Your job contains 1 sequence.
>008489
MALLLLRNRKASALGIPRILRDNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGMKKFDFT
DLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKR
LNKANVSCDLITGQEREEVDGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTR
ALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTG
DCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDA
IGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDL
PLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAKLSENYFFANC
EEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIVQLREIFTP
GTLQVPKTQAALRELESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEEFLERL
GWQKPRVKKVTPRPKLNSAVVSRC
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008489
(564 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2130235 - symbol:ATSUV3 species:3702 "Arabidop... 1976 3.0e-204 1
TAIR|locus:2151911 - symbol:AT5G39840 species:3702 "Arabi... 1055 1.2e-106 1
RGD|1305565 - symbol:Supv3l1 "suppressor of var1, 3-like ... 1020 6.0e-103 1
MGI|MGI:2441711 - symbol:Supv3l1 "suppressor of var1, 3-l... 1018 9.8e-103 1
UNIPROTKB|F1SUG1 - symbol:SUPV3L1 "Uncharacterized protei... 1016 1.6e-102 1
UNIPROTKB|E1BTJ2 - symbol:SUPV3L1 "ATP-dependent RNA heli... 1015 2.0e-102 1
UNIPROTKB|F1NMV4 - symbol:SUPV3L1 "ATP-dependent RNA heli... 1015 2.0e-102 1
UNIPROTKB|Q5ZJT0 - symbol:SUPV3L1 "ATP-dependent RNA heli... 1015 2.0e-102 1
UNIPROTKB|Q8IYB8 - symbol:SUPV3L1 "ATP-dependent RNA heli... 1014 2.6e-102 1
UNIPROTKB|F1PNI9 - symbol:SUPV3L1 "Uncharacterized protei... 1003 3.8e-101 1
ZFIN|ZDB-GENE-030131-2838 - symbol:supv3l1 "suppressor of... 968 2.0e-97 1
FB|FBgn0037232 - symbol:CG9791 species:7227 "Drosophila m... 923 1.1e-92 1
DICTYBASE|DDB_G0278937 - symbol:DDB_G0278937 "ATP-depende... 919 3.0e-92 1
WB|WBGene00007444 - symbol:C08F8.2 species:6239 "Caenorha... 913 1.3e-91 1
UNIPROTKB|Q17828 - symbol:C08F8.2 "ATP-dependent RNA heli... 913 1.3e-91 1
UNIPROTKB|Q61SU7 - symbol:CBG06022 "ATP-dependent RNA hel... 904 1.2e-90 1
UNIPROTKB|G4MUT4 - symbol:MGG_01682 "ATP-dependent RNA he... 720 1.7e-90 2
UNIPROTKB|Q295E6 - symbol:GA22038 "ATP-dependent RNA heli... 895 1.1e-89 1
UNIPROTKB|A6QP28 - symbol:SUPV3L1 "Uncharacterized protei... 829 1.0e-82 1
POMBASE|SPAC637.11 - symbol:rpm2 "mitochondrial ATP-depen... 819 1.2e-81 1
CGD|CAL0002663 - symbol:SUV3 species:5476 "Candida albica... 731 8.2e-81 3
UNIPROTKB|Q59TB2 - symbol:SUV3 "Putative uncharacterized ... 731 8.2e-81 3
SGD|S000005950 - symbol:SUV3 "ATP-dependent RNA helicase"... 807 2.2e-80 1
ASPGD|ASPL0000071675 - symbol:AN4723 species:162425 "Emer... 793 6.8e-79 1
GENEDB_PFALCIPARUM|PFF1140c - symbol:PFF1140c "ATP-depend... 291 1.5e-58 5
UNIPROTKB|C6KT73 - symbol:PFF1140c "ATP dependent DEAD-bo... 291 1.5e-58 5
UNIPROTKB|B1AR60 - symbol:SUPV3L1 "ATP-dependent RNA heli... 434 7.5e-41 1
TIGR_CMR|SPO_1417 - symbol:SPO_1417 "helicase, putative" ... 338 3.9e-27 2
FB|FBgn0039117 - symbol:tst "twister" species:7227 "Droso... 120 4.3e-06 2
SGD|S000004390 - symbol:SKI2 "Ski complex component and p... 125 6.5e-05 2
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ... 126 9.6e-05 2
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer... 128 0.00013 2
UNIPROTKB|F5H7B0 - symbol:SKIV2L "Helicase SKI2W" species... 127 0.00016 2
UNIPROTKB|F8VS23 - symbol:SKIV2L "Helicase SKI2W" species... 127 0.00016 2
UNIPROTKB|B4DM01 - symbol:SKIV2L "cDNA FLJ57529, highly s... 127 0.00018 2
UNIPROTKB|F8VNU1 - symbol:SKIV2L "Helicase SKI2W" species... 127 0.00018 2
UNIPROTKB|F5H6Y7 - symbol:SKIV2L "Helicase SKI2W" species... 127 0.00021 1
UNIPROTKB|F1LP39 - symbol:Skiv2l "Protein Skiv2l" species... 127 0.00022 2
RGD|1303059 - symbol:Skiv2l "superkiller viralicidic acti... 127 0.00024 2
UNIPROTKB|E1BMS0 - symbol:LOC100139548 "Uncharacterized p... 127 0.00024 2
UNIPROTKB|E2RSD6 - symbol:SKIV2L "Uncharacterized protein... 127 0.00024 2
UNIPROTKB|Q15477 - symbol:SKIV2L "Helicase SKI2W" species... 127 0.00024 2
UNIPROTKB|F1RQW4 - symbol:SKIV2L "Uncharacterized protein... 127 0.00024 2
DICTYBASE|DDB_G0277211 - symbol:DDB_G0277211 "superkiller... 128 0.00030 2
CGD|CAL0003794 - symbol:orf19.1335 species:5476 "Candida ... 116 0.00066 2
POMBASE|SPCC550.03c - symbol:SPCC550.03c "Ski complex RNA... 119 0.00079 2
WB|WBGene00012342 - symbol:mtr-4 species:6239 "Caenorhabd... 113 0.00091 2
>TAIR|locus:2130235 [details] [associations]
symbol:ATSUV3 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM;IDA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016070 "RNA metabolic process" evidence=IDA]
[GO:0009561 "megagametogenesis" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
GO:GO:0005739 GO:GO:0005524 EMBL:CP002687 GO:GO:0009555
GO:GO:0003676 GO:GO:0009561 GO:GO:0016070 GO:GO:0004004
EMBL:AY139995 EMBL:BT008910 EMBL:AJ132843 IPI:IPI00542855
PIR:T52576 RefSeq:NP_193215.2 UniGene:At.509
ProteinModelPortal:Q9SMX1 SMR:Q9SMX1 PRIDE:Q9SMX1
EnsemblPlants:AT4G14790.1 GeneID:827134 KEGG:ath:AT4G14790
TAIR:At4g14790 InParanoid:Q9SMX1 OMA:ASQKSIC PhylomeDB:Q9SMX1
ProtClustDB:CLSN2687511 Genevestigator:Q9SMX1 Uniprot:Q9SMX1
Length = 571
Score = 1976 (700.6 bits), Expect = 3.0e-204, P = 3.0e-204
Identities = 383/550 (69%), Positives = 447/550 (81%)
Query: 1 MALLLLRNRKASALGIPRILR-DNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGM----- 54
MA ++R RK SALGI R+L+ D + + E G + V+ R+Y SG
Sbjct: 1 MAYSVVRLRKVSALGISRVLQADKGSLWRFHFEPEFGDLLRLGVLTRNYRKNSGSPKFDF 60
Query: 55 ------KKFDFTDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCG 108
KFDFTDLT PHTWYP+ARKK RKVILHVGPTNSGKT+ AL LE SSSG+YCG
Sbjct: 61 TGTGTTSKFDFTDLTCPHTWYPIARKKKRKVILHVGPTNSGKTYSALKHLEQSSSGVYCG 120
Query: 109 PLRLLAWEVAKRLNKANVSCDLITGQEREEVDGAKHRAVTVEMADVVSDYDCAVIDEIQM 168
PLRLLAWEVAKRLNKANV CDLITGQE++ V+GA H+AVTVEMADV S YDCA+IDEIQM
Sbjct: 121 PLRLLAWEVAKRLNKANVPCDLITGQEKDLVEGATHKAVTVEMADVTSVYDCAIIDEIQM 180
Query: 169 LGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLN 228
+GCK RGF+FTRALLGI A+ELHLCGDPA VPL++ IL+VTGDDV+V +YERLSPLVPL
Sbjct: 181 VGCKQRGFAFTRALLGIAADELHLCGDPAVVPLVEDILKVTGDDVEVHTYERLSPLVPLK 240
Query: 229 VPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDA 288
VP+ S S+I+TGDC+VTFSR IY KK IE GKHLCS+VYGSLPPETRT QATRFND
Sbjct: 241 VPVSSVSSIKTGDCLVTFSRKDIYAYKKTIERAGKHLCSVVYGSLPPETRTAQATRFNDE 300
Query: 289 SSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFP 348
+++FDVLVASDAIGMGLNLNISRIIFST++K+DG E RDLTV E+KQIAGRAGR+ SKFP
Sbjct: 301 TNDFDVLVASDAIGMGLNLNISRIIFSTLQKYDGSETRDLTVSEIKQIAGRAGRFQSKFP 360
Query: 349 VGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLEN 408
+GEVTCL EDLPLLH SL PSP+LE AGLFP FDL+ YS+ HP LY ILEHF+EN
Sbjct: 361 IGEVTCLHKEDLPLLHSSLKSPSPILERAGLFPTFDLLSGYSQAHPTHGLYQILEHFVEN 420
Query: 409 AKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSK 468
AKLS NYF +N E+++KVA ++D+LPL L EKYLF +SPVD+ND+IS QGL QFA N+SK
Sbjct: 421 AKLSSNYFISNVEDMMKVAAIVDELPLGLQEKYLFVVSPVDVNDEISGQGLAQFAQNFSK 480
Query: 469 KGIVQLREIFTPGTLQVPKTQAALRELESIHKVLDLYVWLSFRLEESFPDRELAASQKAI 528
GIV+LREI P ++VPKT L+ELESIHKVLDLYVWLS RLE+SFPDRE+AASQK+I
Sbjct: 481 AGIVRLREILAPDRVKVPKTPTELKELESIHKVLDLYVWLSLRLEDSFPDREVAASQKSI 540
Query: 529 CSMLIEEFLE 538
C++LIE+FLE
Sbjct: 541 CNLLIEQFLE 550
>TAIR|locus:2151911 [details] [associations]
symbol:AT5G39840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 IPI:IPI00521078
RefSeq:NP_198800.1 UniGene:At.55263 ProteinModelPortal:F4KFV7
SMR:F4KFV7 PRIDE:F4KFV7 EnsemblPlants:AT5G39840.1 GeneID:833980
KEGG:ath:AT5G39840 OMA:KVANMLE ArrayExpress:F4KFV7 Uniprot:F4KFV7
Length = 776
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 207/488 (42%), Positives = 314/488 (64%)
Query: 58 DFTDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEV 117
D DLT+P TW+P AR RK++ H GPTNSGKT+ AL R + +G+YC PLRLLA EV
Sbjct: 255 DTADLTKPATWFPFARAMKRKIVYHCGPTNSGKTYNALQRFMEAKNGLYCSPLRLLAMEV 314
Query: 118 AKRLNKANVSCDLITGQEREEVDGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFS 177
++N + C L+TGQE++ V A H + TVEM Y+ AV+DEIQM+ +RG +
Sbjct: 315 FDKVNALGIYCSLLTGQEKKYVPFANHVSCTVEMVSTDELYEVAVLDEIQMMADPSRGHA 374
Query: 178 FTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLV-PLNVPLGSFSN 236
+T+ALLG+ A+E+HLCGDP+ + +++++ TGD++ + YER PLV LG N
Sbjct: 375 WTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELVEEHYERFKPLVVEAKTLLGELKN 434
Query: 237 IQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLV 296
+++GDC+V FSR I+ +K AIE H C ++YG+LPPETR +QA FND +E+DVLV
Sbjct: 435 VKSGDCVVAFSRREIFEVKMAIEKHTNHRCCVIYGALPPETRRQQAKLFNDQENEYDVLV 494
Query: 297 ASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLD 356
ASDA+GMGLNLNI R++F ++ K++G ++ + +VKQIAGRAGR GS++P G T L
Sbjct: 495 ASDAVGMGLNLNIRRVVFYSLNKYNGDKIVPVAASQVKQIAGRAGRRGSRYPDGLTTTLH 554
Query: 357 SEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAKLSENYF 416
EDL L + L +P + GLFP F+ I +++ PD + +LEHF ++ +L +YF
Sbjct: 555 LEDLNYLIECLQQPFDEVTKVGLFPFFEQIELFAAQVPDMAFSNLLEHFGKHCRLDGSYF 614
Query: 417 FANCEEVLKVATVIDQLP-LRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIVQLR 475
+ V KVA +++++ L L +++ FC +PV++ + + L +FA++YS+ V +
Sbjct: 615 LCRHDHVKKVANMLEKVEGLSLEDRFNFCFAPVNIRNPRAMHNLYRFASSYSQNMPVNVA 674
Query: 476 EIFTPGTLQVPKTQAALRELESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEE 535
+ P + K+ A L +LES H++L +Y+WLS + EE+FP E + + L+ E
Sbjct: 675 -MGIPKSSA--KSDAQLLDLESRHQILSMYLWLSNQFEENFPFVEKVEAMATNIAELLGE 731
Query: 536 FLERLGWQ 543
L + W+
Sbjct: 732 SLSKASWK 739
>RGD|1305565 [details] [associations]
symbol:Supv3l1 "suppressor of var1, 3-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000958 "mitochondrial mRNA
catabolic process" evidence=IEA;ISO;ISS] [GO:0000962 "positive
regulation of mitochondrial RNA catabolic process"
evidence=IEA;ISO;ISS] [GO:0000965 "mitochondrial RNA 3'-end
processing" evidence=IEA;ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA;ISO;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO;ISS]
[GO:0005739 "mitochondrion" evidence=ISO;ISS] [GO:0005759
"mitochondrial matrix" evidence=ISO;ISS] [GO:0006310 "DNA
recombination" evidence=IEA;ISO;ISS] [GO:0006401 "RNA catabolic
process" evidence=ISO;ISS] [GO:0030307 "positive regulation of cell
growth" evidence=IEA;ISO;ISS] [GO:0032508 "DNA duplex unwinding"
evidence=ISO;ISS] [GO:0034458 "3'-5' RNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA;ISO;ISS] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA;ISO;ISS] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA;ISO;ISS] [GO:0045025 "mitochondrial
degradosome" evidence=IEA;ISO;ISS] [GO:0070584 "mitochondrion
morphogenesis" evidence=IEA;ISO;ISS] [GO:0070827 "chromatin
maintenance" evidence=IEA;ISO;ISS] [GO:2000827 "mitochondrial RNA
surveillance" evidence=ISO;ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 RGD:1305565 GO:GO:0005524 GO:GO:0005634 GO:GO:0043066
GO:GO:0030307 GO:GO:0005759 GO:GO:0003677 GO:GO:0042645
GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192 GO:GO:0003678
GO:GO:0004004 GO:GO:0070584 GO:GO:0000958 eggNOG:COG0513
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
HOGENOM:HOG000175283 CTD:6832 HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ
GO:GO:0034458 GO:GO:0035946 GO:GO:0035945 EMBL:BC089883
IPI:IPI00554250 RefSeq:NP_001012480.1 UniGene:Rn.19830
ProteinModelPortal:Q5EBA1 STRING:Q5EBA1 PRIDE:Q5EBA1 GeneID:294385
KEGG:rno:294385 UCSC:RGD:1305565 InParanoid:Q5EBA1 NextBio:638092
ArrayExpress:Q5EBA1 Genevestigator:Q5EBA1 Uniprot:Q5EBA1
Length = 776
Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
Identities = 214/488 (43%), Positives = 309/488 (63%)
Query: 60 TDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAK 119
+DL RP WYP AR RK+I H GPTNSGKT+ A+ R S++SG+YCGPL+LLA E+ +
Sbjct: 183 SDLRRPPNWYPEARAIQRKIIFHSGPTNSGKTYHAIQRYLSATSGVYCGPLKLLAHEIFE 242
Query: 120 RLNKANVSCDLITGQER--EEVDG--AKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRG 175
+ N A V CDL+TG+ER E +G A H + TVEM +V + Y+ AVIDEIQM+ RG
Sbjct: 243 KSNAAGVPCDLVTGEERLTVEPEGKQATHVSCTVEMCNVATPYEVAVIDEIQMIRDPARG 302
Query: 176 FSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFS 235
+++TRALLG+CA E+HLCG+ AA+ L+ ++L TG++V+VQ YERL+P+ L+ L S
Sbjct: 303 WAWTRALLGLCAEEVHLCGESAAIDLVTELLYTTGEEVEVQKYERLTPISVLDRALESLD 362
Query: 236 NIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVL 295
N++ GDCIV FS++ IY + + IE RG +++YGSLPP T+ QA +FND + +L
Sbjct: 363 NLRPGDCIVCFSKNDIYSVSRQIEIRGLE-SAVIYGSLPPGTKLAQARKFNDPNDPCKIL 421
Query: 296 VASDAIGMGLNLNISRIIFSTMKKFD----GV-ELRDLTVPEVKQIAGRAGRYGSKFPVG 350
VA+DAIGMGLNL+I RIIF ++ K G EL +T + QIAGRAGR+ S F G
Sbjct: 422 VATDAIGMGLNLSIRRIIFYSLIKPSINEKGEKELEPITTSQALQIAGRAGRFSSHFKEG 481
Query: 351 EVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAK 410
