Query 008485
Match_columns 564
No_of_seqs 347 out of 1782
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 04:41:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008485.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008485hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xg2_A Pectinesterase 1; prote 100.0 3.1E-95 1.1E-99 752.0 31.5 314 247-564 2-316 (317)
2 1gq8_A Pectinesterase; hydrola 100.0 9.1E-95 3.1E-99 749.2 32.3 314 246-563 5-319 (319)
3 3uw0_A Pectinesterase; right-h 100.0 3E-79 1E-83 642.1 28.2 287 247-554 30-364 (364)
4 2nsp_A Pectinesterase A; micha 100.0 3.4E-79 1.2E-83 638.7 27.9 288 247-554 3-340 (342)
5 3grh_A YBHC, acyl-COA thioeste 100.0 1.1E-74 3.9E-79 610.0 25.0 265 245-519 72-416 (422)
6 1xg2_B Pectinesterase inhibito 99.9 6.2E-28 2.1E-32 223.4 12.2 142 36-189 4-149 (153)
7 1x91_A Invertase/pectin methyl 99.9 7.6E-28 2.6E-32 223.1 11.7 142 36-189 6-149 (153)
8 2cj4_A Invertase inhibitor; pr 99.9 7.8E-27 2.7E-31 215.8 11.2 140 36-190 5-149 (150)
9 1ru4_A Pectate lyase, PEL9A; p 99.6 1.3E-14 4.6E-19 154.4 20.6 142 246-403 13-177 (400)
10 1dbg_A Chondroitinase B; beta 99.4 8.7E-13 3E-17 144.0 14.2 147 249-419 25-208 (506)
11 2inu_A Insulin fructotransfera 98.5 6.4E-07 2.2E-11 94.2 12.2 134 281-418 58-227 (410)
12 2pyg_A Poly(beta-D-mannuronate 98.3 1.6E-05 5.5E-10 83.2 16.5 52 259-318 18-78 (377)
13 3eqn_A Glucan 1,3-beta-glucosi 98.0 0.00017 5.8E-09 81.1 18.8 145 260-410 66-234 (758)
14 1bhe_A PEHA, polygalacturonase 97.5 0.0024 8.2E-08 67.1 17.0 110 331-454 152-276 (376)
15 3gq8_A Preneck appendage prote 97.5 0.0044 1.5E-07 68.5 19.4 171 261-451 40-272 (609)
16 1hg8_A Endopolygalacturonase; 97.3 0.0035 1.2E-07 65.3 14.8 203 259-487 7-267 (349)
17 1pxz_A Major pollen allergen J 97.3 0.0053 1.8E-07 63.8 15.9 100 261-383 56-176 (346)
18 2iq7_A Endopolygalacturonase; 97.2 0.0028 9.6E-08 65.7 13.7 201 260-486 8-254 (339)
19 3gqn_A Preneck appendage prote 97.2 0.0089 3.1E-07 67.4 17.9 145 260-417 39-244 (772)
20 3jur_A EXO-poly-alpha-D-galact 97.2 0.0069 2.3E-07 65.2 16.1 142 332-488 192-352 (448)
21 1rmg_A Rgase A, rhamnogalactur 97.1 0.0054 1.9E-07 65.5 14.4 172 260-454 37-247 (422)
22 1h80_A IOTA-carrageenase; hydr 97.0 0.0082 2.8E-07 64.8 14.9 178 260-454 39-272 (464)
23 1ia5_A Polygalacturonase; glyc 97.0 0.0066 2.3E-07 62.9 13.7 201 260-486 12-258 (339)
24 1nhc_A Polygalacturonase I; be 97.0 0.0044 1.5E-07 64.1 12.3 201 260-487 8-254 (336)
25 2uvf_A Exopolygalacturonase; G 96.9 0.014 4.7E-07 65.2 16.5 110 333-454 334-462 (608)
26 1czf_A Polygalacturonase II; b 96.9 0.012 4.1E-07 61.5 15.0 201 260-486 35-279 (362)
27 1qcx_A Pectin lyase B; beta-he 96.9 0.007 2.4E-07 63.2 13.0 69 332-401 125-201 (359)
28 1air_A Pectate lyase C, PELC; 96.8 0.018 6.2E-07 59.9 14.9 136 260-418 26-187 (353)
29 2qy1_A Pectate lyase II; GAG l 96.7 0.0057 2E-07 63.2 10.6 129 261-418 24-173 (330)
30 1idk_A Pectin lyase A; signal, 96.7 0.0078 2.7E-07 62.9 11.0 89 294-400 104-200 (359)
31 1pcl_A Pectate lyase E; lyase 96.4 0.087 3E-06 54.8 16.6 130 300-454 79-228 (355)
32 3vmv_A Pectate lyase; polysacc 96.3 0.042 1.4E-06 56.5 13.8 128 262-417 30-173 (326)
33 3zsc_A Pectate trisaccharide-l 96.0 0.024 8.3E-07 58.6 10.2 85 280-384 47-143 (340)
34 1gq8_A Pectinesterase; hydrola 95.8 0.053 1.8E-06 55.7 11.6 114 330-452 114-242 (319)
35 1xg2_A Pectinesterase 1; prote 95.6 0.057 1.9E-06 55.4 10.8 113 330-452 110-238 (317)
36 1pe9_A Pectate lyase A; parall 95.6 0.038 1.3E-06 57.6 9.4 146 278-453 52-238 (361)
37 1k5c_A Endopolygalacturonase; 95.1 0.11 3.6E-06 53.7 11.1 133 336-486 104-250 (335)
38 1x0c_A Isopullulanase; glycosi 94.9 0.21 7.1E-06 55.0 13.3 108 335-454 290-406 (549)
39 2nsp_A Pectinesterase A; micha 94.9 0.13 4.4E-06 53.2 11.0 115 358-486 88-229 (342)
40 3uw0_A Pectinesterase; right-h 94.9 0.14 4.7E-06 53.5 11.2 112 358-485 114-253 (364)
41 2o04_A Pectate lyase, PL; hexa 94.9 0.1 3.5E-06 55.2 10.3 130 300-454 126-277 (399)
42 3grh_A YBHC, acyl-COA thioeste 94.7 0.18 6.1E-06 53.4 11.5 111 360-486 195-330 (422)
43 1vbl_A Pectate lyase 47; PL 47 94.5 0.15 5E-06 54.2 10.5 130 300-454 131-283 (416)
44 1ogo_X Dextranase; hydrolase, 92.5 1.2 4E-05 49.2 13.6 106 336-454 331-444 (574)
45 2iq7_A Endopolygalacturonase; 91.4 2.1 7.3E-05 43.9 13.4 113 336-454 130-256 (339)
46 1ru4_A Pectate lyase, PEL9A; p 89.8 7.4 0.00025 40.8 16.1 82 332-419 131-230 (400)
47 1nhc_A Polygalacturonase I; be 88.6 5.8 0.0002 40.5 13.9 111 335-454 128-255 (336)
48 1ia5_A Polygalacturonase; glyc 88.2 2.8 9.6E-05 43.0 11.2 114 335-454 133-260 (339)
49 1hg8_A Endopolygalacturonase; 86.6 2.9 9.9E-05 43.1 10.2 112 336-453 134-267 (349)
50 3eqn_A Glucan 1,3-beta-glucosi 86.4 2.4 8.1E-05 47.9 9.9 101 260-376 417-531 (758)
51 2uvf_A Exopolygalacturonase; G 84.9 10 0.00034 42.1 14.1 108 336-453 361-490 (608)
52 2x6w_A Tail spike protein; vir 84.8 3.4 0.00012 45.6 10.0 29 259-292 63-92 (600)
53 1rmg_A Rgase A, rhamnogalactur 83.6 7.2 0.00025 41.2 11.8 19 358-376 199-217 (422)
54 1czf_A Polygalacturonase II; b 83.2 3.6 0.00012 42.6 9.1 114 334-453 153-280 (362)
55 1bhe_A PEHA, polygalacturonase 82.6 15 0.00052 37.9 13.7 110 335-453 180-304 (376)
56 1x0c_A Isopullulanase; glycosi 79.2 18 0.00062 39.5 13.3 77 338-418 318-404 (549)
57 2vbk_A Tailspike-protein; vira 79.0 16 0.00054 38.9 12.0 46 259-311 67-118 (514)
58 3jur_A EXO-poly-alpha-D-galact 76.3 33 0.0011 36.4 14.0 110 334-454 218-352 (448)
59 1dbg_A Chondroitinase B; beta 65.7 32 0.0011 37.1 11.1 94 360-454 88-209 (506)
60 1pxz_A Major pollen allergen J 62.5 10 0.00034 39.1 6.1 65 379-450 150-222 (346)
61 3gqn_A Preneck appendage prote 62.0 68 0.0023 36.3 13.0 20 366-385 234-253 (772)
62 1k5c_A Endopolygalacturonase; 59.9 36 0.0012 34.6 9.7 112 335-453 125-251 (335)
63 1vcl_A Hemolytic lectin CEL-II 48.6 0.93 3.2E-05 48.3 -4.6 93 251-352 295-394 (432)
64 3gq8_A Preneck appendage prote 48.4 44 0.0015 36.9 8.5 13 536-548 446-458 (609)
65 1ogo_X Dextranase; hydrolase, 47.1 1E+02 0.0036 33.7 11.3 80 336-419 354-443 (574)
66 2inu_A Insulin fructotransfera 42.4 94 0.0032 32.6 9.5 22 330-351 161-184 (410)
67 3dxr_B Mitochondrial import in 23.4 3.1E+02 0.011 22.5 7.9 33 93-125 55-87 (95)
68 3cjh_B Mitochondrial import in 22.2 1.3E+02 0.0046 22.6 5.0 31 93-123 33-63 (64)
69 1h80_A IOTA-carrageenase; hydr 21.2 1.4E+02 0.005 31.6 6.7 79 334-418 171-270 (464)
No 1
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=100.00 E-value=3.1e-95 Score=752.03 Aligned_cols=314 Identities=54% Similarity=0.930 Sum_probs=299.7
Q ss_pred cceEEEcCCCCCCcccHHHHHHhCCCCCCCCCceEEEEEcCcEEeeeEEEEecCcceEEeecCCcceEEeccccccCCcc
Q 008485 247 SDIVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGWT 326 (564)
Q Consensus 247 ~~~~~V~~dg~g~f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~Itl~G~g~~~tiI~~~~~~~~g~~ 326 (564)
+++++|++||+|+|+|||+||++||++ +.+|++|+|+||+|+|+|+|++.|++|||+|+|+++|+|+++.+..+|.+
T Consensus 2 ~~~i~V~~dGsg~f~TIq~AI~aap~~---~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~ 78 (317)
T 1xg2_A 2 IANAVVAQDGTGDYQTLAEAVAAAPDK---SKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGST 78 (317)
T ss_dssp CCSEEECTTSCSSBSSHHHHHHHSCSS---CSSCEEEEECSEEEECCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCC
T ss_pred CceEEECCCCCCCcccHHHHHhhcccC---CCceEEEEEcCCEEeeeeecCCCCCcEEEEEcCCCCcEEEecccccCCCc
Confidence 468999999999999999999999998 56789999999999999999999999999999999999999998888999
Q ss_pred cccceeEEEEcCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccccceEeecCcceeeeccEEEeccceeeec
Q 008485 327 TFNSATFAVVAPKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGN 406 (564)
Q Consensus 327 t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~~~~~r~~~~~C~I~G~vDFIfG~ 406 (564)
|++++||.|.+++|+++||||+|++|+.++|||||++.+|+++|+||+|+|||||||++.+||||++|+|+|+||||||+
T Consensus 79 t~~satv~v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~vDFIfG~ 158 (317)
T 1xg2_A 79 TFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGN 158 (317)
T ss_dssp SGGGCSEEECSTTCEEESCEEEECCCGGGCCCCSEEECCTTEEEESCEEECSTTCEEECSSEEEEESCEEEESSSCEEEC
T ss_pred ccceeEEEEECCCEEEEEeEEecccCCccCceEEEEEeCCcEEEEEeEeCccccceeecCccEEEEeeEEEeceeEEcCC
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred ceeEeeeeeeeeeCCCCCCceeEEecCCCCCCCCceEEEEccEEeecCCCCCCCCcceEEeeccccCcCcEEEeccCCCC
Q 008485 407 AAVVLQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRASSDLASGSQTVQTYLGRPWKEYSRTVYMQSFMDS 486 (564)
Q Consensus 407 ~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~s~i~~ 486 (564)
++++||+|+|+++++.+++.++||||||+++.+++||||+||+|++++++.+.....++||||||++|+|+|||+|+|++
T Consensus 159 ~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~~ 238 (317)
T 1xg2_A 159 AAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGG 238 (317)
T ss_dssp CEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSSTTCEEEEESCEECT
T ss_pred ceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEeecccCCCceEEEEecccCC
Confidence 99999999999999877888999999999999999999999999999877554445689999999999999999999999
Q ss_pred ccCCCCCcCCCCCCCCCccEEEEecccCCCCCCCCccccCCccccC-CHHHHcccchhccccCCCCcCCCCCCccCCCC
Q 008485 487 SINPAGWQIWSGDFALSTLYYAEYNNTGPGSNTANRVTWPGYHVTI-NATDAANFTVSNFLLGDDWIPQTGVSYTGALI 564 (564)
Q Consensus 487 ~I~p~GW~~w~~~~~~~t~~f~Ey~n~GpGa~~s~Rv~w~~~~~~l-~~~ea~~ft~~~fi~g~~W~p~~~vp~~~~~~ 564 (564)
+|+|+||.+|++.+++++++|+||+|+|||+++++||+|+++|+ | +++||++|++.+||+|++|+|.+||||++||.
T Consensus 239 ~I~p~GW~~w~~~~~~~t~~~~Ey~n~GpGa~~~~Rv~w~~~~~-l~~~~ea~~~t~~~~i~g~~W~p~~~~~~~~~~~ 316 (317)
T 1xg2_A 239 LINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHV-ITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGLY 316 (317)
T ss_dssp TBCTTCSCCSSTTTTTTTCEEEEESCBSTTCCCTTSCCCTTEEE-ECCHHHHGGGSHHHHSCTHHHHGGGCCCCCCSSC
T ss_pred cccccccccCCCCCCcCceEEEEEcCCCCCCCcccccccccccc-cCCHHHHHHhhHHhhcCCCCCcCCCCcccccccc
Confidence 99999999999988999999999999999999999999999877 5 57999999999999999999999999999984
No 2
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=100.00 E-value=9.1e-95 Score=749.18 Aligned_cols=314 Identities=56% Similarity=0.919 Sum_probs=299.6
Q ss_pred ccceEEEcCCCCCCcccHHHHHHhCCCCCCCCCceEEEEEcCcEEeeeEEEEecCcceEEeecCCcceEEeccccccCCc
Q 008485 246 VSDIVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGW 325 (564)
Q Consensus 246 ~~~~~~V~~dg~g~f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~Itl~G~g~~~tiI~~~~~~~~g~ 325 (564)
++++++|++||+|+|+|||+||+++|++ +.+|++|+|+||+|+|+|+|++.|++|||+|+|+++|+|+++.+..+|.
T Consensus 5 ~~~~i~V~~dGsg~f~TIq~AI~aap~~---~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~ 81 (319)
T 1gq8_A 5 VGPNVVVAADGSGDYKTVSEAVAAAPED---SKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGS 81 (319)
T ss_dssp SCCSEEECTTSCSSBSSHHHHHHHSCSS---CSSCEEEEECSEEEECCEEECTTCCSEEEEESCTTTEEEEECCCTTTTC
T ss_pred ccceEEECCCCCCCccCHHHHHHhcccc---CCceEEEEEcCCeEeeeeeccCCCccEEEEEcCCCccEEEecccccCCC
Confidence 5679999999999999999999999998 5678999999999999999999899999999999999999999888899
Q ss_pred ccccceeEEEEcCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccccceEeecCcceeeeccEEEeccceeee
Q 008485 326 TTFNSATFAVVAPKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFG 405 (564)
Q Consensus 326 ~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~~~~~r~~~~~C~I~G~vDFIfG 405 (564)
+|++++||.|.+++|+++||||+|++|+.++|||||++.+|+++|+||+|+|||||||++.+||||++|+|+|+||||||
T Consensus 82 ~t~~satv~v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~vDFIfG 161 (319)
T 1gq8_A 82 TTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFG 161 (319)
T ss_dssp CTGGGCSEEECSTTCEEEEEEEEECCCGGGCCCCSEEECCTTEEEEEEEEECSTTCEEECSSEEEEESCEEEESSSCEEE
T ss_pred CccceEEEEEECCCEEEEEeEeEccCCCcCCceEEEEecCCcEEEEEeEECccceeeeecCccEEEEecEEEeeeeEEec
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred cceeEeeeeeeeeeCCCCCCceeEEecCCCCCCCCceEEEEccEEeecCCCCCCCCcceEEeeccccCcCcEEEeccCCC
Q 008485 406 NAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRASSDLASGSQTVQTYLGRPWKEYSRTVYMQSFMD 485 (564)
Q Consensus 406 ~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~s~i~ 485 (564)
+++++||+|+|+++++..++.++||||||+++++++||||+||+|++++++.+.....++||||||++|+|+|||+|+|+
T Consensus 162 ~~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~ 241 (319)
T 1gq8_A 162 NAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSIT 241 (319)
T ss_dssp SCEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSSTTCEEEEESCEEC
T ss_pred CCcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecccCCCcceEEEEeccCC
Confidence 99999999999999987788899999999999999999999999999987655434458999999999999999999999
Q ss_pred CccCCCCCcCCCCCCCCCccEEEEecccCCCCCCCCccccCCccccC-CHHHHcccchhccccCCCCcCCCCCCccCCC
Q 008485 486 SSINPAGWQIWSGDFALSTLYYAEYNNTGPGSNTANRVTWPGYHVTI-NATDAANFTVSNFLLGDDWIPQTGVSYTGAL 563 (564)
Q Consensus 486 ~~I~p~GW~~w~~~~~~~t~~f~Ey~n~GpGa~~s~Rv~w~~~~~~l-~~~ea~~ft~~~fi~g~~W~p~~~vp~~~~~ 563 (564)
++|+|+||.+|++.+++++++|+||+|+|||+++++||+|+++|+ | +++||++|++.+||+|++|+|.+||||.+||
T Consensus 242 ~~I~p~GW~~w~~~~~~~t~~y~Ey~n~GpGa~~~~Rv~w~~~~~-l~~~~ea~~~t~~~~i~g~~W~p~~~~~~~~~~ 319 (319)
T 1gq8_A 242 NVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKV-ITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319 (319)
T ss_dssp TTBCTTCCCCSSTTTTTTTCEEEEESCBSGGGCCTTCCCCTTEEE-CCCHHHHHTTSHHHHSCGGGTSGGGTSCCCCCC
T ss_pred CcccccccCcCCCCCCCCeeEEEEEccccCCCCcccccccccccc-cCCHHHHHhhhHHhhcCCCCCcCCCCccccCCC
Confidence 999999999999988899999999999999999999999999877 5 5689999999999999999999999999997
No 3
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=100.00 E-value=3e-79 Score=642.05 Aligned_cols=287 Identities=31% Similarity=0.538 Sum_probs=240.3
Q ss_pred cceEEEcCC-CCCCcccHHHHHHhCCCCCCCCCceEEEEEcCcEEeeeEEEEecCcceEEeecCCcceEEecccccc---
Q 008485 247 SDIVTVSQD-GSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVV--- 322 (564)
Q Consensus 247 ~~~~~V~~d-g~g~f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~Itl~G~g~~~tiI~~~~~~~--- 322 (564)
..+++|++| |+|+|+|||+||+++|++ ++|++|+|+||+|+|+|+|+ |++|||+|+|+++|+|+++.+..
T Consensus 30 ~~~~~V~~~~g~g~f~TIq~Ai~aa~~~----~~~~~I~I~~G~Y~E~v~I~--k~~itl~G~g~~~TiIt~~~~~~~~~ 103 (364)
T 3uw0_A 30 QYNAVVSTTPQGDEFSSINAALKSAPKD----DTPFIIFLKNGVYTERLEVA--RSHVTLKGENRDGTVIGANTAAGMLN 103 (364)
T ss_dssp --------------CCCHHHHHHHSCSS----SSCEEEEECSEEECCCEEEC--STTEEEEESCTTTEEEEECCCTTSBC
T ss_pred CceEEEcCCCCCCCcccHHHHHhhcccC----CCcEEEEEeCCEEEEEEEEc--CCeEEEEecCCCCeEEEccccccccc
Confidence 468999999 999999999999999987 36799999999999999997 46899999999999999987432
Q ss_pred ---CCcccccceeEEEEcCCeEEEeeEEeeCCC-----------C---cccceeeEec--CCCceEEEeCccccccceEe
Q 008485 323 ---DGWTTFNSATFAVVAPKFVAVNITIRNTAG-----------A---IKHQAVALRN--GADLSTFYSCSFEAYQDTLY 383 (564)
Q Consensus 323 ---~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g-----------~---~~~qAvAl~~--~~d~~~f~~C~~~g~QDTL~ 383 (564)
++++|++++||.|.+++|+++||||+|+++ | ..+|||||++ ++|+++||||+|+|||||||
T Consensus 104 ~~g~~~gt~~saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy 183 (364)
T 3uw0_A 104 PQGEKWGTSGSSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLY 183 (364)
T ss_dssp TTCSBCCTTTCCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEE
T ss_pred cccccccccCeeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceE
Confidence 346799999999999999999999999985 2 3589999999 59999999999999999999
Q ss_pred ec-CcceeeeccEEEeccceeeecceeEeeeeeeeeeCCCC--CCceeEEecCCCCCCCCceEEEEccEEeecCCCCCCC
Q 008485 384 TH-SLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMS--GQFNAITAQGRTDPNQNTGTSIHNCTIRASSDLASGS 460 (564)
Q Consensus 384 ~~-~~r~~~~~C~I~G~vDFIfG~~~a~f~~c~i~~~~~~~--~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~ 460 (564)
++ .+||||++|+|+|+||||||+|++|||+|+|+++.+.. ++.|+||||+ +++++++||||+||+|++++++..
T Consensus 184 ~~~~gr~yf~~c~I~GtvDFIFG~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~-~~~~~~~G~vf~~c~i~~~~~~~~-- 260 (364)
T 3uw0_A 184 SKTGSRSYFSDCEISGHVDFIFGSGITVFDNCNIVARDRSDIEPPYGYITAPS-TLTTSPYGLIFINSRLTKEPGVPA-- 260 (364)
T ss_dssp ECTTCEEEEESCEEEESEEEEEESSEEEEESCEEEECCCSSCSSCCEEEEEEC-CCTTCSCCEEEESCEEEECTTCCS--
T ss_pred eCCCCCEEEEcCEEEcCCCEECCcceEEEEeeEEEEeccCcccCCccEEEeCC-cCCCCCcEEEEEeeEEecCCCCcc--
Confidence 99 89999999999999999999999999999999986532 3568999995 567899999999999999876432
Q ss_pred CcceEEeeccccCc--------------CcEEEeccCCCCccCCCCCcCCCCCC--------CCCccEEEEecccCCCCC
Q 008485 461 QTVQTYLGRPWKEY--------------SRTVYMQSFMDSSINPAGWQIWSGDF--------ALSTLYYAEYNNTGPGSN 518 (564)
Q Consensus 461 ~~~~~yLGRpW~~~--------------sr~v~~~s~i~~~I~p~GW~~w~~~~--------~~~t~~f~Ey~n~GpGa~ 518 (564)
.++||||||++| +|||||+|+|+++| +||.+|++.. .+++++|+||+|+|||++
T Consensus 261 --~~~yLGRPW~~~s~~~~g~yadp~a~~rvVf~~s~m~~~I--~GW~~w~~~~~~~~~~~~~~~~~~f~Ey~n~GpGa~ 336 (364)
T 3uw0_A 261 --NSFALGRPWHPTTTFADGRYADPAAIGQSVFINTTMDDHI--YGWDKMSGKDKQGEKIWFYPQDSRFFEANSQGPGAA 336 (364)
T ss_dssp --SCEEEECCCCCEEECSSCEEECTTCCCEEEEESCEECTTE--EECCCEEEECTTSCEEEECGGGSEEEEESCBSTTCC
T ss_pred --ccEEeccccccccccccccccccCccceEEEEeCCCCcee--ecccccCCCCccCceeeeccCCceEEEEeCCCCCCC
Confidence 478999999985 49999999999999 9999998642 234678999999999998
Q ss_pred CCCccccCCccccCCHHHHcccchhccccCCCCcCC
Q 008485 519 TANRVTWPGYHVTINATDAANFTVSNFLLGDDWIPQ 554 (564)
Q Consensus 519 ~s~Rv~w~~~~~~l~~~ea~~ft~~~fi~g~~W~p~ 554 (564)
++.+. +. |+++||++|++++||+| |+|.
