 0 0 0 00
Q ss_pred HHhh-hccCCCCCCCceEEEcCcCCCCCCC-----------C----CCCeeeEEEecCcEEEEEEEec--CCCCeEEEEE
Q 008484 182 EKQG-QKMGLPPNMSDAHTINGKPGPLFPC-----------S----EKHTFAMEVESGKTYLLRIINA--ALNDELFFAI 243 (564)
Q Consensus 182 ~~~~-~~~g~~~~~~~~~~iNG~~~~~~~~-----------~----~~~~~~l~~~~G~~~rlriiN~--~~~~~~~~~l 243 (564)
.... ...+ ..+..++|||+.+....- . ......+.++.|++|+|.|.|. .....|+|||
T Consensus 323 d~~~~l~~~---~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HL 399 (499)
T 3pxl_A 323 DKAINMAFN---FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHL 399 (499)
T ss_dssp SEEEECCEE---ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEE
T ss_pred cEEEEEEEE---ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCcccee
Confidence 0000 0000 012368899987621000 0 0123468999999999999942 2345788999
Q ss_pred cCceeEEEeeCCCcc----cceEecEEEECC---CceEEEEEEeCCCCceeEEEEee
Q 008484 244 AGHNFTVVEVDAVYT----KPFTTEAILIAP---GQTTNVLVQANQKPGRYFMAARP 293 (564)
Q Consensus 244 ~gh~~~via~DG~~~----~p~~~d~v~l~p---g~r~dv~v~~~~~pg~y~l~~~~ 293 (564)
|||.|+|++.+|... .|...|++.|.+ |+.+.+.|++++ ||.|.+|||.
T Consensus 400 HGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adn-PG~W~~HCHi 455 (499)
T 3pxl_A 400 HGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN-PGPWFLHCHI 455 (499)
T ss_dssp TTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS-CEEEEEEESS
T ss_pred cCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCC-CceEEEEeCC
Confidence 999999999888643 688999999986 999999999999 7999999994
No 64
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.62 E-value=4.4e-14 Score=153.02 Aligned_cols=241 Identities=12% Similarity=0.123 Sum_probs=146.7
Q ss_pred eeEEEECCcCC--------CCeEEeecCCEEEEEEEeCCCCC-ceeeeCCCCCCCCCCCCCCCC----ccccccCCCCeE
Q 008484 51 KPIVTVNGRFP--------GPTIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNSY 117 (564)
Q Consensus 51 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG~~~~~~~~~DGv~~----~~~~~i~PG~~~ 117 (564)
...+++||+.. -|+|+|++|+++|+||.|..... ..+|++|....-.. .||.+. +....|.||||+
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEE
Confidence 46789999873 26999999999999999998664 46888886554322 788652 345679999999
Q ss_pred EEEEEeCCCCcceeEecch--hhh---h-cce-eeeEEEeCCCCCCCCCCC----CC----CcE-EEEeecccccCHH--
Q 008484 118 TYDFNVTGQRGTLWWHAHI--FWL---R-ATV-YGAIVIMPKPGSPFPFPQ----PN----REE-VILLGEWWHTDVE-- 179 (564)
Q Consensus 118 ~y~~~~~~~~Gt~wYH~h~--~~~---~-~Gl-~G~iiV~~~~~~~~~~~~----~~----~e~-~l~~~d~~~~~~~-- 179 (564)
+..++++..+|.||..... ... . ... .+.+....... ..|... .+ .+. ...+.........
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 352 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCcccc
Confidence 9999985557999998875 211 1 111 22232322211 101000 00 000 0000000000000
Q ss_pred -HHHHhhh-ccCCCCCCCceEEEcCcCCCCCCCCC-------------CCeeeEEEecCcEEEEEEEecCC----CCeEE
Q 008484 180 -EVEKQGQ-KMGLPPNMSDAHTINGKPGPLFPCSE-------------KHTFAMEVESGKTYLLRIINAAL----NDELF 240 (564)
Q Consensus 180 -~~~~~~~-~~g~~~~~~~~~~iNG~~~~~~~~~~-------------~~~~~l~~~~G~~~rlriiN~~~----~~~~~ 240 (564)
....... ...........++|||+.+....-.. .....+.++.++.+++.++|... ...|+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP 432 (559)
T 2q9o_A 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHP 432 (559)
T ss_dssp CCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEE
T ss_pred cceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCc
Confidence 0000000 00000112246899999763210000 01234777777666665666543 57899
Q ss_pred EEEcCceeEEEeeCC---------Cc------------ccceEecEEEECCCceEEEEEEeCCCCceeEEEEeec
Q 008484 241 FAIAGHNFTVVEVDA---------VY------------TKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 241 ~~l~gh~~~via~DG---------~~------------~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
||||||.|+|++.++ .. ..|..+||+.|.+|+++.+.|++++ ||.|++|||..
T Consensus 433 ~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN-PG~W~~HCHil 506 (559)
T 2q9o_A 433 MHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN-PGAWLFHCHIA 506 (559)
T ss_dssp EEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS-CEEEEEEECCH
T ss_pred EEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC-CeeEEEEecch
Confidence 999999999999986 21 1467899999999999999999998 79999999953
No 65
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.62 E-value=7.4e-15 Score=159.23 Aligned_cols=231 Identities=15% Similarity=0.115 Sum_probs=145.4
Q ss_pred eeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCC-ceeeeCCC---------CCCCCCCCCCCCC-----cc------c
Q 008484 50 AKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHGL---------KQYRNGWADGPAY-----IT------Q 108 (564)
Q Consensus 50 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG~---------~~~~~~~~DGv~~-----~~------~ 108 (564)
....+++||+. .|.+.|++| ++|+||.|..... ..+++.|. .+.. .||.+. +. .
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa---~DG~~l~~P~~~~~~~~~~~ 327 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE---eCCeEccCCEEecccCcccE
Confidence 45688999996 699999999 9999999998654 45777554 3332 788432 22 5
Q ss_pred cccCCCCeEEEEEEeCCCCcc-eeEecchhhhhc-----------ceeeeEEEeCCC-CCCCCCCCCC------------
Q 008484 109 CPIKTGNSYTYDFNVTGQRGT-LWWHAHIFWLRA-----------TVYGAIVIMPKP-GSPFPFPQPN------------ 163 (564)
Q Consensus 109 ~~i~PG~~~~y~~~~~~~~Gt-~wYH~h~~~~~~-----------Gl~G~iiV~~~~-~~~~~~~~~~------------ 163 (564)
..|.||||++..+++...+|+ ++.......... +..=-|.|.... ......+...
T Consensus 328 l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~ 407 (612)
T 2g23_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccc
Confidence 679999999999998555675 555544321111 111124554332 1111111100
Q ss_pred -CcEEEEee-c-----------ccccC--HHHHHHhhhccC-----CCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecC
Q 008484 164 -REEVILLG-E-----------WWHTD--VEEVEKQGQKMG-----LPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESG 223 (564)
Q Consensus 164 -~e~~l~~~-d-----------~~~~~--~~~~~~~~~~~g-----~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G 223 (564)
....+.+. . |.... ..... .....+ ........++|||+.+ .+.+.++++.|
T Consensus 408 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~iNG~~~-------~~~~~~~v~~G 479 (612)
T 2g23_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADV-QVPAEGVIQVTGADGRTKTYRRTAATF-------NDGLGFTIGEG 479 (612)
T ss_dssp CEEEEEEECCTTCTTSTTCCCEEEEEEEC------CCSCTTEEEEECTTSCEEEEEEEECST-------TSCCCEEEETT
T ss_pred cceeEEeeccccccccccccceeecccccccccc-ccccccceeeeccCCceeEEEECCccC-------CCCCceEecCC
Confidence 01122221 0 10000 00000 000000 0001124688999976 24578999999
Q ss_pred cEEEEEEEecCCCCeEEEEEcCceeEEEeeCCC------------------------cc---cceEecEEEECCCceEEE
Q 008484 224 KTYLLRIINAALNDELFFAIAGHNFTVVEVDAV------------------------YT---KPFTTEAILIAPGQTTNV 276 (564)
Q Consensus 224 ~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~------------------------~~---~p~~~d~v~l~pg~r~dv 276 (564)
++++|+|+|.+ ...|+||||||.|+|++.+|. .. ++.++|++.|.||+++.|
T Consensus 480 ~~v~w~l~N~~-~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i 558 (612)
T 2g23_A 480 THEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRV 558 (612)
T ss_dssp CEEEEEEEECS-SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEE
T ss_pred CEEEEEEEeCC-CCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEE
Confidence 99999999998 667889999999999987531 11 234799999999999999
Q ss_pred EEEeCCCCceeEEEEeec
Q 008484 277 LVQANQKPGRYFMAARPF 294 (564)
Q Consensus 277 ~v~~~~~pg~y~l~~~~~ 294 (564)
.++++..||.|++|||..
T Consensus 559 ~~~~~~~pG~w~~HCHil 576 (612)
T 2g23_A 559 MGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EEECCSCCEEEEEEESSH
T ss_pred EEEeCCCCccEEEEeCch
Confidence 999994489999999954
No 66
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.62 E-value=8.6e-15 Score=154.28 Aligned_cols=212 Identities=16% Similarity=0.144 Sum_probs=142.1
Q ss_pred ceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCC-ceeee--CC---CCCCCCCCCCCCCC-----ccccccCCCCeE
Q 008484 49 HAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHW--HG---LKQYRNGWADGPAY-----ITQCPIKTGNSY 117 (564)
Q Consensus 49 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~-~~iH~--HG---~~~~~~~~~DGv~~-----~~~~~i~PG~~~ 117 (564)
.....+++||+. .|+|+|++| ++|+||.|..... ..+|+ +| ....-. ..||.+. +....|.||||+
T Consensus 167 ~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~vi-a~DG~~~~~P~~~~~l~l~pgeR~ 243 (448)
T 3aw5_A 167 FLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLI-AVDQGFLARPIEVRALFLAPAERA 243 (448)
T ss_dssp CCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEE-EETTEEEEEEEEESCEEECTTCEE
T ss_pred ccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEE-EeCCCccCCceEeceEEECCcceE
Confidence 345789999997 699999999 9999999998654 56898 66 333221 2788542 335678999999
Q ss_pred EEEEEeCCCCcceeEecchhhhhcc----e----------eee--EEEeCCCCC--CCCCCC-------CCCcEEEEeec
Q 008484 118 TYDFNVTGQRGTLWWHAHIFWLRAT----V----------YGA--IVIMPKPGS--PFPFPQ-------PNREEVILLGE 172 (564)
Q Consensus 118 ~y~~~~~~~~Gt~wYH~h~~~~~~G----l----------~G~--iiV~~~~~~--~~~~~~-------~~~e~~l~~~d 172 (564)
+..+++ . .|.||..++......| + ... |.+...... +..+.. ...+..+.+.
T Consensus 244 dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~- 320 (448)
T 3aw5_A 244 EVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALS- 320 (448)
T ss_dssp EEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEE-
T ss_pred EEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEe-
Confidence 999998 4 4788888764321100 1 111 222111110 000000 0001111111
Q ss_pred ccccCHHHHHHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEE-EecCcEEEEEEEecCCCCeEEEEEcCceeEEE
Q 008484 173 WWHTDVEEVEKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAME-VESGKTYLLRIINAALNDELFFAIAGHNFTVV 251 (564)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~-~~~G~~~rlriiN~~~~~~~~~~l~gh~~~vi 251 (564)
.+ ...++|||+.+.. ..+.+. ++.|++++|+|.|.+....|+||||||.|+|+
T Consensus 321 ---------------~~-----~~~~~iNg~~~~~------~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl 374 (448)
T 3aw5_A 321 ---------------LS-----GMQWTINGMFWNA------SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWII 374 (448)
T ss_dssp ---------------EE-----TTEEEETTBCCCT------TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEE
T ss_pred ---------------CC-----CceeeECCCcCCC------CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEE
Confidence 00 1258999998631 234567 89999999999999856678899999999999
Q ss_pred eeCCCcc------------cc---eEecEEEECCCceEEEEEEeC---C-CCceeEEEEeec
Q 008484 252 EVDAVYT------------KP---FTTEAILIAPGQTTNVLVQAN---Q-KPGRYFMAARPF 294 (564)
Q Consensus 252 a~DG~~~------------~p---~~~d~v~l~pg~r~dv~v~~~---~-~pg~y~l~~~~~ 294 (564)
+.+|... .| .++||+.|.||+++.+.+++. . .| |++|||..
T Consensus 375 ~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil 434 (448)
T 3aw5_A 375 ERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNL 434 (448)
T ss_dssp EEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSH
T ss_pred EecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCCh
Confidence 9999764 23 589999999999999996664 2 24 99999953
No 67
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.58 E-value=5.5e-15 Score=158.68 Aligned_cols=218 Identities=13% Similarity=0.085 Sum_probs=139.5
Q ss_pred eeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCC-ceeeeCCC-CCCCCCCCCCCCC-----ccccccCCCCeEEEEEE
Q 008484 50 AKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHGL-KQYRNGWADGPAY-----ITQCPIKTGNSYTYDFN 122 (564)
Q Consensus 50 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG~-~~~~~~~~DGv~~-----~~~~~i~PG~~~~y~~~ 122 (564)
....+++||+. .|.|.|+.| ++|+||.|..... ..+|+.|. ...-. ..||... +....|.||||++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~vi-a~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQI-GSDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEE-EETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEE-ccCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 34789999997 699999885 9999999998764 56888776 33221 2788432 34577899999999999
Q ss_pred eCCCCcceeEe-cchh--hhh-cce-eeeEEEeCCC--CC--CCCCCCCC------------CcEEEEeecccccCHHHH
Q 008484 123 VTGQRGTLWWH-AHIF--WLR-ATV-YGAIVIMPKP--GS--PFPFPQPN------------REEVILLGEWWHTDVEEV 181 (564)
Q Consensus 123 ~~~~~Gt~wYH-~h~~--~~~-~Gl-~G~iiV~~~~--~~--~~~~~~~~------------~e~~l~~~d~~~~~~~~~ 181 (564)
++..+|.++.- .... ... ... ...+...... .. ....+... .+..+.+..
T Consensus 306 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~--------- 376 (513)
T 2wsd_A 306 FTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAG--------- 376 (513)
T ss_dssp CGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEE---------
T ss_pred CCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEe---------
Confidence 84446874332 1110 000 011 1222222111 00 00010000 001111110
Q ss_pred HHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCC-----
Q 008484 182 EKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAV----- 256 (564)
Q Consensus 182 ~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~----- 256 (564)
.........++|||+.+. ....+.++.|++++|+|.|.+ ...|.||||||.|+|++.+|.
T Consensus 377 -------~~~~~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~-~~~HP~HlHG~~F~Vl~~~~~~~~~~ 441 (513)
T 2wsd_A 377 -------TQDEYGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPT-RGTHPIHLHLVSFRVLDRRPFDIARY 441 (513)
T ss_dssp -------EECTTSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECS-SSCEEEEESSCCEEEEEEEEBCHHHH
T ss_pred -------ecCCCCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCC-CCCcCEeEeCceEEEEEecCcccccc
Confidence 000011135789999762 234578999999999999988 567889999999999998751
Q ss_pred ----------c------ccceEecEEEECCCceEEEEEEeCCCCceeEEEEeec
Q 008484 257 ----------Y------TKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 257 ----------~------~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
. -++.++|++.|.||+++.|.+++++.||.|++|||..