EVT + +DL LL + L P +++AGL P + I M++ P+++L +++ F++ A+
Sbjct: 482 EVTTMHRDDLALLKEILNRPVDPIQAAGLHPTAEQIEMFAYHLPETTLSNLIDIFVDFAQ 541
Query: 411 LSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKG 470
+ YF N ++ A +I +PL L +Y+FC +P++ L QFA YS+
Sbjct: 542 VDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRNE 601
Query: 471 ---IVQLREIFTPGTLQVPKTQAALRELESIHKVLDLYVWLSFRLEESFPDRELAASQKA 527
LR + L PK L +LE++H V DLY+WLS+R + FPD S +
Sbjct: 602 PLTFAWLRR-YIKWPLLPPKNIKDLMDLEAVHDVFDLYLWLSYRFIDMFPDSSFVRSLQK 660
Query: 528 ICSMLIEE 535
++I+E
Sbjct: 661 ELDVIIQE 668
>MGI|MGI:2441711 [details] [associations]
symbol:Supv3l1 "suppressor of var1, 3-like 1 (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic
process" evidence=ISO] [GO:0000962 "positive regulation of
mitochondrial RNA catabolic process" evidence=ISO] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=ISO] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0003725 "double-stranded RNA binding" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0005759 "mitochondrial
matrix" evidence=ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034458 "3'-5' RNA helicase activity"
evidence=ISO] [GO:0035945 "mitochondrial ncRNA surveillance"
evidence=ISO] [GO:0035946 "mitochondrial mRNA surveillance"
evidence=ISO] [GO:0042645 "mitochondrial nucleoid" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0045025 "mitochondrial degradosome" evidence=ISO]
[GO:0070584 "mitochondrion morphogenesis" evidence=ISO] [GO:0070827
"chromatin maintenance" evidence=ISO] [GO:2000827 "mitochondrial
RNA surveillance" evidence=ISO] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 MGI:MGI:2441711 GO:GO:0005524 GO:GO:0005634
GO:GO:0043066 GO:GO:0030307 GO:GO:0005759 GO:GO:0003677
GO:GO:0042645 GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192
GO:GO:0003678 GO:GO:0004004 GO:GO:0070584 GO:GO:0000958
eggNOG:COG0513 GO:GO:0045025 GO:GO:0000965 GO:GO:0000962
GO:GO:0070827 HOGENOM:HOG000175283 GeneTree:ENSGT00390000003100
OMA:ADMIQHI CTD:6832 HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ
GO:GO:0034458 GO:GO:0035946 GO:GO:0035945 EMBL:AJ968954
EMBL:BC049796 IPI:IPI00314919 RefSeq:NP_852088.1 UniGene:Mm.235898
ProteinModelPortal:Q80YD1 SMR:Q80YD1 STRING:Q80YD1
PhosphoSite:Q80YD1 PaxDb:Q80YD1 PRIDE:Q80YD1
Ensembl:ENSMUST00000020273 GeneID:338359 KEGG:mmu:338359
UCSC:uc007fhd.1 InParanoid:Q80YD1 NextBio:400135 Bgee:Q80YD1
CleanEx:MM_SUPV3L1 Genevestigator:Q80YD1 Uniprot:Q80YD1
Length = 779
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 214/488 (43%), Positives = 308/488 (63%)
Query: 60 TDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAK 119
+DL P WYP AR + RK+I H GPTNSGKT+ A+ R S++SG+YCGPL+LLA E+ +
Sbjct: 183 SDLRIPPNWYPEARARQRKIIFHSGPTNSGKTYHAIQRYLSATSGVYCGPLKLLAHEIFE 242
Query: 120 RLNKANVSCDLITGQER--EEVDG--AKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRG 175
+ N A V CDL+TG+ER E +G A H + TVEM +V + Y+ AVIDEIQM+ RG
Sbjct: 243 KSNAAGVPCDLVTGEERLTVEPEGKQATHVSCTVEMCNVATPYEVAVIDEIQMIRDPARG 302
Query: 176 FSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFS 235
+++TRALLG+CA E+HLCG+ AA+ L+ ++L TG++V+VQ YERL+P+ L+ L S
Sbjct: 303 WAWTRALLGLCAEEVHLCGESAAINLVSELLYTTGEEVEVQKYERLTPISVLDHALESLD 362
Query: 236 NIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVL 295
N+Q GDCIV FS++ IY + + IE RG +++YGSLPP T+ QA +FND + +L
Sbjct: 363 NLQPGDCIVCFSKNDIYSVSRQIEIRGLE-SAVIYGSLPPGTKLAQARKFNDPNDPCKIL 421
Query: 296 VASDAIGMGLNLNISRIIFSTMKKFD----GV-ELRDLTVPEVKQIAGRAGRYGSKFPVG 350
VA+DAIGMGLNL+I RIIF ++ K G EL +T + QIAGRAGR+ S F G
Sbjct: 422 VATDAIGMGLNLSIRRIIFYSLIKPSINEKGEKELEPITTSQALQIAGRAGRFSSHFKEG 481
Query: 351 EVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAK 410
+VT + +DL LL L P +++AGL P + I M++ P+++L +++ F++ A+
Sbjct: 482 QVTTMHRDDLALLKDILNRPVDPIQAAGLHPTAEQIEMFAYHLPETTLSNLIDIFVDFAQ 541
Query: 411 LSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKG 470
+ YF N ++ A +I +PL L +Y+FC +P++ L QFA YS+
Sbjct: 542 VDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRNE 601
Query: 471 ---IVQLREIFTPGTLQVPKTQAALRELESIHKVLDLYVWLSFRLEESFPDRELAASQKA 527
LR + L PK L +LE++H V DLY+WLS+R + FPD L S +
Sbjct: 602 PLTFAWLRR-YIKWPLLPPKNIKDLMDLEAVHDVFDLYLWLSYRFIDMFPDSSLVRSLQK 660
Query: 528 ICSMLIEE 535
+I+E
Sbjct: 661 ELDAIIQE 668
>UNIPROTKB|F1SUG1 [details] [associations]
symbol:SUPV3L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070827 "chromatin maintenance" evidence=IEA]
[GO:0070584 "mitochondrion morphogenesis" evidence=IEA] [GO:0045025
"mitochondrial degradosome" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA] [GO:0034458 "3'-5' RNA helicase
activity" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IEA] [GO:0000962
"positive regulation of mitochondrial RNA catabolic process"
evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0030307 GO:GO:0003677 GO:GO:0042645 GO:GO:0006310
GO:GO:0003725 GO:GO:0003678 GO:GO:0004004 GO:GO:0070584
GO:GO:0000958 GO:GO:0045025 GO:GO:0000965 GO:GO:0000962
GO:GO:0070827 GeneTree:ENSGT00390000003100 OMA:ADMIQHI CTD:6832
GO:GO:0034458 GO:GO:0035946 GO:GO:0035945 EMBL:CT737222
RefSeq:XP_001928933.1 UniGene:Ssc.16551 Ensembl:ENSSSCT00000011221
GeneID:100155960 KEGG:ssc:100155960 Uniprot:F1SUG1
Length = 789
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 214/481 (44%), Positives = 305/481 (63%)
Query: 60 TDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAK 119
+DL P WYP AR RK+I H GPTNSGKT+ A+ + S+ SG+YCGPL+LLA E+ +
Sbjct: 186 SDLRIPPNWYPEARAIQRKIIFHSGPTNSGKTYHAIQKYLSAKSGVYCGPLKLLAHEIFE 245
Query: 120 RLNKANVSCDLITGQEREEV--DG--AKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRG 175
+ N A V CDL+TG+ER V DG A H A TVEM V + Y+ AVIDEIQM+ RG
Sbjct: 246 KSNAAGVPCDLVTGEERVTVEPDGKQAAHVACTVEMCSVTTPYEVAVIDEIQMIKDPARG 305
Query: 176 FSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFS 235
+++TRALLG+CA E+HLCG+ AA+ L+ +++ TG+DV+V++Y+RL+P+ L+ L S
Sbjct: 306 WAWTRALLGLCAKEIHLCGESAAIDLVTELMYTTGEDVEVRTYKRLTPISVLDHALESLD 365
Query: 236 NIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVL 295
N++ GDCIV FS++ IY + + IE RG +++YGSLPP T+ QA +FND +L
Sbjct: 366 NLRPGDCIVCFSKNDIYSVSRQIEIRGLE-SAVIYGSLPPGTKLAQAKKFNDPDDPCKIL 424
Query: 296 VASDAIGMGLNLNISRIIF-STMKKF---DGV-ELRDLTVPEVKQIAGRAGRYGSKFPVG 350
VA+DAIGMGLNL+I RIIF S MK G E+ +T + QIAGRAGR+ SKF G
Sbjct: 425 VATDAIGMGLNLSIRRIIFYSLMKPSINEKGEREIEPITTSQALQIAGRAGRFSSKFKEG 484
Query: 351 EVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAK 410
EVT + EDL LL + L P +++AGL P + I M++ PD++L +++ F++ ++
Sbjct: 485 EVTTMHREDLNLLKEILSRPVDPIKAAGLHPTAEQIEMFAYHLPDTTLSNLIDIFVDFSQ 544
Query: 411 LSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKG 470
+ YF N ++ A +I +PL L +Y+FC +P++ L QFA YS+
Sbjct: 545 VDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRNE 604
Query: 471 IVQLREI--FTPGTLQVPKTQAALRELESIHKVLDLYVWLSFRLEESFPDRELAAS-QKA 527
+ + + L PK L +LE++H VLDLY+WLS+R + FPD L QK
Sbjct: 605 PLTFSWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSYRFIDMFPDASLVRDLQKQ 664
Query: 528 I 528
+
Sbjct: 665 L 665
>UNIPROTKB|E1BTJ2 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9031 "Gallus gallus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic
process" evidence=IEA] [GO:0000962 "positive regulation of
mitochondrial RNA catabolic process" evidence=IEA] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0030307 "positive regulation of
cell growth" evidence=IEA] [GO:0034458 "3'-5' RNA helicase
activity" evidence=IEA] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045025 "mitochondrial degradosome"
evidence=IEA] [GO:0070584 "mitochondrion morphogenesis"
evidence=IEA] [GO:0070827 "chromatin maintenance" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0030307 GO:GO:0003677 GO:GO:0042645 GO:GO:0006310
GO:GO:0003725 GO:GO:0003678 GO:GO:0004004 GO:GO:0000958
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
GeneTree:ENSGT00390000003100 OMA:ADMIQHI GO:GO:0034458
GO:GO:0035946 GO:GO:0035945 EMBL:AADN02028004 EMBL:AADN02028006
EMBL:AADN02027997 EMBL:AADN02027998 EMBL:AADN02027999
EMBL:AADN02028000 EMBL:AADN02028001 EMBL:AADN02028002
EMBL:AADN02028003 EMBL:AADN02028005 IPI:IPI00576512
Ensembl:ENSGALT00000006679 ArrayExpress:E1BTJ2 Uniprot:E1BTJ2
Length = 796
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 218/519 (42%), Positives = 320/519 (61%)
Query: 22 DNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGMKKFDFTDLTRPHTWYPLARKKVRKVIL 81
D++ PF L K I F +D C ++K +DL P WYP AR RK+I
Sbjct: 146 DDLFPFFLRHAKQI--FPMLD------CMDD-LRKI--SDLRLPPNWYPEARAIQRKIIF 194
Query: 82 HVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQER----E 137
H GPTNSGKT+ A+ R S+ SGIYCGPL+LLA E+ ++ N ANV CDL+TG+ER E
Sbjct: 195 HAGPTNSGKTYHAIQRFLSAKSGIYCGPLKLLAHEIFQKSNAANVPCDLVTGEERVYASE 254
Query: 138 EVDGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPA 197
+ A H A T+EM + Y+ AVIDEIQM+ RG+++TRALLG+CA E+H+CG+ A
Sbjct: 255 DAKQASHIACTIEMCSTNTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEIHVCGEGA 314
Query: 198 AVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKA 257
A+ L+ +++ TG++V+V++Y+RL+PL L+ L S N+Q GDCIV FS++ IY + +
Sbjct: 315 AIDLVTELMYTTGEEVEVRNYKRLTPLTVLDYALESLDNLQPGDCIVCFSKNDIYSVSRQ 374
Query: 258 IESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFS-- 315
IE+RG C+++YGSLPP T+ QA +FND + +LVA+DAIGMGLNL I RIIF+
Sbjct: 375 IEARGLE-CAVIYGSLPPGTKLEQAKKFNDPNDPCKILVATDAIGMGLNLCIKRIIFNSI 433
Query: 316 ---TMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSP 372
T+ + E+ +T + QIAGRAGR+GS F GEVT + +DL L + L E P
Sbjct: 434 VKPTVNEKGEKEIDSITTSQALQIAGRAGRFGSSFKQGEVTAMHRDDLLQLKEILSEAVP 493
Query: 373 MLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQ 432
+++AGL P + I M++ PD++L +++ F+ +++ YF N ++ +A +I
Sbjct: 494 PVKAAGLHPTPEQIEMFAYHLPDATLSNLIDIFVSLSQVDGLYFVCNIDDFKFLADMIQH 553
Query: 433 LPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIVQLREI--FTPGTLQVPKTQA 490
+PL L +Y+FC +P++ + L +FA +S+ + + T L PK
Sbjct: 554 IPLNLRSRYVFCTAPLNRKEPFVCTTLLKFARQFSRNEPLTFDWLCRHTKWPLAPPKNIK 613
Query: 491 ALRELESIHKVLDLYVWLSFRLEESFPDRELAAS-QKAI 528
L LE++H V DLY+WLS+R + FPD L QK +
Sbjct: 614 ELVHLEAVHDVFDLYLWLSYRFMDMFPDAALVRDIQKKL 652
>UNIPROTKB|F1NMV4 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9031 "Gallus gallus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00390000003100 IPI:IPI00818346
EMBL:AADN02028004 EMBL:AADN02028006 EMBL:AADN02027997
EMBL:AADN02027998 EMBL:AADN02027999 EMBL:AADN02028000
EMBL:AADN02028001 EMBL:AADN02028002 EMBL:AADN02028003
EMBL:AADN02028005 Ensembl:ENSGALT00000040774 ArrayExpress:F1NMV4
Uniprot:F1NMV4
Length = 794
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 218/519 (42%), Positives = 320/519 (61%)
Query: 22 DNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGMKKFDFTDLTRPHTWYPLARKKVRKVIL 81
D++ PF L K I F +D C ++K +DL P WYP AR RK+I
Sbjct: 144 DDLFPFFLRHAKQI--FPMLD------CMDD-LRKI--SDLRLPPNWYPEARAIQRKIIF 192
Query: 82 HVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQER----E 137
H GPTNSGKT+ A+ R S+ SGIYCGPL+LLA E+ ++ N ANV CDL+TG+ER E
Sbjct: 193 HAGPTNSGKTYHAIQRFLSAKSGIYCGPLKLLAHEIFQKSNAANVPCDLVTGEERVYASE 252
Query: 138 EVDGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPA 197
+ A H A T+EM + Y+ AVIDEIQM+ RG+++TRALLG+CA E+H+CG+ A
Sbjct: 253 DAKQASHIACTIEMCSTNTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEIHVCGEGA 312
Query: 198 AVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKA 257
A+ L+ +++ TG++V+V++Y+RL+PL L+ L S N+Q GDCIV FS++ IY + +
Sbjct: 313 AIDLVTELMYTTGEEVEVRNYKRLTPLTVLDYALESLDNLQPGDCIVCFSKNDIYSVSRQ 372
Query: 258 IESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFS-- 315
IE+RG C+++YGSLPP T+ QA +FND + +LVA+DAIGMGLNL I RIIF+
Sbjct: 373 IEARGLE-CAVIYGSLPPGTKLEQAKKFNDPNDPCKILVATDAIGMGLNLCIKRIIFNSI 431
Query: 316 ---TMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSP 372
T+ + E+ +T + QIAGRAGR+GS F GEVT + +DL L + L E P
Sbjct: 432 VKPTVNEKGEKEIDSITTSQALQIAGRAGRFGSSFKQGEVTAMHRDDLLQLKEILSEAVP 491
Query: 373 MLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQ 432
+++AGL P + I M++ PD++L +++ F+ +++ YF N ++ +A +I
Sbjct: 492 PVKAAGLHPTPEQIEMFAYHLPDATLSNLIDIFVSLSQVDGLYFVCNIDDFKFLADMIQH 551
Query: 433 LPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIVQLREI--FTPGTLQVPKTQA 490
+PL L +Y+FC +P++ + L +FA +S+ + + T L PK
Sbjct: 552 IPLNLRSRYVFCTAPLNRKEPFVCTTLLKFARQFSRNEPLTFDWLCRHTKWPLAPPKNIK 611
Query: 491 ALRELESIHKVLDLYVWLSFRLEESFPDRELAAS-QKAI 528
L LE++H V DLY+WLS+R + FPD L QK +
Sbjct: 612 ELVHLEAVHDVFDLYLWLSYRFMDMFPDAALVRDIQKKL 650
>UNIPROTKB|Q5ZJT0 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9031 "Gallus gallus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic process"