T Consensus 337 ~~~~r-----~~-ls~~ea~~~t~~~~l~g--W~P~ 364 (364)
T 3uw0_A 337 INEGR-----RQ-LSAEQLKAFTLPMIFPD--WAVH 364 (364)
T ss_dssp CSTTS-----CB-CCHHHHGGGSHHHHSTT--CCC-
T ss_pred cCCce-----eE-CCHHHHhhccHHHhhcC--CCCC
Confidence 64321 23 99999999999999975 9994
No 4
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=100.00 E-value=3.4e-79 Score=638.75 Aligned_cols=288 Identities=35% Similarity=0.566 Sum_probs=255.0
Q ss_pred cceEEEc--CCCCCCcccHHHHHHhCCCCCCCCCceEEEEEcCcEEeeeEEEEecCcceEEeecCCcceEEeccccc---
Q 008485 247 SDIVTVS--QDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSV--- 321 (564)
Q Consensus 247 ~~~~~V~--~dg~g~f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~Itl~G~g~~~tiI~~~~~~--- 321 (564)
..+++|+ +||+|+|+|||+||+++|++ + +|++|+|+||+|+|+|+|+| ++|||+|+|+++|+|+++.+.
T Consensus 3 ~~~~vV~~~~~g~g~f~TIq~Ai~aap~~---~-~~~~I~I~~G~Y~E~V~I~k--~~Itl~G~g~~~tiI~~~~~~~~~ 76 (342)
T 2nsp_A 3 TYNAVVSKSSSDGKTFKTIADAIASAPAG---S-TPFVILIKNGVYNERLTITR--NNLHLKGESRNGAVIAAATAAGTL 76 (342)
T ss_dssp CCSEEECSCSSSCSCBSSHHHHHHTSCSS---S-SCEEEEECSEEEECCEEECS--TTEEEEESCTTTEEEEECCCTTCB
T ss_pred ccEEEEccCCCCCCCcchHHHHHHhcccC---C-CcEEEEEeCCEEEEEEEEec--CeEEEEecCCCCeEEEeccccccc
Confidence 4689999 99999999999999999987 4 78999999999999999964 689999999999999998643
Q ss_pred ---cCCcccccceeEEEEcCCeEEEeeEEeeCC-----------CC---cccceeeE--ecCCCceEEEeCccccccceE
Q 008485 322 ---VDGWTTFNSATFAVVAPKFVAVNITIRNTA-----------GA---IKHQAVAL--RNGADLSTFYSCSFEAYQDTL 382 (564)
Q Consensus 322 ---~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~-----------g~---~~~qAvAl--~~~~d~~~f~~C~~~g~QDTL 382 (564)
.++++|++++||.|.+++|+++||||+|++ ++ ..+||||| ++.+|+++|+||+|+||||||
T Consensus 77 ~~~g~~~gT~~satv~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTL 156 (342)
T 2nsp_A 77 KSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATL 156 (342)
T ss_dssp CTTSCBCHHHHTCSEEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCE
T ss_pred ccccCcccccceeEEEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceE
Confidence 124678899999999999999999999998 22 36899999 899999999999999999999
Q ss_pred eecCcceeeeccEEEeccceeeecceeEeeeeeeeeeCCCC-CC---ceeEEecCCCCCCCCceEEEEccEEeecCCCCC
Q 008485 383 YTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMS-GQ---FNAITAQGRTDPNQNTGTSIHNCTIRASSDLAS 458 (564)
Q Consensus 383 ~~~~~r~~~~~C~I~G~vDFIfG~~~a~f~~c~i~~~~~~~-~~---~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~ 458 (564)
|++.+||||++|+|+|+||||||+++++||+|+|+++++.. ++ .++||||+ +++.+++||||+||+|++++++.+
T Consensus 157 y~~~gr~~~~~c~I~G~vDFIFG~a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~-~~~~~~~G~vf~~c~i~~~~~~~~ 235 (342)
T 2nsp_A 157 YVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVITNSRVIRESDSVP 235 (342)
T ss_dssp EECSSEEEEESCEEEESEEEEEESSEEEEESCEEEECCCTTSCTTSCCEEEEEEC-CBTTCSCCEEEESCEEEESSTTSC
T ss_pred EECCCCEEEEcCEEEeceEEEeCCceEEEecCEEEEecCcccccccCceEEEccC-CCCCCCCEEEEEcCEEecCCCCCc
Confidence 99999999999999999999999999999999999987532 22 38999995 567899999999999999876433
Q ss_pred CCCcceEEeeccccCcC--------------cEEEeccCCCCccCCCCCcCCCCC--------CCCCccEEEEecccCCC
Q 008485 459 GSQTVQTYLGRPWKEYS--------------RTVYMQSFMDSSINPAGWQIWSGD--------FALSTLYYAEYNNTGPG 516 (564)
Q Consensus 459 ~~~~~~~yLGRpW~~~s--------------r~v~~~s~i~~~I~p~GW~~w~~~--------~~~~t~~f~Ey~n~GpG 516 (564)
..++||||||++|| |+|||+|+|+++|+ ||.+|++. +.+++++|+||+|+|||
T Consensus 236 ---~~~~yLGRpW~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~I~--GW~~w~~~~~~~~~~~~~~~~~~f~EY~n~GpG 310 (342)
T 2nsp_A 236 ---AKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHIY--GWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAG 310 (342)
T ss_dssp ---TTCEEEECCCCCEEEETTEEEECTTBCCEEEEESCEECTTEE--ECCCEEEECTTSCEEEECGGGSEEEEESCBSTT
T ss_pred ---cccEEEEeccccccccccccccCCccceeEEEEccccCcccc--cccccCCCCccCceeecccCccEEEEEecccCC
Confidence 24899999999999 99999999999998 99999863 34467899999999999
Q ss_pred CCCCCccccCCccccCCHHHHcccchhccccCCCCcCC
Q 008485 517 SNTANRVTWPGYHVTINATDAANFTVSNFLLGDDWIPQ 554 (564)
Q Consensus 517 a~~s~Rv~w~~~~~~l~~~ea~~ft~~~fi~g~~W~p~ 554 (564)
++++ +|. ++ |+++||++|++.+||+ +|+|.
T Consensus 311 a~~~---~~~--~~-l~~~ea~~~t~~~~i~--~W~p~ 340 (342)
T 2nsp_A 311 ATVS---KDR--RQ-LTDAQAAEYTQSKVLG--DWTPT 340 (342)
T ss_dssp CCCS---TTS--CB-CCHHHHGGGSHHHHHT--TCCCC
T ss_pred CCCC---CCc--eE-CCHHHHHhhhHHhhhc--cCCCC
Confidence 9874 222 34 9999999999999996 49996
No 5
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=100.00 E-value=1.1e-74 Score=610.03 Aligned_cols=265 Identities=26% Similarity=0.257 Sum_probs=232.0
Q ss_pred cccceEEEcCCCCC--CcccHHHHHHhCCCCCCCCCceEEEEEcCcEEeeeEEEEecCcceEEeecCCcceEEecccc--
Q 008485 245 LVSDIVTVSQDGSG--NFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRS-- 320 (564)
Q Consensus 245 ~~~~~~~V~~dg~g--~f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~Itl~G~g~~~tiI~~~~~-- 320 (564)
..+++++|++||+| +|+|||+||+++|+.. +..|++|+|+||+|+|+|+|++.|++|||+|+|.++++|+...+
T Consensus 72 ~~~~~ivVa~dGsG~~~f~TIqeAVdaap~~~--~~~r~vI~Ik~GvY~E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~ 149 (422)
T 3grh_A 72 PAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKR--TNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLD 149 (422)
T ss_dssp CSSCSEEECSTTCTTCCBSSHHHHHHHHHTTC--CSSCEEEEECSEEEESCEEECCCSSCEEEEECSSSGGGEEEEECCC
T ss_pred CCCccEEEeCCCCCCcCcCCHHHHHHhchhcC--CCccEEEEEeCCeEeeeEEecCCCCcEEEEeccCCCceEEEeeccc
Confidence 35689999999998 9999999999997532 56789999999999999999999999999999998776654211
Q ss_pred -----------------cc-----------------CCcccccceeEEEEcCCeEEEeeEEeeCCCC----cccceeeEe
Q 008485 321 -----------------VV-----------------DGWTTFNSATFAVVAPKFVAVNITIRNTAGA----IKHQAVALR 362 (564)
Q Consensus 321 -----------------~~-----------------~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g~----~~~qAvAl~ 362 (564)
.. ...+|+.||||.|.|++|+++||||+|++|+ .++|||||+
T Consensus 150 ~~~~~~d~~~~~n~~G~~~~G~~aw~tf~~~~~~~sat~gT~~SAT~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~ 229 (422)
T 3grh_A 150 GGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALR 229 (422)
T ss_dssp TTSCHHHHHHHHCGGGSSCTTSTTHHHHHHHHTCCSSSCCGGGCCSEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEE
T ss_pred ccccccccccccccccccccCccccccccccccccccceeccceEEEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEE
Confidence 00 1236788999999999999999999999986 468999999
Q ss_pred cCCCceEEEeCccccccceEee------------cCcceeeeccEEEeccceeeecceeEeeeeeeeeeCCCCCCceeEE
Q 008485 363 NGADLSTFYSCSFEAYQDTLYT------------HSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMSGQFNAIT 430 (564)
Q Consensus 363 ~~~d~~~f~~C~~~g~QDTL~~------------~~~r~~~~~C~I~G~vDFIfG~~~a~f~~c~i~~~~~~~~~~~~it 430 (564)
+.+|+++||+|+|+|||||||+ +.+||||++|+|+|+||||||+|++|||+|+|+++++..++.++||
T Consensus 230 v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtVDFIFG~a~AvFe~C~I~s~~~~~~~~g~IT 309 (422)
T 3grh_A 230 TDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVF 309 (422)
T ss_dssp ECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEESEEEEEESSEEEEESCEEEECCSSCSSCCEEE
T ss_pred ecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEeccccEEccCceEEEEeeEEEEecCCCCCceEEE
Confidence 9999999999999999999998 5799999999999999999999999999999999987656678999
Q ss_pred ecCCCCCCCCceEEEEccEEeecCCCCCCCCcceEEeeccccCcCc----EEEeccCCCCccCC-CCCcCCCCC---CC-
Q 008485 431 AQGRTDPNQNTGTSIHNCTIRASSDLASGSQTVQTYLGRPWKEYSR----TVYMQSFMDSSINP-AGWQIWSGD---FA- 501 (564)
Q Consensus 431 A~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr----~v~~~s~i~~~I~p-~GW~~w~~~---~~- 501 (564)
|+ |+++.+++||||+||+|+++++ .++||||||++|+| ||||+|+|+++|+| +||.+|... |.
T Consensus 310 A~-~t~~~~~~Gfvf~nC~ita~~~-------~~~yLGRPW~~ysrt~~qVVf~~s~l~~~I~p~~GW~~m~~s~r~f~~ 381 (422)
T 3grh_A 310 AP-ATLSNIYYGFLAVNSRFNAFGD-------GVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAG 381 (422)
T ss_dssp EE-CCBTTCCCCEEEESCEEEECSS-------SCBEEEEEECCSTTBCCEEEEESCEECTTBCSSCCEEEEETTCCCCCC
T ss_pred ec-CCCCCCCCEEEEECCEEEeCCC-------CCEEcCCCCCCcCCcCccEEEEeCcccCccCCCCCchhhhccCCCccc
Confidence 98 7888999999999999998652 47999999999998 69999999999998 999999432 11
Q ss_pred -----------------CCccEEEEecccCCCCCC
Q 008485 502 -----------------LSTLYYAEYNNTGPGSNT 519 (564)
Q Consensus 502 -----------------~~t~~f~Ey~n~GpGa~~ 519 (564)
....+|+||+|+|||+-.
T Consensus 382 ~~~~~~~~~~~~r~l~~~~~nR~~ey~n~g~g~~~ 416 (422)
T 3grh_A 382 NTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKV 416 (422)
T ss_dssp CCCEEETTTEEECCTTCTTSCEEEEESCBSGGGC-
T ss_pred ccccccccccccccCCCcchhheeEecccCCCccc
Confidence 135689999999999853
No 6
>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}
Probab=99.95 E-value=6.2e-28 Score=223.42 Aligned_cols=142 Identities=17% Similarity=0.239 Sum_probs=129.4
Q ss_pred chhhcccCCCCCccchhccCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCHhHHHHHHHHHHHHHH
Q 008485 36 VSAGSVCKSTPDPSFCKSVLPNQT----ANVYTYGRFSIRKALWQSRKFLNLVDKYLTRRATLSTTAIRALEDCRLLAGF 111 (564)
Q Consensus 36 ~~v~~~C~~T~yp~lC~~sL~~~~----~dp~~L~~~al~~a~~~a~~a~~~i~~ll~~~~~~d~~~k~AL~DC~el~~d 111 (564)
+.|+.+|++|+||++|+++|.+.| +||++|++++|++++.+++.+...+++++... .+++.+.||+||.|+|++
T Consensus 4 ~~i~~~C~~T~~~~~C~~sL~~~~~~~~~~~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~--~~~~~~~al~dC~e~y~~ 81 (153)
T 1xg2_B 4 HLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTNQA--TDPKLKGRYETCSENYAD 81 (153)
T ss_dssp HHHHHHGGGSSCHHHHHHHHHTCTTGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhcCCCChHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHH
Confidence 689999999999999999998765 69999999999999999999999999986543 489999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCCCCCChhhHHHHHHHHhhhhhhHhhhccCCccccccccccccccchhHHHHHHHHHhhcc
Q 008485 112 NMDFLLSSFETVNSTSKTLPTMQADDVQTFLSAILTNQQTCFDGLQDTASAWSVKNGLSLPLSNDTKLYSVSLALFTK 189 (564)
Q Consensus 112 aid~L~~S~~~l~~~~~~~~~~~~~Dv~TWLSAAlT~q~TC~DGF~e~~~~~~~~~~l~~~l~~~~~L~SNaLAiv~~ 189 (564)
++++|++++.+|+. ..++|++||||+||||++||+|||.+.+ .++++|...+.++.+|+||+|||++.
T Consensus 82 a~~~L~~a~~~l~~-------~~~~d~~t~lSaAlt~~~tC~dgf~~~~---~~~~~l~~~~~~~~~l~s~aLai~~~ 149 (153)
T 1xg2_B 82 AIDSLGQAKQFLTS-------GDYNSLNIYASAAFDGAGTCEDSFEGPP---NIPTQLHQADLKLEDLCDIVLVISNL 149 (153)
T ss_dssp HHHHHHHHHHHHHH-------TCHHHHHHHHHHHHHHHHHHHHHCCSSS---CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-------CCHHHHHHHHHHHhcccchHHHHhccCC---CCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999985 3589999999999999999999998764 24678889999999999999999985
No 7
>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A
Probab=99.95 E-value=7.6e-28 Score=223.15 Aligned_cols=142 Identities=18% Similarity=0.278 Sum_probs=128.5
Q ss_pred chhhcccCCCCCccchhccCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCHhHHHHHHHHHHHHHHHH
Q 008485 36 VSAGSVCKSTPDPSFCKSVLPNQ--TANVYTYGRFSIRKALWQSRKFLNLVDKYLTRRATLSTTAIRALEDCRLLAGFNM 113 (564)
Q Consensus 36 ~~v~~~C~~T~yp~lC~~sL~~~--~~dp~~L~~~al~~a~~~a~~a~~~i~~ll~~~~~~d~~~k~AL~DC~el~~dai 113 (564)
+.|+.+|++|+||++|+++|.+. +.||++|++++|++++.+++.+...+++++... .+++.+.||+||.|+|++++
T Consensus 6 ~~i~~~C~~T~~~~~C~~sL~p~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~l~~~~--~~~~~~~al~dC~e~y~~a~ 83 (153)
T 1x91_A 6 SEMSTICDKTLNPSFCLKFLNTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGG--VDPRSKLAYRSCVDEYESAI 83 (153)
T ss_dssp CSTTTGGGGSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCChhHHHHHhCcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999332 369999999999999999999999999987653 48999999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCChhhHHHHHHHHhhhhhhHhhhccCCccccccccccccccchhHHHHHHHHHhhcc
Q 008485 114 DFLLSSFETVNSTSKTLPTMQADDVQTFLSAILTNQQTCFDGLQDTASAWSVKNGLSLPLSNDTKLYSVSLALFTK 189 (564)
Q Consensus 114 d~L~~S~~~l~~~~~~~~~~~~~Dv~TWLSAAlT~q~TC~DGF~e~~~~~~~~~~l~~~l~~~~~L~SNaLAiv~~ 189 (564)
++|++++.+|+. ..++|++||||+||||++||+|||.+.+ +++++|...+.++.+|+||+|+|++.
T Consensus 84 ~~L~~a~~~l~~-------~~~~d~~t~lSaAlt~~~tC~dgf~~~~---~~~~~l~~~~~~~~~l~s~aLai~~~ 149 (153)
T 1x91_A 84 GNLEEAFEHLAS-------GDGMGMNMKVSAALDGADTCLDDVKRLR---SVDSSVVNNSKTIKNLCGIALVISNM 149 (153)
T ss_dssp HHHHHHHHHHHT-------TCHHHHHHHHHHHHHHHHHHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-------cCHHHHHHHHHHHHccHhHHHHHhccCC---CCcCHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999985 3589999999999999999999998764 35678899999999999999999985
No 8
>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B*
Probab=99.94 E-value=7.8e-27 Score=215.78 Aligned_cols=140 Identities=14% Similarity=0.151 Sum_probs=125.8
Q ss_pred chhhcccCCCCCccchhccCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCHhHHHHHHHHHHHHHH
Q 008485 36 VSAGSVCKSTPDPSFCKSVLPNQT----ANVYTYGRFSIRKALWQSRKFLNLVDKYLTRRATLSTTAIRALEDCRLLAGF 111 (564)
Q Consensus 36 ~~v~~~C~~T~yp~lC~~sL~~~~----~dp~~L~~~al~~a~~~a~~a~~~i~~ll~~~~~~d~~~k~AL~DC~el~~d 111 (564)
+.|+.+|++|+||++|+++|.+.| +||++|++++|++++.+++.+...+++++... .+++.+.||+||.|+|++
T Consensus 5 ~~I~~~C~~T~~~~~C~~sL~~~~~s~~ad~~~la~~ai~~~~~~a~~~~~~i~~l~~~~--~~~~~~~al~dC~e~y~~ 82 (150)
T 2cj4_A 5 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSN--PPAAWKGPLKNCAFSYKV 82 (150)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHTSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--CCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCccHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHHHH
Confidence 689999999999999999998754 69999999999999999999999999976543 478999999999999999
Q ss_pred HH-HHHHHHHHHhccCCCCCCCCChhhHHHHHHHHhhhhhhHhhhccCCccccccccccccccchhHHHHHHHHHhhccc
Q 008485 112 NM-DFLLSSFETVNSTSKTLPTMQADDVQTFLSAILTNQQTCFDGLQDTASAWSVKNGLSLPLSNDTKLYSVSLALFTKA 190 (564)
Q Consensus 112 ai-d~L~~S~~~l~~~~~~~~~~~~~Dv~TWLSAAlT~q~TC~DGF~e~~~~~~~~~~l~~~l~~~~~L~SNaLAiv~~~ 190 (564)
++ ++|++++.+++. ..+.|+++|||+|+||++||+|||.+. +++|...+.++.+|+||+|||++.+
T Consensus 83 a~~~~L~~a~~~l~~-------~~~~~~~t~lsaAlt~~~tC~dgf~~~------~~pl~~~~~~~~~l~s~aLaii~~l 149 (150)
T 2cj4_A 83 ILTASLPEAIEALTK-------GDPKFAEDGMVGSSGDAQECEEYFKGS------KSPFSALNIAVHELSDVGRAIVRNL 149 (150)
T ss_dssp HHHTHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHHHHTTTTS------CCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHhhCCC------CCccHHHHHHHHHHHHHHHHHHHhh
Confidence 99 799999999985 358999999999999999999999732 3468888999999999999999853
No 9
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.62 E-value=1.3e-14 Score=154.41 Aligned_cols=142 Identities=17% Similarity=0.180 Sum_probs=112.1
Q ss_pred ccceEEEcCCCC----C-----CcccHHHHHHhCCCCCCCCCceEEEEEcCcEEe--------eeEEEEecC---cceEE
Q 008485 246 VSDIVTVSQDGS----G-----NFTTITDAINVAPNNTDVTNGYFLIYITAGVYE--------EYISISKNK---KNLMI 305 (564)
Q Consensus 246 ~~~~~~V~~dg~----g-----~f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~--------E~v~I~~~~---~~Itl 305 (564)
...++.|+++|+ | .| |||+|+++|+++ ++|+|++|+|+ |.|.+.++. .+|+|
T Consensus 13 ~~~~~yVsp~Gsd~~~G~t~~~P~-tiq~Ai~~a~pG-------dtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti 84 (400)
T 1ru4_A 13 TKRIYYVAPNGNSSNNGSSFNAPM-SFSAAMAAVNPG-------ELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYV 84 (400)
T ss_dssp CSCEEEECTTCCTTCCSSSTTSCB-CHHHHHHHCCTT-------CEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEE
T ss_pred CccEEEEcCCCCCCCCCccccCCc-cHHHHHhhCCCC-------CEEEECCCeEccccccccceeEEecCCCCCCCCEEE
Confidence 356888998764 4 79 999999999988 79999999999 678887543 47999
Q ss_pred eecCCcceEEeccccccCCcccccceeEEEEcCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccccce-Eee
Q 008485 306 IGDGINQTVITGNRSVVDGWTTFNSATFAVVAPKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAYQDT-LYT 384 (564)
Q Consensus 306 ~G~g~~~tiI~~~~~~~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~QDT-L~~ 384 (564)
.|++.++++|++.. ..+.....+.+|.|.++++++++|+|+|+..+ +|++.+++..|++|+|.+.+|+ |++
T Consensus 85 ~~~~g~~~vI~~~~--~~g~~~~~~~~i~i~~~~~~i~gl~I~n~g~~------GI~v~gs~~~i~n~~i~~n~~~GI~l 156 (400)
T 1ru4_A 85 AAANCGRAVFDFSF--PDSQWVQASYGFYVTGDYWYFKGVEVTRAGYQ------GAYVIGSHNTFENTAFHHNRNTGLEI 156 (400)
T ss_dssp EEGGGCCEEEECCC--CTTCCCTTCCSEEECSSCEEEESEEEESCSSC------SEEECSSSCEEESCEEESCSSCSEEE
T ss_pred EEecCCCCEEeCCc--cCCccccceeEEEEECCeEEEEeEEEEeCCCC------cEEEeCCCcEEEeEEEECCCceeEEE
Confidence 99988899998321 11111111366899999999999999998642 6788889999999999999994 888
Q ss_pred cCc--ceeeeccEEEecccee
Q 008485 385 HSL--RQFYRECDIYGTVDFI 403 (564)
Q Consensus 385 ~~~--r~~~~~C~I~G~vDFI 403 (564)
... ...+++|+|.++.|..
T Consensus 157 ~~~~s~n~I~nn~i~~N~d~~ 177 (400)
T 1ru4_A 157 NNGGSYNTVINSDAYRNYDPK 177 (400)
T ss_dssp CTTCCSCEEESCEEECCCCTT
T ss_pred EcccCCeEEEceEEEcccCcc
Confidence 753 5678899998887653
No 10
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.42 E-value=8.7e-13 Score=143.96 Aligned_cols=147 Identities=16% Similarity=0.244 Sum_probs=114.2
Q ss_pred eEEEcCCCCCCcccHHHHHHhCCCCCCCCCceEEEEEcCcEEee-eEEEEec---CcceEEeecCCcceEEeccccccCC
Q 008485 249 IVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEE-YISISKN---KKNLMIIGDGINQTVITGNRSVVDG 324 (564)
Q Consensus 249 ~~~V~~dg~g~f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E-~v~I~~~---~~~Itl~G~g~~~tiI~~~~~~~~g 324 (564)
++.|+ ++.+||+||++|+++ ++|+|++|+|+| .+.|.++ ..+|||.|++.++++|.|.
T Consensus 25 ~i~V~-----~~~~Lq~Ai~~A~pG-------DtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~------ 86 (506)
T 1dbg_A 25 GQVVA-----SNETLYQVVKEVKPG-------GLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD------ 86 (506)
T ss_dssp -CEEC-----SHHHHHHHHHHCCTT-------CEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEES------
T ss_pred EEEeC-----CHHHHHHHHHhCCCC-------CEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCC------
Confidence 34676 368999999999998 799999999998 7888432 2479999997778999875
Q ss_pred cccccceeEEEEcCCeEEEeeEEeeCCCCcc----cceeeEecCCCceEEEeCccccccce--Eeec---------Ccce
Q 008485 325 WTTFNSATFAVVAPKFVAVNITIRNTAGAIK----HQAVALRNGADLSTFYSCSFEAYQDT--LYTH---------SLRQ 389 (564)
Q Consensus 325 ~~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~----~qAvAl~~~~d~~~f~~C~~~g~QDT--L~~~---------~~r~ 389 (564)
.+|.|.|+++++++|+|+|..+... ....++.+.|+++.|.+|+|.++|++ +|++ +.+.