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 442 QESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp HHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred cccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 0 0235899999999999999999954489999999954
No 68
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.56 E-value=5.8e-14 Score=150.89 Aligned_cols=225 Identities=16% Similarity=0.126 Sum_probs=140.4
Q ss_pred eeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCC-ceeeeCC---------CCCCCCCCCCCCC-----CccccccCCC
Q 008484 50 AKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHG---------LKQYRNGWADGPA-----YITQCPIKTG 114 (564)
Q Consensus 50 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG---------~~~~~~~~~DGv~-----~~~~~~i~PG 114 (564)
....+++||+. .|.|.|++| ++|+||.|..... ..++++| +.+.. .||.. .+....|.||
T Consensus 200 ~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa---~DG~~~~~P~~~~~l~l~pg 274 (534)
T 3abg_A 200 WGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA---SDSGLLEHPADTSLLYISMA 274 (534)
T ss_dssp CCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE---ETTEEEEEEEEESCEEECTT
T ss_pred cCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEEE---eCCCcccCceEeceEEECCc
Confidence 35689999996 799999985 9999999998765 4688865 33333 78742 1445779999
Q ss_pred CeEEEEEEeCCCCc-ceeEecchhhhh--------cceeeeEEEeCCCCC----CCCCCCCCCcEEEEeecccccCHHHH
Q 008484 115 NSYTYDFNVTGQRG-TLWWHAHIFWLR--------ATVYGAIVIMPKPGS----PFPFPQPNREEVILLGEWWHTDVEEV 181 (564)
Q Consensus 115 ~~~~y~~~~~~~~G-t~wYH~h~~~~~--------~Gl~G~iiV~~~~~~----~~~~~~~~~e~~l~~~d~~~~~~~~~ 181 (564)
||++..++++..+| +||......... ....+.+-....... ....+....... ...- ....
T Consensus 275 eR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~--~p~~-~~~~--- 348 (534)
T 3abg_A 275 ERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVP--FPSP-TTNT--- 348 (534)
T ss_dssp CEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCS--CCCC-CCCC---
T ss_pred cEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCC--CCCC-cccc---
Confidence 99999999854477 577665321000 011122222211110 000000000000 0000 0000
Q ss_pred HHhhhccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEee-CCC---c
Q 008484 182 EKQGQKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEV-DAV---Y 257 (564)
Q Consensus 182 ~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~-DG~---~ 257 (564)
...+. .+ .....++|||+.+... .....+.++.|++++|.|.|.+....|+||||||.|+|++. +|. .
T Consensus 349 ~~~~~-~~---~~~~~w~iNG~~f~~~----~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~ 420 (534)
T 3abg_A 349 PRQFR-FG---RTGPTWTINGVAFADV----QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNART 420 (534)
T ss_dssp CEEEE-CS---CCCSTTCCCCBTTBCT----TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSC
T ss_pred ceEEE-Ee---ccCceeEECCcccCCC----CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCc
Confidence 00000 00 0113578999976210 11234689999999999999986668889999999999998 663 1
Q ss_pred cc---ceEecEEEECCCceEEEEEE-eCCCCceeEEEEeec
Q 008484 258 TK---PFTTEAILIAPGQTTNVLVQ-ANQKPGRYFMAARPF 294 (564)
Q Consensus 258 ~~---p~~~d~v~l~pg~r~dv~v~-~~~~pg~y~l~~~~~ 294 (564)
.. ...+|++.|.||+++.|.++ +++ ||.|++|||..
T Consensus 421 ~~~~~~~~rDTV~v~pg~~v~I~~~~adn-pG~w~~HCHil 460 (534)
T 3abg_A 421 VMPYESGLKDVVWLGRRETVVVEAHYAPF-PGVYMFHCHNL 460 (534)
T ss_dssp CCSGGGSCBSEECCCSSEEEEEEEECCSC-CEEEEEEESCH
T ss_pred CCccccCCcCeEEcCCCCEEEEEEEECCC-CccEEEecChH
Confidence 11 25689999999999999998 666 89999999954
No 69
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.53 E-value=3.5e-15 Score=124.96 Aligned_cols=89 Identities=21% Similarity=0.205 Sum_probs=69.8
Q ss_pred cCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCC--CCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecch
Q 008484 59 RFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNG--WADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 136 (564)
Q Consensus 59 ~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~--~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~ 136 (564)
+|++|+|++++||+|+ ++|....++++||||....... .+||.+ .++..|.||++++|+|+++.++|+||||||.
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCAP 91 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECTT
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeCC
Confidence 6778999999999985 5799889999999998764310 122222 2457899999999999875689999999993
Q ss_pred hhhhcceeeeEEEeC
Q 008484 137 FWLRATVYGAIVIMP 151 (564)
Q Consensus 137 ~~~~~Gl~G~iiV~~ 151 (564)
| ...||.|.|+|++
T Consensus 92 H-~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 92 H-RGAGMVGKITVEG 105 (105)
T ss_dssp T-GGGTCEEEEEECC
T ss_pred c-hhcCCEEEEEEcC
Confidence 3 2479999999974
No 70
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.46 E-value=3.1e-12 Score=137.83 Aligned_cols=239 Identities=11% Similarity=0.029 Sum_probs=144.4
Q ss_pred eeEEEECCcCC----------------CCeEEeecCCEEEEEEEeCCCCC-ceeeeCCCCCCCCCCCCCCCC----cccc
Q 008484 51 KPIVTVNGRFP----------------GPTIYVREGDRVLVNVTNHAQYN-MSIHWHGLKQYRNGWADGPAY----ITQC 109 (564)
Q Consensus 51 ~~~~~~Ng~~p----------------gP~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG~~~~~~~~~DGv~~----~~~~ 109 (564)
...+++||+.. .++|.|++|+++|+||.|..... ..++.+|....-.. .||.+. +...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEE
Confidence 45689999742 37999999999999999998655 46777776654322 788542 3356
Q ss_pred ccCCCCeEEEEEEeCCCCcceeEecchhhh-----hcceeeeEEEeCCCCCCCCCCCC--CCcEEEEe--ecccccCHHH
Q 008484 110 PIKTGNSYTYDFNVTGQRGTLWWHAHIFWL-----RATVYGAIVIMPKPGSPFPFPQP--NREEVILL--GEWWHTDVEE 180 (564)
Q Consensus 110 ~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~-----~~Gl~G~iiV~~~~~~~~~~~~~--~~e~~l~~--~d~~~~~~~~ 180 (564)
.|.||||++..+++++.+|.||........ ..+..-+|+.........|.... ..+..+-. ..........
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~~~~~~~~~L~P~~~~~ 383 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGTCEDEPVASLVPHLALD 383 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCCSCCSCGGGCCBSSCCB
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccchhhcccccccccCCCCC
Confidence 789999999999996668999999876421 12222234433222111111000 00000000 0000000000
Q ss_pred HHHhh-----hccCCCCCCCceEEEcCcCCCCC-C---------CC---CCCeeeEEE----ecCcEEEEEEEecCC-CC
Q 008484 181 VEKQG-----QKMGLPPNMSDAHTINGKPGPLF-P---------CS---EKHTFAMEV----ESGKTYLLRIINAAL-ND 237 (564)
Q Consensus 181 ~~~~~-----~~~g~~~~~~~~~~iNG~~~~~~-~---------~~---~~~~~~l~~----~~G~~~rlriiN~~~-~~ 237 (564)
..... ...+ ......+.|||..+... . .. ......+.+ +.|++|.|.|-|.+. ..
T Consensus 384 ~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~~ 461 (580)
T 3sqr_A 384 VGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFGI 461 (580)
T ss_dssp CCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSCC
T ss_pred CCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcccc
Confidence 00000 0000 01123577899875210 0 00 001112344 459999999999872 35
Q ss_pred eEEEEEcCceeEEEeeCCC------------cccceEecEEEECCCceEEEEEEeCCCCceeEEEEee
Q 008484 238 ELFFAIAGHNFTVVEVDAV------------YTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARP 293 (564)
Q Consensus 238 ~~~~~l~gh~~~via~DG~------------~~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~ 293 (564)
.|+||||||.|+|++.+.+ +..|...|++.+.+|+.+.+.|++++ ||.|.+|||-
T Consensus 462 ~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adN-PG~W~~HCHi 528 (580)
T 3sqr_A 462 WHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN-PGSWLLHCHI 528 (580)
T ss_dssp CEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCS-CEEEEEEECS
T ss_pred ceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCC-CeeeEEEECc
Confidence 7889999999999998432 22578999999999999999999999 7999999994
No 71
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.42 E-value=6e-12 Score=138.67 Aligned_cols=232 Identities=13% Similarity=0.093 Sum_probs=135.4
Q ss_pred eeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCC-ceeeeCC---------CCCCCCCCCCCCC-----------Cccc
Q 008484 50 AKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYN-MSIHWHG---------LKQYRNGWADGPA-----------YITQ 108 (564)
Q Consensus 50 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~-~~iH~HG---------~~~~~~~~~DGv~-----------~~~~ 108 (564)
....+++||+. .|.+.++. .++|+||.|..... ..+.+-+ +.+.. .||.. .++.
T Consensus 253 ~gd~~~vNG~~-~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa---~DG~~l~~Pv~v~~p~~~~~ 327 (612)
T 3gyr_A 253 FGPYTTVNGRI-WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCceeeecCCc-cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEE---eCCCccccceeccCcccccE
Confidence 45678999996 69998865 58999999997543 2344433 23332 68832 1234
Q ss_pred cccCCCCeEEEEEEeCCCCcceeEecchhhhh--------cce--ee--eEEEeCCCC-CCCCCCC------------CC
Q 008484 109 CPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR--------ATV--YG--AIVIMPKPG-SPFPFPQ------------PN 163 (564)
Q Consensus 109 ~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~--------~Gl--~G--~iiV~~~~~-~~~~~~~------------~~ 163 (564)
..|.||||++..++++..+|.+|+-....... .+. .. .+.+.+... .....+. ..
T Consensus 328 l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 407 (612)
T 3gyr_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccc
Confidence 67999999999999855566665543321110 011 11 122222211 0000000 00
Q ss_pred C-cEEEEeecccccCH-------------HHHHHhhh-----ccCCCCCCCceEEEcCcCCCCCCCCCCCeeeEEEecCc
Q 008484 164 R-EEVILLGEWWHTDV-------------EEVEKQGQ-----KMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGK 224 (564)
Q Consensus 164 ~-e~~l~~~d~~~~~~-------------~~~~~~~~-----~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~l~~~~G~ 224 (564)
. .....+..-..... ........ ...........+.+||+.+ .....+.++.|+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~-------~~~~~~~~~~g~ 480 (612)
T 3gyr_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTF-------NDGLGFTIGEGT 480 (612)
T ss_dssp CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECST-------TSCCCEEEETTC
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccC-------CCCcceEeCCCC
Confidence 0 11111110000000 00000000 0000111234567788765 234678999999
Q ss_pred EEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcc---------------------------cceEecEEEECCCceEEEE
Q 008484 225 TYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT---------------------------KPFTTEAILIAPGQTTNVL 277 (564)
Q Consensus 225 ~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~---------------------------~p~~~d~v~l~pg~r~dv~ 277 (564)
+++|.|.|.+ ...|.||||||.|+|++.+|... ++-++||+.|.+|+.+.|.
T Consensus 481 ~~~w~i~N~~-~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~ 559 (612)
T 3gyr_A 481 HEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECS-SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEcCC-CCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEE
Confidence 9999999998 56788999999999998766321 2235899999999999999
Q ss_pred EEeCCCCceeEEEEeec
Q 008484 278 VQANQKPGRYFMAARPF 294 (564)
Q Consensus 278 v~~~~~pg~y~l~~~~~ 294 (564)
+++.+.||.|++|||-.
T Consensus 560 ~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 560 GKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EECCSCCEEEEEEESSH
T ss_pred EEeCCCCcceEEcCCCh
Confidence 99655589999999954
No 72
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.40 E-value=1e-12 Score=111.11 Aligned_cols=105 Identities=18% Similarity=0.177 Sum_probs=79.8
Q ss_pred EEEEEEEEEEEee-----cCCceeeE-EEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCc
Q 008484 33 KKYQFDVQVKNVS-----RLCHAKPI-VTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYI 106 (564)
Q Consensus 33 ~~~~l~~~~~~~~-----~~g~~~~~-~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 106 (564)
++|.+.+.+.... .+|..... ..+|++++.+.|++++||+|+++++|.... +||+.... .|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---
Confidence 3456666554433 34555555 488989988999999999999999999865 45544332 122
Q ss_pred cccccCCCCeEEEEEEeCCCCcceeEecchhhhhcceeeeEEEeC
Q 008484 107 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRATVYGAIVIMP 151 (564)
Q Consensus 107 ~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~~Gl~G~iiV~~ 151 (564)
+..+.||++++|.|++ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 3679999999999997 889999999999876656999999974
No 73
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.37 E-value=2.2e-12 Score=115.10 Aligned_cols=99 Identities=19% Similarity=0.208 Sum_probs=71.5
Q ss_pred CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCC------CCCcc-ccccCCCC--eE
Q 008484 47 LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADG------PAYIT-QCPIKTGN--SY 117 (564)
Q Consensus 47 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG------v~~~~-~~~i~PG~--~~ 117 (564)
.|.....+.++|. ++|+|+|++||+|+++++|... ...|.+.+...+.++.+. ..... ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3455556677777 5799999999999999999742 335666665544333221 00000 02689999 99
Q ss_pred EEEEEeCCCCcceeEecchhhhh-cceeeeEEEe
Q 008484 118 TYDFNVTGQRGTLWWHAHIFWLR-ATVYGAIVIM 150 (564)
Q Consensus 118 ~y~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~iiV~ 150 (564)
+|+|++ ++|+||||||..++. +||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999985 899999999987776 8999999985
No 74
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.23 E-value=2.3e-11 Score=129.92 Aligned_cols=96 Identities=24% Similarity=0.304 Sum_probs=74.8
Q ss_pred CCceeeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCC
Q 008484 47 LCHAKPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQ 126 (564)
Q Consensus 47 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~ 126 (564)
++....++++|+++|+|.|++++||+|+++|+|.+...-. +||+.+.. .|+ ...+.||++++|.|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 4577889999999999999999999999999998653211 35554432 222 2579999999999998 89
Q ss_pred CcceeEecchh--hhhcceeeeEEEeCCC
Q 008484 127 RGTLWWHAHIF--WLRATVYGAIVIMPKP 153 (564)
Q Consensus 127 ~Gt~wYH~h~~--~~~~Gl~G~iiV~~~~ 153 (564)
+|+||||||.. ....||+|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 99999999932 1125999999999763
No 75
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.16 E-value=1.4e-10 Score=96.70 Aligned_cols=79 Identities=22% Similarity=0.318 Sum_probs=62.7
Q ss_pred CCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecch
Q 008484 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 136 (564)
Q Consensus 57 Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~ 136 (564)
+..|..+.|++++||+|++ .|....++++|+++. .||.....+..+.||++++|.| .++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 4456568999999999765 699888999998852 3454434445689999999888 579999999998
Q ss_pred hhhhcceeeeEEEe
Q 008484 137 FWLRATVYGAIVIM 150 (564)
Q Consensus 137 ~~~~~Gl~G~iiV~ 150 (564)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 65 999999985
No 76
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.10 E-value=2.8e-10 Score=99.96 Aligned_cols=95 Identities=14% Similarity=0.180 Sum_probs=71.4
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCC-CCCeeecCCceEEEe--------ecC-CCCCCCCCCCCCCCCCCCcceeeEecCC
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVE-SHPFHLHGYNFFVVG--------TGI-GNFDPVKYPANYNLVDPIERNTAAVPTG 509 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~-~HP~HlHG~~F~Vv~--------~g~-g~~~~~~~~~~~~~~~p~~rDTv~vp~~ 509 (564)
..+.++.|++|+|++.|.+ .. .|.||+|+....+.. .+. ..|.+. -....++||..|.|+
T Consensus 35 ~~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~-------~~~~~~~~t~~l~pG 104 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA-------DKSNIIAESPLANGN 104 (139)
T ss_dssp SEEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS-------CCTTEEEECCCBCTT
T ss_pred CeEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCc-------ccccccccccccCCC
Confidence 3467899999999999965 45 899999986531110 000 011110 012357899999999
Q ss_pred CEEEEEEEecCceeeEEEeechhchhcccEEEEEEe
Q 008484 510 GWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 510 g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
....|.|++++||.|.||||+..|.+ ||+..+.|.
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 99999999999999999999999999 999999873
No 77
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.07 E-value=2.7e-10 Score=94.95 Aligned_cols=85 Identities=16% Similarity=0.233 Sum_probs=65.0
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEe-
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA- 518 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a- 518 (564)
..+.++.|++|+|+ |.. ...|++|+||..+... . +. . .+....++..++||....++|.+
T Consensus 19 ~~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~-~--g~--------~---~~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA-S--KE--------L---ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG-C--HH--------H---HHHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc-c--cc--------c---cccccccccccCCCCeEEEEEecC
Confidence 45788999999874 643 5789999999865321 0 00 0 00112578899999999999998
Q ss_pred cCceeeEEEeechhchhcccEEEEEEe
Q 008484 519 DNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 519 dnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
+.||.|.|||| .|...||++.+.|.