evidence=ISS] [GO:0000962 "positive regulation of mitochondrial RNA
catabolic process" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0006401 "RNA catabolic process" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0070584 "mitochondrion morphogenesis"
evidence=ISS] [GO:0070827 "chromatin maintenance" evidence=ISS]
[GO:0003725 "double-stranded RNA binding" evidence=ISS] [GO:0034458
"3'-5' RNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0045025
"mitochondrial degradosome" evidence=ISS] [GO:0035946
"mitochondrial mRNA surveillance" evidence=ISS] [GO:2000827
"mitochondrial RNA surveillance" evidence=ISS] [GO:0035945
"mitochondrial ncRNA surveillance" evidence=ISS] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=ISS] [GO:0030307
"positive regulation of cell growth" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003677
"DNA binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0043066
GO:GO:0030307 GO:GO:0005759 GO:GO:0003677 GO:GO:0042645
GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192 GO:GO:0003678
GO:GO:0004004 GO:GO:0070584 GO:GO:0000958 eggNOG:COG0513
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
HOGENOM:HOG000175283 EMBL:AJ720354 IPI:IPI00818346
RefSeq:NP_001006498.1 UniGene:Gga.22594 ProteinModelPortal:Q5ZJT0
STRING:Q5ZJT0 GeneID:423697 KEGG:gga:423697 CTD:6832
HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ NextBio:20826130 GO:GO:0034458
GO:GO:0035946 GO:GO:0035945 Uniprot:Q5ZJT0
Length = 794
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 218/519 (42%), Positives = 320/519 (61%)
Query: 22 DNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGMKKFDFTDLTRPHTWYPLARKKVRKVIL 81
D++ PF L K I F +D C ++K +DL P WYP AR RK+I
Sbjct: 144 DDLFPFFLRHAKQI--FPMLD------CMDD-LRKI--SDLRLPPNWYPEARAIQRKIIF 192
Query: 82 HVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQER----E 137
H GPTNSGKT+ A+ R S+ SGIYCGPL+LLA E+ ++ N ANV CDL+TG+ER E
Sbjct: 193 HAGPTNSGKTYHAIQRFLSAKSGIYCGPLKLLAHEIFQKSNAANVPCDLVTGEERVYASE 252
Query: 138 EVDGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPA 197
+ A H A T+EM + Y+ AVIDEIQM+ RG+++TRALLG+CA E+H+CG+ A
Sbjct: 253 DAKQASHIACTIEMCSTNTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEIHVCGEGA 312
Query: 198 AVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKA 257
A+ L+ +++ TG++V+V++Y+RL+PL L+ L S N+Q GDCIV FS++ IY + +
Sbjct: 313 AIDLVTELMYTTGEEVEVRNYKRLTPLTVLDYALESLDNLQPGDCIVCFSKNDIYSVSRQ 372
Query: 258 IESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFS-- 315
IE+RG C+++YGSLPP T+ QA +FND + +LVA+DAIGMGLNL I RIIF+
Sbjct: 373 IEARGLE-CAVIYGSLPPGTKLEQAKKFNDPNDPCKILVATDAIGMGLNLCIKRIIFNSI 431
Query: 316 ---TMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSP 372
T+ + E+ +T + QIAGRAGR+GS F GEVT + +DL L + L E P
Sbjct: 432 VKPTVNEKGEKEIDSITTSQALQIAGRAGRFGSSFKQGEVTAMHRDDLLQLKEILSEAVP 491
Query: 373 MLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQ 432
+++AGL P + I M++ PD++L +++ F+ +++ YF N ++ +A +I
Sbjct: 492 PVKAAGLHPTPEQIEMFAYHLPDATLSNLIDIFVSLSQVDGLYFVCNIDDFKFLADMIQH 551
Query: 433 LPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIVQLREI--FTPGTLQVPKTQA 490
+PL L +Y+FC +P++ + L +FA +S+ + + T L PK
Sbjct: 552 IPLNLRSRYVFCTAPLNRKEPFVCTTLLKFARQFSRNEPLTFDWLCRHTKWPLAPPKNIK 611
Query: 491 ALRELESIHKVLDLYVWLSFRLEESFPDRELAAS-QKAI 528
L LE++H V DLY+WLS+R + FPD L QK +
Sbjct: 612 ELVHLEAVHDVFDLYLWLSYRFMDMFPDAALVRDIQKKL 650
>UNIPROTKB|Q8IYB8 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0045025 "mitochondrial degradosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006310 "DNA recombination" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0070827
"chromatin maintenance" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0006401 "RNA
catabolic process" evidence=IMP] [GO:0005759 "mitochondrial matrix"
evidence=IDA] [GO:0032508 "DNA duplex unwinding" evidence=IMP]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IMP] [GO:2000827 "mitochondrial RNA surveillance"
evidence=IMP] [GO:0035946 "mitochondrial mRNA surveillance"
evidence=IMP] [GO:0035945 "mitochondrial ncRNA surveillance"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0034458 "3'-5' RNA helicase activity"
evidence=IDA] [GO:0000962 "positive regulation of mitochondrial RNA
catabolic process" evidence=IMP;IDA] [GO:0000965 "mitochondrial RNA
3'-end processing" evidence=IMP] [GO:0030307 "positive regulation
of cell growth" evidence=IMP] [GO:0070584 "mitochondrion
morphogenesis" evidence=IMP] [GO:0000958 "mitochondrial mRNA
catabolic process" evidence=IMP] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0042645 "mitochondrial nucleoid" evidence=IDA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0043066 GO:GO:0030307 GO:GO:0003677 EMBL:CH471083
GO:GO:0042645 GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192
GO:GO:0003678 GO:GO:0004004 GO:GO:0070584 GO:GO:0000958
eggNOG:COG0513 GO:GO:0045025 EMBL:AL596223 GO:GO:0000965
GO:GO:0000962 GO:GO:0070827 HOGENOM:HOG000175283 OMA:ADMIQHI
CTD:6832 HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ GO:GO:0034458
GO:GO:0035946 GO:GO:0035945 EMBL:AF042169 EMBL:AK290416
EMBL:BC036112 IPI:IPI00412404 RefSeq:NP_003162.2 UniGene:Hs.106469
PDB:3RC3 PDB:3RC8 PDBsum:3RC3 PDBsum:3RC8 ProteinModelPortal:Q8IYB8
SMR:Q8IYB8 IntAct:Q8IYB8 STRING:Q8IYB8 PhosphoSite:Q8IYB8
DMDM:74759699 PaxDb:Q8IYB8 PeptideAtlas:Q8IYB8 PRIDE:Q8IYB8
DNASU:6832 Ensembl:ENST00000359655 GeneID:6832 KEGG:hsa:6832
UCSC:uc001jpe.1 GeneCards:GC10P070939 HGNC:HGNC:11471 HPA:HPA038405
MIM:605122 neXtProt:NX_Q8IYB8 PharmGKB:PA36257 InParanoid:Q8IYB8
ChEMBL:CHEMBL3642 GenomeRNAi:6832 NextBio:26671 ArrayExpress:Q8IYB8
Bgee:Q8IYB8 CleanEx:HS_SUPV3L1 Genevestigator:Q8IYB8 Uniprot:Q8IYB8
Length = 786
Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
Identities = 220/512 (42%), Positives = 318/512 (62%)
Query: 22 DNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGMKKFDFTDLTRPHTWYPLARKKVRKVIL 81
D++ PF L K I F +D C ++K +DL P WYP AR RK+I
Sbjct: 156 DDLFPFFLRHAKQI--FPVLD------CKDD-LRKI--SDLRIPPNWYPDARAMQRKIIF 204
Query: 82 HVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEV-- 139
H GPTNSGKT+ A+ + S+ SG+YCGPL+LLA E+ ++ N A V CDL+TG+ER V
Sbjct: 205 HSGPTNSGKTYHAIQKYFSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTGEERVTVQP 264
Query: 140 DG--AKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPA 197
+G A H + TVEM V + Y+ AVIDEIQM+ RG+++TRALLG+CA E+HLCG+PA
Sbjct: 265 NGKQASHVSCTVEMCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGEPA 324
Query: 198 AVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKA 257
A+ L+ +++ TG++V+V+ Y+RL+P+ L+ L S N++ GDCIV FS++ IY + +
Sbjct: 325 AIDLVMELMYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQ 384
Query: 258 IESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTM 317
IE RG +++YGSLPP T+ QA +FND + +LVA+DAIGMGLNL+I RIIF ++
Sbjct: 385 IEIRGLE-SAVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSL 443
Query: 318 KKFD----GV-ELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSP 372
K G EL +T + QIAGRAGR+ S+F GEVT ++ EDL LL + L P
Sbjct: 444 IKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVD 503
Query: 373 MLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQ 432
+ +AGL P + I M++ PD++L +++ F++ +++ YF N ++ A +I
Sbjct: 504 PIRAAGLHPTAEQIEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQH 563
Query: 433 LPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKG---IVQLREIFTPGTLQVPKTQ 489
+PL L +Y+FC +P++ L QFA YS+ LR + L PK
Sbjct: 564 IPLSLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRR-YIKWPLLPPKNI 622
Query: 490 AALRELESIHKVLDLYVWLSFRLEESFPDREL 521
L +LE++H VLDLY+WLS+R + FPD L
Sbjct: 623 KDLMDLEAVHDVLDLYLWLSYRFMDMFPDASL 654
>UNIPROTKB|F1PNI9 [details] [associations]
symbol:SUPV3L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00390000003100 OMA:ADMIQHI EMBL:AAEX03002786
Ensembl:ENSCAFT00000021963 Uniprot:F1PNI9
Length = 845
Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
Identities = 208/487 (42%), Positives = 307/487 (63%)
Query: 60 TDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAK 119
+DL P WYP AR RK+I H GPTNSGKT+ A+ + S+ SG+YCGPL+LLA E+ +
Sbjct: 242 SDLRIPPNWYPEARAIQRKIIFHSGPTNSGKTYHAIQKYLSAKSGVYCGPLKLLAHEIFE 301
Query: 120 RLNKANVSCDLITGQEREEV--DG--AKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRG 175
+ N A V CDL+TG+ER V DG A H A TVEM V + Y+ AVIDEIQM+ RG
Sbjct: 302 KSNAAGVPCDLVTGEERVTVGPDGKQAAHVACTVEMCSVTTPYEVAVIDEIQMIKDPARG 361
Query: 176 FSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFS 235
+++TRALLG+CA E+HLCG+ AA+ L+ +++ TG++V+V++Y+RL+P+ L+ L S
Sbjct: 362 WAWTRALLGLCAEEVHLCGESAAIDLVTELMYTTGEEVEVRNYKRLTPISVLDHALESLD 421
Query: 236 NIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVL 295
N++ GDCIV F+++ IY + + IE RG +++YGSLPP T+ QA +FND +L
Sbjct: 422 NLRPGDCIVCFNKNDIYSVSRQIEIRGLE-SAVIYGSLPPGTKLAQAKKFNDPDDPCKIL 480
Query: 296 VASDAIGMGLNLNISRIIF-----STMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVG 350
VA+DAIGMGLNL+I RIIF T+ + E+ +T + QIAGRAGR+ SK+ G
Sbjct: 481 VATDAIGMGLNLSIRRIIFYSLIKPTINEKGEKEIEPITTSQALQIAGRAGRFSSKYKEG 540
Query: 351 EVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAK 410
EVT ++ EDL LL + L P +++AGL P + I M++ PD++L +++ F++ ++
Sbjct: 541 EVTTMNREDLSLLKEILKRPVNPIKAAGLHPTAEQIEMFAYHLPDTTLSNLIDIFVDFSQ 600
Query: 411 LSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKG 470
+ YF N ++ A +I +PL L +Y+FC +P++ L QFA YS+
Sbjct: 601 VDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRNE 660
Query: 471 IVQLREI--FTPGTLQVPKTQAALRELESIHKVLDLYVWLSFRLEESFPDRELAAS-QKA 527
+ + + L PK L +LE++H VLDLY+WLS+R + FPD QK
Sbjct: 661 PLTFSWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSYRFIDMFPDANFIRDLQKE 720
Query: 528 ICSMLIE 534
+ ++ E
Sbjct: 721 LDGIIQE 727
>ZFIN|ZDB-GENE-030131-2838 [details] [associations]
symbol:supv3l1 "suppressor of var1, 3-like 1 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0001889 "liver development" evidence=IMP] [GO:0000958
"mitochondrial mRNA catabolic process" evidence=ISS] [GO:0003677
"DNA binding" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034458 "3'-5' RNA helicase activity" evidence=ISS] [GO:0070584
"mitochondrion morphogenesis" evidence=ISS] [GO:0070827 "chromatin
maintenance" evidence=ISS] [GO:0030307 "positive regulation of cell
growth" evidence=ISS] [GO:0000965 "mitochondrial RNA 3'-end
processing" evidence=ISS] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=ISS] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0000962 "positive regulation of mitochondrial RNA
catabolic process" evidence=ISS] [GO:0003725 "double-stranded RNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0035946
"mitochondrial mRNA surveillance" evidence=ISS] [GO:0045025
"mitochondrial degradosome" evidence=ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-2838
GO:GO:0005524 GO:GO:0001889 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00390000003100 OMA:ADMIQHI HOVERGEN:HBG108522
EMBL:BX546482 IPI:IPI00491012 UniGene:Dr.78491
Ensembl:ENSDART00000111774 Uniprot:B8A5H7
Length = 763
Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
Identities = 202/483 (41%), Positives = 302/483 (62%)
Query: 60 TDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAK 119
+DL P WYP AR RK++ H GPTNSGKT+ A+ R + SG+YCGPL+LLA E+ +
Sbjct: 181 SDLRVPANWYPEARAIQRKIVFHAGPTNSGKTYHAIKRYLEAKSGVYCGPLKLLAHEIYE 240
Query: 120 RLNKANVSCDLITGQEREEVD--G--AKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRG 175
+ N A V CDL+TG+ER VD G + H A T+EM V + Y+ AVIDEIQM+ RG
Sbjct: 241 KSNAAGVPCDLVTGEERIFVDPEGKPSGHIASTIEMCSVTTPYEVAVIDEIQMIKDPARG 300
Query: 176 FSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFS 235
+++TRALLG+CA E+H+CG+ AAV I +++ TG++V+V +Y+RL+P N + S
Sbjct: 301 WAWTRALLGLCAEEIHVCGEAAAVDFITELMFTTGEEVEVHNYKRLTPFSISNHAVESLD 360
Query: 236 NIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVL 295
N++ GDCIV FS++ IY + + IE RG C+++YGSLPP T+ QA +FND +L
Sbjct: 361 NLKPGDCIVCFSKNDIYSISRQIEIRGLE-CAVIYGSLPPGTKLAQAKKFNDPDDPCKIL 419
Query: 296 VASDAIGMGLNLNISRIIFSTMKKFD----GV-ELRDLTVPEVKQIAGRAGRYGSKFPVG 350
VA+DAIGMGLNL+I RIIF+++ K G E+ ++ + QIAGRAGR+ S F G
Sbjct: 420 VATDAIGMGLNLSIRRIIFNSLVKHSLNEKGEKEVDTISTSQALQIAGRAGRFSSVFKEG 479
Query: 351 EVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAK 410
EVT + +DLP+L + L +P + +AGL P + I M++ P ++L +++ F+ ++
Sbjct: 480 EVTTMHRDDLPVLKEILGKPVDPIATAGLHPTAEQIEMFAYHLPQATLSNLIDIFVSLSQ 539
Query: 411 LSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKG 470
+ YF N ++ +A +I +PL L +Y+FC +P++ +FA +S+
Sbjct: 540 VDGLYFVCNIDDFKFLADMIQHIPLNLRSRYVFCTAPINKKQPFVCTSFLKFARQFSRDE 599