T Consensus 87 ------~~l~i~g~~v~i~GL~i~~~~~~~~~~~~~~~~~iav~G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n 160 (506)
T 1dbg_A 87 ------AKVELRGEHLILEGIWFKDGNRAIQAWKSHGPGLVAIYGSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHC 160 (506)
T ss_dssp ------CEEEECSSSEEEESCEEEEECCCTTTCCTTSCCSEEECSSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSC
T ss_pred ------ceEEEEcCCEEEECeEEECCCcceeeeecccccceEEecCCeEEEeeEEEcCCCCceeeEeecccceeeecccc
Confidence 4789999999999999999875321 11234556689999999999999999 7774 3456
Q ss_pred eeeccEEEeccce---eeec---------------ceeEeeeeeeeee
Q 008485 390 FYRECDIYGTVDF---IFGN---------------AAVVLQNCNIYPR 419 (564)
Q Consensus 390 ~~~~C~I~G~vDF---IfG~---------------~~a~f~~c~i~~~ 419 (564)
.+++|+|+|..+. +-|+ ...++++|.|..+
T Consensus 161 ~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~ 208 (506)
T 1dbg_A 161 RIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNP 208 (506)
T ss_dssp EEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEEC
T ss_pred EEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEccc
Confidence 8999999997553 3232 3567889988865
No 11
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.49 E-value=6.4e-07 Score=94.21 Aligned_cols=134 Identities=15% Similarity=0.166 Sum_probs=89.0
Q ss_pred EEEEEcCcEEe--eeEEEEecCcceEEeecCCcceE---Eecccccc-------CCc------ccccceeEEEEc-----
Q 008485 281 FLIYITAGVYE--EYISISKNKKNLMIIGDGINQTV---ITGNRSVV-------DGW------TTFNSATFAVVA----- 337 (564)
Q Consensus 281 ~~I~I~~G~Y~--E~v~I~~~~~~Itl~G~g~~~ti---I~~~~~~~-------~g~------~t~~sat~~v~~----- 337 (564)
.+|+|+||+|+ ++|+|+| |+|||.|++. .++ |.++-... .|. .-...+.|.|++
T Consensus 58 dvI~L~~G~Y~l~g~ivIdk--p~LtL~G~~~-g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r 134 (410)
T 2inu_A 58 AAIIIPPGDYDLHTQVVVDV--SYLTIAGFGH-GFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPR 134 (410)
T ss_dssp EEEECCSEEEEECSCEEECC--TTEEEECSCC-CCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSC
T ss_pred CEEEECCCeeccCCcEEEec--CcEEEEecCC-CcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcc
Confidence 89999999997 8999985 5699999874 333 66331110 000 011346677777
Q ss_pred -CCeEEEeeEEeeC-----CCCcccceeeEecC--CCceEEEeCccccccceEeecCcce-eeeccEEEe---ccceeee
Q 008485 338 -PKFVAVNITIRNT-----AGAIKHQAVALRNG--ADLSTFYSCSFEAYQDTLYTHSLRQ-FYRECDIYG---TVDFIFG 405 (564)
Q Consensus 338 -~~f~~~~lt~~Nt-----~g~~~~qAvAl~~~--~d~~~f~~C~~~g~QDTL~~~~~r~-~~~~C~I~G---~vDFIfG 405 (564)
+++++++++|++. ......+-.+|++. +|++.+++|.|.+....++++.... -.+++.|.+ .++ .||
T Consensus 135 ~s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~fGI~l~~a~~~~I~~N~I~e~GNgI~-L~G 213 (410)
T 2inu_A 135 LSGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYLEHALIVRGADALRVNDNMIAECGNCVE-LTG 213 (410)
T ss_dssp EECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESCSEEEEETTEESCEEESCEEESSSEEEE-ECS
T ss_pred cCCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEecccEEEEEccCCCcEEECCEEEecCCcee-ecc
Confidence 5566666666655 44445666788886 7899999999999999999997643 566777762 122 345
Q ss_pred c-ceeEeeeeeeee
Q 008485 406 N-AAVVLQNCNIYP 418 (564)
Q Consensus 406 ~-~~a~f~~c~i~~ 418 (564)
. -...++++.+..
T Consensus 214 ~~~~~~I~~N~i~~ 227 (410)
T 2inu_A 214 AGQATIVSGNHMGA 227 (410)
T ss_dssp CEESCEEESCEEEC
T ss_pred ccccceEecceeee
Confidence 2 234566777764
No 12
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=98.26 E-value=1.6e-05 Score=83.17 Aligned_cols=52 Identities=27% Similarity=0.412 Sum_probs=40.8
Q ss_pred CcccHHHHHHhCCCCCCCCCceEEEEEcCcEEee---------eEEEEecCcceEEeecCCcceEEecc
Q 008485 259 NFTTITDAINVAPNNTDVTNGYFLIYITAGVYEE---------YISISKNKKNLMIIGDGINQTVITGN 318 (564)
Q Consensus 259 ~f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E---------~v~I~~~~~~Itl~G~g~~~tiI~~~ 318 (564)
+-..||+||++|.+. +..+|+|.||+|.. .+.++ .+|+|+|+|+++++|...
T Consensus 18 dt~aiq~Ai~~a~~~-----gg~~v~~p~G~y~~~~~~~~~~g~l~~~---~~v~l~g~g~~~t~l~~~ 78 (377)
T 2pyg_A 18 DRASIQAAIDAAYAA-----GGGTVYLPAGEYRVSAAGEPGDGCLMLK---DGVYLAGAGMGETVIKLI 78 (377)
T ss_dssp CHHHHHHHHHHHHHT-----TSEEEEECSEEEEECCCSSGGGCSEECC---TTEEEEESSBTTEEEEEC
T ss_pred hHHHHHHHHHHHHhc-----CCCEEEECCeEEEEcccccCCcccEEec---CCeEEEEcCCCCcEEEec
Confidence 456899999999752 12799999999996 56664 489999999887877543
No 13
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=98.01 E-value=0.00017 Score=81.13 Aligned_cols=145 Identities=17% Similarity=0.234 Sum_probs=92.0
Q ss_pred cccHHHHHHhCCCCCC----CCCceEEEEEcCcEEe--eeEEEEecCcceEEeecCCcceEEeccccccCCcc-----cc
Q 008485 260 FTTITDAINVAPNNTD----VTNGYFLIYITAGVYE--EYISISKNKKNLMIIGDGINQTVITGNRSVVDGWT-----TF 328 (564)
Q Consensus 260 f~TIq~Ai~aa~~~~~----~~~~~~~I~I~~G~Y~--E~v~I~~~~~~Itl~G~g~~~tiI~~~~~~~~g~~-----t~ 328 (564)
=.-||+||+++..... ....+.+|||.+|+|. ..|.++ .++.|+|++.+.++|....+.. |.. .+
T Consensus 66 T~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~---~~t~L~G~~~~~pvIka~~~F~-G~~li~~d~y 141 (758)
T 3eqn_A 66 TAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVL---YQTQLIGDAKNLPTLLAAPNFS-GIALIDADPY 141 (758)
T ss_dssp HHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSEEEESSCEECC---TTEEEEECSSSCCEEEECTTCC-SSCSEESSCB
T ss_pred HHHHHHHHHHhhhcccccccccccceEEEECCceEEEcccEEcc---CCeEEEecCCCCCeEecCCCCC-Ccceeecccc
Confidence 3579999999855310 0134579999999998 357775 3899999998888886654321 100 00
Q ss_pred --cceeEEEE--cCCeEEEeeEEeeCCCCcccceeeEecC-CCceEEEeCcccc-----c-cceEeecCc-ceeeeccEE
Q 008485 329 --NSATFAVV--APKFVAVNITIRNTAGAIKHQAVALRNG-ADLSTFYSCSFEA-----Y-QDTLYTHSL-RQFYRECDI 396 (564)
Q Consensus 329 --~sat~~v~--~~~f~~~~lt~~Nt~g~~~~qAvAl~~~-~d~~~f~~C~~~g-----~-QDTL~~~~~-r~~~~~C~I 396 (564)
...-..+. --...++||.|..+..+.. +.+|+.. +....+.||.|.. . ++.|+...| .-+..||+|
T Consensus 142 ~~~G~~w~~~~~~F~r~irNlviD~t~~~~~--~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f 219 (758)
T 3eqn_A 142 LAGGAQYYVNQNNFFRSVRNFVIDLRQVSGS--ATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVF 219 (758)
T ss_dssp CGGGCBSSCGGGCCCEEEEEEEEECTTCSSC--EEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEE
T ss_pred CCCCccccccccceeeeecceEEeccccCCC--ceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEE
Confidence 00000000 0134688888887766543 6777764 6778888888875 2 778887754 347788888
Q ss_pred Ee-ccceeeecceeE
Q 008485 397 YG-TVDFIFGNAAVV 410 (564)
Q Consensus 397 ~G-~vDFIfG~~~a~ 410 (564)
.| .+-+.+|+-.-.
T Consensus 220 ~GG~~G~~~gnQQfT 234 (758)
T 3eqn_A 220 NGGNIGATFGNQQFT 234 (758)
T ss_dssp ESCSEEEEEECSCCE
T ss_pred eCCceEEEcCCcceE
Confidence 74 566666764433
No 14
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=97.49 E-value=0.0024 Score=67.07 Aligned_cols=110 Identities=11% Similarity=0.144 Sum_probs=71.4
Q ss_pred eeEEEE-cCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCcccc-----ccceEeecCc-ceeeeccEEEecccee
Q 008485 331 ATFAVV-APKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEA-----YQDTLYTHSL-RQFYRECDIYGTVDFI 403 (564)
Q Consensus 331 at~~v~-~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g-----~QDTL~~~~~-r~~~~~C~I~G~vDFI 403 (564)
..|.+. .+++.++||+|+|+.. ..+.+ ...+.+.+.++.+.+ +-|.+-..+. .-..++|+|...-|-|
T Consensus 152 ~~i~~~~~~nv~I~~iti~nsp~----~~i~~-~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcI 226 (376)
T 1bhe_A 152 RLIQINKSKNFTLYNVSLINSPN----FHVVF-SDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNV 226 (376)
T ss_dssp CSEEEESCEEEEEEEEEEECCSS----CSEEE-ESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSE
T ss_pred eEEEEEcceEEEEEeEEEECCCc----EEEEE-eCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeE
Confidence 345554 6779999999999742 11222 356788999998887 4666766553 3478899998666654
Q ss_pred e--------ecceeEeeeeeeeeeCCCCCCceeEEecCCCCCCCCceEEEEccEEeecC
Q 008485 404 F--------GNAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRASS 454 (564)
Q Consensus 404 f--------G~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~ 454 (564)
. +....+++||.+.. + .| |.. |.... .-..+.|.||+|....
T Consensus 227 aiks~~~~~~s~nI~I~n~~~~~-----g-hG-isi-GSe~~-~v~nV~v~n~~~~~t~ 276 (376)
T 1bhe_A 227 AIKAYKGRAETRNISILHNDFGT-----G-HG-MSI-GSETM-GVYNVTVDDLKMNGTT 276 (376)
T ss_dssp EEEECTTSCCEEEEEEEEEEECS-----S-SC-EEE-EEEES-SEEEEEEEEEEEESCS
T ss_pred EEcccCCCCCceEEEEEeeEEEc-----c-cc-EEe-ccCCc-cEeeEEEEeeEEeCCC
Confidence 3 23457888888853 1 12 322 32211 3457889999998764
No 15
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.49 E-value=0.0044 Score=68.51 Aligned_cols=171 Identities=18% Similarity=0.178 Sum_probs=100.8
Q ss_pred ccHHHHHHhCCCCCCCCCceEEEEEcCcEEee--eEEEEecCcceEEeecCCcceEEecccc------------------
Q 008485 261 TTITDAINVAPNNTDVTNGYFLIYITAGVYEE--YISISKNKKNLMIIGDGINQTVITGNRS------------------ 320 (564)
Q Consensus 261 ~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E--~v~I~~~~~~Itl~G~g~~~tiI~~~~~------------------ 320 (564)
.-||+||++. + +|+|.+|+|.- .|.++ .+++|.|++...++|.....
T Consensus 40 ~Aiq~Ai~~G--g--------~V~iP~GtYlis~~l~l~---snv~L~g~g~~~t~L~~~~~~p~~~~li~~lI~a~~~~ 106 (609)
T 3gq8_A 40 RAFEKAIESG--F--------PVYVPYGTFMVSRGIKLP---SNTVLTGAGKRNAVIRFMDSVGRGESLMYNENVTTGNE 106 (609)
T ss_dssp HHHHHHHHTS--S--------CEEECSEEEEESSCEEEC---SSEEEEESCTTTEEEEECTTCCSSCCSEEESCTTTCCE
T ss_pred HHHHHHHHcC--C--------EEEECCccEEEeCceEEC---CCcEEEEeeCCCCEEEeCCCCCCCCceeeeeeeecccc
Confidence 5699999963 2 69999999984 57774 38999998866666653211
Q ss_pred -------ccCC----cc-------cccceeEEE-EcCCeEEEeeEEeeCCCCc------------ccceeeEecCCCceE
Q 008485 321 -------VVDG----WT-------TFNSATFAV-VAPKFVAVNITIRNTAGAI------------KHQAVALRNGADLST 369 (564)
Q Consensus 321 -------~~~g----~~-------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~------------~~qAvAl~~~~d~~~ 369 (564)
..|| ++ ..+...|.+ ..+++.++||+|+|+.... ..+.+.+.+.+..+.
T Consensus 107 NItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S~NV~ 186 (609)
T 3gq8_A 107 NIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIW 186 (609)
T ss_dssp EEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEE
T ss_pred cEEEEeeEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccceeEE
Confidence 0112 00 011112223 3467899999999985410 000111112246799
Q ss_pred EEeCccccc-cceEeecCcce-eeeccEEEec------cceeeec--ceeEeeeeeeeeeCCCCCCce-eEEecCCCCCC
Q 008485 370 FYSCSFEAY-QDTLYTHSLRQ-FYRECDIYGT------VDFIFGN--AAVVLQNCNIYPRLPMSGQFN-AITAQGRTDPN 438 (564)
Q Consensus 370 f~~C~~~g~-QDTL~~~~~r~-~~~~C~I~G~------vDFIfG~--~~a~f~~c~i~~~~~~~~~~~-~itA~gr~~~~ 438 (564)
++||.|.+. -|-+.+++.+. .+++|++.|. --+-+|. ..+.|+||.+... ..| .|-++++ ..
T Consensus 187 I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt-----~~GIrIKt~~~--~~ 259 (609)
T 3gq8_A 187 IENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGC-----YGGIEIKAHGD--AP 259 (609)
T ss_dssp EESCEEESCSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESS-----SEEEEEEECTT--SC
T ss_pred EEeeEEEecCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECC-----CCEEEEEecCC--CC
Confidence 999999764 46666665444 7899999543 3344454 3678999998631 112 2444332 23
Q ss_pred CCceEEEEccEEe
Q 008485 439 QNTGTSIHNCTIR 451 (564)
Q Consensus 439 ~~~G~vf~~c~i~ 451 (564)
......|.+|...
T Consensus 260 ~v~NV~I~n~vs~ 272 (609)
T 3gq8_A 260 AAYNISINGHMSV 272 (609)
T ss_dssp CCEEEEEEEEEEE
T ss_pred ccccEEEECCEee
Confidence 4456666666544
No 16
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.27 E-value=0.0035 Score=65.28 Aligned_cols=203 Identities=15% Similarity=0.187 Sum_probs=111.2
Q ss_pred CcccHHHHHHhCCCCCCCCCceEEEEEcCcEEeeeEEEEecCcceEEeecCC------------------cceEEecc-c
Q 008485 259 NFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGI------------------NQTVITGN-R 319 (564)
Q Consensus 259 ~f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~Itl~G~g~------------------~~tiI~~~-~ 319 (564)
+...||+|++++... +..+|+|.+|+|..--.+ +.+++|..+|. +.+.|+|. .
T Consensus 7 ~t~aiq~ai~~c~~~-----gg~~v~vP~G~~l~l~~l---~~~~~l~~~g~~~~~~~~w~~g~~i~~~~~ni~I~G~~~ 78 (349)
T 1hg8_A 7 EYSGLATAVSSCKNI-----VLNGFQVPTGKQLDLSSL---QNDSTVTFKGTTTFATTADNDFNPIVISGSNITITGASG 78 (349)
T ss_dssp SGGGHHHHHHHCSEE-----EECCCEECTTCCEEETTC---CTTCEEEECSEEEECCCCCTTCCSEEEEEESCEEEECTT
T ss_pred CHHHHHHHHHhcccc-----CCCEEEECCCEEEEeecc---CCCeEEEEcCceecccccccCCceEEEECccEEEEecCC
Confidence 356799999998762 124788999988641011 11233333220 12333442 1
Q ss_pred cccCCcc------------c-ccceeEEE-E--cCCeEEEeeEEeeCCCCcccceeeEec-CCCceEEEeCccccc----
Q 008485 320 SVVDGWT------------T-FNSATFAV-V--APKFVAVNITIRNTAGAIKHQAVALRN-GADLSTFYSCSFEAY---- 378 (564)
Q Consensus 320 ~~~~g~~------------t-~~sat~~v-~--~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~f~~C~~~g~---- 378 (564)
...||.+ . .+...|.+ . .+++.+++|+|+|+.. . .+.+ .++++.+.++.+.+.
T Consensus 79 G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~----~--~i~i~~~~nv~i~~~~I~~~~~~~ 152 (349)
T 1hg8_A 79 HVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPV----H--CFDITGSSQLTISGLILDNRAGDK 152 (349)
T ss_dssp CEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSS----E--EEEEESCEEEEEEEEEEECGGGSS
T ss_pred CEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCC----c--eEEEeccCCEEEEEEEEECCCCcc
Confidence 1112211 1 23335666 5 4589999999999842 2 3433 578899999999864
Q ss_pred -------------cceEeecCc-ceeeeccEEEecccee-ee-cceeEeeeeeeeeeCCCCCCceeEEe--cCCCCCCCC
Q 008485 379 -------------QDTLYTHSL-RQFYRECDIYGTVDFI-FG-NAAVVLQNCNIYPRLPMSGQFNAITA--QGRTDPNQN 440 (564)
Q Consensus 379 -------------QDTL~~~~~-r~~~~~C~I~G~vDFI-fG-~~~a~f~~c~i~~~~~~~~~~~~itA--~gr~~~~~~ 440 (564)
-|.+.+.+. .-..++|+|...-|-| ++ ....+|++|.+.. + .| |.. -|......-
T Consensus 153 ~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~-----g-hG-isiGS~G~~~~~~v 225 (349)
T 1hg8_A 153 PNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSGTNIVVSNMYCSG-----G-HG-LSIGSVGGKSDNVV 225 (349)
T ss_dssp CCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESSEEEEEEEEEEEES-----S-CC-EEEEEESSSSCCEE
T ss_pred ccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeCCeEEEEEeEEEeC-----C-cc-eEEccccccccCCE
Confidence 344555433 3468899997544533 22 2456889998863 1 13 333 122223344
Q ss_pred ceEEEEccEEeecCCCCCCCCcceEEeeccccCcCcEEEeccCCCCc
Q 008485 441 TGTSIHNCTIRASSDLASGSQTVQTYLGRPWKEYSRTVYMQSFMDSS 487 (564)
Q Consensus 441 ~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~s~i~~~ 487 (564)
..+.|+||+|.....- ...++.-|| .+....+.|-+-.|.++
T Consensus 226 ~nV~v~n~~~~~~~~G----irIKt~~g~-~G~v~nI~~~ni~~~~v 267 (349)
T 1hg8_A 226 DGVQFLSSQVVNSQNG----CRIKSNSGA-TGTINNVTYQNIALTNI 267 (349)
T ss_dssp EEEEEEEEEEEEEEEE----EEEEEETTC-CEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEECCCcE----EEEEecCCC-CccccceEEEEEEEEcc
Confidence 5788999999876420 011222222 12245666666666543
No 17
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.26 E-value=0.0053 Score=63.85 Aligned_cols=100 Identities=11% Similarity=0.109 Sum_probs=68.0
Q ss_pred ccHHHHHHhCCCCCCCCCceEEEEEcCcEEe--eeEEEEecCcceEEeecCCcceEEeccccccCCcccccceeEE-EEc
Q 008485 261 TTITDAINVAPNNTDVTNGYFLIYITAGVYE--EYISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSATFA-VVA 337 (564)
Q Consensus 261 ~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~--E~v~I~~~~~~Itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~-v~~ 337 (564)
-|+++||.+..+. .+|+...|+++ +.|.|. +++||.|.|. ..+|.|.. .-+. ..+
T Consensus 56 GsLr~av~~~~P~-------~Ivf~~~g~I~l~~~l~V~---sn~TI~G~ga-~~~i~G~G-----------~gi~i~~a 113 (346)
T 1pxz_A 56 GTLRYGATREKAL-------WIIFSQNMNIKLKMPLYVA---GHKTIDGRGA-DVHLGNGG-----------PCLFMRKV 113 (346)
T ss_dssp TSHHHHHHCSSCE-------EEEESSCEEECCSSCEECC---SSEEEECTTS-CEEEETTS-----------CCEEEESC
T ss_pred chhHHHhccCCCe-------EEEEcCCcEEecCccEEec---CCeEEEccCC-ceEEeCCc-----------ceEEEEcc
Confidence 4799999985443 67777889997 567774 3899999885 45666521 2223 357
Q ss_pred CCeEEEeeEEeeCCCC------------------cccceeeEecCCCceEEEeCccccccceEe
Q 008485 338 PKFVAVNITIRNTAGA------------------IKHQAVALRNGADLSTFYSCSFEAYQDTLY 383 (564)
Q Consensus 338 ~~f~~~~lt~~Nt~g~------------------~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~ 383 (564)
++++++||+|++.... ....|+-+. .+.++.+++|.|....|-|+
T Consensus 114 ~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~-~s~nVwIDHcs~s~~~Dg~i 176 (346)
T 1pxz_A 114 SHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR-NVTNAWIDHNSLSDCSDGLI 176 (346)
T ss_dssp EEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE-SCEEEEEESCEEECCSSEEE
T ss_pred CCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEe-cCceEEEEeeEEecCCCCcE
Confidence 8999999999986311 122334443 46778888888887766654
No 18
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=97.25 E-value=0.0028 Score=65.66 Aligned_cols=201 Identities=15% Similarity=0.146 Sum_probs=110.5
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEcCcEEeeeE-EEEecCcceEEeecCC-----------------cceEEeccc-c
Q 008485 260 FTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYI-SISKNKKNLMIIGDGI-----------------NQTVITGNR-S 320 (564)
Q Consensus 260 f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E~v-~I~~~~~~Itl~G~g~-----------------~~tiI~~~~-~ 320 (564)
...||+|++++... +..+|+|.+|+|.. + .+ +.+++|.++|. +.+.|+|.. .
T Consensus 8 t~aiq~ai~~c~~~-----~g~~v~vP~G~~~~-l~~l---~~~~~l~~~g~~~~~~~~w~g~~i~~~~~nv~I~G~~gG 78 (339)
T 2iq7_A 8 AAAAIKGKASCTSI-----ILNGIVVPAGTTLD-MTGL---KSGTTVTFQGKTTFGYKEWEGPLISFSGTNININGASGH 78 (339)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-ECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTC
T ss_pred HHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeCcEEcccccccCcEEEEEcccEEEEcCCCC
Confidence 45799999998762 12578899999863 2 11 12344443320 123334321 1
Q ss_pred ccCCcc------------cccceeEEE-EcCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccc---------
Q 008485 321 VVDGWT------------TFNSATFAV-VAPKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAY--------- 378 (564)
Q Consensus 321 ~~~g~~------------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~--------- 378 (564)
..||.+ ..+...|.+ ..+++.++||+|+|+.. ..+-+ ...+++.+.+|.+.+.
T Consensus 79 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~----~~i~i-~~~~nv~i~~~~I~~~~~d~~~~~n 153 (339)
T 2iq7_A 79 SIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPV----QAFSI-NSATTLGVYDVIIDNSAGDSAGGHN 153 (339)
T ss_dssp EEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSS----CCEEE-ESCEEEEEESCEEECGGGGGTTCCS
T ss_pred EEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCc----ceEEE-eccCCEEEEEEEEECCccccccCCC
Confidence 112211 112234555 57889999999999843 22333 2578899999999865
Q ss_pred cceEeecCc-ceeeeccEEEecccee-eec-ceeEeeeeeeeeeCCCCCCceeEEe--cCCCCCCCCceEEEEccEEeec
Q 008485 379 QDTLYTHSL-RQFYRECDIYGTVDFI-FGN-AAVVLQNCNIYPRLPMSGQFNAITA--QGRTDPNQNTGTSIHNCTIRAS 453 (564)
Q Consensus 379 QDTL~~~~~-r~~~~~C~I~G~vDFI-fG~-~~a~f~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~~ 453 (564)
-|.+..... .-..++|+|...-|=| ++. ...+++||.+.. + .| |.. -|......-..+.|+||+|...