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 79999999999 79999999999985
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.01 E-value=8.7e-10 Score=91.96 Aligned_cols=83 Identities=14% Similarity=0.142 Sum_probs=61.2
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCC----CccccccCCCCeEEEEEEeCCCCcceeEecchhh
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPA----YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFW 138 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~----~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~ 138 (564)
+.|++++||+|++ .|....++++|+|+..... .+|.. ..+...+.||++++|.|+++.++|+|||||| .+
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-~H 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-PH 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-TT
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-Ch
Confidence 7999999999765 5887778999988765432 12210 0122458999999999975468999999999 33
Q ss_pred hhcceeeeEEEeC
Q 008484 139 LRATVYGAIVIMP 151 (564)
Q Consensus 139 ~~~Gl~G~iiV~~ 151 (564)
...||.|.|+|.+
T Consensus 94 ~~~GM~G~i~V~~ 106 (106)
T 2gim_A 94 RGAGMVGKITVAG 106 (106)
T ss_dssp GGGTCEEEEEECC
T ss_pred hhcCcEEEEEEcC
Confidence 3369999999973
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.93 E-value=4.8e-09 Score=92.05 Aligned_cols=91 Identities=11% Similarity=0.107 Sum_probs=65.8
Q ss_pred cCCCCeEEeecCCEEEEEEEeCCCC-CceeeeCCCCCC-----------C---CCC-CCCCCC--ccccccCCCCeEEEE
Q 008484 59 RFPGPTIYVREGDRVLVNVTNHAQY-NMSIHWHGLKQY-----------R---NGW-ADGPAY--ITQCPIKTGNSYTYD 120 (564)
Q Consensus 59 ~~pgP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~-----------~---~~~-~DGv~~--~~~~~i~PG~~~~y~ 120 (564)
+|--+.|+|++||+|+++|+|.... +++++.++.... . ..+ .++.+. .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4433799999999999999999877 888888874310 0 000 001000 012348999999999
Q ss_pred EEeCCCCcceeEecchhhhhcceeeeEEEe
Q 008484 121 FNVTGQRGTLWWHAHIFWLRATVYGAIVIM 150 (564)
Q Consensus 121 ~~~~~~~Gt~wYH~h~~~~~~Gl~G~iiV~ 150 (564)
|++ .++|+|+||||...+..||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 997 78999999999865545999999984
No 80
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.78 E-value=1.6e-08 Score=84.11 Aligned_cols=85 Identities=18% Similarity=0.237 Sum_probs=62.4
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEe-
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA- 518 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a- 518 (564)
..+.++.|++|+|+ |.+ ...|+||+|+..+.. . .|. . .....+|++.+.+|....+.|.+
T Consensus 20 ~~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~-~--~g~----------~-~~~~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA-K--SAD----------L-AKSLSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT-C--CHH----------H-HHHHCBCSCCCSTTCEEEEECCTT
T ss_pred CEEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc-c--ccc----------c-chhccccceeeCCCCEEEEEEecC
Confidence 34688999999886 543 568999999764310 0 000 0 00011467789999999998887
Q ss_pred cCceeeEEEeechhchhcccEEEEEEe
Q 008484 519 DNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 519 dnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
+.||.|.|||| .|.+.||.+.+.|.
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 79999999999 89999999999885
No 81
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.77 E-value=2.2e-08 Score=82.39 Aligned_cols=79 Identities=10% Similarity=0.120 Sum_probs=62.6
Q ss_pred CCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecch
Q 008484 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 136 (564)
Q Consensus 57 Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~ 136 (564)
|..|--..|++++||+|++.++|....++++...+.... ..+.||++.+|.|+. .++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~ 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRY 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcc
Confidence 455533589999999999999999877777665544321 357899999999987 889999999975
Q ss_pred hhhhcceeeeEEEe
Q 008484 137 FWLRATVYGAIVIM 150 (564)
Q Consensus 137 ~~~~~Gl~G~iiV~ 150 (564)
|. ..||.|.|+|+
T Consensus 88 H~-~~gM~G~i~Ve 100 (100)
T 4hci_A 88 HL-LKGMEGKVIVK 100 (100)
T ss_dssp TG-GGTCEEEEEEC
T ss_pred cc-CCCCEEEEEEC
Confidence 32 26999999996
No 82
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.70 E-value=7.5e-08 Score=84.45 Aligned_cols=92 Identities=14% Similarity=0.113 Sum_probs=65.2
Q ss_pred cCCCCeEEeecCCEEEEEEEe--CCCCCceeeeCCCC------------C----CCCCCCCCCCC-ccccccCCCCeEEE
Q 008484 59 RFPGPTIYVREGDRVLVNVTN--HAQYNMSIHWHGLK------------Q----YRNGWADGPAY-ITQCPIKTGNSYTY 119 (564)
Q Consensus 59 ~~pgP~i~v~~Gd~v~v~l~N--~l~~~~~iH~HG~~------------~----~~~~~~DGv~~-~~~~~i~PG~~~~y 119 (564)
+|--+.|+|++||+|+++++| .....++++.+... . ...+..|.... .....|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 343369999999999999999 66778888776321 0 00000011000 00135799999999
Q ss_pred EEEeCCCCcceeEecchhhhh-cceeeeEEEeC
Q 008484 120 DFNVTGQRGTLWWHAHIFWLR-ATVYGAIVIMP 151 (564)
Q Consensus 120 ~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~iiV~~ 151 (564)
.|++ +++|+|||||+..++. .||.|.|+|.|
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9998 7899999999986665 79999999974
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.68 E-value=2.9e-08 Score=81.28 Aligned_cols=80 Identities=15% Similarity=0.221 Sum_probs=57.9
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCC-CCCccccccCCCCeEEEEEEeCCCCcceeEecchhhhhc
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADG-PAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRA 141 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG-v~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~~ 141 (564)
+.|++++||+|++ +|....++++|+++...+.. .|. ........+.||++++++| .++|+|+|||+.| ...
T Consensus 18 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H-~~~ 89 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKL---TAAGEYGYYCEPH-QGA 89 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECGGG-GGG
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEe---CCCeEEEEEcCCc-ccc
Confidence 6899999998765 79887899999998643211 110 0001124689999999887 3799999999932 336
Q ss_pred ceeeeEEEe
Q 008484 142 TVYGAIVIM 150 (564)
Q Consensus 142 Gl~G~iiV~ 150 (564)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 2plt_A 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 84
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.64 E-value=9.5e-08 Score=83.78 Aligned_cols=98 Identities=20% Similarity=0.210 Sum_probs=70.4
Q ss_pred eEEeecCCEEEEEEEeCCCCCCCCCCeeecCC--ceEEEe-ec-----CCCCCCCCCCCCCCCCCCCcceeeEecCCCEE
Q 008484 441 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGY--NFFVVG-TG-----IGNFDPVKYPANYNLVDPIERNTAAVPTGGWT 512 (564)
Q Consensus 441 ~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~--~F~Vv~-~g-----~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~ 512 (564)
.+.++.|++|+|++.|.+ .....|.||++.. .+.-+. .+ ...|-+.. -....+++|..|.+|...
T Consensus 34 ~i~v~~G~tV~~~~~N~~-~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQN-NLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECC-SSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCC-CCCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 467899999999999932 1267999999853 121000 00 00010000 012346789999999999
Q ss_pred EEEEEecCceeeEEEeechhchhcccEEEEEEe
Q 008484 513 AIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 513 ~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.+.|.++.||.|.|||++..|...||.+.+.|.
T Consensus 107 ~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999886
No 85
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.63 E-value=8e-08 Score=83.18 Aligned_cols=79 Identities=11% Similarity=0.216 Sum_probs=57.3
Q ss_pred CCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecch
Q 008484 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 136 (564)
Q Consensus 57 Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~ 136 (564)
+..|--+.|++++||+|++ .|....++++++.... +|........+.||++++|+| +++|+|+|+|..
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4455447999999999865 4887777777765422 121112223578999999888 479999999987
Q ss_pred hhhhcceeeeEEEe
Q 008484 137 FWLRATVYGAIVIM 150 (564)
Q Consensus 137 ~~~~~Gl~G~iiV~ 150 (564)
|. ||.|.|+|+
T Consensus 122 H~---gM~G~I~V~ 132 (132)
T 3c75_A 122 HP---FMRGKVIVE 132 (132)
T ss_dssp CT---TCEEEEEEC
T ss_pred Cc---CCEEEEEEC
Confidence 54 999999985
No 86
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.61 E-value=8.6e-08 Score=78.48 Aligned_cols=80 Identities=19% Similarity=0.190 Sum_probs=56.5
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecchhhhhcc
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRAT 142 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~~G 142 (564)
+.|++++||+|+++ |....+++++.++...++. ..++.. .....+.||++++++| .++|+|+|||+.| ...|
T Consensus 19 ~~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~pg~-~~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADGVPAD-TAAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSSSCHH-HHHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCCCCcc-cccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 68999999987654 8777789999887543200 000000 1124689999999887 4799999999932 3369
Q ss_pred eeeeEEEe
Q 008484 143 VYGAIVIM 150 (564)
Q Consensus 143 l~G~iiV~ 150 (564)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999985
No 87
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.58 E-value=1.3e-07 Score=76.20 Aligned_cols=73 Identities=21% Similarity=0.288 Sum_probs=54.7
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecchhhhhcc
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRAT 142 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~~G 142 (564)
+.|++++||+|++ .|....+++++.++... +. .....+.||+++++.| +++|+|+|||+.| ...|
T Consensus 19 ~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~----~~-----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H-~~~g 83 (91)
T 1bxv_A 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQPE----LS-----HKDLAFSPGETFEATF---SEPGTYTYYCEPH-RGAG 83 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTCGG----GC-----EEEEECSTTCEEEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCc----cC-----cccceeCCCCEEEEEe---CCCEEEEEEeCCC-ccCC
Confidence 6899999999865 58777788998887210 00 1124689999988877 5799999999943 2359
Q ss_pred eeeeEEEe
Q 008484 143 VYGAIVIM 150 (564)
Q Consensus 143 l~G~iiV~ 150 (564)
|.|.|+|+
T Consensus 84 M~g~i~V~ 91 (91)
T 1bxv_A 84 MVGKIVVQ 91 (91)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 88
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.54 E-value=2e-07 Score=76.15 Aligned_cols=77 Identities=17% Similarity=0.216 Sum_probs=54.8
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCC--ccccccCCCCeEEEEEEeCCCCcceeEecchhhhh
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAY--ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLR 140 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~--~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~ 140 (564)
+.|++++||+|+ +.|....+++++.++.... +|... .....+.||+++++.| .++|+|+|||+.| ..
T Consensus 19 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTVE--FVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEEE--EEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 689999999865 5587667788777764431 11000 0124579999999877 5799999999932 33
Q ss_pred cceeeeEEEe
Q 008484 141 ATVYGAIVIM 150 (564)
Q Consensus 141 ~Gl~G~iiV~ 150 (564)
.||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 6999999984
No 89
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.50 E-value=2.3e-07 Score=76.52 Aligned_cols=82 Identities=15% Similarity=0.072 Sum_probs=54.3
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCC--CCCCCCCc--cccccCCCCeEEEEEEeCCCCcceeEecchhh
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNG--WADGPAYI--TQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFW 138 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~--~~DGv~~~--~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~ 138 (564)
+.|++++||+|+ +.|....+++++.+.-...... .++..++. ....+.||+++++.| .++|+|+|||+ .+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~-~H 90 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCT-PH 90 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECS-TT
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeC-CC
Confidence 689999999977 4588767888877621100000 00000111 224589999999877 57999999999 33
Q ss_pred hhcceeeeEEEe
Q 008484 139 LRATVYGAIVIM 150 (564)
Q Consensus 139 ~~~Gl~G~iiV~ 150 (564)
...||.|.|+|+
T Consensus 91 ~~~gM~G~i~V~ 102 (102)
T 1kdj_A 91 KSANMKGTLTVK 102 (102)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 336999999985
No 90
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.50 E-value=4.4e-07 Score=74.31 Aligned_cols=77 Identities=13% Similarity=0.203 Sum_probs=56.0
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCC------CccccccCCCCeEEEEEEeCCCCcceeEecch
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPA------YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 136 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~------~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~ 136 (564)
+.|++++||+|+ ++|....+++++.++.... +|.. ......+.||+++++.| .++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKIT--FKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEEcCC
Confidence 589999999865 5788877888888874321 2211 01123579999999887 379999999993
Q ss_pred hhhhcceeeeEEEe
Q 008484 137 FWLRATVYGAIVIM 150 (564)
Q Consensus 137 ~~~~~Gl~G~iiV~ 150 (564)
+...||.|.|+|+
T Consensus 87 -H~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 -HAGAGMVGKVTVN 99 (99)
T ss_dssp -GTTTTCEEEEEEC
T ss_pred -ccccCCEEEEEEC
Confidence 2336999999984
No 91
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.49 E-value=3.7e-07 Score=77.59 Aligned_cols=75 Identities=13% Similarity=0.108 Sum_probs=53.0
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecchhhhhcc
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRAT 142 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~~G 142 (564)
..|+|++||+|++.+.|. ++++..+.. .+-+|. ....+.||++++|+| +++|+|||+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~---~~f~~~pg~t~s~TF---~~pG~y~y~C~~H~-~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTPHF-GMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGGGT-TTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCCC-cCC
Confidence 699999999988887772 344443321 112332 123467999998888 56999999999432 379
Q ss_pred eeeeEEEeCC
Q 008484 143 VYGAIVIMPK 152 (564)
Q Consensus 143 l~G~iiV~~~ 152 (564)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999964
No 92
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.49 E-value=2.3e-07 Score=79.36 Aligned_cols=76 Identities=16% Similarity=0.166 Sum_probs=53.4
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecchhhhhcc
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRAT 142 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~~G 142 (564)
+.|+|++||+|++.+.|. ++++..+... +-||. ....+.||++++|+| +++|+|||||..| ...|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~~-----~P~g~---~~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKGG-----APEGA---ETWKGKINEEITVTL---SKPGVYMYQCAPH-VGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTTC-----SCTTC---CCCBCCTTCCCEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccCc-----CCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 699999999988776663 4444333211 12222 123457999988888 5799999999954 3479
Q ss_pred eeeeEEEeCCC
Q 008484 143 VYGAIVIMPKP 153 (564)
Q Consensus 143 l~G~iiV~~~~ 153 (564)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999764
No 93
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.49 E-value=4.8e-07 Score=74.08 Aligned_cols=77 Identities=12% Similarity=0.217 Sum_probs=55.4
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCC------CccccccCCCCeEEEEEEeCCCCcceeEecch
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPA------YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 136 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~------~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~ 136 (564)
+.|++++||+|++ +|....+++++.++...+ +|.. ......+.||++++++| .++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE---CCCceEEEEcCC
Confidence 6999999998755 788777888887764321 1110 01113579999998877 379999999993
Q ss_pred hhhhcceeeeEEEe
Q 008484 137 FWLRATVYGAIVIM 150 (564)
Q Consensus 137 ~~~~~Gl~G~iiV~ 150 (564)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 2 336999999984
No 94
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.48 E-value=4.4e-07 Score=74.17 Aligned_cols=79 Identities=16% Similarity=0.255 Sum_probs=59.0
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCc-ceeeEecCCCEEEEEEEe
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIE-RNTAAVPTGGWTAIRFRA 518 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vp~~g~~~irf~a 518 (564)
..+.++.|++|.|+ |.+ ...|.+|+++..+- +. ..+.+ .|+..+.+|....+.|
T Consensus 19 ~~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~----------------~~~~~~~~~~~~~pG~~~~~tf-- 73 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--AD----------------TAAKLSHKGLLFAAGESFTSTF-- 73 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HH----------------HHHHHCEEEEECSTTCEEEEEC--
T ss_pred CEEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cc----------------ccccccccccccCCCCEEEEEc--
Confidence 34688999999987 533 46899999875321 00 00111 5788899998887766
Q ss_pred cCceeeEEEeechhchhcccEEEEEEe
Q 008484 519 DNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 519 dnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
+.||.|.|||| .|.+.||.+.+.|.