Query: 471 IVQL----REIFTPGTLQVPKTQAALRELESIHKVLDLYVWLSFRLEESFPD-RELAASQ 525
+ R++ P L PK L LE++H VLDLY+WLS+R + FPD ++ Q
Sbjct: 600 PLTFNWVCRQVNWP--LSPPKNIKDLVHLEAVHDVLDLYLWLSYRFMDMFPDSNQIREIQ 657
Query: 526 KAI 528
K +
Sbjct: 658 KEL 660
>FB|FBgn0037232 [details] [associations]
symbol:CG9791 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
EMBL:AE014297 GO:GO:0005524 GO:GO:0005634 GO:GO:0005759
GO:GO:0003677 PROSITE:PS51192 GO:GO:0003678 eggNOG:COG0513
GeneTree:ENSGT00390000003100 OMA:ADMIQHI EMBL:AY058527
RefSeq:NP_649452.3 UniGene:Dm.4174 ProteinModelPortal:Q9VN03
SMR:Q9VN03 IntAct:Q9VN03 MINT:MINT-1742266 STRING:Q9VN03
PaxDb:Q9VN03 EnsemblMetazoa:FBtr0273009 GeneID:40543
KEGG:dme:Dmel_CG9791 UCSC:CG9791-RC FlyBase:FBgn0037232
InParanoid:Q9VN03 OrthoDB:EOG48KPS7 PhylomeDB:Q9VN03
GenomeRNAi:40543 NextBio:819279 Bgee:Q9VN03 Uniprot:Q9VN03
Length = 763
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 207/510 (40%), Positives = 305/510 (59%)
Query: 22 DNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGMKKFDFTDLTRPHTWYPLARKKVRKVIL 81
D++ P+ L K + F +D C +KK +DL +P WY AR RK++
Sbjct: 143 DDIFPYFLRHAKTV--FPHLD------CMDD-LKKI--SDLRQPANWYSNARAITRKIVF 191
Query: 82 HVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQERE---- 137
H GPTNSGKT+ A+ R S+ +G+YCGPL+LLA EV + N+ CDL+TG+ER+
Sbjct: 192 HAGPTNSGKTYHAMERYLSAKTGVYCGPLKLLATEVYNKANERGTPCDLVTGEERKFGIS 251
Query: 138 EVDGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPA 197
E A H A TVEM V + Y+ AVIDEIQ + RG+++TRA LG+ A+E+H+CG+P
Sbjct: 252 ESLPANHVACTVEMTSVNTPYEVAVIDEIQQIRDPQRGWAWTRAFLGLIADEVHVCGEPG 311
Query: 198 AVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKA 257
A+ L+Q+I + TG+ V+V+ Y+RL+ L N LGS NI GDCIV FS+H IY + +
Sbjct: 312 ALDLLQKICETTGETVEVRLYDRLTELTVENTALGSLDNIVPGDCIVCFSKHDIYTVSRE 371
Query: 258 IESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIF--- 314
IE+RGK + +++YG LPP T+ QA +FND ++ V+VA+DAIGMGLNL+I RIIF
Sbjct: 372 IEARGKEV-AVIYGGLPPGTKLAQAAKFNDPANSCKVMVATDAIGMGLNLSIRRIIFYSL 430
Query: 315 --STMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLE-PS 371
+M + E+ ++V QIAGRAGR+ +++ G VT SEDL L + L P
Sbjct: 431 IKPSMNERGEREIDTISVSSALQIAGRAGRFRTQWEHGYVTAFKSEDLQTLQRILARTPE 490
Query: 372 PMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAKLSEN-YFFANCEEVLKVATVI 430
P ++ AGL P D I +Y+ P SSL +++ F+ + ++ YF N E+ +A +I
Sbjct: 491 P-IKQAGLHPTADQIELYAYHLPSSSLSNLMDIFVNLCTVDDSLYFMCNIEDFKFLAEMI 549
Query: 431 DQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIVQLREIFTP-G-TLQVPKT 488
+ L L +Y+FC +P++ + A YS+ + I G ++PKT
Sbjct: 550 QHVALPLRARYVFCCAPINRKMPFVCSMFLKVARQYSRNEPITFDFIKKNCGWPFKLPKT 609
Query: 489 QAALRELESIHKVLDLYVWLSFRLEESFPD 518
L LE++ V+DLY+WLS+R + FP+
Sbjct: 610 ILDLVHLEAVFDVMDLYLWLSYRFMDLFPE 639
>DICTYBASE|DDB_G0278937 [details] [associations]
symbol:DDB_G0278937 "ATP-dependent RNA helicase
SUPV3L1, mitochondrial" species:44689 "Dictyostelium discoideum"
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0278937 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000024 GO:GO:0004386 eggNOG:COG0513 RefSeq:XP_641977.1
EnsemblProtists:DDB0218122 GeneID:8621709 KEGG:ddi:DDB_G0278937
InParanoid:Q54XQ3 ProtClustDB:CLSZ2846828 Uniprot:Q54XQ3
Length = 904
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 205/493 (41%), Positives = 286/493 (58%)
Query: 60 TDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAK 119
+DL PH WY ARK R +ILHVGPTNSGKT+ AL RL S SG+YCGPLRLLA EV
Sbjct: 386 SDLREPHKWYTEARKFKRNIILHVGPTNSGKTYNALKRLMESESGVYCGPLRLLAHEVYD 445
Query: 120 RLNKANVSCDLITGQEREEVDGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFT 179
++N+ + L+TGQ R + H + T+EM + AVIDE Q++ RG S+T
Sbjct: 446 KMNENGLDTSLMTGQLRINNPNSTHSSCTIEMVSTDKMVEVAVIDEFQLMSDTIRGQSWT 505
Query: 180 RALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQT 239
RA+LGI A ELHLCGD A+ L+++I ++TGD + + +YERLS LV P+ S +I+
Sbjct: 506 RAILGIPAVELHLCGDNTAIELVKKICEITGDTLTINNYERLSTLVIDEEPIASMGDIKK 565
Query: 240 GDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASD 299
GDC++ F + I K +E +G C++VYGSLPP TR +QA FN S DVL+A+D
Sbjct: 566 GDCLICFKKKDIIFYKNYLEKQGLK-CAVVYGSLPPTTRVQQAKLFNTDES-VDVLIATD 623
Query: 300 AIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSED 359
AIGMGLNLNI R+IF T+KK+DG R+L EVKQIAGRAGR+G+K+PVG VT +D
Sbjct: 624 AIGMGLNLNIGRVIFLTLKKYDGEVDRELYASEVKQIAGRAGRFGTKYPVGSVTTFTRKD 683
Query: 360 LPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLY--GILEHFLENAKLSENYFF 417
L + K P+ + + AG+ P I +S L +L +L F+EN + ++YF
Sbjct: 684 LAKIRKDWQSPNIISDRAGISPLSQQIEKFSLLPQCKNLKFSEVLTEFMENTNIDKHYFL 743
Query: 418 ANCEEVLKVATVIDQLPLRLHEKYLFCISPV-DMNDDISSQGLTQFATNYSKKGIVQL-- 474
N +E + +A + D + + +K+LF P+ + ++I + ++A YSK V L
Sbjct: 744 GNFQEFITIAQITDFTTMSVKDKFLFSQCPLSNSKNEIPTSHYIKYALGYSKDRKVNLGF 803
Query: 475 --------REIFTPGTLQVPKTQAALRELESIHKVLDLYVWLSFRLEESFPDRELAASQK 526
+ F K L LES + V D+Y+WLS F + A
Sbjct: 804 DIDKINNAEKRFNESPDDTKKFSEYLSTLESYYSVTDIYLWLSNYFPTHFIQVKNAIELS 863
Query: 527 AICSMLIEEFLER 539
+ S I LE+
Sbjct: 864 ELISQRISLVLEQ 876
>WB|WBGene00007444 [details] [associations]
symbol:C08F8.2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0005759 GO:GO:0003677 GO:GO:0000003 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 eggNOG:COG0513
EMBL:Z73103 HOGENOM:HOG000175283 PIR:T19103 RefSeq:NP_001040911.1
RefSeq:NP_001040912.1 UniGene:Cel.20693 ProteinModelPortal:Q17828
SMR:Q17828 STRING:Q17828 PaxDb:Q17828 EnsemblMetazoa:C08F8.2a
GeneID:178022 KEGG:cel:CELE_C08F8.2 UCSC:C08F8.2a CTD:178022
WormBase:C08F8.2a WormBase:C08F8.2b GeneTree:ENSGT00390000003100
InParanoid:Q17828 OMA:ADMIQHI NextBio:899396 Uniprot:Q17828
Length = 721
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 201/492 (40%), Positives = 292/492 (59%)
Query: 60 TDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAK 119
+DLTRPH WYP AR RK+ H GPTNSGKT+ AL R + S ++CGPL+LLA EV
Sbjct: 172 SDLTRPHNWYPEARSVTRKIFFHAGPTNSGKTYHALKRFGEAKSAVFCGPLKLLAAEVFH 231
Query: 120 RLNKANVSCDLITGQEREEV-DG---AKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRG 175
R N+ + CDL+TG+ER D ++H + TVEM + AVIDEIQML + RG
Sbjct: 232 RTNELGIPCDLVTGEERRFAKDNHHPSQHLSSTVEMLSTQMRVEVAVIDEIQMLRDEQRG 291
Query: 176 FSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFS 235
+++TRALLG A+E+HLCG+PAA+ +++++L+ G+ V+V+ YER SPL + + S+S
Sbjct: 292 WAWTRALLGAAADEIHLCGEPAAIDIVKKLLEPIGETVEVRYYERKSPLAIADKAIESYS 351
Query: 236 NIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVL 295
NI+ GDCIV FS+ +I+ K +E G +++YG LPP T+ QA +FND E +VL
Sbjct: 352 NIEPGDCIVCFSKRSIFFNSKKLEENGIKP-AVIYGDLPPGTKLAQAAKFNDPDDECNVL 410
Query: 296 VASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCL 355
VA+DAIGMGLNLNI R+IF++ + EL L QIAGRAGR+G+ + G T +
Sbjct: 411 VATDAIGMGLNLNIRRVIFNSCTR--QTEL--LPTYAALQIAGRAGRFGTAYANGVATTM 466
Query: 356 DSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAKLSENY 415
EDL L L E + + G+ P +D I +S P +S +L+ F+ +S+++
Sbjct: 467 RKEDLGTLKAILSEKIEPIANVGIAPTYDQIETFSFHLPQASFVRLLDLFVSVCSVSDHF 526
Query: 416 FFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIVQLR 475
F ++ ++A +IDQ+PL L +Y FC SP++ D +S + A +S G
Sbjct: 527 FICTVYDMRELAVLIDQIPLPLKVRYTFCTSPLNTEDKRTSAVFVKMARRFST-GQALTY 585
Query: 476 EIFTPGTLQVPKTQAALREL---ESIHKVLDLYVWLSFRLEESFPDR-ELAASQKAICSM 531
E PK L EL E +++LD Y+WLS R + PD + + K + SM
Sbjct: 586 EWLIDMLEWPPKPATTLNELSLLEQNYEILDQYMWLSMRFPDMLPDEPRVREASKHLDSM 645
Query: 532 L---IEEFLERL 540
+ +E F+ L
Sbjct: 646 IQEGVESFMSLL 657
>UNIPROTKB|Q17828 [details] [associations]
symbol:C08F8.2 "ATP-dependent RNA helicase SUV3 homolog,
mitochondrial" species:6239 "Caenorhabditis elegans" [GO:0032508
"DNA duplex unwinding" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0005759 GO:GO:0003677 GO:GO:0000003
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
eggNOG:COG0513 EMBL:Z73103 HOGENOM:HOG000175283 PIR:T19103
RefSeq:NP_001040911.1 RefSeq:NP_001040912.1 UniGene:Cel.20693
ProteinModelPortal:Q17828 SMR:Q17828 STRING:Q17828 PaxDb:Q17828
EnsemblMetazoa:C08F8.2a GeneID:178022 KEGG:cel:CELE_C08F8.2
UCSC:C08F8.2a CTD:178022 WormBase:C08F8.2a WormBase:C08F8.2b
GeneTree:ENSGT00390000003100 InParanoid:Q17828 OMA:ADMIQHI
NextBio:899396 Uniprot:Q17828
Length = 721
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 201/492 (40%), Positives = 292/492 (59%)
Query: 60 TDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAK 119
+DLTRPH WYP AR RK+ H GPTNSGKT+ AL R + S ++CGPL+LLA EV
Sbjct: 172 SDLTRPHNWYPEARSVTRKIFFHAGPTNSGKTYHALKRFGEAKSAVFCGPLKLLAAEVFH 231
Query: 120 RLNKANVSCDLITGQEREEV-DG---AKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRG 175
R N+ + CDL+TG+ER D ++H + TVEM + AVIDEIQML + RG
Sbjct: 232 RTNELGIPCDLVTGEERRFAKDNHHPSQHLSSTVEMLSTQMRVEVAVIDEIQMLRDEQRG 291
Query: 176 FSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFS 235
+++TRALLG A+E+HLCG+PAA+ +++++L+ G+ V+V+ YER SPL + + S+S
Sbjct: 292 WAWTRALLGAAADEIHLCGEPAAIDIVKKLLEPIGETVEVRYYERKSPLAIADKAIESYS 351
Query: 236 NIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVL 295
NI+ GDCIV FS+ +I+ K +E G +++YG LPP T+ QA +FND E +VL
Sbjct: 352 NIEPGDCIVCFSKRSIFFNSKKLEENGIKP-AVIYGDLPPGTKLAQAAKFNDPDDECNVL 410
Query: 296 VASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCL 355
VA+DAIGMGLNLNI R+IF++ + EL L QIAGRAGR+G+ + G T +
Sbjct: 411 VATDAIGMGLNLNIRRVIFNSCTR--QTEL--LPTYAALQIAGRAGRFGTAYANGVATTM 466
Query: 356 DSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAKLSENY 415
EDL L L E + + G+ P +D I +S P +S +L+ F+ +S+++
Sbjct: 467 RKEDLGTLKAILSEKIEPIANVGIAPTYDQIETFSFHLPQASFVRLLDLFVSVCSVSDHF 526
Query: 416 FFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIVQLR 475
F ++ ++A +IDQ+PL L +Y FC SP++ D +S + A +S G
Sbjct: 527 FICTVYDMRELAVLIDQIPLPLKVRYTFCTSPLNTEDKRTSAVFVKMARRFST-GQALTY 585
Query: 476 EIFTPGTLQVPKTQAALREL---ESIHKVLDLYVWLSFRLEESFPDR-ELAASQKAICSM 531
E PK L EL E +++LD Y+WLS R + PD + + K + SM
Sbjct: 586 EWLIDMLEWPPKPATTLNELSLLEQNYEILDQYMWLSMRFPDMLPDEPRVREASKHLDSM 645
Query: 532 L---IEEFLERL 540
+ +E F+ L
Sbjct: 646 IQEGVESFMSLL 657
>UNIPROTKB|Q61SU7 [details] [associations]
symbol:CBG06022 "ATP-dependent RNA helicase SUV3 homolog,
mitochondrial" species:6238 "Caenorhabditis briggsae" [GO:0003677
"DNA binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005759
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 eggNOG:COG0513 EMBL:HE600909 EnsemblMetazoa:CBG06022
WormBase:CBG06022 HOGENOM:HOG000175283 Uniprot:Q61SU7
Length = 721
Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
Identities = 195/486 (40%), Positives = 288/486 (59%)
Query: 60 TDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAK 119
+DLTRPH WYP AR +RK+ H GPTNSGKT+ AL R + S ++CGPL+LLA EV
Sbjct: 170 SDLTRPHNWYPEARSIIRKIFFHAGPTNSGKTYHALKRFGEAKSAVFCGPLKLLATEVFN 229
Query: 120 RLNKANVSCDLITGQEREEV-DG---AKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRG 175
R N + CDL+TG+ER D ++H + TVEM + VIDEIQML + RG
Sbjct: 230 RTNALGIPCDLVTGEERRFAKDNHHPSQHLSSTVEMLSTQMRVEVVVIDEIQMLRDEQRG 289
Query: 176 FSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFS 235
+++TRALLG A+E+HLCG+PAA+ +++++L+ G+ V+V+ Y+R SPL + + S+S
Sbjct: 290 WAWTRALLGAAADEIHLCGEPAAINIVKKLLEPIGETVEVRYYDRKSPLTIADRAIESYS 349
Query: 236 NIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVL 295
NI+ GDCIV FS+ A++ K +E G +++YG LPP T+ QA +FND E +VL
Sbjct: 350 NIEPGDCIVCFSKRAVFFNSKKLEENGIKP-AVIYGDLPPGTKLAQAAKFNDPDDECNVL 408
Query: 296 VASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCL 355
VA+DAIGMGLNLNI R+IF++ + EL L QIAGRAGR+G+ + G T +
Sbjct: 409 VATDAIGMGLNLNIRRVIFNSCTR--QTEL--LPTYAALQIAGRAGRFGTAYANGVATTM 464
Query: 356 DSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAKLSENY 415
EDL L L E + + G+ P +D I +S P +S +L+ F+ +S+++
Sbjct: 465 RKEDLGTLKTILAEKVEPITNVGIAPTYDQIETFSFHLPQASFVRLLDLFVSVCSVSDHF 524
Query: 416 FFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIVQLR 475
F ++ ++A +IDQ+PL L +Y FC SP++ +D ++ + A ++ G
Sbjct: 525 FICTVYDMRELAVLIDQVPLPLKVRYTFCTSPLNTDDKRTAAVFVKMARRFAT-GQALTY 583
Query: 476 EIFTPGTLQVPKTQAALREL---ESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSML 532
E PK + L EL E ++VLD Y+WLS R + PD I +
Sbjct: 584 EWLMDMLEWPPKPASTLSELSLLEQNYEVLDQYMWLSMRFPDMLPDEPRVRDASKILDKM 643
Query: 533 IEEFLE 538
I++ +E
Sbjct: 644 IQDGVE 649
>UNIPROTKB|G4MUT4 [details] [associations]
symbol:MGG_01682 "ATP-dependent RNA helicase SUV3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
EMBL:CM001232 RefSeq:XP_003714671.1 ProteinModelPortal:G4MUT4
EnsemblFungi:MGG_01682T0 GeneID:2679359 KEGG:mgr:MGG_01682
Uniprot:G4MUT4
Length = 757
Score = 720 (258.5 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 148/288 (51%), Positives = 192/288 (66%)