T Consensus 154 tDGid~~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~-----g-hG-isiGSlg~~~~~~v~nV~v~n~~~~~~ 226 (339)
T 2iq7_A 154 TDAFDVGSSTGVYISGANVKNQDDCLAINSGTNITFTGGTCSG-----G-HG-LSIGSVGGRSDNTVKTVTISNSKIVNS 226 (339)
T ss_dssp CCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEES-----S-CC-EEEEEESSSSCCEEEEEEEEEEEEESC
T ss_pred CCcEEEcCcceEEEEecEEecCCCEEEEcCCccEEEEeEEEEC-----C-ce-EEECcCCcccCCCEEEEEEEeeEEECC
Confidence 344555443 3467888887544432 222 456788888763 1 12 332 1222233445688999999875
Q ss_pred CCCCCCCCcceEEeeccccCcCcEEEeccCCCC
Q 008485 454 SDLASGSQTVQTYLGRPWKEYSRTVYMQSFMDS 486 (564)
Q Consensus 454 ~~~~~~~~~~~~yLGRpW~~~sr~v~~~s~i~~ 486 (564)
..- ...+++-||+ +....+.|-+-.|.+
T Consensus 227 ~~g----irIkt~~g~~-G~v~nI~~~ni~~~~ 254 (339)
T 2iq7_A 227 DNG----VRIKTVSGAT-GSVSGVTYSGITLSN 254 (339)
T ss_dssp SEE----EEEEEETTCC-CEEEEEEEEEEEEEE
T ss_pred CcE----EEEEEeCCCC-eEEEEEEEEeEEccC
Confidence 410 1122332331 223566666666654
No 19
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=97.20 E-value=0.0089 Score=67.39 Aligned_cols=145 Identities=17% Similarity=0.195 Sum_probs=88.0
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEcCcEEee--eEEEEecCcceEEeecCCcceEEecccc-----------------
Q 008485 260 FTTITDAINVAPNNTDVTNGYFLIYITAGVYEE--YISISKNKKNLMIIGDGINQTVITGNRS----------------- 320 (564)
Q Consensus 260 f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E--~v~I~~~~~~Itl~G~g~~~tiI~~~~~----------------- 320 (564)
-.-||+||++. + +|+|.+|+|.- .|.++ .+++|.|++...++|.....
T Consensus 39 T~Aiq~Ai~aG--g--------~V~IPaGtYlisg~I~L~---snv~L~Geg~~~t~Lk~~~d~p~~~~li~~lI~a~gv 105 (772)
T 3gqn_A 39 IRAFEKAIESG--F--------PVYVPYGTFMVSRGIKLP---SNTVLTGAGKRNAVIRFMDSVGRGESLMYNENVTTGN 105 (772)
T ss_dssp HHHHHHHHHTT--S--------CEEECSEEEEESSCEEEC---SSCEEEEEEEEEEEEEECTTCCSSCCSEEESCTTTCC
T ss_pred HHHHHHHHHcC--C--------EEEECCccEEEEeEEEEC---CCcEEEEecCCCCEEEeCCCCCCCCceeeeeeeccCc
Confidence 35699999963 2 69999999985 47774 37888888755455543211
Q ss_pred --------ccCCc----c-------cccceeEEE-EcCCeEEEeeEEeeCCCC-------c-----ccceeeEecCCCce
Q 008485 321 --------VVDGW----T-------TFNSATFAV-VAPKFVAVNITIRNTAGA-------I-----KHQAVALRNGADLS 368 (564)
Q Consensus 321 --------~~~g~----~-------t~~sat~~v-~~~~f~~~~lt~~Nt~g~-------~-----~~qAvAl~~~~d~~ 368 (564)
..||- + ..+...|.+ ..+++.++||+|+|+... . ..+.+.+.+.+.++
T Consensus 106 eNItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~NV 185 (772)
T 3gqn_A 106 ENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENI 185 (772)
T ss_dssp EEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEE
T ss_pred eeEEEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccceE
Confidence 01120 0 011122333 346789999999998541 0 00111122224779
Q ss_pred EEEeCcccccc-ceEeecCcce-eeeccEEEec------cceeeec--ceeEeeeeeee
Q 008485 369 TFYSCSFEAYQ-DTLYTHSLRQ-FYRECDIYGT------VDFIFGN--AAVVLQNCNIY 417 (564)
Q Consensus 369 ~f~~C~~~g~Q-DTL~~~~~r~-~~~~C~I~G~------vDFIfG~--~~a~f~~c~i~ 417 (564)
.++||.|.+.+ |-+.+++... .+++|++.|. --+-+|. ..+.++||.+.
T Consensus 186 ~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~ 244 (772)
T 3gqn_A 186 WIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSK 244 (772)
T ss_dssp EEESCEEESCSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEE
T ss_pred EEEeeEEEecCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEE
Confidence 99999997754 5566665444 7899999543 3444454 36789999986
No 20
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.17 E-value=0.0069 Score=65.16 Aligned_cols=142 Identities=7% Similarity=0.045 Sum_probs=88.6
Q ss_pred eEEE-EcCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCcccc---ccceEeecCc-ceeeeccEEEecccee-ee
Q 008485 332 TFAV-VAPKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEA---YQDTLYTHSL-RQFYRECDIYGTVDFI-FG 405 (564)
Q Consensus 332 t~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g---~QDTL~~~~~-r~~~~~C~I~G~vDFI-fG 405 (564)
.+.+ ...++.+++|+|+|+..- .+-+ ..++.+.+.++.+.+ +-|.+-+.+. ....++|+|...-|=| +.
T Consensus 192 ~i~~~~~~nv~i~giti~nsp~~----~i~~-~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaik 266 (448)
T 3jur_A 192 FVQFYRCRNVLVEGVKIINSPMW----CIHP-VLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIK 266 (448)
T ss_dssp SEEEESCEEEEEESCEEESCSSC----SEEE-ESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEESSEEEEEB
T ss_pred EEEEEcccceEEEeeEEEeCCCc----eEee-eccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeCCCcEEec
Confidence 3444 467899999999998431 1222 357889999999986 5677777654 3478899998666643 22
Q ss_pred -------------cceeEeeeeeeeeeCCCCCCceeEEecCCCCCCCCceEEEEccEEeecCCCCCCCCcceEEeecccc
Q 008485 406 -------------NAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRASSDLASGSQTVQTYLGRPWK 472 (564)
Q Consensus 406 -------------~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~ 472 (564)
....+++||.+.... + .+.|.. |......-..+.|+||++.+...- ...++.-||. +
T Consensus 267 sg~~~dg~~~~~ps~nI~I~n~~~~~~~---g-h~gisi-GS~~~~~v~nV~v~n~~~~~t~~G----irIKt~~g~g-G 336 (448)
T 3jur_A 267 SGRDADGRRIGVPSEYILVRDNLVISQA---S-HGGLVI-GSEMSGGVRNVVARNNVYMNVERA----LRLKTNSRRG-G 336 (448)
T ss_dssp CCCHHHHHHHCCCEEEEEEESCEEECSS---C-SEEEEE-CSSCTTCEEEEEEESCEEESCSEE----EEEECCTTTC-S
T ss_pred cCccccccccCCCceeEEEEEeEEecCC---C-cceEEE-CCcccCcEEEEEEEEEEEecccce----EEEEEEcCCC-c
Confidence 235688999985321 2 234554 444344456789999999765310 0112333443 3
Q ss_pred CcCcEEEeccCCCCcc
Q 008485 473 EYSRTVYMQSFMDSSI 488 (564)
Q Consensus 473 ~~sr~v~~~s~i~~~I 488 (564)
....+.|-+..|.+.-
T Consensus 337 ~v~nI~f~ni~m~~v~ 352 (448)
T 3jur_A 337 YMENIFFIDNVAVNVS 352 (448)
T ss_dssp EEEEEEEESCEEEEES
T ss_pred eEeeEEEEEEEEECCc
Confidence 3456777777776543
No 21
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=97.10 E-value=0.0054 Score=65.45 Aligned_cols=172 Identities=14% Similarity=0.181 Sum_probs=98.3
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEcCcEEee--eEEEEecCcceEEeecCCc-------c---eEEeccc--------
Q 008485 260 FTTITDAINVAPNNTDVTNGYFLIYITAGVYEE--YISISKNKKNLMIIGDGIN-------Q---TVITGNR-------- 319 (564)
Q Consensus 260 f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E--~v~I~~~~~~Itl~G~g~~-------~---tiI~~~~-------- 319 (564)
=..||+||+++..+ .+|+|.+|+|.- .|.+.. ..+++|..+|.- . .++....
T Consensus 37 T~Aiq~Ai~ac~~g-------~~V~vP~G~Yli~~~l~l~g-~s~v~l~l~G~~l~~~~~~~~~~~~~~~~~~~~i~i~G 108 (422)
T 1rmg_A 37 GPAITSAWAACKSG-------GLVYIPSGNYALNTWVTLTG-GSATAIQLDGIIYRTGTASGNMIAVTDTTDFELFSSTS 108 (422)
T ss_dssp HHHHHHHHHHHTBT-------CEEEECSSEEEECSCEEEES-CEEEEEEECSEEEECCCCSSEEEEEEEEEEEEEECSSS
T ss_pred HHHHHHHHHHCCCC-------CEEEECCCeEEeCCceeecC-CCeEEEEEcCcEEcccCCCCceEEEEecCceeEEeecc
Confidence 35799999988644 489999999985 277652 246777665510 0 0011110
Q ss_pred -cccCCcc-------cccceeEEE-EcCCeEEEeeEEeeCCCCcccceeeEec-CCCceEEEeCcccc----ccceEeec
Q 008485 320 -SVVDGWT-------TFNSATFAV-VAPKFVAVNITIRNTAGAIKHQAVALRN-GADLSTFYSCSFEA----YQDTLYTH 385 (564)
Q Consensus 320 -~~~~g~~-------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~f~~C~~~g----~QDTL~~~ 385 (564)
...||.+ .++...+.+ ..+++.++||+|+|+.. . .+.+ .++++.++||.|.+ .-|.+.+.
T Consensus 109 ~G~IdG~G~~~w~~~~~rp~~i~~~~~~nv~I~~iti~nsp~----~--~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~ 182 (422)
T 1rmg_A 109 KGAVQGFGYVYHAEGTYGARILRLTDVTHFSVHDIILVDAPA----F--HFTMDTCSDGEVYNMAIRGGNEGGLDGIDVW 182 (422)
T ss_dssp CCEEECCTHHHHTTTCCCCEEEEEEEEEEEEEEEEEEECCSS----C--SEEEEEEEEEEEEEEEEECCSSTTCCSEEEE
T ss_pred CEEEECCcchhhcCCCCCceEEEEcccceEEEECeEEECCCc----e--EEEEeCcCCEEEEeEEEECCCCCCCccEeec
Confidence 0111211 113344444 47889999999999742 2 2333 45778888888876 45666666
Q ss_pred CcceeeeccEEEeccceee---ecceeEeeeeeeeeeCCCCCCceeEEe--cCCCCCCCCceEEEEccEEeecC
Q 008485 386 SLRQFYRECDIYGTVDFIF---GNAAVVLQNCNIYPRLPMSGQFNAITA--QGRTDPNQNTGTSIHNCTIRASS 454 (564)
Q Consensus 386 ~~r~~~~~C~I~G~vDFIf---G~~~a~f~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~~~ 454 (564)
...-..++|+|...-|=|. |....+++||.+.. + .| |.. .|+. ..-..+.|+||++....
T Consensus 183 ~~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~-----~-~G-isIGS~g~~--~~v~nV~v~n~~~~~~~ 247 (422)
T 1rmg_A 183 GSNIWVHDVEVTNKDECVTVKSPANNILVESIYCNW-----S-GG-CAMGSLGAD--TDVTDIVYRNVYTWSSN 247 (422)
T ss_dssp EEEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEES-----S-SE-EEEEEECTT--EEEEEEEEEEEEEESSS
T ss_pred CCeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcC-----C-cc-eeecccCCC--CcEEEEEEEeEEEeccc
Confidence 5223567888875545332 34567788888542 1 12 222 1211 12234678888877654
No 22
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=97.01 E-value=0.0082 Score=64.77 Aligned_cols=178 Identities=14% Similarity=0.091 Sum_probs=94.9
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEcCcEEe-eeEEEEecCcceEEeecC-------------------------Ccce
Q 008485 260 FTTITDAINVAPNNTDVTNGYFLIYITAGVYE-EYISISKNKKNLMIIGDG-------------------------INQT 313 (564)
Q Consensus 260 f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~-E~v~I~~~~~~Itl~G~g-------------------------~~~t 313 (564)
=..||+||+++... .+.-+|+|.+|+|. ..|.++ .+++|..++ .+..
T Consensus 39 T~Aiq~Aidac~~~----~ggg~V~vP~GtYl~g~I~lk---s~v~L~l~~GatL~~s~~td~~~y~~~~~~~~~~~~nI 111 (464)
T 1h80_A 39 SNALQRAINAISRK----PNGGTLLIPNGTYHFLGIQMK---SNVHIRVESDVIIKPTWNGDGKNHRLFEVGVNNIVRNF 111 (464)
T ss_dssp HHHHHHHHHHHHTS----TTCEEEEECSSEEEECSEECC---TTEEEEECTTCEEEECCCTTCSCEEEEEESSSSCEEEE
T ss_pred HHHHHHHHHHHhhc----cCCcEEEECCCeEEEeeEecc---CceEEEEcCCcEEEeccCCCcccCCceEeecccCccce
Confidence 45799999988431 01268999999995 234442 245554432 1111
Q ss_pred EEecccc--ccCCccc--ccceeEEE-EcCCeEEEeeEEeeCCCCcccceee--------EecCCCceEEEeCccccccc
Q 008485 314 VITGNRS--VVDGWTT--FNSATFAV-VAPKFVAVNITIRNTAGAIKHQAVA--------LRNGADLSTFYSCSFEAYQD 380 (564)
Q Consensus 314 iI~~~~~--~~~g~~t--~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvA--------l~~~~d~~~f~~C~~~g~QD 380 (564)
.|+|... ..||.+. .+...|.+ ...++.++||+|+|... -+...- +.+.+..+.+.||.|.+.-|
T Consensus 112 tI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~--ih~s~~V~i~NtDGi~i~s~nV~I~n~~I~~gdd 189 (464)
T 1h80_A 112 SFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKT--IFASILVDVTERNGRLHWSRNGIIERIKQNNALF 189 (464)
T ss_dssp EEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSC--BSCSEEECEEEETTEEEEEEEEEEEEEEEESCCT
T ss_pred EEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccce--EeeceeeeeecCCCceeeccCEEEeceEEecCCC
Confidence 2232210 0111110 11122333 35779999999999543 121111 13356778899999998877
Q ss_pred eEe-e--cCc-ceeeeccEEEec-------cceeee------cceeEeeeeeeeeeCCCCCCceeEEecCCCCCCCCceE
Q 008485 381 TLY-T--HSL-RQFYRECDIYGT-------VDFIFG------NAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGT 443 (564)
Q Consensus 381 TL~-~--~~~-r~~~~~C~I~G~-------vDFIfG------~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~ 443 (564)
++- . ... .-.+++|++.|. -|.-+| -....|+||.+.... +.|..... ......+
T Consensus 190 giGs~~~~~~~NV~V~n~~~~gg~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~------~~I~I~p~--~~~isnI 261 (464)
T 1h80_A 190 GYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGL------AAVMFGPH--FMKNGDV 261 (464)
T ss_dssp TCEEEEESEEEEEEEEEEEEESSEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSS------EEEEEECT--TCBCCCE
T ss_pred eEEecccCCEeEEEEEeeEEECCCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCc------eeEEEeCC--CceEeEE
Confidence 664 1 112 337889997761 111011 123478888886422 22333211 1233568
Q ss_pred EEEccEEeecC
Q 008485 444 SIHNCTIRASS 454 (564)
Q Consensus 444 vf~~c~i~~~~ 454 (564)
.|+|.+.+...
T Consensus 262 tfeNI~~t~~~ 272 (464)
T 1h80_A 262 QVTNVSSVSCG 272 (464)
T ss_dssp EEEEEEEESSS
T ss_pred EEEEEEEEccc
Confidence 88888887643
No 23
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=97.01 E-value=0.0066 Score=62.86 Aligned_cols=201 Identities=14% Similarity=0.179 Sum_probs=110.8
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEcCcEEeeeE-EEEecCcceEEeecCC-----------------cceEEeccc-c
Q 008485 260 FTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYI-SISKNKKNLMIIGDGI-----------------NQTVITGNR-S 320 (564)
Q Consensus 260 f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E~v-~I~~~~~~Itl~G~g~-----------------~~tiI~~~~-~ 320 (564)
+..||+|++++... +..+|+|.+|+|.. + .+ +.+++|.++|. +.+.|+|.. .
T Consensus 12 ~~aiq~ai~~c~~~-----gg~~v~vP~G~~l~-l~~l---~~~~~l~~~g~~~~~~~~w~g~li~~~~~nv~I~G~~gG 82 (339)
T 1ia5_A 12 ASSASKSKTSCSTI-----VLSNVAVPSGTTLD-LTKL---NDGTHVIFSGETTFGYKEWSGPLISVSGSDLTITGASGH 82 (339)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-ECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTC
T ss_pred hHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeCcEEcccccccCcEEEEEcCcEEEEcCCCe
Confidence 56799999999762 22578999999863 2 11 22444444331 122333321 1
Q ss_pred ccCCcc------------cccceeEEE-EcCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccc---------
Q 008485 321 VVDGWT------------TFNSATFAV-VAPKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAY--------- 378 (564)
Q Consensus 321 ~~~g~~------------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~--------- 378 (564)
..||.+ ..+...|.+ ..+++.++||+|+|+.. ..+-+ ...+++.+.+|.+.+.
T Consensus 83 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i-~~~~nv~i~~~~I~~~~~d~~~~~n 157 (339)
T 1ia5_A 83 SINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPV----QVFSV-AGSDYLTLKDITIDNSDGDDNGGHN 157 (339)
T ss_dssp EEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEE-ESCEEEEEESCEEECGGGTTTTCCS
T ss_pred EEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCc----ceEEE-ecccCeEEeeEEEECCccccccCCC
Confidence 112211 112234555 57889999999999843 22333 2578899999998864
Q ss_pred cceEeecCc-ceeeeccEEEecccee-eec-ceeEeeeeeeeeeCCCCCCceeEEe--cCCCCCCCCceEEEEccEEeec
Q 008485 379 QDTLYTHSL-RQFYRECDIYGTVDFI-FGN-AAVVLQNCNIYPRLPMSGQFNAITA--QGRTDPNQNTGTSIHNCTIRAS 453 (564)
Q Consensus 379 QDTL~~~~~-r~~~~~C~I~G~vDFI-fG~-~~a~f~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~~ 453 (564)
-|.+.+.+. .-..++|+|.-.-|=| ++. ...+|+||.+.. + .| |.. -|......-..+.|+||+|...
T Consensus 158 tDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~-----g-hG-isiGS~g~~~~~~v~nV~v~n~~~~~t 230 (339)
T 1ia5_A 158 TDAFDIGTSTYVTISGATVYNQDDCVAVNSGENIYFSGGYCSG-----G-HG-LSIGSVGGRSDNTVKNVTFVDSTIINS 230 (339)
T ss_dssp CCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEES-----S-SC-EEEEEECSSSCCEEEEEEEEEEEEESC
T ss_pred CCcEEecCCceEEEEeeEEEcCCCeEEEeCCeEEEEEeEEEEC-----C-ce-EEECcCCcccCCCEEEEEEEeeEEECC
Confidence 344655543 3467888887544532 222 456788888763 1 12 333 1212223345678999999875
Q ss_pred CCCCCCCCcceEEeeccccCcCcEEEeccCCCC
Q 008485 454 SDLASGSQTVQTYLGRPWKEYSRTVYMQSFMDS 486 (564)
Q Consensus 454 ~~~~~~~~~~~~yLGRpW~~~sr~v~~~s~i~~ 486 (564)
..- ...+++-||+ +....+.|-+-.|.+
T Consensus 231 ~~g----irIKt~~g~~-G~v~nI~~~ni~~~~ 258 (339)
T 1ia5_A 231 DNG----VRIKTNIDTT-GSVSDVTYKDITLTS 258 (339)
T ss_dssp SEE----EEEEEETTCC-CEEEEEEEEEEEEEE
T ss_pred CcE----EEEEEeCCCC-cEEEeeEEEEEEEEC
Confidence 410 1122322331 223456666666654
No 24
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.00 E-value=0.0044 Score=64.14 Aligned_cols=201 Identities=15% Similarity=0.164 Sum_probs=112.1
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEcCcEEeeeE-EEEecCcceEEeecC-----------------CcceEEeccc-c
Q 008485 260 FTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYI-SISKNKKNLMIIGDG-----------------INQTVITGNR-S 320 (564)
Q Consensus 260 f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E~v-~I~~~~~~Itl~G~g-----------------~~~tiI~~~~-~ 320 (564)
...||+|++++... +.-+|+|.+|+|.. + .+ +.+++|.++| .+.+.|+|.. .
T Consensus 8 t~aiq~ai~~c~~~-----gg~~v~vP~G~~~~-l~~l---~~~~~l~~~g~~~~~~~~w~g~li~~~~~nv~I~G~~gG 78 (336)
T 1nhc_A 8 ASEASESISSCSDV-----VLSSIEVPAGETLD-LSDA---ADGSTITFEGTTSFGYKEWKGPLIRFGGKDLTVTMADGA 78 (336)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-CTTC---CTTCEEEEESEEEECCCCSCCCSEECCEESCEEEECTTC
T ss_pred HHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeceEEcccccccCcEEEEecCCEEEEcCCCe
Confidence 45699999998652 12578889998863 2 11 1234444332 0223344431 1
Q ss_pred ccCCcc------------cccceeEEE-EcCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccc---------
Q 008485 321 VVDGWT------------TFNSATFAV-VAPKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAY--------- 378 (564)
Q Consensus 321 ~~~g~~------------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~--------- 378 (564)
..||.+ ..+...|.+ ..+++.++||+|+|+.. ..+-+. ++.+.+.+|.+.+.
T Consensus 79 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i~--~~nv~i~~~~I~~~~~d~~~~~n 152 (336)
T 1nhc_A 79 VIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPV----QAISVQ--ATNVHLNDFTIDNSDGDDNGGHN 152 (336)
T ss_dssp EEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEEE--EEEEEEESCEEECTTHHHHTCCS
T ss_pred EEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCc----cEEEEE--eCCEEEEEEEEECCCcccccCCC
Confidence 112211 112224555 57889999999999842 335554 88899999999874
Q ss_pred cceEeecCc-ceeeeccEEEecccee-eec-ceeEeeeeeeeeeCCCCCCceeEEe--cCCCCCCCCceEEEEccEEeec
Q 008485 379 QDTLYTHSL-RQFYRECDIYGTVDFI-FGN-AAVVLQNCNIYPRLPMSGQFNAITA--QGRTDPNQNTGTSIHNCTIRAS 453 (564)
Q Consensus 379 QDTL~~~~~-r~~~~~C~I~G~vDFI-fG~-~~a~f~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~~ 453 (564)
-|.+.+.+. .-..++|+|...-|=| ++. ...+++||.+.. + .| |.. .|......-..+.|+||++...
T Consensus 153 tDGidi~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~-----g-hG-isiGS~g~~~~~~v~nV~v~n~~~~~t 225 (336)
T 1nhc_A 153 TDGFDISESTGVYISGATVKNQDDCIAINSGESISFTGGTCSG-----G-HG-LSIGSVGGRDDNTVKNVTISDSTVSNS 225 (336)
T ss_dssp CCSEEECSCEEEEEESCEEESSSEEEEESSEEEEEEESCEEES-----S-SE-EEEEEESSSSCCEEEEEEEEEEEEESC
T ss_pred CCcEEecCCCeEEEEeCEEEcCCCEEEEeCCeEEEEEeEEEEC-----C-cC-ceEccCccccCCCEEEEEEEeeEEECC
Confidence 455666543 3478899997544432 222 456788888763 1 23 333 1212223445788999999875
Q ss_pred CCCCCCCCcceEEeeccccCcCcEEEeccCCCCc
Q 008485 454 SDLASGSQTVQTYLGRPWKEYSRTVYMQSFMDSS 487 (564)
Q Consensus 454 ~~~~~~~~~~~~yLGRpW~~~sr~v~~~s~i~~~ 487 (564)
..- ...++.-|| -+....+.|-+-.|.++
T Consensus 226 ~~g----irIkt~~g~-~G~v~nI~~~ni~~~~v 254 (336)
T 1nhc_A 226 ANG----VRIKTIYKE-TGDVSEITYSNIQLSGI 254 (336)
T ss_dssp SEE----EEEEEETTC-CCEEEEEEEEEEEEEEE
T ss_pred CcE----EEEEEECCC-CCEEeeeEEeeEEeecc
Confidence 410 011222232 12245666666666543
No 25
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=96.95 E-value=0.014 Score=65.22 Aligned_cols=110 Identities=14% Similarity=0.015 Sum_probs=59.6
Q ss_pred EEEE-cCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCcccc----ccceEeecCcc-eeeeccEEEecccee-e-
Q 008485 333 FAVV-APKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEA----YQDTLYTHSLR-QFYRECDIYGTVDFI-F- 404 (564)
Q Consensus 333 ~~v~-~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g----~QDTL~~~~~r-~~~~~C~I~G~vDFI-f- 404 (564)
|.+. .+++.++||+|+|+.. ..+-+ ...+.+.+.++.+.. +-|.+.+.+.+ -..++|+|.-.-|-| +
T Consensus 334 i~~~~~~nv~I~giti~ns~~----~~i~~-~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaik 408 (608)
T 2uvf_A 334 MTLRGVENVYLAGFTVRNPAF----HGIMN-LENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDTGDDCINFA 408 (608)
T ss_dssp EEEESEEEEEEESCEEECCSS----CSEEE-ESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEECSSCSEEEE
T ss_pred EEEEeeeeEEEeCcEEecCCC----CEEEE-ecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEecCCceEEec
Confidence 4443 6779999999999742 11111 245566677776654 34556555433 356677776544433 2
Q ss_pred -e----------cceeEeeeeeeeeeCCCCCCceeEEecCCCCCCCCceEEEEccEEeecC
Q 008485 405 -G----------NAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRASS 454 (564)
Q Consensus 405 -G----------~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~ 454 (564)
| ....+++||.+.. +.|.+. -|+.....-..+.|.||+|.+..