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCCeEEEEEcC--CccccCCeEEEEEC
Confidence 79999999999 79999999999873
No 95
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.47 E-value=4e-07 Score=74.42 Aligned_cols=81 Identities=17% Similarity=0.252 Sum_probs=59.5
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|++|+| .|.+ ...|.+|+|+..+ . ...+. ...++|+..+.+|....++| +
T Consensus 18 ~~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~----------p-----~~~~~-~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNA---GFPHNIVFDEDAI----------P-----SGVNA-DAISRDDYLNAPGETYSVKL--T 74 (98)
T ss_dssp SEEEECTTCEEEE--EECS---SCCEEEEECGGGS----------C-----TTCCH-HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCC----------C-----Ccccc-ccccccceecCCCCEEEEEe--C
Confidence 3477899999988 4643 5689999997532 0 00000 01246888999999887765 5
Q ss_pred CceeeEEEeechhchhcccEEEEEEe
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.||.|.|||| .|.+.||.+.+.|.
T Consensus 75 ~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 75 AAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp SCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 8999999999 79999999999873
No 96
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.45 E-value=4e-07 Score=77.25 Aligned_cols=75 Identities=8% Similarity=-0.027 Sum_probs=52.8
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecchhhhhcc
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRAT 142 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~~G 142 (564)
..|+|++||+|++. |.. .++++..+.... -+|. ....+.||++++|+| +++|+|+|||..| ..+|
T Consensus 22 ~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKFV--PTD-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEEEE--CSS-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEE--ECC-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 69999999997655 443 566666553211 1222 123467999999888 4699999999743 2369
Q ss_pred eeeeEEEeCC
Q 008484 143 VYGAIVIMPK 152 (564)
Q Consensus 143 l~G~iiV~~~ 152 (564)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
No 97
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.41 E-value=7.8e-07 Score=71.51 Aligned_cols=73 Identities=21% Similarity=0.381 Sum_probs=56.9
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|+.|.|+ |.+ ...|.+|+|+.. +...++..+.+|....+.| +
T Consensus 19 ~~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~ 67 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--S 67 (91)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--C
Confidence 34678999999887 532 468999988721 0124677889998777765 8
Q ss_pred CceeeEEEeechhchhcccEEEEEEe
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.||.|.|||| .|.+.||.+.+.|+
T Consensus 68 ~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 68 EPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCEEEEEEeC--CCccCCCEEEEEEC
Confidence 9999999999 89999999999873
No 98
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.35 E-value=8.7e-07 Score=72.22 Aligned_cols=79 Identities=22% Similarity=0.402 Sum_probs=58.1
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|++|+|+ |.+ ...|.+++++..+ ..+. ....+++..+.+|....+.| +
T Consensus 19 ~~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----~~~~-------------~~~~~~~~~~~~g~~~~~tf--~ 73 (97)
T 1b3i_A 19 KALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----GESA-------------PALSNTKLAIAPGSFYSVTL--G 73 (97)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----TSCH-------------HHHCBCCCCCSCSCCEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----cccc-------------ccccccceecCCCCEEEEEe--C
Confidence 34688999999887 533 4689999987644 0000 00114667788888877766 8
Q ss_pred CceeeEEEeechhchhcccEEEEEEe
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.||.|.|||+ .|.+.||.+.+.|.
T Consensus 74 ~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 74 TPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp SCSEEEEECS--STTTTTCEEEEEEC
T ss_pred CCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 9999999999 89999999999873
No 99
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.33 E-value=1e-06 Score=75.50 Aligned_cols=93 Identities=11% Similarity=0.020 Sum_probs=60.9
Q ss_pred cCCCCeEEeecC-CEEEEEEEeCCCCC-----cee--eeCCCCC-------------CCCCCCCCCCCccccccCCCCeE
Q 008484 59 RFPGPTIYVREG-DRVLVNVTNHAQYN-----MSI--HWHGLKQ-------------YRNGWADGPAYITQCPIKTGNSY 117 (564)
Q Consensus 59 ~~pgP~i~v~~G-d~v~v~l~N~l~~~-----~~i--H~HG~~~-------------~~~~~~DGv~~~~~~~i~PG~~~ 117 (564)
+|--..|.|++| |+|+|+|+|....+ +++ --+|... ...+..|.........|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 442258999999 99999999987543 443 2222100 00000111000011347999999
Q ss_pred EEEEEeC--CCCcceeEecchhhhhcceeeeEEEeC
Q 008484 118 TYDFNVT--GQRGTLWWHAHIFWLRATVYGAIVIMP 151 (564)
Q Consensus 118 ~y~~~~~--~~~Gt~wYH~h~~~~~~Gl~G~iiV~~ 151 (564)
++.|+++ .++|+|||.|...++..||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 9999973 289999999988776669999999963
No 100
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.31 E-value=2.2e-06 Score=71.85 Aligned_cols=75 Identities=17% Similarity=0.337 Sum_probs=57.9
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|+.|+|++.|.+ ...|-|++... .-+..++||....+.|.++
T Consensus 38 ~~i~v~~G~~V~~~~~n~d---~~~H~~~i~~~----------------------------~~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKS---PISEGFSIDAF----------------------------GVQEVIKAGETKTISFTAD 86 (112)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCEEEEEGGG----------------------------TEEEEECTTCEEEEEEECC
T ss_pred CEEEEeCCCEEEEEEEECC---CCeEEEEEcCC----------------------------CceeEeCCCCEEEEEEECC
Confidence 4578899999999999964 33444443321 1256799999999999999
Q ss_pred CceeeEEEeechhchhcccEEEEEEec
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVED 546 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~~ 546 (564)
.||.|.||||+..|... |.+.+.|.+
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 99999999999887554 998888863
No 101
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.29 E-value=1.1e-06 Score=71.82 Aligned_cols=83 Identities=16% Similarity=0.174 Sum_probs=58.3
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|++|+| .|.+ ...|.+|+++..|. . + ++. .. ....+|++.+.+|....+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~--g-~~~------~~--~~~~~~~~~~~~G~~~~~~f--~ 75 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---A--G-VDV------TK--ISMPEEDLLNAPGEEYSVTL--T 75 (99)
T ss_dssp SEEEECTTEEEEE--EECS---SCCBCCEECTTSSC---T--T-CCH------HH--HSCCTTCCBCSTTCEEEEEE--C
T ss_pred CEEEECCCCEEEE--EECC---CCcceEEEeCCCCc---c--c-ccc------cc--ccccccceeeCCCCEEEEEe--C
Confidence 3467899999888 4543 56899999975430 0 0 000 00 01125667888998877766 5
Q ss_pred CceeeEEEeechhchhcccEEEEEEe
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.||.|.|||+ .|.+.||.+.+.|.
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 76 EKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCcEEEEEcC--CccccCCEEEEEEC
Confidence 8999999999 79999999999873
No 102
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.28 E-value=4e-06 Score=69.49 Aligned_cols=79 Identities=11% Similarity=0.213 Sum_probs=54.7
Q ss_pred CCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecch
Q 008484 57 NGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 136 (564)
Q Consensus 57 Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~ 136 (564)
+..|--..|++++||+|++. |....++++....... |........+.||+++++.| .++|+|+|+|..
T Consensus 28 ~~~F~P~~i~V~~G~tV~~~--N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVYWV--NGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEEEE--ECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEEEE--ECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 33443369999999998654 8876666665543221 11011112478999998888 479999999988
Q ss_pred hhhhcceeeeEEEe
Q 008484 137 FWLRATVYGAIVIM 150 (564)
Q Consensus 137 ~~~~~Gl~G~iiV~ 150 (564)
|. ||.|.|+|+
T Consensus 96 H~---~M~G~I~V~ 106 (106)
T 1id2_A 96 HP---FMRGKVIVE 106 (106)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 64 999999984
No 103
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.25 E-value=3.2e-06 Score=75.47 Aligned_cols=93 Identities=10% Similarity=0.034 Sum_probs=60.9
Q ss_pred cCCCCeEEe-ecCCEEEEEEEeCCCCC-----ceee--eCCCCC------------CCCCCCCCCCCccccccCCCCeEE
Q 008484 59 RFPGPTIYV-REGDRVLVNVTNHAQYN-----MSIH--WHGLKQ------------YRNGWADGPAYITQCPIKTGNSYT 118 (564)
Q Consensus 59 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH--~HG~~~------------~~~~~~DGv~~~~~~~i~PG~~~~ 118 (564)
+|--..|.| ++||+|+|+|+|....+ |++- -+|... ......|.........|.||++.+
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 553258999 99999999999997654 4322 222100 000001110000113579999999
Q ss_pred EEEEeC-CCCcceeEecchhhhhcceeeeEEEeC
Q 008484 119 YDFNVT-GQRGTLWWHAHIFWLRATVYGAIVIMP 151 (564)
Q Consensus 119 y~~~~~-~~~Gt~wYH~h~~~~~~Gl~G~iiV~~ 151 (564)
+.|+++ -++|+|||+|...++..||.|-|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 999872 179999999988777669999999973
No 104
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.24 E-value=2e-06 Score=70.27 Aligned_cols=77 Identities=14% Similarity=0.109 Sum_probs=54.5
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCC----ccccccCCCCeEEEEEEeCCCCcceeEecchhh
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFW 138 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~----~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~ 138 (564)
+.|++++||+|++ .|....++++....-.. -+|... .....+.||++++++| .++|+|+|+|..|.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 6999999999665 58776788877664221 122210 0113589999998877 57999999998732
Q ss_pred hhcceeeeEEEe
Q 008484 139 LRATVYGAIVIM 150 (564)
Q Consensus 139 ~~~Gl~G~iiV~ 150 (564)
.+||.|.|+|+
T Consensus 88 -~~gM~G~I~V~ 98 (98)
T 1iuz_A 88 -GAGMKMTITVQ 98 (98)
T ss_dssp -GGTCEEEEEEC
T ss_pred -cCCCEEEEEEC
Confidence 36999999985
No 105
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.21 E-value=4.3e-06 Score=68.46 Aligned_cols=72 Identities=19% Similarity=0.385 Sum_probs=57.7
Q ss_pred eEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEecC
Q 008484 441 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 520 (564)
Q Consensus 441 ~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 520 (564)
.+.++.|+.|+|++.|.+ ...|.|.+.+..+ ...+.+|....+.|+++.
T Consensus 29 ~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCCS
T ss_pred EEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEeccc
Confidence 468899999999999964 4566666544322 235778888999999999
Q ss_pred ceeeEEEeechhchhcccEEEEEEe
Q 008484 521 PGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 521 pG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
||.|.|+|. .|...||.+.+.|+
T Consensus 78 ~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 78 AGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CceEEEECc--cccCCCCEEEEEEC
Confidence 999999996 69999999999874
No 106
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.17 E-value=5e-06 Score=70.68 Aligned_cols=75 Identities=13% Similarity=0.152 Sum_probs=49.8
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecchhhhhcc
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRAT 142 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~~G 142 (564)
+.|++++||+|++...|. ++++..+ ...+.||.. .....||++++|+| +++|+|+|+|..| ..+|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~-----~~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H-~~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVDK---GHNVESI-----KDMIPEGAE---KFKSKINENYVLTV---TQPGAYLVKCTPH-YAMG 85 (123)
T ss_dssp SEEEECTTCEEEEEESSS---SCCCEEC-----TTCSCTTCC---CCBCCTTCCEEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---CeEEEEe-----cccCCCCcc---ceecCCCCEEEEEe---CCCEEEEEEeCCc-ccCC
Confidence 699999999976654442 4444332 111122221 12346999888777 5699999999843 2369
Q ss_pred eeeeEEEeCC
Q 008484 143 VYGAIVIMPK 152 (564)
Q Consensus 143 l~G~iiV~~~ 152 (564)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999874
No 107
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.15 E-value=4.6e-06 Score=70.92 Aligned_cols=76 Identities=12% Similarity=0.174 Sum_probs=50.5
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecchhhhhcc
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRAT 142 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~~G 142 (564)
+.|++++||+|++ .|... ++++..+ ...+.||.. ...+.||++++|+| +++|+|+|+|..| ...|
T Consensus 21 ~~i~V~~GdtV~f--~n~~~-~H~v~~~-----~~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H-~~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIKF--LPTDK-GHNVETI-----KGMAPDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCAPH-YMMG 85 (123)
T ss_dssp SEEEECTTCEEEE--ECSSS-SCCCEEC-----TTSSCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECSTT-TTTT
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEe-----cccCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCc-cccC
Confidence 6999999999665 45432 4444333 111122321 13457999988877 4699999999853 2369
Q ss_pred eeeeEEEeCCC
Q 008484 143 VYGAIVIMPKP 153 (564)
Q Consensus 143 l~G~iiV~~~~ 153 (564)
|.|.|+|.++.
T Consensus 86 M~G~I~V~~~~ 96 (123)
T 1pmy_A 86 MVALVVVGDKR 96 (123)
T ss_dssp CEEEEEESSCC
T ss_pred CEEEEEEcCCC
Confidence 99999999753
No 108
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.13 E-value=1e-05 Score=69.20 Aligned_cols=91 Identities=15% Similarity=0.130 Sum_probs=59.8
Q ss_pred cCCCCeEEe-ecCCEEEEEEEeCCCCC-----ceeee--CCCCC-------------CCCCCCCCCCCc-cccccCCCCe
Q 008484 59 RFPGPTIYV-REGDRVLVNVTNHAQYN-----MSIHW--HGLKQ-------------YRNGWADGPAYI-TQCPIKTGNS 116 (564)
Q Consensus 59 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH~--HG~~~-------------~~~~~~DGv~~~-~~~~i~PG~~ 116 (564)
+|--..|.| ++||+|+|+|+|....+ +++-+ +|... ...+..|.. .+ ....|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~l~pGet 92 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTR-VIAHTKVIGGGES 92 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTT-EEEECCCBCTTCE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccccccccc-ceeeeeEECCCCE
Confidence 443258999 99999999999997654 44322 22000 000001110 01 1124799999
Q ss_pred EEEEEEeCC--CCcc-eeEecchhhhhcceeeeEEEeC
Q 008484 117 YTYDFNVTG--QRGT-LWWHAHIFWLRATVYGAIVIMP 151 (564)
Q Consensus 117 ~~y~~~~~~--~~Gt-~wYH~h~~~~~~Gl~G~iiV~~ 151 (564)
.++.|++ . ++|+ |||.|...++..||.|.|+|.+
T Consensus 93 ~svtf~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 93 DSVTFDV-SKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EEEEEEG-GGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred EEEEEec-cccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 9999997 4 5665 9999988777779999999963
No 109
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.12 E-value=1.1e-05 Score=68.85 Aligned_cols=92 Identities=13% Similarity=0.141 Sum_probs=60.7
Q ss_pred cCCCCeEEe-ecCCEEEEEEEeCCCCC-----ceeeeCCC---------------CCCCCCCCCCCCCccccccCCCCeE
Q 008484 59 RFPGPTIYV-REGDRVLVNVTNHAQYN-----MSIHWHGL---------------KQYRNGWADGPAYITQCPIKTGNSY 117 (564)
Q Consensus 59 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH~HG~---------------~~~~~~~~DGv~~~~~~~i~PG~~~ 117 (564)
+|--..|.| ++||+|+|+|+|....+ +++-+-.- .....+..|.........|.||++.
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 443258999 99999999999998664 55332110 0000000111000011247999999
Q ss_pred EEEEEeCC--CCcc-eeEecchhhhhcceeeeEEEeC
Q 008484 118 TYDFNVTG--QRGT-LWWHAHIFWLRATVYGAIVIMP 151 (564)
Q Consensus 118 ~y~~~~~~--~~Gt-~wYH~h~~~~~~Gl~G~iiV~~ 151 (564)
++.|++ . ++|+ |+|.|...++..||.|.|+|.+
T Consensus 93 ~vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 999997 4 6885 9999998777779999999963
No 110
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.11 E-value=5.1e-06 Score=68.28 Aligned_cols=85 Identities=12% Similarity=0.094 Sum_probs=57.2
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCc-ceeeEecCCCEEEEEEEe
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIE-RNTAAVPTGGWTAIRFRA 518 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vp~~g~~~irf~a 518 (564)
..+.++.|++|+|+ |.+ ...|.++++.-... .+.+... . ..+.+ .+++.+.+|....+.|
T Consensus 17 ~~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~-----~~~~~~~------~-~~~~~~~~~~~~~pG~~~~~tf-- 77 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVG---ETGHNIVFDIPAGA-----PGTVASE------L-KAASMDENDLLSEDEPSFKAKV-- 77 (102)
T ss_dssp SEEEECTTCCEEEE--ECS---SSCBCCEECCCTTC-----CHHHHHH------H-HHTSCCTTCCBBTTBCEEEECC--
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCcccc-----cccccch------h-hcccccccceecCCCCEEEEEe--
Confidence 45688999999986 543 46899998731100 0000000 0 00122 3667788988877766
Q ss_pred cCceeeEEEeechhchhcccEEEEEEe
Q 008484 519 DNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 519 dnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
+.||.|.|||+ .|.+.||.+.+.|.