Query: 61 DLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKR 120
D P W+P R RK+ LHVGPTNSGKT+ AL LES+++G+Y GPLRLLA EV R
Sbjct: 183 DFQHPTEWFPGTRSMQRKIHLHVGPTNSGKTYNALKALESATTGVYAGPLRLLAHEVYTR 242
Query: 121 LNKANVSCDLITGQEREEVDGAKH--RAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSF 178
+ SC L+TG+E+ + + + TVEMA + + D AVIDEIQM+ RG+++
Sbjct: 243 MVAKGRSCALLTGEEQRWPEDTQSFISSCTVEMAPLNTVVDVAVIDEIQMIADPDRGWAW 302
Query: 179 TRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGS-FSNI 237
T+A+LGI A E+HLCG+ V LI+++ + GD+ V YERLSPL P+N LG +
Sbjct: 303 TQAVLGIQAREVHLCGEERTVDLIKRLAESMGDECIVHQYERLSPLEPMNSSLGGDLKKL 362
Query: 238 QTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVA 297
Q GD +V FSR ++ LK+ IE + C+IVYGSLPPETR QA FND +E+D +VA
Sbjct: 363 QKGDAVVAFSRIGLHALKRGIEKQTGKRCAIVYGSLPPETRAEQAALFNDPDNEYDYIVA 422
Query: 298 SDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGS 345
SDAIGMGLNL I R++F T KFDG E R L E+KQI GRAGR+ S
Sbjct: 423 SDAIGMGLNLEIRRVVFDTTNKFDGSERRFLGESEIKQIGGRAGRFRS 470
Score = 202 (76.2 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 58/212 (27%), Positives = 108/212 (50%)
Query: 340 AGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHP-DSSL 398
A R S+ VG VTC+D DL + K+ P +++AGL P +I +S D+ L
Sbjct: 486 ARRAVSRPSVGYVTCVDDGDLRRIQKAFEVEVPPIKAAGLLPPAAIIEKFSSYFAQDTPL 545
Query: 399 YGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDD----I 454
IL E + S++YF N ++ ++ A +I P+ + ++ + +P+D I
Sbjct: 546 SHILLKIREVVRTSDDYFVCNFDDWIEAADIIQAFPMPISDRLVLLSAPLDYKTKEFMRI 605
Query: 455 SSQGLTQFATNY--SKKGIVQLREIFTPGT-LQVPKTQAALRELESIHKVLDLYVWLSFR 511
++ +++ + S G+ +L + T + Q L +LE++HK L LY+WLS+R
Sbjct: 606 CAKCVSELKDGHLLSLDGL-ELEVLDVDDTCFNKYRAQEQLNKLETLHKCLILYLWLSYR 664
Query: 512 LEESFPDRELAASQKAICSMLIEEFLERLGWQ 543
+ F ++LA K++ I E L+++ ++
Sbjct: 665 YQGVFVSQDLAFHAKSLVEEKIRERLDKVDFR 696
>UNIPROTKB|Q295E6 [details] [associations]
symbol:GA22038 "ATP-dependent RNA helicase SUV3 homolog,
mitochondrial" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=ISS] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271
Pfam:PF12513 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005759 GO:GO:0003677 EMBL:CM000070
PROSITE:PS51192 GO:GO:0003678 eggNOG:COG0513 OMA:ADMIQHI
OrthoDB:EOG48KPS7 RefSeq:XP_001359616.1 ProteinModelPortal:Q295E6
GeneID:4802755 KEGG:dpo:Dpse_GA22038 FlyBase:FBgn0082022
InParanoid:Q295E6 Uniprot:Q295E6
Length = 762
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 206/521 (39%), Positives = 308/521 (59%)
Query: 22 DNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGMKKFDFTDLTRPHTWYPLARKKVRKVIL 81
D++ P+ L K + F +D C +KK +DL +P WY AR RK++
Sbjct: 143 DDIFPYFLRHAKTV--FPHLD------CMDD-LKKI--SDLRQPANWYTNARALTRKIVF 191
Query: 82 HVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQERE---- 137
H GPTNSGKT+ A+ R S+ +G+YCGPL+LLA EV + N+ CDL+TG+ER+
Sbjct: 192 HSGPTNSGKTYHAMERYLSAKTGVYCGPLKLLATEVYNKANERGTPCDLVTGEERKFGIS 251
Query: 138 EVDGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPA 197
+ A H A TVEM V + Y+ AVIDEIQ + RG+++TRA LG+ A+E+H+CG+
Sbjct: 252 DNSPANHVACTVEMTSVNTPYEVAVIDEIQQIRDPQRGWAWTRAFLGLIADEVHVCGEAG 311
Query: 198 AVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKA 257
A+ L+Q+I + TG+ V+V+ Y+RL+ L + LGS N+ GDCIV FS+H IY + +
Sbjct: 312 ALELLQKICETTGETVEVRRYDRLTELTVEDSALGSLDNVMPGDCIVCFSKHDIYTVSRE 371
Query: 258 IESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIF--- 314
IE+RGK + +++YG LPP T+ QA +FND ++ V+VA+DAIGMGLNL+I RIIF
Sbjct: 372 IEARGKEV-AVIYGGLPPGTKLAQAAKFNDPANSCKVMVATDAIGMGLNLSIRRIIFYSL 430
Query: 315 --STMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLE-PS 371
TM + E+ ++V QIAGRAGR+ +++ G VT SEDL L + L + P
Sbjct: 431 VKPTMNERGEREIDTISVSSALQIAGRAGRFRTQWEHGYVTAFKSEDLQTLQRILAQTPE 490
Query: 372 PMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENAKLSEN-YFFANCEEVLKVATVI 430
P L+ AGL P D I +Y+ P+SSL +++ F+ + ++ YF N E+ +A +I
Sbjct: 491 P-LKQAGLHPTADQIELYAYHLPNSSLSNLMDIFVNLCTVDDSLYFMCNIEDFKFLAEMI 549
Query: 431 DQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIVQLREIFTP-G-TLQVPKT 488
+PL L +Y+FC +P++ + A YS+ + I + G ++PKT
Sbjct: 550 QHVPLPLRARYVFCCAPINRKMPFVCSMFLKIARQYSRNEPITFEFIKSNCGWPFKLPKT 609
Query: 489 QAALRELESIHKVLDLYVWLSFRLEESFPDR-ELAASQKAI 528
L LES+ V+DLY R + FP+ + +QK +
Sbjct: 610 ILDLVHLESVFDVMDLY-----RFMDLFPEAGNVREAQKEL 645
>UNIPROTKB|A6QP28 [details] [associations]
symbol:SUPV3L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070827 "chromatin maintenance" evidence=IEA]
[GO:0070584 "mitochondrion morphogenesis" evidence=IEA] [GO:0045025
"mitochondrial degradosome" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA] [GO:0034458 "3'-5' RNA helicase
activity" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IEA] [GO:0000962
"positive regulation of mitochondrial RNA catabolic process"
evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0030307 GO:GO:0003677
GO:GO:0042645 GO:GO:0006310 GO:GO:0003725 GO:GO:0003678
GO:GO:0004004 GO:GO:0070584 GO:GO:0000958 eggNOG:COG0513
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
HOGENOM:HOG000175283 GeneTree:ENSGT00390000003100 CTD:6832
HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ GO:GO:0034458 GO:GO:0035946
GO:GO:0035945 EMBL:DAAA02061832 EMBL:BC149119 IPI:IPI00692690
RefSeq:NP_001095332.1 UniGene:Bt.27125 STRING:A6QP28
Ensembl:ENSBTAT00000001386 GeneID:505988 KEGG:bta:505988
InParanoid:A6QP28 OMA:XGVPCDL NextBio:20867398 Uniprot:A6QP28
Length = 535
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 172/352 (48%), Positives = 239/352 (67%)
Query: 60 TDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAK 119
+DL P WYP AR RK+I H GPTNSGKT+ A+ + S+ SG+YCGPL+LLA E+ +
Sbjct: 184 SDLRIPPNWYPEARAIHRKIIFHSGPTNSGKTYHAIQKYLSAKSGVYCGPLKLLAHEIFE 243
Query: 120 RLNKANVSCDLITGQEREEVD--G--AKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRG 175
+ N A V CDL+TG+ER VD G A H A TVEM V + Y+ AVIDEIQM+ RG
Sbjct: 244 KSNAAGVPCDLVTGEERVSVDPDGKQAAHVACTVEMCSVTTPYEVAVIDEIQMIKDPARG 303
Query: 176 FSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFS 235
+++TRALLG+CA E+HLCG+ AA+ ++ +++ TG+DV+V++Y+RL+P+ L+ L S
Sbjct: 304 WAWTRALLGLCAEEIHLCGESAAIDMVTELMYTTGEDVEVRTYKRLTPISVLDHALESLD 363
Query: 236 NIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVL 295
N++ GDCIV FS++ IY + + IE RG +++YGSLPP T+ QA +FND +L
Sbjct: 364 NLRPGDCIVCFSKNDIYSVSRQIEIRGLE-SAVIYGSLPPGTKLAQAKKFNDPDDPCKIL 422
Query: 296 VASDAIGMGLNLNISRIIF-STMKKF---DGV-ELRDLTVPEVKQIAGRAGRYGSKFPVG 350
VA+DAIGMGLNL+I RIIF S MK G E+ +T + QIAGRAGR+ SKF G
Sbjct: 423 VATDAIGMGLNLSIRRIIFYSLMKPSINEKGEKEIEPITTSQALQIAGRAGRFSSKFKEG 482
Query: 351 EVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGIL 402
EVT ++ EDL LL + L P +++AGL P + I M++ PD++L ++
Sbjct: 483 EVTTMNREDLSLLKEILNRPVDPIKAAGLHPTAEQIEMFAYHLPDTTLSNLI 534
>POMBASE|SPAC637.11 [details] [associations]
symbol:rpm2 "mitochondrial ATP-dependent RNA helicase
Rpm2" species:4896 "Schizosaccharomyces pombe" [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IMP] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0006401 "RNA catabolic
process" evidence=IMP] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC637.11 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005759 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 GO:GO:0000965 PIR:T39003 RefSeq:NP_594629.1
ProteinModelPortal:O94445 STRING:O94445 EnsemblFungi:SPAC637.11.1
GeneID:2543678 KEGG:spo:SPAC637.11 OrthoDB:EOG4X6GJ1
NextBio:20804684 Uniprot:O94445
Length = 647
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 189/493 (38%), Positives = 290/493 (58%)
Query: 60 TDLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAK 119
TDL P WYP ARK R +I+HVGPTNSGKTH+AL RL++ GI+ GPLRLLA E+
Sbjct: 155 TDLKNPIEWYPGARKLRRHIIMHVGPTNSGKTHRALERLKTCKKGIFAGPLRLLAHEIYN 214
Query: 120 RLNKANVSCDLITGQE-REEVDGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSF 178
RL ++C+L TG+E R + + + TVEM ++ + +D AVIDEIQM+ +RG+++
Sbjct: 215 RLQANGIACNLYTGEEIRNDYPFPQVVSCTVEMCNLSTTFDVAVIDEIQMMADPSRGYAW 274
Query: 179 TRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPL-GSFSNI 237
T+ LLG+ A E+HLCG+ + V L++ I ++T DD V YERL+PL L G S +
Sbjct: 275 TQCLLGLQAKEIHLCGEESVVKLVRSIAKMTQDDFTVYRYERLNPLHVAEKSLNGKLSEL 334
Query: 238 QTGDCIVTFSRHAIYRLKKAIESR-GKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLV 296
+ GDC+V FSR I+ LK I+ GK +++YGSLPPE R +QA+ FN SS+ ++L+
Sbjct: 335 KDGDCVVAFSRKNIFTLKSKIDQALGKK-SAVIYGSLPPEVRNQQASLFNSKSSDENILL 393
Query: 297 ASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRY---GSKFPVGEVT 353
ASDAIGMGLNL + RI+FS +KKF GV D+ VP++KQIAGRAGR+ GSK G VT
Sbjct: 394 ASDAIGMGLNLGVKRIVFSDLKKFSGVSTIDIPVPQIKQIAGRAGRHNPNGSKQSAGIVT 453
Query: 354 CLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGIL-EHFLENAKLS 412
L +D L++++ P+ L +A + DL + Y L D ++ + + + AK +
Sbjct: 454 TLYQKDFAKLNRAMNLPTKNLFNACIGAKDDLFFRYLSLFSDDIPQKLIFDRYFKLAKTT 513
Query: 413 ENYFFANCEEVLKVATVIDQLP-LRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGI 471
+ + + +D + L + +K PV + + + + ++
Sbjct: 514 TPFVVSEGALSTFIIEYLDHIKGLTIKDKIKLLGCPVLKHSKYAPLFIREIGCVIAQGKR 573
Query: 472 VQLREIFT-P-GTLQ--VPKTQAALRELESIHKVLDLYVWLSFRLEESFPDRELAASQKA 527
+Q+ ++ + P L+ +P T+ L++LE +HK++ Y+W S R + A KA
Sbjct: 574 LQIYDLKSVPLEILERGIPTTETELQQLEQLHKLIVAYMWASIRYP-AILQNGAAEKTKA 632
Query: 528 ICSMLIEEFLERL 540
I + + + +L
Sbjct: 633 IAEAFLIKGISKL 645
>CGD|CAL0002663 [details] [associations]
symbol:SUV3 species:5476 "Candida albicans" [GO:0009060
"aerobic respiration" evidence=IMP] [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0045025
"mitochondrial degradosome" evidence=IEA] [GO:0000262
"mitochondrial chromosome" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0071467 "cellular response to pH"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0006264
"mitochondrial DNA replication" evidence=IEA] [GO:0000957
"mitochondrial RNA catabolic process" evidence=IEA] [GO:0000372
"Group I intron splicing" evidence=IEA] [GO:0000965 "mitochondrial
RNA 3'-end processing" evidence=IEA] [GO:0044011 "single-species
biofilm formation on inanimate substrate" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036187 "cell growth
mode switching, budding to filamentous" evidence=IMP] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0008859
"exoribonuclease II activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002663 GO:GO:0005524 GO:GO:0071216
GO:GO:0001410 GO:GO:0036180 GO:GO:0003676 GO:GO:0035690
GO:GO:0004386 GO:GO:0009060 GO:GO:0044011 InterPro:IPR014001
SMART:SM00487 GO:GO:0071467 GO:GO:0036177 GO:GO:0036187
eggNOG:COG0513 EMBL:AACQ01000142 EMBL:AACQ01000141
RefSeq:XP_712911.1 RefSeq:XP_712944.1 ProteinModelPortal:Q59TB2
STRING:Q59TB2 GeneID:3645451 GeneID:3645490 KEGG:cal:CaO19.11994
KEGG:cal:CaO19.4519 Uniprot:Q59TB2
Length = 720
Score = 731 (262.4 bits), Expect = 8.2e-81, Sum P(3) = 8.2e-81
Identities = 160/415 (38%), Positives = 252/415 (60%)
Query: 28 SLNSEKIIGAFASV--DVIIRSYCSGSGMKKFDFTDLTRPHTWYPLARKKVRKVILHVGP 85
S N++ I+ F + + ++ + +K D + P W+P ARK RK+I+HVGP
Sbjct: 164 SSNNDLIMQLFTQLLHKIFLQYRIENASFEK-PKVDFSNPAEWFPEARKMKRKIIMHVGP 222
Query: 86 TNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQER-EEVDG-AK 143
TNSGKT+ +L +L S +G Y GPLRLLA E+ ++ N + C+LITG+E +D K
Sbjct: 223 TNSGKTYNSLIKLSKSKTGYYAGPLRLLAREIYEKFNSQGIGCNLITGEEVVPSIDKYGK 282
Query: 144 HRAV---TVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVP 200
+ T+EM + D VIDEIQM+ RG +T A+LG+ A+E+HLCG+ +AVP
Sbjct: 283 VSGIASGTIEMIPLHKKMDLCVIDEIQMIADPLRGSVWTNAVLGVLAHEIHLCGEESAVP 342
Query: 201 LIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIES 260
IQ+++++TGD+++++ + RL L + S ++ GDC+V FS+ I + K IE
Sbjct: 343 FIQKMVEITGDELEIKKFNRLGKLT-VEKSNTSLQQLKKGDCLVVFSKKKILKFKCDIER 401
Query: 261 RGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKF 320
+ ++YG+LPPE R+++A++FN+ E+DVLVASDAIGMGLNL I+RI+FS + KF
Sbjct: 402 NTRLKVGVIYGALPPEIRSQEASKFNNG--EYDVLVASDAIGMGLNLKINRIVFSGVNKF 459
Query: 321 DGVELRDLTVPEVKQIAGRAGRYGSKF--PVGEVTCLDSEDLPLLHKSLLEPSPMLESAG 378
+G + L+V +VKQIAGRAGR+ ++ G VT L L + + L P + A
Sbjct: 460 NGSTVEKLSVSQVKQIAGRAGRFSAQHGSKEGFVTALHRSSLVYIDQCLKTPVSEISKAC 519
Query: 379 LFPNFDLIYMYSRLHP-DSSLYGILEHFLENA-KL-SENYFFANCEEVLKVATVI 430
++P ++ Y P SSL + E+FL N K S+N+F + ++ +++ ++
Sbjct: 520 IWPTSNIWRQYMANDPRKSSLSSVYENFLTNVLKFQSDNFFISELDQKVQLLNLV 574
Score = 70 (29.7 bits), Expect = 8.2e-81, Sum P(3) = 8.2e-81
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 494 ELESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEEFL 537
+LE +H+++ L++WLS R F D++ A KA+ I + L
Sbjct: 656 KLEDMHRLVLLFLWLSQRFPTLFIDKDSAMEVKALVEKRINQEL 699
Score = 42 (19.8 bits), Expect = 8.2e-81, Sum P(3) = 8.2e-81