T Consensus 409 sg~~~~g~~~~~s~nI~I~n~~~~~------ghg~~~-iGS~~~~~v~nI~v~n~~~~~t~ 462 (608)
T 2uvf_A 409 AGTGEKAQEQEPMKGAWLFNNYFRM------GHGAIV-TGSHTGAWIEDILAENNVMYLTD 462 (608)
T ss_dssp CCCSGGGGGSCCEEEEEEESCEECS------SSCSEE-EESCCTTCEEEEEEESCEEESCS
T ss_pred CCcCccccccccccCEEEEeEEEeC------CCCeEE-EcccCCCCEEEEEEEeEEEECCC
Confidence 1 2345677776642 122222 23322233345677777777653
No 26
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.93 E-value=0.012 Score=61.49 Aligned_cols=201 Identities=13% Similarity=0.117 Sum_probs=114.2
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEcCcEEeeeEEEEecCcceEEeecCC-----------------cceEEecc-ccc
Q 008485 260 FTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGI-----------------NQTVITGN-RSV 321 (564)
Q Consensus 260 f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~Itl~G~g~-----------------~~tiI~~~-~~~ 321 (564)
+..||+|++++... ...+|+|.+|+|..--.+ +.+++|..+|. +.+.|+|. ...
T Consensus 35 ~~aiq~ai~~c~~~-----~g~~v~vP~G~~l~l~~l---~~~~~l~~~g~~~~~~~~w~g~~i~~~~~nv~I~G~~~g~ 106 (362)
T 1czf_A 35 AAAAKAGKAKCSTI-----TLNNIEVPAGTTLDLTGL---TSGTKVIFEGTTTFQYEEWAGPLISMSGEHITVTGASGHL 106 (362)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEEECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTCE
T ss_pred HHHHHHHHHHhhcc-----CCCEEEECCCEEEEeecc---CCCeEEEEeCcEEeccccCCCcEEEEeCccEEEEcCCCcE
Confidence 56799999999642 225789999998631011 12344443331 22344442 111
Q ss_pred cCCcc-----------cccceeEEE-EcCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccc---------cc
Q 008485 322 VDGWT-----------TFNSATFAV-VAPKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAY---------QD 380 (564)
Q Consensus 322 ~~g~~-----------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~---------QD 380 (564)
.||.+ ..+...+.+ ..+++.++||+++|+.. ..+-+. .+++.+++|.+.+. -|
T Consensus 107 IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~----~~i~i~--~~nv~i~~~~I~~~~~d~~~~~NtD 180 (362)
T 1czf_A 107 INCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPL----MAFSVQ--ANDITFTDVTINNADGDTQGGHNTD 180 (362)
T ss_dssp EECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSS----CCEEEE--CSSEEEESCEEECGGGGTTTCCSCC
T ss_pred EECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCc----cEEEEe--eCCEEEEEEEEECCccccccCCCCC
Confidence 22211 011223444 46789999999999842 335555 88999999999874 45
Q ss_pred eEeecCc-ceeeeccEEEecccee-eec-ceeEeeeeeeeeeCCCCCCceeEEe--cCCCCCCCCceEEEEccEEeecCC
Q 008485 381 TLYTHSL-RQFYRECDIYGTVDFI-FGN-AAVVLQNCNIYPRLPMSGQFNAITA--QGRTDPNQNTGTSIHNCTIRASSD 455 (564)
Q Consensus 381 TL~~~~~-r~~~~~C~I~G~vDFI-fG~-~~a~f~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~~~~ 455 (564)
.+-..+. .-..++|+|...-|=| ++. ...+|+||.+..- .| |.. -|+.+...-..+.|+||+|.....
T Consensus 181 Gidi~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~g------hG-isiGS~G~~~~~~v~nV~v~n~~~~~t~~ 253 (362)
T 1czf_A 181 AFDVGNSVGVNIIKPWVHNQDDCLAVNSGENIWFTGGTCIGG------HG-LSIGSVGDRSNNVVKNVTIEHSTVSNSEN 253 (362)
T ss_dssp SEEECSCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESS------CC-EEEEEECSSSCCEEEEEEEEEEEEEEEEE
T ss_pred ceeecCcceEEEEeeEEecCCCEEEEeCCeEEEEEEEEEeCC------ce-eEEeeccccCCCCEEEEEEEeeEEECCce
Confidence 5555443 3478899998666643 333 4578899988631 13 332 132233344568899999987642
Q ss_pred CCCCCCcceEEeeccccCcCcEEEeccCCCC
Q 008485 456 LASGSQTVQTYLGRPWKEYSRTVYMQSFMDS 486 (564)
Q Consensus 456 ~~~~~~~~~~yLGRpW~~~sr~v~~~s~i~~ 486 (564)
. ...+++-||+ +....+.|-+-.|..
T Consensus 254 G----irIKt~~g~~-G~v~nI~~~ni~~~~ 279 (362)
T 1czf_A 254 A----VRIKTISGAT-GSVSEITYSNIVMSG 279 (362)
T ss_dssp E----EEEEEETTCC-EEEEEEEEEEEEEEE
T ss_pred E----EEEEEeCCCC-ceEeeEEEEeEEEEC
Confidence 1 1123333331 223456666665544
No 27
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=96.92 E-value=0.007 Score=63.24 Aligned_cols=69 Identities=16% Similarity=0.082 Sum_probs=49.5
Q ss_pred eEEE--EcCCeEEEeeEEeeCCCC--cccceeeEecCCCceEEEeCccccccceEeec----CcceeeeccEEEeccc
Q 008485 332 TFAV--VAPKFVAVNITIRNTAGA--IKHQAVALRNGADLSTFYSCSFEAYQDTLYTH----SLRQFYRECDIYGTVD 401 (564)
Q Consensus 332 t~~v--~~~~f~~~~lt~~Nt~g~--~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~~~----~~r~~~~~C~I~G~vD 401 (564)
.|.| .+++++++||+|++.... ....|+-+. .++++.+++|+|....|-++.. +.+--..+|+|.+.-|
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~-~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~ 201 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVD-DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSD 201 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEE-SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCS
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEec-CCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCcc
Confidence 4677 679999999999986432 234566665 5789999999999888877632 2233567888887654
No 28
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=96.81 E-value=0.018 Score=59.94 Aligned_cols=136 Identities=14% Similarity=0.074 Sum_probs=82.3
Q ss_pred cccHHHHHHhCCCCCC-----CCCceEEEEEcCcEE------------------eeeEEEEecCcceEEeecCCcceEEe
Q 008485 260 FTTITDAINVAPNNTD-----VTNGYFLIYITAGVY------------------EEYISISKNKKNLMIIGDGINQTVIT 316 (564)
Q Consensus 260 f~TIq~Ai~aa~~~~~-----~~~~~~~I~I~~G~Y------------------~E~v~I~~~~~~Itl~G~g~~~tiI~ 316 (564)
..++++||+++..+.. ...++.+|.| .|+- ...+.|....+++||+|.+. . |.
T Consensus 26 ~~~L~~al~~~~~~~~g~~~~~~~~p~vi~v-~GtId~~~~~~~~~~~~~~~~~~~~~~i~~~~sn~TI~G~~~--~-~~ 101 (353)
T 1air_A 26 MQDIVNIIDAARLDANGKKVKGGAYPLVITY-TGNEDSLINAAAANICGQWSKDPRGVEIKEFTKGITIIGANG--S-SA 101 (353)
T ss_dssp HHHHHHHHHHTTBCTTSCBCTBCSSCEEEEE-CCCCHHHHHHHHTSGGGSTTSCCCEEEEESBCSCEEEEECTT--C-CB
T ss_pred HHHHHHHHHhhccccccccccCCCceEEEEE-ccEEeccccccccccccccccCCCceEEEecCCCEEEEeccC--C-CC
Confidence 5689999988763211 1345677777 4552 14566653346888888641 1 11
Q ss_pred ccccccCCcccccceeEEE-EcCCeEEEeeEEeeCCCC-cccceeeEecCCCceEEEeCccccccceEee-cCcceeeec
Q 008485 317 GNRSVVDGWTTFNSATFAV-VAPKFVAVNITIRNTAGA-IKHQAVALRNGADLSTFYSCSFEAYQDTLYT-HSLRQFYRE 393 (564)
Q Consensus 317 ~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g~-~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~~-~~~r~~~~~ 393 (564)
| ..|.+ .+++++++||+|++..+. ....|+-+. .++++-+++|.|..-+|.-.. ..+++.|
T Consensus 102 -------g------~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~-~s~nVWIDH~s~s~~~~~~~g~~~~~~~~-- 165 (353)
T 1air_A 102 -------N------FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD-DSPNVWVDHNELFAANHECDGTPDNDTTF-- 165 (353)
T ss_dssp -------S------SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEE-SCCSEEEESCEEECCSCCCTTCGGGCCSS--
T ss_pred -------C------ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEee-CCCcEEEEeeEEecCCccccccccccccc--
Confidence 1 13444 568999999999975321 134555554 679999999999876543221 1122222
Q ss_pred cEEEeccceeeecceeEeeeeeeee
Q 008485 394 CDIYGTVDFIFGNAAVVLQNCNIYP 418 (564)
Q Consensus 394 C~I~G~vDFIfG~~~a~f~~c~i~~ 418 (564)
.|.+|+.-|...+.+++|.|..
T Consensus 166 ---DGl~di~~~s~~VTISnn~f~~ 187 (353)
T 1air_A 166 ---ESAVDIKGASNTVTVSYNYIHG 187 (353)
T ss_dssp ---CCSEEEESSCCEEEEESCEEEE
T ss_pred ---ccceeeecccCcEEEEeeEEcC
Confidence 2556766666667778888763
No 29
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=96.75 E-value=0.0057 Score=63.16 Aligned_cols=129 Identities=17% Similarity=0.192 Sum_probs=81.8
Q ss_pred ccHHHHHHhCCCCCCCCCceEEEEEcCcEEeee---------------EEEEecCcceEEeecCCcceEEeccccccCCc
Q 008485 261 TTITDAINVAPNNTDVTNGYFLIYITAGVYEEY---------------ISISKNKKNLMIIGDGINQTVITGNRSVVDGW 325 (564)
Q Consensus 261 ~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~E~---------------v~I~~~~~~Itl~G~g~~~tiI~~~~~~~~g~ 325 (564)
..+++||+..+.. +|.+|.+ .|++.-. +.|.. .+++||+|... .|.|
T Consensus 24 ~~L~~al~~~~~~-----~p~iI~~-~G~i~~~~~~~~c~~~~~~~~~~~l~v-~sn~TI~G~~a---~i~g-------- 85 (330)
T 2qy1_A 24 EAMQSAIDSYSGS-----GGLVLNY-TGKFDFGTIKDVCAQWKLPAKTVQIKN-KSDVTIKGANG---SAAN-------- 85 (330)
T ss_dssp HHHHHHHHHSCSS-----SCEEEEE-CCBCCGGGCCCGGGSTTSCCCEEEEES-CCSEEEEECTT---CBBS--------
T ss_pred HHHHHHHhccCCC-----CCEEEEE-ccEEecccccccccccccccceeEEEc-CCCeEEECCCc---EEee--------
Confidence 4688999875432 3467776 6776632 23332 45777776542 1221
Q ss_pred ccccceeEEEE--cCCeEEEeeEEeeCCCCcccceeeEec----CCCceEEEeCccccccceEeecCcceeeeccEEEec
Q 008485 326 TTFNSATFAVV--APKFVAVNITIRNTAGAIKHQAVALRN----GADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGT 399 (564)
Q Consensus 326 ~t~~sat~~v~--~~~f~~~~lt~~Nt~g~~~~qAvAl~~----~~d~~~f~~C~~~g~QDTL~~~~~r~~~~~C~I~G~ 399 (564)
.-|.+. +++++++||+|++........|+-+.- .++++-+++|.|..-.|. +...++++| .|.
T Consensus 86 -----~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~-~~~~~~~~~-----Dg~ 154 (330)
T 2qy1_A 86 -----FGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTK-CSGAGDASF-----DGG 154 (330)
T ss_dssp -----SEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCC-CTTCTTCSS-----CCS
T ss_pred -----eeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccc-cccCCccee-----ecc
Confidence 346665 689999999999764322456666664 588999999999633221 223456655 456
Q ss_pred cceeeecceeEeeeeeeee
Q 008485 400 VDFIFGNAAVVLQNCNIYP 418 (564)
Q Consensus 400 vDFIfG~~~a~f~~c~i~~ 418 (564)
+|..-|.....+++|.|+.
T Consensus 155 idi~~~s~~VTISnn~f~~ 173 (330)
T 2qy1_A 155 IDMKKGVHHVTVSYNYVYN 173 (330)
T ss_dssp EEEESSCEEEEEESCEEEE
T ss_pred cccccCcceEEEEcceecc
Confidence 6766666677788888863
No 30
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=96.67 E-value=0.0078 Score=62.85 Aligned_cols=89 Identities=20% Similarity=0.259 Sum_probs=60.4
Q ss_pred EEEEecCcceEEeecCCcceEEeccccccCCcccccceeEEE--EcCCeEEEeeEEeeCCCC--cccceeeEecCCCceE
Q 008485 294 ISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSATFAV--VAPKFVAVNITIRNTAGA--IKHQAVALRNGADLST 369 (564)
Q Consensus 294 v~I~~~~~~Itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v--~~~~f~~~~lt~~Nt~g~--~~~qAvAl~~~~d~~~ 369 (564)
|.|. .|+||+|.|.+ .+|.|. -|.| .+++++++||+|++.... .+..|+-+. .++++.
T Consensus 104 l~v~---snkTI~G~G~~-~~i~G~-------------gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~-~s~nVw 165 (359)
T 1idk_A 104 ITVT---SNKSLIGEGSS-GAIKGK-------------GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLD-DCDLVW 165 (359)
T ss_dssp EEEC---SSEEEEECTTT-CEEESC-------------CEEECTTCEEEEEESCEEEEECTTEETSCCSEEEC-SCEEEE
T ss_pred EEeC---CCceEEEecCC-eEEecc-------------eEEEecCCCcEEEeCeEEEcccccccccCCceeec-CCCcEE
Confidence 5553 48899998753 444442 2666 478999999999984211 234555554 578999
Q ss_pred EEeCccccccceEeec----CcceeeeccEEEecc
Q 008485 370 FYSCSFEAYQDTLYTH----SLRQFYRECDIYGTV 400 (564)
Q Consensus 370 f~~C~~~g~QDTL~~~----~~r~~~~~C~I~G~v 400 (564)
+++|+|...-|-++.. +..--..+|+|.|.-
T Consensus 166 IDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 166 IDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVS 200 (359)
T ss_dssp EESCEEEEESSCSEEECCCTTCEEEEESCEEECBC
T ss_pred EEeeEeecCCCCcEEecccCcceEEEECcEecCCc
Confidence 9999999887777753 223356788887654
No 31
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=96.37 E-value=0.087 Score=54.81 Aligned_cols=130 Identities=16% Similarity=0.179 Sum_probs=77.7
Q ss_pred CcceEEeecCCcceEEeccccccCCcccccceeEEE-EcCCeEEEeeEEeeCCC--C---------cccceeeEecCCCc
Q 008485 300 KKNLMIIGDGINQTVITGNRSVVDGWTTFNSATFAV-VAPKFVAVNITIRNTAG--A---------IKHQAVALRNGADL 367 (564)
Q Consensus 300 ~~~Itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g--~---------~~~qAvAl~~~~d~ 367 (564)
.+++||+|.|.+ ..|.|. -|.+ .+++++++||+|++... | ....|+-+ ..+.+
T Consensus 79 ~sn~TI~G~G~~-~~i~g~-------------gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i-~~s~n 143 (355)
T 1pcl_A 79 PSNTTIIGVGSN-GKFTNG-------------SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVI-DNSTN 143 (355)
T ss_pred CCCeEEEEecCC-eEEecC-------------EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEe-cCCCc
Confidence 359999998753 444442 3444 56899999999998632 1 12344444 25789
Q ss_pred eEEEeCccccccce---EeecCcceeeeccEEEeccceeeecceeEeeeeeeeeeCCCCCCceeEEecCCCCCC-----C
Q 008485 368 STFYSCSFEAYQDT---LYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPN-----Q 439 (564)
Q Consensus 368 ~~f~~C~~~g~QDT---L~~~~~r~~~~~C~I~G~vDFIfG~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~-----~ 439 (564)
+-+.+|.|....|. +-...||++. .-.|.+|..-|...+.+++|.|.... ++.+. |..+.. .
T Consensus 144 VWIDH~s~s~~~~~d~~~~~~~G~~~~---~~Dgl~Di~~~s~~VTiS~n~f~~h~-----k~~Li--G~sd~~~~~d~g 213 (355)
T 1pcl_A 144 VWVDHVTISDGSFTDDKYTTKDGEKYV---QHDGALDIKKGSDYVTISYSRFELHD-----KTILI--GHSDSNGSQDSG 213 (355)
T ss_pred EEEEeeEEeccccCccccccccCcccc---ccccceeeecCCCcEEEEeeEEcCCC-----ceEEe--CCCCCCcccccC
Confidence 99999999854221 1112245432 11356676666777789999997422 23332 333321 1
Q ss_pred CceEEEEccEEeecC
Q 008485 440 NTGTSIHNCTIRASS 454 (564)
Q Consensus 440 ~~G~vf~~c~i~~~~ 454 (564)
.....|++|.|....
T Consensus 214 ~~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 214 KLRVTFHNNVFDRVT 228 (355)
T ss_pred cceEEEECcEEeCCc
Confidence 235889999886554
No 32
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=96.33 E-value=0.042 Score=56.52 Aligned_cols=128 Identities=19% Similarity=0.249 Sum_probs=76.6
Q ss_pred cHHHHHHh---CCCCCCCCCceEEEEEcCcEEe------eeEEEEe------cCcceEEeecCCcceEEeccccccCCcc
Q 008485 262 TITDAINV---APNNTDVTNGYFLIYITAGVYE------EYISISK------NKKNLMIIGDGINQTVITGNRSVVDGWT 326 (564)
Q Consensus 262 TIq~Ai~a---a~~~~~~~~~~~~I~I~~G~Y~------E~v~I~~------~~~~Itl~G~g~~~tiI~~~~~~~~g~~ 326 (564)
-+++||.. +.. .++|.+|.|. |+-. +.|.|.. ..+++||+|.|.+ ..|.|.
T Consensus 30 dL~~Al~~~~~~~~----~~~p~iI~V~-G~I~l~~~~~~~i~v~~~~~~~~~~sn~TI~G~g~~-~~i~G~-------- 95 (326)
T 3vmv_A 30 QIQQLIDNRSRSNN----PDEPLTIYVN-GTITQGNSPQSLIDVKNHRGKAHEIKNISIIGVGTN-GEFDGI-------- 95 (326)
T ss_dssp HHHHHHHHHHHSSC----TTSCEEEEEC-SEEESTTCSSSSEEESCTTCTTSCEEEEEEEECTTC-CEEESC--------
T ss_pred HHHHHHhhcccccC----CCCCEEEEEe-eEEecCCCCCceEEEecccccccCCCCeEEEecCCC-eEEeCc--------
Confidence 48888873 111 1344677654 6654 4577641 1158999998854 344432
Q ss_pred cccceeEEE-EcCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccccceEeecCcceeeeccEEEeccceeee
Q 008485 327 TFNSATFAV-VAPKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFG 405 (564)
Q Consensus 327 t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~~~~~r~~~~~C~I~G~vDFIfG 405 (564)
-|.+ .+++++++||+|++... ....|+-+.-.++++-+.+|.|..-.+ -...++++ .|.+|..-|
T Consensus 96 -----gl~i~~a~NVIIrNl~i~~~~~-~~~DaI~i~~~s~nVWIDH~s~s~~~~---g~~~~~~~-----Dgl~di~~~ 161 (326)
T 3vmv_A 96 -----GIRLSNAHNIIIQNVSIHHVRE-GEGTAIEVTDDSKNVWIDHNEFYSEFP---GNGDSDYY-----DGLVDMKRN 161 (326)
T ss_dssp -----CEEEESEEEEEEESCEEECCCS-TTSCSEEEETTCEEEEEESCEEECCSS---TTSCTTSS-----CCSEEECTT
T ss_pred -----EEEEEecceEEEECeEEEcCCC-CCCCeEEEecCCCcEEEEeeEEecccc---CCcCcccc-----CcceEecCC
Confidence 2444 67899999999998752 345666665447899999999973210 00111222 245555545
Q ss_pred cceeEeeeeeee
Q 008485 406 NAAVVLQNCNIY 417 (564)
Q Consensus 406 ~~~a~f~~c~i~ 417 (564)
....-+++|.|.
T Consensus 162 s~~VTISnn~f~ 173 (326)
T 3vmv_A 162 AEYITVSWNKFE 173 (326)
T ss_dssp CEEEEEESCEEE
T ss_pred CceEEEEceEEe
Confidence 555667777775
No 33
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=96.04 E-value=0.024 Score=58.60 Aligned_cols=85 Identities=14% Similarity=0.134 Sum_probs=59.2
Q ss_pred eEEEEEcCcEEee----eEEEEecCcceEEeecCCcceEEeccccccCCcccccceeEEE-EcCCeEEEeeEEeeCCC--
Q 008485 280 YFLIYITAGVYEE----YISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSATFAV-VAPKFVAVNITIRNTAG-- 352 (564)
Q Consensus 280 ~~~I~I~~G~Y~E----~v~I~~~~~~Itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g-- 352 (564)
|.+|.| .|+..- .|.| ++++||.|.|.. .|.|. -+.+ .+++++++||+|++...
T Consensus 47 PriIvv-~G~I~~~~~~~l~v---~snkTI~G~ga~--~I~G~-------------Gi~I~~a~NVIIrnl~i~~~~~~~ 107 (340)
T 3zsc_A 47 KYVIVV-DGTIVFEPKREIKV---LSDKTIVGINDA--KIVGG-------------GLVIKDAQNVIIRNIHFEGFYMED 107 (340)
T ss_dssp CEEEEE-EEEEEEEEEEEEEE---CSSEEEEEEEEE--EEEEE-------------EEEEESCEEEEEESCEEECCCCTT
T ss_pred CEEEEE-CcEEEeCCcceEEe---cCCCEEEeccCc--EEecC-------------ceEEEcCceEEEeCeEEECCcccc
Confidence 456665 688773 4666 359999999865 56553 2344 46899999999998631
Q ss_pred -C----cccceeeEecCCCceEEEeCccccccceEee
Q 008485 353 -A----IKHQAVALRNGADLSTFYSCSFEAYQDTLYT 384 (564)
Q Consensus 353 -~----~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~~ 384 (564)
+ ....|+-+. .++++-+.+|.|....|-++.
T Consensus 108 ~~~~~~~~~DaI~i~-~s~nVWIDHcs~s~~~Dg~id 143 (340)
T 3zsc_A 108 DPRGKKYDFDYINVE-NSHHIWIDHITFVNGNDGAVD 143 (340)
T ss_dssp CTTSCSSCCCSEEEE-SCEEEEEESCEEESCSSCSEE
T ss_pred CccCCcCCCCeEEEe-cCCcEEEEeeeeccCCccceE
Confidence 1 134556554 478999999999987776555
No 34
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=95.83 E-value=0.053 Score=55.67 Aligned_cols=114 Identities=16% Similarity=0.188 Sum_probs=80.2
Q ss_pred ceeEEEEcCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccccceEeecCcceeeeccEEEe------cccee
Q 008485 330 SATFAVVAPKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYG------TVDFI 403 (564)
Q Consensus 330 sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~~~~~r~~~~~C~I~G------~vDFI 403 (564)
...+.|.|+...++|..|... |- .|++.+.+..|++|.|.|.-|-+|- .+..+|++|.|.- .-.+|
T Consensus 114 AvAl~v~~d~~~f~~c~f~g~------QD-TLy~~~~r~~~~~c~I~G~vDFIfG-~~~a~f~~c~i~~~~~~~~~~~~i 185 (319)
T 1gq8_A 114 AVALRVGSDLSAFYRCDILAY------QD-SLYVHSNRQFFINCFIAGTVDFIFG-NAAVVLQDCDIHARRPGSGQKNMV 185 (319)
T ss_dssp CCSEEECCTTEEEEEEEEECS------TT-CEEECSSEEEEESCEEEESSSCEEE-SCEEEEESCEEEECCCSTTCCEEE
T ss_pred eEEEEecCCcEEEEEeEECcc------ce-eeeecCccEEEEecEEEeeeeEEec-CCcEEEEeeEEEEecCCCCCceEE
Confidence 356778999999999999843 43 5778888899999999999999994 4678999999974 23567
Q ss_pred eecc--------eeEeeeeeeeeeCCCCCC-ceeEEecCCCCCCCCceEEEEccEEee
Q 008485 404 FGNA--------AVVLQNCNIYPRLPMSGQ-FNAITAQGRTDPNQNTGTSIHNCTIRA 452 (564)
Q Consensus 404 fG~~--------~a~f~~c~i~~~~~~~~~-~~~itA~gr~~~~~~~G~vf~~c~i~~ 452 (564)
.-.+ --+|++|+|......... ...-+.-||.= ....-.||.+|.+..