T Consensus 78 ~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 78 STPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 89999999999 99999999999873
No 111
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.11 E-value=1.3e-05 Score=68.54 Aligned_cols=91 Identities=12% Similarity=0.098 Sum_probs=59.6
Q ss_pred cCCCCeEEe-ecCCEEEEEEEeCCCCC-----ceeee--CCCC-------CCCCCCCC-----CCCCcc-ccccCCCCeE
Q 008484 59 RFPGPTIYV-REGDRVLVNVTNHAQYN-----MSIHW--HGLK-------QYRNGWAD-----GPAYIT-QCPIKTGNSY 117 (564)
Q Consensus 59 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH~--HG~~-------~~~~~~~D-----Gv~~~~-~~~i~PG~~~ 117 (564)
+|--..|.| ++||+|+|+|+|....+ +++-. .+.. +.....+| ....+. ...|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 443258999 99999999999997654 55332 2110 00000011 100011 1248999999
Q ss_pred EEEEEeCC--CCcc-eeEecchhhhhcceeeeEEEe
Q 008484 118 TYDFNVTG--QRGT-LWWHAHIFWLRATVYGAIVIM 150 (564)
Q Consensus 118 ~y~~~~~~--~~Gt-~wYH~h~~~~~~Gl~G~iiV~ 150 (564)
++.|++ . ++|+ |+|.|...++..||.|-|+|.
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 999997 4 5776 999999877766999999984
No 112
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.03 E-value=1.2e-05 Score=68.23 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=50.6
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecchhhhhcc
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIFWLRAT 142 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~~~~~~G 142 (564)
+.|+|++||+|++. |... .++++...- .+.+|. ....+.||++++|+| +++|+|+|+|..|..
T Consensus 21 ~~i~V~~GdtV~f~--n~d~-~H~v~~~~~-----~~p~~~---~~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTFI--PTDK-GHNVETIKG-----MIPDGA---EAFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEEE--ESSS-SCCCEECTT-----CSCTTC---CCCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEEE--ECCC-CcEEEEccc-----ccCCCc---ceeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 69999999987654 5543 455444331 112221 113457999998888 468999999987544
Q ss_pred eeeeEEEeCCC
Q 008484 143 VYGAIVIMPKP 153 (564)
Q Consensus 143 l~G~iiV~~~~ 153 (564)
|.|.|+|.+..
T Consensus 84 M~G~I~V~~~p 94 (122)
T 2ux6_A 84 MVGVVQVGDAP 94 (122)
T ss_dssp EEEEEEESSSC
T ss_pred CEEEEEEeCCC
Confidence 99999998743
No 113
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.03 E-value=2.1e-05 Score=82.47 Aligned_cols=96 Identities=22% Similarity=0.337 Sum_probs=66.0
Q ss_pred cCCce--eeEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEe
Q 008484 46 RLCHA--KPIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNV 123 (564)
Q Consensus 46 ~~g~~--~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~ 123 (564)
++|.. ..+...+-.|--+.|+|++||+|++.|+|.....-.+ ||+.+.. -|+ ...+.||++.++.|++
T Consensus 539 RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPs----lGI----K~DaiPGrtnsvtFta 608 (638)
T 3sbq_A 539 RDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVN----HGV----SMEISPQQTSSITFVA 608 (638)
T ss_dssp EETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETT----TTE----EEEECTTCEEEEEEEC
T ss_pred cCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecC----CCc----eeeeCCCCeEEEEEEc
Confidence 34543 3444555566557999999999999999974321122 2222221 111 1357899999999998
Q ss_pred CCCCcceeEecchh--hhhcceeeeEEEeCC
Q 008484 124 TGQRGTLWWHAHIF--WLRATVYGAIVIMPK 152 (564)
Q Consensus 124 ~~~~Gt~wYH~h~~--~~~~Gl~G~iiV~~~ 152 (564)
+++|+|||+|..- ....+|.|.|+|+|+
T Consensus 609 -dkPGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 609 -DKPGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp -CSCEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred -CCCEEEEEECCCcCCCCcccceEEEEEecC
Confidence 8999999999963 222689999999974
No 114
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.98 E-value=1.3e-05 Score=65.48 Aligned_cols=83 Identities=16% Similarity=0.200 Sum_probs=57.1
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|++|+| .|.+ ...|.++++...+. . + .+ ... ....++.+.+.+|....+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p---~--~-~~------~~~--~~~~~~~~~~~~G~~~~~tf--~ 75 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP---S--G-VD------ASK--ISMSEEDLLNAKGETFEVAL--S 75 (99)
T ss_dssp SEEEECTTCEEEE--EECS---SCCBCCEECTTSSC---T--T-CC------HHH--HCCCTTCCBCSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCCc---c--c-cc------ccc--cccccCccccCCCCEEEEEE--C
Confidence 4578899999988 4543 56899998875320 0 0 00 000 00123456788888777755 6
Q ss_pred CceeeEEEeechhchhcccEEEEEEe
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.||.|.|||+ .|...||.+.+.|.
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC--CCcccCCEEEEEEC
Confidence 9999999999 79999999999873
No 115
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.88 E-value=8.6e-05 Score=65.73 Aligned_cols=85 Identities=16% Similarity=0.321 Sum_probs=60.5
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCccee-------eEecCCC--
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNT-------AAVPTGG-- 510 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDT-------v~vp~~g-- 510 (564)
+.+.++.|+.|.+++.|.+ ....|-|-++.. +. .+.. .|...+. ..|.||.
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~~-------~~-~~~~----------~~~~~~~~~~~~~~~~i~PG~sg 120 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITKK-------GP-PYAV----------MPVIDPIVAGTGFSPVPKDGKFG 120 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEESC-------CS-CCCS----------SCCCCSEEEEBCCCCCCBTTBEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEeec-------Cc-chhc----------cccccccccccccccccCCCCce
Confidence 4688999999999999953 244566555522 10 1100 0001111 2567888
Q ss_pred EEEEEEEecCceeeEEEeechhchhcccEEEEEEe
Q 008484 511 WTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 511 ~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
...++|++ .||.|.||||+.-|...||-+.+.|.
T Consensus 121 t~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 121 YTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 89999999 99999999999999999999999873
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.84 E-value=5.7e-05 Score=80.80 Aligned_cols=78 Identities=18% Similarity=0.361 Sum_probs=63.1
Q ss_pred eeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEe
Q 008484 439 TRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA 518 (564)
Q Consensus 439 ~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a 518 (564)
.+.+.++.|+.|+|++.|.....+..|.|+++++.+. ..+.||....++|++
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta 563 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVA 563 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEEC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEEC
Confidence 4557899999999999996422345799988875321 368889999999999
Q ss_pred cCceeeEEEee---chhchhcccEEEEEEec
Q 008484 519 DNPGVWFMHCH---LELHTGWGLKTAFAVED 546 (564)
Q Consensus 519 dnpG~wl~HCH---il~H~d~GM~~~~~V~~ 546 (564)
+.||.|.|||| ...|. ||.+.+.|.+
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp CSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 99999999999 45775 9999999875
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.84 E-value=6.1e-05 Score=62.11 Aligned_cols=73 Identities=16% Similarity=0.282 Sum_probs=50.5
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|+.|+|+ |.+ ...|.+|.|... .|. .. -+.-.+.+|....+.| +
T Consensus 33 ~~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~-------~~--------~~~~~~~pG~~~~~tf--~ 83 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE-------AA--------LKGPMMKKEQAYSLTF--T 83 (105)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS-------SC--------EECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc-------cc--------ccccccCCCCEEEEEe--C
Confidence 45788999999886 643 568999988522 010 00 1122467887665555 8
Q ss_pred CceeeEEEeechhchhcccEEEEEEe
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.||.|.|||++ |. ||.+.+.|.
T Consensus 84 ~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 84 EAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999998 65 999998873
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.57 E-value=0.00034 Score=58.75 Aligned_cols=89 Identities=13% Similarity=0.145 Sum_probs=55.3
Q ss_pred cCCCCeEEeec-CCEEEEEEEeCCCCC-----ceeee--------C---CCCC----CCCCCCCCCCCccccccCCCCeE
Q 008484 59 RFPGPTIYVRE-GDRVLVNVTNHAQYN-----MSIHW--------H---GLKQ----YRNGWADGPAYITQCPIKTGNSY 117 (564)
Q Consensus 59 ~~pgP~i~v~~-Gd~v~v~l~N~l~~~-----~~iH~--------H---G~~~----~~~~~~DGv~~~~~~~i~PG~~~ 117 (564)
+|--..|.|++ |++|+|+|+|....+ +++-. | |+.. ...+..|...-.....|.||++.
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 34336899986 999999999998653 44222 1 1110 00000111100111247999999
Q ss_pred EEEEEeC--CCCcceeEecchhhhhcceeeeEEEe
Q 008484 118 TYDFNVT--GQRGTLWWHAHIFWLRATVYGAIVIM 150 (564)
Q Consensus 118 ~y~~~~~--~~~Gt~wYH~h~~~~~~Gl~G~iiV~ 150 (564)
+..|+.+ .++|+|.|.|. ++. ||.|.++|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 9999983 27899999999 444 999999884
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.17 E-value=0.00078 Score=57.26 Aligned_cols=76 Identities=21% Similarity=0.295 Sum_probs=50.3
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|++|+|++.|. .|-+..+... + +.. ...+.+.+|....+ +++
T Consensus 23 ~~i~V~~GDtVtf~n~~~------~H~v~~~~~~----------~-P~g------------~~~f~s~pGet~s~--TF~ 71 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK------GHNSALMKGG----------A-PEG------------AETWKGKINEEITV--TLS 71 (127)
T ss_dssp SEEEECTTCEEEEECSSS------SCCCEECTTC----------S-CTT------------CCCCBCCTTCCCEE--ECC
T ss_pred CEEEECCCCEEEEEECCC------CceEEEccCc----------C-CCC------------ccceecCCCCEEEE--EeC
Confidence 457889999999987651 4555543210 0 000 01122346665444 448
Q ss_pred CceeeEEEeechhchhcccEEEEEEecCC
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVEDGP 548 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~~~~ 548 (564)
.||.|.|||- .|...||.+.+.|.++.
T Consensus 72 ~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 72 KPGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 9999999999 69999999999998754
No 120
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.16 E-value=0.0011 Score=56.08 Aligned_cols=75 Identities=16% Similarity=0.208 Sum_probs=51.0
Q ss_pred eEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEecC
Q 008484 441 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 520 (564)
Q Consensus 441 ~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 520 (564)
.+.++.|++|+|+..+ ..|.+..+.. .+.. -.+.+.+.+|....+.| +.
T Consensus 23 ~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~-------------g~~~~~~~pg~t~s~TF--~~ 71 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPE-------------GVAPVKGGFSKEVVFNA--EK 71 (124)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------TSCT-------------TSCCCBCCTTCCEEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCccEEEeCC----------cCCC-------------CccccccCCCCEEEEEe--CC
Confidence 4678999999998543 4676665421 1110 01122345666655554 89
Q ss_pred ceeeEEEeechhchhcccEEEEEEecCC
Q 008484 521 PGVWFMHCHLELHTGWGLKTAFAVEDGP 548 (564)
Q Consensus 521 pG~wl~HCHil~H~d~GM~~~~~V~~~~ 548 (564)
||.|.|||- .|...||.+.+.|.++.
T Consensus 72 ~G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 72 EGLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp SEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 999999995 89999999999998753
No 121
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.01 E-value=0.0023 Score=54.07 Aligned_cols=73 Identities=18% Similarity=0.246 Sum_probs=49.8
Q ss_pred eEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEecC
Q 008484 441 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 520 (564)
Q Consensus 441 ~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 520 (564)
.+.++.|++|+|++.| ..|-+..+.. .+. . . .+.+.+.++....+.| +.
T Consensus 22 ~i~V~~GdtV~f~~~~------~~H~v~~~~~----------~~P-~----g--------~~~f~~~pg~t~s~TF--~~ 70 (123)
T 3erx_A 22 FVRAEPGDVINFVPTD------KSHNVEAIKE----------ILP-E----G--------VESFKSKINESYTLTV--TE 70 (123)
T ss_dssp EEEECTTEEEEEEESS------TTCCCEECTT----------SSC-T----T--------CCCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC------CCceEEEcCC----------cCC-C----C--------ccceecCCCCEEEEEe--CC
Confidence 4678999999999876 1455554421 000 0 0 0112234676555555 89
Q ss_pred ceeeEEEeechhchhcccEEEEEEec
Q 008484 521 PGVWFMHCHLELHTGWGLKTAFAVED 546 (564)
Q Consensus 521 pG~wl~HCHil~H~d~GM~~~~~V~~ 546 (564)
||.|.|+|- .|...||.+.+.|.+
T Consensus 71 pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 71 PGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECC
Confidence 999999999 899999999999986
No 122
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=96.96 E-value=0.003 Score=50.98 Aligned_cols=81 Identities=22% Similarity=0.324 Sum_probs=53.1
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|+.|+|+ |.+ ...|-+.+.... +. ..++. .....+...+.+|....+.| +
T Consensus 18 ~~i~v~~GdtV~~~--n~~---~~~H~v~~~~~~----------~p-----~g~~~-~~~~~~~~~~~~g~~~~~tf--~ 74 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNA---GFPHNIVFDEDA----------VP-----AGVDA-DAISYDDYLNSKGETVVRKL--S 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECTTS----------SC-----TTCCH-HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEeCCC----------Cc-----ccccc-ccccccccccCCCCEEEEEc--C
Confidence 45788999999986 533 356766554311 00 00000 00113446788888777765 8
Q ss_pred CceeeEEEeechhchhcccEEEEEEe
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.||.|.|+|-+ |...||.+.+.|.
T Consensus 75 ~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 75 TPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCEEEEEEchh--hccCCCEEEEEEC
Confidence 99999999986 9999999998873
No 123
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.95 E-value=0.0034 Score=51.58 Aligned_cols=73 Identities=19% Similarity=0.209 Sum_probs=49.0
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|+.|+|+ |.+ ...|.+++....- + . . ..++-.+.+|....+.| +
T Consensus 34 ~~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~~-----~--~-------~--------~~~s~~l~~g~~~~~tf--~ 84 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGIV-----G--E-------D--------AFRGEMMTKDQAYAITF--N 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTTS-----S--S-------S--------CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCcEEEEEeCCCC-----C--c-------c--------cccccccCCCCEEEEEe--C
Confidence 45788999999987 543 4567666553210 0 0 0 01233567777666665 8
Q ss_pred CceeeEEEeechhchhcccEEEEEEe
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.||.|.|+|-+ |. ||.+.+.|.
T Consensus 85 ~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 85 EAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999987 76 999998873
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.82 E-value=0.0044 Score=53.08 Aligned_cols=73 Identities=19% Similarity=0.193 Sum_probs=49.7
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|+.|+|+ |.+ ...|.+++....- |. ..-++-.+.+|....+.| +
T Consensus 60 ~~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~~-------g~---------------~~~~s~~l~pG~t~~~tF--~ 110 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGIV-------GE---------------DAFRGEMMTKDQAYAITF--N 110 (132)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTTS-------SS---------------SCEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCceEEEEeCCCC-------Cc---------------ccccccccCCCCEEEEEc--C
Confidence 45788999999987 543 4577777643210 00 011233567887766665 7
Q ss_pred CceeeEEEeechhchhcccEEEEEEe
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.||.|.|||-+ |. ||.+.+.|+
T Consensus 111 ~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 111 EAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 99999999987 76 999999873
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.69 E-value=0.0089 Score=51.28 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=53.3
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecch--hhhh
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI--FWLR 140 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~--~~~~ 140 (564)
..|.++.|++|++.++|.. .. |++.... .|. ...+.||+..++.|++ +++|+|+|+|.. +...