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 18 RILRDNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGMKKFDFTD 61
R+LR +V+ + + + G V++I R+Y + D D
Sbjct: 10 RLLRYSVKRYVASLYSLRGVSTRVNLIHRTYATTVAKDNIDHND 53
>UNIPROTKB|Q59TB2 [details] [associations]
symbol:SUV3 "Putative uncharacterized protein SUV3"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0009060 "aerobic respiration"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036177
"filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0036187 "cell growth mode switching, budding to
filamentous" evidence=IMP] [GO:0044011 "single-species biofilm
formation on inanimate substrate" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0071467 "cellular response to pH" evidence=IMP]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 CGD:CAL0002663 GO:GO:0005524
GO:GO:0071216 GO:GO:0001410 GO:GO:0036180 GO:GO:0003676
GO:GO:0035690 GO:GO:0004386 GO:GO:0009060 GO:GO:0044011
InterPro:IPR014001 SMART:SM00487 GO:GO:0071467 GO:GO:0036177
GO:GO:0036187 eggNOG:COG0513 EMBL:AACQ01000142 EMBL:AACQ01000141
RefSeq:XP_712911.1 RefSeq:XP_712944.1 ProteinModelPortal:Q59TB2
STRING:Q59TB2 GeneID:3645451 GeneID:3645490 KEGG:cal:CaO19.11994
KEGG:cal:CaO19.4519 Uniprot:Q59TB2
Length = 720
Score = 731 (262.4 bits), Expect = 8.2e-81, Sum P(3) = 8.2e-81
Identities = 160/415 (38%), Positives = 252/415 (60%)
Query: 28 SLNSEKIIGAFASV--DVIIRSYCSGSGMKKFDFTDLTRPHTWYPLARKKVRKVILHVGP 85
S N++ I+ F + + ++ + +K D + P W+P ARK RK+I+HVGP
Sbjct: 164 SSNNDLIMQLFTQLLHKIFLQYRIENASFEK-PKVDFSNPAEWFPEARKMKRKIIMHVGP 222
Query: 86 TNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQER-EEVDG-AK 143
TNSGKT+ +L +L S +G Y GPLRLLA E+ ++ N + C+LITG+E +D K
Sbjct: 223 TNSGKTYNSLIKLSKSKTGYYAGPLRLLAREIYEKFNSQGIGCNLITGEEVVPSIDKYGK 282
Query: 144 HRAV---TVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVP 200
+ T+EM + D VIDEIQM+ RG +T A+LG+ A+E+HLCG+ +AVP
Sbjct: 283 VSGIASGTIEMIPLHKKMDLCVIDEIQMIADPLRGSVWTNAVLGVLAHEIHLCGEESAVP 342
Query: 201 LIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIES 260
IQ+++++TGD+++++ + RL L + S ++ GDC+V FS+ I + K IE
Sbjct: 343 FIQKMVEITGDELEIKKFNRLGKLT-VEKSNTSLQQLKKGDCLVVFSKKKILKFKCDIER 401
Query: 261 RGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKF 320
+ ++YG+LPPE R+++A++FN+ E+DVLVASDAIGMGLNL I+RI+FS + KF
Sbjct: 402 NTRLKVGVIYGALPPEIRSQEASKFNNG--EYDVLVASDAIGMGLNLKINRIVFSGVNKF 459
Query: 321 DGVELRDLTVPEVKQIAGRAGRYGSKF--PVGEVTCLDSEDLPLLHKSLLEPSPMLESAG 378
+G + L+V +VKQIAGRAGR+ ++ G VT L L + + L P + A
Sbjct: 460 NGSTVEKLSVSQVKQIAGRAGRFSAQHGSKEGFVTALHRSSLVYIDQCLKTPVSEISKAC 519
Query: 379 LFPNFDLIYMYSRLHP-DSSLYGILEHFLENA-KL-SENYFFANCEEVLKVATVI 430
++P ++ Y P SSL + E+FL N K S+N+F + ++ +++ ++
Sbjct: 520 IWPTSNIWRQYMANDPRKSSLSSVYENFLTNVLKFQSDNFFISELDQKVQLLNLV 574
Score = 70 (29.7 bits), Expect = 8.2e-81, Sum P(3) = 8.2e-81
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 494 ELESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEEFL 537
+LE +H+++ L++WLS R F D++ A KA+ I + L
Sbjct: 656 KLEDMHRLVLLFLWLSQRFPTLFIDKDSAMEVKALVEKRINQEL 699
Score = 42 (19.8 bits), Expect = 8.2e-81, Sum P(3) = 8.2e-81
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 18 RILRDNVEPFSLNSEKIIGAFASVDVIIRSYCSGSGMKKFDFTD 61
R+LR +V+ + + + G V++I R+Y + D D
Sbjct: 10 RLLRYSVKRYVASLYSLRGVSTRVNLIHRTYATTVAKDNIDHND 53
>SGD|S000005950 [details] [associations]
symbol:SUV3 "ATP-dependent RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000957 "mitochondrial RNA catabolic process" evidence=IMP]
[GO:0006264 "mitochondrial DNA replication" evidence=IMP]
[GO:0000262 "mitochondrial chromosome" evidence=IDA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0045025
"mitochondrial degradosome" evidence=IDA] [GO:0008859
"exoribonuclease II activity" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000372 "Group I intron splicing"
evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 SGD:S000005950 GO:GO:0005524
GO:GO:0005759 GO:GO:0003723 EMBL:BK006949 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 GO:GO:0000372
eggNOG:COG0513 EMBL:U36624 GO:GO:0006264 GO:GO:0045025
GO:GO:0000957 GeneTree:ENSGT00390000003100 OrthoDB:EOG4X6GJ1
EMBL:M91167 PIR:S63453 RefSeq:NP_015296.1 ProteinModelPortal:P32580
SMR:P32580 DIP:DIP-6302N IntAct:P32580 MINT:MINT-698589
STRING:P32580 PaxDb:P32580 PeptideAtlas:P32580 EnsemblFungi:YPL029W
GeneID:856078 KEGG:sce:YPL029W CYGD:YPL029w HOGENOM:HOG000248220
OMA:GTIEMIP NextBio:981083 Genevestigator:P32580 GermOnline:YPL029W
Uniprot:P32580
Length = 737
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 186/500 (37%), Positives = 287/500 (57%)
Query: 61 DLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKR 120
D+T P W+P ARK R +I+H+GPTNSGKT++AL +L+S G Y GPLRLLA EV R
Sbjct: 216 DITNPAEWFPEARKIRRHIIMHIGPTNSGKTYRALQKLKSVDRGYYAGPLRLLAREVYDR 275
Query: 121 LNKANVSCDLITGQE--REEVDGAKHRAVT---VEMADVVSDYDCAVIDEIQMLGCKTRG 175
+ + C+L+TG+E R+ D +T VEM + +D V+DEIQM+ RG
Sbjct: 276 FHAEKIRCNLLTGEEVIRDLDDRGNSAGLTSGTVEMVPINQKFDVVVLDEIQMMSDGDRG 335
Query: 176 FSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPL-GSF 234
+++T ALLG+ + E+HLCG+ + +PL++ I+++TGD + + YERL L P+
Sbjct: 336 WAWTNALLGVVSKEVHLCGEKSVLPLVKSIVKMTGDKLTINEYERLGKLSVEEKPIKDGI 395
Query: 235 SNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDV 294
++ GDC+V FS+ I LK IE +++YGSLPPETR +QA FN+ E+D+
Sbjct: 396 KGLRKGDCVVAFSKKKILDLKLKIEKDTNLKVAVIYGSLPPETRVQQAALFNNG--EYDI 453
Query: 295 LVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSK-----FPV 349
+VASDAIGMGLNL+I R++F+T K++G EL ++T ++KQI GRAGR+ S+ P
Sbjct: 454 MVASDAIGMGLNLSIDRVVFTTNMKYNGEELMEMTSSQIKQIGGRAGRFKSRSASGGVPQ 513
Query: 350 GEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFL--E 407
G +T +S+ L + K++ P L++A +P ++ P + +L + E
Sbjct: 514 GFITSFESKVLKSVRKAIEAPVEYLKTAVTWPTDEICAQLMTQFPPGTPTSVLLQTISDE 573
Query: 408 NAKLSENYF-FANCEEVLKVATVIDQLP-LRLHEKYLFCISPV-DMNDDISSQGLTQFAT 464
K S+N F ++ + LKV + + + + +K +PV DM + ++ T+F
Sbjct: 574 LEKSSDNLFTLSDLKSKLKVIGLFEHMEDIPFFDKLKLSNAPVKDM--PMVTKAFTKFCE 631
Query: 465 NYSKK---GIVQLREIFTPGTLQ-VPKTQAALRELESIHKVLDLYVWLSFRLEESFPDRE 520
+K+ G++ R F +P +L ES++ ++ LY WLS R F D E
Sbjct: 632 TIAKRHTRGLLSYRLPFNLLDYNCIPNESYSLEVYESLYNIITLYFWLSNRYPNYFIDME 691
Query: 521 LAASQKAICSMLIEEFLERL 540
A K C M+I E L+RL
Sbjct: 692 SAKDLKYFCEMIIFEKLDRL 711
>ASPGD|ASPL0000071675 [details] [associations]
symbol:AN4723 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0045025 "mitochondrial degradosome"
evidence=IEA] [GO:0000262 "mitochondrial chromosome" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0008859 "exoribonuclease II activity" evidence=IEA] [GO:0006264
"mitochondrial DNA replication" evidence=IEA] [GO:0000957
"mitochondrial RNA catabolic process" evidence=IEA] [GO:0000372
"Group I intron splicing" evidence=IEA] [GO:0000965 "mitochondrial
RNA 3'-end processing" evidence=IEA] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
EMBL:BN001303 HOGENOM:HOG000175283 EnsemblFungi:CADANIAT00005706
OMA:CALITGE Uniprot:C8VAV2
Length = 832
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 182/413 (44%), Positives = 252/413 (61%)
Query: 61 DLTRPHTWYPLARKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKR 120
DL P WYP AR R + LHVGPTNSGKT+ AL RLESS SG Y GPLRLLA EV R
Sbjct: 169 DLRYPAEWYPQARAIQRTIHLHVGPTNSGKTYHALKRLESSKSGFYAGPLRLLAQEVYHR 228
Query: 121 LNKANVSCDLITGQEREEVDGAKHRAV--TVEMADVVSDYDCAVIDEIQMLGCKTRGFSF 178
+ + L+TG E +G K V TVEM ++ Y+ VIDEIQM+ RG+++
Sbjct: 229 FKSSGIPVSLVTGDEVRLSEGEKAVVVSNTVEMVNLGQTYEVGVIDEIQMIADPRRGWAW 288
Query: 179 TRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPL-GSFSNI 237
TRALLG A ELHLCG+ VPLI+Q+ + GD + + YERL+PL +N L G +++
Sbjct: 289 TRALLGAKATELHLCGETRVVPLIRQLAALAGDKLVIHRYERLNPLKAMNKSLKGDLTSL 348
Query: 238 QTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVA 297
Q GDCIV+FSR I+ LK IE + +I+YG LP E RT+QA+ FND ++++D LVA
Sbjct: 349 QKGDCIVSFSRVGIHALKADIERKTGRRAAIIYGGLPAEIRTQQASLFNDPNNDYDFLVA 408
Query: 298 SDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFP--------- 348
SDAIGMGLNL+ RIIF T+ K L+ LTVPE+KQI GRAGRY S
Sbjct: 409 SDAIGMGLNLSCRRIIFETVVKTLPSGLKRLTVPEIKQIGGRAGRYRSAAQHGKDHQQDN 468
Query: 349 ----VGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIY-MYSRLHP-DSSLYGIL 402
VG VT L+ DLP + ++L P + +AG+ P D +Y ++ P ++SL ++
Sbjct: 469 DNDNVGYVTSLEEVDLPYIQEALNTEPPPISAAGINPP-DSVYEKFAAYFPSNASLAYMV 527
Query: 403 EHFLENAKLSENYFFANCEEVLKVATVIDQLP-LRLHEKYLFCISPVDMNDDI 454
+ E A+++ +F + L+ A +ID +P L ++ F +P++ +++
Sbjct: 528 KRLTEIARINNLFFMCDPSPNLENAEIIDAVPGLHFVDQLTFMAAPMNPREEL 580
Score = 168 (64.2 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 52/199 (26%), Positives = 101/199 (50%)
Query: 349 VGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIY-MYSRLHP-DSSLYGILEHFL 406
VG VT L+ DLP + ++L P + +AG+ P D +Y ++ P ++SL +++
Sbjct: 473 VGYVTSLEEVDLPYIQEALNTEPPPISAAGINPP-DSVYEKFAAYFPSNASLAYMVKRLT 531
Query: 407 ENAKLSENYFFANCEEVLKVATVIDQLP-LRLHEKYLFCISPVDMNDDISSQGLTQF--- 462
E A+++ +F + L+ A +ID +P L ++ F +P++ +++ + F
Sbjct: 532 EIARINNLFFMCDPSPNLENAEIIDAVPGLHFVDQLTFMAAPMNPREELGRRVAMAFERC 591
Query: 463 ATNYSKKGIVQLREIFTPGTLQVPKT--QAALRELESIHKVLDLYVWLSFRLEESFPDRE 520
++ ++ + E+ L+ P + + + +LE +H+ + LY WLS+R F DR
Sbjct: 592 VLEHTNGRLLDIEEVNLE-ILEEPVSGNKEYMHKLEGLHRSVILYTWLSYRFGGIFTDRT 650
Query: 521 LAASQKAICSMLIEEFLER 539
LA K L+EE + R
Sbjct: 651 LAVHVKE----LVEERMVR 665
>GENEDB_PFALCIPARUM|PFF1140c [details] [associations]
symbol:PFF1140c "ATP-dependent DEAD box
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0016070 GO:GO:0004004 EMBL:AL844505 RefSeq:XP_966219.1
ProteinModelPortal:C6KT73 PRIDE:C6KT73
EnsemblProtists:PFF1140c:mRNA GeneID:3885873 KEGG:pfa:PFF1140c
EuPathDB:PlasmoDB:PF3D7_0623700 HOGENOM:HOG000281593 Uniprot:C6KT73
Length = 1137
Score = 291 (107.5 bits), Expect = 1.5e-58, Sum P(5) = 1.5e-58
Identities = 53/148 (35%), Positives = 92/148 (62%)
Query: 140 DGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAV 199
D H T+EM + +YDCA++DEIQM+ ++RG ++T L+ + + +++LCG +
Sbjct: 407 DNVTHTVCTIEMTPLNKEYDCAIVDEIQMINNESRGHAWTNVLMNLNSKDIYLCGSEYII 466
Query: 200 PLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIE 259
LI+ + + D + ++ +ERL L L + ++QTGDCI+TFSR+ I LK+ +E
Sbjct: 467 DLIKNLADILNDKLIIKKFERLGSL-HLQEYNTTLEDVQTGDCIITFSRNNIMLLKRILE 525
Query: 260 SRGKHLCSIVYGSLPPETRTRQATRFND 287
K + ++YGSLPP+++ +Q FN+
Sbjct: 526 KYNKRVF-VIYGSLPPDSKKKQINMFNE 552
Score = 190 (71.9 bits), Expect = 1.5e-58, Sum P(5) = 1.5e-58
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 73 RKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLIT 132
+KKVR + L+VGP NSGKT+ A +L S +G+YC PLRLLAWEV +L + N +L+T
Sbjct: 253 KKKVRNIHLYVGPPNSGKTYHAFQKLMLSKNGLYCSPLRLLAWEVYSKLTRMNKKVNLLT 312
Query: 133 GQE 135
GQE
Sbjct: 313 GQE 315
Score = 182 (69.1 bits), Expect = 1.5e-58, Sum P(5) = 1.5e-58
Identities = 37/73 (50%), Positives = 53/73 (72%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYG---SKFPVG 350
+L+A+D IGMGLN+NI RIIF ++KK+DG LR LT+ E QIAGRAGR+ + +G
Sbjct: 642 ILIATDVIGMGLNINIKRIIFYSLKKYDGDILRYLTMSEFLQIAGRAGRFNPSCTNKSIG 701
Query: 351 EVTCLDSEDLPLL 363
+TC+ +D+ +L
Sbjct: 702 YITCVHLDDINIL 714
Score = 88 (36.0 bits), Expect = 1.5e-58, Sum P(5) = 1.5e-58
Identities = 23/103 (22%), Positives = 50/103 (48%)
Query: 377 AGLFPNFDLIYMYSRL-----HPDSSLYGILEHFLENAKLSENYFFA--NCEEVLKVATV 429
AG FPN+ ++ + + L+ IL+ +E KL++ YFF N ++ +
Sbjct: 838 AGFFPNYHIVEELRKTLEYEYNSKIKLHDILKVLVEYVKLNDEYFFLTKNYNNMITITKE 897
Query: 430 IDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIV 472
++ + L + + + + P+++N+ + L F ++S G V
Sbjct: 898 LEHINLEQNIIFTYSLCPININNIVLLNTLKTFCMSHSILGYV 940
Score = 60 (26.2 bits), Expect = 1.5e-58, Sum P(5) = 1.5e-58
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 495 LESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEEFL 537
LE ++++D+Y WL + + + + L +++K SM I L
Sbjct: 1084 LEIYYEIMDMYCWLYTKFPDVYKNINLVSNEKKKVSMKIIHML 1126
>UNIPROTKB|C6KT73 [details] [associations]
symbol:PFF1140c "ATP dependent DEAD-box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0016070
GO:GO:0004004 EMBL:AL844505 RefSeq:XP_966219.1
ProteinModelPortal:C6KT73 PRIDE:C6KT73
EnsemblProtists:PFF1140c:mRNA GeneID:3885873 KEGG:pfa:PFF1140c
EuPathDB:PlasmoDB:PF3D7_0623700 HOGENOM:HOG000281593 Uniprot:C6KT73
Length = 1137
Score = 291 (107.5 bits), Expect = 1.5e-58, Sum P(5) = 1.5e-58
Identities = 53/148 (35%), Positives = 92/148 (62%)
Query: 140 DGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAV 199
D H T+EM + +YDCA++DEIQM+ ++RG ++T L+ + + +++LCG +
Sbjct: 407 DNVTHTVCTIEMTPLNKEYDCAIVDEIQMINNESRGHAWTNVLMNLNSKDIYLCGSEYII 466