T Consensus 186 tA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW-~~~sr~v~~~t~~~~ 242 (319)
T 1gq8_A 186 TAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPW-KEYSRTVVMQSSITN 242 (319)
T ss_dssp EEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCS-STTCEEEEESCEECT
T ss_pred EeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecccC-CCcceEEEEeccCCC
Confidence 6654 248999999864321100 00012235642 123458999999864
No 35
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.61 E-value=0.057 Score=55.38 Aligned_cols=113 Identities=14% Similarity=0.176 Sum_probs=80.1
Q ss_pred ceeEEEEcCCeEEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccccceEeecCcceeeeccEEEe------cccee
Q 008485 330 SATFAVVAPKFVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYG------TVDFI 403 (564)
Q Consensus 330 sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~~~~~r~~~~~C~I~G------~vDFI 403 (564)
...+.|.|+...++|..|... |- .|++.+.+..|++|.|.|.-|-+|-. +..+|++|.|.- .-.+|
T Consensus 110 AvAl~v~~d~~~f~~c~f~g~------QD-TLy~~~~r~~~~~c~I~G~vDFIfG~-~~avf~~c~i~~~~~~~~~~~~i 181 (317)
T 1xg2_A 110 AVALRVGADMSVINRCRIDAY------QD-TLYAHSQRQFYRDSYVTGTVDFIFGN-AAVVFQKCQLVARKPGKYQQNMV 181 (317)
T ss_dssp CCSEEECCTTEEEESCEEECS------TT-CEEECSSEEEEESCEEEESSSCEEEC-CEEEEESCEEEECCCSTTCCEEE
T ss_pred eEEEEEeCCcEEEEEeEeCcc------cc-ceeecCccEEEEeeEEEeceeEEcCC-ceEEEeeeEEEEeccCCCCccEE
Confidence 356778999999999999843 43 57788888999999999999999854 678999999974 23567
Q ss_pred eecc--------eeEeeeeeeeeeCCCCC--CceeEEecCCCCCCCCceEEEEccEEee
Q 008485 404 FGNA--------AVVLQNCNIYPRLPMSG--QFNAITAQGRTDPNQNTGTSIHNCTIRA 452 (564)
Q Consensus 404 fG~~--------~a~f~~c~i~~~~~~~~--~~~~itA~gr~~~~~~~G~vf~~c~i~~ 452 (564)
.-.+ --+|++|+|........ ..+ -+.-||.= ....-.||.+|.+..
T Consensus 182 tA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~-~~yLGRpW-~~~sr~v~~~t~~~~ 238 (317)
T 1xg2_A 182 TAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEF-PTYLGRPW-KEYSRTVVMESYLGG 238 (317)
T ss_dssp EEECCCCTTSCCEEEEESCEEEECTTTGGGTTTS-CEEEECCS-STTCEEEEESCEECT
T ss_pred EecCcCCCCCCcEEEEECCEEecCCCccccccce-eEEeeccc-CCCceEEEEecccCC
Confidence 6554 34799999986432100 001 12235632 123458999999864
No 36
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=95.56 E-value=0.038 Score=57.65 Aligned_cols=146 Identities=18% Similarity=0.202 Sum_probs=86.3
Q ss_pred CceEEEEEcCcEEee----------------eEEEEecCcceEEeecCCcceEEeccccccCCcccccceeEEE----Ec
Q 008485 278 NGYFLIYITAGVYEE----------------YISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSATFAV----VA 337 (564)
Q Consensus 278 ~~~~~I~I~~G~Y~E----------------~v~I~~~~~~Itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v----~~ 337 (564)
+.|.+|.| .|+..- +|.| .+++||+|.|.+. .|.+ .-|.| .+
T Consensus 52 ~~p~vI~V-~GtI~~~~~~~~~s~~~~~~~~~l~v---~snkTI~G~G~~~-~i~g-------------~gl~i~~~~~~ 113 (361)
T 1pe9_A 52 AEAKIIQI-KGTIDISGGTPYTDFADQKARSQINI---PANTTVIGLGTDA-KFIN-------------GSLIIDGTDGT 113 (361)
T ss_dssp TSCEEEEE-CSEEETTTTCCCCSHHHHHHHSEEEC---CSSEEEEECTTCC-EEES-------------SEEEEEGGGTC
T ss_pred CCcEEEEE-CCEEecCCccccccccccccceeEEe---cCCcEEEccCCCe-EEec-------------CEEEEecCCCC
Confidence 34567766 566652 3444 3599999987543 3443 24566 46
Q ss_pred CCeEEEeeEEeeCCC--C---------cccceeeEecCCCceEEEeCccccccce-----EeecCcceeeeccEEEeccc
Q 008485 338 PKFVAVNITIRNTAG--A---------IKHQAVALRNGADLSTFYSCSFEAYQDT-----LYTHSLRQFYRECDIYGTVD 401 (564)
Q Consensus 338 ~~f~~~~lt~~Nt~g--~---------~~~qAvAl~~~~d~~~f~~C~~~g~QDT-----L~~~~~r~~~~~C~I~G~vD 401 (564)
++++++||+|++... | ....|+-+.-.+.++-+.+|.|....|. .| .||++. .-.|.+|
T Consensus 114 ~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~--~G~~~~---~~DgllD 188 (361)
T 1pe9_A 114 NNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTK--DGETYV---QHDGALD 188 (361)
T ss_dssp EEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEE--TTEECC---CCCCSEE
T ss_pred ceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccc--cCccee---eccceee
Confidence 899999999998642 1 1234455543478999999999854322 12 244432 1125667
Q ss_pred eeeecceeEeeeeeeeeeCCCCCCceeEEecCCCCCC-----CCceEEEEccEEeec
Q 008485 402 FIFGNAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPN-----QNTGTSIHNCTIRAS 453 (564)
Q Consensus 402 FIfG~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~-----~~~G~vf~~c~i~~~ 453 (564)
+.-|...+.+.+|.|.... ++++. |..+.. ......|+++.|...
T Consensus 189 i~~~s~~VTiS~n~f~~h~-----k~~Li--G~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 189 IKRGSDYVTISNSLIDQHD-----KTMLI--GHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp ECTTCEEEEEESCEEEEEE-----ECEEE--SCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred eecCCCcEEEEeeEEcCCC-----ceeEe--cCCCCCcccccCcceEEEECeEEcCc
Confidence 6656667788888886432 12222 333321 123577888887644
No 37
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=95.14 E-value=0.11 Score=53.73 Aligned_cols=133 Identities=13% Similarity=0.131 Sum_probs=74.3
Q ss_pred EcCCeEEEeeEEeeCCCCcccceeeEecCCCc-eEEEeCccccc----------cceEeecCcceeeeccEEEecccee-
Q 008485 336 VAPKFVAVNITIRNTAGAIKHQAVALRNGADL-STFYSCSFEAY----------QDTLYTHSLRQFYRECDIYGTVDFI- 403 (564)
Q Consensus 336 ~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~-~~f~~C~~~g~----------QDTL~~~~~r~~~~~C~I~G~vDFI- 403 (564)
..+ +.++||+++|+.. ..+-+ ...++ +.+.+|.+... -|.+-.....-..++|+|.-.-|-|
T Consensus 104 ~~~-v~i~giti~nsp~----~~i~i-~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi~s~nV~I~n~~i~~gDDcIa 177 (335)
T 1k5c_A 104 KGS-GTYKKFEVLNSPA----QAISV-GPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDVSANNVTIQNCIVKNQDDCIA 177 (335)
T ss_dssp EEE-EEEESCEEESCSS----CCEEE-EEEEEEEEEESCEEECGGGGGGGCCCSCCSEEEECSSEEEESCEEESSSCSEE
T ss_pred ceE-EEEEEEEEECCCc----ceEEE-EccCCeEEEEEEEEECCCCcccccCCCCCeEcccCCeEEEEeeEEEcCCCEEE
Confidence 345 8999999998843 22222 24566 88888888764 3445442234467888888554532
Q ss_pred eec-ceeEeeeeeeeeeCCCCCCceeEEecCCCC-CCCCceEEEEccEEeecCCCCCCCCcceEEeeccccCcCcEEEec
Q 008485 404 FGN-AAVVLQNCNIYPRLPMSGQFNAITAQGRTD-PNQNTGTSIHNCTIRASSDLASGSQTVQTYLGRPWKEYSRTVYMQ 481 (564)
Q Consensus 404 fG~-~~a~f~~c~i~~~~~~~~~~~~itA~gr~~-~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~ 481 (564)
++. ...+|+||.+..- .| |.. |... ...-..+.|.||++...... ...+++-||+-+....+.|-+
T Consensus 178 iksg~nI~i~n~~~~~g------hG-isI-GS~g~~~~v~nV~v~n~~~~~t~~g----irIKt~~g~~~G~v~nI~f~n 245 (335)
T 1k5c_A 178 INDGNNIRFENNQCSGG------HG-ISI-GSIATGKHVSNVVIKGNTVTRSMYG----VRIKAQRTATSASVSGVTYDA 245 (335)
T ss_dssp EEEEEEEEEESCEEESS------CC-EEE-EEECTTCEEEEEEEESCEEEEEEEE----EEEEEETTCCSCEEEEEEEES
T ss_pred eeCCeeEEEEEEEEECC------cc-CeE-eeccCCCCEEEEEEEeeEEECCCce----EEEEEeCCCCcceEeeeEEEE
Confidence 222 4567888887631 12 322 2221 23345678888888876521 112333344312345666666
Q ss_pred cCCCC
Q 008485 482 SFMDS 486 (564)
Q Consensus 482 s~i~~ 486 (564)
-.|.+
T Consensus 246 i~~~~ 250 (335)
T 1k5c_A 246 NTISG 250 (335)
T ss_dssp CEEEE
T ss_pred EEEEc
Confidence 66654
No 38
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=94.92 E-value=0.21 Score=54.98 Aligned_cols=108 Identities=13% Similarity=0.112 Sum_probs=73.7
Q ss_pred EEcCCeEEEeeEEeeCCCCcccceeeEecCC-Cc--eEEEeCcccc----ccceEeecCcceeeeccEEEeccceee-ec
Q 008485 335 VVAPKFVAVNITIRNTAGAIKHQAVALRNGA-DL--STFYSCSFEA----YQDTLYTHSLRQFYRECDIYGTVDFIF-GN 406 (564)
Q Consensus 335 v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~-d~--~~f~~C~~~g----~QDTL~~~~~r~~~~~C~I~G~vDFIf-G~ 406 (564)
....++.++||+|+|+. ...+.+.... +. +.+.++.+.+ .-|.+-.. .....++|+|.-.-|-|- +.
T Consensus 290 ~~c~nV~I~Giti~Nsp----~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~-~nV~I~n~~i~~gDDcIaIks 364 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPP----FNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY-PGTILQDVFYHTDDDGLKMYY 364 (549)
T ss_dssp SSCEEEEEESCEEECCS----SCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC-TTCEEEEEEEEESSCCEECCS
T ss_pred CCceEEEEECcEEECCC----ceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc-CCEEEEeeEEeCCCCEEEECC
Confidence 34568999999999984 3445555455 67 8999998764 24555555 455788999987777653 44
Q ss_pred ceeEeeeeeeeeeCCCCCCcee-EEecCCCCCCCCceEEEEccEEeecC
Q 008485 407 AAVVLQNCNIYPRLPMSGQFNA-ITAQGRTDPNQNTGTSIHNCTIRASS 454 (564)
Q Consensus 407 ~~a~f~~c~i~~~~~~~~~~~~-itA~gr~~~~~~~G~vf~~c~i~~~~ 454 (564)
...+++||.+.... .+. |+. |+. +..-..+.|.||+|....
T Consensus 365 ~NI~I~n~~~~~~~-----g~~~Isi-Gs~-~~~V~NV~v~n~~i~~s~ 406 (549)
T 1x0c_A 365 SNVTARNIVMWKES-----VAPVVEF-GWT-PRNTENVLFDNVDVIHQA 406 (549)
T ss_dssp SSEEEEEEEEEECS-----SSCSEEC-CBS-CCCEEEEEEEEEEEEECC
T ss_pred CCEEEEeeEEEcCC-----CCceEEE-CCC-CCcEEEEEEEeeEEECcc
Confidence 57789999997521 123 443 543 445567899999998765
No 39
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=94.91 E-value=0.13 Score=53.24 Aligned_cols=115 Identities=16% Similarity=0.206 Sum_probs=76.2
Q ss_pred eeeEecCCCceEEEeCccccc--------------------cc-eE--eecCcceeeeccEEEeccceeeec-ceeEeee
Q 008485 358 AVALRNGADLSTFYSCSFEAY--------------------QD-TL--YTHSLRQFYRECDIYGTVDFIFGN-AAVVLQN 413 (564)
Q Consensus 358 AvAl~~~~d~~~f~~C~~~g~--------------------QD-TL--~~~~~r~~~~~C~I~G~vDFIfG~-~~a~f~~ 413 (564)
...+.+.++.+.++|..|... |. .| .+.+.|..|++|.|.|.=|-+|-. +..+|.+
T Consensus 88 satv~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~gr~~~~~ 167 (342)
T 2nsp_A 88 SSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSGGRSFFSD 167 (342)
T ss_dssp TCSEEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECSSEEEEES
T ss_pred eeEEEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECCCCEEEEc
Confidence 346677888888888888632 33 56 456778899999999999988876 5789999
Q ss_pred eeeeeeCCCCCCceeEEecCCCCCCCCceEEEEccEEeecCCCCCCCCcceEEe---eccccCcCcEEEeccCCCC
Q 008485 414 CNIYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRASSDLASGSQTVQTYL---GRPWKEYSRTVYMQSFMDS 486 (564)
Q Consensus 414 c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yL---GRpW~~~sr~v~~~s~i~~ 486 (564)
|.|.- .-..|-=.+ --+|++|.|..-..-..+......|+ +|+-....--||.+|.|..
T Consensus 168 c~I~G------~vDFIFG~a--------~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~~~~~~~G~vf~~c~i~~ 229 (342)
T 2nsp_A 168 CRISG------TVDFIFGDG--------TALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIR 229 (342)
T ss_dssp CEEEE------SEEEEEESS--------EEEEESCEEEECCCTTSCTTSCCEEEEEECCBTTCSCCEEEESCEEEE
T ss_pred CEEEe------ceEEEeCCc--------eEEEecCEEEEecCcccccccCceEEEccCCCCCCCCEEEEEcCEEec
Confidence 99973 234565433 25999999987542111100001232 4443344458999999853
No 40
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=94.91 E-value=0.14 Score=53.52 Aligned_cols=112 Identities=17% Similarity=0.220 Sum_probs=76.5
Q ss_pred eeeEecCCCceEEEeCccccc--------------------cc-eEee--cCcceeeeccEEEeccceeeec--ceeEee
Q 008485 358 AVALRNGADLSTFYSCSFEAY--------------------QD-TLYT--HSLRQFYRECDIYGTVDFIFGN--AAVVLQ 412 (564)
Q Consensus 358 AvAl~~~~d~~~f~~C~~~g~--------------------QD-TL~~--~~~r~~~~~C~I~G~vDFIfG~--~~a~f~ 412 (564)
...+.+.++.+.++|+.|... |. .|++ ++.|..|++|.+.|.=|-+|-. +..+|.
T Consensus 114 saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~~gr~yf~ 193 (364)
T 3uw0_A 114 SSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKTGSRSYFS 193 (364)
T ss_dssp CCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECTTCEEEEE
T ss_pred eeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCCCCCEEEE
Confidence 356778899999999998622 32 5666 3668889999999999988865 789999
Q ss_pred eeeeeeeCCCCCCceeEEecCCCCCCCCceEEEEccEEeecCCCCCCCCcceEEe---eccccCcCcEEEeccCCC
Q 008485 413 NCNIYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRASSDLASGSQTVQTYL---GRPWKEYSRTVYMQSFMD 485 (564)
Q Consensus 413 ~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yL---GRpW~~~sr~v~~~s~i~ 485 (564)
+|.|. |.-..|-=.+ --+|+||.|......... ....|+ +|+-....--||.+|.|.
T Consensus 194 ~c~I~------GtvDFIFG~a--------~a~f~~c~i~~~~~~~~~--~~~g~ITA~~~~~~~~~G~vf~~c~i~ 253 (364)
T 3uw0_A 194 DCEIS------GHVDFIFGSG--------ITVFDNCNIVARDRSDIE--PPYGYITAPSTLTTSPYGLIFINSRLT 253 (364)
T ss_dssp SCEEE------ESEEEEEESS--------EEEEESCEEEECCCSSCS--SCCEEEEEECCCTTCSCCEEEESCEEE
T ss_pred cCEEE------cCCCEECCcc--------eEEEEeeEEEEeccCccc--CCccEEEeCCcCCCCCcEEEEEeeEEe
Confidence 99997 3334665433 249999999875321100 011232 454333344799999985
No 41
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=94.88 E-value=0.1 Score=55.16 Aligned_cols=130 Identities=16% Similarity=0.235 Sum_probs=77.2
Q ss_pred CcceEEeecCCcceEEeccccccCCcccccceeEEEEcCCeEEEeeEEeeCCC--C-------------cccceeeEecC
Q 008485 300 KKNLMIIGDGINQTVITGNRSVVDGWTTFNSATFAVVAPKFVAVNITIRNTAG--A-------------IKHQAVALRNG 364 (564)
Q Consensus 300 ~~~Itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g--~-------------~~~qAvAl~~~ 364 (564)
.+++||+|.|.+- .|.| ..|.|.+++++++||+|++... | ....|+-+ ..
T Consensus 126 ~snkTI~G~G~~~-~i~g-------------~gl~i~~~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i-~~ 190 (399)
T 2o04_A 126 PANTTIVGSGTNA-KVVG-------------GNFQIKSDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITI-NG 190 (399)
T ss_dssp CSSEEEEESSSCC-EEES-------------CEEEECSEEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEE-ES
T ss_pred CCCceEEeccCCe-EEee-------------CEEEeeCCCEEEeCeEEecCccccccccccccccccccCCCCeEEe-cC
Confidence 4599999987643 4443 3467777899999999998632 1 12244444 35
Q ss_pred CCceEEEeCccccccce---EeecCcceeeeccEEEeccceeeecceeEeeeeeeeeeCCCCCCceeEEecCCCCCC---
Q 008485 365 ADLSTFYSCSFEAYQDT---LYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPN--- 438 (564)
Q Consensus 365 ~d~~~f~~C~~~g~QDT---L~~~~~r~~~~~C~I~G~vDFIfG~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~--- 438 (564)
+.++-+.+|.|.-..|. +-..-||+|.. -.|.+|+.-|...+.+++|.|.... ++.+. |..+..
T Consensus 191 s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~---~Dgl~Di~~~s~~VTISnn~f~~h~-----k~~Li--G~sd~~~~d 260 (399)
T 2o04_A 191 GTHIWIDHCTFNDGSRPDSTSPKYYGRKYQH---HDGQTDASNGANYITMSYNYYHDHD-----KSSIF--GSSDSKTSD 260 (399)
T ss_dssp CEEEEEESCEEECTTCCGGGSCEETTEECCC---CCCSEEEETTCEEEEEESCEEEEEE-----ECCEE--SCCTTCGGG
T ss_pred CCcEEEEeeeeecCCCccccccccccceeec---cccceeeeccCCcEEEEeeEEcCCC-----ceeEe--CCCCCCccc
Confidence 78999999999854331 00011444331 1356676656667788999987432 12222 332211
Q ss_pred -CCceEEEEccEEeecC
Q 008485 439 -QNTGTSIHNCTIRASS 454 (564)
Q Consensus 439 -~~~G~vf~~c~i~~~~ 454 (564)
......|+++.|....
T Consensus 261 ~g~~~vT~h~N~f~~~~ 277 (399)
T 2o04_A 261 DGKLKITLHHNRYKNIV 277 (399)
T ss_dssp TTCCCEEEESCEEEEEE
T ss_pred cCceeEEEECcEecCCc
Confidence 1235788888886543
No 42
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=94.70 E-value=0.18 Score=53.44 Aligned_cols=111 Identities=14% Similarity=0.168 Sum_probs=75.5
Q ss_pred eEecCCCceEEEeCccc---c-------cc-ceEeecCcceeeeccEEEeccceeee-------------cceeEeeeee
Q 008485 360 ALRNGADLSTFYSCSFE---A-------YQ-DTLYTHSLRQFYRECDIYGTVDFIFG-------------NAAVVLQNCN 415 (564)
Q Consensus 360 Al~~~~d~~~f~~C~~~---g-------~Q-DTL~~~~~r~~~~~C~I~G~vDFIfG-------------~~~a~f~~c~ 415 (564)
-+.+.++.+..+|..|. | .| -.|++.+.|..|++|.+.|.=|-+|- .+..+|.+|.
T Consensus 195 T~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~Cy 274 (422)
T 3grh_A 195 VFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSY 274 (422)
T ss_dssp SEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCE
T ss_pred EEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecE
Confidence 45678888888888885 2 23 47888888999999999999999984 4788999999
Q ss_pred eeeeCCCCCCceeEEecCCCCCCCCceEEEEccEEeecCCCCCCCCcceEEeec-cccCcCcEEEeccCCCC
Q 008485 416 IYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRASSDLASGSQTVQTYLGR-PWKEYSRTVYMQSFMDS 486 (564)
Q Consensus 416 i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGR-pW~~~sr~v~~~s~i~~ 486 (564)
|. |.-..|-=.+ --+|++|.|..-..... ..+-+--+| +=....--||.+|.|..
T Consensus 275 Ie------GtVDFIFG~a--------~AvFe~C~I~s~~~~~~--~~g~ITA~~t~~~~~~Gfvf~nC~ita 330 (422)
T 3grh_A 275 IE------GDVDIVSGRG--------AVVFDNTEFRVVNSRTQ--QEAYVFAPATLSNIYYGFLAVNSRFNA 330 (422)
T ss_dssp EE------ESEEEEEESS--------EEEEESCEEEECCSSCS--SCCEEEEECCBTTCCCCEEEESCEEEE
T ss_pred Ee------ccccEEccCc--------eEEEEeeEEEEecCCCC--CceEEEecCCCCCCCCEEEEECCEEEe
Confidence 97 3334565332 25999999987542110 011111233 22233457999999864
No 43
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=94.54 E-value=0.15 Score=54.24 Aligned_cols=130 Identities=16% Similarity=0.188 Sum_probs=75.9
Q ss_pred CcceEEeecCCcceEEeccccccCCcccccceeEEE-EcCCeEEEeeEEeeCCC--C-------------cccceeeEec
Q 008485 300 KKNLMIIGDGINQTVITGNRSVVDGWTTFNSATFAV-VAPKFVAVNITIRNTAG--A-------------IKHQAVALRN 363 (564)
Q Consensus 300 ~~~Itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g--~-------------~~~qAvAl~~ 363 (564)
.+++||+|.|.+. .|.| .-|.+ .+++++++||+|++... | ....|+-+ .
T Consensus 131 ~snkTI~G~G~~~-~i~g-------------~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i-~ 195 (416)
T 1vbl_A 131 GSNTSIIGVGKDA-KIKG-------------GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISI-E 195 (416)
T ss_dssp CSSEEEEECTTCC-EEES-------------CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEE-E
T ss_pred CCCeeEEecCCCe-EEec-------------CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEe-c
Confidence 3589999988543 4444 23555 46899999999998632 1 11234444 2
Q ss_pred CCCceEEEeCccccccce---EeecCcceeeeccEEEeccceeeecceeEeeeeeeeeeCCCCCCceeEEecCCCCCC--
Q 008485 364 GADLSTFYSCSFEAYQDT---LYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPN-- 438 (564)
Q Consensus 364 ~~d~~~f~~C~~~g~QDT---L~~~~~r~~~~~C~I~G~vDFIfG~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~-- 438 (564)
.+.++-+.+|.|....|. .-..-||++. .--|.+|+.=|...+.+.+|.|.... ++.+. |..+..