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~----~~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEG----TNI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETT----SSC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEecC----CCc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4899999999999999973 33 3333321 111 1346899988899987 889999999954 1122
Q ss_pred cceeeeEEEeC
Q 008484 141 ATVYGAIVIMP 151 (564)
Q Consensus 141 ~Gl~G~iiV~~ 151 (564)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 58999998863
No 126
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.37 E-value=0.026 Score=50.07 Aligned_cols=74 Identities=15% Similarity=0.212 Sum_probs=54.5
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecch--hhhh
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI--FWLR 140 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~--~~~~ 140 (564)
..|.++.|+.|++.++|. +.-+ +...+.. |+ +.-+.||+..++.|++ +++|+|++.|.. +...
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViH-----sf~IP~l----gi----k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIH-----GFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCE-----EEEETTS----SC----EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-CceE-----EEEECCC----Ce----EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 589999999999999997 3333 3333211 11 1346799999999997 889999999984 3333
Q ss_pred cceeeeEEEeC
Q 008484 141 ATVYGAIVIMP 151 (564)
Q Consensus 141 ~Gl~G~iiV~~ 151 (564)
++|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 78999999873
No 127
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.17 E-value=0.018 Score=48.57 Aligned_cols=37 Identities=22% Similarity=0.438 Sum_probs=29.7
Q ss_pred cCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEecC
Q 008484 507 PTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 547 (564)
Q Consensus 507 p~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~ 547 (564)
.+|.... ++++.||.|.|+|- .|...||.+.+.|.++
T Consensus 59 ~pG~t~~--~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 59 KINENYV--LTVTQPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CTTCCEE--EECCSCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCCCEEE--EEeCCCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 4666544 45589999999997 5999999999999763
No 128
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.05 E-value=0.017 Score=48.64 Aligned_cols=38 Identities=24% Similarity=0.380 Sum_probs=30.2
Q ss_pred ecCCCEEEEEEEecCceeeEEEeechhchhcccEEEEEEecC
Q 008484 506 VPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 547 (564)
Q Consensus 506 vp~~g~~~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~ 547 (564)
+.+|....+ +++.||.|.|+|- .|...||.+.+.|.++
T Consensus 58 ~~pG~t~~~--tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVV--KFDKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEE--ECCSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred cCCCCEEEE--EeCCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 346665444 4588999999997 5999999999999863
No 129
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.81 E-value=0.04 Score=57.96 Aligned_cols=79 Identities=16% Similarity=0.274 Sum_probs=60.8
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|+.|+|++.|.....+..|.|.+.+... -+.+.||....+.|+++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI----------------------------K~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV----------------------------SMEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------------------EEEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc----------------------------eeeeCCCCeEEEEEEcC
Confidence 34679999999999999632235677777765422 12677888999999999
Q ss_pred CceeeEEEeechhch-hcccEEEEEEec
Q 008484 520 NPGVWFMHCHLELHT-GWGLKTAFAVED 546 (564)
Q Consensus 520 npG~wl~HCHil~H~-d~GM~~~~~V~~ 546 (564)
.||.|.+||...-|. +.+|.+.+.|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999976554 368999998864
No 130
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.47 E-value=0.094 Score=44.44 Aligned_cols=96 Identities=10% Similarity=0.170 Sum_probs=61.2
Q ss_pred eeEEeecC-CEEEEEEEeCCCCC--CCCCCeeecCCceEEEeecCCCCCC------CCC-CCCCCC--CCCCcceeeEec
Q 008484 440 RLSKIAFN-STIELVLQDTNLLT--VESHPFHLHGYNFFVVGTGIGNFDP------VKY-PANYNL--VDPIERNTAAVP 507 (564)
Q Consensus 440 ~~~~~~~g-~~ve~~l~n~~~~~--~~~HP~HlHG~~F~Vv~~g~g~~~~------~~~-~~~~~~--~~p~~rDTv~vp 507 (564)
.-+.++.| +.|.+++.|.+... .+.|- |-+...+. ++. .+. ..++-. ..-....+..|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~-------~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHN-------WVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBC-------CEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccc-------eEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 34788999 99999999965210 12343 43333221 000 000 000000 011233566789
Q ss_pred CCCEEEEEEEec---CceeeEEEeechhchhcccEEEEEEe
Q 008484 508 TGGWTAIRFRAD---NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 508 ~~g~~~irf~ad---npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
||....+.|.++ .||.|-|.|-+--|.. ||-+.+.|.
T Consensus 89 pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 89 GGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 999999999987 8999999999999988 899999885
No 131
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.45 E-value=0.064 Score=47.54 Aligned_cols=45 Identities=11% Similarity=0.185 Sum_probs=39.5
Q ss_pred cceeeEecCCCEEEEEEEec--CceeeEEEeechhchhcccEEEEEEe
Q 008484 500 ERNTAAVPTGGWTAIRFRAD--NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 500 ~rDTv~vp~~g~~~irf~ad--npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
...+..|.+|....|.|.++ .||.|-|+|-+--|.. ||-+.+.|.
T Consensus 120 l~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 120 VAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred hccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 34566789999999999987 8999999999999988 899999886
No 132
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.35 E-value=0.052 Score=45.58 Aligned_cols=73 Identities=18% Similarity=0.182 Sum_probs=46.3
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
..+.++.|++|.|+..+ . .|-+++... .+... .. .+.+.+|....+.| +
T Consensus 21 ~~i~V~~GdtV~f~n~d-----~-~H~v~~~~~----------~~p~~--~~-----------~~~~~~g~t~~~tF--~ 69 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTD-----K-GHNVETIKG----------MIPDG--AE-----------AFKSKINENYKVTF--T 69 (122)
T ss_dssp SEEEECTTEEEEEEESS-----S-SCCCEECTT----------CSCTT--CC-----------CCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECC-----C-CcEEEEccc----------ccCCC--cc-----------eeecCCCCEEEEEe--C
Confidence 45688999999987432 2 566666531 11100 00 11234666555554 8
Q ss_pred CceeeEEEeechhchhcccEEEEEEecC
Q 008484 520 NPGVWFMHCHLELHTGWGLKTAFAVEDG 547 (564)
Q Consensus 520 npG~wl~HCHil~H~d~GM~~~~~V~~~ 547 (564)
.||.|.|+|-+ |.. |.+.+.|.++
T Consensus 70 ~~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 70 APGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp SCEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CCEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 99999999976 766 9999999763
No 133
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.20 E-value=0.096 Score=44.77 Aligned_cols=70 Identities=20% Similarity=0.308 Sum_probs=51.2
Q ss_pred EEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEecCc
Q 008484 442 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNP 521 (564)
Q Consensus 442 ~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnp 521 (564)
+.++.|+.|+|++.|. +..|. |++-+.+ --+.+.||....+.|+++.|
T Consensus 62 l~Vp~G~~V~~~vts~----DV~Hs-------f~ip~~~---------------------~k~d~~PG~~~~~~~~~~~~ 109 (135)
T 2cua_A 62 IEVPQGAEIVFKITSP----DVIHG-------FHVEGTN---------------------INVEVLPGEVSTVRYTFKRP 109 (135)
T ss_dssp EEEETTSEEEEEEEBS----SSCEE-------EEETTSS---------------------CEEEECBTBCEEEEEECCSC
T ss_pred EEEcCCCEEEEEEEeC----Cccce-------EEecCCC---------------------ceeEeCCCCcEEEEEEcCCC
Confidence 6788999999999884 23443 3332111 01356677778899999999
Q ss_pred eeeEEEeec---hhchhcccEEEEEEe
Q 008484 522 GVWFMHCHL---ELHTGWGLKTAFAVE 545 (564)
Q Consensus 522 G~wl~HCHi---l~H~d~GM~~~~~V~ 545 (564)
|.|.++|.. ..| .+|-..++|.
T Consensus 110 G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 110 GEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEECcccCCCCc--CCCEEEEEEE
Confidence 999999987 667 5899888875
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.09 E-value=0.32 Score=41.13 Aligned_cols=43 Identities=16% Similarity=0.310 Sum_probs=37.6
Q ss_pred eeeEecCCCEEEEEEEec--Ccee-eEEEeechhchhcccEEEEEEe
Q 008484 502 NTAAVPTGGWTAIRFRAD--NPGV-WFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 502 DTv~vp~~g~~~irf~ad--npG~-wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.+..|.||....+.|.++ .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 456789999999999997 7866 999999999988 899999885
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=93.71 E-value=0.45 Score=40.08 Aligned_cols=44 Identities=16% Similarity=0.311 Sum_probs=38.5
Q ss_pred ceeeEecCCCEEEEEEEec--Ccee-eEEEeechhchhcccEEEEEEe
Q 008484 501 RNTAAVPTGGWTAIRFRAD--NPGV-WFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 501 rDTv~vp~~g~~~irf~ad--npG~-wl~HCHil~H~d~GM~~~~~V~ 545 (564)
..|..|.||....+.|.+. .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 3566789999999999987 8995 999999999998 999999885
No 136
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=93.29 E-value=0.56 Score=39.50 Aligned_cols=44 Identities=16% Similarity=0.331 Sum_probs=37.7
Q ss_pred ceeeEecCCCEEEEEEEec--Ccee-eEEEeechhchhcccEEEEEEe
Q 008484 501 RNTAAVPTGGWTAIRFRAD--NPGV-WFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 501 rDTv~vp~~g~~~irf~ad--npG~-wl~HCHil~H~d~GM~~~~~V~ 545 (564)
..|..|.||....+.|.+. .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 82 ~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 82 AHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 3455789999999999987 7876 999999999998 899998773
No 137
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=92.39 E-value=0.69 Score=40.87 Aligned_cols=73 Identities=18% Similarity=0.303 Sum_probs=54.5
Q ss_pred EEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEecCc
Q 008484 442 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNP 521 (564)
Q Consensus 442 ~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnp 521 (564)
+.++.|+.|++.+.|. +..|.|-+=.... -+.+.||....+.|.++.|
T Consensus 95 l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi----------------------------k~da~PG~~n~~~~~~~kp 142 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP----DVIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKRP 142 (168)
T ss_dssp EEEETTSEEEEEEECS----SSCEEEEETTSSC----------------------------EEEECTTBCEEEEEECCSC
T ss_pred EEEeCCCeEEEEEecC----CceEEEEECCCCe----------------------------EEEecCCceeEEEEEeCCC
Confidence 5789999999999984 4566554432211 1345678788899999999
Q ss_pred eeeEEEeec-hhchhcccEEEEEEec
Q 008484 522 GVWFMHCHL-ELHTGWGLKTAFAVED 546 (564)
Q Consensus 522 G~wl~HCHi-l~H~d~GM~~~~~V~~ 546 (564)
|.|.+.|.. --+...+|...+.|++
T Consensus 143 G~y~g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 143 GEYRIICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred EEEEEECCcCCCCCcCCCEEEEEEeC
Confidence 999999985 4466789999988863
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=91.38 E-value=0.88 Score=37.96 Aligned_cols=96 Identities=14% Similarity=0.210 Sum_probs=58.0
Q ss_pred eEEeec-CCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCC-CC--CC-CCCC-CCCC--CCCCCcceeeEecCCCEE
Q 008484 441 LSKIAF-NSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIG-NF--DP-VKYP-ANYN--LVDPIERNTAAVPTGGWT 512 (564)
Q Consensus 441 ~~~~~~-g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g-~~--~~-~~~~-~~~~--~~~p~~rDTv~vp~~g~~ 512 (564)
-+.++. |+.|.++|.|.+.. |--.=||.|-+...+.- .. +. ...+ .+|= -...+...|..|.+|...
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 366765 99999999997622 11111455544432100 00 00 0000 0110 112345677789999999
Q ss_pred EEEEEec---CceeeEEEeechhchhcccEEEEEEe
Q 008484 513 AIRFRAD---NPGVWFMHCHLELHTGWGLKTAFAVE 545 (564)
Q Consensus 513 ~irf~ad---npG~wl~HCHil~H~d~GM~~~~~V~ 545 (564)
.|.|.+. .+|.|-|-|- -|. ||-+.+.|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999987 8999999999 888 999999873
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=87.03 E-value=4.7 Score=33.24 Aligned_cols=71 Identities=14% Similarity=0.274 Sum_probs=51.0
Q ss_pred cCc--EEEEEEEecCCCCeEEEEEc-CceeEEE--eeCCCccc--------ceEecEEEECCCceEEEEEEeCC--CCce
Q 008484 222 SGK--TYLLRIINAALNDELFFAIA-GHNFTVV--EVDAVYTK--------PFTTEAILIAPGQTTNVLVQANQ--KPGR 286 (564)
Q Consensus 222 ~G~--~~rlriiN~~~~~~~~~~l~-gh~~~vi--a~DG~~~~--------p~~~d~v~l~pg~r~dv~v~~~~--~pg~ 286 (564)
.|+ ...|.+.|.+ .....+.+. |+.+.++ ..+|..+- .+......|.||+...+-...++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s-~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQS-ERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECS-SSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCC-CCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 444 4568889998 555567765 6655544 44576541 34567899999999999999995 4799
Q ss_pred eEEEEee
Q 008484 287 YFMAARP 293 (564)
Q Consensus 287 y~l~~~~ 293 (564)
|.+++.-
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=78.37 E-value=13 Score=33.71 Aligned_cols=62 Identities=15% Similarity=0.176 Sum_probs=47.6
Q ss_pred eeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCCCCceeEEEEeecC
Q 008484 216 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFN 295 (564)
Q Consensus 216 ~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~ 295 (564)
..+.+..|+.+||+|.+.. -.|+|.|.....++ ..-||..-.+.+.+++ ||.|...|.-+.
T Consensus 41 n~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK~----------------daiPGr~n~l~~~~~~-pG~y~g~CsE~C 101 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQI----------------YAMAGMQTRLHLIANE-PGTYDGICAEIC 101 (205)
T ss_dssp SEEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEECCSS-SEEEEEEECSCC
T ss_pred ceEEEeCCCEEEEEEecCC--ceeeEEecccCcEE----------------EecCCceEEEEEEeCC-CeEEEEEccccc
Confidence 4689999999999999864 56677776554333 4457888888888888 799999998654
Q ss_pred C
Q 008484 296 D 296 (564)
Q Consensus 296 ~ 296 (564)
.
T Consensus 102 G 102 (205)
T 1cyx_A 102 G 102 (205)
T ss_dssp S
T ss_pred c
Confidence 3
No 141
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=70.96 E-value=34 Score=28.05 Aligned_cols=74 Identities=9% Similarity=0.157 Sum_probs=45.9
Q ss_pred eEEEECCcCCCCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCC---ccccccCCCCeEEEEEEeCC--C
Q 008484 52 PIVTVNGRFPGPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAY---ITQCPIKTGNSYTYDFNVTG--Q 126 (564)
Q Consensus 52 ~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~---~~~~~i~PG~~~~y~~~~~~--~ 126 (564)
.+...|-+--.=+|+...|.+..+.|.+.... ..| .|+||-.. .....|+||++.+|+...++ .
T Consensus 23 ~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~ 91 (120)
T 3isy_A 23 NMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPE 91 (120)
T ss_dssp EEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCC
T ss_pred EEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCC
Confidence 33344433322377777788777777775321 111 34666433 33467999999999999852 5
Q ss_pred CcceeEecch
Q 008484 127 RGTLWWHAHI 136 (564)
Q Consensus 127 ~Gt~wYH~h~ 136 (564)
+|+|..+.-.
T Consensus 92 pG~Ytl~a~l 101 (120)
T 3isy_A 92 PGTYEVKVTF 101 (120)
T ss_dssp SEEEEEEEEE
T ss_pred CccEEEEEEE
Confidence 8999776543
No 142
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=66.25 E-value=20 Score=33.90 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=47.6
Q ss_pred eeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCCCCceeEEEEeecC
Q 008484 216 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFN 295 (564)
Q Consensus 216 ~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~ 295 (564)
..+.++.|+.+|+++.+. .-.|+|.+.....++ ..-||..-.+.+.+++ ||.|...|.-+.