Query: 200 PLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIE 259
LI+ + + D + ++ +ERL L L + ++QTGDCI+TFSR+ I LK+ +E
Sbjct: 467 DLIKNLADILNDKLIIKKFERLGSL-HLQEYNTTLEDVQTGDCIITFSRNNIMLLKRILE 525
Query: 260 SRGKHLCSIVYGSLPPETRTRQATRFND 287
K + ++YGSLPP+++ +Q FN+
Sbjct: 526 KYNKRVF-VIYGSLPPDSKKKQINMFNE 552
Score = 190 (71.9 bits), Expect = 1.5e-58, Sum P(5) = 1.5e-58
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 73 RKKVRKVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLIT 132
+KKVR + L+VGP NSGKT+ A +L S +G+YC PLRLLAWEV +L + N +L+T
Sbjct: 253 KKKVRNIHLYVGPPNSGKTYHAFQKLMLSKNGLYCSPLRLLAWEVYSKLTRMNKKVNLLT 312
Query: 133 GQE 135
GQE
Sbjct: 313 GQE 315
Score = 182 (69.1 bits), Expect = 1.5e-58, Sum P(5) = 1.5e-58
Identities = 37/73 (50%), Positives = 53/73 (72%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYG---SKFPVG 350
+L+A+D IGMGLN+NI RIIF ++KK+DG LR LT+ E QIAGRAGR+ + +G
Sbjct: 642 ILIATDVIGMGLNINIKRIIFYSLKKYDGDILRYLTMSEFLQIAGRAGRFNPSCTNKSIG 701
Query: 351 EVTCLDSEDLPLL 363
+TC+ +D+ +L
Sbjct: 702 YITCVHLDDINIL 714
Score = 88 (36.0 bits), Expect = 1.5e-58, Sum P(5) = 1.5e-58
Identities = 23/103 (22%), Positives = 50/103 (48%)
Query: 377 AGLFPNFDLIYMYSRL-----HPDSSLYGILEHFLENAKLSENYFFA--NCEEVLKVATV 429
AG FPN+ ++ + + L+ IL+ +E KL++ YFF N ++ +
Sbjct: 838 AGFFPNYHIVEELRKTLEYEYNSKIKLHDILKVLVEYVKLNDEYFFLTKNYNNMITITKE 897
Query: 430 IDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIV 472
++ + L + + + + P+++N+ + L F ++S G V
Sbjct: 898 LEHINLEQNIIFTYSLCPININNIVLLNTLKTFCMSHSILGYV 940
Score = 60 (26.2 bits), Expect = 1.5e-58, Sum P(5) = 1.5e-58
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 495 LESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEEFL 537
LE ++++D+Y WL + + + + L +++K SM I L
Sbjct: 1084 LEIYYEIMDMYCWLYTKFPDVYKNINLVSNEKKKVSMKIIHML 1126
>UNIPROTKB|B1AR60 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 EMBL:AL596223 UniGene:Hs.106469
HGNC:HGNC:11471 IPI:IPI00478485 SMR:B1AR60 Ensembl:ENST00000422378
Uniprot:B1AR60
Length = 263
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 84/173 (48%), Positives = 124/173 (71%)
Query: 147 VTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQIL 206
V E+ + + AVIDEIQM+ RG+++TRALLG+CA E+HLCG+PAA+ L+ +++
Sbjct: 80 VGAELTRPLDKNEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGEPAAIDLVMELM 139
Query: 207 QVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLC 266
TG++V+V+ Y+RL+P+ L+ L S N++ GDCIV FS++ IY + + IE RG
Sbjct: 140 YTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLE-S 198
Query: 267 SIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKK 319
+++YGSLPP T+ QA +FND + +LVA+DAIGMGLNL+I RIIF ++ K
Sbjct: 199 AVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIK 251
>TIGR_CMR|SPO_1417 [details] [associations]
symbol:SPO_1417 "helicase, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 GO:GO:0004386
RefSeq:YP_166658.1 ProteinModelPortal:Q5LTJ7 GeneID:3192722
KEGG:sil:SPO1417 PATRIC:23376149 HOGENOM:HOG000141658 OMA:IAQIRTW
ProtClustDB:CLSK2767239 Uniprot:Q5LTJ7
Length = 959
Score = 338 (124.0 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 106/289 (36%), Positives = 144/289 (49%)
Query: 78 KVILHVGPTNSGKTHQALSRLESSSSGIYCGPLRLLAWEVAKR---LNKANVSCDLITGQ 134
+++ +GPTN+GKTH A+ R+ +G+ PLRLLA EV + L +V L+TG+
Sbjct: 6 RIVAVLGPTNTGKTHYAIERMLGHRTGVIGLPLRLLAREVYDKIVALRGPSVVA-LVTGE 64
Query: 135 EREEVDGAKHRAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELH--- 191
ER ++ TVE DC +DEIQ+ RG FT LL A LH
Sbjct: 65 ERIVPPRTQYWVCTVEAMPEGLGADCVAVDEIQLCADPERGHVFTDRLLR--ARGLHETL 122
Query: 192 LCG-DPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHA 250
L G D P+ + + + ER+S LV + + IV FS
Sbjct: 123 LLGSDTMRGPIAALV-----PEAQFVRRERMSQLVYTGSK--KITRMPPRSAIVGFSVEN 175
Query: 251 IYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNIS 310
+Y + + I R K ++V G+L P TR Q + + E D LVA+DAIGMGLNL+I
Sbjct: 176 VYAIAELIR-RQKGGAAVVMGALSPRTRNAQVDLYQNG--EVDYLVATDAIGMGLNLDID 232
Query: 311 RIIFSTMKKFDGVELRDLTVPEVKQIAGRAGR--YGSKFPV-GEVTCLD 356
+ FS + KFDG +R L E+ QIAGRAGR F V GE LD
Sbjct: 233 HVAFSALSKFDGRRMRPLAPNELAQIAGRAGRGMASGTFGVTGEARPLD 281
Score = 41 (19.5 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 20/89 (22%), Positives = 43/89 (48%)
Query: 469 KGIVQLREIFTPGTLQVPKTQAALRELESI--HKV-------LDLYVWLS--FRLEESFP 517
KG+ + E PG + VP + A ++++ +++ +D+ L+ R ++S
Sbjct: 695 KGLSEFPEAPPPGLVTVPSVKDAEPGVDTMCGYRISGERAIRIDMLERLADMLRAKDSRS 754
Query: 518 DRELAASQKAICSMLIEEF---LERLGWQ 543
E A +I M +E+F ++ LG++
Sbjct: 755 GFEATADMLSITGMTLEQFADLMQGLGYK 783
>FB|FBgn0039117 [details] [associations]
symbol:tst "twister" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
Length = 1197
Score = 120 (47.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYG 344
+L A++ MG+N+ ++F + KKFDG+E+R+L E Q+AGRAGR G
Sbjct: 608 LLFATETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRG 658
Score = 74 (31.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 49/202 (24%), Positives = 88/202 (43%)
Query: 77 RKVILHVGPTNSGKTHQA-----LSRLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLI 131
R+ + T++GKT A LS+ + + + IY P++ L+ + + K LI
Sbjct: 277 RQYVFVAAHTSAGKTVVAEYAIALSKRDLTRT-IYTSPIKALSNQKYRDFRKTFKDVGLI 335
Query: 132 TGQEREEVDGAKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 183
TG + E A +T E+ +DV D + + DE+ + RG + ++
Sbjct: 336 TGDLQIEPT-ASCLIMTTEILRSMLYCGSDVTRDLEWVIFDEVHYINNPERGHVWEEVII 394
Query: 184 GICANELHLCGDPAAVPLIQQILQVTGDDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCI 243
+ +++ A VP ++ G K + Y +S L VPL F + TG
Sbjct: 395 -LLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYV-ISTL-KRPVPLTHF--LYTG--A 447
Query: 244 VTFSRHAIYRLKKAIESRGKHL 265
SR I+ L ++++GK+L
Sbjct: 448 GGKSRDDIFLL---VDAQGKYL 466
>SGD|S000004390 [details] [associations]
symbol:SKI2 "Ski complex component and putative RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
GermOnline:YLR398C Uniprot:P35207
Length = 1287
Score = 125 (49.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYG 344
VL A++ MGLNL +IFS+++K DG LR+LT E Q+AGRAGR G
Sbjct: 718 VLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGRAGRRG 768
Score = 58 (25.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 25/112 (22%), Positives = 52/112 (46%)
Query: 86 TNSGKT---HQALSRLESS-SSGIYCGPLRLLAWEVAKRLNKA--NVSCDLITGQEREEV 139
T++GKT A++ + + IY P++ L+ + + + +V+ LITG +
Sbjct: 353 TSAGKTVVAEYAIAMAHRNMTKTIYTSPIKALSNQKFRDFKETFDDVNIGLITGDVQINP 412
Query: 140 DGAKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 183
D A +T E+ AD++ D + + DE+ + + RG + ++
Sbjct: 413 D-ANCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDQDRGVVWEEVII 463
>CGD|CAL0002171 [details] [associations]
symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
KEGG:cal:CaO19.6425 Uniprot:Q5A337
Length = 1245
Score = 126 (49.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 253 RLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRI 312
++ K E G+ + ++ +G L P + F A S VL A++ MGLNL +
Sbjct: 633 QILKIREMLGRGI-AVHHGGLLPIVKECIEILF--AKSLVKVLFATETFAMGLNLPTRTV 689
Query: 313 IFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSED--LPLLHKSLLEP 370
IFS+M+K DG R+L E Q++GRAGR G G V + +D P K ++
Sbjct: 690 IFSSMRKHDGRSFRNLLPGEFTQMSGRAGRRGLD-KTGTVIVMAYDDPLSPTDFKEVVLG 748
Query: 371 SPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEH-FLENA 409
+P S+ + +I R+ + +++H F EN+
Sbjct: 749 TPTKLSSQFRLTYSMILNLLRIEA-LKVEEMIKHSFSENS 787
Score = 55 (24.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 42/206 (20%), Positives = 85/206 (41%)
Query: 86 TNSGKT---HQALSRLESSSSG-IYCGPLRLLAWEVAKRLNKA--NVSCDLITGQEREEV 139
T++GKT A++ + + IY P++ L+ + + + ++ LITG +
Sbjct: 313 TSAGKTVVAEYAIAMAHRNMTKCIYTSPIKALSNQKFRDFKETFKDIDVGLITGDVQINP 372
Query: 140 DGAKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELH 191
+ A +T E+ AD++ D + + DE+ + RG + ++ + + +
Sbjct: 373 E-ANCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDIDRGVVWEEVIIMLPDHVKY 431
Query: 192 LCGDPAAVPLIQQILQVTGDDVKVQSYERLSPL--VPLNVPLGSFSNI-QTGDCIVTFSR 248
+ A VP + G + Y +P VPL + + + + + + D F
Sbjct: 432 ILLS-ATVPNTFEFANWVGRTKQKDIYVISTPKRPVPLEIFVSAKNQLFKVVDANRRFQE 490
Query: 249 HAIYRLKKAIESRGK--HLCSIVYGS 272
+ + K +E GK L S GS
Sbjct: 491 NEFRKHKDLLEGGGKKNELPSTTMGS 516
>ASPGD|ASPL0000004985 [details] [associations]
symbol:AN6007 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
Uniprot:Q5B0C3
Length = 1293
Score = 128 (50.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 53/165 (32%), Positives = 79/165 (47%)
Query: 251 IYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNIS 310
I RL++ + SRG ++ +G L P + F A + VL A++ MGLNL
Sbjct: 682 ILRLRELL-SRG---IAVHHGGLLPIMKEIVEILF--AKTLVKVLFATETFAMGLNLPTR 735
Query: 311 RIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDS--EDLP---LLHK 365
++FS +K DG RDL E Q+AGRAGR G VG V ++S ++ P L K
Sbjct: 736 TVVFSGFRKHDGKGFRDLLPGEYTQMAGRAGRRGLD-NVGYVIVVNSGKDEAPPAGALRK 794
Query: 366 SLL-EPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENA 409
+L +P+ + L +++I R+ I F ENA
Sbjct: 795 MILGDPTKLRSQFRL--TYNMILNLLRVEALKIEEMIKRSFSENA 837
Score = 52 (23.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 29/145 (20%), Positives = 58/145 (40%)
Query: 86 TNSGKT---HQALS-RLESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + ++TG + +
Sbjct: 346 TSAGKTVVAEYAIALAAKHMTKAIYTSPIKALSNQKFRDFKNTFDDVGILTGDVQINPE- 404
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLC 193
A +T E+ AD++ D + + DE+ + RG + ++ + + L
Sbjct: 405 ASCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDLERGVVWEEVII-MLPEHVTLI 463
Query: 194 GDPAAVPLIQQILQVTGDDVKVQSY 218
A VP Q+ G K Y
Sbjct: 464 LLSATVPNTQEFASWVGRTKKKDIY 488
>UNIPROTKB|F5H7B0 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
Ensembl:ENST00000546549 Uniprot:F5H7B0
Length = 1053
Score = 127 (49.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 465 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 523
Query: 354 CLDSEDLPL---LHKSLLEPSPMLES 376
L +P LH+ ++ L+S
Sbjct: 524 LLCKGRVPEMADLHRMMMGKPSQLQS 549
Score = 50 (22.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 40/199 (20%), Positives = 81/199 (40%)
Query: 86 TNSGKT---HQALSRLESSSSG-IYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + L+TG + +
Sbjct: 141 TSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE- 199
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLC 193
A +T E+ +DV+ D + + DE+ + RG + L+ + + + +
Sbjct: 200 ASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-MLPDHVSII 258
Query: 194 GDPAAVPLIQQILQVTGDDVKVQSY--ERLSPLVPLNVPL--GSFSNIQTGDCIVTFSRH 249
A VP + G + Q Y ++ VPL L G+ S Q G+ +
Sbjct: 259 LLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQ-GELFLLLDSR 317
Query: 250 AIYRLK---KAIESRGKHL 265
+ K A+E++ + +
Sbjct: 318 GAFHTKGYYAAVEAKKERM 336
>UNIPROTKB|F8VS23 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
Uniprot:F8VS23
Length = 1053
Score = 127 (49.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 465 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 523
Query: 354 CLDSEDLPL---LHKSLLEPSPMLES 376
L +P LH+ ++ L+S
Sbjct: 524 LLCKGRVPEMADLHRMMMGKPSQLQS 549
Score = 50 (22.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 40/199 (20%), Positives = 81/199 (40%)
Query: 86 TNSGKT---HQALSRLESSSSG-IYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + L+TG + +
Sbjct: 141 TSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE- 199
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLC 193
A +T E+ +DV+ D + + DE+ + RG + L+ + + + +
Sbjct: 200 ASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-MLPDHVSII 258
Query: 194 GDPAAVPLIQQILQVTGDDVKVQSY--ERLSPLVPLNVPL--GSFSNIQTGDCIVTFSRH 249
A VP + G + Q Y ++ VPL L G+ S Q G+ +
Sbjct: 259 LLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQ-GELFLLLDSR 317
Query: 250 AIYRLK---KAIESRGKHL 265
+ K A+E++ + +
Sbjct: 318 GAFHTKGYYAAVEAKKERM 336
>UNIPROTKB|B4DM01 [details] [associations]
symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
Uniprot:B4DM01
Length = 1088
Score = 127 (49.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 500 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 558
Query: 354 CLDSEDLPL---LHKSLLEPSPMLES 376
L +P LH+ ++ L+S
Sbjct: 559 LLCKGRVPEMADLHRMMMGKPSQLQS 584
Score = 50 (22.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 40/199 (20%), Positives = 81/199 (40%)
Query: 86 TNSGKT---HQALSRLESSSSG-IYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + L+TG + +
Sbjct: 176 TSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE- 234
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLC 193
A +T E+ +DV+ D + + DE+ + RG + L+ + + + +
Sbjct: 235 ASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-MLPDHVSII 293