T Consensus 196 ~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~---~~DGl~Di~~~s~~VTISnn~f~~h~-----k~~Li--G~sd~~~~ 265 (416)
T 1vbl_A 196 GSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQ---QHDGALDIKNSSDFITISYNVFTNHD-----KVTLI--GASDSRMA 265 (416)
T ss_dssp SCEEEEEESCEEECTTCCGGGSCEETTEECC---CCCCSEEEESSCEEEEEESCEEEEEE-----ECCEE--CSCTTCGG
T ss_pred CCceEEEEccEEecCCCcccccccccCccee---ecccceeeecCCCcEEEEeeEEcCCC-----ceeEe--CCCCCCcc
Confidence 578999999999854321 0001145442 11356676666667788999887432 12222 333221
Q ss_pred --CCceEEEEccEEeecC
Q 008485 439 --QNTGTSIHNCTIRASS 454 (564)
Q Consensus 439 --~~~G~vf~~c~i~~~~ 454 (564)
....+.|++|.|....
T Consensus 266 d~g~~~VT~hhN~f~~~~ 283 (416)
T 1vbl_A 266 DSGHLRVTLHHNYYKNVT 283 (416)
T ss_dssp GTTCCCEEEESCEEEEEE
T ss_pred cCCceEEEEECcEecCCc
Confidence 1224788888886543
No 44
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=92.49 E-value=1.2 Score=49.25 Aligned_cols=106 Identities=12% Similarity=0.081 Sum_probs=72.1
Q ss_pred EcCCeEEEeeEEeeCCCCcccceeeEecCCCce--EEEeCcccc---c-cceEeecCcceeeeccEEEecccee-eecce
Q 008485 336 VAPKFVAVNITIRNTAGAIKHQAVALRNGADLS--TFYSCSFEA---Y-QDTLYTHSLRQFYRECDIYGTVDFI-FGNAA 408 (564)
Q Consensus 336 ~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~--~f~~C~~~g---~-QDTL~~~~~r~~~~~C~I~G~vDFI-fG~~~ 408 (564)
...++.++||+|.|+.. ..+-+ ...+.+ .+.+|.+.+ . -|.+-.. ..-..++|+|.-.-|-| .+...
T Consensus 331 ~c~NV~I~Giti~NSp~----w~i~~-~~c~nV~~~I~nv~i~~~~~~nTDGIDi~-~NV~I~nc~I~~gDDcIaIks~N 404 (574)
T 1ogo_X 331 GGQTWYCVGPTINAPPF----NTMDF-NGNSGISSQISDYKQVGAFFFQTDGPEIY-PNSVVHDVFWHVNDDAIKIYYSG 404 (574)
T ss_dssp SSEEEEEESCEEECCSS----CSEEE-CSSSCEEEEEEEEEEECCCSTTCCCCBCC-TTCEEEEEEEEESSCSEECCSTT
T ss_pred CceeEEEECeEEECCCC----cEEee-cCCCChhhEEEeeEeeCCCCCCCccCccc-CCEEEEeeEEECCCCEEEECCcc
Confidence 56889999999999732 22222 456778 899998763 3 5666666 45578899998666654 34467
Q ss_pred eEeeeeeeeeeCCCCCCcee-EEecCCCCCCCCceEEEEccEEeecC
Q 008485 409 VVLQNCNIYPRLPMSGQFNA-ITAQGRTDPNQNTGTSIHNCTIRASS 454 (564)
Q Consensus 409 a~f~~c~i~~~~~~~~~~~~-itA~gr~~~~~~~G~vf~~c~i~~~~ 454 (564)
.+++||.+.... .+. |.. |. ++..-..+.|.||+|....
T Consensus 405 I~I~nc~i~~g~-----g~g~IsI-GS-~~g~V~NV~v~N~~i~~~~ 444 (574)
T 1ogo_X 405 ASVSRATIWKCH-----NDPIIQM-GW-TSRDISGVTIDTLNVIHTR 444 (574)
T ss_dssp CEEEEEEEEECS-----SSCSEEC-CS-SCCCEEEEEEEEEEEEECC
T ss_pred EEEEeEEEECCC-----CCceEEE-cC-CCCcEEEEEEEeEEEECCc
Confidence 789999987532 122 443 43 3445568899999998765
No 45
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=91.38 E-value=2.1 Score=43.87 Aligned_cols=113 Identities=17% Similarity=0.171 Sum_probs=72.6
Q ss_pred EcCCeEEEeeEEeeCCCCc--ccceeeEec-CCCceEEEeCccccccceEeecCcce-eeeccEEEeccceeeec-----
Q 008485 336 VAPKFVAVNITIRNTAGAI--KHQAVALRN-GADLSTFYSCSFEAYQDTLYTHSLRQ-FYRECDIYGTVDFIFGN----- 406 (564)
Q Consensus 336 ~~~~f~~~~lt~~Nt~g~~--~~qAvAl~~-~~d~~~f~~C~~~g~QDTL~~~~~r~-~~~~C~I~G~vDFIfG~----- 406 (564)
..+++.++|++|.+..+.. .+-.=++.+ .+..+.+.||.|...-|-+.+.+++. .+++|++.+.-.+-+|.
T Consensus 130 ~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGSlg~~~ 209 (339)
T 2iq7_A 130 SATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINSGTNITFTGGTCSGGHGLSIGSVGGRS 209 (339)
T ss_dssp SCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEESSSS
T ss_pred ccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcCCccEEEEeEEEECCceEEECcCCccc
Confidence 4567899999999874310 011123554 45889999999987778888888765 78899998766676665
Q ss_pred ----ceeEeeeeeeeeeCCCCCCceeEE-ecCCCCCCCCceEEEEccEEeecC
Q 008485 407 ----AAVVLQNCNIYPRLPMSGQFNAIT-AQGRTDPNQNTGTSIHNCTIRASS 454 (564)
Q Consensus 407 ----~~a~f~~c~i~~~~~~~~~~~~it-A~gr~~~~~~~G~vf~~c~i~~~~ 454 (564)
..++|+||++.... ..-.|- .+|| ...-..+.|+|.++....
T Consensus 210 ~~~v~nV~v~n~~~~~~~----~girIkt~~g~--~G~v~nI~~~ni~~~~v~ 256 (339)
T 2iq7_A 210 DNTVKTVTISNSKIVNSD----NGVRIKTVSGA--TGSVSGVTYSGITLSNIA 256 (339)
T ss_dssp CCEEEEEEEEEEEEESCS----EEEEEEEETTC--CCEEEEEEEEEEEEEEES
T ss_pred CCCEEEEEEEeeEEECCC----cEEEEEEeCCC--CeEEEEEEEEeEEccCcc
Confidence 24578888886311 111222 2333 223346778888888653
No 46
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=89.83 E-value=7.4 Score=40.84 Aligned_cols=82 Identities=13% Similarity=0.160 Sum_probs=55.0
Q ss_pred eEEEEcCCeEEEeeEEeeCCCCcccceeeEecC--CCceEEEeCccccccc---------eEeecC---cceeeeccEEE
Q 008485 332 TFAVVAPKFVAVNITIRNTAGAIKHQAVALRNG--ADLSTFYSCSFEAYQD---------TLYTHS---LRQFYRECDIY 397 (564)
Q Consensus 332 t~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~--~d~~~f~~C~~~g~QD---------TL~~~~---~r~~~~~C~I~ 397 (564)
-+.|.+++.++++++|.+... .+|++. +.+..+.+|.+.+..| .+.++. ....|++|++.
T Consensus 131 GI~v~gs~~~i~n~~i~~n~~------~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~ 204 (400)
T 1ru4_A 131 GAYVIGSHNTFENTAFHHNRN------TGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAW 204 (400)
T ss_dssp SEEECSSSCEEESCEEESCSS------CSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEE
T ss_pred cEEEeCCCcEEEeEEEECCCc------eeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEe
Confidence 466788889999999987632 234443 3478888999987763 444432 23478899998
Q ss_pred eccce---eeec-ceeEeeeeeeeee
Q 008485 398 GTVDF---IFGN-AAVVLQNCNIYPR 419 (564)
Q Consensus 398 G~vDF---IfG~-~~a~f~~c~i~~~ 419 (564)
...|. +++. +.++|++|..+..
T Consensus 205 ~N~ddGidl~~~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 205 ENSDDGFDLFDSPQKVVIENSWAFRN 230 (400)
T ss_dssp SCSSCSEECTTCCSCCEEESCEEEST
T ss_pred ecCCCcEEEEecCCCEEEEeEEEECC
Confidence 76652 3343 4568999988744
No 47
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=88.58 E-value=5.8 Score=40.49 Aligned_cols=111 Identities=13% Similarity=0.127 Sum_probs=75.3
Q ss_pred EEcCCeEEEeeEEeeCCC----CcccceeeEec-CCCceEEEeCccccccceEeecCcce-eeeccEEEeccceeeec--
Q 008485 335 VVAPKFVAVNITIRNTAG----AIKHQAVALRN-GADLSTFYSCSFEAYQDTLYTHSLRQ-FYRECDIYGTVDFIFGN-- 406 (564)
Q Consensus 335 v~~~~f~~~~lt~~Nt~g----~~~~qAvAl~~-~~d~~~f~~C~~~g~QDTL~~~~~r~-~~~~C~I~G~vDFIfG~-- 406 (564)
+..+++.++|++|.+..+ ..... ++.+ .+..+.+.||.|...-|-+.+.+++. .+++|+..+.-.+-+|.
T Consensus 128 i~~~nv~i~~~~I~~~~~d~~~~~ntD--Gidi~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGS~g 205 (336)
T 1nhc_A 128 VQATNVHLNDFTIDNSDGDDNGGHNTD--GFDISESTGVYISGATVKNQDDCIAINSGESISFTGGTCSGGHGLSIGSVG 205 (336)
T ss_dssp EEEEEEEEESCEEECTTHHHHTCCSCC--SEEECSCEEEEEESCEEESSSEEEEESSEEEEEEESCEEESSSEEEEEEES
T ss_pred EEeCCEEEEEEEEECCCcccccCCCCC--cEEecCCCeEEEEeCEEEcCCCEEEEeCCeEEEEEeEEEECCcCceEccCc
Confidence 337889999999998753 11222 4555 45889999999988888999988766 78999998766777765
Q ss_pred -------ceeEeeeeeeeeeCCCCCCcee-E-EecCCCCCCCCceEEEEccEEeecC
Q 008485 407 -------AAVVLQNCNIYPRLPMSGQFNA-I-TAQGRTDPNQNTGTSIHNCTIRASS 454 (564)
Q Consensus 407 -------~~a~f~~c~i~~~~~~~~~~~~-i-tA~gr~~~~~~~G~vf~~c~i~~~~ 454 (564)
..+.|+||++..- ..+. | +.+|| ...-..+.|+|.++....
T Consensus 206 ~~~~~~v~nV~v~n~~~~~t-----~~girIkt~~g~--~G~v~nI~~~ni~~~~v~ 255 (336)
T 1nhc_A 206 GRDDNTVKNVTISDSTVSNS-----ANGVRIKTIYKE--TGDVSEITYSNIQLSGIT 255 (336)
T ss_dssp SSSCCEEEEEEEEEEEEESC-----SEEEEEEEETTC--CCEEEEEEEEEEEEEEES
T ss_pred cccCCCEEEEEEEeeEEECC-----CcEEEEEEECCC--CCEEeeeEEeeEEeeccc
Confidence 2456888888631 1121 2 22333 223446788888887653
No 48
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=88.21 E-value=2.8 Score=42.96 Aligned_cols=114 Identities=14% Similarity=0.126 Sum_probs=74.2
Q ss_pred EEcCCeEEEeeEEeeCCCCc--ccceeeEec-CCCceEEEeCccccccceEeecCcce-eeeccEEEeccceeeec----
Q 008485 335 VVAPKFVAVNITIRNTAGAI--KHQAVALRN-GADLSTFYSCSFEAYQDTLYTHSLRQ-FYRECDIYGTVDFIFGN---- 406 (564)
Q Consensus 335 v~~~~f~~~~lt~~Nt~g~~--~~qAvAl~~-~~d~~~f~~C~~~g~QDTL~~~~~r~-~~~~C~I~G~vDFIfG~---- 406 (564)
...+++.++|++|.+..+.. .+-.=++.+ .+..+.+.||.|...-|-+.+.+++. .+++|++.+.-.+-+|.
T Consensus 133 ~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~g~~ 212 (339)
T 1ia5_A 133 AGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNSGENIYFSGGYCSGGHGLSIGSVGGR 212 (339)
T ss_dssp ESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSSCEEEEEECSS
T ss_pred ecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeCCeEEEEEeEEEECCceEEECcCCcc
Confidence 34578999999999874311 111224555 46889999999988788899988766 78999998766676665
Q ss_pred -----ceeEeeeeeeeeeCCCCCCceeEE-ecCCCCCCCCceEEEEccEEeecC
Q 008485 407 -----AAVVLQNCNIYPRLPMSGQFNAIT-AQGRTDPNQNTGTSIHNCTIRASS 454 (564)
Q Consensus 407 -----~~a~f~~c~i~~~~~~~~~~~~it-A~gr~~~~~~~G~vf~~c~i~~~~ 454 (564)
..+.|+||++.... ..-.|- .+|| ...-..+.|+|.++....
T Consensus 213 ~~~~v~nV~v~n~~~~~t~----~girIKt~~g~--~G~v~nI~~~ni~~~~v~ 260 (339)
T 1ia5_A 213 SDNTVKNVTFVDSTIINSD----NGVRIKTNIDT--TGSVSDVTYKDITLTSIA 260 (339)
T ss_dssp SCCEEEEEEEEEEEEESCS----EEEEEEEETTC--CCEEEEEEEEEEEEEEES
T ss_pred cCCCEEEEEEEeeEEECCC----cEEEEEEeCCC--CcEEEeeEEEEEEEECcc
Confidence 24568888886321 111232 2333 223456788888887643
No 49
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=86.55 E-value=2.9 Score=43.07 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=70.1
Q ss_pred EcCCeEEEeeEEeeCCCCc----------ccceeeEec-CCCceEEEeCccccccceEeecCcce-eeeccEEEecccee
Q 008485 336 VAPKFVAVNITIRNTAGAI----------KHQAVALRN-GADLSTFYSCSFEAYQDTLYTHSLRQ-FYRECDIYGTVDFI 403 (564)
Q Consensus 336 ~~~~f~~~~lt~~Nt~g~~----------~~qAvAl~~-~~d~~~f~~C~~~g~QDTL~~~~~r~-~~~~C~I~G~vDFI 403 (564)
..+++.++|++|.+..+.. .+-.=++.+ .+..+.+.||.+...-|-+.+.+++. .+++|++.+.-.+-
T Consensus 134 ~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGis 213 (349)
T 1hg8_A 134 GSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSGTNIVVSNMYCSGGHGLS 213 (349)
T ss_dssp SCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESSEEEEEEEEEEEESSCCEE
T ss_pred ccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeCCeEEEEEeEEEeCCcceE
Confidence 3567899999999864321 111224555 45889999999987778888888765 77888888765665
Q ss_pred eec---------ceeEeeeeeeeeeCCCCCCceeEEe-cCCCCCCCCceEEEEccEEeec
Q 008485 404 FGN---------AAVVLQNCNIYPRLPMSGQFNAITA-QGRTDPNQNTGTSIHNCTIRAS 453 (564)
Q Consensus 404 fG~---------~~a~f~~c~i~~~~~~~~~~~~itA-~gr~~~~~~~G~vf~~c~i~~~ 453 (564)
+|. ....|+||+|.... ..-.|-. +|| ...-..+.|+|.++...
T Consensus 214 iGS~G~~~~~~v~nV~v~n~~~~~~~----~GirIKt~~g~--~G~v~nI~~~ni~~~~v 267 (349)
T 1hg8_A 214 IGSVGGKSDNVVDGVQFLSSQVVNSQ----NGCRIKSNSGA--TGTINNVTYQNIALTNI 267 (349)
T ss_dssp EEEESSSSCCEEEEEEEEEEEEEEEE----EEEEEEEETTC--CEEEEEEEEEEEEEEEE
T ss_pred EccccccccCCEEEEEEEEEEEECCC----cEEEEEecCCC--CccccceEEEEEEEEcc
Confidence 654 24568888886421 1112322 222 12234567888777654
No 50
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=86.35 E-value=2.4 Score=47.94 Aligned_cols=101 Identities=18% Similarity=0.221 Sum_probs=66.8
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEcCcEEe--eeEEEEecCcceEEeecCCcceEEecccc-ccCCcccccceeEEEE
Q 008485 260 FTTITDAINVAPNNTDVTNGYFLIYITAGVYE--EYISISKNKKNLMIIGDGINQTVITGNRS-VVDGWTTFNSATFAVV 336 (564)
Q Consensus 260 f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G~Y~--E~v~I~~~~~~Itl~G~g~~~tiI~~~~~-~~~g~~t~~sat~~v~ 336 (564)
=..||+||+++..+ .+||+.+|+|+ ..|.|+. ++.|+|++- .+|.+... ..|- . .....|.|.
T Consensus 417 T~Ai~~al~aa~~g-------~~v~~P~G~Y~vt~Ti~ip~---~~~ivG~~~--~~I~~~G~~F~d~-~-~P~pvv~VG 482 (758)
T 3eqn_A 417 TQAIKNVFAKYAGC-------KIIFFDAGTYIVTDTIQIPA---GTQIVGEVW--SVIMGTGSKFTDY-N-NPQPVIQVG 482 (758)
T ss_dssp HHHHHHHHHHHTTT-------SEEECCSEEEEESSCEEECT---TCEEECCSS--EEEEECSGGGCCT-T-SCEEEEEES
T ss_pred HHHHHHHHHHhcCC-------CEEEECCCEeEECCeEEcCC---CCEEEeccc--ceEecCCccccCC-C-CCeeeEEeC
Confidence 46899999977544 58999999999 5799974 899999985 45554332 2221 1 123566662
Q ss_pred --c--CCeEEEeeEEeeCCCCcccceeeEecC-------CCceEEEeCccc
Q 008485 337 --A--PKFVAVNITIRNTAGAIKHQAVALRNG-------ADLSTFYSCSFE 376 (564)
Q Consensus 337 --~--~~f~~~~lt~~Nt~g~~~~qAvAl~~~-------~d~~~f~~C~~~ 376 (564)
| ..+.+.+|.|. +.|+. .-|+.|..+ .+.+.+.++.|.
T Consensus 483 ~~gd~G~veisdl~~~-t~g~~-~gail~ewn~~~~~~~~~~~~mwDvh~R 531 (758)
T 3eqn_A 483 APGSSGVVEITDMIFT-TRGPA-AGAIIVEWNVHDPSGQQAAAGAWDTHLI 531 (758)
T ss_dssp CTTCBSCEEEESCEEE-ECSCC-TTEEEEEECCBCCTTCTTCEEEESCBEE
T ss_pred CCCCCCeEEEEeEEEE-ecCCC-CCcEEEEEcCCCCCCCCCCeeEEEEEEE
Confidence 2 36999999997 33332 345555543 245778888777
No 51
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=84.88 E-value=10 Score=42.07 Aligned_cols=108 Identities=8% Similarity=0.075 Sum_probs=67.2
Q ss_pred EcCCeEEEeeEEeeCCCCcccceeeEec-CCCceEEEeCccccccceEeecCc------------ceeeeccEEEeccce
Q 008485 336 VAPKFVAVNITIRNTAGAIKHQAVALRN-GADLSTFYSCSFEAYQDTLYTHSL------------RQFYRECDIYGTVDF 402 (564)
Q Consensus 336 ~~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~f~~C~~~g~QDTL~~~~~------------r~~~~~C~I~G~vDF 402 (564)
..++++++|++|.+...+ +.. ++.+ .+..+.+.||.|...-|-+.+.+| .-.+++|++.+.-+.
T Consensus 361 ~~~nv~i~~v~i~~~~~~-NtD--Gidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~ 437 (608)
T 2uvf_A 361 ENHNVVANGLIHQTYDAN-NGD--GIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGA 437 (608)
T ss_dssp SCEEEEEESCEEECTTCT-TCC--SEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCS
T ss_pred cCCCEEEeeEEEcCCCCC-CCC--eEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCe
Confidence 456788888887653222 233 3444 457788889988866667777654 235788888876664
Q ss_pred -eeec------ceeEeeeeeeeeeCCCCCCce-eE-EecCCCCCCCCceEEEEccEEeec
Q 008485 403 -IFGN------AAVVLQNCNIYPRLPMSGQFN-AI-TAQGRTDPNQNTGTSIHNCTIRAS 453 (564)
Q Consensus 403 -IfG~------~~a~f~~c~i~~~~~~~~~~~-~i-tA~gr~~~~~~~G~vf~~c~i~~~ 453 (564)
++|. ....|+||.+..- ..| .| +.+||. +.-..+.|+|+++...
T Consensus 438 ~~iGS~~~~~v~nI~v~n~~~~~t-----~~GirIKt~~g~g--G~v~nI~~~ni~m~~v 490 (608)
T 2uvf_A 438 IVTGSHTGAWIEDILAENNVMYLT-----DIGLRAKSTSTIG--GGARNVTFRNNAMRDL 490 (608)
T ss_dssp EEEESCCTTCEEEEEEESCEEESC-----SEEEEEEEETTTC--CEEEEEEEEEEEEEEE
T ss_pred EEEcccCCCCEEEEEEEeEEEECC-----CceEEEeeecCCC--ceEECcEEEeeEEEcc
Confidence 3676 3478899988632 112 12 334442 2335678888888865
No 52
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=84.83 E-value=3.4 Score=45.59 Aligned_cols=29 Identities=28% Similarity=0.242 Sum_probs=22.1
Q ss_pred CcccHHHHHHhCCCCCCCCCceEEEEEcCc-EEee
Q 008485 259 NFTTITDAINVAPNNTDVTNGYFLIYITAG-VYEE 292 (564)
Q Consensus 259 ~f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G-~Y~E 292 (564)
+=..||+||+++... +.-+|+|.+| +|.-
T Consensus 63 dT~AIqkAIdaCs~~-----GGgtV~VPaG~tYLt 92 (600)
T 2x6w_A 63 SRQYLQAAIDYVSSN-----GGGTITIPAGYTWYL 92 (600)
T ss_dssp CHHHHHHHHHHHHHT-----TCEEEEECTTCEEEE
T ss_pred CHHHHHHHHHHhhhc-----CCCEEEECCCCEEEe
Confidence 345799999998653 2268999999 9965
No 53
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=83.64 E-value=7.2 Score=41.17 Aligned_cols=19 Identities=16% Similarity=0.064 Sum_probs=8.9
Q ss_pred eeeEecCCCceEEEeCccc
Q 008485 358 AVALRNGADLSTFYSCSFE 376 (564)
Q Consensus 358 AvAl~~~~d~~~f~~C~~~ 376 (564)
++++.....++.++||.+.
T Consensus 199 ~Iai~s~~~nI~I~n~~~~ 217 (422)
T 1rmg_A 199 CVTVKSPANNILVESIYCN 217 (422)
T ss_dssp EEEEEEEEEEEEEEEEEEE
T ss_pred eEEeCCCCcCEEEEeEEEc
Confidence 3444443444555555544
No 54
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=83.22 E-value=3.6 Score=42.62 Aligned_cols=114 Identities=15% Similarity=0.165 Sum_probs=73.8
Q ss_pred EEEcCCeEEEeeEEeeCCCCc--ccceeeEec-CCCceEEEeCccccccceEeecCcce-eeeccEEEeccceeeec---
Q 008485 334 AVVAPKFVAVNITIRNTAGAI--KHQAVALRN-GADLSTFYSCSFEAYQDTLYTHSLRQ-FYRECDIYGTVDFIFGN--- 406 (564)
Q Consensus 334 ~v~~~~f~~~~lt~~Nt~g~~--~~qAvAl~~-~~d~~~f~~C~~~g~QDTL~~~~~r~-~~~~C~I~G~vDFIfG~--- 406 (564)
.+..+++.++|++|.+..+.. .+-.=++.+ .+.++.+.||.|...-|-+.+.+++. .+++|++.+.--+-+|.
T Consensus 153 ~i~~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~G~ 232 (362)
T 1czf_A 153 SVQANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSGENIWFTGGTCIGGHGLSIGSVGD 232 (362)
T ss_dssp EEECSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEECS
T ss_pred EEeeCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeCCeEEEEEEEEEeCCceeEEeeccc
Confidence 333889999999999864310 111224555 45889999999998889999998765 78999999766666665
Q ss_pred ------ceeEeeeeeeeeeCCCCCCceeEEe-cCCCCCCCCceEEEEccEEeec
Q 008485 407 ------AAVVLQNCNIYPRLPMSGQFNAITA-QGRTDPNQNTGTSIHNCTIRAS 453 (564)
Q Consensus 407 ------~~a~f~~c~i~~~~~~~~~~~~itA-~gr~~~~~~~G~vf~~c~i~~~ 453 (564)
....|+||++.... ..-.|-. +|| ...-..+.|+|.++...