T Consensus 171 n~l~lP~g~~v~~~~tS~--DViHsf~ip~l~~k~----------------da~PG~~n~~~~~~~~-~G~y~g~Cse~C 231 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA--DVIHSWTVPAFGVKQ----------------DAVPGRLAQLWFRAER-EGIFFGQCSELC 231 (262)
T ss_dssp SCEEEETTSEEEEEEEES--SSCEEEEEGGGTEEE----------------EECBTCCEEEEEECCS-CEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEEC--cccceeeecccCceE----------------EecCCceeEEEEecCC-cEEEEEEChHhc
Confidence 468999999999999976 456777776554433 3457888888888888 799999998654
Q ss_pred C
Q 008484 296 D 296 (564)
Q Consensus 296 ~ 296 (564)
.
T Consensus 232 G 232 (262)
T 2gsm_B 232 G 232 (262)
T ss_dssp S
T ss_pred c
Confidence 3
No 143
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=64.53 E-value=26 Score=33.75 Aligned_cols=63 Identities=17% Similarity=0.257 Sum_probs=48.6
Q ss_pred eeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCCCCceeEEEEeec
Q 008484 215 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 215 ~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
...+.++.|+.+|+++.+.. -.|+|.+.....++ ..-||..-.+.+.+++ ||.|...|..+
T Consensus 188 dN~lvlP~g~~V~~~ltS~D--ViHsf~iP~lg~k~----------------daiPG~~n~~~~~~~~-~G~y~g~CsE~ 248 (298)
T 3hb3_B 188 DNPVVVPVGKKVLVQVTATD--VIHAWTIPAFAVKQ----------------DAVPGRIAQLWFSVDQ-EGVYFGQCSEL 248 (298)
T ss_dssp SSCEEEESSSEEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEEECSS-SEEEEECCCSC
T ss_pred cceEEEEcCCEEEEEEEeCC--ccceeeEcccCceE----------------EecCCceEEEEEEeCC-CEEEEEEcccc
Confidence 35789999999999999854 66777776554433 3457888889998888 79999999865
Q ss_pred CC
Q 008484 295 ND 296 (564)
Q Consensus 295 ~~ 296 (564)
..
T Consensus 249 CG 250 (298)
T 3hb3_B 249 CG 250 (298)
T ss_dssp CS
T ss_pred cC
Confidence 43
No 144
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=55.94 E-value=17 Score=32.86 Aligned_cols=73 Identities=15% Similarity=0.037 Sum_probs=51.9
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecch-hhh-h
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI-FWL-R 140 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~-~~~-~ 140 (564)
..|.+..|+.|++.|++.. .| |+..++.. | .+.-+-||..-...|.+ +++|+|+..|.. -+. .
T Consensus 41 n~l~lP~g~~V~~~lTS~D----Vi--HSF~IP~l----g----vK~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS----VM--HSFFIPRL----G----SQIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEESS----SC--EEEEEGGG----T----EEEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecCC----ce--eeEEeccc----C----cEEEecCCceEEEEEEe-CCCeEEEEEcccccccch
Confidence 4799999999999999873 23 33333211 1 12345789999999987 889999999875 222 2
Q ss_pred cceeeeEEEe
Q 008484 141 ATVYGAIVIM 150 (564)
Q Consensus 141 ~Gl~G~iiV~ 150 (564)
+.|.+.++|.
T Consensus 106 s~M~~~v~vv 115 (205)
T 1cyx_A 106 SGMKFKAIAT 115 (205)
T ss_dssp TTCCEEEEEE
T ss_pred hhceEEEEEE
Confidence 6788888877
No 145
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=50.84 E-value=39 Score=31.12 Aligned_cols=63 Identities=11% Similarity=0.169 Sum_probs=47.0
Q ss_pred eeeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCCCCceeEEEEeec
Q 008484 215 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPF 294 (564)
Q Consensus 215 ~~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~ 294 (564)
...+.+..|+.+|+.+..+ .-.|+|.+.....++ ..-||..-.+.+.+++ ||.|...|.-+
T Consensus 139 dn~lvlP~~~~Vr~~vtS~--DViHsf~vP~lg~K~----------------DaiPGr~n~~~~~~~~-~G~y~g~Cse~ 199 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSE--DVLHSWAVPSLGLKT----------------DAIPGRLNQTTLMSSR-PGLYYGQCSEI 199 (227)
T ss_dssp SSCEEEETTSCEEEEEEES--SSCEEEEEGGGTEEE----------------EECTTCCEEEEECCSS-CEEEEECCCSC
T ss_pred CceEEEecCCEEEEEEEeC--cccceeeecccCcEE----------------EecCCceEEEEEecCC-cEEEEEEehhh
Confidence 3578999999999999875 456777776544333 3456777788888888 79999999865
Q ss_pred CC
Q 008484 295 ND 296 (564)
Q Consensus 295 ~~ 296 (564)
..
T Consensus 200 CG 201 (227)
T 1v54_B 200 CG 201 (227)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 146
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=48.11 E-value=9.6 Score=30.80 Aligned_cols=69 Identities=19% Similarity=0.141 Sum_probs=0.0
Q ss_pred EeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCcccc---------ccCCCCeEEEEEEeCCCCcceeEecch
Q 008484 66 YVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQC---------PIKTGNSYTYDFNVTGQRGTLWWHAHI 136 (564)
Q Consensus 66 ~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~---------~i~PG~~~~y~~~~~~~~Gt~wYH~h~ 136 (564)
+++.||.|+.+..+. .+.|..+++. ++..-.+-...+++ ..+|++||.|-.
T Consensus 29 ~F~vGD~LvF~y~~~-------------------~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L-~~~G~~yFic~~ 88 (109)
T 1ws8_A 29 KFHVGDSLLFNYNNK-------------------FHNVLQVDQEQFKSCNSSSPAASYTSGADSIPL-KRPGTFYFLCGI 88 (109)
T ss_dssp CBCTTCEEEEECCTT-------------------TCCEEEECHHHHHHTCCSSCSEEECSSEEEEEC-CSSEEEEEECCS
T ss_pred cCcCCCEEEEeecCC-------------------CceEEEEChHHCCcccCCCcccccCCCCEEEEE-CCCcCEEEECCC
Q ss_pred hhhh-cceeeeEEEeCCCC
Q 008484 137 FWLR-ATVYGAIVIMPKPG 154 (564)
Q Consensus 137 ~~~~-~Gl~G~iiV~~~~~ 154 (564)
.++= .||...|.|.+...
T Consensus 89 ~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 89 PGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp TTTTTTTCEEEEEECC---
T ss_pred CCcccCCCEEEEEEcCCCC
No 147
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=45.67 E-value=59 Score=30.62 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=51.6
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecch--hhhh
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI--FWLR 140 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~--~~~~ 140 (564)
..|.+..|+.|++.+++.. .| ||..++.. | + +.-+-||..-...|.+ +++|+|+..|.. +...
T Consensus 171 n~l~lP~g~~v~~~~tS~D----Vi--Hsf~ip~l----~---~-k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD----VI--HSWTVPAF----G---V-KQDAVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEESS----SC--EEEEEGGG----T---E-EEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEECc----cc--ceeeeccc----C---c-eEEecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 4699999999999999873 23 23333211 1 1 1235689888888987 899999999874 2222
Q ss_pred cceeeeEEEeCC
Q 008484 141 ATVYGAIVIMPK 152 (564)
Q Consensus 141 ~Gl~G~iiV~~~ 152 (564)
+.|.+.+.|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 567777777654
No 148
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=45.57 E-value=57 Score=26.39 Aligned_cols=47 Identities=23% Similarity=0.422 Sum_probs=30.7
Q ss_pred EEEEEEEecCCCC-eEEEEEcCc-eeEEEeeCCCcccceEecEEEECCCceEEEEEEeC
Q 008484 225 TYLLRIINAALND-ELFFAIAGH-NFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQAN 281 (564)
Q Consensus 225 ~~rlriiN~~~~~-~~~~~l~gh-~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~ 281 (564)
.|+|+|+|.+... .+.+.+.|. .++++ | + ..+.|.||+..++-|...
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v~ 82 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSLG 82 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEEE
Confidence 7899999999555 445666663 23332 2 1 249999999777666543
No 149
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=43.89 E-value=39 Score=32.78 Aligned_cols=62 Identities=15% Similarity=0.213 Sum_probs=46.7
Q ss_pred eeEEEecCcEEEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCCCCceeEEEEeecC
Q 008484 216 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFN 295 (564)
Q Consensus 216 ~~l~~~~G~~~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~~~~ 295 (564)
..+.+..|+.+||++... .-.|+|.+.....++ ..-||..-.+.+.+++ ||.|...|..+.
T Consensus 151 n~l~lP~g~~V~~~lTS~--DViHsf~IP~lg~k~----------------DaiPGr~n~~~~~~~~-~G~y~g~CsE~C 211 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN--SVMNSFFIPRLGSQI----------------YAMAGMQTRLHLIANE-PGTYDGISASYS 211 (315)
T ss_dssp SBCCCCSSSEEEEEECBS--SSCEEEEEGGGTEEE----------------EECBTSCEEEEEECCS-CBCCEEBCCSCC
T ss_pred ceEEEeCCCEEEEEEEeC--CccceeeecccCcEE----------------eecCCcceeeEEecCC-CeEEEEeccccc
Confidence 467899999999999855 456777776544333 4557888888898888 799999998654
Q ss_pred C
Q 008484 296 D 296 (564)
Q Consensus 296 ~ 296 (564)
.
T Consensus 212 G 212 (315)
T 1fft_B 212 G 212 (315)
T ss_dssp S
T ss_pred h
Confidence 3
No 150
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=41.99 E-value=81 Score=30.26 Aligned_cols=76 Identities=12% Similarity=0.180 Sum_probs=53.6
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCceEEEeecCCCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEEEec
Q 008484 440 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 519 (564)
Q Consensus 440 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 519 (564)
+-+.++.|+.|++.+.+. +..|.|.+=.... -+.+-||-...+.|.++
T Consensus 189 N~lvlP~g~~V~~~ltS~----DViHsf~iP~lg~----------------------------k~daiPG~~n~~~~~~~ 236 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT----DVIHAWTIPAFAV----------------------------KQDAVPGRIAQLWFSVD 236 (298)
T ss_dssp SCEEEESSSEEEEEEEES----SSCEEEEEGGGTE----------------------------EEEECTTCCEEEEEECS
T ss_pred ceEEEEcCCEEEEEEEeC----CccceeeEcccCc----------------------------eEEecCCceEEEEEEeC
Confidence 346789999999999984 4566655532211 12345677788899999
Q ss_pred CceeeEEEeechh-chhcccEEEEEEecC
Q 008484 520 NPGVWFMHCHLEL-HTGWGLKTAFAVEDG 547 (564)
Q Consensus 520 npG~wl~HCHil~-H~d~GM~~~~~V~~~ 547 (564)
.||.|...|.-.- --+..|-..++|.+.
T Consensus 237 ~~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 237 QEGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp SSEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred CCEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 9999999998554 345667777777653
No 151
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=41.91 E-value=65 Score=25.05 Aligned_cols=68 Identities=12% Similarity=0.113 Sum_probs=38.6
Q ss_pred EEecCcEEEEEEEecCCCCeEEEEEcCc--eeEEEeeCCCcccceEecEEEECCCceEEEEEEeCCCC--ceeEEEEe
Q 008484 219 EVESGKTYLLRIINAALNDELFFAIAGH--NFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKP--GRYFMAAR 292 (564)
Q Consensus 219 ~~~~G~~~rlriiN~~~~~~~~~~l~gh--~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~p--g~y~l~~~ 292 (564)
.-++||++++|++-...... . ..+- .+++...+|+.+. .-.........++..+..++.+ |.|.|++.
T Consensus 12 iYrPGetV~~~~~~~~~~~~-p--~~~~~~~v~l~dp~g~~v~---~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~ 83 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDENFH-P--LNELIPLVYIQDPKGNRIA---QWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQ 83 (102)
T ss_dssp EECTTCEEEEEEEEECGGGC-B--CCCEEEEEEEECTTSCEEE---EEEEEECBTTEEEEEEECCSSCCCEEEEEEEE
T ss_pred ccCCCCEEEEEEEEECCCCc-C--CCCCceEEEEECCCCCEEE---EEEeecCCCCEEEEEEECCCCCCCeeEEEEEE
Confidence 46899999999875542211 0 1111 3445555565321 1122223456677777776643 99999986
No 152
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=41.26 E-value=34 Score=32.19 Aligned_cols=46 Identities=11% Similarity=0.118 Sum_probs=28.5
Q ss_pred EEEEEEEEEEEeecCCceeeEEEECCc---------CC----CCeEEeecCCEEEEEEEeC
Q 008484 33 KKYQFDVQVKNVSRLCHAKPIVTVNGR---------FP----GPTIYVREGDRVLVNVTNH 80 (564)
Q Consensus 33 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~---------~p----gP~i~v~~Gd~v~v~l~N~ 80 (564)
++..+.+++..-. -...++|.-+|. .| -|..|+++|+.-.||+...
T Consensus 44 k~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 44 REVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp SEEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred cEEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 4555666554222 234566776652 11 2889999999888888654
No 153
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=38.05 E-value=67 Score=31.48 Aligned_cols=16 Identities=25% Similarity=0.519 Sum_probs=14.5
Q ss_pred ccccCCCCeEEEEEEe
Q 008484 108 QCPIKTGNSYTYDFNV 123 (564)
Q Consensus 108 ~~~i~PG~~~~y~~~~ 123 (564)
..||+|||+.+.+.++
T Consensus 319 ~~pI~PGETr~~~v~a 334 (382)
T 1yew_A 319 NSPLAPGETRTVDVTA 334 (382)
T ss_dssp CSCBCTTCEEEEEEEE
T ss_pred CCCcCCCceeEEEEEe
Confidence 4789999999999988
No 154
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=35.69 E-value=38 Score=26.85 Aligned_cols=51 Identities=14% Similarity=0.151 Sum_probs=33.8
Q ss_pred EEEEEEEeCCCCCc---eeeeCC--CCCCCCCCCCCCCCccccccCCCCeEEEEEEe-CCCCcce
Q 008484 72 RVLVNVTNHAQYNM---SIHWHG--LKQYRNGWADGPAYITQCPIKTGNSYTYDFNV-TGQRGTL 130 (564)
Q Consensus 72 ~v~v~l~N~l~~~~---~iH~HG--~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~-~~~~Gt~ 130 (564)
.+.|.|+|-|+.+. .++..| +... . -.....|.||++..+++.. +..+|..
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~~~-~-------~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQRP-K-------ILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTEEE-E-------EEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCCcc-e-------EEEcCcCCCCCEEEEEEEEecCcccce
Confidence 67899999998663 244444 3322 1 1112358999999999987 6667764
No 155
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=34.97 E-value=43 Score=28.19 Aligned_cols=74 Identities=9% Similarity=-0.037 Sum_probs=0.0
Q ss_pred EeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCc----------cccccCCCCeEEEEEEeCCCCcceeEecc
Q 008484 66 YVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYI----------TQCPIKTGNSYTYDFNVTGQRGTLWWHAH 135 (564)
Q Consensus 66 ~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~----------~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h 135 (564)
+++.||.|+.+..+. .+.|..+ ...++....+-...|++...+|++||.|-
T Consensus 31 ~F~vGD~LvF~y~~~-------------------~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~~~~G~~YFicg 91 (138)
T 1jer_A 31 TFRVGDSLQFNFPAN-------------------AHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLDELGMHYFVCT 91 (138)
T ss_dssp CEETTCEEEECCCTT-------------------TCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEECCSSEEEEEECC
T ss_pred cCcCCCEEEEeecCC-------------------CceEEEeCchhhcCccCCCCccccccCCCeEEEeccCCcCEEEEcC
Q ss_pred hhhhh-cceeeeEEEeCCCCCCCC
Q 008484 136 IFWLR-ATVYGAIVIMPKPGSPFP 158 (564)
Q Consensus 136 ~~~~~-~Gl~G~iiV~~~~~~~~~ 158 (564)
..++= .||...|.|........+
T Consensus 92 ~~gHC~~GmKl~I~V~~~~~~~~~ 115 (138)
T 1jer_A 92 VGTHCSNGQKLSINVVAANATVSM 115 (138)
T ss_dssp STTTGGGTCEEEEEEECCC-----
T ss_pred CCCccccCCEEEEEEcCCCCCCCC
No 156
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=34.71 E-value=71 Score=29.35 Aligned_cols=75 Identities=8% Similarity=0.028 Sum_probs=49.7
Q ss_pred CeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCCccccccCCCCeEEEEEEeCCCCcceeEecch--hhhh
Q 008484 63 PTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI--FWLR 140 (564)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~~~~~~~~Gt~wYH~h~--~~~~ 140 (564)
..+.+..|..||+.++... .|| +..++.- | + +.-.-||..-...|.+ +++|+|+..|.. +...