Query: 194 GDPAAVPLIQQILQVTGDDVKVQSY--ERLSPLVPLNVPL--GSFSNIQTGDCIVTFSRH 249
A VP + G + Q Y ++ VPL L G+ S Q G+ +
Sbjct: 294 LLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQ-GELFLLLDSR 352
Query: 250 AIYRLK---KAIESRGKHL 265
+ K A+E++ + +
Sbjct: 353 GAFHTKGYYAAVEAKKERM 371
>UNIPROTKB|F8VNU1 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
Uniprot:F8VNU1
Length = 1088
Score = 127 (49.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 500 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 558
Query: 354 CLDSEDLPL---LHKSLLEPSPMLES 376
L +P LH+ ++ L+S
Sbjct: 559 LLCKGRVPEMADLHRMMMGKPSQLQS 584
Score = 50 (22.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 40/199 (20%), Positives = 81/199 (40%)
Query: 86 TNSGKT---HQALSRLESSSSG-IYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + L+TG + +
Sbjct: 176 TSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE- 234
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLC 193
A +T E+ +DV+ D + + DE+ + RG + L+ + + + +
Sbjct: 235 ASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-MLPDHVSII 293
Query: 194 GDPAAVPLIQQILQVTGDDVKVQSY--ERLSPLVPLNVPL--GSFSNIQTGDCIVTFSRH 249
A VP + G + Q Y ++ VPL L G+ S Q G+ +
Sbjct: 294 LLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQ-GELFLLLDSR 352
Query: 250 AIYRLK---KAIESRGKHL 265
+ K A+E++ + +
Sbjct: 353 GAFHTKGYYAAVEAKKERM 371
>UNIPROTKB|F5H6Y7 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AL844853 EMBL:AL662849 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00946735
SMR:F5H6Y7 Ensembl:ENST00000547025 Ensembl:ENST00000547224
Ensembl:ENST00000547296 Ensembl:ENST00000548561
Ensembl:ENST00000552010 Uniprot:F5H6Y7
Length = 880
Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 292 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 350
Query: 354 CLDSEDLPL---LHKSLLEPSPMLES 376
L +P LH+ ++ L+S
Sbjct: 351 LLCKGRVPEMADLHRMMMGKPSQLQS 376
>UNIPROTKB|F1LP39 [details] [associations]
symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
Length = 1206
Score = 127 (49.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 617 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 675
Query: 354 CLDSEDLPL---LHKSLLEPSPMLES 376
L +P LH+ ++ L+S
Sbjct: 676 LLCKGRVPEMADLHRMMMGKPSQLQS 701
Score = 50 (22.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 86 TNSGKT---HQALSRLESSSSG-IYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + L+TG + +
Sbjct: 293 TSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE- 351
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 183
A +T E+ +DV+ D + + DE+ + RG + L+
Sbjct: 352 ASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLI 401
>RGD|1303059 [details] [associations]
symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
Genevestigator:Q6MG76 Uniprot:Q6MG76
Length = 1241
Score = 127 (49.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 652 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 710
Query: 354 CLDSEDLPL---LHKSLLEPSPMLES 376
L +P LH+ ++ L+S
Sbjct: 711 LLCKGRVPEMADLHRMMMGKPSQLQS 736
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 86 TNSGKT---HQALSRLESSSSG-IYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + L+TG + +
Sbjct: 328 TSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE- 386
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 183
A +T E+ +DV+ D + + DE+ + RG + L+
Sbjct: 387 ASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLI 436
>UNIPROTKB|E1BMS0 [details] [associations]
symbol:LOC100139548 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
KEGG:bta:100139548 Uniprot:E1BMS0
Length = 1246
Score = 127 (49.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 716
Query: 354 CLDSEDLPL---LHKSLLEPSPMLES 376
L +P LH+ ++ L+S
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQS 742
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 86 TNSGKT---HQALSRLESSSSG-IYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + L+TG + +
Sbjct: 334 TSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE- 392
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 183
A +T E+ +DV+ D + + DE+ + RG + L+
Sbjct: 393 ASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLI 442
>UNIPROTKB|E2RSD6 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
Length = 1246
Score = 127 (49.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 716
Query: 354 CLDSEDLPL---LHKSLLEPSPMLES 376
L +P LH+ ++ L+S
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQS 742
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 86 TNSGKT---HQALSRLESSSSG-IYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + L+TG + +
Sbjct: 334 TSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE- 392
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 183
A +T E+ +DV+ D + + DE+ + RG + L+
Sbjct: 393 ASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLI 442
>UNIPROTKB|Q15477 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
Ensembl:ENST00000383336 Ensembl:ENST00000412823
Ensembl:ENST00000421789 Ensembl:ENST00000429465
Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
Genevestigator:Q15477 Uniprot:Q15477
Length = 1246
Score = 127 (49.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 716
Query: 354 CLDSEDLPL---LHKSLLEPSPMLES 376
L +P LH+ ++ L+S
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQS 742
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 40/199 (20%), Positives = 81/199 (40%)
Query: 86 TNSGKT---HQALSRLESSSSG-IYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + L+TG + +
Sbjct: 334 TSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE- 392
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLC 193
A +T E+ +DV+ D + + DE+ + RG + L+ + + + +
Sbjct: 393 ASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-MLPDHVSII 451
Query: 194 GDPAAVPLIQQILQVTGDDVKVQSY--ERLSPLVPLNVPL--GSFSNIQTGDCIVTFSRH 249
A VP + G + Q Y ++ VPL L G+ S Q G+ +
Sbjct: 452 LLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQ-GELFLLLDSR 510
Query: 250 AIYRLK---KAIESRGKHL 265
+ K A+E++ + +
Sbjct: 511 GAFHTKGYYAAVEAKKERM 529
>UNIPROTKB|F1RQW4 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
Uniprot:F1RQW4
Length = 1246
Score = 127 (49.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 716
Query: 354 CLDSEDLPL---LHKSLLEPSPMLES 376
L +P LH+ ++ L+S
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQS 742
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 86 TNSGKT---HQALSRLESSSSG-IYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + L+TG + +
Sbjct: 334 TSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE- 392
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 183
A +T E+ +DV+ D + + DE+ + RG + L+
Sbjct: 393 ASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLI 442
>DICTYBASE|DDB_G0277211 [details] [associations]
symbol:DDB_G0277211 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
Length = 1378
Score = 128 (50.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 41/137 (29%), Positives = 68/137 (49%)
Query: 251 IYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNIS 310
I ++K+ +E RG + +G L P + F+ S VL A++ MG+N+
Sbjct: 745 ILQMKELLE-RG---IGVHHGGLLPIVKELVEILFS--KSLVKVLFATETFAMGVNMPAK 798
Query: 311 RIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEP 370
+++S+ +K DG+ RDL E Q++GRAGR G VG V +D+P ++ +E
Sbjct: 799 TVVYSSTRKHDGITFRDLIPGEYTQMSGRAGRRGLD-KVGTVIITYWKDIP--EQATIES 855
Query: 371 SPMLESAGLFPNFDLIY 387
+ + L F L Y
Sbjct: 856 MILGTPSRLNSQFRLTY 872
Score = 49 (22.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 22/109 (20%), Positives = 46/109 (42%)
Query: 86 TNSGKT---HQALSRL-ESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ ++ + IY P++ L+ + + LITG
Sbjct: 457 TSAGKTVIAEYAIAMAAKNMTRAIYTSPIKALSNQKFRDFKNTFNDVGLITGDVSISPSS 516
Query: 142 AKH-------RAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 183
+ R++ + AD++ D + + DE+ L RG + ++
Sbjct: 517 SCLVLTTEILRSMLYKGADLIRDIEWVIFDEVHYLNDLERGVVWEEVII 565
>CGD|CAL0003794 [details] [associations]
symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
"U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IEA]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
KEGG:cal:CaO19_1335 Uniprot:Q59PN6
Length = 1106
Score = 116 (45.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 43/167 (25%), Positives = 84/167 (50%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ +GLN+ ++F++++K+DGV R ++ E Q++GRAGR G +
Sbjct: 534 VLFATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRRGLDDRGIVIM 593
Query: 354 CLDSEDLPLLHKSLLE-PSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEH-FLENAKL 411
+D + P + K +++ + L+SA +++I R+ S + +LEH F + K
Sbjct: 594 MIDEKMEPQVAKGMVKGQADRLDSA-FHLGYNMILNLMRVEGISPEF-MLEHSFFQFQKA 651
Query: 412 SENYFF----ANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDI 454
S A C++ T+ D+ P+ + + Y + N+D+
Sbjct: 652 SSVPILEGKLAQCKQEFADITIEDE-PI-IKDYYDLKQQLLKYNEDV 696
Score = 56 (24.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 28/127 (22%), Positives = 56/127 (44%)
Query: 86 TNSGKT---HQALSR-LESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A+++ L IY P++ L+ + + L L+TG D
Sbjct: 208 TSAGKTVVAEYAIAQSLRDKQRVIYTSPIKALSNQKFRELQAIFGDVGLMTGDVTINPD- 266
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLC 193
A +T E+ ++V+ + V DE+ + K+RG + ++ + +++H
Sbjct: 267 AGCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDKSRGVVWEETII-LLPDKVHYV 325
Query: 194 GDPAAVP 200
A +P
Sbjct: 326 FLSATIP 332
>POMBASE|SPCC550.03c [details] [associations]
symbol:SPCC550.03c "Ski complex RNA helicase Ski2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0055087 "Ski complex" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
[GO:2000765 "regulation of cytoplasmic translation" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC550.03c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:2000765
EMBL:CU329672 GO:GO:0071276 GO:GO:0071585 GO:GO:0003723
GO:GO:0006402 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003724 eggNOG:COG4581 GO:GO:0055087 PIR:T41378
RefSeq:NP_588095.1 ProteinModelPortal:O59801 STRING:O59801
EnsemblFungi:SPCC550.03c.1 GeneID:2538841 KEGG:spo:SPCC550.03c
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
NextBio:20800023 Uniprot:O59801
Length = 1213
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 34/94 (36%), Positives = 45/94 (47%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 353
VL A++ MG+N+ ++FS +K DG RDL E Q +GRAGR G G V
Sbjct: 642 VLFATETFAMGVNMPAKSVVFSGTQKHDGRNFRDLLPGEYTQCSGRAGRRGLDV-TGTVI 700
Query: 354 CLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIY 387
L +LP + L M S+ L F L Y
Sbjct: 701 ILSRSELP--DTASLRHMIMGPSSKLISQFRLTY 732
Score = 53 (23.7 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 31/155 (20%), Positives = 62/155 (40%)
Query: 86 TNSGKT---HQALSRLESS-SSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A++ + + IY P++ L+ + + ++TG + +G
Sbjct: 304 TSAGKTVVAEYAIALAQKHMTKAIYTSPIKALSNQKFRDFKHKFEDVGILTGDVQVNPEG 363
Query: 142 AKH-------RAVTVEMADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCG 194
+ R++ AD++ D + + DE+ + RG + ++ + + L
Sbjct: 364 SCLLMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDLERGVVWEEVII-MLPPHVTLIL 422
Query: 195 DPAAVPLIQQILQVTGDDVKVQSY--ERLSPLVPL 227
A VP ++ G K Y L VPL
Sbjct: 423 LSATVPNTKEFASWVGRTKKKNIYVISTLKRPVPL 457
>WB|WBGene00012342 [details] [associations]
symbol:mtr-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
Pfam:PF13234 Uniprot:Q23223
Length = 1026
Score = 113 (44.8 bits), Expect = 0.00092, Sum P(2) = 0.00091
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 294 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYG 344
VL A++ MGLN+ ++F++ +KFDG + R +T E Q+AGRAGR G
Sbjct: 465 VLFATETFSMGLNMPARTVVFTSARKFDGSDNRYITSGEYIQMAGRAGRRG 515
Score = 57 (25.1 bits), Expect = 0.00092, Sum P(2) = 0.00091
Identities = 29/134 (21%), Positives = 57/134 (42%)
Query: 86 TNSGKT---HQALSR-LESSSSGIYCGPLRLLAWEVAKRLNKANVSCDLITGQEREEVDG 141
T++GKT A+++ L IY P++ L+ + + L + L+TG D
Sbjct: 149 TSAGKTVVATYAIAKCLREKQRVIYTSPIKALSNQKYRELEEEFKDVGLMTGDVTLNPD- 207
Query: 142 AKHRAVTVEM--------ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLC 193
A +T E+ ++++ + V DEI + K RG + ++ + + +
Sbjct: 208 ASCLVMTTEILRSMLYRGSEIMKEVGWVVYDEIHYMRDKERGVVWEETII-LMSKNIKQA 266
Query: 194 GDPAAVPLIQQILQ 207
A +P +Q Q
Sbjct: 267 FLSATIPNARQFAQ 280
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 564 552 0.00097 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 617 (66 KB)
Total size of DFA: 299 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.32u 0.13s 44.45t Elapsed: 00:00:02
Total cpu time: 44.33u 0.13s 44.46t Elapsed: 00:00:02
Start: Thu May 9 20:28:01 2013 End: Thu May 9 20:28:03 2013