T Consensus 233 ~~~~~v~nV~v~n~~~~~t~----~GirIKt~~g~--~G~v~nI~~~ni~~~~v 280 (362)
T 1czf_A 233 RSNNVVKNVTIEHSTVSNSE----NAVRIKTISGA--TGSVSEITYSNIVMSGI 280 (362)
T ss_dssp SSCCEEEEEEEEEEEEEEEE----EEEEEEEETTC--CEEEEEEEEEEEEEEEE
T ss_pred cCCCCEEEEEEEeeEEECCc----eEEEEEEeCCC--CceEeeEEEEeEEEECc
Confidence 13468888886421 0112222 232 12233567777777654
No 55
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=82.59 E-value=15 Score=37.89 Aligned_cols=110 Identities=12% Similarity=0.097 Sum_probs=69.1
Q ss_pred EEcCCeEEEeeEEeeCCCCcccceeeEec-CCCceEEEeCccccccceEeecC------c-ceeeeccEEEeccceeeec
Q 008485 335 VVAPKFVAVNITIRNTAGAIKHQAVALRN-GADLSTFYSCSFEAYQDTLYTHS------L-RQFYRECDIYGTVDFIFGN 406 (564)
Q Consensus 335 v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~f~~C~~~g~QDTL~~~~------~-r~~~~~C~I~G~vDFIfG~ 406 (564)
...++++++|++|.+.....+.. ++.+ .+..+.+.||.|...-|-+.+++ . .-.+++|+..+.--+-+|.
T Consensus 180 ~~~~~v~i~~v~I~~~~~~~NtD--Gid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s~nI~I~n~~~~~ghGisiGS 257 (376)
T 1bhe_A 180 SDGDGFTAWKTTIKTPSTARNTD--GIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNISILHNDFGTGHGMSIGS 257 (376)
T ss_dssp ESCEEEEEEEEEEECCTTCSSCC--SEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEEEEEEEEEECSSSCEEEEE
T ss_pred eCCCcEEEEeEEEECCCCCCCCc--eEeecCCceEEEEeCEEecCCCeEEEcccCCCCCceEEEEEeeEEEccccEEecc
Confidence 34578999999999875433333 3444 45789999999987778888773 1 2367888887654455554
Q ss_pred -----ceeEeeeeeeeeeCCCCCCce-eEEe-cCCCCCCCCceEEEEccEEeec
Q 008485 407 -----AAVVLQNCNIYPRLPMSGQFN-AITA-QGRTDPNQNTGTSIHNCTIRAS 453 (564)
Q Consensus 407 -----~~a~f~~c~i~~~~~~~~~~~-~itA-~gr~~~~~~~G~vf~~c~i~~~ 453 (564)
..++|+||.|..- ..| .|-. ++| ...-..+.|+|.++...
T Consensus 258 e~~~v~nV~v~n~~~~~t-----~~GirIKt~~g~--~G~v~ni~f~ni~~~~v 304 (376)
T 1bhe_A 258 ETMGVYNVTVDDLKMNGT-----TNGLRIKSDKSA--AGVVNGVRYSNVVMKNV 304 (376)
T ss_dssp EESSEEEEEEEEEEEESC-----SEEEEEECCTTT--CCEEEEEEEEEEEEESC
T ss_pred CCccEeeEEEEeeEEeCC-----CcEEEEEEecCC--CceEeeEEEEeEEEeCC
Confidence 4567899988632 122 2222 222 12233567778777643
No 56
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=79.17 E-value=18 Score=39.49 Aligned_cols=77 Identities=12% Similarity=0.004 Sum_probs=55.9
Q ss_pred CC--eEEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccccceEeecCcceeeeccEEEeccc---eeeec-----c
Q 008485 338 PK--FVAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVD---FIFGN-----A 407 (564)
Q Consensus 338 ~~--f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~~~~~r~~~~~C~I~G~vD---FIfG~-----~ 407 (564)
++ +.++|+++.+..++ +.-++.+. .++.+.||.|...=|-+.+.+..-.+++|++.+... .-.|. .
T Consensus 318 ~ni~V~I~n~~i~~~~~~---NTDGidi~-~nV~I~n~~i~~gDDcIaIks~NI~I~n~~~~~~~g~~~IsiGs~~~~V~ 393 (549)
T 1x0c_A 318 DLITCRVDDYKQVGAFYG---QTDGLEMY-PGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTE 393 (549)
T ss_dssp GGEEEEEEEEEEECCCBT---TCCCCBCC-TTCEEEEEEEEESSCCEECCSSSEEEEEEEEEECSSSCSEECCBSCCCEE
T ss_pred CCCeEEEEeeEeEcCCCC---CCCccccc-CCEEEEeeEEeCCCCEEEECCCCEEEEeeEEEcCCCCceEEECCCCCcEE
Confidence 37 89999998874332 23356666 999999999998888888887556899999975432 33453 3
Q ss_pred eeEeeeeeeee
Q 008485 408 AVVLQNCNIYP 418 (564)
Q Consensus 408 ~a~f~~c~i~~ 418 (564)
.+.|+||.|..
T Consensus 394 NV~v~n~~i~~ 404 (549)
T 1x0c_A 394 NVLFDNVDVIH 404 (549)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEeeEEEC
Confidence 46789999864
No 57
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=79.04 E-value=16 Score=38.92 Aligned_cols=46 Identities=24% Similarity=0.266 Sum_probs=34.7
Q ss_pred CcccHHHHHHhCCCCCCCCCceEEEEEcCc----EEee--eEEEEecCcceEEeecCCc
Q 008485 259 NFTTITDAINVAPNNTDVTNGYFLIYITAG----VYEE--YISISKNKKNLMIIGDGIN 311 (564)
Q Consensus 259 ~f~TIq~Ai~aa~~~~~~~~~~~~I~I~~G----~Y~E--~v~I~~~~~~Itl~G~g~~ 311 (564)
+-..||+||+++... .+.-+|+|.+| +|.= .+.++ .+++|.|++..
T Consensus 67 DTaAIQkAIdaA~a~----~GGGtVyVPaG~~~~tYlvt~tI~Lk---SnV~L~Ge~~A 118 (514)
T 2vbk_A 67 NYQAIQNAIDAVASL----PSGGELFIPASNQAVGYIVGSTLLIP---GGVNIRGVGKA 118 (514)
T ss_dssp CHHHHHHHHHHHHTS----TTCEEEECCCCSSTTCEEESSCEEEC---TTEEEECCSTT
T ss_pred cHHHHHHHHHHHhhc----CCCeEEEECCCCcceeEEECCeEEec---CCeEEEEecCc
Confidence 456899999988542 12268999999 8974 57774 48999999864
No 58
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=76.28 E-value=33 Score=36.38 Aligned_cols=110 Identities=16% Similarity=0.179 Sum_probs=64.7
Q ss_pred EEEcCCeEEEeeEEeeCCCCcccceeeEecC-CCceEEEeCccccccceEeecCcc-------------eeeeccEE---
Q 008485 334 AVVAPKFVAVNITIRNTAGAIKHQAVALRNG-ADLSTFYSCSFEAYQDTLYTHSLR-------------QFYRECDI--- 396 (564)
Q Consensus 334 ~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~-~d~~~f~~C~~~g~QDTL~~~~~r-------------~~~~~C~I--- 396 (564)
....++++++||+|.|... ... ++.+. +.++.+.||.|...=|-+.+.+++ -.+++|++
T Consensus 218 ~~~~~nv~i~~v~I~~~~~--NtD--Gidi~~s~nV~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~ 293 (448)
T 3jur_A 218 PVLSENVIIRNIEISSTGP--NND--GIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQ 293 (448)
T ss_dssp EESCEEEEEESCEEEECST--TCC--SBCCBSCEEEEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECS
T ss_pred eeccCCEEEEeEEEeeccC--CCc--cccccCCcCEEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecC
Confidence 3345778899999988622 122 34443 577888899888766777776652 25678888
Q ss_pred Eeccceeeec------ceeEeeeeeeeeeCCCCCCcee-E-EecCCCCCCCCceEEEEccEEeecC
Q 008485 397 YGTVDFIFGN------AAVVLQNCNIYPRLPMSGQFNA-I-TAQGRTDPNQNTGTSIHNCTIRASS 454 (564)
Q Consensus 397 ~G~vDFIfG~------~~a~f~~c~i~~~~~~~~~~~~-i-tA~gr~~~~~~~G~vf~~c~i~~~~ 454 (564)
.|.--+.+|. ...+|+||.+.. ...|. | |.++|. ..-..+.|.|.++....
T Consensus 294 ~gh~gisiGS~~~~~v~nV~v~n~~~~~-----t~~GirIKt~~g~g--G~v~nI~f~ni~m~~v~ 352 (448)
T 3jur_A 294 ASHGGLVIGSEMSGGVRNVVARNNVYMN-----VERALRLKTNSRRG--GYMENIFFIDNVAVNVS 352 (448)
T ss_dssp SCSEEEEECSSCTTCEEEEEEESCEEES-----CSEEEEEECCTTTC--SEEEEEEEESCEEEEES
T ss_pred CCcceEEECCcccCcEEEEEEEEEEEec-----ccceEEEEEEcCCC--ceEeeEEEEEEEEECCc
Confidence 2332344554 245788888842 11121 2 222321 22335668888877654
No 59
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=65.69 E-value=32 Score=37.13 Aligned_cols=94 Identities=9% Similarity=0.057 Sum_probs=56.2
Q ss_pred eEecCCCceEEEeCccccccceE-----------eecCcceeeeccEEEeccce----ee--------ecceeEeeeeee
Q 008485 360 ALRNGADLSTFYSCSFEAYQDTL-----------YTHSLRQFYRECDIYGTVDF----IF--------GNAAVVLQNCNI 416 (564)
Q Consensus 360 Al~~~~d~~~f~~C~~~g~QDTL-----------~~~~~r~~~~~C~I~G~vDF----If--------G~~~a~f~~c~i 416 (564)
.|++.++.+.++++.|.+....+ ++.+.+.-+++|.|.|.-+- |- ......+++|.|
T Consensus 88 ~l~i~g~~v~i~GL~i~~~~~~~~~~~~~~~~~iav~G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I 167 (506)
T 1dbg_A 88 KVELRGEHLILEGIWFKDGNRAIQAWKSHGPGLVAIYGSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSF 167 (506)
T ss_dssp EEEECSSSEEEESCEEEEECCCTTTCCTTSCCSEEECSSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEE
T ss_pred eEEEEcCCEEEECeEEECCCcceeeeecccccceEEecCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEE
Confidence 57788899999999998764322 33334556889999875221 21 223457999999
Q ss_pred eeeCCCCCCc----eeEEecCCC-CCCCCceEEEEccEEeecC
Q 008485 417 YPRLPMSGQF----NAITAQGRT-DPNQNTGTSIHNCTIRASS 454 (564)
Q Consensus 417 ~~~~~~~~~~----~~itA~gr~-~~~~~~G~vf~~c~i~~~~ 454 (564)
..+... +.. +.|...+-. .-.+..+.++++|.|...+
T Consensus 168 ~Gk~~~-G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~ 209 (506)
T 1dbg_A 168 TDKITF-DQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQ 209 (506)
T ss_dssp ECCCSS-SCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECC
T ss_pred ECCcCc-ceEEecCceeEeccCcccccccCCeEEeCcEEcccc
Confidence 864321 110 023333210 0023357899999998765
No 60
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=62.48 E-value=10 Score=39.05 Aligned_cols=65 Identities=9% Similarity=0.246 Sum_probs=37.4
Q ss_pred cceEeecCcce-eeeccEEEeccc----eeeecceeEeeeeeeeeeCCCCCCceeEEecCCCCC---CCCceEEEEccEE
Q 008485 379 QDTLYTHSLRQ-FYRECDIYGTVD----FIFGNAAVVLQNCNIYPRLPMSGQFNAITAQGRTDP---NQNTGTSIHNCTI 450 (564)
Q Consensus 379 QDTL~~~~~r~-~~~~C~I~G~vD----FIfG~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~---~~~~G~vf~~c~i 450 (564)
-|.+.+...++ +..+|.|+-..| +..+.....+++|.|.... ++.+. |..+. +....+.|+++.|
T Consensus 150 ~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f~~H~-----k~~l~--G~sd~~~~d~~~~vT~~~N~f 222 (346)
T 1pxz_A 150 GDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHH-----KVMLL--GHDDTYDDDKSMKVTVAFNQF 222 (346)
T ss_dssp CCSEEEESCEEEEEESCEEECCSSEEEEEESSCEEEEEESCEEESEE-----EEEEE--SCCSSCGGGGGCEEEEESCEE
T ss_pred CCEEEEecCceEEEEeeEEecCCCCcEeeccCcceEEEEeeEEecCC-----ceeEE--CCCCccccCCceEEEEEeeEE
Confidence 35666654444 688888885544 3345566788888887321 22222 32221 1123577888887
No 61
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=61.95 E-value=68 Score=36.32 Aligned_cols=20 Identities=0% Similarity=-0.137 Sum_probs=10.3
Q ss_pred CceEEEeCccccccceEeec
Q 008485 366 DLSTFYSCSFEAYQDTLYTH 385 (564)
Q Consensus 366 d~~~f~~C~~~g~QDTL~~~ 385 (564)
.++.++||.|.+.+-.|.+.
T Consensus 234 ~NVtV~Nc~~~nT~nGIRIK 253 (772)
T 3gqn_A 234 RHVVLSNNRSKGCYGGIEIK 253 (772)
T ss_dssp EEEEEEEEEEESSSEEEEEC
T ss_pred ccEEEEceEEECCCcEEEEE
Confidence 34555555555555555443
No 62
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=59.86 E-value=36 Score=34.62 Aligned_cols=112 Identities=15% Similarity=0.175 Sum_probs=74.6
Q ss_pred EEcCC-eEEEeeEEeeCCC-----CcccceeeEecCCCceEEEeCccccccceEeecCcce-eeeccEEEeccceeeecc
Q 008485 335 VVAPK-FVAVNITIRNTAG-----AIKHQAVALRNGADLSTFYSCSFEAYQDTLYTHSLRQ-FYRECDIYGTVDFIFGNA 407 (564)
Q Consensus 335 v~~~~-f~~~~lt~~Nt~g-----~~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~~~~~r~-~~~~C~I~G~vDFIfG~~ 407 (564)
...++ ++++|++|.|..+ ..+...+-+ .+.++.+.||.|...-|-+-+.+++. .+++|++.+.--+-+|.-
T Consensus 125 ~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi--~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisIGS~ 202 (335)
T 1k5c_A 125 GPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV--SANNVTIQNCIVKNQDDCIAINDGNNIRFENNQCSGGHGISIGSI 202 (335)
T ss_dssp EEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE--ECSSEEEESCEEESSSCSEEEEEEEEEEEESCEEESSCCEEEEEE
T ss_pred EccCCeEEEEEEEEECCCCcccccCCCCCeEcc--cCCeEEEEeeEEEcCCCEEEeeCCeeEEEEEEEEECCccCeEeec
Confidence 34577 9999999999743 112333444 78899999999998788888887765 789999997555656532
Q ss_pred -------eeEeeeeeeeeeCCCCCCceeEE-ecCCCCCCCCceEEEEccEEeec
Q 008485 408 -------AVVLQNCNIYPRLPMSGQFNAIT-AQGRTDPNQNTGTSIHNCTIRAS 453 (564)
Q Consensus 408 -------~a~f~~c~i~~~~~~~~~~~~it-A~gr~~~~~~~G~vf~~c~i~~~ 453 (564)
...|+||++.... ..-.|- .+||. +..-..+.|+|.++...
T Consensus 203 g~~~~v~nV~v~n~~~~~t~----~girIKt~~g~~-~G~v~nI~f~ni~~~~v 251 (335)
T 1k5c_A 203 ATGKHVSNVVIKGNTVTRSM----YGVRIKAQRTAT-SASVSGVTYDANTISGI 251 (335)
T ss_dssp CTTCEEEEEEEESCEEEEEE----EEEEEEEETTCC-SCEEEEEEEESCEEEEE
T ss_pred cCCCCEEEEEEEeeEEECCC----ceEEEEEeCCCC-cceEeeeEEEEEEEEcc
Confidence 3468888887421 111232 23332 12235678999888764
No 63
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A*
Probab=48.60 E-value=0.93 Score=48.30 Aligned_cols=93 Identities=16% Similarity=0.043 Sum_probs=66.6
Q ss_pred EEcCCCCCCcccHHHHHHhCCCCCCCCCc----eEEEEEcCcEEeeeEEEEecCcceEEeecCC---cceEEeccccccC
Q 008485 251 TVSQDGSGNFTTITDAINVAPNNTDVTNG----YFLIYITAGVYEEYISISKNKKNLMIIGDGI---NQTVITGNRSVVD 323 (564)
Q Consensus 251 ~V~~dg~g~f~TIq~Ai~aa~~~~~~~~~----~~~I~I~~G~Y~E~v~I~~~~~~Itl~G~g~---~~tiI~~~~~~~~ 323 (564)
.|+.+..|.+ +|+|.+.++-.+.. .. .+.+-|++|+|+|+|.|+.+++++++.|-+. +.|.|+++..
T Consensus 295 ~~~~~~~g~~--~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 368 (432)
T 1vcl_A 295 MVGCDQNGKV--SQQISNTISFSSTV-TAGVAVEVSSTIEKGVIFAKATVSVKVTASLSKAWTNSQSGTTAITYTCD--- 368 (432)
T ss_dssp EEEEETTSCC--EEEECCEEECSSCC-CHHHHHHHHHHHHHCCEETTEECCHHHHHHHHHHHHTTCSCCCCEEEECC---
T ss_pred ccccCCCCcE--EEeccceEEEeccc-cccEEEEEEEeeccceEEEEEEeecccchhhhhhhccCCCCcEEEEEecC---
Confidence 3454555665 46666666554221 11 1267899999999999999999999988653 3478888753
Q ss_pred CcccccceeEEEEcCCeEEEeeEEeeCCC
Q 008485 324 GWTTFNSATFAVVAPKFVAVNITIRNTAG 352 (564)
Q Consensus 324 g~~t~~sat~~v~~~~f~~~~lt~~Nt~g 352 (564)
.+.++++.+.|-.|++++-|-|-.++
T Consensus 369 ---~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (432)
T 1vcl_A 369 ---NYDSDEEFTRGCMWQLAIETTEVKSG 394 (432)
T ss_dssp ---BCTTSSBCSSEEEEEEEEEEEETTTT
T ss_pred ---CCcccChhhccceEEEeeeeeecccC
Confidence 24568888999999999999876654
No 64
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=48.37 E-value=44 Score=36.90 Aligned_cols=13 Identities=8% Similarity=0.235 Sum_probs=6.7
Q ss_pred HHcccchhccccC
Q 008485 536 DAANFTVSNFLLG 548 (564)
Q Consensus 536 ea~~ft~~~fi~g 548 (564)
.|..|.....|.|
T Consensus 446 ~~~~y~~~~~~~g 458 (609)
T 3gq8_A 446 SSIGYPTVARVAG 458 (609)
T ss_dssp EEESCSEEEEETT
T ss_pred EeeccccceEEcc
Confidence 4555555555544
No 65
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=47.08 E-value=1e+02 Score=33.68 Aligned_cols=80 Identities=9% Similarity=-0.039 Sum_probs=55.5
Q ss_pred EcCCe--EEEeeEEeeCCCCcccceeeEecCCCceEEEeCccccccceEeecCcceeeeccEEEeccc---eeeec----
Q 008485 336 VAPKF--VAVNITIRNTAGAIKHQAVALRNGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVD---FIFGN---- 406 (564)
Q Consensus 336 ~~~~f--~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~f~~C~~~g~QDTL~~~~~r~~~~~C~I~G~vD---FIfG~---- 406 (564)
..+++ +++|+++.+..+. +.=++.+. .++.+.||.|...=|-+.+.+..-.+++|++.+.-. .-+|.
T Consensus 354 ~c~nV~~~I~nv~i~~~~~~---nTDGIDi~-~NV~I~nc~I~~gDDcIaIks~NI~I~nc~i~~g~g~g~IsIGS~~g~ 429 (574)
T 1ogo_X 354 GNSGISSQISDYKQVGAFFF---QTDGPEIY-PNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRD 429 (574)
T ss_dssp SSSCEEEEEEEEEEECCCST---TCCCCBCC-TTCEEEEEEEEESSCSEECCSTTCEEEEEEEEECSSSCSEECCSSCCC
T ss_pred CCCChhhEEEeeEeeCCCCC---CCccCccc-CCEEEEeeEEECCCCEEEECCccEEEEeEEEECCCCCceEEEcCCCCc
Confidence 46778 8999998864332 13345666 889999999998888887777566889999874321 22342
Q ss_pred -ceeEeeeeeeeee
Q 008485 407 -AAVVLQNCNIYPR 419 (564)
Q Consensus 407 -~~a~f~~c~i~~~ 419 (564)
....|+||+|...
T Consensus 430 V~NV~v~N~~i~~~ 443 (574)
T 1ogo_X 430 ISGVTIDTLNVIHT 443 (574)
T ss_dssp EEEEEEEEEEEEEC
T ss_pred EEEEEEEeEEEECC
Confidence 3457899998653
No 66
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=42.44 E-value=94 Score=32.56 Aligned_cols=22 Identities=9% Similarity=0.086 Sum_probs=16.8
Q ss_pred ceeEEEE--cCCeEEEeeEEeeCC
Q 008485 330 SATFAVV--APKFVAVNITIRNTA 351 (564)
Q Consensus 330 sat~~v~--~~~f~~~~lt~~Nt~ 351 (564)
.|-+.|. ++.+.++|+.|++..
T Consensus 161 dAGI~v~~~~d~~~I~nn~i~~~~ 184 (410)
T 2inu_A 161 KTGIEVASDNDSFHITGMGFVYLE 184 (410)
T ss_dssp CEEEEECSCEESCEEESCEEESCS
T ss_pred ceeEEEeccCCeEEEECCEEeccc
Confidence 4556665 788999999999864
No 67
>3dxr_B Mitochondrial import inner membrane translocase subunit TIM10; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=23.37 E-value=3.1e+02 Score=22.52 Aligned_cols=33 Identities=9% Similarity=0.024 Sum_probs=28.1
Q ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 008485 93 TLSTTAIRALEDCRLLAGFNMDFLLSSFETVNS 125 (564)
Q Consensus 93 ~~d~~~k~AL~DC~el~~daid~L~~S~~~l~~ 125 (564)
.++..+..|++.|++-|-++-..+.+.+..+..
T Consensus 55 ~L~~~E~~Ci~~Cv~Ky~d~~~~V~~~~q~~~q 87 (95)
T 3dxr_B 55 ELNKNESSCLDRCVAKYFETNVQVGENMQKMGQ 87 (95)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999999999888887653
No 68
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=22.21 E-value=1.3e+02 Score=22.61 Aligned_cols=31 Identities=13% Similarity=0.093 Sum_probs=26.4
Q ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008485 93 TLSTTAIRALEDCRLLAGFNMDFLLSSFETV 123 (564)
Q Consensus 93 ~~d~~~k~AL~DC~el~~daid~L~~S~~~l 123 (564)
.++..+..|++.|.+-|-++-..+.+.+..+
T Consensus 33 ~L~~~E~~Ci~~Cv~ky~~~~~~v~~~~~~~ 63 (64)
T 3cjh_B 33 NLSSQEEQCLSNCVNRFLDTNIRIVNGLQNT 63 (64)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCChhHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4788999999999999999988887776643
No 69
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=21.23 E-value=1.4e+02 Score=31.62 Aligned_cols=79 Identities=16% Similarity=0.098 Sum_probs=51.9
Q ss_pred EEEcCCeEEEeeEEeeCCCCcccceee-Ee-cCCCceEEEeCccccccceEeecCc-------------ceeeeccEEEe
Q 008485 334 AVVAPKFVAVNITIRNTAGAIKHQAVA-LR-NGADLSTFYSCSFEAYQDTLYTHSL-------------RQFYRECDIYG 398 (564)
Q Consensus 334 ~v~~~~f~~~~lt~~Nt~g~~~~qAvA-l~-~~~d~~~f~~C~~~g~QDTL~~~~~-------------r~~~~~C~I~G 398 (564)
.+..+++.++|++|.|... .++ .. -...++.+.||.|.| .+.|....+ .-.|+||.+++
T Consensus 171 ~i~s~nV~I~n~~I~~gdd-----giGs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~n 244 (464)
T 1h80_A 171 LHWSRNGIIERIKQNNALF-----GYGLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRCSK 244 (464)
T ss_dssp EEEEEEEEEEEEEEESCCT-----TCEEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEES
T ss_pred eeeccCEEEeceEEecCCC-----eEEecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEEEC
Confidence 4567788888888887632 123 22 245789999999999 777766543 12799999986
Q ss_pred ccc-eeeec-----ceeEeeeeeeee
Q 008485 399 TVD-FIFGN-----AAVVLQNCNIYP 418 (564)
Q Consensus 399 ~vD-FIfG~-----~~a~f~~c~i~~ 418 (564)
.-- ++++. ....|+|.+...
T Consensus 245 v~~~I~I~p~~~~isnItfeNI~~t~ 270 (464)
T 1h80_A 245 GLAAVMFGPHFMKNGDVQVTNVSSVS 270 (464)
T ss_dssp SSEEEEEECTTCBCCCEEEEEEEEES
T ss_pred CceeEEEeCCCceEeEEEEEEEEEEc
Confidence 422 44452 346677766653
Done!