T Consensus 140 n~lvlP~~~~Vr~~vtS~D----ViH--sf~vP~l----g---~-K~DaiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED----VLH--SWAVPSL----G---L-KTDAIPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEESS----SCE--EEEEGGG----T---E-EEEECTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeCc----ccc--eeeeccc----C---c-EEEecCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 6899999999999999863 233 3222211 1 0 1234678888888887 889999999874 2222
Q ss_pred cceeeeEEEeCC
Q 008484 141 ATVYGAIVIMPK 152 (564)
Q Consensus 141 ~Gl~G~iiV~~~ 152 (564)
+.|.+.+.|.++
T Consensus 205 s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 SFMPIVLELVPL 216 (227)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 557666666543
No 157
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=32.66 E-value=90 Score=25.52 Aligned_cols=59 Identities=17% Similarity=0.263 Sum_probs=39.9
Q ss_pred eEEeecC-CEEEEEEEeCCCCCce--eeeCCCCCCCCCCCC-----C----CCCccccccCCCCeEEEEEE
Q 008484 64 TIYVREG-DRVLVNVTNHAQYNMS--IHWHGLKQYRNGWAD-----G----PAYITQCPIKTGNSYTYDFN 122 (564)
Q Consensus 64 ~i~v~~G-d~v~v~l~N~l~~~~~--iH~HG~~~~~~~~~D-----G----v~~~~~~~i~PG~~~~y~~~ 122 (564)
.|++++| .++.|.|.|..+.|.- -|+|=....+.=.-| | .|.-|..-..||++.+-+.-
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5788888 6899999999988865 577776665431122 1 33334456788888776664
No 158
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=32.66 E-value=90 Score=25.52 Aligned_cols=59 Identities=17% Similarity=0.263 Sum_probs=39.9
Q ss_pred eEEeecC-CEEEEEEEeCCCCCce--eeeCCCCCCCCCCCC-----C----CCCccccccCCCCeEEEEEE
Q 008484 64 TIYVREG-DRVLVNVTNHAQYNMS--IHWHGLKQYRNGWAD-----G----PAYITQCPIKTGNSYTYDFN 122 (564)
Q Consensus 64 ~i~v~~G-d~v~v~l~N~l~~~~~--iH~HG~~~~~~~~~D-----G----v~~~~~~~i~PG~~~~y~~~ 122 (564)
.|++++| .++.|.|.|..+.|.- -|+|=....+.=.-| | .|.-|..-..||++.+-+.-
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5788888 6899999999988865 577776665431122 1 33334456788888776664
No 159
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=31.47 E-value=65 Score=26.61 Aligned_cols=69 Identities=26% Similarity=0.348 Sum_probs=37.4
Q ss_pred EEECCcCCCCeEEeecCCEEEEEEE---eCCCCCce--ee--eCCCCCC-CCCCCCCCCCccccccCCCCeEEEEEEe
Q 008484 54 VTVNGRFPGPTIYVREGDRVLVNVT---NHAQYNMS--IH--WHGLKQY-RNGWADGPAYITQCPIKTGNSYTYDFNV 123 (564)
Q Consensus 54 ~~~Ng~~pgP~i~v~~Gd~v~v~l~---N~l~~~~~--iH--~HG~~~~-~~~~~DGv~~~~~~~i~PG~~~~y~~~~ 123 (564)
..++|- +.+.=.++.|..+.+.+. |....... +| ..|+..+ +....|+=..-..|||.+|+.++|.+.+
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEe
Confidence 345552 234456778887777766 22211111 22 2344432 1111344211246999999999999877
No 160
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=27.77 E-value=51 Score=26.76 Aligned_cols=39 Identities=8% Similarity=-0.072 Sum_probs=0.0
Q ss_pred EEEEeCCCCcceeEecchhhhh-cceeeeE-EEeCCCCCCCC
Q 008484 119 YDFNVTGQRGTLWWHAHIFWLR-ATVYGAI-VIMPKPGSPFP 158 (564)
Q Consensus 119 y~~~~~~~~Gt~wYH~h~~~~~-~Gl~G~i-iV~~~~~~~~~ 158 (564)
..+++ ..+|++||.|-...+= .||..+| .|.+......+
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~~~~~~ 112 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGGAGGGA 112 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC-------
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCCCCCCC
No 161
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=27.48 E-value=90 Score=25.66 Aligned_cols=69 Identities=17% Similarity=0.310 Sum_probs=37.8
Q ss_pred EEECCcCCCCeEEeecCCEEEEEEEeCCC---C--Cceee--eCCCCCCC-CCCCCCCCCccccccCCCCeEEEEEEe
Q 008484 54 VTVNGRFPGPTIYVREGDRVLVNVTNHAQ---Y--NMSIH--WHGLKQYR-NGWADGPAYITQCPIKTGNSYTYDFNV 123 (564)
Q Consensus 54 ~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~---~--~~~iH--~HG~~~~~-~~~~DGv~~~~~~~i~PG~~~~y~~~~ 123 (564)
..++|--+.+.=.++.|..+.+.+.=..+ . .+.+| ..|+..+- ....|+=-+ ..|||.+|+.++|.+..
T Consensus 16 V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 16 VMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp EEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred EEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 34554312345567888877777762221 1 12233 24444432 111343212 46999999999999776
No 162
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=27.45 E-value=2.5e+02 Score=23.13 Aligned_cols=21 Identities=24% Similarity=0.415 Sum_probs=18.0
Q ss_pred CCCeEEeecCCEEEEEEEeCC
Q 008484 61 PGPTIYVREGDRVLVNVTNHA 81 (564)
Q Consensus 61 pgP~i~v~~Gd~v~v~l~N~l 81 (564)
-|-+|.++.||++.|.|.-+-
T Consensus 31 n~~~I~v~~Ge~~~I~L~~NP 51 (131)
T 2h7w_A 31 NGATLTVAVGELVEIQLPSNP 51 (131)
T ss_dssp TTCEEEECTTCEEEEEEEECG
T ss_pred CCCEEEEeCCCEEEEEeCCCC
Confidence 356899999999999999764
No 163
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=25.76 E-value=30 Score=28.70 Aligned_cols=19 Identities=26% Similarity=0.343 Sum_probs=16.6
Q ss_pred eEEEecCcEEEEEEEecCC
Q 008484 217 AMEVESGKTYLLRIINAAL 235 (564)
Q Consensus 217 ~l~~~~G~~~rlriiN~~~ 235 (564)
.++|+.||+|||.+.|-+.
T Consensus 72 ~InV~~GETVrF~v~nkt~ 90 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIV 90 (131)
T ss_dssp EEEEETTCEEEEEETTEEE
T ss_pred EEEecCCCEEEEEeCCcEE
Confidence 4899999999999988763
No 164
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=25.41 E-value=2.8e+02 Score=22.68 Aligned_cols=66 Identities=15% Similarity=0.140 Sum_probs=43.5
Q ss_pred EEecCcE--EEEEEEecCCCCeEEEEEcCceeEEEeeCCCcccceEecEEEECCCceEEEEEEeCC-CCceeEEEEee
Q 008484 219 EVESGKT--YLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ-KPGRYFMAARP 293 (564)
Q Consensus 219 ~~~~G~~--~rlriiN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~-~pg~y~l~~~~ 293 (564)
.+++|+. ++..+.|.|....-.+.+ .++ .||..+. ..++.|++|+...|.|.... .+|.|.|.+.-
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~ly-vng~~v~---t~~v~La~G~s~tv~f~~~~~~~G~~~v~AvV 96 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RVY-INGTLYK---NWTVSLGPKEEKVLTFNWTPTQEGMYRINATV 96 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EEE-ETTEEEE---EEEEEECTTCEEEEEEEECCSSCEEEEEEEEE
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EEE-ECCEEEe---eEEeccCCCCeEEEEEEEEcCCCcEEEEEEEE
Confidence 6778885 467788999766544432 222 2665432 22457999999888887543 35899888764
No 165
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=25.18 E-value=1.3e+02 Score=29.78 Aligned_cols=17 Identities=18% Similarity=0.159 Sum_probs=14.6
Q ss_pred cccccCCCCeEEEEEEe
Q 008484 107 TQCPIKTGNSYTYDFNV 123 (564)
Q Consensus 107 ~~~~i~PG~~~~y~~~~ 123 (564)
+..||+|||+.+.+.++
T Consensus 350 s~~pI~PGETrt~~V~a 366 (419)
T 3rfr_A 350 NDDVIAPGESKEIVVKI 366 (419)
T ss_dssp CCCCBCTTCEEEEEEEE
T ss_pred CCCCcCCCcceEEEEEe
Confidence 33499999999999988
No 166
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=24.71 E-value=2.7e+02 Score=22.29 Aligned_cols=68 Identities=9% Similarity=-0.001 Sum_probs=36.1
Q ss_pred CCeEEeecCCEEEEEEEeCCCCCceeeeCCCCCCCCCCCCCCCC--------ccccccCCCCeEEEEEEeCCCCcce
Q 008484 62 GPTIYVREGDRVLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAY--------ITQCPIKTGNSYTYDFNVTGQRGTL 130 (564)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~--------~~~~~i~PG~~~~y~~~~~~~~Gt~ 130 (564)
|-+|.++.||++.|.|.-+-.....=......-...--.+|... .....+..|....+.|++ .++|+.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~~ 89 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGHH 89 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSSE
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCceE
Confidence 45899999999999999765433322222111000000111100 000124557788888888 677763
No 167
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=22.46 E-value=1.7e+02 Score=27.02 Aligned_cols=14 Identities=14% Similarity=0.482 Sum_probs=11.5
Q ss_pred ecEEEECCCceEEE
Q 008484 263 TEAILIAPGQTTNV 276 (564)
Q Consensus 263 ~d~v~l~pg~r~dv 276 (564)
...|.|.|||.+.+
T Consensus 171 G~~i~L~PGESiTl 184 (246)
T 3kmh_A 171 GSQLRLSPGESICL 184 (246)
T ss_dssp TCEEEECTTCEEEE
T ss_pred CCEEEECCCCeEec
Confidence 36789999999875
No 168
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=21.79 E-value=3.2e+02 Score=22.08 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=16.5
Q ss_pred CCeEEeecCCEEEEEEEeCCC
Q 008484 62 GPTIYVREGDRVLVNVTNHAQ 82 (564)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~ 82 (564)
+-+|.++.||++.|.|.-+-.
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPt 32 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPT 32 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCC
Confidence 456999999999999986543
No 169
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=21.42 E-value=35 Score=28.28 Aligned_cols=17 Identities=18% Similarity=0.302 Sum_probs=16.1
Q ss_pred eEEeecCCEEEEEEEeC
Q 008484 64 TIYVREGDRVLVNVTNH 80 (564)
Q Consensus 64 ~i~v~~Gd~v~v~l~N~ 80 (564)
-|.|+.|++|++.+.|+
T Consensus 72 ~InV~~GETVrF~v~nk 88 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEK 88 (131)
T ss_dssp EEEEETTCEEEEEETTE
T ss_pred EEEecCCCEEEEEeCCc
Confidence 59999999999999998
No 170
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=20.58 E-value=37 Score=26.67 Aligned_cols=24 Identities=25% Similarity=0.271 Sum_probs=20.6
Q ss_pred eEEEECCcCCCCeEEeecCCEEEE
Q 008484 52 PIVTVNGRFPGPTIYVREGDRVLV 75 (564)
Q Consensus 52 ~~~~~Ng~~pgP~i~v~~Gd~v~v 75 (564)
..+.+||++-.+.-.+++||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 568999998767888999999986
No 171
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=20.53 E-value=3.6e+02 Score=22.18 Aligned_cols=73 Identities=11% Similarity=0.157 Sum_probs=42.1
Q ss_pred eEEEecCcEEEEEEE-ecCCCCeEEEEEcCce-eEEEeeCCCcccceEecEEEECCCceEEEEEEeCCCCceeEEEEe
Q 008484 217 AMEVESGKTYLLRII-NAALNDELFFAIAGHN-FTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 292 (564)
Q Consensus 217 ~l~~~~G~~~rlrii-N~~~~~~~~~~l~gh~-~~via~DG~~~~p~~~d~v~l~pg~r~dv~v~~~~~pg~y~l~~~ 292 (564)
.++++.|+...++|- |.+.-....+....-. +..+. |-.+ .|...+.-.++.|....+.|++.+ +|...|...
T Consensus 36 tI~v~~Ge~~~I~L~~NPTTGY~W~~~~~~~~vl~~l~-~~~y-~~~~~~~~~vGagG~~~w~f~A~~-~G~~~i~~~ 110 (132)
T 2wgn_B 36 PLKLTQGQELVLTLPSNPTTGFRWELRNPAASVLKRLG-PEVY-SNSEEDSGLVGSGGESTWRFRVAA-SGDDRLELV 110 (132)
T ss_dssp CEEECTTCEEEEEECCCTTTSCEEEEEECCTTTEEECC-SCCS-CSSCSSCCCSSSSCCEEEEEEECS-CEEEEEEEE
T ss_pred EEEEcCCCEEEEEeCCCCCCCeEEEEecCCCceEEecc-ccee-cCCCCccCCcCCCceEEEEEEEcC-CceEEEEEE
Confidence 588999998877775 3443333333332221 22111 1111 121123446778888889999998 698887765
No 172
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=20.49 E-value=3e+02 Score=26.84 Aligned_cols=68 Identities=19% Similarity=0.209 Sum_probs=44.0
Q ss_pred cEEEEEEEecCCCCeEEE----EEcC---ceeEEEeeCCCcc----------cceEecEEEECCCceEEEEEEeCC----
Q 008484 224 KTYLLRIINAALNDELFF----AIAG---HNFTVVEVDAVYT----------KPFTTEAILIAPGQTTNVLVQANQ---- 282 (564)
Q Consensus 224 ~~~rlriiN~~~~~~~~~----~l~g---h~~~via~DG~~~----------~p~~~d~v~l~pg~r~dv~v~~~~---- 282 (564)
-.+..-|.|.|... +.| -+++ ..|.| ..||..+ .|..-+-+.|.|||.+++.|+...
T Consensus 38 ~~vk~tvtN~g~~~-~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydL 115 (343)
T 2x3c_A 38 VRVNLTLTNTGDKP-IRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDM 115 (343)
T ss_dssp CEEEEEEEECSSSC-EEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTC
T ss_pred eEEEEEEEeCCCCc-eEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhcccc
Confidence 46677777777543 322 1222 34555 4677554 122246799999999999999875
Q ss_pred -CCceeEEEEee
Q 008484 283 -KPGRYFMAARP 293 (564)
Q Consensus 283 -~pg~y~l~~~~ 293 (564)
.+|.|.++...
T Consensus 116 s~gG~y~v~~~g 127 (343)
T 2x3c_A 116 SAQGQYSIRYQL 127 (343)
T ss_dssp CSCEEEEEEEC-
T ss_pred CCCceEEEEEee
Confidence 35899998864
No 173
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=20.09 E-value=44 Score=24.44 Aligned_cols=24 Identities=13% Similarity=0.301 Sum_probs=20.2
Q ss_pred eEEEECCcC-CCCeEEeecCCEEEE
Q 008484 52 PIVTVNGRF-PGPTIYVREGDRVLV 75 (564)
Q Consensus 52 ~~~~~Ng~~-pgP~i~v~~Gd~v~v 75 (564)
-.+.+||++ ++..-.++.||+|.|
T Consensus 43 ~~vavN~~~v~~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 43 CAIALNDHLIDNLNTPLKDGDVISL 67 (74)
T ss_dssp CEEEESSSEECCTTCCCCTTCEEEE
T ss_pred cEEEECCEEcCCCCcCCCCCCEEEE
Confidence 467899998 887778999999876
Done!